-- dump date 20140620_053903 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 1267753000001 SEQ_END SEQ_END NC_020306.1 24012 24012 DR NC_020306.1; contig end 24012..24012 Salmonella enterica subsp. enterica serovar Javiana str. 1267753000002 SEQ_END SEQ_END NC_020307.1 4634161 4634161 DR NC_020307.1; contig end 4634161..4634161 Salmonella enterica subsp. enterica serovar Javiana str. 1267753000003 SEQ_END SEQ_END NC_020308.1 17094 17094 DR NC_020308.1; contig end 17094..17094 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469778.1 CDS CFSAN001992_000005 NC_020306.1 24 239 R hypothetical protein complement(24..239) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469779.1 CDS CFSAN001992_00020 NC_020306.1 1656 2078 R COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); Error-prone repair protein UmuD complement(1656..2078) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469780.1 CDS CFSAN001992_00025 NC_020306.1 2256 2927 R COG2135 Uncharacterized conserved protein; hypothetical protein complement(2256..2927) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469781.1 CDS CFSAN001992_00030 NC_020306.1 3287 3574 D YcgB 3287..3574 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469782.1 CDS CFSAN001992_00045 NC_020306.1 5198 5764 D COG1112 Superfamily I DNA and RNA helicases and helicase subunits; hypothetical protein 5198..5764 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469783.1 CDS CFSAN001992_00050 NC_020306.1 5761 6492 D TraX 5761..6492 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469784.1 CDS CFSAN001992_00055 NC_020306.1 6533 6736 D hypothetical protein 6533..6736 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469785.1 CDS CFSAN001992_00060 NC_020306.1 6733 7065 D hypothetical protein 6733..7065 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469786.1 CDS CFSAN001992_00065 NC_020306.1 7062 7370 D hypothetical protein 7062..7370 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469787.1 CDS CFSAN001992_00070 NC_020306.1 7468 8055 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; Endonuclease 7468..8055 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469788.1 CDS CFSAN001992_00075 NC_020306.1 8171 8437 D replication protein 8171..8437 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469789.1 CDS CFSAN001992_00080 NC_020306.1 8664 8741 D TapA protein 8664..8741 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469790.1 CDS CFSAN001992_00085 NC_020306.1 8734 9513 D replication initiation protein RepZ 8734..9513 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469791.1 CDS CFSAN001992_00090 NC_020306.1 9594 9725 D replication initiation protein, IncFII putative 9594..9725 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469792.1 CDS CFSAN001992_00095 NC_020306.1 11092 11340 R hypothetical protein complement(11092..11340) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469793.1 CDS CFSAN001992_00100 NC_020306.1 11497 11796 D hypothetical protein 11497..11796 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469794.1 CDS CFSAN001992_00105 NC_020306.1 12709 13518 D hypothetical protein 12709..13518 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469795.1 CDS CFSAN001992_00110 NC_020306.1 13538 14095 D hypothetical protein 13538..14095 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469796.1 CDS CFSAN001992_00115 NC_020306.1 14148 16457 D hypothetical protein 14148..16457 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469797.1 CDS CFSAN001992_00120 NC_020306.1 16481 17668 D hypothetical protein 16481..17668 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469798.1 CDS CFSAN001992_00125 NC_020306.1 17892 18239 R COG2963 Transposase and inactivated derivatives; putative transposase complement(17892..18239) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469799.1 CDS CFSAN001992_00130 NC_020306.1 18443 19282 D COG2207 AraC-type DNA-binding domain-containing proteins; HTH-type transcriptional regulator ykgA 18443..19282 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469800.1 CDS CFSAN001992_00135 NC_020306.1 19544 20317 D COG2200 FOG: EAL domain; diguanylate phosphodiesterase 19544..20317 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469801.1 CDS CFSAN001992_00140 NC_020306.1 20580 21128 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two component transcriptional regulator 20580..21128 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469802.1 CDS CFSAN001992_00145 NC_020306.1 21379 22023 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; response regulator 21379..22023 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469803.1 CDS CFSAN001992_00160 NC_020307.1 4633468 395 D COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component; heme ABC exporter ATP-binding protein join(4633468..4634161,1..395) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469804.1 CDS CFSAN001992_00165 NC_020307.1 371 589 D COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component; cytochrome c biogenesis protein CcmA 371..589 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469807.1 CDS CFSAN001992_00180 NC_020307.1 1292 2029 D COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme ABC transporter membrane protein CcmC 1292..2029 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469808.1 CDS CFSAN001992_00185 NC_020307.1 2026 2238 D COG3114 Heme exporter protein D; cytochrome c biogenesis protein CcmD 2026..2238 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469809.1 CDS CFSAN001992_00190 NC_020307.1 2235 2714 D COG2332 Cytochrome c-type biogenesis protein CcmE; cytochrome C biogenesis protein CcmE 2235..2714 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469810.1 CDS CFSAN001992_00195 NC_020307.1 2711 4642 D COG1138 Cytochrome c biogenesis factor; heme lyase subunit CcmF 2711..4642 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469811.1 CDS CFSAN001992_00200 NC_020307.1 4639 5196 D COG0526 Thiol-disulfide isomerase and thioredoxins; thiol:disulfide interchange protein DsbE 4639..5196 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469812.1 CDS CFSAN001992_00205 NC_020307.1 5193 6236 D COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; heme lyase subunit CcmH 5193..6236 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469813.1 CDS CFSAN001992_00210 NC_020307.1 6280 6927 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional regulator NarP complement(6280..6927) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469814.1 CDS CFSAN001992_00215 NC_020307.1 7751 8308 D outer membrane protein 7751..8308 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469815.1 CDS CFSAN001992_00220 NC_020307.1 8501 8704 R MsgA-like virulence protein complement(8501..8704) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469816.1 CDS CFSAN001992_00225 NC_020307.1 8896 10656 R COG3083 Predicted hydrolase of alkaline phosphatase superfamily; Inner membrane protein yejM complement(8896..10656) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469817.1 CDS CFSAN001992_00230 NC_020307.1 10688 10915 R COG3082 Uncharacterized protein conserved in bacteria; hypothetical protein complement(10688..10915) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469818.1 CDS CFSAN001992_00235 NC_020307.1 11095 12102 D COG3081 Nucleoid-associated protein; nucleoid-associated protein NdpA 11095..12102 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469819.1 CDS CFSAN001992_00240 NC_020307.1 12223 12507 R COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25 complement(12223..12507) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469820.1 CDS CFSAN001992_00245 NC_020307.1 12632 14392 R COG1061 DNA or RNA helicases of superfamily II; helicase complement(12632..14392) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469821.1 CDS CFSAN001992_00250 NC_020307.1 14544 15239 D COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 16S rRNA pseudouridylate synthase A 14544..15239 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469822.1 CDS CFSAN001992_00255 NC_020307.1 15267 16457 D COG0477 Permeases of the major facilitator superfamily; bicyclomycin/multidrug efflux system 15267..16457 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469823.1 CDS CFSAN001992_00260 NC_020307.1 16848 17192 D hypothetical protein 16848..17192 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469824.1 CDS CFSAN001992_00265 NC_020307.1 17196 18785 R COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; microcin C ABC transporter ATP-binding protein YejF complement(17196..18785) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469825.1 CDS CFSAN001992_00270 NC_020307.1 18787 19812 R COG4239 ABC-type uncharacterized transport system, permease component; microcin C ABC transporter permease complement(18787..19812) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469826.1 CDS CFSAN001992_00275 NC_020307.1 19812 20906 R COG4174 ABC-type uncharacterized transport system, permease component; microcin C ABC transporter permease YejB complement(19812..20906) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469827.1 CDS CFSAN001992_00280 NC_020307.1 20916 22721 R COG4166 ABC-type oligopeptide transport system, periplasmic component; microcin C ABC transporter periplasmic binding protein YejA complement(20916..22721) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469828.1 CDS CFSAN001992_00285 NC_020307.1 22828 24384 R COG2200 FOG: EAL domain; phage resistance protein complement(22828..24384) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469829.1 CDS spr NC_020307.1 24710 25282 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); outer membrane lipoprotein complement(24710..25282) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469830.1 CDS CFSAN001992_00295 NC_020307.1 25696 26415 R COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein complement(25696..26415) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469831.1 CDS CFSAN001992_00300 NC_020307.1 26445 27431 R COG0523 Putative GTPases (G3E family); hypothetical protein complement(26445..27431) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469832.1 CDS CFSAN001992_00305 NC_020307.1 27643 28215 R COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P complement(27643..28215) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469833.1 CDS CFSAN001992_00310 NC_020307.1 28540 28794 D COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 28540..28794 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469834.1 CDS CFSAN001992_00315 NC_020307.1 29306 29971 D COG1115 Na+/alanine symporter; hypothetical protein 29306..29971 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469835.1 CDS CFSAN001992_00320 NC_020307.1 30036 31217 R COG0477 Permeases of the major facilitator superfamily; sugar efflux transporter B complement(30036..31217) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469836.1 CDS CFSAN001992_00325 NC_020307.1 31411 31557 D hypothetical protein 31411..31557 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469837.1 CDS CFSAN001992_00330 NC_020307.1 31588 32718 D COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein 31588..32718 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469838.1 CDS fruK NC_020307.1 32718 33656 D COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); 1-phosphofructokinase 32718..33656 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469839.1 CDS CFSAN001992_00340 NC_020307.1 33673 35361 D COG3925 N-terminal domain of the phosphotransferase system fructose-specific component IIB; PTS system fructose-specific transporter subunits IIBC 33673..35361 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469840.1 CDS CFSAN001992_00345 NC_020307.1 35426 36283 R COG0648 Endonuclease IV; endonuclease IV complement(35426..36283) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469841.1 CDS CFSAN001992_00350 NC_020307.1 36362 37411 R COG2855 Predicted membrane protein; hypothetical protein complement(36362..37411) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469842.1 CDS CFSAN001992_00355 NC_020307.1 37532 38395 D COG0583 Transcriptional regulator; DNA-binding transcriptional regulator 37532..38395 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469843.1 CDS CFSAN001992_00360 NC_020307.1 38585 40054 D COG0833 Amino acid transporters; lysine transporter 38585..40054 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469844.1 CDS CFSAN001992_00365 NC_020307.1 40399 42390 D COG4771 Outer membrane receptor for ferrienterochelin and colicins; catecholate siderophore receptor CirA 40399..42390 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469845.1 CDS CFSAN001992_00370 NC_020307.1 42434 43756 R COG2271 Sugar phosphate permease; regulatory protein UhpC complement(42434..43756) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469846.1 CDS CFSAN001992_00375 NC_020307.1 43789 44676 R COG0560 Phosphoserine phosphatase; hydrolase complement(43789..44676) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469847.1 CDS CFSAN001992_00380 NC_020307.1 44893 46260 D COG1760 L-serine deaminase; L-serine dehydratase 44893..46260 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469848.1 CDS CFSAN001992_00385 NC_020307.1 46265 46654 D COG1396 Predicted transcriptional regulators; putative DNA-binding protein 46265..46654 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469849.1 CDS CFSAN001992_00390 NC_020307.1 46643 47500 R COG0627 Predicted esterase; S-formylglutathione hydrolase complement(46643..47500) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469850.1 CDS folE NC_020307.1 47830 48498 D COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I 47830..48498 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469851.1 CDS CFSAN001992_00400 NC_020307.1 48513 49655 D COG2311 Predicted membrane protein; hypothetical protein 48513..49655 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469852.1 CDS CFSAN001992_00405 NC_020307.1 49805 50827 D COG1609 Transcriptional regulators; DNA-binding transcriptional regulator GalS 49805..50827 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469853.1 CDS CFSAN001992_00410 NC_020307.1 51326 52324 D COG1879 ABC-type sugar transport system, periplasmic component; methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB 51326..52324 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469854.1 CDS CFSAN001992_00415 NC_020307.1 52458 53978 D COG1129 ABC-type sugar transport system, ATPase component; galactose/methyl galaxtoside transporter ATP-binding protein 52458..53978 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469855.1 CDS mglC NC_020307.1 53994 55004 D COG4211 ABC-type glucose/galactose transport system, permease component; beta-methylgalactoside transporter inner membrane component 53994..55004 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469856.1 CDS CFSAN001992_00425 NC_020307.1 55079 56314 R COG0167 Dihydroorotate dehydrogenase; dihydropyrimidine dehydrogenase subunit B complement(55079..56314) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469857.1 CDS CFSAN001992_00430 NC_020307.1 56308 57549 R COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; dihydropyrimidine dehydrogenase subunit A complement(56308..57549) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469858.1 CDS CFSAN001992_00435 NC_020307.1 57754 57993 R hypothetical protein complement(57754..57993) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469859.1 CDS CFSAN001992_00440 NC_020307.1 57996 58715 R COG2949 Uncharacterized membrane protein; vancomycin high temperature exclusion protein complement(57996..58715) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469860.1 CDS CFSAN001992_00445 NC_020307.1 58892 59776 R COG0295 Cytidine deaminase; cytidine deaminase complement(58892..59776) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469861.1 CDS CFSAN001992_00450 NC_020307.1 59930 60625 R COG1346 Putative effector of murein hydrolase; hypothetical protein complement(59930..60625) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469862.1 CDS CFSAN001992_00455 NC_020307.1 60622 61020 R COG1380 Putative effector of murein hydrolase LrgA; hypothetical protein complement(60622..61020) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469863.1 CDS CFSAN001992_00460 NC_020307.1 61152 62060 R COG0583 Transcriptional regulator; putative RuBisCO transcriptional regulator complement(61152..62060) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469864.1 CDS CFSAN001992_00465 NC_020307.1 62186 63544 D COG0477 Permeases of the major facilitator superfamily; 4-hydroxybenzoate transporter 62186..63544 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469865.1 CDS CFSAN001992_00470 NC_020307.1 63556 64593 D COG3435 Gentisate 1,2-dioxygenase; gentisate 1,2-dioxygenase 63556..64593 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469866.1 CDS CFSAN001992_00475 NC_020307.1 64609 65310 D COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway); Fumarylacetoacetate hydrolase domain-containing protein 1 64609..65310 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469867.1 CDS CFSAN001992_00480 NC_020307.1 65319 65963 D COG0625 Glutathione S-transferase; glutathione-S-transferase-family protein 65319..65963 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469868.1 CDS CFSAN001992_00485 NC_020307.1 65978 67171 D COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; salicylate hydroxylase 65978..67171 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469869.1 CDS CFSAN001992_00490 NC_020307.1 67280 68218 D COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase C 67280..68218 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469870.1 CDS CFSAN001992_00495 NC_020307.1 68276 68359 R hypothetical protein complement(68276..68359) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469871.1 CDS CFSAN001992_00500 NC_020307.1 68677 70113 D COG1538 Outer membrane protein; multidrug resistance outer membrane protein MdtQ 68677..70113 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469872.1 CDS CFSAN001992_00505 NC_020307.1 70179 70940 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase 70179..70940 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469873.1 CDS CFSAN001992_00510 NC_020307.1 70989 71558 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(70989..71558) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469874.1 CDS CFSAN001992_00515 NC_020307.1 71717 72304 D inner membrane protein 71717..72304 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469875.1 CDS pbpG NC_020307.1 72470 73417 D COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine endopeptidase 72470..73417 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469876.1 CDS CFSAN001992_00525 NC_020307.1 73475 75205 R COG0277 FAD/FMN-containing dehydrogenases; D-lactate dehydrogenase complement(73475..75205) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469877.1 CDS CFSAN001992_00530 NC_020307.1 75472 77769 D COG1472 Beta-glucosidase-related glycosidases; beta-D-glucoside glucohydrolase 75472..77769 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469878.1 CDS CFSAN001992_00535 NC_020307.1 77950 78867 D COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein); amine ABC transporter periplasmic amine-binding protein 77950..78867 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469879.1 CDS CFSAN001992_00540 NC_020307.1 78871 80040 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; putative ABC-type proline/glycine betaine transport system permease component 78871..80040 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469880.1 CDS CFSAN001992_00545 NC_020307.1 80033 80980 D COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; Methionine import ATP-binding protein metN 80033..80980 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469881.1 CDS CFSAN001992_00550 NC_020307.1 80964 81695 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; Glycine betaine/carnitine/choline transport system permease protein opuCB 80964..81695 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469882.1 CDS CFSAN001992_00555 NC_020307.1 81676 81783 R hypothetical protein complement(81676..81783) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469883.1 CDS CFSAN001992_00560 NC_020307.1 81843 82574 R COG0789 Predicted transcriptional regulators; transcriptional regulator MirA complement(81843..82574) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469884.1 CDS CFSAN001992_00565 NC_020307.1 82799 84484 D COG3275 Putative regulator of cell autolysis; two-component system sensor kinase 82799..84484 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469885.1 CDS CFSAN001992_00570 NC_020307.1 84481 85200 D COG3279 Response regulator of the LytR/AlgR family; two-component response-regulatory protein YehT 84481..85200 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469886.1 CDS CFSAN001992_00575 NC_020307.1 85247 85714 D COG4807 Uncharacterized protein conserved in bacteria; hypothetical protein 85247..85714 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469887.1 CDS CFSAN001992_00580 NC_020307.1 85771 86301 R COG4808 Uncharacterized protein conserved in bacteria; hypothetical protein complement(85771..86301) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469888.1 CDS CFSAN001992_00585 NC_020307.1 86473 86931 R COG4808 Uncharacterized protein conserved in bacteria; hypothetical protein complement(86473..86931) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469889.1 CDS metG NC_020307.1 87172 89205 R COG0143 Methionyl-tRNA synthetase; methionyl-tRNA ligase complement(87172..89205) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469890.1 CDS CFSAN001992_00595 NC_020307.1 89370 90479 D COG0489 ATPases involved in chromosome partitioning; antiporter inner membrane protein 89370..90479 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469891.1 CDS CFSAN001992_00600 NC_020307.1 90757 91038 D hypothetical protein 90757..91038 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469892.1 CDS CFSAN001992_00605 NC_020307.1 91318 91851 D fimbrial chaperone protein 91318..91851 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469893.1 CDS CFSAN001992_00610 NC_020307.1 91913 92593 D COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone protein PegB 91913..92593 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469894.1 CDS CFSAN001992_00615 NC_020307.1 92622 95108 D COG3188 P pilus assembly protein, porin PapC; fimbrial outer membrane usher protein 92622..95108 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469895.1 CDS CFSAN001992_00620 NC_020307.1 95124 96146 D fimbrial biosynthesis regulatory protein 95124..96146 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469896.1 CDS CFSAN001992_00625 NC_020307.1 96190 96504 R COG5455 Predicted integral membrane protein; hypothetical protein complement(96190..96504) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469897.1 CDS CFSAN001992_00630 NC_020307.1 96914 97711 D COG2145 Hydroxyethylthiazole kinase, sugar kinase family; hydroxyethylthiazole kinase 96914..97711 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469898.1 CDS CFSAN001992_00635 NC_020307.1 97698 98498 D COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase 97698..98498 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469899.1 CDS CFSAN001992_00640 NC_020307.1 98535 99281 D COG2188 Transcriptional regulators; GntR family transcriptional regulator 98535..99281 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469900.1 CDS CFSAN001992_00645 NC_020307.1 99255 100220 R COG0524 Sugar kinases, ribokinase family; sugar kinase complement(99255..100220) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469901.1 CDS CFSAN001992_00650 NC_020307.1 100217 101221 R COG1397 ADP-ribosylglycohydrolase; ADP-ribosylglycohydrolase family protein complement(100217..101221) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469902.1 CDS CFSAN001992_00655 NC_020307.1 101218 102489 R COG0477 Permeases of the major facilitator superfamily; Putative nucleoside transporter YegT complement(101218..102489) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469903.1 CDS CFSAN001992_00660 NC_020307.1 102743 103795 D COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes; fructose-bisphosphate aldolase 102743..103795 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469904.1 CDS CFSAN001992_00665 NC_020307.1 103848 104747 R COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase; lipid kinase complement(103848..104747) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469905.1 CDS CFSAN001992_00670 NC_020307.1 105766 106182 D putative cytoplasmic protein 105766..106182 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469906.1 CDS CFSAN001992_00675 NC_020307.1 106141 106332 R hypothetical protein complement(106141..106332) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469907.1 CDS CFSAN001992_00680 NC_020307.1 106822 108183 R COG0826 Collagenase and related proteases; protease complement(106822..108183) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469908.1 CDS CFSAN001992_00685 NC_020307.1 108347 108964 D hypothetical protein 108347..108964 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469909.1 CDS CFSAN001992_00690 NC_020307.1 108957 109904 D hypothetical protein 108957..109904 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469910.1 CDS CFSAN001992_00695 NC_020307.1 110077 110424 D hypothetical protein 110077..110424 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469911.1 CDS CFSAN001992_00700 NC_020307.1 111879 112313 D hypothetical protein 111879..112313 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469912.1 CDS CFSAN001992_00705 NC_020307.1 112533 113069 D hypothetical protein 112533..113069 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469913.1 CDS CFSAN001992_00710 NC_020307.1 113137 113565 D hypothetical protein 113137..113565 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469914.1 CDS CFSAN001992_00715 NC_020307.1 113634 114236 D hypothetical protein 113634..114236 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469915.1 CDS CFSAN001992_00720 NC_020307.1 114463 114825 D hypothetical protein 114463..114825 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469916.1 CDS CFSAN001992_00725 NC_020307.1 115169 115714 D hypothetical protein 115169..115714 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469917.1 CDS CFSAN001992_00740 NC_020307.1 116567 118678 R hypothetical protein complement(116567..118678) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469918.1 CDS CFSAN001992_00755 NC_020307.1 119406 120608 R COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; cytoplasmic protein complement(119406..120608) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469919.1 CDS CFSAN001992_00760 NC_020307.1 120877 121599 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator BaeR complement(120877..121599) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469920.1 CDS CFSAN001992_00765 NC_020307.1 121596 122999 R COG0642 Signal transduction histidine kinase; signal transduction histidine-protein kinase BaeS complement(121596..122999) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469921.1 CDS CFSAN001992_00770 NC_020307.1 122999 124411 R COG0477 Permeases of the major facilitator superfamily; transporter complement(122999..124411) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469922.1 CDS CFSAN001992_00775 NC_020307.1 124408 126669 R COG0841 Cation/multidrug efflux pump; multidrug efflux system subunit MdtC complement(124408..126669) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469923.1 CDS CFSAN001992_00780 NC_020307.1 126783 127487 R COG0841 Cation/multidrug efflux pump; multidrug efflux system subunit MdtC complement(126783..127487) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469924.1 CDS CFSAN001992_00785 NC_020307.1 127488 130610 R COG0841 Cation/multidrug efflux pump; multidrug efflux system subunit MdtB complement(127488..130610) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469925.1 CDS CFSAN001992_00790 NC_020307.1 130610 131848 R COG0845 Membrane-fusion protein; multidrug efflux system subunit MdtA complement(130610..131848) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469926.1 CDS CFSAN001992_00795 NC_020307.1 132289 133641 R COG0443 Molecular chaperone; chaperone complement(132289..133641) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469927.1 CDS CFSAN001992_00800 NC_020307.1 133775 134644 D COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; 3-methyl-adenine DNA glycosylase II 133775..134644 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469928.1 CDS CFSAN001992_00805 NC_020307.1 134612 137602 R COG2202 FOG: PAS/PAC domain; mase1 domain family protein complement(134612..137602) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469929.1 CDS CFSAN001992_00810 NC_020307.1 137933 138574 D COG0572 Uridine kinase; uridine/cytidine kinase 137933..138574 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469930.1 CDS dcd NC_020307.1 138665 139246 D COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase 138665..139246 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469931.1 CDS CFSAN001992_00820 NC_020307.1 139285 141141 D COG2982 Uncharacterized protein involved in outer membrane biogenesis; assembly protein 139285..141141 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469932.1 CDS CFSAN001992_00825 NC_020307.1 141227 142807 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; Putative capsular polysaccharide transport protein YegH complement(141227..142807) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469933.1 CDS CFSAN001992_00830 NC_020307.1 143482 144621 D COG1596 Periplasmic protein involved in polysaccharide export; polysaccharide export protein Wza 143482..144621 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469934.1 CDS CFSAN001992_00835 NC_020307.1 144627 145076 D COG0394 Protein-tyrosine-phosphatase; tyrosine phosphatase 144627..145076 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469935.1 CDS CFSAN001992_00840 NC_020307.1 145073 147232 D COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; tyrosine kinase 145073..147232 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469936.1 CDS CFSAN001992_00845 NC_020307.1 147319 148161 D COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyl transferase 147319..148161 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469937.1 CDS CFSAN001992_00850 NC_020307.1 148164 148652 D COG1045 Serine acetyltransferase; acyl transferase 148164..148652 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469938.1 CDS CFSAN001992_00855 NC_020307.1 148649 149866 D COG0438 Glycosyltransferase; glycosyl transferase 148649..149866 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469939.1 CDS wcaD NC_020307.1 149841 151055 D colanic acid biosynthesis protein 149841..151055 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469940.1 CDS CFSAN001992_00865 NC_020307.1 151068 151814 D COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyl transferase 151068..151814 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469941.1 CDS CFSAN001992_00870 NC_020307.1 151830 152384 D COG0110 Acetyltransferase (isoleucine patch superfamily); acyl transferase 151830..152384 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469942.1 CDS CFSAN001992_00875 NC_020307.1 152408 153529 D COG1089 GDP-D-mannose dehydratase; GDP-mannose 4,6-dehydratase 152408..153529 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469943.1 CDS CFSAN001992_00880 NC_020307.1 153532 154497 D COG0451 Nucleoside-diphosphate-sugar epimerases; GDP-fucose synthetase 153532..154497 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469944.1 CDS CFSAN001992_00885 NC_020307.1 154500 154973 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; GDP-mannose mannosyl hydrolase NudD 154500..154973 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469945.1 CDS CFSAN001992_00890 NC_020307.1 154970 156193 D COG0438 Glycosyltransferase; glycosyl transferase 154970..156193 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469946.1 CDS cpsB NC_020307.1 156196 157632 D COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanyltransferase 156196..157632 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469947.1 CDS CFSAN001992_00900 NC_020307.1 157743 159113 D COG1109 Phosphomannomutase; phosphomannomutase CpsG 157743..159113 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469950.1 CDS CFSAN001992_00915 NC_020307.1 160692 162170 D COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; colanic acid exporter 160692..162170 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469951.1 CDS CFSAN001992_00920 NC_020307.1 162192 163472 D COG2327 Uncharacterized conserved protein; colanic acid biosynthesis protein 162192..163472 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469952.1 CDS CFSAN001992_00925 NC_020307.1 163469 164689 D COG0438 Glycosyltransferase; colanic acid biosynthesis glycosyltransferase WcaL 163469..164689 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469953.1 CDS wcaM NC_020307.1 164700 166103 D colanic acid biosynthesis protein 164700..166103 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469954.1 CDS CFSAN001992_00935 NC_020307.1 166281 167174 D COG1210 UDP-glucose pyrophosphorylase; GalU regulator GalF 166281..167174 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469955.1 CDS CFSAN001992_00940 NC_020307.1 167551 168636 D COG1088 dTDP-D-glucose 4,6-dehydratase; dTDP-glucose 4,6 dehydratase 167551..168636 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469956.1 CDS CFSAN001992_00945 NC_020307.1 168636 169535 D COG1091 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 168636..169535 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469957.1 CDS CFSAN001992_00950 NC_020307.1 169583 170461 D COG1209 dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase RfbA 169583..170461 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469958.1 CDS CFSAN001992_00955 NC_020307.1 170465 171013 D COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes; dTDP-4-dehydrorhamnose 3,5-epimerase 170465..171013 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469959.1 CDS CFSAN001992_00960 NC_020307.1 171019 171993 D COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; CDP-6-deoxy-delta-3,4-glucoseen reductase 171019..171993 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469960.1 CDS CFSAN001992_00965 NC_020307.1 172009 172782 D COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); glucose-1-phosphate cytidylyltransferase 172009..172782 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469961.1 CDS CFSAN001992_00970 NC_020307.1 172787 173866 D COG0451 Nucleoside-diphosphate-sugar epimerases; CDP-glucose 4,6-dehydratase 172787..173866 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469962.1 CDS CFSAN001992_00975 NC_020307.1 173893 175206 D COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; lipopolysaccharide biosynthesis protein RfbH 173893..175206 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469963.1 CDS CFSAN001992_00980 NC_020307.1 175243 176082 D COG0451 Nucleoside-diphosphate-sugar epimerases; paratose synthase 175243..176082 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469964.1 CDS CFSAN001992_00985 NC_020307.1 176079 177095 D COG0451 Nucleoside-diphosphate-sugar epimerases; CDP-tyvelose-2-epimerase 176079..177095 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469965.1 CDS CFSAN001992_00990 NC_020307.1 177166 178464 D O-antigen transporter 177166..178464 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469966.1 CDS CFSAN001992_00995 NC_020307.1 178466 179467 D COG0463 Glycosyltransferases involved in cell wall biogenesis; O-chain glycosyltransferase 178466..179467 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469967.1 CDS CFSAN001992_01000 NC_020307.1 180042 181103 D COG0438 Glycosyltransferase; mannosyl transferase 180042..181103 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469968.1 CDS CFSAN001992_01005 NC_020307.1 181104 182048 D COG0463 Glycosyltransferases involved in cell wall biogenesis; O antigen biosynthesis rhamnosyltransferase 181104..182048 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469969.1 CDS CFSAN001992_01010 NC_020307.1 182049 183488 D COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase 182049..183488 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469970.1 CDS CFSAN001992_01015 NC_020307.1 183475 184908 D COG1109 Phosphomannomutase; phosphomannomutase 183475..184908 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469971.1 CDS CFSAN001992_01020 NC_020307.1 184980 186410 D COG2148 Sugar transferases involved in lipopolysaccharide synthesis; undecaprenyl-phosphate galactose phosphotransferase 184980..186410 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469972.1 CDS CFSAN001992_01025 NC_020307.1 186574 187980 D COG0362 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 186574..187980 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469973.1 CDS CFSAN001992_01030 NC_020307.1 188217 189383 D COG1004 Predicted UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 188217..189383 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469974.1 CDS CFSAN001992_01035 NC_020307.1 189526 190509 D COG3765 Chain length determinant protein; chain length determinant protein WzzB 189526..190509 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469975.1 CDS CFSAN001992_01040 NC_020307.1 190604 191215 R COG0139 Phosphoribosyl-AMP cyclohydrolase; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein complement(190604..191215) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469976.1 CDS CFSAN001992_01045 NC_020307.1 191209 191985 R COG0107 Imidazoleglycerol-phosphate synthase; imidazole glycerol phosphate synthase subunit HisF complement(191209..191985) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469977.1 CDS CFSAN001992_01050 NC_020307.1 191967 192704 R COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(191967..192704) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469978.1 CDS hisH NC_020307.1 192704 193294 R COG0118 Glutamine amidotransferase; imidazole glycerol phosphate synthase subunit HisH complement(192704..193294) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469979.1 CDS CFSAN001992_01060 NC_020307.1 193294 194361 R COG0241 Histidinol phosphatase and related phosphatases; imidazole glycerol-phosphate dehydratase/histidinol phosphatase complement(193294..194361) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469980.1 CDS CFSAN001992_01065 NC_020307.1 194358 195437 R COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; histidinol-phosphate aminotransferase complement(194358..195437) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469981.1 CDS hisD NC_020307.1 195434 196738 R COG0141 Histidinol dehydrogenase; bifunctional histidinal dehydrogenase/ histidinol dehydrogenase complement(195434..196738) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469982.1 CDS hisG NC_020307.1 196841 197740 R COG0040 ATP phosphoribosyltransferase; ATP phosphoribosyltransferase complement(196841..197740) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469983.1 CDS CFSAN001992_01080 NC_020307.1 198099 198923 D COG0451 Nucleoside-diphosphate-sugar epimerases; UDP-glucose 4-epimerase UDP-galactose 4-epimerase , Galactowaldenase 198099..198923 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469984.1 CDS CFSAN001992_01085 NC_020307.1 198969 199883 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 198969..199883 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469985.1 CDS CFSAN001992_01090 NC_020307.1 200169 201527 D COG0531 Amino acid transporters; amino acid permease 200169..201527 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469986.1 CDS sbcB NC_020307.1 201663 203093 R COG2925 Exonuclease I; exonuclease I complement(201663..203093) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469987.1 CDS CFSAN001992_01100 NC_020307.1 203436 204983 R E3 ubiquitin-protein ligase SopA complement(203436..204983) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469988.1 CDS CFSAN001992_01105 NC_020307.1 206013 206159 D COG0393 Uncharacterized conserved protein; hypothetical protein 206013..206159 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469989.1 CDS CFSAN001992_01110 NC_020307.1 206404 208680 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; thiosulfate reductase PhsA 206404..208680 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469990.1 CDS CFSAN001992_01115 NC_020307.1 208695 209273 D COG0437 Fe-S-cluster-containing hydrogenase components 1; (4Fe-4S)-binding protein 208695..209273 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469991.1 CDS CFSAN001992_01120 NC_020307.1 209270 210034 D COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein); thiosulfate reductase cytochrome B subunit 209270..210034 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469992.1 CDS dacD NC_020307.1 210164 211330 D COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase 210164..211330 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469993.1 CDS CFSAN001992_01130 NC_020307.1 211481 211984 D COG3449 DNA gyrase inhibitor; DNA gyrase inhibitor 211481..211984 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469994.1 CDS CFSAN001992_01135 NC_020307.1 212062 213120 D COG1289 Predicted membrane protein; inner membrane protein YeeA 212062..213120 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469995.1 CDS CFSAN001992_01140 NC_020307.1 213365 213700 D COG2926 Uncharacterized protein conserved in bacteria; hypothetical protein 213365..213700 Salmonella enterica subsp. enterica serovar Javiana str. YP_007469996.1 CDS CFSAN001992_01145 NC_020307.1 213734 214636 R COG4542 Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase; propanediol utilization complement(213734..214636) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469997.1 CDS CFSAN001992_01150 NC_020307.1 214694 215845 R COG0282 Acetate kinase; propionate kinase complement(214694..215845) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469998.1 CDS CFSAN001992_01155 NC_020307.1 215892 216344 R COG4917 Ethanolamine utilization protein; propanediol utilization protein PduV complement(215892..216344) Salmonella enterica subsp. enterica serovar Javiana str. YP_007469999.1 CDS CFSAN001992_01160 NC_020307.1 216349 216699 R COG4810 Ethanolamine utilization protein; Propanediol utilization protein pduU complement(216349..216699) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470000.1 CDS CFSAN001992_01165 NC_020307.1 216699 217253 R COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; polyhedral body protein complement(216699..217253) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470001.1 CDS CFSAN001992_01170 NC_020307.1 217256 218611 R COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC; propanediol utilization polyhedral body protein complement(217256..218611) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470002.1 CDS CFSAN001992_01175 NC_020307.1 218608 219720 R COG1454 Alcohol dehydrogenase, class IV; propanol dehydrogenase complement(218608..219720) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470003.1 CDS CFSAN001992_01180 NC_020307.1 219732 221126 R COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase EutE complement(219732..221126) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470004.1 CDS CFSAN001992_01185 NC_020307.1 221123 222133 R COG2096 Uncharacterized conserved protein; hypothetical protein complement(221123..222133) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470005.1 CDS CFSAN001992_01190 NC_020307.1 222143 222418 R COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; Ethanolamine utilization protein eutN complement(222143..222418) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470006.1 CDS CFSAN001992_01195 NC_020307.1 222422 222913 R propanediol utilization protein PduM complement(222422..222913) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470007.1 CDS CFSAN001992_01200 NC_020307.1 222910 223542 R COG4869 Propanediol utilization protein; propanediol utilization phosphotransacylase complement(222910..223542) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470008.1 CDS CFSAN001992_01205 NC_020307.1 223542 224003 R COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; polyhedral body protein complement(223542..224003) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470009.1 CDS CFSAN001992_01210 NC_020307.1 224028 224303 R COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; hypothetical protein complement(224028..224303) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470010.1 CDS CFSAN001992_01215 NC_020307.1 224323 224673 R hypothetical protein complement(224323..224673) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470011.1 CDS CFSAN001992_01220 NC_020307.1 224663 226495 R COG0183 Acetyl-CoA acetyltransferase; PduG protein complement(224663..226495) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470012.1 CDS pduE NC_020307.1 226511 227032 R COG4910 Propanediol dehydratase, small subunit; propanediol dehydratase small subunit complement(226511..227032) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470013.1 CDS pduD NC_020307.1 227047 227721 R COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit; propanediol dehydratase medium subunit complement(227047..227721) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470014.1 CDS pduC NC_020307.1 227732 229396 R COG4909 Propanediol dehydratase, large subunit; propanediol dehydratase large subunit complement(227732..229396) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470015.1 CDS CFSAN001992_01240 NC_020307.1 229415 230227 R COG4816 Ethanolamine utilization protein; propanediol utilization protein PduB complement(229415..230227) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470016.1 CDS CFSAN001992_01245 NC_020307.1 230224 230508 R COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; hypothetical protein complement(230224..230508) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470017.1 CDS CFSAN001992_01250 NC_020307.1 231033 231827 D COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); propanediol utilization propanediol diffusion facilitator 231033..231827 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470018.1 CDS CFSAN001992_01255 NC_020307.1 232044 232955 D COG4936 Predicted sensor domain; regulatory protein PocR 232044..232955 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470019.1 CDS CFSAN001992_01260 NC_020307.1 233553 234932 D COG1797 Cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 233553..234932 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470020.1 CDS CFSAN001992_01265 NC_020307.1 234929 235888 D COG1270 Cobalamin biosynthesis protein CobD/CbiB; cobalamin biosynthesis protein 234929..235888 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470021.1 CDS cbiC NC_020307.1 235899 236531 D COG2082 Precorrin isomerase; cobalt-precorrin-8X methylmutase 235899..236531 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470022.1 CDS cbiD NC_020307.1 236531 237670 D COG1903 Cobalamin biosynthesis protein CbiD; cobalt-precorrin-6A synthase 236531..237670 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470023.1 CDS CFSAN001992_01280 NC_020307.1 237664 238269 D COG2241 Precorrin-6B methylase 1; cobalt-precorrin-6Y C(5)-methyltransferase 237664..238269 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470024.1 CDS CFSAN001992_01285 NC_020307.1 238259 238837 D COG2242 Precorrin-6B methylase 2; cobalt-precorrin-6Y C(15)-methyltransferase 238259..238837 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470025.1 CDS cbiF NC_020307.1 238821 239594 D COG2875 Precorrin-4 methylase; cobalt-precorrin-4 C(11)-methyltransferase 238821..239594 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470026.1 CDS CFSAN001992_01295 NC_020307.1 239575 240630 D COG2073 Cobalamin biosynthesis protein CbiG; cobalamin biosynthesis protein CbiG 239575..240630 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470027.1 CDS cbiH NC_020307.1 240630 241355 D COG1010 Precorrin-3B methylase; cobalt-precorrin-3B C(17)-methyltransferase 240630..241355 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470028.1 CDS CFSAN001992_01305 NC_020307.1 241352 242143 D COG2099 Precorrin-6x reductase; cobalt-precorrin-6x reductase 241352..242143 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470029.1 CDS CFSAN001992_01310 NC_020307.1 242146 242940 D COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase; Sirohydrochlorin cobaltochelatase CbiK 242146..242940 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470030.1 CDS CFSAN001992_01315 NC_020307.1 242937 243650 D COG2243 Precorrin-2 methylase; cobalt-precorrin-2 C(20)-methyltransferase 242937..243650 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470031.1 CDS CFSAN001992_01320 NC_020307.1 243647 244384 D COG0310 ABC-type Co2+ transport system, permease component; cobalt transport protein CbiM 243647..244384 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470032.1 CDS CFSAN001992_01325 NC_020307.1 244386 244667 D COG1930 ABC-type cobalt transport system, periplasmic component; cobalt transport protein CbiN 244386..244667 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470033.1 CDS CFSAN001992_01330 NC_020307.1 244654 245331 D COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; cobalt transport protein CbiQ 244654..245331 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470034.1 CDS cbiO NC_020307.1 245340 246155 D COG1122 ABC-type cobalt transport system, ATPase component; cobalt transporter ATP-binding subunit 245340..246155 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470035.1 CDS CFSAN001992_01340 NC_020307.1 246152 247672 D COG1492 Cobyric acid synthase; cobyric acid synthase 246152..247672 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470036.1 CDS cobU NC_020307.1 247669 248214 D COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 247669..248214 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470037.1 CDS cobS NC_020307.1 248211 248954 D COG0368 Cobalamin-5-phosphate synthase; cobalamin synthase 248211..248954 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470038.1 CDS cobT NC_020307.1 248981 250051 D COG2038 NaMN:DMB phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 248981..250051 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470039.1 CDS CFSAN001992_01360 NC_020307.1 250129 251058 D COG1376 Uncharacterized protein conserved in bacteria; L,D-transpeptidase 250129..251058 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470040.1 CDS CFSAN001992_01365 NC_020307.1 251147 251425 D hypothetical protein 251147..251425 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470041.1 CDS CFSAN001992_01370 NC_020307.1 252646 253596 D COG1982 Arginine/lysine/ornithine decarboxylases; lysine decarboxylase 252646..253596 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470042.1 CDS CFSAN001992_01375 NC_020307.1 253631 255127 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; AMP-binding enzyme 253631..255127 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470043.1 CDS CFSAN001992_01380 NC_020307.1 255250 256212 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; transporter EamA family protein 255250..256212 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470044.1 CDS CFSAN001992_01385 NC_020307.1 256300 257295 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 256300..257295 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470045.1 CDS CFSAN001992_01390 NC_020307.1 257445 258323 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(257445..258323) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470046.1 CDS CFSAN001992_01405 NC_020307.1 260693 261067 D COG0640 Predicted transcriptional regulators; arsenic resistance transcriptional regulator 260693..261067 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470047.1 CDS CFSAN001992_01410 NC_020307.1 261064 261540 D COG0394 Protein-tyrosine-phosphatase; arsenate reductase 261064..261540 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470048.1 CDS CFSAN001992_01415 NC_020307.1 261574 261936 D arsenical resistance operon trans-acting repressor ArsD 261574..261936 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470049.1 CDS CFSAN001992_01420 NC_020307.1 261980 263740 D COG0003 Oxyanion-translocating ATPase; arsenical pump-driving ATPase 261980..263740 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470050.1 CDS CFSAN001992_01425 NC_020307.1 263758 264807 D COG0798 Arsenite efflux pump ACR3 and related permeases; arsenical-resistance protein 263758..264807 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470051.1 CDS CFSAN001992_01430 NC_020307.1 264826 265128 R COG0582 Integrase; integrase complement(264826..265128) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470052.1 CDS CFSAN001992_01445 NC_020307.1 268080 268406 D putative cytoplasmic protein 268080..268406 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470053.1 CDS CFSAN001992_01450 NC_020307.1 268602 270056 D COG0775 Nucleoside phosphorylase; AMP nucleosidase 268602..270056 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470054.1 CDS CFSAN001992_01455 NC_020307.1 270170 270259 R hypothetical protein complement(270170..270259) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470055.1 CDS CFSAN001992_01460 NC_020307.1 270878 271066 R COG0582 Integrase; hypothetical protein complement(270878..271066) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470056.1 CDS CFSAN001992_01465 NC_020307.1 271410 272207 R COG3228 Uncharacterized protein conserved in bacteria; DgsA anti-repressor MtfA complement(271410..272207) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470057.1 CDS CFSAN001992_01470 NC_020307.1 272964 273383 D COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); DNA polymerase V subunit UmuD 272964..273383 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470058.1 CDS umuC NC_020307.1 273386 274654 D COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA polymerase V subunit UmuC 273386..274654 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470059.1 CDS CFSAN001992_01480 NC_020307.1 275109 275321 D COG1278 Cold shock proteins; cold shock protein 275109..275321 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470060.1 CDS CFSAN001992_01485 NC_020307.1 275780 276958 R COG3203 Outer membrane protein (porin); outer membrane protein S1 complement(275780..276958) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470061.1 CDS CFSAN001992_01490 NC_020307.1 277608 277919 D hypothetical protein 277608..277919 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470062.1 CDS CFSAN001992_01495 NC_020307.1 277999 278694 D COG1418 Predicted HD superfamily hydrolase; hydrolase 277999..278694 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470063.1 CDS CFSAN001992_01500 NC_020307.1 278768 280198 D COG0270 Site-specific DNA methylase; DNA cytosine methylase 278768..280198 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470064.1 CDS CFSAN001992_01505 NC_020307.1 280179 280649 D COG3727 DNA G:T-mismatch repair endonuclease; very short patch repair endonuclease 280179..280649 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470065.1 CDS CFSAN001992_01510 NC_020307.1 280638 281558 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; DMT superfamily transporter inner membrane protein complement(280638..281558) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470066.1 CDS CFSAN001992_01515 NC_020307.1 281734 282645 D COG2354 Uncharacterized protein conserved in bacteria; hypothetical protein 281734..282645 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470067.1 CDS CFSAN001992_01520 NC_020307.1 282722 282907 D COG5475 Uncharacterized small protein; hypothetical protein 282722..282907 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470068.1 CDS CFSAN001992_01525 NC_020307.1 283072 284784 D COG2199 FOG: GGDEF domain; diguanylate cyclase YedQ 283072..284784 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470069.1 CDS CFSAN001992_01530 NC_020307.1 284763 285578 R COG3769 Predicted hydrolase (HAD superfamily); mannosyl-3-phosphoglycerate phosphatase complement(284763..285578) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470070.1 CDS CFSAN001992_01535 NC_020307.1 285888 286115 R hypothetical protein complement(285888..286115) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470071.1 CDS CFSAN001992_01540 NC_020307.1 286244 286438 D hypothetical protein 286244..286438 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470072.1 CDS rcsA NC_020307.1 286477 287100 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; colanic acid capsular biosynthesis activation protein A complement(286477..287100) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470073.1 CDS fliR NC_020307.1 287382 288176 R COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthesis protein FliR complement(287382..288176) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470074.1 CDS fliQ NC_020307.1 288185 288454 R COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthesis protein FliQ complement(288185..288454) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470075.1 CDS fliP NC_020307.1 288464 289201 R COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP complement(288464..289201) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470076.1 CDS CFSAN001992_01565 NC_020307.1 289201 289575 R COG3190 Flagellar biogenesis protein; flagellar biosynthesis protein FliO complement(289201..289575) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470077.1 CDS fliN NC_020307.1 289578 289991 R COG1886 Flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein FliN complement(289578..289991) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470078.1 CDS fliM NC_020307.1 289988 290992 R COG1868 Flagellar motor switch protein; flagellar motor switch protein FliM complement(289988..290992) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470079.1 CDS fliL NC_020307.1 290997 291464 R COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL complement(290997..291464) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470080.1 CDS CFSAN001992_01585 NC_020307.1 291569 292792 R COG3144 Flagellar hook-length control protein; flagellar hook-length control protein complement(291569..292792) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470081.1 CDS fliJ NC_020307.1 292789 293232 R COG2882 Flagellar biosynthesis chaperone; flagellar biosynthesis chaperone complement(292789..293232) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470082.1 CDS fliI NC_020307.1 293254 294624 R COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; flagellum-specific ATP synthase complement(293254..294624) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470083.1 CDS fliH NC_020307.1 294624 295331 R COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H complement(294624..295331) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470084.1 CDS fliG NC_020307.1 295324 296319 R COG1536 Flagellar motor switch protein; flagellar motor switch protein G complement(295324..296319) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470085.1 CDS fliF NC_020307.1 296312 297994 R COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein complement(296312..297994) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470086.1 CDS fliE NC_020307.1 298211 298525 D COG1677 Flagellar hook-basal body protein; flagellar hook-basal body protein FliE 298211..298525 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470087.1 CDS CFSAN001992_01620 NC_020307.1 298646 298999 R hypothetical protein complement(298646..298999) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470088.1 CDS CFSAN001992_01625 NC_020307.1 299297 299530 R COG0425 Predicted redox protein, regulator of disulfide bond formation; hypothetical protein complement(299297..299530) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470089.1 CDS CFSAN001992_01630 NC_020307.1 299527 300732 R COG2391 Predicted transporter component; hypothetical protein complement(299527..300732) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470090.1 CDS CFSAN001992_01635 NC_020307.1 300918 301331 D lipoprotein 300918..301331 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470091.1 CDS CFSAN001992_01640 NC_020307.1 301371 302855 R COG0366 Glycosidases; cytoplasmic alpha-amylase complement(301371..302855) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470092.1 CDS CFSAN001992_01645 NC_020307.1 302927 303295 R flagellar biosynthesis protein FliT complement(302927..303295) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470093.1 CDS fliS NC_020307.1 303295 303702 R COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS complement(303295..303702) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470094.1 CDS fliD NC_020307.1 303717 305120 R COG1345 Flagellar capping protein; flagellar capping protein complement(303717..305120) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470095.1 CDS CFSAN001992_01660 NC_020307.1 305377 306882 D COG1344 Flagellin and related hook-associated proteins; flagellin 305377..306882 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470096.1 CDS CFSAN001992_01665 NC_020307.1 306961 308166 D lysine-N-methylase 306961..308166 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470097.1 CDS fliA NC_020307.1 308363 309082 D COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor 308363..309082 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470098.1 CDS CFSAN001992_01675 NC_020307.1 309141 309692 D flagella biosynthesis protein FliZ 309141..309692 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470099.1 CDS CFSAN001992_01680 NC_020307.1 309839 310639 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; cystine transporter subunit 309839..310639 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470100.1 CDS CFSAN001992_01685 NC_020307.1 310793 311779 D COG2515 1-aminocyclopropane-1-carboxylate deaminase; D-cysteine desulfhydrase 310793..311779 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470101.1 CDS CFSAN001992_01690 NC_020307.1 311800 312468 D COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease 311800..312468 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470102.1 CDS CFSAN001992_01695 NC_020307.1 312465 313217 D COG1126 ABC-type polar amino acid transport system, ATPase component; amino-acid ABC transporter ATP-binding protein YecC 312465..313217 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470103.1 CDS CFSAN001992_01700 NC_020307.1 313450 314172 D COG2771 DNA-binding HTH domain-containing proteins; DNA-binding transcriptional activator SdiA 313450..314172 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470104.1 CDS CFSAN001992_01705 NC_020307.1 314239 314463 R hypothetical protein complement(314239..314463) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470105.1 CDS CFSAN001992_01710 NC_020307.1 314460 314615 R hypothetical protein complement(314460..314615) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470106.1 CDS CFSAN001992_01715 NC_020307.1 314927 315583 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; response regulator 314927..315583 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470107.1 CDS uvrC NC_020307.1 315580 317412 D COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C 315580..317412 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470108.1 CDS CFSAN001992_01725 NC_020307.1 317469 318017 D COG0558 Phosphatidylglycerophosphate synthase; phosphatidylglycerophosphate synthetase 317469..318017 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470109.1 CDS CFSAN001992_01730 NC_020307.1 318766 319050 D hypothetical protein 318766..319050 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470110.1 CDS CFSAN001992_01735 NC_020307.1 319215 320705 D COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein 319215..320705 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470111.1 CDS CFSAN001992_01740 NC_020307.1 320918 321244 D hypothetical protein 320918..321244 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470112.1 CDS CFSAN001992_01745 NC_020307.1 321483 322148 D COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA; hypothetical protein 321483..322148 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470113.1 CDS CFSAN001992_01750 NC_020307.1 322223 323434 R COG0814 Amino acid permeases; tyrosine transporter TyrP complement(322223..323434) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470114.1 CDS CFSAN001992_01755 NC_020307.1 323661 323900 D hypothetical protein 323661..323900 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470115.1 CDS CFSAN001992_01760 NC_020307.1 323946 324443 R COG1528 Ferritin-like protein; ferritin complement(323946..324443) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470116.1 CDS CFSAN001992_01765 NC_020307.1 324683 325018 R hypothetical protein complement(324683..325018) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470117.1 CDS CFSAN001992_01770 NC_020307.1 325274 325912 D COG0698 Ribose 5-phosphate isomerase RpiB; hypothetical protein 325274..325912 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470118.1 CDS CFSAN001992_01775 NC_020307.1 326091 326594 R COG1528 Ferritin-like protein; ferritin-like protein complement(326091..326594) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470119.1 CDS CFSAN001992_01780 NC_020307.1 326802 326897 D hypothetical protein 326802..326897 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470120.1 CDS CFSAN001992_01785 NC_020307.1 327152 327709 D COG0693 Putative intracellular protease/amidase; ThiJ/PfpI domain-containing protein 327152..327709 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470121.1 CDS CFSAN001992_01790 NC_020307.1 328342 329145 D COG1877 Trehalose-6-phosphatase; trehalose-6-phosphate phosphatase 328342..329145 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470122.1 CDS CFSAN001992_01795 NC_020307.1 329120 330541 D COG0380 Trehalose-6-phosphate synthase; trehalose-6-phosphate synthase 329120..330541 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470123.1 CDS CFSAN001992_01800 NC_020307.1 330559 330987 R COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UspC complement(330559..330987) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470124.1 CDS CFSAN001992_01805 NC_020307.1 331783 332124 D transcriptional activator FlhD 331783..332124 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470125.1 CDS CFSAN001992_01810 NC_020307.1 332127 332705 D transcriptional activator FlhC 332127..332705 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470126.1 CDS CFSAN001992_01815 NC_020307.1 332830 333717 D COG1291 Flagellar motor component; flagellar motor protein MotA 332830..333717 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470127.1 CDS motB NC_020307.1 333714 334643 D COG1360 Flagellar motor protein; flagellar motor protein MotB 333714..334643 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470128.1 CDS CFSAN001992_01825 NC_020307.1 334648 336663 D COG0643 Chemotaxis protein histidine kinase and related kinases; chemotaxis protein CheA 334648..336663 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470129.1 CDS CFSAN001992_01830 NC_020307.1 336684 337187 D COG0835 Chemotaxis signal transduction protein; purine-binding chemotaxis protein 336684..337187 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470130.1 CDS CFSAN001992_01835 NC_020307.1 337424 339085 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein II 337424..339085 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470131.1 CDS CFSAN001992_01840 NC_020307.1 339246 340112 D COG1352 Methylase of chemotaxis methyl-accepting proteins; chemotaxis methyltransferase CheR 339246..340112 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470132.1 CDS CFSAN001992_01845 NC_020307.1 340109 341158 D COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain; chemotaxis-specific protein-glutamate methyltransferase 340109..341158 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470133.1 CDS CFSAN001992_01850 NC_020307.1 341176 341565 D COG0784 FOG: CheY-like receiver; chemotaxis regulatory protein CheY 341176..341565 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470134.1 CDS CFSAN001992_01855 NC_020307.1 341576 342220 D COG3143 Chemotaxis protein; chemotaxis regulator CheZ 341576..342220 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470135.1 CDS flhB NC_020307.1 342414 343565 D COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 342414..343565 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470136.1 CDS flhA NC_020307.1 343558 345636 D COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar biosynthesis protein FlhA 343558..345636 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470137.1 CDS CFSAN001992_01870 NC_020307.1 345636 346028 D flagellar protein FlhE 345636..346028 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470138.1 CDS CFSAN001992_01875 NC_020307.1 346265 347404 D COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins; putative glycosyl hydrolase yteR 346265..347404 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470139.1 CDS CFSAN001992_01880 NC_020307.1 347458 349329 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 complement(347458..349329) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470140.1 CDS argS NC_020307.1 349518 351251 R COG0018 Arginyl-tRNA synthetase; arginyl-tRNA ligase complement(349518..351251) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470141.1 CDS CFSAN001992_01890 NC_020307.1 351488 352057 D COG3102 Uncharacterized protein conserved in bacteria; hypothetical protein 351488..352057 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470142.1 CDS CFSAN001992_01895 NC_020307.1 352077 352823 D COG3142 Uncharacterized protein involved in copper resistance; copper homeostasis protein CutC 352077..352823 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470143.1 CDS CFSAN001992_01900 NC_020307.1 353059 354030 R COG0500 SAM-dependent methyltransferases; tRNA mo(5)U34 methyltransferase complement(353059..354030) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470144.1 CDS CFSAN001992_01905 NC_020307.1 354027 354770 R COG0500 SAM-dependent methyltransferases; tRNA (cmo5U34)-methyltransferase complement(354027..354770) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470145.1 CDS CFSAN001992_01910 NC_020307.1 354811 355206 R COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily; Inner membrane protein yecN complement(354811..355206) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470146.1 CDS CFSAN001992_01915 NC_020307.1 355259 356077 R COG1801 Uncharacterized conserved protein; hypothetical protein complement(355259..356077) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470147.1 CDS CFSAN001992_01920 NC_020307.1 356074 356640 R COG1335 Amidases related to nicotinamidase; hydrolase complement(356074..356640) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470148.1 CDS aspS NC_020307.1 356965 358737 D COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA ligase 356965..358737 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470149.1 CDS nudB NC_020307.1 358840 359292 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; dihydroneopterin triphosphate pyrophosphatase 358840..359292 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470150.1 CDS CFSAN001992_01935 NC_020307.1 359322 360062 D COG0217 Uncharacterized conserved protein; hypothetical protein 359322..360062 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470151.1 CDS ruvC NC_020307.1 360099 360620 D COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase 360099..360620 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470152.1 CDS CFSAN001992_01945 NC_020307.1 360622 361221 R hypothetical protein complement(360622..361221) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470153.1 CDS ruvA NC_020307.1 362638 363249 D COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA 362638..363249 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470154.1 CDS ruvB NC_020307.1 363258 364268 D COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB 363258..364268 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470155.1 CDS znuB NC_020307.1 364347 365132 R COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; high-affinity zinc transporter membrane component complement(364347..365132) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470156.1 CDS znuC NC_020307.1 365129 365884 R COG1121 ABC-type Mn/Zn transport systems, ATPase component; high-affinity zinc transporter ATPase complement(365129..365884) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470157.1 CDS znuA NC_020307.1 365963 366907 D COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin; high-affinity zinc transporter periplasmic component 365963..366907 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470158.1 CDS CFSAN001992_01975 NC_020307.1 366923 368242 D COG0739 Membrane proteins related to metalloendopeptidases; peptidase 366923..368242 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470159.1 CDS CFSAN001992_01980 NC_020307.1 368133 368360 R COG0127 Xanthosine triphosphate pyrophosphatase; hypothetical protein complement(368133..368360) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470160.1 CDS CFSAN001992_01985 NC_020307.1 368359 369330 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 368359..369330 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470161.1 CDS CFSAN001992_01990 NC_020307.1 369403 370845 R COG0469 Pyruvate kinase; pyruvate kinase complement(369403..370845) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470162.1 CDS CFSAN001992_01995 NC_020307.1 370969 371838 R COG1737 Transcriptional regulators; DNA-binding transcriptional regulator HexR complement(370969..371838) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470163.1 CDS CFSAN001992_02000 NC_020307.1 372180 373655 D COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 372180..373655 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470164.1 CDS CFSAN001992_02005 NC_020307.1 373890 375701 D COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; phosphogluconate dehydratase 373890..375701 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470165.1 CDS CFSAN001992_02010 NC_020307.1 375739 376380 D COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 375739..376380 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470166.1 CDS CFSAN001992_02015 NC_020307.1 376385 376480 R hypothetical protein complement(376385..376480) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470167.1 CDS purT NC_020307.1 376480 377658 R COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase); phosphoribosylglycinamide formyltransferase 2 complement(376480..377658) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470168.1 CDS CFSAN001992_02025 NC_020307.1 377789 378079 D COG3141 Uncharacterized protein conserved in bacteria; DNA damage-inducible protein YebG 377789..378079 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470169.1 CDS CFSAN001992_02030 NC_020307.1 378147 378500 D hypothetical protein 378147..378500 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470170.1 CDS CFSAN001992_02035 NC_020307.1 378594 379253 D COG2979 Uncharacterized protein conserved in bacteria; Inner membrane protein yebE 378594..379253 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470171.1 CDS CFSAN001992_02040 NC_020307.1 379466 381517 D COG1770 Protease II; protease 2 379466..381517 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470172.1 CDS CFSAN001992_02045 NC_020307.1 381554 382252 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; exodeoxyribonuclease X complement(381554..382252) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470173.1 CDS CFSAN001992_02050 NC_020307.1 382276 382932 R COG0388 Predicted amidohydrolase; carbon-nitrogen family hydrolase complement(382276..382932) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470174.1 CDS CFSAN001992_02055 NC_020307.1 383039 383269 R DNA polymerase III subunit theta complement(383039..383269) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470175.1 CDS CFSAN001992_02060 NC_020307.1 383407 383781 D COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC; hypothetical protein 383407..383781 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470176.1 CDS CFSAN001992_02065 NC_020307.1 383785 384657 D COG1276 Putative copper export protein; cation transporter 383785..384657 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470177.1 CDS CFSAN001992_02070 NC_020307.1 384674 385027 D hypothetical protein 384674..385027 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470178.1 CDS CFSAN001992_02075 NC_020307.1 385401 386480 R COG0582 Integrase; phage integrase complement(385401..386480) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470179.1 CDS CFSAN001992_02080 NC_020307.1 386477 387583 R exodeoxyribonuclease 8 complement(386477..387583) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470180.1 CDS CFSAN001992_02085 NC_020307.1 387614 387901 D COG3179 Predicted chitinase; lytic enzyme 387614..387901 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470181.1 CDS CFSAN001992_02090 NC_020307.1 387898 388431 D exported phage protein 387898..388431 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470182.1 CDS CFSAN001992_02095 NC_020307.1 388688 388855 R hypothetical protein complement(388688..388855) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470183.1 CDS CFSAN001992_02100 NC_020307.1 389158 389649 D hypothetical protein 389158..389649 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470184.1 CDS CFSAN001992_02105 NC_020307.1 389636 389815 D hypothetical protein 389636..389815 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470185.1 CDS CFSAN001992_02110 NC_020307.1 389835 390209 D COG5525 Bacteriophage tail assembly protein; phage terminase large subunit 389835..390209 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470186.1 CDS CFSAN001992_02115 NC_020307.1 390202 391539 D Tail Fiber Protein 390202..391539 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470187.1 CDS CFSAN001992_02120 NC_020307.1 391821 392405 D phage tail assembly-like protein 391821..392405 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470188.1 CDS CFSAN001992_02125 NC_020307.1 392893 393009 R tail fiber assembly protein complement(392893..393009) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470189.1 CDS CFSAN001992_02130 NC_020307.1 393215 393373 R hypothetical protein complement(393215..393373) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470190.1 CDS CFSAN001992_02135 NC_020307.1 393323 393397 D arsenical pump membrane protein 393323..393397 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470191.1 CDS CFSAN001992_02140 NC_020307.1 393920 394096 D hypothetical protein 393920..394096 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470192.1 CDS CFSAN001992_02145 NC_020307.1 394545 395159 R COG1495 Disulfide bond formation protein DsbB; hypothetical protein complement(394545..395159) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470193.1 CDS CFSAN001992_02150 NC_020307.1 395169 395327 R hypothetical protein complement(395169..395327) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470194.1 CDS CFSAN001992_02155 NC_020307.1 395459 396373 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(395459..396373) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470195.1 CDS CFSAN001992_02160 NC_020307.1 397436 397552 R hypothetical protein complement(397436..397552) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470196.1 CDS CFSAN001992_02165 NC_020307.1 397704 398120 D COG3328 Transposase and inactivated derivatives; transposase, Mutator family protein 397704..398120 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470197.1 CDS CFSAN001992_02170 NC_020307.1 398083 398421 D COG3328 Transposase and inactivated derivatives; putative transposase for insertion sequence element ISRM3-like protein 398083..398421 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470198.1 CDS CFSAN001992_02175 NC_020307.1 398820 398966 R hypothetical protein complement(398820..398966) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470199.1 CDS CFSAN001992_02180 NC_020307.1 399511 399930 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative N-acetyltransferase 399511..399930 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470200.1 CDS CFSAN001992_02185 NC_020307.1 400318 400794 R hypothetical protein complement(400318..400794) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470201.1 CDS CFSAN001992_02190 NC_020307.1 401123 401518 R COG5562 Phage envelope protein; hypothetical protein complement(401123..401518) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470202.1 CDS CFSAN001992_02195 NC_020307.1 402202 402924 D type III secretion protein SopE2 402202..402924 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470203.1 CDS CFSAN001992_02200 NC_020307.1 403209 403373 D hypothetical protein 403209..403373 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470204.1 CDS pphA NC_020307.1 403597 404247 D COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; serine/threonine protein phosphatase 1 403597..404247 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470205.1 CDS CFSAN001992_02210 NC_020307.1 404266 404457 R hypothetical protein complement(404266..404457) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470206.1 CDS CFSAN001992_02215 NC_020307.1 404568 404807 R hypothetical protein complement(404568..404807) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470207.1 CDS yebU NC_020307.1 404922 406361 R COG0144 tRNA and rRNA cytosine-C5-methylases; rRNA (cytosine-C(5)-)-methyltransferase RsmF complement(404922..406361) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470208.1 CDS CFSAN001992_02225 NC_020307.1 406439 409072 R COG3008 Paraquat-inducible protein B; mce-like protein complement(406439..409072) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470209.1 CDS CFSAN001992_02230 NC_020307.1 409041 410324 R COG2995 Uncharacterized paraquat-inducible protein A; integral membrane protein, PqiA family complement(409041..410324) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470210.1 CDS CFSAN001992_02235 NC_020307.1 410453 410950 D COG1956 GAF domain-containing protein; putative nucleotide-binding protein 410453..410950 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470211.1 CDS CFSAN001992_02240 NC_020307.1 411048 411734 D COG3109 Activator of osmoprotectant transporter ProP; ProP expression regulator 411048..411734 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470212.1 CDS CFSAN001992_02245 NC_020307.1 411754 413802 D COG0793 Periplasmic protease; carboxy-terminal protease 411754..413802 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470213.1 CDS CFSAN001992_02250 NC_020307.1 413995 414876 D COG0501 Zn-dependent protease with chaperone function; heat shock protein HtpX 413995..414876 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470214.1 CDS CFSAN001992_02255 NC_020307.1 414924 416297 R COG0477 Permeases of the major facilitator superfamily; transport protein complement(414924..416297) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470215.1 CDS CFSAN001992_02260 NC_020307.1 416473 417264 D COG1414 Transcriptional regulator; DNA-binding transcriptional regulator KdgR 416473..417264 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470216.1 CDS CFSAN001992_02265 NC_020307.1 417279 417380 D hypothetical protein 417279..417380 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470217.1 CDS CFSAN001992_02270 NC_020307.1 417476 417715 R hypothetical protein complement(417476..417715) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470218.1 CDS CFSAN001992_02275 NC_020307.1 417873 418016 D PhoPQ regulatory protein 417873..418016 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470219.1 CDS CFSAN001992_02280 NC_020307.1 418087 418374 D hypothetical protein 418087..418374 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470220.1 CDS CFSAN001992_02285 NC_020307.1 419023 419166 D putative cytoplasmic protein 419023..419166 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470221.1 CDS CFSAN001992_02290 NC_020307.1 419179 419388 D COG1278 Cold shock proteins; Cold shock-like protein cspC 419179..419388 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470222.1 CDS CFSAN001992_02295 NC_020307.1 419608 421353 D COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 419608..421353 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470223.1 CDS rrmA NC_020307.1 421419 422228 D COG0500 SAM-dependent methyltransferases; 23S rRNA methyltransferase A 421419..422228 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470224.1 CDS CFSAN001992_02305 NC_020307.1 422225 422791 R COG1971 Predicted membrane protein; hypothetical protein complement(422225..422791) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470225.1 CDS CFSAN001992_02310 NC_020307.1 423201 423659 R COG4811 Predicted membrane protein; hypothetical protein complement(423201..423659) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470226.1 CDS CFSAN001992_02315 NC_020307.1 423718 424578 R COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; PTS system mannose-specific transporter subunit IID complement(423718..424578) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470227.1 CDS CFSAN001992_02320 NC_020307.1 424582 425382 R COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; PTS system mannose-specific transporter subunit IIC complement(424582..425382) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470228.1 CDS CFSAN001992_02325 NC_020307.1 425435 426403 R COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; PTS system mannose-specific transporter subunits IIAB complement(425435..426403) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470229.1 CDS CFSAN001992_02330 NC_020307.1 426876 428435 D COG0861 Membrane protein TerC, possibly involved in tellurium resistance; membrane protein TerC family/CBS/transporter associated domain protein 426876..428435 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470230.1 CDS CFSAN001992_02335 NC_020307.1 428457 430058 R COG2200 FOG: EAL domain; diguanylate cyclase complement(428457..430058) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470231.1 CDS CFSAN001992_02340 NC_020307.1 430196 431560 R COG1760 L-serine deaminase; L-serine deaminase complement(430196..431560) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470232.1 CDS CFSAN001992_02345 NC_020307.1 431824 432402 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase complement(431824..432402) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470233.1 CDS pabB NC_020307.1 432406 433767 R COG0147 Anthranilate/para-aminobenzoate synthases component I; aminodeoxychorismate synthase subunit I complement(432406..433767) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470234.1 CDS CFSAN001992_02355 NC_020307.1 433851 434030 D COG3140 Uncharacterized protein conserved in bacteria; hypothetical protein 433851..434030 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470235.1 CDS CFSAN001992_02360 NC_020307.1 434036 434380 R COG0251 Putative translation initiation inhibitor, yjgF family; UPF0076 protein yabJ complement(434036..434380) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470236.1 CDS CFSAN001992_02365 NC_020307.1 434511 436421 D COG1199 Rad3-related DNA helicases; DinG family ATP-dependent helicase YoaA 434511..436421 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470237.1 CDS CFSAN001992_02370 NC_020307.1 436479 437174 D COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; hypothetical protein 436479..437174 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470238.1 CDS CFSAN001992_02375 NC_020307.1 437246 437827 D COG3065 Starvation-inducible outer membrane lipoprotein; lipoprotein 437246..437827 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470239.1 CDS CFSAN001992_02380 NC_020307.1 438032 439717 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; long-chain-fatty-acid--CoA ligase 438032..439717 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470240.1 CDS CFSAN001992_02385 NC_020307.1 439790 440917 D COG0349 Ribonuclease D; ribonuclease D 439790..440917 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470241.1 CDS minE NC_020307.1 441039 441305 R COG0851 Septum formation topological specificity factor; cell division topological specificity factor MinE complement(441039..441305) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470242.1 CDS CFSAN001992_02395 NC_020307.1 441309 442121 R COG2894 Septum formation inhibitor-activating ATPase; cell division inhibitor MinD complement(441309..442121) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470243.1 CDS minC NC_020307.1 442145 442852 R COG0850 Septum formation inhibitor; septum formation inhibitor complement(442145..442852) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470244.1 CDS CFSAN001992_02405 NC_020307.1 442978 443271 D COG3100 Uncharacterized protein conserved in bacteria; hypothetical protein 442978..443271 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470245.1 CDS CFSAN001992_02410 NC_020307.1 443321 443980 D COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway); hypothetical protein 443321..443980 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470246.1 CDS CFSAN001992_02415 NC_020307.1 444073 444519 D COG2983 Uncharacterized conserved protein; hypothetical protein 444073..444519 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470247.1 CDS CFSAN001992_02420 NC_020307.1 444729 444827 D hypothetical protein 444729..444827 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470248.1 CDS CFSAN001992_02425 NC_020307.1 445201 445374 D Protein gnsA 445201..445374 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470249.1 CDS CFSAN001992_02430 NC_020307.1 445446 445787 R COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance; hypothetical protein complement(445446..445787) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470250.1 CDS CFSAN001992_02435 NC_020307.1 445897 446427 R COG1495 Disulfide bond formation protein DsbB; disulfide bond formation protein B complement(445897..446427) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470251.1 CDS nhaB NC_020307.1 446569 448113 R COG3067 Na+/H+ antiporter; sodium/proton antiporter complement(446569..448113) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470252.1 CDS CFSAN001992_02445 NC_020307.1 448333 449052 D COG2186 Transcriptional regulators; fatty acid metabolism regulator 448333..449052 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470253.1 CDS CFSAN001992_02450 NC_020307.1 449099 450631 R COG2719 Uncharacterized conserved protein; SpoVR family protein complement(449099..450631) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470254.1 CDS CFSAN001992_02455 NC_020307.1 450954 452252 D COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino acid dehydrogenase small subunit 450954..452252 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470255.1 CDS dadX NC_020307.1 452266 453336 D COG0787 Alanine racemase; alanine racemase 452266..453336 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470256.1 CDS CFSAN001992_02465 NC_020307.1 453399 455132 R COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain; potassium/proton antiporter complement(453399..455132) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470257.1 CDS ldcA NC_020307.1 455229 456143 R COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF; L,D-carboxypeptidase A complement(455229..456143) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470258.1 CDS emtA NC_020307.1 456314 456925 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic murein endotransglycosylase E 456314..456925 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470259.1 CDS CFSAN001992_02480 NC_020307.1 456939 457673 R COG5581 Predicted glycosyltransferase; inner membrane protein complement(456939..457673) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470260.1 CDS CFSAN001992_02485 NC_020307.1 457842 458096 D COG2261 Predicted membrane protein; transglycosylase associated protein 457842..458096 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470261.1 CDS treA NC_020307.1 458159 459871 R COG1626 Neutral trehalase; trehalase complement(458159..459871) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470262.1 CDS CFSAN001992_02495 NC_020307.1 460085 461359 R COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase complement(460085..461359) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470263.1 CDS CFSAN001992_02500 NC_020307.1 461754 461843 R hypothetical protein complement(461754..461843) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470264.1 CDS CFSAN001992_02505 NC_020307.1 461856 462992 R COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome bd-II oxidase subunit 2 complement(461856..462992) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470265.1 CDS CFSAN001992_02510 NC_020307.1 463004 464548 R COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cytochrome bd-II oxidase subunit 1 complement(463004..464548) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470266.1 CDS CFSAN001992_02515 NC_020307.1 464623 465471 R hydrogenase-1 operon protein HyaF complement(464623..465471) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470267.1 CDS CFSAN001992_02520 NC_020307.1 465468 465872 R COG0526 Thiol-disulfide isomerase and thioredoxins; hydrogenase-1 operon protein HyaE complement(465468..465872) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470268.1 CDS CFSAN001992_02525 NC_020307.1 465862 466458 R COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase 1 maturation protease complement(465862..466458) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470269.1 CDS CFSAN001992_02530 NC_020307.1 466455 467186 R COG1969 Ni,Fe-hydrogenase I cytochrome b subunit; hydrogenase 1 b-type cytochrome subunit complement(466455..467186) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470270.1 CDS CFSAN001992_02535 NC_020307.1 467205 468998 R COG0374 Ni,Fe-hydrogenase I large subunit; hydrogenase 1 large subunit complement(467205..468998) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470271.1 CDS CFSAN001992_02540 NC_020307.1 468995 470113 R COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase 1, small subunit complement(468995..470113) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470272.1 CDS CFSAN001992_02545 NC_020307.1 470606 471871 D cytoplasmic protein 470606..471871 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470273.1 CDS CFSAN001992_02550 NC_020307.1 472030 473121 R COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF complement(472030..473121) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470274.1 CDS CFSAN001992_02555 NC_020307.1 473238 473822 R COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(473238..473822) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470275.1 CDS CFSAN001992_02560 NC_020307.1 474097 474375 D hypothetical protein 474097..474375 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470276.1 CDS CFSAN001992_02565 NC_020307.1 474420 476105 R COG0659 Sulfate permease and related transporters (MFS superfamily); transporter complement(474420..476105) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470277.1 CDS CFSAN001992_02570 NC_020307.1 476230 477177 R COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase complement(476230..477177) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470278.1 CDS ipk NC_020307.1 477443 478294 R COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(477443..478294) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470279.1 CDS lolB NC_020307.1 478291 478914 R COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis; outer membrane lipoprotein LolB complement(478291..478914) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470280.1 CDS CFSAN001992_02585 NC_020307.1 478932 479060 D hypothetical protein 478932..479060 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470281.1 CDS hemA NC_020307.1 479228 480484 D COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase 479228..480484 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470282.1 CDS prfA NC_020307.1 480525 481607 D COG0216 Protein chain release factor A; peptide chain release factor 1 480525..481607 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470283.1 CDS CFSAN001992_02600 NC_020307.1 481607 482440 D COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 481607..482440 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470284.1 CDS CFSAN001992_02605 NC_020307.1 482437 482826 D COG3094 Uncharacterized protein conserved in bacteria; hypothetical protein 482437..482826 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470285.1 CDS CFSAN001992_02610 NC_020307.1 482830 483639 D COG2912 Uncharacterized conserved protein; hypothetical protein 482830..483639 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470286.1 CDS CFSAN001992_02615 NC_020307.1 483677 484531 D COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase 483677..484531 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470287.1 CDS CFSAN001992_02620 NC_020307.1 484585 485685 R COG0387 Ca2+/H+ antiporter; calcium/sodium:proton antiporter complement(484585..485685) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470288.1 CDS chaB NC_020307.1 485952 486182 D COG4572 Putative cation transport regulator; cation transport regulator 485952..486182 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470289.1 CDS CFSAN001992_02630 NC_020307.1 486262 486615 R COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction; Sulfurtransferase tusD tRNA 2-thiouridine synthesizing protein D complement(486262..486615) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470290.1 CDS CFSAN001992_02635 NC_020307.1 486834 488216 D invasin 486834..488216 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470291.1 CDS CFSAN001992_02640 NC_020307.1 488217 488867 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional regulator NarL complement(488217..488867) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470292.1 CDS CFSAN001992_02645 NC_020307.1 488860 490656 R COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; nitrate/nitrite sensor protein NarX complement(488860..490656) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470293.1 CDS CFSAN001992_02650 NC_020307.1 490997 492394 D COG2223 Nitrate/nitrite transporter; nitrate/nitrite transporter NarK 490997..492394 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470294.1 CDS narG NC_020307.1 492782 496525 D COG5013 Nitrate reductase alpha subunit; nitrate reductase A subunit alpha 492782..496525 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470295.1 CDS narH NC_020307.1 496522 498057 D COG1140 Nitrate reductase beta subunit; nitrate reductase A subunit beta 496522..498057 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470296.1 CDS CFSAN001992_02665 NC_020307.1 498054 498764 D COG2180 Nitrate reductase delta subunit; nitrate reductase molybdenum cofactor assembly chaperone NarJ 498054..498764 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470297.1 CDS narI NC_020307.1 498764 499441 D COG2181 Nitrate reductase gamma subunit; nitrate reductase A subunit gamma 498764..499441 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470298.1 CDS purU NC_020307.1 500371 501213 R COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase complement(500371..501213) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470299.1 CDS CFSAN001992_02685 NC_020307.1 501264 501722 R COG3012 Uncharacterized protein conserved in bacteria; hypothetical protein complement(501264..501722) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470300.1 CDS CFSAN001992_02690 NC_020307.1 501833 502738 D COG1752 Predicted esterase of the alpha-beta hydrolase superfamily; hypothetical protein 501833..502738 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470301.1 CDS CFSAN001992_02695 NC_020307.1 502829 503842 D COG0784 FOG: CheY-like receiver; response regulator of RpoS 502829..503842 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470302.1 CDS CFSAN001992_02700 NC_020307.1 504045 504953 D COG1210 UDP-glucose pyrophosphorylase; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 504045..504953 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470303.1 CDS CFSAN001992_02705 NC_020307.1 505085 505498 R COG2916 DNA-binding protein H-NS; global DNA-binding transcriptional dual regulator H-NS protein complement(505085..505498) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470304.1 CDS CFSAN001992_02710 NC_020307.1 506161 506778 D COG1435 Thymidine kinase; thymidine kinase 506161..506778 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470305.1 CDS CFSAN001992_02715 NC_020307.1 506975 509653 R COG1012 NAD-dependent aldehyde dehydrogenases; bifunctional acetaldehyde-CoA/alcohol dehydrogenase complement(506975..509653) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470306.1 CDS CFSAN001992_02720 NC_020307.1 510130 510777 D COG2095 Multiple antibiotic transporter; hypothetical protein 510130..510777 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470307.1 CDS CFSAN001992_02725 NC_020307.1 511542 513173 D COG4166 ABC-type oligopeptide transport system, periplasmic component; oligopeptide ABC transporter substrate-binding protein OppA 511542..513173 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470308.1 CDS oppB NC_020307.1 513296 514216 D COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; oligopeptide transporter permease 513296..514216 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470309.1 CDS CFSAN001992_02735 NC_020307.1 514231 515139 D COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; oligopeptide ABC transporter permease OppC 514231..515139 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470310.1 CDS oppD NC_020307.1 515151 516158 D COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; oligopeptide transporter ATP-binding component 515151..516158 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470311.1 CDS CFSAN001992_02745 NC_020307.1 516155 517159 D COG4608 ABC-type oligopeptide transport system, ATPase component; oligopeptide ABC transporter ATP-binding protein OppF 516155..517159 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470312.1 CDS CFSAN001992_02750 NC_020307.1 517207 518043 D COG1226 Kef-type K+ transport systems, predicted NAD-binding component; Ion transport protein 517207..518043 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470313.1 CDS CFSAN001992_02755 NC_020307.1 518091 518420 R COG3099 Uncharacterized protein conserved in bacteria; dsDNA-mimic protein complement(518091..518420) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470314.1 CDS cls NC_020307.1 518454 519914 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; cardiolipin synthetase complement(518454..519914) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470315.1 CDS CFSAN001992_02765 NC_020307.1 520057 520230 D hypothetical protein 520057..520230 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470316.1 CDS CFSAN001992_02770 NC_020307.1 520274 520570 R COG2350 Uncharacterized protein conserved in bacteria; hypothetical protein complement(520274..520570) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470317.1 CDS CFSAN001992_02775 NC_020307.1 520794 521516 D COG0810 Periplasmic protein TonB, links inner and outer membranes; transport protein TonB 520794..521516 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470318.1 CDS CFSAN001992_02780 NC_020307.1 521576 521977 R COG1607 Acyl-CoA hydrolase; acyl-CoA esterase complement(521576..521977) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470319.1 CDS CFSAN001992_02785 NC_020307.1 522138 522677 R COG2917 Intracellular septation protein A; intracellular septation protein A complement(522138..522677) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470320.1 CDS CFSAN001992_02790 NC_020307.1 522734 523477 R hypothetical protein complement(522734..523477) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470321.1 CDS CFSAN001992_02795 NC_020307.1 523503 523907 R COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein complement(523503..523907) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470322.1 CDS CFSAN001992_02800 NC_020307.1 524244 524882 D COG3047 Outer membrane protein W; outer membrane protein W 524244..524882 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470323.1 CDS CFSAN001992_02805 NC_020307.1 524964 525842 R COG3546 Mn-containing catalase; Mn-containing catalase complement(524964..525842) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470324.1 CDS CFSAN001992_02810 NC_020307.1 525862 526368 R COG3685 Uncharacterized protein conserved in bacteria; Protein yciE complement(525862..526368) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470325.1 CDS CFSAN001992_02815 NC_020307.1 526442 526945 R COG3685 Uncharacterized protein conserved in bacteria; Ferritin-like protein complement(526442..526945) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470326.1 CDS CFSAN001992_02820 NC_020307.1 527035 527217 R COG3729 General stress protein; hypothetical protein complement(527035..527217) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470327.1 CDS trpA NC_020307.1 527697 528503 R COG0159 Tryptophan synthase alpha chain; tryptophan synthase subunit alpha complement(527697..528503) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470328.1 CDS CFSAN001992_02830 NC_020307.1 528503 529696 R COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta complement(528503..529696) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470329.1 CDS CFSAN001992_02835 NC_020307.1 529706 531064 R COG0134 Indole-3-glycerol phosphate synthase; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(529706..531064) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470335.1 CDS CFSAN001992_02865 NC_020307.1 532674 534236 R COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I complement(532674..534236) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470336.1 CDS CFSAN001992_02870 NC_020307.1 534497 535378 D COG0613 Predicted metal-dependent phosphoesterases (PHP family); Protein trpH 534497..535378 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470337.1 CDS CFSAN001992_02875 NC_020307.1 535386 536006 D COG0009 Putative translation factor (SUA5); hypothetical protein 535386..536006 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470338.1 CDS CFSAN001992_02880 NC_020307.1 536107 536982 D COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 23S rRNA pseudouridylate synthase B 536107..536982 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470339.1 CDS CFSAN001992_02885 NC_020307.1 537069 537659 R COG2109 ATP:corrinoid adenosyltransferase; cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase complement(537069..537659) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470340.1 CDS CFSAN001992_02890 NC_020307.1 537656 538417 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxoacyl-(acyl carrier protein) reductase complement(537656..538417) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470341.1 CDS CFSAN001992_02895 NC_020307.1 538655 539701 D COG0616 Periplasmic serine proteases (ClpP class); inner membrane peptidase 538655..539701 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470342.1 CDS CFSAN001992_02900 NC_020307.1 539743 539994 R hypothetical protein complement(539743..539994) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470345.1 CDS cysB NC_020307.1 543409 544383 D COG0583 Transcriptional regulator; transcriptional regulator CysB 543409..544383 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470346.1 CDS CFSAN001992_02920 NC_020307.1 544676 544804 D hypothetical protein 544676..544804 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470347.1 CDS CFSAN001992_02925 NC_020307.1 545360 548035 D COG1048 Aconitase A; aconitate hydratase 545360..548035 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470348.1 CDS ribA NC_020307.1 548091 548681 R COG0807 GTP cyclohydrolase II; GTP cyclohydrolase II complement(548091..548681) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470349.1 CDS CFSAN001992_02935 NC_020307.1 548877 549641 D COG0671 Membrane-associated phospholipid phosphatase; phosphatidylglycerophosphatase B 548877..549641 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470350.1 CDS CFSAN001992_02940 NC_020307.1 549791 550099 D COG3771 Predicted membrane protein; inner membrane protein 549791..550099 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470351.1 CDS CFSAN001992_02945 NC_020307.1 550106 550825 D COG2956 Predicted N-acetylglucosaminyl transferase; tetratricopeptide repeat protein 550106..550825 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470352.1 CDS CFSAN001992_02950 NC_020307.1 551044 551271 D COG2956 Predicted N-acetylglucosaminyl transferase; tetratricopeptide repeat protein 551044..551271 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470353.1 CDS CFSAN001992_02955 NC_020307.1 551462 552199 D COG0284 Orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 551462..552199 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470354.1 CDS CFSAN001992_02960 NC_020307.1 552199 552525 D COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins; translation initiation factor Sui1 552199..552525 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470355.1 CDS CFSAN001992_02965 NC_020307.1 552645 552863 R lipoprotein complement(552645..552863) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470356.1 CDS CFSAN001992_02970 NC_020307.1 553122 553874 R COG1349 Transcriptional regulators of sugar metabolism; DeoR family transcriptional regulator complement(553122..553874) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470357.1 CDS CFSAN001992_02975 NC_020307.1 553961 554140 R hypothetical protein complement(553961..554140) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470358.1 CDS CFSAN001992_02980 NC_020307.1 554262 556244 R COG2199 FOG: GGDEF domain; RNase II stability modulator complement(554262..556244) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470359.1 CDS CFSAN001992_02985 NC_020307.1 556506 558440 R COG4776 Exoribonuclease II; exoribonuclease II complement(556506..558440) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470360.1 CDS CFSAN001992_02990 NC_020307.1 558529 559605 R COG4950 Uncharacterized protein conserved in bacteria; hypothetical protein complement(558529..559605) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470361.1 CDS CFSAN001992_02995 NC_020307.1 559862 560650 R COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-(acyl carrier protein) reductase complement(559862..560650) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470362.1 CDS CFSAN001992_03000 NC_020307.1 561652 562629 D Secreted effector kinase steC 561652..562629 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470363.1 CDS CFSAN001992_03005 NC_020307.1 563096 563803 D COG2200 FOG: EAL domain; hypothetical protein 563096..563803 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470364.1 CDS CFSAN001992_03010 NC_020307.1 563819 564625 R COG4167 ABC-type antimicrobial peptide transport system, ATPase component; antimicrobial peptide ABC system ATP-binding protein SapF complement(563819..564625) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470365.1 CDS CFSAN001992_03015 NC_020307.1 564627 565619 R COG4170 ABC-type antimicrobial peptide transport system, ATPase component; antimicrobial peptide ABC transporter ATP-binding protein complement(564627..565619) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470366.1 CDS CFSAN001992_03020 NC_020307.1 565619 566509 R COG4171 ABC-type antimicrobial peptide transport system, permease component; antimicrobial peptide ABC transporter permease SapC complement(565619..566509) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470367.1 CDS CFSAN001992_03025 NC_020307.1 566675 567034 D COG0582 Integrase; integrase 566675..567034 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470368.1 CDS CFSAN001992_03030 NC_020307.1 567414 568136 R hypothetical protein complement(567414..568136) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470369.1 CDS CFSAN001992_03035 NC_020307.1 568607 568789 D hypothetical protein 568607..568789 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470370.1 CDS CFSAN001992_03040 NC_020307.1 569326 569517 D hypothetical protein 569326..569517 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470371.1 CDS CFSAN001992_03045 NC_020307.1 569444 569869 D subtilase cytotoxin subunit B-like protein 569444..569869 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470372.1 CDS CFSAN001992_03050 NC_020307.1 570323 570562 D COG1961 Site-specific recombinases, DNA invertase Pin homologs; hypothetical protein 570323..570562 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470373.1 CDS CFSAN001992_03055 NC_020307.1 570790 571755 R COG4168 ABC-type antimicrobial peptide transport system, permease component; antimicrobial peptide ABC transporter permease SapB complement(570790..571755) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470374.1 CDS CFSAN001992_03060 NC_020307.1 571752 573401 R COG4166 ABC-type oligopeptide transport system, periplasmic component; antimicrobial peptide ABC transporter periplasmic binding protein SapA complement(571752..573401) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470375.1 CDS pspF NC_020307.1 573513 574493 R COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; phage shock protein operon transcriptional activator complement(573513..574493) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470376.1 CDS CFSAN001992_03070 NC_020307.1 574664 575332 D COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription; phage shock protein PspA 574664..575332 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470377.1 CDS pspB NC_020307.1 575392 575616 D phage shock protein B 575392..575616 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470378.1 CDS CFSAN001992_03080 NC_020307.1 575616 575975 D COG1983 Putative stress-responsive transcriptional regulator; DNA-binding transcriptional activator PspC 575616..575975 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470379.1 CDS CFSAN001992_03085 NC_020307.1 575998 576216 D peripheral inner membrane phage-shock protein 575998..576216 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470380.1 CDS CFSAN001992_03090 NC_020307.1 576292 576606 D COG0607 Rhodanese-related sulfurtransferase; thiosulfate:cyanide sulfurtransferase 576292..576606 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470381.1 CDS CFSAN001992_03095 NC_020307.1 576755 578152 D COG3106 Predicted ATPase; hypothetical protein 576755..578152 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470382.1 CDS CFSAN001992_03100 NC_020307.1 578149 579210 D COG3768 Predicted membrane protein; hypothetical protein 578149..579210 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470383.1 CDS CFSAN001992_03105 NC_020307.1 579358 580899 D COG3283 Transcriptional regulator of aromatic amino acids metabolism; DNA-binding transcriptional regulator TyrR 579358..580899 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470384.1 CDS tpx NC_020307.1 580989 581495 R COG2077 Peroxiredoxin; lipid hydroperoxide peroxidase complement(580989..581495) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470385.1 CDS CFSAN001992_03115 NC_020307.1 581611 582576 D COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; L-Ala-D/L-Glu epimerase 581611..582576 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470386.1 CDS CFSAN001992_03120 NC_020307.1 582551 583279 R COG3608 Predicted deacylase; murein peptide amidase A complement(582551..583279) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470387.1 CDS CFSAN001992_03125 NC_020307.1 583469 585082 D COG4166 ABC-type oligopeptide transport system, periplasmic component; murein tripeptide ABC transporter periplasmic substrate-binding protein 583469..585082 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470388.1 CDS CFSAN001992_03130 NC_020307.1 585179 586108 R isoflavone reductase complement(585179..586108) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470389.1 CDS CFSAN001992_03135 NC_020307.1 586228 587133 D COG0583 Transcriptional regulator; regulatory protein LysR:LysR 586228..587133 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470390.1 CDS CFSAN001992_03140 NC_020307.1 587409 588278 D COG0656 Aldo/keto reductases, related to diketogulonate reductase; hypothetical protein 587409..588278 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470391.1 CDS CFSAN001992_03145 NC_020307.1 588369 589082 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase complement(588369..589082) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470392.1 CDS CFSAN001992_03150 NC_020307.1 589160 589750 D COG1309 Transcriptional regulator; TetR family transcriptional regulator 589160..589750 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470393.1 CDS CFSAN001992_03155 NC_020307.1 589879 590115 D putative lipoprotein ygdR Flags: Precursor 589879..590115 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470394.1 CDS CFSAN001992_03160 NC_020307.1 590329 591438 R hypothetical protein complement(590329..591438) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470395.1 CDS CFSAN001992_03165 NC_020307.1 591828 592679 R COG2207 AraC-type DNA-binding domain-containing proteins; regulatory protein complement(591828..592679) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470396.1 CDS CFSAN001992_03170 NC_020307.1 592977 593822 D lipoprotein 592977..593822 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470397.1 CDS CFSAN001992_03175 NC_020307.1 593897 595879 D Invasin 593897..595879 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470398.1 CDS CFSAN001992_03180 NC_020307.1 595906 596730 D hypothetical protein 595906..596730 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470399.1 CDS CFSAN001992_03185 NC_020307.1 596826 597383 D COG2077 Peroxiredoxin; thiol peroxidase 596826..597383 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470400.1 CDS CFSAN001992_03190 NC_020307.1 597490 597828 R COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides; hypothetical protein complement(597490..597828) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470401.1 CDS CFSAN001992_03195 NC_020307.1 597856 598542 R COG3382 Uncharacterized conserved protein; hypothetical protein complement(597856..598542) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470402.1 CDS CFSAN001992_03200 NC_020307.1 598586 599188 D COG1396 Predicted transcriptional regulators; DNA-binding protein 598586..599188 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470403.1 CDS CFSAN001992_03205 NC_020307.1 599270 600301 R COG0668 Small-conductance mechanosensitive channel; MscS family inner membrane protein YnaI complement(599270..600301) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470404.1 CDS CFSAN001992_03210 NC_020307.1 600540 600794 D hypothetical protein 600540..600794 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470405.1 CDS CFSAN001992_03215 NC_020307.1 600849 601796 R COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UspE complement(600849..601796) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470406.1 CDS CFSAN001992_03220 NC_020307.1 601947 602699 R COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; fumarate/nitrate reduction transcriptional regulator complement(601947..602699) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470407.1 CDS CFSAN001992_03225 NC_020307.1 602895 603410 R COG0350 Methylated DNA-protein cysteine methyltransferase; O-6-alkylguanine-DNA:cysteine-protein methyltransferase complement(602895..603410) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470408.1 CDS CFSAN001992_03230 NC_020307.1 603668 604231 D COG2840 Uncharacterized protein conserved in bacteria; UPF0115 protein yfcN 603668..604231 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470409.1 CDS CFSAN001992_03235 NC_020307.1 604642 605796 D COG0840 Methyl-accepting chemotaxis protein; Methyl-accepting chemotaxis protein II MCP-II , Aspartate chemoreceptor protein 604642..605796 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470410.1 CDS zntB NC_020307.1 605942 606925 D COG0598 Mg2+ and Co2+ transporters; zinc transporter 605942..606925 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470411.1 CDS CFSAN001992_03245 NC_020307.1 607201 607383 D hypothetical protein 607201..607383 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470412.1 CDS CFSAN001992_03250 NC_020307.1 607412 608785 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase DbpA 607412..608785 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470413.1 CDS CFSAN001992_03255 NC_020307.1 608829 609764 R COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA 2-thiocytidine biosynthesis protein TtcA complement(608829..609764) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470414.1 CDS CFSAN001992_03260 NC_020307.1 609816 609956 R COG0582 Integrase; phage integrase complement(609816..609956) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470415.1 CDS CFSAN001992_03265 NC_020307.1 609975 610127 D hypothetical protein 609975..610127 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470416.1 CDS CFSAN001992_03270 NC_020307.1 610120 610458 D COG2076 Membrane transporters of cations and cationic drugs; multidrug transporter EmrE 610120..610458 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470417.1 CDS CFSAN001992_03275 NC_020307.1 610508 610942 R COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein F complement(610508..610942) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470418.1 CDS CFSAN001992_03280 NC_020307.1 611156 611365 D hypothetical protein 611156..611365 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470419.1 CDS CFSAN001992_03285 NC_020307.1 611424 614948 R COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; Pyruvate-flavodoxin oxidoreductase complement(611424..614948) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470420.1 CDS CFSAN001992_03290 NC_020307.1 615223 615489 D COG3042 Putative hemolysin; putative cytoplasmic protein 615223..615489 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470421.1 CDS CFSAN001992_03295 NC_020307.1 615533 615943 R COG3187 Heat shock protein; heat-inducible protein complement(615533..615943) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470422.1 CDS CFSAN001992_03300 NC_020307.1 616054 617043 R COG1052 Lactate dehydrogenase and related dehydrogenases; D-lactate dehydrogenase complement(616054..617043) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470423.1 CDS CFSAN001992_03305 NC_020307.1 617310 619946 D hypothetical protein 617310..619946 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470424.1 CDS CFSAN001992_03310 NC_020307.1 619952 620137 D hypothetical protein 619952..620137 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470425.1 CDS CFSAN001992_03315 NC_020307.1 620145 620468 D COG3784 Uncharacterized protein conserved in bacteria; hypothetical protein 620145..620468 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470426.1 CDS CFSAN001992_03320 NC_020307.1 620612 621061 D COG3791 Uncharacterized conserved protein; hypothetical protein 620612..621061 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470427.1 CDS CFSAN001992_03325 NC_020307.1 621058 621663 R COG1182 Acyl carrier protein phosphodiesterase; azoreductase complement(621058..621663) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470428.1 CDS CFSAN001992_03330 NC_020307.1 621921 625766 D COG1643 HrpA-like helicases; ATP-dependent RNA helicase HrpA 621921..625766 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470429.1 CDS CFSAN001992_03335 NC_020307.1 625830 626630 D COG1434 Uncharacterized conserved protein; hypothetical protein 625830..626630 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470430.1 CDS CFSAN001992_03340 NC_020307.1 626747 627277 D COG3038 Cytochrome B561; cytochrome b561 626747..627277 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470431.1 CDS CFSAN001992_03345 NC_020307.1 627548 628210 R COG0500 SAM-dependent methyltransferases; methyltransferase type 12 complement(627548..628210) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470432.1 CDS CFSAN001992_03350 NC_020307.1 628577 628672 D hypothetical protein 628577..628672 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470433.1 CDS CFSAN001992_03355 NC_020307.1 628673 630223 R COG5305 Predicted membrane protein; hypothetical protein complement(628673..630223) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470434.1 CDS CFSAN001992_03360 NC_020307.1 630360 631040 R COG0765 ABC-type amino acid transport system, permease component; Polar amino acid ABC transporter, inner membrane subunit complement(630360..631040) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470435.1 CDS CFSAN001992_03365 NC_020307.1 631037 631768 R COG1126 ABC-type polar amino acid transport system, ATPase component; ABC transporter ATP-binding subunit complement(631037..631768) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470436.1 CDS CFSAN001992_03370 NC_020307.1 631793 632440 R COG0765 ABC-type amino acid transport system, permease component; ABC transporter permease component complement(631793..632440) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470437.1 CDS CFSAN001992_03375 NC_020307.1 632447 633208 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; family 3 extracellular solute-binding protein complement(632447..633208) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470438.1 CDS CFSAN001992_03380 NC_020307.1 634134 634478 D COG3326 Predicted membrane protein; cyanate transport 634134..634478 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470439.1 CDS CFSAN001992_03385 NC_020307.1 634599 635825 R COG3240 Phospholipase/lecithinase/hemolysin; pathogenicity island 2 effector protein SseJ complement(634599..635825) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470440.1 CDS CFSAN001992_03390 NC_020307.1 636251 636790 D hypothetical protein 636251..636790 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470441.1 CDS CFSAN001992_03395 NC_020307.1 638017 638292 D COG1937 Uncharacterized protein conserved in bacteria; Transcriptional repressor frmR 638017..638292 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470442.1 CDS CFSAN001992_03400 NC_020307.1 638324 639442 D COG1062 Zn-dependent alcohol dehydrogenases, class III; S-(hydroxymethyl)glutathione dehydrogenase 638324..639442 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470443.1 CDS CFSAN001992_03405 NC_020307.1 639612 641237 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein III 639612..641237 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470444.1 CDS CFSAN001992_03410 NC_020307.1 641298 642221 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(641298..642221) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470445.1 CDS CFSAN001992_03415 NC_020307.1 642514 643857 D COG5383 Uncharacterized protein conserved in bacteria; hypothetical protein 642514..643857 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470446.1 CDS CFSAN001992_03420 NC_020307.1 643906 645414 D COG2272 Carboxylesterase type B; esterase 643906..645414 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470447.1 CDS mdoD NC_020307.1 645634 647289 D COG3131 Periplasmic glucans biosynthesis protein; glucan biosynthesis protein D 645634..647289 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470448.1 CDS CFSAN001992_03430 NC_020307.1 647494 648012 D COG2353 Uncharacterized conserved protein; hypothetical protein 647494..648012 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470449.1 CDS CFSAN001992_03435 NC_020307.1 648071 649270 D COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases; L-lactate oxidase 648071..649270 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470450.1 CDS CFSAN001992_03440 NC_020307.1 649320 649757 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; aminoglycoside 6'-N-acetyltransferase Iz complement(649320..649757) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470451.1 CDS CFSAN001992_03445 NC_020307.1 649757 650548 R COG1349 Transcriptional regulators of sugar metabolism; regulatory protein complement(649757..650548) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470452.1 CDS CFSAN001992_03450 NC_020307.1 650564 651196 R COG0036 Pentose-5-phosphate-3-epimerase; epimerase complement(650564..651196) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470453.1 CDS CFSAN001992_03455 NC_020307.1 651208 651645 R COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS system transporter subunit IIA complement(651208..651645) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470454.1 CDS CFSAN001992_03460 NC_020307.1 651777 652583 R COG0434 Predicted TIM-barrel enzyme; hypothetical protein complement(651777..652583) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470455.1 CDS CFSAN001992_03465 NC_020307.1 652597 653910 R COG3775 Phosphotransferase system, galactitol-specific IIC component; putative phosphotransferase enzyme complement(652597..653910) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470456.1 CDS CFSAN001992_03470 NC_020307.1 653921 654202 R COG3414 Phosphotransferase system, galactitol-specific IIB component; putative phosphotransferase enzyme complement(653921..654202) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470457.1 CDS CFSAN001992_03475 NC_020307.1 654199 655317 R COG1363 Cellulase M and related proteins; sgc region protein SgcX complement(654199..655317) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470458.1 CDS CFSAN001992_03480 NC_020307.1 655534 656073 D COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; ribosomal-protein-L7/L12-serine acetyltransferase 655534..656073 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470459.1 CDS CFSAN001992_03485 NC_020307.1 656070 657050 R COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); putative acetyltransferase ydcK complement(656070..657050) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470460.1 CDS CFSAN001992_03490 NC_020307.1 657157 658170 D COG1275 Tellurite resistance protein and related permeases; potassium-tellurite ethidium and proflavin transporter 657157..658170 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470461.1 CDS CFSAN001992_03495 NC_020307.1 658157 658753 D COG0500 SAM-dependent methyltransferases; tellurite resistance protein TehB 658157..658753 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470462.1 CDS CFSAN001992_03500 NC_020307.1 658909 659577 D lipoprotein 658909..659577 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470463.1 CDS CFSAN001992_03505 NC_020307.1 659631 660809 R COG3135 Uncharacterized protein involved in benzoate metabolism; benzoate membrane transport protein complement(659631..660809) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470464.1 CDS CFSAN001992_03510 NC_020307.1 660901 661437 D COG1396 Predicted transcriptional regulators; transcriptional regulator XRE 660901..661437 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470465.1 CDS CFSAN001992_03515 NC_020307.1 661516 663480 D COG0826 Collagenase and related proteases; putative peptidase 661516..663480 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470466.1 CDS CFSAN001992_03520 NC_020307.1 663481 663711 R hypothetical protein complement(663481..663711) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470467.1 CDS sifB NC_020307.1 663984 664934 R secreted effector protein SifB complement(663984..664934) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470468.1 CDS CFSAN001992_03530 NC_020307.1 665450 665848 D hypothetical protein 665450..665848 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470469.1 CDS CFSAN001992_03535 NC_020307.1 666373 667143 D COG2173 D-alanyl-D-alanine dipeptidase; D-alanyl-D-alanine dipeptidase 666373..667143 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470470.1 CDS CFSAN001992_03540 NC_020307.1 667279 668703 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; aminotransferase, classes I and II superfamily protein 667279..668703 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470471.1 CDS CFSAN001992_03545 NC_020307.1 668839 670263 D COG1012 NAD-dependent aldehyde dehydrogenases; gamma-aminobutyraldehyde dehydrogenase 668839..670263 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470472.1 CDS CFSAN001992_03550 NC_020307.1 670368 670463 R hypothetical protein complement(670368..670463) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470473.1 CDS CFSAN001992_03555 NC_020307.1 670662 670835 D inner membrane protein 670662..670835 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470474.1 CDS CFSAN001992_03560 NC_020307.1 670869 673013 R COG4458 Uncharacterized protein conserved in bacteria, putative virulence factor; overlaps another CDS with the same product name; virulence effector protein complement(670869..673013) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470475.1 CDS CFSAN001992_03565 NC_020307.1 673010 675991 R COG4457 Uncharacterized protein conserved in bacteria, putative virulence factor; overlaps another CDS with the same product name; virulence effector protein complement(673010..675991) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470476.1 CDS CFSAN001992_03570 NC_020307.1 675996 677315 R Putative virulence effector protein complement(675996..677315) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470477.1 CDS CFSAN001992_03575 NC_020307.1 677539 677772 D hypothetical protein 677539..677772 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470478.1 CDS CFSAN001992_03580 NC_020307.1 677777 678226 R COG3238 Uncharacterized protein conserved in bacteria; hypothetical protein complement(677777..678226) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470479.1 CDS CFSAN001992_03585 NC_020307.1 678226 678741 R COG1247 Sortase and related acyltransferases; acetyltransferase complement(678226..678741) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470480.1 CDS CFSAN001992_03590 NC_020307.1 678953 679990 D COG2130 Putative NADP-dependent oxidoreductases; NADP-dependent oxidoreductase 678953..679990 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470481.1 CDS CFSAN001992_03595 NC_020307.1 680324 680989 D COG1802 Transcriptional regulators; colanic acid/biofilm transcriptional regulator 680324..680989 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470482.1 CDS CFSAN001992_03600 NC_020307.1 681045 683165 R COG1629 Outer membrane receptor proteins, mostly Fe transport; TonB-dependent receptor yncD complement(681045..683165) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470483.1 CDS CFSAN001992_03605 NC_020307.1 683429 684490 D COG3391 Uncharacterized conserved protein; hypothetical protein 683429..684490 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470484.1 CDS CFSAN001992_03610 NC_020307.1 684635 684856 D putative lipoprotein ygdR Flags: Precursor 684635..684856 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470485.1 CDS CFSAN001992_03615 NC_020307.1 684933 686426 R COG1113 Gamma-aminobutyrate permease and related permeases; L-asparagine permease complement(684933..686426) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470486.1 CDS CFSAN001992_03620 NC_020307.1 686939 687571 D hypothetical protein 686939..687571 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470487.1 CDS CFSAN001992_03625 NC_020307.1 687854 688699 D COG2162 Arylamine N-acetyltransferase; N-hydroxyarylamine O-acetyltransferase 687854..688699 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470488.1 CDS CFSAN001992_03630 NC_020307.1 688735 689628 R COG0384 Predicted epimerase, PhzC/PhzF homolog; hypothetical protein complement(688735..689628) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470489.1 CDS CFSAN001992_03635 NC_020307.1 689734 690414 R COG2181 Nitrate reductase gamma subunit; nitrate reductase 2 subunit gamma complement(689734..690414) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470490.1 CDS CFSAN001992_03640 NC_020307.1 690411 691106 R COG2180 Nitrate reductase delta subunit; nitrate reductase 2 subunit delta complement(690411..691106) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470491.1 CDS narY NC_020307.1 691106 692650 R COG1140 Nitrate reductase beta subunit; nitrate reductase Z subunit beta complement(691106..692650) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470492.1 CDS narZ NC_020307.1 692647 696387 R COG5013 Nitrate reductase alpha subunit; nitrate reductase Z subunit alpha complement(692647..696387) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470493.1 CDS CFSAN001992_03655 NC_020307.1 696479 697867 R COG2223 Nitrate/nitrite transporter; nitrate/nitrite transport protein NarU complement(696479..697867) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470494.1 CDS CFSAN001992_03660 NC_020307.1 698082 698660 R COG1309 Transcriptional regulator; TetR family transcriptional regulator complement(698082..698660) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470495.1 CDS CFSAN001992_03665 NC_020307.1 698778 700265 D COG0477 Permeases of the major facilitator superfamily; methyl viologen resistance protein SmvA 698778..700265 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470496.1 CDS CFSAN001992_03670 NC_020307.1 700290 700730 R COG3791 Uncharacterized conserved protein; hypothetical protein complement(700290..700730) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470497.1 CDS CFSAN001992_03675 NC_020307.1 700814 701902 R COG3203 Outer membrane protein (porin); outer membrane protein complement(700814..701902) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470498.1 CDS CFSAN001992_03680 NC_020307.1 702429 703310 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; aromatic amino acid exporter complement(702429..703310) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470499.1 CDS CFSAN001992_03695 NC_020307.1 706649 707533 D COG0437 Fe-S-cluster-containing hydrogenase components 1; formate dehydrogenase-N subunit beta 706649..707533 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470500.1 CDS CFSAN001992_03700 NC_020307.1 707526 708182 D COG2864 Cytochrome b subunit of formate dehydrogenase; formate dehydrogenase-N subunit gamma 707526..708182 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470501.1 CDS CFSAN001992_03705 NC_020307.1 708273 709283 R COG1064 Zn-dependent alcohol dehydrogenases; ethanol-active dehydrogenase/acetaldehyde-active reductase complement(708273..709283) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470502.1 CDS CFSAN001992_03710 NC_020307.1 709565 711262 R COG0281 Malic enzyme; malate dehydrogenase complement(709565..711262) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470503.1 CDS rpsV NC_020307.1 711439 711582 R 30S ribosomal subunit S22 complement(711439..711582) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470504.1 CDS CFSAN001992_03720 NC_020307.1 711677 711892 R biofilm-dependent modulation protein complement(711677..711892) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470505.1 CDS CFSAN001992_03725 NC_020307.1 712404 712835 D COG1764 Predicted redox protein, regulator of disulfide bond formation; peroxiredoxin OsmC 712404..712835 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470506.1 CDS CFSAN001992_03740 NC_020307.1 714002 714637 R hypothetical protein complement(714002..714637) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470507.1 CDS hdeB NC_020307.1 715404 715733 D acid-resistance protein 715404..715733 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470508.1 CDS CFSAN001992_03750 NC_020307.1 715876 716661 D hypothetical protein 715876..716661 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470509.1 CDS CFSAN001992_03755 NC_020307.1 716790 718574 D COG0296 1,4-alpha-glucan branching enzyme; Malto-oligosyltrehalose trehalohydrolase 716790..718574 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470510.1 CDS CFSAN001992_03760 NC_020307.1 718571 721099 D COG3280 Maltooligosyl trehalose synthase; hydrolase 718571..721099 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470511.1 CDS CFSAN001992_03765 NC_020307.1 721156 723231 D COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; putative glycogen debranching protein 721156..723231 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470512.1 CDS CFSAN001992_03770 NC_020307.1 723345 724547 R COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; putative aminotransferase complement(723345..724547) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470513.1 CDS CFSAN001992_03775 NC_020307.1 724560 726011 R COG1757 Na+/H+ antiporter; Na+/H+ antiporter NhaC complement(724560..726011) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470514.1 CDS CFSAN001992_03780 NC_020307.1 726155 727162 R COG1609 Transcriptional regulators; LacI family transcriptional regulator complement(726155..727162) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470515.1 CDS CFSAN001992_03785 NC_020307.1 727423 728886 D putative coiled-coil protein 727423..728886 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470516.1 CDS CFSAN001992_03790 NC_020307.1 728997 729224 D hypothetical protein 728997..729224 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470517.1 CDS CFSAN001992_03795 NC_020307.1 729359 729646 D hypothetical protein 729359..729646 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470518.1 CDS CFSAN001992_03800 NC_020307.1 730059 730211 D COG1943 Transposase and inactivated derivatives; transposase for insertion sequence element IS200 730059..730211 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470519.1 CDS CFSAN001992_03805 NC_020307.1 730546 730956 R COG2070 Dioxygenases related to 2-nitropropane dioxygenase; 2-nitropropane dioxygenase complement(730546..730956) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470520.1 CDS CFSAN001992_03810 NC_020307.1 731092 732000 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(731092..732000) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470521.1 CDS CFSAN001992_03815 NC_020307.1 732402 732605 D hypothetical protein 732402..732605 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470522.1 CDS CFSAN001992_03820 NC_020307.1 732880 733212 R hypothetical protein complement(732880..733212) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470523.1 CDS CFSAN001992_03825 NC_020307.1 733202 733417 R putative phage-related secreted protein complement(733202..733417) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470524.1 CDS CFSAN001992_03830 NC_020307.1 733569 733817 D COG2161 Antitoxin of toxin-antitoxin stability system; RelB/StbD replicon stabilization protein (antitoxin to RelE/StbE) 733569..733817 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470525.1 CDS CFSAN001992_03835 NC_020307.1 733807 734091 D COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; stability protein StbE 733807..734091 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470526.1 CDS CFSAN001992_03840 NC_020307.1 734263 734652 D COG0251 Putative translation initiation inhibitor, yjgF family; hypothetical protein 734263..734652 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470527.1 CDS CFSAN001992_03845 NC_020307.1 734710 735783 R COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); isomerase complement(734710..735783) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470528.1 CDS CFSAN001992_03850 NC_020307.1 735976 736464 R COG1846 Transcriptional regulators; transcriptional regulator, MarR family protein complement(735976..736464) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470529.1 CDS CFSAN001992_03855 NC_020307.1 736509 738017 D COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; hypothetical protein 736509..738017 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470530.1 CDS CFSAN001992_03860 NC_020307.1 738007 739248 D COG0477 Permeases of the major facilitator superfamily; multidrug efflux protein 738007..739248 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470531.1 CDS CFSAN001992_03865 NC_020307.1 739384 740874 D COG4287 PhoPQ-activated pathogenicity-related protein; PqaA protein 739384..740874 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470532.1 CDS CFSAN001992_03870 NC_020307.1 741051 742337 D COG0477 Permeases of the major facilitator superfamily; Hexuronate transporter 741051..742337 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470533.1 CDS CFSAN001992_03875 NC_020307.1 742312 743337 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative zinc-type alcohol dehydrogenase protein 742312..743337 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470534.1 CDS CFSAN001992_03880 NC_020307.1 743396 744067 R COG2186 Transcriptional regulators; putative regulatory protein complement(743396..744067) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470535.1 CDS CFSAN001992_03885 NC_020307.1 744233 745324 R COG3049 Penicillin V acylase and related amidases; choloylglycine hydrolase complement(744233..745324) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470536.1 CDS CFSAN001992_03890 NC_020307.1 745752 746855 D COG1740 Ni,Fe-hydrogenase I small subunit; uptake hydrogenase small subunit 745752..746855 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470537.1 CDS CFSAN001992_03895 NC_020307.1 746858 748660 D COG0374 Ni,Fe-hydrogenase I large subunit; hydrogenase-1 large subunit 746858..748660 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470538.1 CDS CFSAN001992_03900 NC_020307.1 748611 749354 D COG1969 Ni,Fe-hydrogenase I cytochrome b subunit; Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC2 748611..749354 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470539.1 CDS CFSAN001992_03905 NC_020307.1 749360 749968 D COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase 1 maturation protease 749360..749968 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470540.1 CDS CFSAN001992_03910 NC_020307.1 749968 750267 D hydrogenase isoenzymes formation protein 749968..750267 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470541.1 CDS CFSAN001992_03915 NC_020307.1 750264 750674 D hydrogenase-1 operon protein HyaE2 750264..750674 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470542.1 CDS CFSAN001992_03920 NC_020307.1 750692 751753 D COG1773 Rubredoxin; hydrogenase-1 operon protein HyaF2 750692..751753 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470543.1 CDS CFSAN001992_03925 NC_020307.1 751741 752628 D COG0374 Ni,Fe-hydrogenase I large subunit; dehydrogenase protein 751741..752628 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470544.1 CDS CFSAN001992_03930 NC_020307.1 752641 752982 D COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase 752641..752982 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470545.1 CDS CFSAN001992_03935 NC_020307.1 753123 754241 R COG3203 Outer membrane protein (porin); outer membrane protein N complement(753123..754241) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470546.1 CDS CFSAN001992_03940 NC_020307.1 754958 755500 D putative outer membrane protein 754958..755500 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470547.1 CDS CFSAN001992_03945 NC_020307.1 755556 756470 R COG3781 Predicted membrane protein; hypothetical protein complement(755556..756470) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470548.1 CDS CFSAN001992_03950 NC_020307.1 756727 757086 R hypothetical protein complement(756727..757086) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470549.1 CDS CFSAN001992_03955 NC_020307.1 757086 758012 R COG2066 Glutaminase; glutaminase complement(757086..758012) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470550.1 CDS CFSAN001992_03960 NC_020307.1 758085 759473 R COG1012 NAD-dependent aldehyde dehydrogenases; succinate semialdehyde dehydrogenase complement(758085..759473) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470551.1 CDS CFSAN001992_03965 NC_020307.1 759576 760448 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 759576..760448 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470552.1 CDS CFSAN001992_03970 NC_020307.1 760564 761754 D COG2814 Arabinose efflux permease; arabinose transporter 760564..761754 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470553.1 CDS CFSAN001992_03975 NC_020307.1 761801 762466 R COG2095 Multiple antibiotic transporter; hypothetical protein complement(761801..762466) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470554.1 CDS CFSAN001992_03980 NC_020307.1 762725 763159 D COG1846 Transcriptional regulators; DNA-binding transcriptional repressor MarR 762725..763159 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470555.1 CDS CFSAN001992_03985 NC_020307.1 763179 763562 D COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional activator MarA 763179..763562 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470556.1 CDS CFSAN001992_03990 NC_020307.1 763924 764823 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; O-acetylserine/cysteine export protein complement(763924..764823) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470557.1 CDS CFSAN001992_03995 NC_020307.1 765053 766240 D COG0477 Permeases of the major facilitator superfamily; transporter 765053..766240 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470558.1 CDS CFSAN001992_04000 NC_020307.1 766488 766583 D hypothetical protein 766488..766583 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470559.1 CDS CFSAN001992_04005 NC_020307.1 766930 767322 R COG3111 Uncharacterized conserved protein; hypothetical protein complement(766930..767322) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470560.1 CDS CFSAN001992_04010 NC_020307.1 767749 768276 D COG1546 Uncharacterized protein (competence- and mitomycin-induced); hypothetical protein 767749..768276 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470561.1 CDS CFSAN001992_04015 NC_020307.1 768396 768578 R COG3729 General stress protein; hypothetical protein complement(768396..768578) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470562.1 CDS CFSAN001992_04020 NC_020307.1 768923 770965 R COG0339 Zn-dependent oligopeptidases; dipeptidyl carboxypeptidase II complement(768923..770965) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470563.1 CDS CFSAN001992_04025 NC_020307.1 771104 771850 D COG4221 Short-chain alcohol dehydrogenase of unknown specificity; malonic semialdehyde reductase 771104..771850 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470564.1 CDS CFSAN001992_04030 NC_020307.1 771980 772666 D COG1802 Transcriptional regulators; Fatty acid metabolism regulator protein 771980..772666 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470565.1 CDS CFSAN001992_04035 NC_020307.1 772847 773050 D hypothetical protein 772847..773050 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470566.1 CDS CFSAN001992_04040 NC_020307.1 773117 774583 R COG0246 Mannitol-1-phosphate/altronate dehydrogenases; Putative D-mannonate oxidoreductase complement(773117..774583) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470567.1 CDS CFSAN001992_04045 NC_020307.1 774727 776106 R COG0477 Permeases of the major facilitator superfamily; putative inner membrane metabolite transport protein ydfJ complement(774727..776106) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470568.1 CDS CFSAN001992_04050 NC_020307.1 776160 777179 R COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; oxidoreductase complement(776160..777179) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470569.1 CDS CFSAN001992_04055 NC_020307.1 777190 778404 R COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; bifunctional D-altronate/D-mannonate dehydratase complement(777190..778404) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470570.1 CDS CFSAN001992_04060 NC_020307.1 778526 778852 R COG1742 Uncharacterized conserved protein; hypothetical protein complement(778526..778852) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470571.1 CDS CFSAN001992_04065 NC_020307.1 779005 779346 D hypothetical protein 779005..779346 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470572.1 CDS CFSAN001992_04070 NC_020307.1 779382 779942 D COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; spermidine N1-acetyltransferase 779382..779942 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470573.1 CDS CFSAN001992_04075 NC_020307.1 779983 780693 R lipoprotein complement(779983..780693) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470574.1 CDS CFSAN001992_04080 NC_020307.1 780800 781105 D hypothetical protein 780800..781105 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470575.1 CDS CFSAN001992_04085 NC_020307.1 781262 783700 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; anaerobic dimethyl sulfoxide reductase chain a 781262..783700 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470576.1 CDS CFSAN001992_04090 NC_020307.1 783798 786233 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; anaerobic dimethyl sulfoxide reductase subunit A 783798..786233 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470577.1 CDS CFSAN001992_04095 NC_020307.1 786244 786861 D COG0437 Fe-S-cluster-containing hydrogenase components 1; dimethylsulfoxide reductase subunit B 786244..786861 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470578.1 CDS CFSAN001992_04100 NC_020307.1 786863 787720 D COG3302 DMSO reductase anchor subunit; dmso reductase anchor subunit 786863..787720 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470579.1 CDS CFSAN001992_04105 NC_020307.1 787763 788377 D COG3381 Uncharacterized component of anaerobic dehydrogenases; twin-argninine leader-binding protein DmsD 787763..788377 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470580.1 CDS CFSAN001992_04110 NC_020307.1 788682 789392 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; binding-protein-dependent transport system inner membrane protein 788682..789392 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470581.1 CDS CFSAN001992_04115 NC_020307.1 789421 790323 D COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein); Glycine betaine/carnitine/choline-binding protein Osmoprotectant-binding protein , Flags: Precursor 789421..790323 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470582.1 CDS CFSAN001992_04120 NC_020307.1 790333 790980 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; ABC transporter membrane protein 790333..790980 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470583.1 CDS CFSAN001992_04125 NC_020307.1 790980 792128 D COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; ABC glycine betaine/L-proline transporter, ATPase subunit 790980..792128 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470584.1 CDS CFSAN001992_04130 NC_020307.1 792300 793553 D COG0038 Chloride channel protein EriC; voltage-gated ClC-type chloride channel ClcB 792300..793553 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470585.1 CDS CFSAN001992_04135 NC_020307.1 793509 794204 R COG0132 Dethiobiotin synthetase; dithiobiotin synthetase complement(793509..794204) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470586.1 CDS CFSAN001992_04140 NC_020307.1 794330 795550 R COG1940 Transcriptional regulator/sugar kinase; DNA-binding transcriptional repressor DgsA complement(794330..795550) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470587.1 CDS CFSAN001992_04145 NC_020307.1 795678 796577 R COG0583 Transcriptional regulator; putative HTH-type transcriptional regulator ywbI complement(795678..796577) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470588.1 CDS CFSAN001992_04150 NC_020307.1 796697 797950 D COG0477 Permeases of the major facilitator superfamily; membrane transport protein 796697..797950 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470589.1 CDS CFSAN001992_04155 NC_020307.1 798345 798593 D acid shock protein precursor 798345..798593 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470590.1 CDS CFSAN001992_04160 NC_020307.1 798993 799682 D COG3591 V8-like Glu-specific endopeptidase; peptidase S1 and S6 chymotrypsin/Hap 798993..799682 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470591.1 CDS CFSAN001992_04165 NC_020307.1 799722 800051 R COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux system protein MdtI complement(799722..800051) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470592.1 CDS CFSAN001992_04170 NC_020307.1 800038 800400 R COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux system protein MdtJ complement(800038..800400) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470593.1 CDS tqsA NC_020307.1 800818 801852 D COG0628 Predicted permease; pheromone autoinducer 2 transporter 800818..801852 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470594.1 CDS pntB NC_020307.1 802027 803415 R COG1282 NAD/NADP transhydrogenase beta subunit; pyridine nucleotide transhydrogenase complement(802027..803415) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470595.1 CDS pntA NC_020307.1 803426 804955 R COG3288 NAD/NADP transhydrogenase alpha subunit; NAD(P) transhydrogenase subunit alpha complement(803426..804955) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470596.1 CDS CFSAN001992_04190 NC_020307.1 805483 806427 D hypothetical protein 805483..806427 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470597.1 CDS CFSAN001992_04195 NC_020307.1 806725 808107 D COG0531 Amino acid transporters; arginine/ornithine antiporter 806725..808107 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470598.1 CDS CFSAN001992_04200 NC_020307.1 808169 808504 R COG3136 Uncharacterized membrane protein required for alginate biosynthesis; GlpM family protein complement(808169..808504) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470599.1 CDS CFSAN001992_04205 NC_020307.1 808631 809362 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator RstA 808631..809362 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470600.1 CDS CFSAN001992_04210 NC_020307.1 809540 809725 R hypothetical protein complement(809540..809725) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470601.1 CDS CFSAN001992_04215 NC_020307.1 809842 810993 D COG3203 Outer membrane protein (porin); outer membrane protein N 809842..810993 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470602.1 CDS CFSAN001992_04220 NC_020307.1 811152 812852 D COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold; amidohydrolase family protein 811152..812852 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470603.1 CDS CFSAN001992_04225 NC_020307.1 812963 814264 D COG0642 Signal transduction histidine kinase; sensor protein RstB 812963..814264 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470604.1 CDS CFSAN001992_04230 NC_020307.1 814340 815269 D DNA replication terminus site-binding protein 814340..815269 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470605.1 CDS fumC NC_020307.1 815266 816669 R COG0114 Fumarase; fumarate hydratase complement(815266..816669) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470606.1 CDS CFSAN001992_04240 NC_020307.1 816837 818483 R COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; fumarate hydratase FumA complement(816837..818483) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470607.1 CDS CFSAN001992_04245 NC_020307.1 818683 819858 D COG1482 Phosphomannose isomerase; mannose-6-phosphate isomerase 818683..819858 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470608.1 CDS CFSAN001992_04250 NC_020307.1 819961 821469 D COG5339 Uncharacterized protein conserved in bacteria; hypothetical protein 819961..821469 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470609.1 CDS CFSAN001992_04255 NC_020307.1 821527 822555 R COG1609 Transcriptional regulators; DNA-binding transcriptional repressor MalI complement(821527..822555) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470610.1 CDS CFSAN001992_04260 NC_020307.1 822728 824320 D COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; bifunctional PTS system maltose and glucose-specific transporter subunits IICB 822728..824320 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470611.1 CDS CFSAN001992_04265 NC_020307.1 824330 825502 D COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; bifunctional beta-cystathionase/maltose regulon regulatory protein 824330..825502 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470612.1 CDS CFSAN001992_04270 NC_020307.1 825720 826721 D COG1816 Adenosine deaminase; adenosine deaminase 825720..826721 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470613.1 CDS CFSAN001992_04275 NC_020307.1 826796 827836 R COG0673 Predicted dehydrogenases and related proteins; oxidoreductase complement(826796..827836) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470614.1 CDS CFSAN001992_04280 NC_020307.1 828044 828169 D hypothetical protein 828044..828169 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470615.1 CDS CFSAN001992_04285 NC_020307.1 828468 828683 D oriC-binding nucleoid-associated protein 828468..828683 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470616.1 CDS CFSAN001992_04290 NC_020307.1 828772 829212 D hypothetical protein 828772..829212 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470617.1 CDS CFSAN001992_04295 NC_020307.1 829289 829870 D COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA; electron transport complex protein RsxA 829289..829870 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470618.1 CDS CFSAN001992_04300 NC_020307.1 829870 830448 D COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB; electron transport complex protein RnfB 829870..830448 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470619.1 CDS CFSAN001992_04305 NC_020307.1 830441 832630 D COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC; electron transport complex protein RnfC 830441..832630 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470620.1 CDS rnfD NC_020307.1 832631 833689 D COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD; electron transport complex protein RnfD 832631..833689 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470621.1 CDS CFSAN001992_04315 NC_020307.1 833693 834313 D COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG; electron transport complex protein RnfG 833693..834313 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470622.1 CDS CFSAN001992_04320 NC_020307.1 834316 835008 D COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE; electron transport complex RsxE subunit 834316..835008 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470623.1 CDS CFSAN001992_04325 NC_020307.1 835008 835643 D COG0177 Predicted EndoIII-related endonuclease; endonuclease III 835008..835643 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470624.1 CDS tppB NC_020307.1 836245 837750 D COG3104 Dipeptide/tripeptide permease; tripeptide transporter permease 836245..837750 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470625.1 CDS CFSAN001992_04335 NC_020307.1 837855 838460 D COG0625 Glutathione S-transferase; glutathionine S-transferase 837855..838460 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470626.1 CDS CFSAN001992_04340 NC_020307.1 838519 839379 R COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxamine kinase complement(838519..839379) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470627.1 CDS CFSAN001992_04345 NC_020307.1 839439 840713 R COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA ligase complement(839439..840713) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470628.1 CDS CFSAN001992_04350 NC_020307.1 840840 841496 R COG0259 Pyridoxamine-phosphate oxidase; pyridoxamine 5'-phosphate oxidase complement(840840..841496) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470629.1 CDS CFSAN001992_04355 NC_020307.1 841555 841884 R COG3895 Predicted periplasmic protein; lysozyme inhibitor complement(841555..841884) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470630.1 CDS anmK NC_020307.1 841972 843093 R COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases; anhydro-N-acetylmuramic acid kinase complement(841972..843093) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470631.1 CDS CFSAN001992_04365 NC_020307.1 843366 843833 D COG3133 Outer membrane lipoprotein; outer membrane lipoprotein SlyB 843366..843833 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470632.1 CDS CFSAN001992_04370 NC_020307.1 843881 844315 R COG1846 Transcriptional regulators; transcriptional regulator SlyA complement(843881..844315) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470633.1 CDS CFSAN001992_04375 NC_020307.1 844516 844752 D hypothetical protein 844516..844752 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470634.1 CDS CFSAN001992_04380 NC_020307.1 844755 845615 D COG1566 Multidrug resistance efflux pump; auxiliary transport protein, membrane fusion protein (MFP) family protein 844755..845615 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470635.1 CDS CFSAN001992_04385 NC_020307.1 845615 847654 D COG1289 Predicted membrane protein; fusaric acid resistance domain-containing protein 845615..847654 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470636.1 CDS CFSAN001992_04390 NC_020307.1 847630 848151 R COG2032 Cu/Zn superoxide dismutase; superoxide dismutase complement(847630..848151) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470637.1 CDS CFSAN001992_04395 NC_020307.1 848231 849127 R COG4989 Predicted oxidoreductase; hypothetical protein complement(848231..849127) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470638.1 CDS CFSAN001992_04400 NC_020307.1 849178 849417 R COG3313 Predicted Fe-S protein; hypothetical protein complement(849178..849417) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470639.1 CDS CFSAN001992_04405 NC_020307.1 849520 850119 D COG1309 Transcriptional regulator; transcriptional repressor NemR 849520..850119 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470640.1 CDS CFSAN001992_04410 NC_020307.1 850178 851275 D COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; N-ethylmaleimide reductase 850178..851275 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470641.1 CDS CFSAN001992_04415 NC_020307.1 851344 851751 D COG0346 Lactoylglutathione lyase and related lyases; glyoxalase I 851344..851751 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470642.1 CDS CFSAN001992_04420 NC_020307.1 851852 852499 D COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; ribonuclease T 851852..852499 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470643.1 CDS CFSAN001992_04425 NC_020307.1 852577 852924 R COG0278 Glutaredoxin-related protein; glutaredoxin-4 complement(852577..852924) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470644.1 CDS CFSAN001992_04430 NC_020307.1 853637 854011 D COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein 853637..854011 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470645.1 CDS CFSAN001992_04435 NC_020307.1 853897 854079 D COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein 853897..854079 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470646.1 CDS CFSAN001992_04440 NC_020307.1 854206 854787 D COG0605 Superoxide dismutase; superoxide dismutase 854206..854787 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470647.1 CDS CFSAN001992_04445 NC_020307.1 854870 854959 R hypothetical protein complement(854870..854959) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470648.1 CDS CFSAN001992_04450 NC_020307.1 855255 856280 D COG1609 Transcriptional regulators; DNA-binding transcriptional repressor PurR 855255..856280 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470649.1 CDS CFSAN001992_04455 NC_020307.1 856277 857209 R COG0583 Transcriptional regulator; DNA-binding transcriptional regulator complement(856277..857209) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470650.1 CDS CFSAN001992_04460 NC_020307.1 857322 858527 D COG0477 Permeases of the major facilitator superfamily; transporter 857322..858527 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470651.1 CDS CFSAN001992_04465 NC_020307.1 858816 859964 D COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane fatty acyl phospholipid synthase 858816..859964 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470652.1 CDS CFSAN001992_04470 NC_020307.1 860006 860647 R COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha complement(860006..860647) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470653.1 CDS CFSAN001992_04475 NC_020307.1 860864 862237 D COG0534 Na+-driven multidrug efflux pump; multidrug efflux protein 860864..862237 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470654.1 CDS CFSAN001992_04480 NC_020307.1 862720 863778 R COG4792 Type III secretory pathway, component EscU; secretion system apparatus protein SsaU complement(862720..863778) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470655.1 CDS CFSAN001992_04485 NC_020307.1 863775 864554 R COG4791 Type III secretory pathway, component EscT; type III secretion system protein SsaT complement(863775..864554) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470656.1 CDS CFSAN001992_04490 NC_020307.1 864555 864821 R COG4794 Type III secretory pathway, component EscS; type III secretion system protein SsaS complement(864555..864821) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470657.1 CDS CFSAN001992_04495 NC_020307.1 864818 865465 R COG4790 Type III secretory pathway, component EscR; type III secretion system protein YscR complement(864818..865465) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470658.1 CDS CFSAN001992_04500 NC_020307.1 865533 866501 R COG1886 Flagellar motor switch/type III secretory pathway protein; type III secretion system protein SsaQ complement(865533..866501) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470659.1 CDS CFSAN001992_04505 NC_020307.1 866482 866856 R type III secretion system protein SsaP complement(866482..866856) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470660.1 CDS CFSAN001992_04510 NC_020307.1 866837 867214 R type III secretion system protein SsaO complement(866837..867214) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470661.1 CDS CFSAN001992_04515 NC_020307.1 867217 868518 R COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; type III secretion system ATPase SsaN complement(867217..868518) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470662.1 CDS CFSAN001992_04520 NC_020307.1 868508 870553 R COG4789 Type III secretory pathway, component EscV; secretion system apparatus protein SsaV complement(868508..870553) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470663.1 CDS CFSAN001992_04525 NC_020307.1 870538 870906 R type III secretion system protein SsaM complement(870538..870906) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470664.1 CDS CFSAN001992_04530 NC_020307.1 870964 871956 R type III secretion system protein SsaL complement(870964..871956) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470665.1 CDS CFSAN001992_04535 NC_020307.1 871946 872620 R type III secretion system protein SsaK complement(871946..872620) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470666.1 CDS CFSAN001992_04540 NC_020307.1 872617 873165 R Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) complement(872617..873165) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470667.1 CDS CFSAN001992_04545 NC_020307.1 873183 873932 R COG4669 Type III secretory pathway, lipoprotein EscJ; type III secretion system lipoprotein SsaJ complement(873183..873932) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470668.1 CDS CFSAN001992_04550 NC_020307.1 873929 874177 R type III secretion system protein SsaI complement(873929..874177) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470669.1 CDS CFSAN001992_04555 NC_020307.1 874189 874416 R type III secretion system protein SsaH complement(874189..874416) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470670.1 CDS CFSAN001992_04560 NC_020307.1 874457 874672 R type III secretion system needle protein SsaG complement(874457..874672) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470671.1 CDS CFSAN001992_04565 NC_020307.1 874766 875455 R pathogenicity island 2 effector protein SseG complement(874766..875455) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470672.1 CDS CFSAN001992_04570 NC_020307.1 875452 876234 R pathogenicity island 2 effector protein SseF complement(875452..876234) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470673.1 CDS CFSAN001992_04575 NC_020307.1 876250 876684 R COG0457 FOG: TPR repeat; type III secretion system chaperone protein SscB complement(876250..876684) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470674.1 CDS CFSAN001992_04580 NC_020307.1 876736 877152 R pathogenicity island 2 effector protein SseE complement(876736..877152) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470675.1 CDS CFSAN001992_04585 NC_020307.1 877155 877742 R pathogenicity island 2 effector protein SseD complement(877155..877742) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470676.1 CDS CFSAN001992_04590 NC_020307.1 877758 879212 R COG5613 Uncharacterized conserved protein; pathogenicity island 2 effector protein SseC complement(877758..879212) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470677.1 CDS CFSAN001992_04595 NC_020307.1 879215 879688 R COG0457 FOG: TPR repeat; pathogenicity island 2 chaperone protein SscA complement(879215..879688) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470678.1 CDS CFSAN001992_04600 NC_020307.1 879685 880275 R pathogenicity island 2 effector protein SseB complement(879685..880275) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470679.1 CDS CFSAN001992_04605 NC_020307.1 880282 880608 R type III secretion system chaperone SseA complement(880282..880608) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470680.1 CDS CFSAN001992_04610 NC_020307.1 880811 881053 R type III secretion system chaperone SsaE complement(880811..881053) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470681.1 CDS CFSAN001992_04615 NC_020307.1 881061 882272 R type III secretion system protein SsaD complement(881061..882272) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470682.1 CDS CFSAN001992_04620 NC_020307.1 882253 883746 R COG1450 Type II secretory pathway, component PulD; outer membrane secretin SsaC complement(882253..883746) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470683.1 CDS CFSAN001992_04625 NC_020307.1 883748 884149 R pathogenicity island chaperone protein SpiC complement(883748..884149) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470684.1 CDS CFSAN001992_04630 NC_020307.1 884550 887312 D COG0642 Signal transduction histidine kinase; two component system sensor kinase SsrA 884550..887312 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470685.1 CDS CFSAN001992_04635 NC_020307.1 887343 887981 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component system sensor kinase SsrB 887343..887981 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470686.1 CDS CFSAN001992_04640 NC_020307.1 888160 888888 D COG0789 Predicted transcriptional regulators; transcriptional regulator 888160..888888 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470687.1 CDS CFSAN001992_04645 NC_020307.1 889060 890019 D COG1683 Uncharacterized conserved protein; pathogenicity island protein 889060..890019 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470688.1 CDS CFSAN001992_04650 NC_020307.1 890115 890327 R hypothetical protein complement(890115..890327) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470689.1 CDS CFSAN001992_04655 NC_020307.1 890425 891045 R COG4566 Response regulator; response regulator complement(890425..891045) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470690.1 CDS CFSAN001992_04660 NC_020307.1 891020 892249 R COG0642 Signal transduction histidine kinase; hypothetical protein complement(891020..892249) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470691.1 CDS CFSAN001992_04665 NC_020307.1 892419 892655 R COG0642 Signal transduction histidine kinase; sensory histidine kinase complement(892419..892655) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470692.1 CDS CFSAN001992_04670 NC_020307.1 892867 893601 D COG0437 Fe-S-cluster-containing hydrogenase components 1; tetrathionate reductase subunit B 892867..893601 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470693.1 CDS CFSAN001992_04675 NC_020307.1 893602 894624 D tetrathionate reductase subunit C 893602..894624 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470694.1 CDS CFSAN001992_04680 NC_020307.1 894617 897679 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; tetrathionate reductase subunit A 894617..897679 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470695.1 CDS CFSAN001992_04685 NC_020307.1 898002 899228 D COG1349 Transcriptional regulators of sugar metabolism; putative ribokinase 898002..899228 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470696.1 CDS CFSAN001992_04690 NC_020307.1 899240 899977 D COG5426 Uncharacterized membrane protein; hypothetical protein 899240..899977 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470697.1 CDS CFSAN001992_04695 NC_020307.1 900036 900929 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Proline iminopeptidase 900036..900929 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470698.1 CDS CFSAN001992_04700 NC_020307.1 900951 902294 D COG0531 Amino acid transporters; amino acid permease 900951..902294 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470699.1 CDS CFSAN001992_04705 NC_020307.1 902696 904108 D COG0469 Pyruvate kinase; pyruvate kinase 902696..904108 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470700.1 CDS CFSAN001992_04710 NC_020307.1 904419 904655 D COG4238 Murein lipoprotein; murein lipoprotein 904419..904655 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470701.1 CDS CFSAN001992_04715 NC_020307.1 904738 904980 D COG4238 Murein lipoprotein; murein lipoprotein 904738..904980 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470702.1 CDS CFSAN001992_04720 NC_020307.1 905061 905300 D COG4238 Murein lipoprotein; murein lipoprotein 905061..905300 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470703.1 CDS CFSAN001992_04725 NC_020307.1 905367 906368 R COG1376 Uncharacterized protein conserved in bacteria; murein L,D-transpeptidase complement(905367..906368) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470704.1 CDS CFSAN001992_04730 NC_020307.1 906523 906939 R COG2166 SufE protein probably involved in Fe-S center assembly; cysteine desufuration protein SufE complement(906523..906939) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470705.1 CDS CFSAN001992_04735 NC_020307.1 906952 908172 R COG0520 Selenocysteine lyase; bifunctional cysteine desulfurase/selenocysteine lyase complement(906952..908172) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470706.1 CDS CFSAN001992_04740 NC_020307.1 908169 909440 R COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; cysteine desulfurase activator complex subunit SufD complement(908169..909440) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470707.1 CDS sufC NC_020307.1 909415 910161 R COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component; cysteine desulfurase ATPase component complement(909415..910161) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470708.1 CDS CFSAN001992_04750 NC_020307.1 910178 911665 R COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; cysteine desulfurase activator complex subunit SufB complement(910178..911665) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470709.1 CDS sufA NC_020307.1 911674 912042 R COG0316 Uncharacterized conserved protein; iron-sulfur cluster assembly scaffold protein complement(911674..912042) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470710.1 CDS CFSAN001992_04760 NC_020307.1 912469 913815 D COG1823 Predicted Na+/dicarboxylate symporter; putative Na+-dicarboxylate symporter 912469..913815 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470711.1 CDS CFSAN001992_04765 NC_020307.1 914103 914291 R putative cytoplasmic protein complement(914103..914291) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470712.1 CDS CFSAN001992_04770 NC_020307.1 914390 914800 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; acyl-CoA esterase complement(914390..914800) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470713.1 CDS CFSAN001992_04775 NC_020307.1 914797 917853 R COG0277 FAD/FMN-containing dehydrogenases; Fe-S protein, actate dehydrogenase-like protein complement(914797..917853) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470714.1 CDS CFSAN001992_04780 NC_020307.1 918118 919236 D COG0628 Predicted permease; hypothetical protein 918118..919236 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470715.1 CDS CFSAN001992_04785 NC_020307.1 919697 920053 D cytoplasmic protein 919697..920053 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470716.1 CDS CFSAN001992_04790 NC_020307.1 920194 921405 D COG0477 Permeases of the major facilitator superfamily; Inner membrane transport protein ydiN 920194..921405 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470717.1 CDS CFSAN001992_04795 NC_020307.1 921769 923004 D COG0477 Permeases of the major facilitator superfamily; hypothetical protein 921769..923004 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470718.1 CDS CFSAN001992_04800 NC_020307.1 923071 923937 D COG0169 Shikimate 5-dehydrogenase; quinate/shikimate dehydrogenase 923071..923937 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470719.1 CDS aroD NC_020307.1 923982 924740 D COG0710 3-dehydroquinate dehydratase; 3-dehydroquinate dehydratase 923982..924740 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470720.1 CDS CFSAN001992_04810 NC_020307.1 924894 926489 D COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase; propionate CoA-transferase 924894..926489 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470721.1 CDS CFSAN001992_04815 NC_020307.1 926503 927654 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase 926503..927654 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470722.1 CDS CFSAN001992_04820 NC_020307.1 927730 928620 R COG2207 AraC-type DNA-binding domain-containing proteins; putative HTH-type transcriptional regulator ydiP complement(927730..928620) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470723.1 CDS CFSAN001992_04825 NC_020307.1 929083 929847 D COG2086 Electron transfer flavoprotein, beta subunit; hypothetical protein 929083..929847 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470724.1 CDS CFSAN001992_04830 NC_020307.1 929869 930804 D COG2025 Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit YdiR 929869..930804 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470725.1 CDS CFSAN001992_04835 NC_020307.1 930861 932147 D COG0644 Dehydrogenases (flavoproteins); oxidoreductase 930861..932147 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470726.1 CDS CFSAN001992_04840 NC_020307.1 932144 932437 D COG2440 Ferredoxin-like protein; 4Fe-4S ferredoxin 932144..932437 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470727.1 CDS CFSAN001992_04845 NC_020307.1 932527 934167 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; short chain acyl-CoA synthetase 932527..934167 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470728.1 CDS CFSAN001992_04850 NC_020307.1 934209 936587 R COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; phosphoenolpyruvate synthase complement(934209..936587) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470729.1 CDS CFSAN001992_04855 NC_020307.1 936634 936747 D hypothetical protein 936634..936747 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470730.1 CDS CFSAN001992_04860 NC_020307.1 936924 937757 D COG1806 Uncharacterized protein conserved in bacteria; PEP synthetase regulatory protein 936924..937757 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470731.1 CDS CFSAN001992_04865 NC_020307.1 937913 938959 D COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 937913..938959 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470732.1 CDS CFSAN001992_04870 NC_020307.1 939116 939307 D COG4256 Hemin uptake protein; hypothetical protein 939116..939307 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470733.1 CDS CFSAN001992_04875 NC_020307.1 939343 940785 R COG0397 Uncharacterized conserved protein; hypothetical protein complement(939343..940785) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470734.1 CDS CFSAN001992_04880 NC_020307.1 940847 941560 R COG2200 FOG: EAL domain; hypothetical protein complement(940847..941560) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470735.1 CDS CFSAN001992_04885 NC_020307.1 941874 942338 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); lipoprotein nlpC complement(941874..942338) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470736.1 CDS CFSAN001992_04890 NC_020307.1 942415 943164 R COG4138 ABC-type cobalamin transport system, ATPase component; vitamin B12-transporter ATPase complement(942415..943164) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470737.1 CDS btuE NC_020307.1 943164 943715 R COG0386 Glutathione peroxidase; glutathione peroxidase complement(943164..943715) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470738.1 CDS CFSAN001992_04900 NC_020307.1 943807 944787 R COG4139 ABC-type cobalamin transport system, permease component; vtamin B12-transporter permease complement(943807..944787) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470739.1 CDS ihfA NC_020307.1 944990 945289 R COG0776 Bacterial nucleoid DNA-binding protein; integration host factor subunit alpha complement(944990..945289) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470740.1 CDS pheT NC_020307.1 945294 947681 R COG0073 EMAP domain; phenylalanyl-tRNA ligase subunit beta complement(945294..947681) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470741.1 CDS pheS NC_020307.1 947697 948680 R COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA ligase subunit alpha complement(947697..948680) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470742.1 CDS CFSAN001992_04920 NC_020307.1 948982 949338 R COG0292 Ribosomal protein L20; 50S ribosomal protein L20 complement(948982..949338) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470743.1 CDS rpmI NC_020307.1 949389 949586 R COG0291 Ribosomal protein L35; 50S ribosomal protein L35 complement(949389..949586) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470744.1 CDS CFSAN001992_04930 NC_020307.1 949682 950116 R COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 complement(949682..950116) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470745.1 CDS thrS NC_020307.1 950228 952156 R COG0441 Threonyl-tRNA synthetase; threonyl-tRNA ligase complement(950228..952156) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470746.1 CDS CFSAN001992_04940 NC_020307.1 953058 954281 D O-antigen polymerase 953058..954281 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470747.1 CDS CFSAN001992_04945 NC_020307.1 954966 955820 R COG1864 DNA/RNA endonuclease G, NUC1; DNA/RNA non-specific endonuclease complement(954966..955820) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470748.1 CDS CFSAN001992_04950 NC_020307.1 955883 956131 R DNA/RNA non-specific endonuclease complement(955883..956131) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470749.1 CDS CFSAN001992_04955 NC_020307.1 956274 957233 D COG3528 Uncharacterized protein conserved in bacteria; outer membrane protein 956274..957233 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470750.1 CDS CFSAN001992_04960 NC_020307.1 957282 958040 R COG3137 Putative salt-induced outer membrane protein; hypothetical protein complement(957282..958040) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470751.1 CDS CFSAN001992_04965 NC_020307.1 958329 959261 D COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); 6-phosphofructokinase 2 958329..959261 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470752.1 CDS CFSAN001992_04970 NC_020307.1 959358 959648 D hypothetical protein 959358..959648 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470753.1 CDS CFSAN001992_04975 NC_020307.1 959755 960615 D COG3001 Fructosamine-3-kinase; hypothetical protein 959755..960615 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470754.1 CDS CFSAN001992_04980 NC_020307.1 960658 961194 R hypothetical protein complement(960658..961194) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470755.1 CDS CFSAN001992_04985 NC_020307.1 961343 962011 D COG0637 Predicted phosphatase/phosphohexomutase; 2-deoxyglucose-6-phosphatase 961343..962011 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470756.1 CDS CFSAN001992_04990 NC_020307.1 962161 962748 D COG1988 Predicted membrane-bound metal-dependent hydrolases; hypothetical protein 962161..962748 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470757.1 CDS CFSAN001992_04995 NC_020307.1 962885 964276 D COG1823 Predicted Na+/dicarboxylate symporter; sodium:dicarboxylate symporter family protein 962885..964276 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470758.1 CDS CFSAN001992_05000 NC_020307.1 964378 964620 R cell division modulator complement(964378..964620) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470759.1 CDS katE NC_020307.1 964837 967089 D COG0753 Catalase; hydroperoxidase II 964837..967089 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470760.1 CDS CFSAN001992_05010 NC_020307.1 967133 967891 R COG3394 Uncharacterized protein conserved in bacteria; hypothetical protein complement(967133..967891) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470761.1 CDS CFSAN001992_05015 NC_020307.1 967904 969259 R COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases; diacetylchitobiose-6-phosphate hydrolase complement(967904..969259) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470762.1 CDS CFSAN001992_05020 NC_020307.1 969384 970226 R COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator ChbR complement(969384..970226) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470763.1 CDS CFSAN001992_05025 NC_020307.1 970237 970584 R COG1447 Phosphotransferase system cellobiose-specific component IIA; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA complement(970237..970584) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470764.1 CDS CFSAN001992_05030 NC_020307.1 970635 971993 R COG1455 Phosphotransferase system cellobiose-specific component IIC; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC complement(970635..971993) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470765.1 CDS CFSAN001992_05035 NC_020307.1 972076 972396 R COG1440 Phosphotransferase system cellobiose-specific component IIB; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB complement(972076..972396) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470766.1 CDS CFSAN001992_05040 NC_020307.1 972697 973038 R DNA-binding transcriptional activator OsmE complement(972697..973038) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470767.1 CDS nadE NC_020307.1 973257 974084 D COG0171 NAD synthase; NAD synthetase 973257..974084 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470768.1 CDS CFSAN001992_05050 NC_020307.1 974205 975086 D COG0322 Nuclease subunit of the excinuclease complex; nucleotide excision repair endonuclease 974205..975086 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470769.1 CDS CFSAN001992_05055 NC_020307.1 975161 975646 R COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; periplasmic protein complement(975161..975646) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470770.1 CDS CFSAN001992_05060 NC_020307.1 975982 976950 R COG2988 Succinylglutamate desuccinylase; succinylglutamate desuccinylase complement(975982..976950) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470771.1 CDS CFSAN001992_05065 NC_020307.1 976943 978286 R COG3724 Succinylarginine dihydrolase; succinylarginine dihydrolase complement(976943..978286) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470772.1 CDS astD NC_020307.1 978283 979761 R COG1012 NAD-dependent aldehyde dehydrogenases; succinylglutamic semialdehyde dehydrogenase complement(978283..979761) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470773.1 CDS CFSAN001992_05075 NC_020307.1 979758 980792 R COG3138 Arginine/ornithine N-succinyltransferase beta subunit; arginine succinyltransferase complement(979758..980792) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470774.1 CDS CFSAN001992_05080 NC_020307.1 980783 982009 R COG4992 Ornithine/acetylornithine aminotransferase; bifunctional succinylornithine transaminase/acetylornithine transaminase complement(980783..982009) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470775.1 CDS CFSAN001992_05085 NC_020307.1 982455 983261 D COG0708 Exonuclease III; exonuclease III 982455..983261 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470776.1 CDS CFSAN001992_05090 NC_020307.1 983334 983750 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 983334..983750 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470777.1 CDS CFSAN001992_05095 NC_020307.1 983710 983985 R hypothetical protein complement(983710..983985) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470778.1 CDS CFSAN001992_05100 NC_020307.1 984224 985567 D COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase 984224..985567 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470779.1 CDS CFSAN001992_05105 NC_020307.1 985597 987546 R COG0550 Topoisomerase IA; DNA topoisomerase III complement(985597..987546) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470780.1 CDS CFSAN001992_05110 NC_020307.1 987551 988594 R COG0709 Selenophosphate synthase; selenophosphate synthetase complement(987551..988594) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470781.1 CDS CFSAN001992_05115 NC_020307.1 988712 989263 R COG0778 Nitroreductase; oxidoreductase complement(988712..989263) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470782.1 CDS CFSAN001992_05120 NC_020307.1 989437 991293 D COG0616 Periplasmic serine proteases (ClpP class); protease 4 989437..991293 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470783.1 CDS ansA NC_020307.1 991389 992405 D COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; cytoplasmic asparaginase I 991389..992405 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470784.1 CDS CFSAN001992_05130 NC_020307.1 992432 993088 D COG1335 Amidases related to nicotinamidase; nicotinamidase/pyrazinamidase 992432..993088 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470785.1 CDS CFSAN001992_05135 NC_020307.1 993439 993717 R COG3139 Uncharacterized protein conserved in bacteria; hypothetical protein complement(993439..993717) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470786.1 CDS CFSAN001992_05140 NC_020307.1 993759 994172 R COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; methionine sulfoxide reductase B complement(993759..994172) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470787.1 CDS gapA NC_020307.1 994514 995509 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase A 994514..995509 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470788.1 CDS CFSAN001992_05150 NC_020307.1 995662 995838 D hypothetical protein 995662..995838 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470789.1 CDS CFSAN001992_05155 NC_020307.1 995838 996722 D COG0676 Uncharacterized enzymes related to aldose 1-epimerase; aldose 1-epimerase 995838..996722 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470790.1 CDS CFSAN001992_05160 NC_020307.1 996821 997678 R COG0656 Aldo/keto reductases, related to diketogulonate reductase; oxidoreductase complement(996821..997678) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470791.1 CDS CFSAN001992_05165 NC_020307.1 997775 998971 R COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); chondroitin sulfate/heparin utilization regulation protein complement(997775..998971) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470792.1 CDS CFSAN001992_05170 NC_020307.1 999261 1000007 R COG3713 Outer membrane protein V; MltA-interacting protein MipA complement(999261..1000007) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470793.1 CDS CFSAN001992_05175 NC_020307.1 1000434 1002368 D COG2766 Putative Ser protein kinase; PrkA family serine protein kinase 1000434..1002368 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470794.1 CDS CFSAN001992_05180 NC_020307.1 1002491 1003777 D COG2718 Uncharacterized conserved protein; hypothetical protein 1002491..1003777 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470795.1 CDS CFSAN001992_05185 NC_020307.1 1004423 1005916 D COG2199 FOG: GGDEF domain; ggdef domain-containing protein 1004423..1005916 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470796.1 CDS CFSAN001992_05190 NC_020307.1 1005957 1006484 D COG2606 Uncharacterized conserved protein; hypothetical protein 1005957..1006484 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470797.1 CDS CFSAN001992_05195 NC_020307.1 1006481 1006588 R putative inner membrane protein complement(1006481..1006588) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470798.1 CDS CFSAN001992_05200 NC_020307.1 1006794 1007240 D COG2707 Predicted membrane protein; hypothetical protein 1006794..1007240 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470799.1 CDS CFSAN001992_05205 NC_020307.1 1007220 1008014 R COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator complement(1007220..1008014) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470800.1 CDS CFSAN001992_05210 NC_020307.1 1008115 1009299 D COG2807 Cyanate permease; inner membrane transport protein YeaN 1008115..1009299 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470801.1 CDS CFSAN001992_05215 NC_020307.1 1009418 1009765 D COG3189 Uncharacterized conserved protein; hypothetical protein 1009418..1009765 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470802.1 CDS CFSAN001992_05220 NC_020307.1 1009751 1010062 R hypothetical protein complement(1009751..1010062) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470803.1 CDS CFSAN001992_05225 NC_020307.1 1010131 1010382 R COG3042 Putative hemolysin; hemolysin complement(1010131..1010382) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470804.1 CDS CFSAN001992_05230 NC_020307.1 1010815 1011063 R COG2261 Predicted membrane protein; hypothetical protein complement(1010815..1011063) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470805.1 CDS CFSAN001992_05235 NC_020307.1 1011377 1012018 R hypothetical protein complement(1011377..1012018) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470806.1 CDS CFSAN001992_05240 NC_020307.1 1012248 1012430 R Protein yoaG complement(1012248..1012430) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470807.1 CDS CFSAN001992_05245 NC_020307.1 1012433 1012795 R COG3615 Uncharacterized protein/domain, possibly involved in tellurite resistance; hypothetical protein complement(1012433..1012795) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470808.1 CDS CFSAN001992_05250 NC_020307.1 1012968 1013606 R COG1280 Putative threonine efflux protein; leucine export protein LeuE complement(1012968..1013606) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470809.1 CDS CFSAN001992_05255 NC_020307.1 1013803 1014348 R COG1605 Chorismate mutase; chorismate mutase complement(1013803..1014348) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470810.1 CDS CFSAN001992_05260 NC_020307.1 1014664 1014912 D putative 9.1 kDa protein in spaS 3'region SPA-ORF10 , ORF-10 1014664..1014912 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470811.1 CDS CFSAN001992_05265 NC_020307.1 1015167 1016015 R COG0789 Predicted transcriptional regulators; transcriptional regulator complement(1015167..1016015) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470812.1 CDS CFSAN001992_05270 NC_020307.1 1016084 1016677 R COG2771 DNA-binding HTH domain-containing proteins; regulatory protein complement(1016084..1016677) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470813.1 CDS CFSAN001992_05275 NC_020307.1 1016822 1017610 R COG1708 Predicted nucleotidyltransferases; aminoglycoside resistance protein complement(1016822..1017610) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470814.1 CDS CFSAN001992_05280 NC_020307.1 1017719 1018369 R COG3443 Predicted periplasmic or secreted protein; zinc/cadmium-binding protein complement(1017719..1018369) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470815.1 CDS CFSAN001992_05285 NC_020307.1 1018564 1018890 R COG1145 Ferredoxin; ferredoxin complement(1018564..1018890) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470816.1 CDS CFSAN001992_05290 NC_020307.1 1019084 1020217 D COG0668 Small-conductance mechanosensitive channel; putative mscS family protein 1019084..1020217 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470817.1 CDS CFSAN001992_05295 NC_020307.1 1020299 1020889 R COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; ATP-binding protein of ABC transport system complement(1020299..1020889) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470818.1 CDS CFSAN001992_05300 NC_020307.1 1020883 1021680 R COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; ABC nickel/di-oligopepetide transporter, ATP binding subunit complement(1020883..1021680) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470819.1 CDS CFSAN001992_05305 NC_020307.1 1021674 1022486 R COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; nickel/di-oligopepetide ABC transporter permease subunit complement(1021674..1022486) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470820.1 CDS CFSAN001992_05310 NC_020307.1 1022476 1023450 R COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; ABC-type dipeptide/oligopeptide/nickel transporter permease component complement(1022476..1023450) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470821.1 CDS CFSAN001992_05315 NC_020307.1 1023450 1025084 R COG0747 ABC-type dipeptide transport system, periplasmic component; nickel ABC transporter periplasmic nickel-binding protein complement(1023450..1025084) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470822.1 CDS CFSAN001992_05320 NC_020307.1 1025766 1026080 D Protein trl tRNA-associated locus protein 1025766..1026080 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470823.1 CDS CFSAN001992_05325 NC_020307.1 1026229 1026759 D COG3038 Cytochrome B561; hypothetical protein 1026229..1026759 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470824.1 CDS CFSAN001992_05330 NC_020307.1 1026842 1027885 R COG4692 Predicted neuraminidase (sialidase); cytoplasmic protein complement(1026842..1027885) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470825.1 CDS CFSAN001992_05335 NC_020307.1 1028224 1028694 R COG0071 Molecular chaperone (small heat shock protein); heat shock protein complement(1028224..1028694) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470826.1 CDS CFSAN001992_05340 NC_020307.1 1029011 1029184 D hypothetical protein 1029011..1029184 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470827.1 CDS CFSAN001992_05345 NC_020307.1 1029328 1029453 R putative lipoprotein complement(1029328..1029453) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470828.1 CDS CFSAN001992_05350 NC_020307.1 1029831 1030175 D lysozyme inhibitor 1029831..1030175 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470829.1 CDS CFSAN001992_05355 NC_020307.1 1031412 1031969 R Attachment invasion locus protein precursor complement(1031412..1031969) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470830.1 CDS CFSAN001992_05360 NC_020307.1 1032536 1032727 R hypothetical protein complement(1032536..1032727) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470831.1 CDS CFSAN001992_05365 NC_020307.1 1033180 1033392 D COG1278 Cold shock proteins; cold shock-like protein CspF 1033180..1033392 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470832.1 CDS CFSAN001992_05370 NC_020307.1 1033809 1034330 D lipoprotein 1033809..1034330 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470833.1 CDS CFSAN001992_05375 NC_020307.1 1034521 1034760 D virulence protein (MsgA) 1034521..1034760 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470834.1 CDS CFSAN001992_05380 NC_020307.1 1034978 1035142 R COG2801 Transposase and inactivated derivatives; transposase complement(1034978..1035142) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470835.1 CDS CFSAN001992_05385 NC_020307.1 1035640 1036449 D cytolethal distending toxin subunit CdtB 1035640..1036449 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470836.1 CDS CFSAN001992_05390 NC_020307.1 1036522 1036899 D hypothetical protein 1036522..1036899 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470837.1 CDS CFSAN001992_05395 NC_020307.1 1037047 1037589 R COG3926 Putative secretion activating protein; hypothetical protein complement(1037047..1037589) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470838.1 CDS CFSAN001992_05400 NC_020307.1 1037773 1038501 R pertussis toxin-like subunit ArtA complement(1037773..1038501) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470839.1 CDS CFSAN001992_05405 NC_020307.1 1038518 1038931 R subtilase cytotoxin subunit B complement(1038518..1038931) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470840.1 CDS CFSAN001992_05410 NC_020307.1 1039975 1041099 R bacteriophage protein complement(1039975..1041099) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470841.1 CDS CFSAN001992_05415 NC_020307.1 1041546 1042796 R COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase complement(1041546..1042796) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470842.1 CDS CFSAN001992_05420 NC_020307.1 1042968 1043633 D COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; ribosomal large subunit pseudouridine synthase E 1042968..1043633 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470843.1 CDS CFSAN001992_05425 NC_020307.1 1043630 1043959 D COG4461 Uncharacterized protein conserved in bacteria, putative lipoprotein; putative lipoprotein lprI Flags: Precursor 1043630..1043959 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470844.1 CDS CFSAN001992_05430 NC_020307.1 1043971 1044432 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; putative phosphohydrolase 1043971..1044432 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470845.1 CDS mnmA NC_020307.1 1044486 1045592 D COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA 1044486..1045592 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470846.1 CDS CFSAN001992_05440 NC_020307.1 1045679 1046320 D COG2915 Uncharacterized protein involved in purine metabolism; lysogenization regulator 1045679..1046320 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470847.1 CDS CFSAN001992_05445 NC_020307.1 1046324 1047694 D COG0015 Adenylosuccinate lyase; adenylosuccinate lyase 1046324..1047694 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470848.1 CDS CFSAN001992_05450 NC_020307.1 1047821 1048492 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator PhoP 1047821..1048492 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470849.1 CDS CFSAN001992_05455 NC_020307.1 1048492 1049955 D COG0642 Signal transduction histidine kinase; sensor protein PhoQ 1048492..1049955 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470850.1 CDS CFSAN001992_05460 NC_020307.1 1050036 1051157 D COG2850 Uncharacterized conserved protein; cupin family protein 1050036..1051157 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470851.1 CDS CFSAN001992_05465 NC_020307.1 1051197 1051586 R COG0457 FOG: TPR repeat; hypothetical protein complement(1051197..1051586) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470852.1 CDS CFSAN001992_05470 NC_020307.1 1051590 1052819 R COG2195 Di- and tripeptidases; peptidase T complement(1051590..1052819) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470853.1 CDS potA NC_020307.1 1053070 1054206 D COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; putrescine/spermidine ABC transporter ATPase protein 1053070..1054206 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470854.1 CDS potB NC_020307.1 1054190 1055053 D COG1176 ABC-type spermidine/putrescine transport system, permease component I; spermidine/putrescine ABC transporter membrane protein 1054190..1055053 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470855.1 CDS sifA NC_020307.1 1055382 1056392 D secreted effector protein SifA 1055382..1056392 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470856.1 CDS potC NC_020307.1 1056708 1057487 D COG1177 ABC-type spermidine/putrescine transport system, permease component II; spermidine/putrescine ABC transporter membrane protein 1056708..1057487 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470857.1 CDS potD NC_020307.1 1057512 1058558 D COG0687 Spermidine/putrescine-binding periplasmic protein; spermidine/putrescine ABC transporter periplasmic substrate-binding protein 1057512..1058558 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470858.1 CDS CFSAN001992_05500 NC_020307.1 1058640 1059461 R COG0846 NAD-dependent protein deacetylases, SIR2 family; NAD-dependent deacetylase complement(1058640..1059461) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470859.1 CDS CFSAN001992_05505 NC_020307.1 1059480 1060391 R COG1940 Transcriptional regulator/sugar kinase; N-acetyl-D-glucosamine kinase complement(1059480..1060391) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470860.1 CDS CFSAN001992_05510 NC_020307.1 1060420 1061664 R COG4591 ABC-type transport system, involved in lipoprotein release, permease component; outer membrane-specific lipoprotein transporter subunit LolE complement(1060420..1061664) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470861.1 CDS lolD NC_020307.1 1061664 1062365 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; lipoprotein transporter ATP-binding subunit complement(1061664..1062365) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470862.1 CDS CFSAN001992_05520 NC_020307.1 1062358 1063557 R COG4591 ABC-type transport system, involved in lipoprotein release, permease component; outer membrane-specific lipoprotein transporter subunit LolC complement(1062358..1063557) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470863.1 CDS CFSAN001992_05525 NC_020307.1 1063895 1067341 D COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor 1063895..1067341 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470864.1 CDS CFSAN001992_05530 NC_020307.1 1067489 1068454 D COG1376 Uncharacterized protein conserved in bacteria; L,D-transpeptidase 1067489..1068454 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470865.1 CDS CFSAN001992_05535 NC_020307.1 1068551 1068808 R hypothetical protein complement(1068551..1068808) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470866.1 CDS CFSAN001992_05540 NC_020307.1 1069050 1069685 D COG1309 Transcriptional regulator; putative HTH-type transcriptional regulator yjgJ 1069050..1069685 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470867.1 CDS CFSAN001992_05545 NC_020307.1 1069759 1070298 R COG3134 Predicted outer membrane lipoprotein; hypothetical protein complement(1069759..1070298) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470868.1 CDS CFSAN001992_05550 NC_020307.1 1070378 1070464 D hypothetical protein 1070378..1070464 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470869.1 CDS CFSAN001992_05555 NC_020307.1 1070477 1071781 R COG1252 NADH dehydrogenase, FAD-containing subunit; NADH dehydrogenase complement(1070477..1071781) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470870.1 CDS CFSAN001992_05560 NC_020307.1 1072035 1072577 R COG3150 Predicted esterase; hypothetical protein complement(1072035..1072577) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470871.1 CDS CFSAN001992_05565 NC_020307.1 1072602 1073627 R COG1472 Beta-glucosidase-related glycosidases; beta-hexosaminidase complement(1072602..1073627) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470872.1 CDS thiK NC_020307.1 1073638 1074462 R COG0510 Predicted choline kinase involved in LPS biosynthesis; thiamine kinase complement(1073638..1074462) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470873.1 CDS CFSAN001992_05575 NC_020307.1 1074443 1075081 R COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family); Lipoprotein YcfM complement(1074443..1075081) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470874.1 CDS CFSAN001992_05580 NC_020307.1 1075095 1075469 R COG5633 Predicted periplasmic lipoprotein; lipoprotein complement(1075095..1075469) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470875.1 CDS CFSAN001992_05585 NC_020307.1 1075472 1075831 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; purine nucleoside phosphoramidase complement(1075472..1075831) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470876.1 CDS CFSAN001992_05590 NC_020307.1 1076173 1078347 D COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; ferric-rhodotorulic acid outer membrane transporter 1076173..1078347 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470877.1 CDS CFSAN001992_05595 NC_020307.1 1078432 1079865 R COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; PTS glucose-specific subunit IIBC complement(1078432..1079865) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470878.1 CDS CFSAN001992_05600 NC_020307.1 1080160 1080957 R COG0084 Mg-dependent DNase; DNAse complement(1080160..1080957) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470879.1 CDS CFSAN001992_05605 NC_020307.1 1080968 1081972 R COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' complement(1080968..1081972) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470880.1 CDS tmk NC_020307.1 1081969 1082610 R COG0125 Thymidylate kinase; thymidylate kinase complement(1081969..1082610) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470881.1 CDS CFSAN001992_05615 NC_020307.1 1082600 1083622 R COG1559 Predicted periplasmic solute-binding protein; aminodeoxychorismate lyase complement(1082600..1083622) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470882.1 CDS CFSAN001992_05620 NC_020307.1 1083625 1084434 R COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; 4-amino-4-deoxychorismate lyase complement(1083625..1084434) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470883.1 CDS CFSAN001992_05625 NC_020307.1 1084849 1085391 D COG3539 P pilus assembly protein, pilin FimA; fimbrial protein 1084849..1085391 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470884.1 CDS CFSAN001992_05630 NC_020307.1 1085467 1086144 D COG3121 P pilus assembly protein, chaperone PapD; chaperone protein FimC 1085467..1086144 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470885.1 CDS CFSAN001992_05635 NC_020307.1 1086168 1088723 D COG3188 P pilus assembly protein, porin PapC; outer membrane usher protein SfmD 1086168..1088723 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470886.1 CDS CFSAN001992_05640 NC_020307.1 1089085 1089759 D COG3539 P pilus assembly protein, pilin FimA; fimbrial protein 1089085..1089759 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470887.1 CDS CFSAN001992_05645 NC_020307.1 1089799 1090293 D COG3539 P pilus assembly protein, pilin FimA; S-fimbrial adhesin protein SfaS 1089799..1090293 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470888.1 CDS CFSAN001992_05650 NC_020307.1 1090308 1090832 D COG3539 P pilus assembly protein, pilin FimA; fimbrial protein 1090308..1090832 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470889.1 CDS CFSAN001992_05655 NC_020307.1 1090903 1092144 R COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II complement(1090903..1092144) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470890.1 CDS CFSAN001992_05660 NC_020307.1 1092230 1092466 R COG0236 Acyl carrier protein; hypothetical protein complement(1092230..1092466) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470891.1 CDS fabG NC_020307.1 1092622 1093356 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-(acyl-carrier-protein) reductase complement(1092622..1093356) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470892.1 CDS CFSAN001992_05670 NC_020307.1 1093369 1094298 R COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase complement(1093369..1094298) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470893.1 CDS CFSAN001992_05675 NC_020307.1 1094314 1095267 R COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-(acyl carrier protein) synthase III complement(1094314..1095267) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470894.1 CDS CFSAN001992_05680 NC_020307.1 1095347 1096426 R COG0416 Fatty acid/phospholipid biosynthesis enzyme; phosphate acyltransferase complement(1095347..1096426) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470895.1 CDS CFSAN001992_05685 NC_020307.1 1096560 1096733 R COG0333 Ribosomal protein L32; 50S ribosomal protein L32 complement(1096560..1096733) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470896.1 CDS CFSAN001992_05690 NC_020307.1 1096785 1097306 R COG1399 Predicted metal-binding, possibly nucleic acid-binding protein; hypothetical protein complement(1096785..1097306) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470897.1 CDS CFSAN001992_05695 NC_020307.1 1097504 1098088 D COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 1097504..1098088 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470898.1 CDS CFSAN001992_05700 NC_020307.1 1098160 1098384 R hypothetical protein complement(1098160..1098384) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470899.1 CDS CFSAN001992_05705 NC_020307.1 1098587 1099348 R inner membrane lipoprotein complement(1098587..1099348) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470900.1 CDS CFSAN001992_05710 NC_020307.1 1099486 1100445 R COG0564 Pseudouridylate synthases, 23S RNA-specific; 23S rRNA pseudouridylate synthase C complement(1099486..1100445) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470901.1 CDS rne NC_020307.1 1101019 1104222 D COG1530 Ribonucleases G and E; ribonuclease E 1101019..1104222 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470902.1 CDS flgL NC_020307.1 1104466 1105419 R COG1344 Flagellin and related hook-associated proteins; flagellar hook-associated protein FlgL complement(1104466..1105419) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470903.1 CDS flgK NC_020307.1 1105434 1107095 R COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK complement(1105434..1107095) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470904.1 CDS flgJ NC_020307.1 1107160 1108110 R COG3951 Rod binding protein; flagellar rod assembly protein/muramidase FlgJ complement(1107160..1108110) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470905.1 CDS flgI NC_020307.1 1108110 1109207 R COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein complement(1108110..1109207) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470906.1 CDS flgH NC_020307.1 1109219 1109917 R COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein complement(1109219..1109917) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470907.1 CDS flgG NC_020307.1 1109971 1110753 R COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG complement(1109971..1110753) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470908.1 CDS flgF NC_020307.1 1110767 1111522 R COG4787 Flagellar basal body rod protein; flagellar basal body rod protein FlgF complement(1110767..1111522) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470909.1 CDS flgE NC_020307.1 1111543 1112754 R COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE complement(1111543..1112754) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470910.1 CDS flgD NC_020307.1 1112781 1113479 R COG1843 Flagellar hook capping protein; flagellar basal body rod modification protein complement(1112781..1113479) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470911.1 CDS flgC NC_020307.1 1113491 1113895 R COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC complement(1113491..1113895) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470912.1 CDS flgB NC_020307.1 1113899 1114315 R COG1815 Flagellar basal body protein; flagellar basal body rod protein FlgB complement(1113899..1114315) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470913.1 CDS flgA NC_020307.1 1114472 1115131 D COG1261 Flagellar basal body P-ring biosynthesis protein; flagellar basal body P-ring biosynthesis protein FlgA 1114472..1115131 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470914.1 CDS CFSAN001992_05780 NC_020307.1 1115223 1115516 D COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor); anti-sigma28 factor FlgM 1115223..1115516 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470915.1 CDS CFSAN001992_05785 NC_020307.1 1115521 1115943 D flagella synthesis chaperone protein FlgN 1115521..1115943 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470916.1 CDS CFSAN001992_05790 NC_020307.1 1116025 1117560 R COG0728 Uncharacterized membrane protein, putative virulence factor; integral membrane protein MviN complement(1116025..1117560) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470917.1 CDS CFSAN001992_05795 NC_020307.1 1117864 1118787 R COG0673 Predicted dehydrogenases and related proteins; virulence factor MviM complement(1117864..1118787) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470918.1 CDS CFSAN001992_05800 NC_020307.1 1118789 1119436 R COG3132 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1118789..1119436) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470919.1 CDS CFSAN001992_05805 NC_020307.1 1119472 1120056 R COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; ribosomal-protein-S5-alanine N-acetyltransferase complement(1119472..1120056) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470920.1 CDS CFSAN001992_05810 NC_020307.1 1120293 1121501 D COG0477 Permeases of the major facilitator superfamily; multidrug resistance protein MdtH 1120293..1121501 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470921.1 CDS CFSAN001992_05815 NC_020307.1 1121565 1122212 D COG2999 Glutaredoxin 2; glutaredoxin 2 1121565..1122212 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470922.1 CDS CFSAN001992_05820 NC_020307.1 1122337 1122897 D lipoprotein 1122337..1122897 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470923.1 CDS CFSAN001992_05825 NC_020307.1 1123001 1124047 D COG0418 Dihydroorotase; dihydroorotase 1123001..1124047 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470924.1 CDS CFSAN001992_05830 NC_020307.1 1124121 1124366 D DNA damage-inducible protein I 1124121..1124366 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470925.1 CDS bssS NC_020307.1 1124656 1124910 D biofilm formation regulatory protein BssS 1124656..1124910 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470926.1 CDS solA NC_020307.1 1125023 1126141 D COG0665 Glycine/D-amino acid oxidases (deaminating); N-methyltryptophan oxidase 1125023..1126141 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470927.1 CDS CFSAN001992_05845 NC_020307.1 1126182 1126295 D hypothetical protein 1126182..1126295 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470928.1 CDS CFSAN001992_05850 NC_020307.1 1126558 1127130 D COG3038 Cytochrome B561; cytochrome b561-like protein 2 1126558..1127130 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470929.1 CDS CFSAN001992_05855 NC_020307.1 1127127 1127702 D COG2353 Uncharacterized conserved protein; hypothetical protein 1127127..1127702 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470930.1 CDS CFSAN001992_05860 NC_020307.1 1127754 1128806 R COG1054 Predicted sulfurtransferase; rhodanese-related sulfurtransferase complement(1127754..1128806) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470931.1 CDS CFSAN001992_05865 NC_020307.1 1129026 1129946 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 1129026..1129946 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470932.1 CDS CFSAN001992_05870 NC_020307.1 1130101 1131315 D COG0477 Permeases of the major facilitator superfamily; drug efflux system protein MdtG 1130101..1131315 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470933.1 CDS CFSAN001992_05875 NC_020307.1 1131397 1131771 D secY/secA suppressor protein 1131397..1131771 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470934.1 CDS CFSAN001992_05880 NC_020307.1 1131772 1131999 R COG5645 Predicted periplasmic lipoprotein; lipoprotein complement(1131772..1131999) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470935.1 CDS CFSAN001992_05885 NC_020307.1 1132073 1134616 R COG2943 Membrane glycosyltransferase; glucosyltransferase MdoH complement(1132073..1134616) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470936.1 CDS mdoG NC_020307.1 1134609 1136144 R COG3131 Periplasmic glucans biosynthesis protein; glucan biosynthesis protein G complement(1134609..1136144) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470937.1 CDS CFSAN001992_05905 NC_020307.1 1137586 1139073 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; putative phospholipase complement(1137586..1139073) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470938.1 CDS CFSAN001992_05910 NC_020307.1 1139009 1139548 R COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; RNase III inhibitor complement(1139009..1139548) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470939.1 CDS CFSAN001992_05915 NC_020307.1 1139635 1139955 R hypothetical protein complement(1139635..1139955) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470940.1 CDS csgC NC_020307.1 1140086 1140511 R curli assembly protein CsgC complement(1140086..1140511) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470941.1 CDS csgA NC_020307.1 1140474 1140929 R COG1012 NAD-dependent aldehyde dehydrogenases; major curlin subunit complement(1140474..1140929) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470942.1 CDS csgB NC_020307.1 1140971 1141426 R curlin minor subunit CsgB complement(1140971..1141426) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470943.1 CDS CFSAN001992_05935 NC_020307.1 1142180 1142830 D COG2771 DNA-binding HTH domain-containing proteins; DNA-binding transcriptional regulator CsgD 1142180..1142830 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470944.1 CDS CFSAN001992_05940 NC_020307.1 1142835 1143230 D COG4670 Acyl CoA:acetate/3-ketoacid CoA transferase; curli assembly protein CsgE 1142835..1143230 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470945.1 CDS CFSAN001992_05945 NC_020307.1 1143257 1143673 D curli assembly protein CsgF 1143257..1143673 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470946.1 CDS CFSAN001992_05950 NC_020307.1 1143700 1144533 D COG1462 Uncharacterized protein involved in formation of curli polymers; curli production assembly/transport protein CsgG 1143700..1144533 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470947.1 CDS CFSAN001992_05955 NC_020307.1 1144572 1145054 R hypothetical protein complement(1144572..1145054) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470948.1 CDS CFSAN001992_05960 NC_020307.1 1145155 1145709 R COG3381 Uncharacterized component of anaerobic dehydrogenases; hypothetical protein complement(1145155..1145709) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470949.1 CDS CFSAN001992_05965 NC_020307.1 1145733 1146470 R COG1387 Histidinol phosphatase and related hydrolases of the PHP family; hydrolase complement(1145733..1146470) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470950.1 CDS ghrA NC_020307.1 1146555 1147493 R COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; bifunctional glyoxylate/hydroxypyruvate reductase A complement(1146555..1147493) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470951.1 CDS CFSAN001992_05975 NC_020307.1 1147492 1147656 D hypothetical protein 1147492..1147656 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470952.1 CDS CFSAN001992_05980 NC_020307.1 1148702 1149805 R COG0673 Predicted dehydrogenases and related proteins; oxidoreductase YjhC complement(1148702..1149805) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470953.1 CDS CFSAN001992_05985 NC_020307.1 1149819 1151099 R COG0477 Permeases of the major facilitator superfamily; sialic acid transporter complement(1149819..1151099) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470954.1 CDS CFSAN001992_05990 NC_020307.1 1151381 1152073 R oligogalacturonate-specific porin complement(1151381..1152073) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470955.1 CDS CFSAN001992_05995 NC_020307.1 1152119 1153279 R COG3055 Uncharacterized protein conserved in bacteria; N-acetylneuraminic acid mutarotase complement(1152119..1153279) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470956.1 CDS CFSAN001992_06000 NC_020307.1 1153785 1154465 D COG3010 Putative N-acetylmannosamine-6-phosphate epimerase; N-acetylmannosamine-6-phosphate 2-epimerase 1153785..1154465 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470957.1 CDS CFSAN001992_06005 NC_020307.1 1154802 1156298 D COG0591 Na+/proline symporter; sodium-glucose/galactose cotransporter 1154802..1156298 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470958.1 CDS CFSAN001992_06010 NC_020307.1 1156583 1157464 D COG1737 Transcriptional regulators; transcriptional regulator 1156583..1157464 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470959.1 CDS CFSAN001992_06015 NC_020307.1 1157570 1158358 R COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase; hypothetical protein complement(1157570..1158358) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470960.1 CDS CFSAN001992_06020 NC_020307.1 1158337 1158633 R hypothetical protein complement(1158337..1158633) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470961.1 CDS CFSAN001992_06025 NC_020307.1 1159251 1160759 R COG0591 Na+/proline symporter; proline:sodium symporter PutP complement(1159251..1160759) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470962.1 CDS putA NC_020307.1 1161181 1165143 D COG0506 Proline dehydrogenase; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1161181..1165143 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470963.1 CDS CFSAN001992_06035 NC_020307.1 1165202 1165597 D COG3755 Uncharacterized protein conserved in bacteria; hypothetical protein 1165202..1165597 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470964.1 CDS CFSAN001992_06040 NC_020307.1 1165594 1166232 R COG1309 Transcriptional regulator; HTH-type transcriptional regulator RutR complement(1165594..1166232) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470965.1 CDS CFSAN001992_06045 NC_020307.1 1166369 1166536 R COG3729 General stress protein; hypothetical protein complement(1166369..1166536) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470966.1 CDS CFSAN001992_06050 NC_020307.1 1166921 1167517 D COG0655 Multimeric flavodoxin WrbA; NAD(P)H:quinone oxidoreductase 1166921..1167517 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470967.1 CDS CFSAN001992_06055 NC_020307.1 1167538 1167765 D hypothetical protein 1167538..1167765 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470968.1 CDS CFSAN001992_06060 NC_020307.1 1167799 1169040 R glucose-1-phosphatase/inositol phosphatase complement(1167799..1169040) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470969.1 CDS CFSAN001992_06065 NC_020307.1 1169173 1169679 R COG0526 Thiol-disulfide isomerase and thioredoxins; suppressor for copper-sensitivity D complement(1169173..1169679) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470970.1 CDS CFSAN001992_06070 NC_020307.1 1169669 1170292 R COG1651 Protein-disulfide isomerase; Na(+)/H(+) antiporter nhaA 3 Sodium/proton antiporter nhaA 3 complement(1169669..1170292) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470971.1 CDS CFSAN001992_06075 NC_020307.1 1170289 1172175 R COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis; membrane protein, suppressor for copper-sensitivity B complement(1170289..1172175) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470972.1 CDS CFSAN001992_06080 NC_020307.1 1172224 1172586 R membrane protein, suppressor for copper-sensitivity A complement(1172224..1172586) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470973.1 CDS CFSAN001992_06085 NC_020307.1 1172822 1173742 D COG2214 DnaJ-class molecular chaperone; curved DNA-binding protein CbpA 1172822..1173742 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470974.1 CDS CFSAN001992_06090 NC_020307.1 1173742 1174047 D chaperone-modulator protein CbpM 1173742..1174047 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470975.1 CDS CFSAN001992_06095 NC_020307.1 1174701 1175063 D anti-adapter protein IraM 1174701..1175063 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470976.1 CDS CFSAN001992_06100 NC_020307.1 1175471 1176409 R COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III; hypothetical protein complement(1175471..1176409) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470977.1 CDS CFSAN001992_06105 NC_020307.1 1176423 1177319 R COG2207 AraC-type DNA-binding domain-containing proteins; HTH-type transcriptional activator rhaR L-rhamnose operon transcriptional activator rhaR complement(1176423..1177319) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470978.1 CDS CFSAN001992_06110 NC_020307.1 1177329 1178705 R COG0477 Permeases of the major facilitator superfamily; 4-hydroxyphenylacetate permease complement(1177329..1178705) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470979.1 CDS CFSAN001992_06115 NC_020307.1 1178778 1179569 R COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase complement(1178778..1179569) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470980.1 CDS CFSAN001992_06120 NC_020307.1 1179580 1180383 R COG3971 2-keto-4-pentenoate hydratase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase complement(1179580..1180383) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470981.1 CDS CFSAN001992_06125 NC_020307.1 1180528 1180908 R COG3232 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(1180528..1180908) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470982.1 CDS CFSAN001992_06130 NC_020307.1 1180918 1181769 R COG3384 Uncharacterized conserved protein; 3,4-dihydroxyphenylacetate 2,3-dioxygenase complement(1180918..1181769) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470983.1 CDS CFSAN001992_06135 NC_020307.1 1181771 1183237 R COG1012 NAD-dependent aldehyde dehydrogenases; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase complement(1181771..1183237) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470984.1 CDS CFSAN001992_06140 NC_020307.1 1183234 1184523 R COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway); 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase complement(1183234..1184523) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470985.1 CDS CFSAN001992_06145 NC_020307.1 1184798 1185238 D COG1846 Transcriptional regulators; Homoprotocatechuate degradative operon repressor 1184798..1185238 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470986.1 CDS CFSAN001992_06150 NC_020307.1 1185456 1187018 D COG2368 Aromatic ring hydroxylase; 4-hydroxyphenylacetate 3-monooxygenase 1185456..1187018 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470987.1 CDS hpaC NC_020307.1 1187036 1187548 D COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; 4-hydroxyphenylacetate 3-monooxygenase reductase subunit 1187036..1187548 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470988.1 CDS CFSAN001992_06160 NC_020307.1 1187881 1188291 R COG2351 Transthyretin-like protein; hydroxyisourate hydrolase complement(1187881..1188291) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470989.1 CDS CFSAN001992_06165 NC_020307.1 1188427 1189023 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulatory protein YedW 1188427..1189023 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470990.1 CDS CFSAN001992_06170 NC_020307.1 1189099 1190463 D COG0642 Signal transduction histidine kinase; heavy metal sensor kinase family protein 1189099..1190463 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470991.1 CDS CFSAN001992_06175 NC_020307.1 1190636 1192105 D COG4690 Dipeptidase; secreted peptidase 1190636..1192105 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470992.1 CDS CFSAN001992_06180 NC_020307.1 1192325 1192495 R hypothetical protein complement(1192325..1192495) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470993.1 CDS CFSAN001992_06185 NC_020307.1 1192827 1194512 D inositol phosphate phosphatase SopB 1192827..1194512 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470994.1 CDS CFSAN001992_06190 NC_020307.1 1194529 1194870 D type III secretion chaperone protein SigE 1194529..1194870 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470995.1 CDS CFSAN001992_06195 NC_020307.1 1194880 1195008 R inner membrane protein complement(1194880..1195008) Salmonella enterica subsp. enterica serovar Javiana str. YP_007470996.1 CDS CFSAN001992_06200 NC_020307.1 1196033 1196908 D COG1357 Uncharacterized low-complexity proteins; secreted effector protein PipB 1196033..1196908 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470997.1 CDS CFSAN001992_06205 NC_020307.1 1197058 1197579 D hypothetical protein 1197058..1197579 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470998.1 CDS CFSAN001992_06210 NC_020307.1 1197964 1198230 D hypothetical protein 1197964..1198230 Salmonella enterica subsp. enterica serovar Javiana str. YP_007470999.1 CDS CFSAN001992_06215 NC_020307.1 1198246 1198497 R hypothetical protein complement(1198246..1198497) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471000.1 CDS CFSAN001992_06220 NC_020307.1 1198546 1199268 R COG0448 ADP-glucose pyrophosphorylase; hypothetical protein complement(1198546..1199268) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471001.1 CDS CFSAN001992_06225 NC_020307.1 1199336 1199929 R hypothetical protein complement(1199336..1199929) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471002.1 CDS CFSAN001992_06230 NC_020307.1 1199919 1200743 R COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; phage tail assembly-like protein complement(1199919..1200743) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471003.1 CDS CFSAN001992_06235 NC_020307.1 1200740 1202449 R chimeric prophage tail protein complement(1200740..1202449) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471004.1 CDS CFSAN001992_06240 NC_020307.1 1202446 1203072 R hypothetical protein complement(1202446..1203072) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471005.1 CDS CFSAN001992_06245 NC_020307.1 1203056 1204282 R hypothetical protein complement(1203056..1204282) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471006.1 CDS CFSAN001992_06250 NC_020307.1 1204279 1204611 R hypothetical protein complement(1204279..1204611) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471007.1 CDS CFSAN001992_06255 NC_020307.1 1204608 1205324 R hypothetical protein complement(1204608..1205324) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471008.1 CDS CFSAN001992_06260 NC_020307.1 1205321 1206373 R hypothetical protein complement(1205321..1206373) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471009.1 CDS CFSAN001992_06265 NC_020307.1 1206373 1206648 R hypothetical protein complement(1206373..1206648) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471010.1 CDS CFSAN001992_06270 NC_020307.1 1206645 1207361 R hypothetical protein complement(1206645..1207361) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471011.1 CDS CFSAN001992_06275 NC_020307.1 1207361 1209352 R COG1358 Ribosomal protein HS6-type (S12/L30/L7a); hypothetical protein complement(1207361..1209352) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471012.1 CDS CFSAN001992_06280 NC_020307.1 1209336 1209467 D hypothetical protein 1209336..1209467 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471013.1 CDS CFSAN001992_06285 NC_020307.1 1209476 1210063 R hypothetical protein complement(1209476..1210063) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471014.1 CDS CFSAN001992_06290 NC_020307.1 1210063 1210449 R hypothetical protein complement(1210063..1210449) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471015.1 CDS CFSAN001992_06295 NC_020307.1 1210504 1211898 R hypothetical protein complement(1210504..1211898) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471016.1 CDS CFSAN001992_06300 NC_020307.1 1211904 1212842 R hypothetical protein complement(1211904..1212842) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471017.1 CDS CFSAN001992_06305 NC_020307.1 1212826 1213257 R COG0055 F0F1-type ATP synthase, beta subunit; hypothetical protein complement(1212826..1213257) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471018.1 CDS CFSAN001992_06310 NC_020307.1 1213254 1213679 R hypothetical protein complement(1213254..1213679) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471019.1 CDS CFSAN001992_06315 NC_020307.1 1213692 1214177 R hypothetical protein complement(1213692..1214177) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471020.1 CDS CFSAN001992_06320 NC_020307.1 1214244 1215275 R hypothetical protein complement(1214244..1215275) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471021.1 CDS CFSAN001992_06325 NC_020307.1 1215293 1216138 R hypothetical protein complement(1215293..1216138) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471022.1 CDS CFSAN001992_06330 NC_020307.1 1216186 1217760 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; nudix hydrolase complement(1216186..1217760) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471023.1 CDS CFSAN001992_06335 NC_020307.1 1217761 1218636 R hypothetical protein complement(1217761..1218636) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471024.1 CDS CFSAN001992_06340 NC_020307.1 1218608 1220038 R hypothetical protein complement(1218608..1220038) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471025.1 CDS CFSAN001992_06345 NC_020307.1 1220038 1221309 R hypothetical protein complement(1220038..1221309) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471026.1 CDS CFSAN001992_06350 NC_020307.1 1221299 1222273 R COG3728 Phage terminase, small subunit; hypothetical protein complement(1221299..1222273) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471027.1 CDS CFSAN001992_06355 NC_020307.1 1222359 1222628 R hypothetical protein complement(1222359..1222628) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471028.1 CDS CFSAN001992_06360 NC_020307.1 1222699 1223238 R hypothetical protein complement(1222699..1223238) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471029.1 CDS CFSAN001992_06365 NC_020307.1 1223235 1223849 R COG3179 Predicted chitinase; Endochitinase A CHN-A , Flags: Precursor complement(1223235..1223849) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471030.1 CDS CFSAN001992_06370 NC_020307.1 1223852 1224199 R phage holin, lambda family protein complement(1223852..1224199) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471031.1 CDS CFSAN001992_06375 NC_020307.1 1224469 1225155 D hypothetical protein 1224469..1225155 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471032.1 CDS CFSAN001992_06390 NC_020307.1 1225819 1226112 R hypothetical protein complement(1225819..1226112) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471033.1 CDS CFSAN001992_06395 NC_020307.1 1226109 1226705 R gifsy-2 prophage protein complement(1226109..1226705) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471034.1 CDS CFSAN001992_06400 NC_020307.1 1226774 1226965 R hypothetical protein complement(1226774..1226965) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471035.1 CDS CFSAN001992_06405 NC_020307.1 1227149 1227487 R hypothetical protein complement(1227149..1227487) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471036.1 CDS CFSAN001992_06410 NC_020307.1 1227487 1227657 R methyltransferase complement(1227487..1227657) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471037.1 CDS CFSAN001992_06415 NC_020307.1 1227654 1228256 R COG4725 Transcriptional activator, adenine-specific DNA methyltransferase; adenine methylase complement(1227654..1228256) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471038.1 CDS CFSAN001992_06420 NC_020307.1 1228249 1228497 R hypothetical protein complement(1228249..1228497) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471039.1 CDS CFSAN001992_06425 NC_020307.1 1228501 1229181 R hypothetical protein complement(1228501..1229181) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471040.1 CDS CFSAN001992_06430 NC_020307.1 1229219 1230607 R COG0305 Replicative DNA helicase; replicative DNA helicase complement(1229219..1230607) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471041.1 CDS CFSAN001992_06435 NC_020307.1 1230604 1231572 R hypothetical protein complement(1230604..1231572) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471042.1 CDS CFSAN001992_06440 NC_020307.1 1231659 1231883 R hypothetical protein complement(1231659..1231883) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471043.1 CDS CFSAN001992_06445 NC_020307.1 1231906 1232481 R hypothetical protein complement(1231906..1232481) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471044.1 CDS CFSAN001992_06450 NC_020307.1 1232417 1232650 R putative phage regulatory protein complement(1232417..1232650) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471045.1 CDS CFSAN001992_06455 NC_020307.1 1232749 1233213 D hypothetical protein 1232749..1233213 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471046.1 CDS CFSAN001992_06460 NC_020307.1 1233899 1234222 D hypothetical protein 1233899..1234222 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471047.1 CDS CFSAN001992_06465 NC_020307.1 1234230 1234475 D hypothetical protein 1234230..1234475 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471048.1 CDS CFSAN001992_06470 NC_020307.1 1234505 1236778 D hypothetical protein 1234505..1236778 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471049.1 CDS CFSAN001992_06475 NC_020307.1 1236775 1237329 D hypothetical protein 1236775..1237329 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471050.1 CDS CFSAN001992_06480 NC_020307.1 1237332 1237514 D hypothetical protein 1237332..1237514 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471051.1 CDS CFSAN001992_06485 NC_020307.1 1237727 1237951 D phage-like protein 1237727..1237951 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471052.1 CDS CFSAN001992_06490 NC_020307.1 1237952 1238974 D COG0582 Integrase; site-specific recombinase, phage integrase family protein 1237952..1238974 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471053.1 CDS CFSAN001992_06495 NC_020307.1 1238967 1240253 R hypothetical protein complement(1238967..1240253) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471054.1 CDS CFSAN001992_06500 NC_020307.1 1240257 1241342 R COG3081 Nucleoid-associated protein; hypothetical protein complement(1240257..1241342) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471055.1 CDS CFSAN001992_06505 NC_020307.1 1242039 1242698 D COG0670 Integral membrane protein, interacts with FtsH; HflBKC-binding inner membrane protein 1242039..1242698 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471056.1 CDS CFSAN001992_06510 NC_020307.1 1242785 1243114 D COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit; sulfur transfer protein TusE 1242785..1243114 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471057.1 CDS CFSAN001992_06515 NC_020307.1 1243111 1243392 R COG1254 Acylphosphatases; acylphosphatase complement(1243111..1243392) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471058.1 CDS CFSAN001992_06520 NC_020307.1 1243441 1244220 R COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional regulator complement(1243441..1244220) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471059.1 CDS CFSAN001992_06525 NC_020307.1 1244246 1244794 R COG1881 Phospholipid-binding protein; hypothetical protein complement(1244246..1244794) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471060.1 CDS CFSAN001992_06530 NC_020307.1 1245009 1246220 D COG1092 Predicted SAM-dependent methyltransferases; 23S rRNA m(5)C1962 methyltransferase 1245009..1246220 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471061.1 CDS CFSAN001992_06535 NC_020307.1 1246278 1246595 D COG3785 Uncharacterized conserved protein; heat shock protein HspQ 1246278..1246595 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471062.1 CDS CFSAN001992_06540 NC_020307.1 1246640 1247053 R COG1832 Predicted CoA-binding protein; hypothetical protein complement(1246640..1247053) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471063.1 CDS CFSAN001992_06545 NC_020307.1 1247227 1247889 D COG3110 Uncharacterized protein conserved in bacteria; hypothetical protein 1247227..1247889 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471064.1 CDS mgsA NC_020307.1 1247984 1248442 D COG1803 Methylglyoxal synthase; methylglyoxal synthase 1247984..1248442 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471065.1 CDS helD NC_020307.1 1248478 1250532 R COG0210 Superfamily I DNA and RNA helicases; DNA helicase IV complement(1248478..1250532) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471066.1 CDS CFSAN001992_06560 NC_020307.1 1250656 1251102 D COG3304 Predicted membrane protein; hypothetical protein 1250656..1251102 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471067.1 CDS CFSAN001992_06565 NC_020307.1 1251121 1253274 D COG1289 Predicted membrane protein; Inner membrane protein yccS 1251121..1253274 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471068.1 CDS CFSAN001992_06570 NC_020307.1 1253261 1253866 R COG3070 Regulator of competence-specific genes; Protein sxy complement(1253261..1253866) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471069.1 CDS CFSAN001992_06575 NC_020307.1 1254082 1254591 D COG5404 SOS-response cell division inhibitor, blocks FtsZ ring formation; SOS cell division inhibitor 1254082..1254591 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471070.1 CDS CFSAN001992_06580 NC_020307.1 1254948 1256000 D COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; outer membrane protein A 1254948..1256000 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471071.1 CDS CFSAN001992_06585 NC_020307.1 1256072 1256524 R COG3120 Uncharacterized protein conserved in bacteria; Ter macrodomain organizer matS-binding protein complement(1256072..1256524) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471072.1 CDS CFSAN001992_06590 NC_020307.1 1256710 1258470 D COG1067 Predicted ATP-dependent protease; ATP-dependent protease La 1256710..1258470 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471073.1 CDS CFSAN001992_06595 NC_020307.1 1258539 1259057 D COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1258539..1259057 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471074.1 CDS CFSAN001992_06600 NC_020307.1 1259157 1259324 R COG3130 Ribosome modulation factor; ribosome modulation factor complement(1259157..1259324) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471075.1 CDS CFSAN001992_06605 NC_020307.1 1259580 1260143 R COG3009 Uncharacterized protein conserved in bacteria; lipoprotein complement(1259580..1260143) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471076.1 CDS CFSAN001992_06610 NC_020307.1 1260140 1261780 R COG3008 Paraquat-inducible protein B; paraquat-inducible protein B complement(1260140..1261780) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471077.1 CDS CFSAN001992_06615 NC_020307.1 1261785 1263038 R COG2995 Uncharacterized paraquat-inducible protein A; paraquat-inducible membrane protein A complement(1261785..1263038) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471078.1 CDS CFSAN001992_06620 NC_020307.1 1263053 1264960 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATPase component complement(1263053..1264960) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471079.1 CDS rlmL NC_020307.1 1264973 1267081 R COG0116 Predicted N6-adenine-specific DNA methylase; 23S rRNA m(2)G2445 methyltransferase complement(1264973..1267081) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471080.1 CDS CFSAN001992_06630 NC_020307.1 1267180 1268289 D COG3217 Uncharacterized Fe-S protein; MOSC domain-containing protein 1267180..1268289 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471081.1 CDS CFSAN001992_06635 NC_020307.1 1268286 1268828 R hypothetical protein complement(1268286..1268828) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471082.1 CDS CFSAN001992_06640 NC_020307.1 1268995 1270005 R COG0167 Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 2 complement(1268995..1270005) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471083.1 CDS pepN NC_020307.1 1270213 1272825 R COG0308 Aminopeptidase N; aminopeptidase N complement(1270213..1272825) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471084.1 CDS CFSAN001992_06650 NC_020307.1 1273092 1274294 D COG1488 Nicotinic acid phosphoribosyltransferase; nicotinate phosphoribosyltransferase 1273092..1274294 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471085.1 CDS asnC NC_020307.1 1274463 1275863 D COG0017 Aspartyl/asparaginyl-tRNA synthetases; asparaginyl-tRNA ligase 1274463..1275863 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471086.1 CDS CFSAN001992_06660 NC_020307.1 1276469 1277560 D COG3203 Outer membrane protein (porin); outer membrane protein F 1276469..1277560 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471087.1 CDS CFSAN001992_06665 NC_020307.1 1277745 1278935 D COG1448 Aspartate/tyrosine/aromatic aminotransferase; aromatic amino acid aminotransferase 1277745..1278935 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471088.1 CDS CFSAN001992_06670 NC_020307.1 1278997 1279644 R COG0491 Zn-dependent hydrolases, including glyoxylases; hydroxyacylglutathione hydrolase complement(1278997..1279644) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471089.1 CDS CFSAN001992_06675 NC_020307.1 1279672 1280220 R COG3108 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1279672..1280220) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471090.1 CDS CFSAN001992_06680 NC_020307.1 1280480 1282327 R COG2989 Uncharacterized protein conserved in bacteria; murein L,D-transpeptidase complement(1280480..1282327) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471091.1 CDS mukB NC_020307.1 1282672 1287138 R COG3096 Uncharacterized protein involved in chromosome partitioning; cell division protein MukB complement(1282672..1287138) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471092.1 CDS CFSAN001992_06690 NC_020307.1 1287138 1287842 R COG3095 Uncharacterized protein involved in chromosome partitioning; condesin subunit E complement(1287138..1287842) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471093.1 CDS CFSAN001992_06695 NC_020307.1 1287823 1289145 R COG3006 Uncharacterized protein involved in chromosome partitioning; condesin subunit F complement(1287823..1289145) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471094.1 CDS CFSAN001992_06700 NC_020307.1 1289138 1289941 R COG0500 SAM-dependent methyltransferases; S-adenosyl-L-methionine-dependent methyltransferase complement(1289138..1289941) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471095.1 CDS CFSAN001992_06705 NC_020307.1 1290077 1290853 D COG1434 Uncharacterized conserved protein; hypothetical protein 1290077..1290853 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471096.1 CDS CFSAN001992_06710 NC_020307.1 1290833 1291726 R hypothetical protein complement(1290833..1291726) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471097.1 CDS CFSAN001992_06715 NC_020307.1 1291937 1292683 R COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(1291937..1292683) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471098.1 CDS CFSAN001992_06720 NC_020307.1 1292680 1292862 R COG2835 Uncharacterized conserved protein; hypothetical protein complement(1292680..1292862) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471099.1 CDS CFSAN001992_06725 NC_020307.1 1292914 1294146 R COG3214 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1292914..1294146) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471100.1 CDS lpxK NC_020307.1 1294190 1295167 R COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(1294190..1295167) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471101.1 CDS CFSAN001992_06735 NC_020307.1 1295164 1296912 R COG1132 ABC-type multidrug transport system, ATPase and permease components; lipid transporter ATP-binding/permease protein complement(1295164..1296912) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471102.1 CDS CFSAN001992_06740 NC_020307.1 1296949 1299153 R COG0658 Predicted membrane metal-binding protein; ComEC family competence protein complement(1296949..1299153) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471103.1 CDS ihfB NC_020307.1 1299383 1299667 R COG0776 Bacterial nucleoid DNA-binding protein; integration host factor subunit beta complement(1299383..1299667) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471104.1 CDS rpsA NC_020307.1 1299823 1301496 R COG0539 Ribosomal protein S1; 30S ribosomal protein S1 complement(1299823..1301496) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471105.1 CDS cmk NC_020307.1 1301610 1302293 R COG0283 Cytidylate kinase; cytidylate kinase complement(1301610..1302293) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471106.1 CDS CFSAN001992_06760 NC_020307.1 1302466 1303227 R COG0501 Zn-dependent protease with chaperone function; putative heat shock protein complement(1302466..1303227) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471107.1 CDS CFSAN001992_06765 NC_020307.1 1303370 1304653 R COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1303370..1304653) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471108.1 CDS CFSAN001992_06770 NC_020307.1 1304724 1305812 R COG1932 Phosphoserine aminotransferase; 3-phosphoserine/phosphohydroxythreonine aminotransferase complement(1304724..1305812) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471109.1 CDS CFSAN001992_06775 NC_020307.1 1305998 1306690 R COG2323 Predicted membrane protein; UPF0702 transmembrane protein ycaP complement(1305998..1306690) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471110.1 CDS CFSAN001992_06780 NC_020307.1 1306827 1308587 D COG1944 Uncharacterized conserved protein; hypothetical protein 1306827..1308587 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471111.1 CDS CFSAN001992_06785 NC_020307.1 1308992 1309849 D COG2116 Formate/nitrite family of transporters; formate transporter 1308992..1309849 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471112.1 CDS CFSAN001992_06790 NC_020307.1 1309909 1312191 D COG1882 Pyruvate-formate lyase; pyruvate formate-lyase 1309909..1312191 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471113.1 CDS CFSAN001992_06795 NC_020307.1 1312263 1313222 R pathogenicity island 1 protein SopD2 complement(1312263..1313222) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471114.1 CDS CFSAN001992_06800 NC_020307.1 1313512 1313679 D hypothetical protein 1313512..1313679 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471115.1 CDS pflA NC_020307.1 1313798 1314595 D COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase-activating enzyme 1 1313798..1314595 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471116.1 CDS CFSAN001992_06810 NC_020307.1 1314887 1316308 R COG0531 Amino acid transporters; Inner membrane transporter yjeM complement(1314887..1316308) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471117.1 CDS CFSAN001992_06815 NC_020307.1 1316526 1317674 R COG0477 Permeases of the major facilitator superfamily; MFS family transporter protein complement(1316526..1317674) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471118.1 CDS CFSAN001992_06820 NC_020307.1 1318024 1318887 R COG3302 DMSO reductase anchor subunit; Anaerobic dimethyl sulfoxide reductase chain C DMSO reductase anchor subunit complement(1318024..1318887) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471119.1 CDS CFSAN001992_06825 NC_020307.1 1318889 1319506 R COG0437 Fe-S-cluster-containing hydrogenase components 1; dimethylsulfoxide reductase subunit B complement(1318889..1319506) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471120.1 CDS CFSAN001992_06830 NC_020307.1 1319517 1321961 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; anaerobic dimethyl sulfoxide reductase subunit A complement(1319517..1321961) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471121.1 CDS CFSAN001992_06835 NC_020307.1 1322199 1323491 R COG0172 Seryl-tRNA synthetase; seryl-tRNA ligase complement(1322199..1323491) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471122.1 CDS CFSAN001992_06840 NC_020307.1 1323750 1325093 R COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; recombination factor protein RarA complement(1323750..1325093) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471123.1 CDS lolA NC_020307.1 1325103 1325714 R COG2834 Outer membrane lipoprotein-sorting protein; lipoprotein chaperone complement(1325103..1325714) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471124.1 CDS CFSAN001992_06850 NC_020307.1 1325857 1329951 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; DNA translocase FtsK complement(1325857..1329951) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471125.1 CDS CFSAN001992_06855 NC_020307.1 1330029 1330523 R COG1522 Transcriptional regulators; leucine-responsive transcriptional regulator complement(1330029..1330523) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471126.1 CDS CFSAN001992_06860 NC_020307.1 1331070 1332038 D COG0492 Thioredoxin reductase; thioredoxin reductase 1331070..1332038 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471127.1 CDS CFSAN001992_06865 NC_020307.1 1332154 1333920 D COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components; cysteine/glutathione ABC transporter membrane/ATP-binding component 1332154..1333920 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471128.1 CDS CFSAN001992_06870 NC_020307.1 1333921 1335642 D COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components; cysteine/glutathione ABC transporter membrane/ATP-binding component 1333921..1335642 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471129.1 CDS aat NC_020307.1 1335687 1336391 D COG2360 Leu/Phe-tRNA-protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 1335687..1336391 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471130.1 CDS CFSAN001992_06880 NC_020307.1 1336703 1336921 D COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 1336703..1336921 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471131.1 CDS CFSAN001992_06885 NC_020307.1 1337012 1337923 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(1337012..1337923) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471132.1 CDS CFSAN001992_06890 NC_020307.1 1338032 1338892 D COG1741 Pirin-related protein; Pirin-like protein 1338032..1338892 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471133.1 CDS CFSAN001992_06895 NC_020307.1 1338912 1339589 D COG1335 Amidases related to nicotinamidase; hypothetical protein 1338912..1339589 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471134.1 CDS clpA NC_020307.1 1340199 1342475 R COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent Clp protease ATP-binding subunit complement(1340199..1342475) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471135.1 CDS clpS NC_020307.1 1342506 1342826 R COG2127 Uncharacterized conserved protein; ATP-dependent Clp protease adaptor protein ClpS complement(1342506..1342826) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471136.1 CDS CFSAN001992_06910 NC_020307.1 1343150 1343371 D COG1278 Cold shock proteins; cold shock-like protein CspD 1343150..1343371 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471137.1 CDS CFSAN001992_06915 NC_020307.1 1343501 1345447 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; macrolide transporter ATP-binding /permease protein complement(1343501..1345447) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471138.1 CDS CFSAN001992_06920 NC_020307.1 1345444 1346562 R COG0845 Membrane-fusion protein; macrolide transporter subunit MacA complement(1345444..1346562) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471139.1 CDS CFSAN001992_06925 NC_020307.1 1346708 1347658 D COG2990 Uncharacterized protein conserved in bacteria; hypothetical protein 1346708..1347658 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471140.1 CDS CFSAN001992_06930 NC_020307.1 1347655 1349313 R COG3593 Predicted ATP-dependent endonuclease of the OLD family; ATP-dependent OLD family endonuclease complement(1347655..1349313) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471141.1 CDS CFSAN001992_06935 NC_020307.1 1349514 1350413 D COG2431 Predicted membrane protein; hypothetical protein 1349514..1350413 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471142.1 CDS CFSAN001992_06940 NC_020307.1 1350557 1352209 D COG1151 6Fe-6S prismane cluster-containing protein; hybrid cluster protein 1350557..1352209 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471143.1 CDS CFSAN001992_06945 NC_020307.1 1352221 1353189 D COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; HCP oxidoreductase, NADH-dependent 1352221..1353189 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471144.1 CDS CFSAN001992_06950 NC_020307.1 1353347 1355065 D COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; pyruvate dehydrogenase 1353347..1355065 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471145.1 CDS CFSAN001992_06955 NC_020307.1 1355104 1356105 D COG2008 Threonine aldolase; L-threonine aldolase 1355104..1356105 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471146.1 CDS CFSAN001992_06960 NC_020307.1 1356116 1357549 D COG0702 Predicted nucleoside-diphosphate-sugar epimerases; NAD dependent epimerase/dehydratase family protein 1356116..1357549 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471147.1 CDS CFSAN001992_06965 NC_020307.1 1357645 1358658 D COG0451 Nucleoside-diphosphate-sugar epimerases; NAD dependent epimerase/dehydratase family protein 1357645..1358658 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471148.1 CDS CFSAN001992_06970 NC_020307.1 1358655 1359485 R COG3023 Negative regulator of beta-lactamase expression; N-acetylmuramoyl-L-alanine amidase AmiD complement(1358655..1359485) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471149.1 CDS CFSAN001992_06975 NC_020307.1 1359482 1359805 R COG0393 Uncharacterized conserved protein; hypothetical protein complement(1359482..1359805) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471150.1 CDS CFSAN001992_06980 NC_020307.1 1359933 1360448 D lipoprotein 1359933..1360448 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471151.1 CDS artP NC_020307.1 1360677 1361405 D COG4161 ABC-type arginine transport system, ATPase component; arginine transporter ATP-binding subunit 1360677..1361405 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471152.1 CDS CFSAN001992_06990 NC_020307.1 1361423 1362154 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; ABC transporter arginine-biding protein 1361423..1362154 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471153.1 CDS CFSAN001992_06995 NC_020307.1 1362161 1362877 D COG4215 ABC-type arginine transport system, permease component; arginine transporter permease subunit ArtQ 1362161..1362877 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471154.1 CDS artM NC_020307.1 1362877 1363545 D COG4160 ABC-type arginine/histidine transport system, permease component; arginine transporter permease subunit ArtM 1362877..1363545 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471155.1 CDS CFSAN001992_07005 NC_020307.1 1363782 1364513 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; arginine ABC transporter periplasmic arginine-binding protein ArtJ 1363782..1364513 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471156.1 CDS CFSAN001992_07010 NC_020307.1 1364719 1366206 R COG3119 Arylsulfatase A and related enzymes; sulfatase complement(1364719..1366206) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471157.1 CDS CFSAN001992_07015 NC_020307.1 1366216 1366536 R COG3414 Phosphotransferase system, galactitol-specific IIB component; putative phosphotransferase enzyme II, B component complement(1366216..1366536) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471158.1 CDS CFSAN001992_07020 NC_020307.1 1366566 1367909 R COG3037 Uncharacterized protein conserved in bacteria; PTS system ascorbate-specific transporter subunit IIC complement(1366566..1367909) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471159.1 CDS rumB NC_020307.1 1368204 1369331 R COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; 23S rRNA methyluridine methyltransferase complement(1368204..1369331) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471160.1 CDS CFSAN001992_07030 NC_020307.1 1369374 1369847 R hypothetical protein complement(1369374..1369847) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471161.1 CDS CFSAN001992_07035 NC_020307.1 1369921 1370766 R COG1177 ABC-type spermidine/putrescine transport system, permease component II; putrescine transporter subunit: membrane component of ABC superfamily complement(1369921..1370766) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471162.1 CDS CFSAN001992_07040 NC_020307.1 1370763 1371716 R COG1176 ABC-type spermidine/putrescine transport system, permease component I; putrescine transporter subunit: membrane component of ABC superfamily complement(1370763..1371716) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471163.1 CDS potG NC_020307.1 1371726 1372859 R COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; putrescine transporter ATP-binding subunit complement(1371726..1372859) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471164.1 CDS CFSAN001992_07050 NC_020307.1 1372947 1374059 R COG0687 Spermidine/putrescine-binding periplasmic protein; putrescine transporter subunit: periplasmic-binding component of ABC superfamily complement(1372947..1374059) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471165.1 CDS CFSAN001992_07055 NC_020307.1 1374408 1374884 R hypothetical protein complement(1374408..1374884) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471166.1 CDS CFSAN001992_07060 NC_020307.1 1374980 1375882 R COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); ribosomal protein S6 modification protein complement(1374980..1375882) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471167.1 CDS CFSAN001992_07065 NC_020307.1 1375940 1376662 R COG0778 Nitroreductase; nitroreductase A complement(1375940..1376662) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471168.1 CDS CFSAN001992_07070 NC_020307.1 1376646 1376936 R hypothetical protein complement(1376646..1376936) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471169.1 CDS grxA NC_020307.1 1377106 1377369 D COG0695 Glutaredoxin and related proteins; glutaredoxin 1 1377106..1377369 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471170.1 CDS CFSAN001992_07080 NC_020307.1 1377401 1377778 R Inner membrane protein ybjM complement(1377401..1377778) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471171.1 CDS CFSAN001992_07085 NC_020307.1 1378049 1379734 D COG2985 Predicted permease; transporter 1378049..1379734 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471172.1 CDS CFSAN001992_07090 NC_020307.1 1379851 1380471 R COG3226 Uncharacterized protein conserved in bacteria; tetR family transcriptional regulator complement(1379851..1380471) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471173.1 CDS CFSAN001992_07095 NC_020307.1 1380639 1381850 D COG0477 Permeases of the major facilitator superfamily; hypothetical protein 1380639..1381850 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471174.1 CDS CFSAN001992_07100 NC_020307.1 1381847 1382662 D COG0561 Predicted hydrolases of the HAD superfamily; phosphatase YbjI 1381847..1382662 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471175.1 CDS CFSAN001992_07105 NC_020307.1 1382716 1383948 R COG0477 Permeases of the major facilitator superfamily; multidrug efflux system translocase MdfA complement(1382716..1383948) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471176.1 CDS CFSAN001992_07110 NC_020307.1 1384261 1384869 D COG0671 Membrane-associated phospholipid phosphatase; undecaprenyl pyrophosphate phosphatase 1384261..1384869 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471177.1 CDS CFSAN001992_07115 NC_020307.1 1384941 1385699 D COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional repressor DeoR 1384941..1385699 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471178.1 CDS CFSAN001992_07120 NC_020307.1 1385744 1386946 R COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase fraction C complement(1385744..1386946) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471179.1 CDS CFSAN001992_07125 NC_020307.1 1387190 1387816 D COG0625 Glutathione S-transferase; Glutathione S-transferase 1-1 GST class-theta 1387190..1387816 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471180.1 CDS CFSAN001992_07130 NC_020307.1 1387813 1388493 R COG3677 Transposase and inactivated derivatives; Soluble aldose sugar dehydrogenase yliI Asd , Flags: Precursor complement(1387813..1388493) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471181.1 CDS CFSAN001992_07135 NC_020307.1 1388840 1389265 D COG2610 H+/gluconate symporter and related permeases; citrate transporter family protein 1388840..1389265 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471182.1 CDS CFSAN001992_07140 NC_020307.1 1389530 1390420 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1389530..1390420 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471183.1 CDS CFSAN001992_07145 NC_020307.1 1390426 1392111 R COG0644 Dehydrogenases (flavoproteins); electron-transferring-flavoproteindehydrogenase complement(1390426..1392111) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471184.1 CDS CFSAN001992_07150 NC_020307.1 1392561 1393724 R COG1960 Acyl-CoA dehydrogenases; putative acyl-CoA dehydrogenase complement(1392561..1393724) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471185.1 CDS CFSAN001992_07155 NC_020307.1 1393721 1393984 R COG3777 Uncharacterized conserved protein; hypothetical protein complement(1393721..1393984) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471186.1 CDS CFSAN001992_07160 NC_020307.1 1394017 1394970 R COG2025 Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha complement(1394017..1394970) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471187.1 CDS CFSAN001992_07165 NC_020307.1 1394981 1395730 R COG2086 Electron transfer flavoprotein, beta subunit; Electron transfer flavoprotein subunit beta complement(1394981..1395730) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471188.1 CDS CFSAN001992_07170 NC_020307.1 1395753 1396268 R COG2301 Citrate lyase beta subunit; citrate lyase complement(1395753..1396268) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471189.1 CDS bssR NC_020307.1 1396982 1397365 R biofilm formation regulatory protein BssR complement(1396982..1397365) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471190.1 CDS rimO NC_020307.1 1397596 1398921 D COG0621 2-methylthioadenine synthetase; ribosomal protein S12 methylthiotransferase 1397596..1398921 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471191.1 CDS CFSAN001992_07185 NC_020307.1 1399012 1399923 R COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; glutathione ABC transporter permease GsiD complement(1399012..1399923) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471192.1 CDS CFSAN001992_07190 NC_020307.1 1399926 1400846 R COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; glutathione ABC transporter permease GsiC complement(1399926..1400846) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471193.1 CDS CFSAN001992_07195 NC_020307.1 1400907 1402445 R COG0747 ABC-type dipeptide transport system, periplasmic component; glutathione ABC transporter substrate-binding protein GsiB complement(1400907..1402445) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471194.1 CDS CFSAN001992_07200 NC_020307.1 1402478 1404349 R COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; glutathione transporter ATP-binding protein complement(1402478..1404349) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471195.1 CDS CFSAN001992_07205 NC_020307.1 1404360 1405301 R COG1446 Asparaginase; isoaspartyl peptidase complement(1404360..1405301) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471196.1 CDS CFSAN001992_07210 NC_020307.1 1405505 1406740 D COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis protein MoeA 1405505..1406740 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471197.1 CDS CFSAN001992_07215 NC_020307.1 1406740 1407489 D COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; molybdopterin biosynthesis protein MoeB 1406740..1407489 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471198.1 CDS CFSAN001992_07220 NC_020307.1 1407767 1408666 D COG1180 Pyruvate-formate lyase-activating enzyme; glycyl-radical enzyme activating protein family 1407767..1408666 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471199.1 CDS CFSAN001992_07225 NC_020307.1 1408672 1411104 D COG1882 Pyruvate-formate lyase; formate C-acetyltransferase 3 1408672..1411104 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471200.1 CDS CFSAN001992_07230 NC_020307.1 1411182 1411991 R COG0561 Predicted hydrolases of the HAD superfamily; sugar phosphatase SupH complement(1411182..1411991) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471201.1 CDS CFSAN001992_07235 NC_020307.1 1412253 1413518 D cytoplasmic protein 1412253..1413518 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471202.1 CDS CFSAN001992_07240 NC_020307.1 1413640 1415235 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein complement(1413640..1415235) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471203.1 CDS CFSAN001992_07245 NC_020307.1 1415454 1416374 D COG1376 Uncharacterized protein conserved in bacteria; L,D-transpeptidase 1415454..1416374 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471204.1 CDS CFSAN001992_07250 NC_020307.1 1416418 1417530 R COG0471 Di- and tricarboxylate transporters; Putative anion permease YbiR complement(1416418..1417530) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471205.1 CDS CFSAN001992_07255 NC_020307.1 1417527 1418000 R COG1321 Mn-dependent transcriptional regulator; manganese transport regulator MntR complement(1417527..1418000) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471206.1 CDS CFSAN001992_07260 NC_020307.1 1418243 1418413 R hypothetical protein complement(1418243..1418413) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471207.1 CDS CFSAN001992_07265 NC_020307.1 1418579 1420159 D COG2194 Predicted membrane-associated, metal-dependent hydrolase; UPF0141 inner membrane protein ybiP 1418579..1420159 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471208.1 CDS ompX NC_020307.1 1420223 1420738 R COG3637 Opacity protein and related surface antigens; outer membrane protein X complement(1420223..1420738) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471209.1 CDS CFSAN001992_07275 NC_020307.1 1421092 1421979 D COG5006 Predicted permease, DMT superfamily; threonine and homoserine efflux system 1421092..1421979 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471210.1 CDS CFSAN001992_07280 NC_020307.1 1422282 1422785 D COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); DNA starvation/stationary phase protection protein Dps 1422282..1422785 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471211.1 CDS CFSAN001992_07285 NC_020307.1 1423155 1423265 D hypothetical protein 1423155..1423265 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471212.1 CDS glnH NC_020307.1 1423262 1424008 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamine ABC transporter periplasmic protein 1423262..1424008 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471213.1 CDS glnP NC_020307.1 1424154 1424813 D COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter permease protein 1424154..1424813 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471214.1 CDS glnQ NC_020307.1 1424810 1425532 D COG1126 ABC-type polar amino acid transport system, ATPase component; glutamine ABC transporter ATP-binding protein 1424810..1425532 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471215.1 CDS CFSAN001992_07305 NC_020307.1 1425651 1427873 D COG0668 Small-conductance mechanosensitive channel; mechanosensitive channel protein 1425651..1427873 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471216.1 CDS CFSAN001992_07310 NC_020307.1 1427870 1428796 R COG3129 Predicted SAM-dependent methyltransferase; 23S rRNA mA1618 methyltransferase complement(1427870..1428796) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471217.1 CDS CFSAN001992_07315 NC_020307.1 1429001 1429267 D COG1734 DnaK suppressor protein; hypothetical protein 1429001..1429267 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471218.1 CDS CFSAN001992_07320 NC_020307.1 1429552 1429812 D hypothetical protein 1429552..1429812 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471219.1 CDS CFSAN001992_07325 NC_020307.1 1429968 1430942 R COG0547 Anthranilate phosphoribosyltransferase; glycosyl transferase family protein complement(1429968..1430942) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471220.1 CDS dinG NC_020307.1 1430972 1433116 R COG1199 Rad3-related DNA helicases; ATP-dependent DNA helicase DinG complement(1430972..1433116) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471221.1 CDS CFSAN001992_07335 NC_020307.1 1433324 1434685 R COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase RhlE complement(1433324..1434685) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471222.1 CDS CFSAN001992_07340 NC_020307.1 1434915 1435589 D COG1309 Transcriptional regulator; DNA-binding transcriptional regulator 1434915..1435589 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471223.1 CDS CFSAN001992_07345 NC_020307.1 1435589 1436584 D COG0845 Membrane-fusion protein; efflux pump membrane fusion protein 1435589..1436584 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471224.1 CDS CFSAN001992_07350 NC_020307.1 1436577 1438313 D COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein 1436577..1438313 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471225.1 CDS CFSAN001992_07355 NC_020307.1 1438306 1439436 D COG0842 ABC-type multidrug transport system, permease component; inner membrane transport permease YbhS 1438306..1439436 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471226.1 CDS CFSAN001992_07360 NC_020307.1 1439552 1440658 D COG0842 ABC-type multidrug transport system, permease component; ABC transporter G family member 20 1439552..1440658 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471227.1 CDS CFSAN001992_07365 NC_020307.1 1440620 1441030 R putative inner membrane protein complement(1440620..1441030) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471228.1 CDS CFSAN001992_07370 NC_020307.1 1441163 1441921 D COG3568 Metal-dependent hydrolase; hypothetical protein 1441163..1441921 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471229.1 CDS CFSAN001992_07375 NC_020307.1 1441918 1443159 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; cardiolipin synthase 2 1441918..1443159 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471230.1 CDS CFSAN001992_07380 NC_020307.1 1443159 1444121 D COG0392 Predicted integral membrane protein; Inner membrane protein ybhN 1443159..1444121 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471231.1 CDS CFSAN001992_07385 NC_020307.1 1444124 1444366 R hypothetical protein complement(1444124..1444366) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471232.1 CDS CFSAN001992_07390 NC_020307.1 1444555 1445262 R COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein complement(1444555..1445262) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471233.1 CDS CFSAN001992_07395 NC_020307.1 1445408 1446112 R COG0670 Integral membrane protein, interacts with FtsH; Glutamate [NMDA] receptor-associated protein 1 complement(1445408..1446112) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471234.1 CDS moaE NC_020307.1 1446160 1446612 R COG0314 Molybdopterin converting factor, large subunit; molybdopterin guanine dinucleotide biosynthesis protein MoaE complement(1446160..1446612) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471235.1 CDS moaD NC_020307.1 1446614 1446859 R COG1977 Molybdopterin converting factor, small subunit; molybdopterin synthase small subunit complement(1446614..1446859) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471236.1 CDS moaC NC_020307.1 1446852 1447337 R COG0315 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein MoaC complement(1446852..1447337) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471237.1 CDS CFSAN001992_07415 NC_020307.1 1447340 1447852 R COG0521 Molybdopterin biosynthesis enzymes; molybdopterin biosynthesis protein B complement(1447340..1447852) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471238.1 CDS moaA NC_020307.1 1447874 1448863 R COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein A complement(1447874..1448863) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471239.1 CDS CFSAN001992_07425 NC_020307.1 1449260 1450168 D COG0391 Uncharacterized conserved protein; hypothetical protein 1449260..1450168 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471240.1 CDS CFSAN001992_07430 NC_020307.1 1450258 1452525 R COG4886 Leucine-rich repeat (LRR) protein; E3 ubiquitin-protein ligase SlrP complement(1450258..1452525) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471241.1 CDS CFSAN001992_07435 NC_020307.1 1453015 1455036 R COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B complement(1453015..1455036) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471242.1 CDS bioD NC_020307.1 1455687 1456373 R COG0132 Dethiobiotin synthetase; dithiobiotin synthetase complement(1455687..1456373) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471243.1 CDS CFSAN001992_07445 NC_020307.1 1456366 1457121 R COG0500 SAM-dependent methyltransferases; biotin biosynthesis protein BioC complement(1456366..1457121) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471244.1 CDS CFSAN001992_07450 NC_020307.1 1457105 1458262 R COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase complement(1457105..1458262) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471245.1 CDS CFSAN001992_07455 NC_020307.1 1458259 1459299 R COG0502 Biotin synthase and related enzymes; biotin synthase complement(1458259..1459299) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471246.1 CDS CFSAN001992_07460 NC_020307.1 1459386 1460675 D COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine--8-amino-7-oxononanoate transaminase 1459386..1460675 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471247.1 CDS CFSAN001992_07465 NC_020307.1 1460733 1461209 D COG1881 Phospholipid-binding protein; kinase inhibitor protein 1460733..1461209 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471248.1 CDS CFSAN001992_07470 NC_020307.1 1461294 1462814 R COG2986 Histidine ammonia-lyase; histidine ammonia-lyase complement(1461294..1462814) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471249.1 CDS CFSAN001992_07475 NC_020307.1 1462816 1464501 R COG2987 Urocanate hydratase; urocanate hydratase complement(1462816..1464501) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471250.1 CDS CFSAN001992_07480 NC_020307.1 1464698 1465423 R COG2188 Transcriptional regulators; histidine utilization repressor complement(1464698..1465423) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471251.1 CDS CFSAN001992_07485 NC_020307.1 1465468 1466409 R COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; formimidoylglutamase complement(1465468..1466409) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471252.1 CDS CFSAN001992_07490 NC_020307.1 1466406 1467629 R COG1228 Imidazolonepropionase and related amidohydrolases; imidazolonepropionase complement(1466406..1467629) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471253.1 CDS CFSAN001992_07495 NC_020307.1 1467867 1469150 D COG4677 Pectin methylesterase; acyl-CoA thioesterase 1467867..1469150 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471254.1 CDS CFSAN001992_07500 NC_020307.1 1469294 1470289 R COG2706 3-carboxymuconate cyclase; 6-phosphogluconolactonase complement(1469294..1470289) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471255.1 CDS CFSAN001992_07505 NC_020307.1 1470411 1470608 D COG0561 Predicted hydrolases of the HAD superfamily; pyridoxal phosphate (PLP) phosphatase 1470411..1470608 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471256.1 CDS CFSAN001992_07510 NC_020307.1 1470733 1471569 D COG0561 Predicted hydrolases of the HAD superfamily; pyridoxal phosphate (PLP) phosphatase 1470733..1471569 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471257.1 CDS CFSAN001992_07515 NC_020307.1 1471887 1472348 D putative phage membrane protein 1471887..1472348 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471258.1 CDS CFSAN001992_07520 NC_020307.1 1472348 1472662 D hypothetical protein 1472348..1472662 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471259.1 CDS CFSAN001992_07525 NC_020307.1 1473060 1473191 D COG0561 Predicted hydrolases of the HAD superfamily; pyridoxal phosphate (PLP) phosphatase 1473060..1473191 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471260.1 CDS modC NC_020307.1 1473192 1474250 R COG4148 ABC-type molybdate transport system, ATPase component; molybdate transporter ATP-binding protein complement(1473192..1474250) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471261.1 CDS modB NC_020307.1 1474253 1474942 R COG4149 ABC-type molybdate transport system, permease component; molybdate ABC transporter permease protein complement(1474253..1474942) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471262.1 CDS modA NC_020307.1 1474942 1475715 R COG0725 ABC-type molybdate transport system, periplasmic component; molybdate transporter periplasmic protein complement(1474942..1475715) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471263.1 CDS CFSAN001992_07545 NC_020307.1 1475882 1476031 R hypothetical protein complement(1475882..1476031) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471264.1 CDS CFSAN001992_07550 NC_020307.1 1476160 1476948 D COG2005 N-terminal domain of molybdenum-binding protein; DNA-binding transcriptional regulator ModE 1476160..1476948 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471265.1 CDS CFSAN001992_07555 NC_020307.1 1477016 1478491 D COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; molybdenum transport ATP-binding protein ModF 1477016..1478491 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471266.1 CDS CFSAN001992_07560 NC_020307.1 1478662 1479570 D COG4714 Uncharacterized membrane-anchored protein conserved in bacteria; hypothetical protein 1478662..1479570 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471267.1 CDS CFSAN001992_07565 NC_020307.1 1479793 1480809 D COG1087 UDP-glucose 4-epimerase; UDP-galactose-4-epimerase 1479793..1480809 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471268.1 CDS CFSAN001992_07570 NC_020307.1 1480820 1481866 D COG1085 Galactose-1-phosphate uridylyltransferase; galactose-1-phosphate uridylyltransferase 1480820..1481866 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471269.1 CDS CFSAN001992_07575 NC_020307.1 1481869 1483017 D COG0153 Galactokinase; galactokinase 1481869..1483017 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471270.1 CDS galM NC_020307.1 1483011 1484051 D COG2017 Galactose mutarotase and related enzymes; galactose-1-epimerase 1483011..1484051 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471271.1 CDS gpmA NC_020307.1 1484275 1485027 D COG0588 Phosphoglycerate mutase 1; phosphoglyceromutase 1484275..1485027 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471272.1 CDS CFSAN001992_07590 NC_020307.1 1485118 1485894 R COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; ABC transporter ATP-binding protein complement(1485118..1485894) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471273.1 CDS CFSAN001992_07595 NC_020307.1 1485894 1486973 R COG0609 ABC-type Fe3+-siderophore transport system, permease component; putative ABC transporter permease protein complement(1485894..1486973) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471274.1 CDS CFSAN001992_07600 NC_020307.1 1487127 1488179 R COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1487127..1488179) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471275.1 CDS CFSAN001992_07605 NC_020307.1 1488499 1488885 D hypothetical protein 1488499..1488885 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471276.1 CDS CFSAN001992_07610 NC_020307.1 1488996 1489934 D COG1230 Co/Zn/Cd efflux system component; zinc transporter ZitB 1488996..1489934 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471277.1 CDS CFSAN001992_07615 NC_020307.1 1489931 1490650 R COG3201 Nicotinamide mononucleotide transporter; nicotinamide riboside transporter PnuC complement(1489931..1490650) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471278.1 CDS CFSAN001992_07620 NC_020307.1 1490675 1491718 R COG0379 Quinolinate synthase; quinolinate synthetase complement(1490675..1491718) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471279.1 CDS CFSAN001992_07625 NC_020307.1 1493079 1493618 D COG1301 Na+/H+-dicarboxylate symporters; hypothetical protein 1493079..1493618 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471280.1 CDS CFSAN001992_07630 NC_020307.1 1493223 1494011 R COG1729 Uncharacterized protein conserved in bacteria; tol-pal system protein YbgF complement(1493223..1494011) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471281.1 CDS CFSAN001992_07635 NC_020307.1 1494021 1494545 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated outer membrane lipoprotein complement(1494021..1494545) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471282.1 CDS tolB NC_020307.1 1494580 1495872 R COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB complement(1494580..1495872) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471283.1 CDS tolA NC_020307.1 1495996 1497174 R COG3064 Membrane protein involved in colicin uptake; cell envelope integrity inner membrane protein TolA complement(1495996..1497174) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471284.1 CDS CFSAN001992_07650 NC_020307.1 1497239 1497667 R COG0848 Biopolymer transport protein; colicin uptake protein TolR complement(1497239..1497667) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471285.1 CDS CFSAN001992_07655 NC_020307.1 1497671 1498363 R COG0811 Biopolymer transport proteins; colicin uptake protein TolQ complement(1497671..1498363) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471286.1 CDS CFSAN001992_07660 NC_020307.1 1498360 1498764 R COG0824 Predicted thioesterase; acyl-CoA thioesterase YbgC complement(1498360..1498764) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471287.1 CDS CFSAN001992_07665 NC_020307.1 1498993 1499286 R COG3790 Predicted membrane protein; hypothetical protein complement(1498993..1499286) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471288.1 CDS CFSAN001992_07670 NC_020307.1 1499286 1499399 R COG4890 Predicted outer membrane lipoprotein; hypothetical protein complement(1499286..1499399) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471289.1 CDS CFSAN001992_07675 NC_020307.1 1499414 1500553 R COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome d ubiquinol oxidase subunit 2 complement(1499414..1500553) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471290.1 CDS CFSAN001992_07680 NC_020307.1 1500569 1502137 R COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cytochrome d terminal oxidase subunit 1 complement(1500569..1502137) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471291.1 CDS CFSAN001992_07685 NC_020307.1 1502264 1502344 D hypothetical protein 1502264..1502344 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471292.1 CDS CFSAN001992_07690 NC_020307.1 1503567 1503692 R hypothetical protein complement(1503567..1503692) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471293.1 CDS CFSAN001992_07695 NC_020307.1 1503721 1504590 R COG0074 Succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha complement(1503721..1504590) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471294.1 CDS sucC NC_020307.1 1504590 1505756 R COG0045 Succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta complement(1504590..1505756) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471295.1 CDS CFSAN001992_07705 NC_020307.1 1505898 1507106 R COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; dihydrolipoamide succinyltransferase complement(1505898..1507106) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471296.1 CDS sucA NC_020307.1 1507121 1509922 R COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes; 2-oxoglutarate dehydrogenase E1 component complement(1507121..1509922) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471297.1 CDS sdhB NC_020307.1 1510448 1511164 R COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; succinate dehydrogenase iron-sulfur subunit complement(1510448..1511164) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471298.1 CDS sdhA NC_020307.1 1511181 1512947 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; succinate dehydrogenase flavoprotein subunit complement(1511181..1512947) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471299.1 CDS sdhD NC_020307.1 1512947 1513294 R COG2142 Succinate dehydrogenase, hydrophobic anchor subunit; succinate dehydrogenase cytochrome b556 small membrane subunit complement(1512947..1513294) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471300.1 CDS sdhC NC_020307.1 1513288 1513677 R COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; succinate dehydrogenase cytochrome b556 large membrane subunit complement(1513288..1513677) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471301.1 CDS gltA NC_020307.1 1514432 1515715 D COG0372 Citrate synthase; type II citrate synthase 1514432..1515715 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471302.1 CDS CFSAN001992_07740 NC_020307.1 1515850 1516896 D COG3180 Putative ammonia monooxygenase; aidB regulatorAbrB 1515850..1516896 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471303.1 CDS CFSAN001992_07745 NC_020307.1 1516951 1517742 R COG0266 Formamidopyrimidine-DNA glycosylase; endonuclease VIII complement(1516951..1517742) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471304.1 CDS CFSAN001992_07750 NC_020307.1 1517776 1517928 R putative glycosyl transferase complement(1517776..1517928) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471305.1 CDS CFSAN001992_07755 NC_020307.1 1517996 1519954 R COG5610 Predicted hydrolase (HAD superfamily); glycosyl transferase complement(1517996..1519954) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471306.1 CDS CFSAN001992_07760 NC_020307.1 1519958 1520791 R COG0463 Glycosyltransferases involved in cell wall biogenesis; putative glycosyltransferase complement(1519958..1520791) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471307.1 CDS CFSAN001992_07765 NC_020307.1 1520983 1522761 R COG1216 Predicted glycosyltransferases; glycosyltransferase, cell wall biogenesis complement(1520983..1522761) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471308.1 CDS CFSAN001992_07780 NC_020307.1 1523568 1524338 R COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; O-antigen export system, permease complement(1523568..1524338) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471309.1 CDS CFSAN001992_07785 NC_020307.1 1524466 1525599 R COG0438 Glycosyltransferase; galactosyltransferase complement(1524466..1525599) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471310.1 CDS CFSAN001992_07790 NC_020307.1 1525612 1526505 R COG1216 Predicted glycosyltransferases; glycosyl transferase family protein complement(1525612..1526505) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471311.1 CDS CFSAN001992_07795 NC_020307.1 1526505 1527656 R COG0562 UDP-galactopyranose mutase; UDP-galactopyranose mutase complement(1526505..1527656) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471312.1 CDS CFSAN001992_07800 NC_020307.1 1527942 1528682 R hypothetical protein complement(1527942..1528682) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471313.1 CDS CFSAN001992_07805 NC_020307.1 1528684 1528905 R hypothetical protein complement(1528684..1528905) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471314.1 CDS CFSAN001992_07810 NC_020307.1 1529479 1530045 R COG0582 Integrase; hypothetical protein complement(1529479..1530045) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471315.1 CDS CFSAN001992_07815 NC_020307.1 1530560 1531294 R COG1540 Uncharacterized proteins, homologs of lactam utilization protein B; LamB/YcsF family protein complement(1530560..1531294) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471316.1 CDS CFSAN001992_07820 NC_020307.1 1531284 1532216 R COG1984 Allophanate hydrolase subunit 2; allophanate hydrolase 2 subunit 2 complement(1531284..1532216) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471317.1 CDS CFSAN001992_07825 NC_020307.1 1532210 1532866 R COG2049 Allophanate hydrolase subunit 1; hypothetical protein complement(1532210..1532866) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471318.1 CDS CFSAN001992_07830 NC_020307.1 1532882 1533625 R COG0327 Uncharacterized conserved protein; metal-binding protein complement(1532882..1533625) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471319.1 CDS CFSAN001992_07835 NC_020307.1 1533954 1535435 D COG3104 Dipeptide/tripeptide permease; dipeptide/tripeptide permease D 1533954..1535435 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471320.1 CDS CFSAN001992_07840 NC_020307.1 1535474 1536895 R COG0415 Deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photolyase complement(1535474..1536895) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471321.1 CDS CFSAN001992_07845 NC_020307.1 1537006 1537212 R hypothetical protein complement(1537006..1537212) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471322.1 CDS CFSAN001992_07850 NC_020307.1 1537549 1537638 D K+-transporting ATPase, F subunit 1537549..1537638 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471323.1 CDS CFSAN001992_07855 NC_020307.1 1537638 1539317 D COG2060 K+-transporting ATPase, A chain; potassium-transporting ATPase subunit A 1537638..1539317 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471324.1 CDS CFSAN001992_07860 NC_020307.1 1539338 1541386 D COG2216 High-affinity K+ transport system, ATPase chain B; potassium-transporting ATPase subunit B 1539338..1541386 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471325.1 CDS CFSAN001992_07865 NC_020307.1 1541395 1541979 D COG2156 K+-transporting ATPase, c chain; potassium-transporting ATPase subunit C 1541395..1541979 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471326.1 CDS CFSAN001992_07870 NC_020307.1 1541976 1544660 D COG2205 Osmosensitive K+ channel histidine kinase; sensor protein KdpD 1541976..1544660 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471327.1 CDS CFSAN001992_07875 NC_020307.1 1544657 1545334 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional activator KdpE 1544657..1545334 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471328.1 CDS CFSAN001992_07880 NC_020307.1 1545585 1545698 R hypothetical protein complement(1545585..1545698) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471329.1 CDS CFSAN001992_07885 NC_020307.1 1546096 1548294 D COG1982 Arginine/lysine/ornithine decarboxylases; ornithine decarboxylase 1546096..1548294 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471330.1 CDS potE NC_020307.1 1548291 1549610 D COG0531 Amino acid transporters; putrescine transporter 1548291..1549610 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471331.1 CDS CFSAN001992_07895 NC_020307.1 1549675 1550160 D COG3467 Predicted flavin-nucleotide-binding protein; putative cytoplasmic protein 1549675..1550160 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471332.1 CDS CFSAN001992_07900 NC_020307.1 1550180 1550275 R hypothetical protein complement(1550180..1550275) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471333.1 CDS CFSAN001992_07905 NC_020307.1 1550275 1551915 R COG0033 Phosphoglucomutase; phosphoglucomutase complement(1550275..1551915) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471334.1 CDS CFSAN001992_07910 NC_020307.1 1551940 1552482 R COG3057 Negative regulator of replication initiationR; replication initiation regulator SeqA complement(1551940..1552482) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471335.1 CDS CFSAN001992_07915 NC_020307.1 1552667 1553437 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); acyl-CoA esterase 1552667..1553437 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471336.1 CDS CFSAN001992_07920 NC_020307.1 1553571 1553864 D LexA regulated protein 1553571..1553864 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471337.1 CDS CFSAN001992_07925 NC_020307.1 1554015 1554545 D COG0716 Flavodoxins; flavodoxin FldA 1554015..1554545 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471338.1 CDS fur NC_020307.1 1554827 1555279 D COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulator 1554827..1555279 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471339.1 CDS CFSAN001992_07935 NC_020307.1 1555394 1556320 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1555394..1556320 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471340.1 CDS CFSAN001992_07940 NC_020307.1 1556418 1557821 D COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; tricarballylate dehydrogenase 1556418..1557821 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471341.1 CDS CFSAN001992_07945 NC_020307.1 1557808 1558947 D COG0247 Fe-S oxidoreductase; tricarballylate utilization protein B 1557808..1558947 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471342.1 CDS CFSAN001992_07950 NC_020307.1 1558998 1560302 D COG0477 Permeases of the major facilitator superfamily; citrate-proton symporter 1558998..1560302 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471343.1 CDS CFSAN001992_07955 NC_020307.1 1560351 1560683 R putative lipoprotein ybfN Flags: Precursor complement(1560351..1560683) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471344.1 CDS chiP NC_020307.1 1560733 1562139 R chitoporin complement(1560733..1562139) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471345.1 CDS CFSAN001992_07965 NC_020307.1 1562585 1564249 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutaminyl-tRNA ligase complement(1562585..1564249) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471346.1 CDS CFSAN001992_07970 NC_020307.1 1564460 1566412 R COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; PTS system N-acetyl glucosamine specific transporter subunits IIABC complement(1564460..1566412) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471347.1 CDS nagB NC_020307.1 1566739 1567539 D COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; glucosamine-6-phosphate deaminase 1566739..1567539 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471348.1 CDS nagA NC_020307.1 1567599 1568753 D COG1820 N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase 1567599..1568753 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471349.1 CDS CFSAN001992_07985 NC_020307.1 1568758 1569978 D COG1940 Transcriptional regulator/sugar kinase; DNA-binding transcriptional dual regulator NagC 1568758..1569978 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471350.1 CDS CFSAN001992_07990 NC_020307.1 1570025 1570777 D COG0647 Predicted sugar phosphatases of the HAD superfamily; UMP phosphatase 1570025..1570777 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471351.1 CDS asnB NC_020307.1 1571067 1572731 D COG0367 Asparagine synthase (glutamine-hydrolyzing); asparagine synthetase B 1571067..1572731 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471352.1 CDS ubiF NC_020307.1 1573794 1574969 R COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase complement(1573794..1574969) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471353.1 CDS CFSAN001992_08005 NC_020307.1 1575113 1576537 D COG0621 2-methylthioadenine synthetase; (dimethylallyl)adenosine tRNA methylthiotransferase 1575113..1576537 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471354.1 CDS CFSAN001992_08010 NC_020307.1 1576742 1577788 D COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase; PhoH-like protein 1576742..1577788 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471355.1 CDS CFSAN001992_08015 NC_020307.1 1577785 1578258 D COG0319 Predicted metal-dependent hydrolase; metal-binding heat shock protein 1577785..1578258 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471356.1 CDS CFSAN001992_08020 NC_020307.1 1578416 1579294 D COG4535 Putative Mg2+ and Co2+ transporter CorC; magnesium/cobalt efflux protein CorC 1578416..1579294 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471357.1 CDS lnt NC_020307.1 1579314 1580852 D COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 1579314..1580852 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471358.1 CDS CFSAN001992_08030 NC_020307.1 1581207 1582115 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamate and aspartate transporter subunit 1581207..1582115 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471359.1 CDS CFSAN001992_08035 NC_020307.1 1582275 1583015 D COG0765 ABC-type amino acid transport system, permease component; glutamate/aspartate ABC transporter permease GltJ 1582275..1583015 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471360.1 CDS CFSAN001992_08040 NC_020307.1 1583015 1583689 D COG0765 ABC-type amino acid transport system, permease component; glutamate/aspartate transport system permease GltK 1583015..1583689 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471361.1 CDS CFSAN001992_08045 NC_020307.1 1583689 1584414 D COG1126 ABC-type polar amino acid transport system, ATPase component; glutamate/aspartate transport ATP-binding protein GltL 1583689..1584414 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471362.1 CDS rihA NC_020307.1 1584531 1585466 D COG1957 Inosine-uridine nucleoside N-ribohydrolase; ribonucleoside hydrolase 1 1584531..1585466 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471363.1 CDS CFSAN001992_08055 NC_020307.1 1585552 1586025 R COG0542 ATPases with chaperone activity, ATP-binding subunit; hypothetical protein complement(1585552..1586025) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471364.1 CDS CFSAN001992_08070 NC_020307.1 1588113 1588955 R 2-keto-3-deoxygluconate permease complement(1588113..1588955) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471365.1 CDS CFSAN001992_08075 NC_020307.1 1589005 1590177 R COG2721 Altronate dehydratase; hydrolase complement(1589005..1590177) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471366.1 CDS CFSAN001992_08080 NC_020307.1 1590194 1590484 R COG2721 Altronate dehydratase; putative hydrolase complement(1590194..1590484) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471367.1 CDS leuS NC_020307.1 1590772 1593354 D COG0495 Leucyl-tRNA synthetase; leucyl-tRNA ligase 1590772..1593354 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471368.1 CDS CFSAN001992_08090 NC_020307.1 1593369 1593959 D COG2980 Rare lipoprotein B; LPS-assembly lipoprotein RlpB 1593369..1593959 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471369.1 CDS holA NC_020307.1 1593959 1594990 D COG1466 DNA polymerase III, delta subunit; DNA polymerase III subunit delta 1593959..1594990 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471370.1 CDS nadD NC_020307.1 1594992 1595633 D COG1057 Nicotinic acid mononucleotide adenylyltransferase; nicotinic acid mononucleotide adenylyltransferase 1594992..1595633 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471371.1 CDS CFSAN001992_08105 NC_020307.1 1595608 1596702 R COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; threonine-phosphate decarboxylase complement(1595608..1596702) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471372.1 CDS CFSAN001992_08110 NC_020307.1 1596799 1597407 D COG0406 Fructose-2,6-bisphosphatase; alpha-ribazole phosphatase 1596799..1597407 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471373.1 CDS CFSAN001992_08115 NC_020307.1 1597407 1597547 D hypothetical protein 1597407..1597547 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471374.1 CDS CFSAN001992_08120 NC_020307.1 1597735 1598052 D COG0799 Uncharacterized homolog of plant Iojap protein; ribosome-associated protein 1597735..1598052 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471375.1 CDS CFSAN001992_08125 NC_020307.1 1598056 1598523 D COG1576 Uncharacterized conserved protein; rRNA large subunit methyltransferase 1598056..1598523 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471376.1 CDS CFSAN001992_08130 NC_020307.1 1598554 1600455 D COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 1598554..1600455 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471377.1 CDS CFSAN001992_08135 NC_020307.1 1600458 1601570 D COG0772 Bacterial cell division membrane protein; cell wall shape-determining protein 1600458..1601570 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471378.1 CDS CFSAN001992_08140 NC_020307.1 1601581 1602714 D COG0797 Lipoproteins; rare lipoprotein A 1601581..1602714 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471379.1 CDS CFSAN001992_08145 NC_020307.1 1602854 1604065 D COG1686 D-alanyl-D-alanine carboxypeptidase; D-alanyl-D-alanine carboxypeptidase fraction A 1602854..1604065 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471380.1 CDS CFSAN001992_08150 NC_020307.1 1604174 1604437 D COG2921 Uncharacterized conserved protein; hypothetical protein 1604174..1604437 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471381.1 CDS CFSAN001992_08155 NC_020307.1 1604537 1605178 D COG0321 Lipoate-protein ligase B; lipoate-protein ligase B 1604537..1605178 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471382.1 CDS CFSAN001992_08160 NC_020307.1 1605480 1606433 D COG0583 Transcriptional regulator; DNA-binding transcriptional regulator 1605480..1606433 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471383.1 CDS CFSAN001992_08165 NC_020307.1 1606639 1607604 D COG0320 Lipoate synthase; lipoyl synthase 1606639..1607604 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471384.1 CDS tatE NC_020307.1 1607690 1607893 R COG1826 Sec-independent protein secretion pathway components; twin arginine translocase protein E complement(1607690..1607893) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471385.1 CDS CFSAN001992_08175 NC_020307.1 1608022 1608810 R COG0388 Predicted amidohydrolase; hydrolase YbeM complement(1608022..1608810) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471386.1 CDS CFSAN001992_08180 NC_020307.1 1608901 1609284 D COG0239 Integral membrane protein possibly involved in chromosome condensation; chromosome condensation membrane protein 1608901..1609284 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471387.1 CDS cspE NC_020307.1 1609344 1609553 R COG1278 Cold shock proteins; cold shock protein CspE complement(1609344..1609553) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471388.1 CDS pagP NC_020307.1 1609741 1610301 R phospholipid:lipid A palmitoyltransferase complement(1609741..1610301) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471389.1 CDS dcuC NC_020307.1 1610692 1612077 D COG3069 C4-dicarboxylate transporter; C4-dicarboxylate transporter DcuC 1610692..1612077 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471390.1 CDS dpiA NC_020307.1 1612131 1612811 R COG4565 Response regulator of citrate/malate metabolism; two-component response regulator DpiA complement(1612131..1612811) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471391.1 CDS dpiB NC_020307.1 1612962 1614440 R COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; sensor histidine kinase DpiB complement(1612962..1614440) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471392.1 CDS CFSAN001992_08210 NC_020307.1 1614826 1615902 D COG3053 Citrate lyase synthetase; [citrate [pro-3S]-lyase] ligase 1614826..1615902 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471393.1 CDS CFSAN001992_08215 NC_020307.1 1615899 1616195 D COG3052 Citrate lyase, gamma subunit; citrate lyase subunit gamma 1615899..1616195 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471394.1 CDS CFSAN001992_08220 NC_020307.1 1616192 1617100 D COG2301 Citrate lyase beta subunit; citrate lyase subunit beta 1616192..1617100 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471395.1 CDS CFSAN001992_08225 NC_020307.1 1617110 1618639 D COG3051 Citrate lyase, alpha subunit; citrate lyase subunit alpha 1617110..1618639 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471396.1 CDS citX NC_020307.1 1618643 1619194 D COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase); 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyase 1618643..1619194 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471397.1 CDS citG NC_020307.1 1619166 1620062 D COG1767 Triphosphoribosyl-dephospho-CoA synthetase; triphosphoribosyl-dephospho-CoA synthase 1619166..1620062 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471398.1 CDS CFSAN001992_08240 NC_020307.1 1620100 1621563 D COG0471 Di- and tricarboxylate transporters; citrate:succinate antiporter 1620100..1621563 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471399.1 CDS CFSAN001992_08245 NC_020307.1 1621673 1622479 D COG3719 Ribonuclease I; ribonuclease I 1621673..1622479 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471400.1 CDS CFSAN001992_08250 NC_020307.1 1622714 1623124 D COG0782 Transcription elongation factor; nucleoside diphosphate kinase regulator 1622714..1623124 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471401.1 CDS CFSAN001992_08255 NC_020307.1 1623207 1624445 R COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; putative zinc-type alcohol dehydrogenase-like protein ybdR complement(1623207..1624445) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471402.1 CDS CFSAN001992_08260 NC_020307.1 1624668 1625096 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress protein UspG 1624668..1625096 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471403.1 CDS CFSAN001992_08265 NC_020307.1 1625163 1625930 R COG3302 DMSO reductase anchor subunit; molybdopterin-containing oxidoreductase membrane anchor subunit complement(1625163..1625930) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471404.1 CDS CFSAN001992_08270 NC_020307.1 1625930 1626487 R COG0437 Fe-S-cluster-containing hydrogenase components 1; molybdopterin-containing oxidoreductase iron-sulfur subunit complement(1625930..1626487) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471405.1 CDS CFSAN001992_08275 NC_020307.1 1626484 1628763 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; molybdopterin-containing oxidoreductase catalytic subunit complement(1626484..1628763) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471406.1 CDS CFSAN001992_08280 NC_020307.1 1628756 1629316 R COG3381 Uncharacterized component of anaerobic dehydrogenases; Nitrate reductase subunit delta complement(1628756..1629316) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471407.1 CDS CFSAN001992_08285 NC_020307.1 1629649 1631214 R COG3634 Alkyl hydroperoxide reductase, large subunit; alkyl hydroperoxide reductase subunit F complement(1629649..1631214) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471408.1 CDS CFSAN001992_08290 NC_020307.1 1631456 1632019 R COG0450 Peroxiredoxin; alkyl hydroperoxide reductase subunit C complement(1631456..1632019) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471409.1 CDS dsbG NC_020307.1 1632460 1633206 D COG1651 Protein-disulfide isomerase; disulfide isomerase/thiol-disulfide oxidase 1632460..1633206 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471410.1 CDS CFSAN001992_08300 NC_020307.1 1633523 1634416 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1633523..1634416 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471411.1 CDS CFSAN001992_08305 NC_020307.1 1634582 1635817 D COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase; IbrA protein 1634582..1635817 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471412.1 CDS CFSAN001992_08310 NC_020307.1 1635778 1636407 D COG1475 Predicted transcriptional regulators; hypothetical protein 1635778..1636407 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471413.1 CDS CFSAN001992_08315 NC_020307.1 1636408 1637568 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; methionine aminotransferase complement(1636408..1637568) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471414.1 CDS CFSAN001992_08320 NC_020307.1 1637695 1638783 D COG0371 Glycerol dehydrogenase and related enzymes; oxidoreductase 1637695..1638783 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471415.1 CDS CFSAN001992_08325 NC_020307.1 1638819 1639016 R COG2879 Uncharacterized small protein; hypothetical protein complement(1638819..1639016) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471416.1 CDS CFSAN001992_08330 NC_020307.1 1639080 1641185 R COG1966 Carbon starvation protein, predicted membrane protein; carbon starvation protein A complement(1639080..1641185) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471417.1 CDS CFSAN001992_08335 NC_020307.1 1641367 1641780 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; thioesterase complement(1641367..1641780) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471418.1 CDS CFSAN001992_08340 NC_020307.1 1641783 1642538 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 2,3-dihydroxybenzoate-2,3-dehydrogenase complement(1641783..1642538) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471419.1 CDS CFSAN001992_08345 NC_020307.1 1642538 1643395 R COG1535 Isochorismate hydrolase; isochorismatase complement(1642538..1643395) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471420.1 CDS entE NC_020307.1 1643409 1645019 R COG1021 Peptide arylation enzymes; enterobactin synthase subunit E complement(1643409..1645019) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471421.1 CDS CFSAN001992_08355 NC_020307.1 1645029 1646204 R COG1169 Isochorismate synthase; isochorismate synthase EntC complement(1645029..1646204) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471422.1 CDS CFSAN001992_08360 NC_020307.1 1646513 1647469 D COG4592 ABC-type Fe2+-enterobactin transport system, periplasmic component; iron-enterobactin transporter periplasmic binding protein 1646513..1647469 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471423.1 CDS CFSAN001992_08365 NC_020307.1 1647532 1648776 R COG0477 Permeases of the major facilitator superfamily; enterobactin exporter EntS complement(1647532..1648776) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471424.1 CDS CFSAN001992_08370 NC_020307.1 1648892 1649893 D COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron-enterobactin transporter membrane protein 1648892..1649893 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471425.1 CDS CFSAN001992_08375 NC_020307.1 1649890 1650882 D COG4779 ABC-type enterobactin transport system, permease component; iron-enterobactin transporter permease 1649890..1650882 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471426.1 CDS CFSAN001992_08380 NC_020307.1 1650879 1651673 D COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron-enterobactin transporter ATP-binding protein 1650879..1651673 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471427.1 CDS CFSAN001992_08385 NC_020307.1 1651727 1652863 R COG3765 Chain length determinant protein; LPS O-antigen length regulator complement(1651727..1652863) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471428.1 CDS CFSAN001992_08400 NC_020307.1 1656996 1657214 R COG3251 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1656996..1657214) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471429.1 CDS CFSAN001992_08405 NC_020307.1 1657245 1658459 R COG2382 Enterochelin esterase and related enzymes; enterobactin/ferric enterobactin esterase complement(1657245..1658459) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471430.1 CDS CFSAN001992_08410 NC_020307.1 1658648 1660903 D COG4771 Outer membrane receptor for ferrienterochelin and colicins; outer membrane receptor FepA 1658648..1660903 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471431.1 CDS CFSAN001992_08415 NC_020307.1 1660950 1661654 D COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex 1660950..1661654 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471432.1 CDS CFSAN001992_08420 NC_020307.1 1661666 1662784 D COG2170 Uncharacterized conserved protein; gamma-glutamyl:cysteine ligase 1661666..1662784 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471433.1 CDS CFSAN001992_08425 NC_020307.1 1662851 1663099 D hypothetical protein 1662851..1663099 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471434.1 CDS CFSAN001992_08430 NC_020307.1 1663105 1663446 R COG2207 AraC-type DNA-binding domain-containing proteins; transposon Tn10 TetD protein complement(1663105..1663446) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471435.1 CDS CFSAN001992_08435 NC_020307.1 1663735 1664316 D COG1309 Transcriptional regulator; HTH-type transcriptional repressor Bm3R1 1663735..1664316 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471436.1 CDS CFSAN001992_08440 NC_020307.1 1664316 1664684 D COG2315 Uncharacterized protein conserved in bacteria; hypothetical protein 1664316..1664684 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471437.1 CDS CFSAN001992_08445 NC_020307.1 1664781 1665434 D COG0778 Nitroreductase; dihydropteridine reductase 1664781..1665434 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471438.1 CDS CFSAN001992_08450 NC_020307.1 1665701 1667671 R COG3240 Phospholipase/lecithinase/hemolysin; Esterase estA Flags: Precursor complement(1665701..1667671) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471439.1 CDS CFSAN001992_08455 NC_020307.1 1667982 1669229 D COG0668 Small-conductance mechanosensitive channel; hypothetical protein 1667982..1669229 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471440.1 CDS CFSAN001992_08460 NC_020307.1 1669271 1670665 R COG1113 Gamma-aminobutyrate permease and related permeases; phenylalanine transporter complement(1669271..1670665) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471441.1 CDS CFSAN001992_08465 NC_020307.1 1670991 1672166 D COG1076 DnaJ-domain-containing proteins 1; DNA repair ATPase 1670991..1672166 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471442.1 CDS CFSAN001992_08470 NC_020307.1 1672245 1672805 R COG3059 Predicted membrane protein; Inner membrane protein ykgB complement(1672245..1672805) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471443.1 CDS CFSAN001992_08475 NC_020307.1 1672818 1673054 R hypothetical protein complement(1672818..1673054) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471444.1 CDS CFSAN001992_08480 NC_020307.1 1673211 1674536 R COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; pyridine nucleotide-disulfide oxidoreductase complement(1673211..1674536) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471445.1 CDS CFSAN001992_08485 NC_020307.1 1674752 1675606 D COG2207 AraC-type DNA-binding domain-containing proteins; putative araC-family transcriptional regulator 1674752..1675606 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471446.1 CDS CFSAN001992_08490 NC_020307.1 1675657 1676118 R COG3696 Putative silver efflux pump; hypothetical protein complement(1675657..1676118) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471447.1 CDS CFSAN001992_08495 NC_020307.1 1676501 1676746 D copE1 1676501..1676746 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471448.1 CDS CFSAN001992_08500 NC_020307.1 1677171 1677533 D COG2246 Predicted membrane protein; Bactoprenol-linked glucose translocase 1677171..1677533 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471449.1 CDS CFSAN001992_08505 NC_020307.1 1677530 1678456 D COG0463 Glycosyltransferases involved in cell wall biogenesis; bactoprenol glucosyl transferase 1677530..1678456 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471450.1 CDS CFSAN001992_08510 NC_020307.1 1678449 1680089 D putative inner membrane protein 1678449..1680089 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471451.1 CDS CFSAN001992_08515 NC_020307.1 1680146 1680304 R hypothetical protein complement(1680146..1680304) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471452.1 CDS CFSAN001992_08520 NC_020307.1 1680476 1680694 D COG2963 Transposase and inactivated derivatives; transposase 1680476..1680694 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471453.1 CDS CFSAN001992_08525 NC_020307.1 1681568 1682164 D fimbriae regulatory protein FimW 1681568..1682164 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471454.1 CDS CFSAN001992_08530 NC_020307.1 1682326 1682637 D COG2200 FOG: EAL domain; hypothetical protein 1682326..1682637 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471455.1 CDS CFSAN001992_08535 NC_020307.1 1682656 1683378 D COG1270 Cobalamin biosynthesis protein CobD/CbiB; fimbriae Y protein 1682656..1683378 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471456.1 CDS CFSAN001992_08540 NC_020307.1 1683982 1684614 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional regulator FimZ 1683982..1684614 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471457.1 CDS CFSAN001992_08545 NC_020307.1 1684660 1685178 R COG3539 P pilus assembly protein, pilin FimA; fimbrial-like adhesin protein SfmF complement(1684660..1685178) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471458.1 CDS fimH NC_020307.1 1685188 1686195 R fimbrial-like adhesin complement(1685188..1686195) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471459.1 CDS CFSAN001992_08555 NC_020307.1 1686210 1688822 R COG3188 P pilus assembly protein, porin PapC; outer membrane usher protein FimD complement(1686210..1688822) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471460.1 CDS CFSAN001992_08560 NC_020307.1 1688853 1689545 R COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone protein FimC complement(1688853..1689545) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471461.1 CDS CFSAN001992_08565 NC_020307.1 1689589 1690122 R COG3539 P pilus assembly protein, pilin FimA; fimbrial protein FimI complement(1689589..1690122) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471462.1 CDS CFSAN001992_08570 NC_020307.1 1690197 1690754 R COG3539 P pilus assembly protein, pilin FimA; type-1 fimbrial protein subunit A complement(1690197..1690754) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471463.1 CDS CFSAN001992_08575 NC_020307.1 1691301 1692167 D COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1691301..1692167 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471464.1 CDS CFSAN001992_08580 NC_020307.1 1692169 1692381 D COG2501 Uncharacterized conserved protein; ribosome-associated protein 1692169..1692381 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471465.1 CDS CFSAN001992_08585 NC_020307.1 1692509 1693054 D COG1988 Predicted membrane-bound metal-dependent hydrolases; membrane-bound metal-dependent hydrolase 1692509..1693054 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471466.1 CDS CFSAN001992_08590 NC_020307.1 1693047 1693484 D hypothetical protein 1693047..1693484 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471467.1 CDS CFSAN001992_08595 NC_020307.1 1693481 1694305 D COG4727 Uncharacterized protein conserved in bacteria; exported outer membrane protein 1693481..1694305 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471468.1 CDS cysS NC_020307.1 1694349 1695734 R COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA ligase complement(1694349..1695734) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471469.1 CDS CFSAN001992_08605 NC_020307.1 1695907 1696401 D COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase B (rotamase B) 1695907..1696401 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471470.1 CDS CFSAN001992_08610 NC_020307.1 1696404 1697126 D COG2908 Uncharacterized protein conserved in bacteria; UDP-2,3-diacylglucosamine hydrolase 1696404..1697126 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471471.1 CDS purE NC_020307.1 1697244 1697753 D COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; N5-carboxyaminoimidazole ribonucleotide mutase 1697244..1697753 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471472.1 CDS CFSAN001992_08620 NC_020307.1 1697750 1698817 D COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); phosphoribosylaminoimidazole carboxylase ATPase subunit 1697750..1698817 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471473.1 CDS CFSAN001992_08625 NC_020307.1 1698913 1699998 D COG2603 Predicted ATPase; tRNA 2-selenouridine synthase 1698913..1699998 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471474.1 CDS CFSAN001992_08630 NC_020307.1 1700037 1700696 R COG2011 ABC-type metal ion transport system, permease component; putative D-methionine transport system permease protein metI complement(1700037..1700696) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471475.1 CDS CFSAN001992_08635 NC_020307.1 1700689 1701705 R COG1135 ABC-type metal ion transport system, ATPase component; ABC transporter ATP-binding protein complement(1700689..1701705) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471476.1 CDS CFSAN001992_08640 NC_020307.1 1701742 1702572 R COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; lipoprotein complement(1701742..1702572) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471477.1 CDS CFSAN001992_08645 NC_020307.1 1702829 1703962 R COG3203 Outer membrane protein (porin); Outer membrane pore protein E Flags: Precursor complement(1702829..1703962) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471478.1 CDS CFSAN001992_08650 NC_020307.1 1704148 1706562 R COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component; hypothetical protein complement(1704148..1706562) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471479.1 CDS CFSAN001992_08655 NC_020307.1 1706559 1707245 R COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; ABC transporter ATP-binding protein YbbA complement(1706559..1707245) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471480.1 CDS CFSAN001992_08660 NC_020307.1 1707216 1707830 D COG2755 Lysophospholipase L1 and related esterases; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 1707216..1707830 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471481.1 CDS CFSAN001992_08665 NC_020307.1 1707985 1708755 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase 1707985..1708755 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471482.1 CDS CFSAN001992_08670 NC_020307.1 1708815 1709669 D COG3118 Thioredoxin domain-containing protein; Thioredoxin domain-containing protein EC-YbbN 1708815..1709669 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471483.1 CDS CFSAN001992_08675 NC_020307.1 1709755 1710534 R COG0390 ABC-type uncharacterized transport system, permease component; metal resistance protein complement(1709755..1710534) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471484.1 CDS CFSAN001992_08680 NC_020307.1 1710521 1711198 R COG4619 ABC-type uncharacterized transport system, ATPase component; ABC transporter ATP-binding protein YbbL complement(1710521..1711198) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471485.1 CDS CFSAN001992_08685 NC_020307.1 1711345 1712262 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein 1711345..1712262 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471486.1 CDS CFSAN001992_08690 NC_020307.1 1712259 1712711 D COG1585 Membrane protein implicated in regulation of membrane protease activity; nodulation efficiency family protein 1712259..1712711 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471487.1 CDS CFSAN001992_08695 NC_020307.1 1712712 1713128 R COG0789 Predicted transcriptional regulators; DNA-binding transcriptional regulator CueR complement(1712712..1713128) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471488.1 CDS copA NC_020307.1 1713238 1715739 D COG2217 Cation transport ATPase; copper exporting ATPase 1713238..1715739 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471489.1 CDS CFSAN001992_08705 NC_020307.1 1715892 1716467 D secreted protein 1715892..1716467 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471490.1 CDS CFSAN001992_08710 NC_020307.1 1716578 1716718 D putative secreted protein 1716578..1716718 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471491.1 CDS CFSAN001992_08715 NC_020307.1 1716804 1717598 D COG3735 Uncharacterized protein conserved in bacteria; GumN family protein 1716804..1717598 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471492.1 CDS CFSAN001992_08720 NC_020307.1 1717800 1718279 D COG2606 Uncharacterized conserved protein; hypothetical protein 1717800..1718279 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471493.1 CDS ushA NC_020307.1 1718396 1720048 R COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor complement(1718396..1720048) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471494.1 CDS CFSAN001992_08730 NC_020307.1 1720221 1721441 D COG0477 Permeases of the major facilitator superfamily; fosmidomycin resistance protein 1720221..1721441 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471495.1 CDS CFSAN001992_08735 NC_020307.1 1721453 1721578 R hypothetical protein complement(1721453..1721578) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471496.1 CDS CFSAN001992_08740 NC_020307.1 1721656 1723332 D COG4651 Kef-type K+ transport system, predicted NAD-binding component; cation:proton antiport protein 1721656..1723332 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471497.1 CDS CFSAN001992_08745 NC_020307.1 1723381 1724685 R COG0524 Sugar kinases, ribokinase family; inosine/guanosine kinase complement(1723381..1724685) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471498.1 CDS CFSAN001992_08750 NC_020307.1 1724838 1725809 D COG0657 Esterase/lipase; acetyl esterase 1724838..1725809 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471499.1 CDS hemH NC_020307.1 1725806 1726768 R COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase complement(1725806..1726768) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471500.1 CDS adk NC_020307.1 1726953 1727597 R COG0563 Adenylate kinase and related kinases; adenylate kinase complement(1726953..1727597) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471501.1 CDS CFSAN001992_08765 NC_020307.1 1727514 1727735 D hypothetical protein 1727514..1727735 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471502.1 CDS CFSAN001992_08770 NC_020307.1 1727839 1729713 R COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 complement(1727839..1729713) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471503.1 CDS recR NC_020307.1 1729824 1730429 R COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR complement(1729824..1730429) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471504.1 CDS CFSAN001992_08780 NC_020307.1 1730429 1730758 R COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1730429..1730758) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471505.1 CDS CFSAN001992_08785 NC_020307.1 1730804 1732732 R COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau complement(1730804..1732732) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471506.1 CDS CFSAN001992_08790 NC_020307.1 1732846 1733397 R COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; adenine phosphoribosyltransferase complement(1732846..1733397) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471507.1 CDS CFSAN001992_08795 NC_020307.1 1733550 1733927 R COG2832 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1733550..1733927) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471508.1 CDS CFSAN001992_08800 NC_020307.1 1733996 1734523 D COG3923 Primosomal replication protein N''; primosomal replication protein N'' 1733996..1734523 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471509.1 CDS CFSAN001992_08805 NC_020307.1 1734537 1734704 D hypothetical protein 1734537..1734704 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471510.1 CDS CFSAN001992_08810 NC_020307.1 1734774 1735697 D COG5464 Uncharacterized conserved protein; hypothetical protein 1734774..1735697 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471511.1 CDS CFSAN001992_08815 NC_020307.1 1735739 1739101 R COG3264 Small-conductance mechanosensitive channel; hypothetical protein complement(1735739..1739101) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471512.1 CDS CFSAN001992_08820 NC_020307.1 1739220 1739873 R COG1309 Transcriptional regulator; DNA-binding transcriptional repressor AcrR complement(1739220..1739873) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471513.1 CDS CFSAN001992_08825 NC_020307.1 1740015 1741208 D COG0845 Membrane-fusion protein; multidrug efflux system transporter AcrA 1740015..1741208 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471514.1 CDS CFSAN001992_08840 NC_020307.1 1744874 1745248 D Hha toxicity attenuator 1744874..1745248 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471515.1 CDS CFSAN001992_08845 NC_020307.1 1745276 1745494 D modulator of gene expression, with H-NS protein 1745276..1745494 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471516.1 CDS CFSAN001992_08850 NC_020307.1 1745673 1746224 D COG0110 Acetyltransferase (isoleucine patch superfamily); maltose O-acetyltransferase 1745673..1746224 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471517.1 CDS CFSAN001992_08855 NC_020307.1 1746342 1746812 D Inner membrane protein ylaC 1746342..1746812 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471518.1 CDS rpmJ NC_020307.1 1746868 1747002 R COG0257 Ribosomal protein L36; 50S ribosomal protein L36 complement(1746868..1747002) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471519.1 CDS rpmE2 NC_020307.1 1747014 1747274 R COG0254 Ribosomal protein L31; 50S ribosomal protein L31 type B complement(1747014..1747274) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471520.1 CDS CFSAN001992_08870 NC_020307.1 1747499 1749049 D COG4943 Predicted signal transduction protein containing sensor and EAL domains; putative 58.9 kDa protein in tesb-hha intergenic region 1747499..1749049 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471521.1 CDS CFSAN001992_08875 NC_020307.1 1749280 1749669 D COG3695 Predicted methylated DNA-protein cysteine methyltransferase; methylated-DNA methyltransferase 1749280..1749669 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471522.1 CDS CFSAN001992_08880 NC_020307.1 1749702 1750271 R COG3126 Uncharacterized protein conserved in bacteria; lipoprotein complement(1749702..1750271) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471523.1 CDS CFSAN001992_08885 NC_020307.1 1750486 1751346 D COG1946 Acyl-CoA thioesterase; acyl-CoA thioesterase II 1750486..1751346 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471524.1 CDS CFSAN001992_08890 NC_020307.1 1751446 1752732 R COG0004 Ammonia permease; ammonium transporter complement(1751446..1752732) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471525.1 CDS CFSAN001992_08895 NC_020307.1 1752764 1753102 R COG0347 Nitrogen regulatory protein PII; nitrogen regulatory protein P-II 2 complement(1752764..1753102) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471526.1 CDS CFSAN001992_08900 NC_020307.1 1753315 1754940 R COG1132 ABC-type multidrug transport system, ATPase and permease components; multidrug ABC transporter ATP-binding protein complement(1753315..1754940) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471527.1 CDS CFSAN001992_08905 NC_020307.1 1755088 1756860 R COG1132 ABC-type multidrug transport system, ATPase and permease components; multidrug ABC transporter ATP-binding protein complement(1755088..1756860) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471528.1 CDS CFSAN001992_08910 NC_020307.1 1756901 1757359 R COG1522 Transcriptional regulators; transcriptional regulator complement(1756901..1757359) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471529.1 CDS CFSAN001992_08915 NC_020307.1 1757475 1758527 D COG0031 Cysteine synthase; pyridoxal-5'-phosphate-dependent enzyme, beta subunit 1757475..1758527 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471530.1 CDS CFSAN001992_08920 NC_020307.1 1758576 1759394 R COG0561 Predicted hydrolases of the HAD superfamily; thiamin pyrimidine pyrophosphate hydrolase complement(1758576..1759394) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471531.1 CDS CFSAN001992_08925 NC_020307.1 1759494 1761194 D COG4533 ABC-type uncharacterized transport system, periplasmic component; Oligopeptide ABC oligopeptide-binding OppA 1759494..1761194 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471532.1 CDS CFSAN001992_08930 NC_020307.1 1761259 1761954 D COG0603 Predicted PP-loop superfamily ATPase; queuosine biosynthesis protein QueC 1761259..1761954 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471533.1 CDS CFSAN001992_08935 NC_020307.1 1762061 1762459 R COG0824 Predicted thioesterase; thioesterase superfamily protein complement(1762061..1762459) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471534.1 CDS CFSAN001992_08940 NC_020307.1 1762563 1762937 R COG1555 DNA uptake protein and related DNA-binding proteins; competence protein ComEA complement(1762563..1762937) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471535.1 CDS CFSAN001992_08945 NC_020307.1 1763087 1764958 R COG0760 Parvulin-like peptidyl-prolyl isomerase; periplasmic folding chaperone complement(1763087..1764958) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471536.1 CDS CFSAN001992_08950 NC_020307.1 1765249 1765521 R COG0776 Bacterial nucleoid DNA-binding protein; transcriptional regulator HU subunit beta complement(1765249..1765521) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471537.1 CDS CFSAN001992_08955 NC_020307.1 1765730 1768084 R COG0466 ATP-dependent Lon protease, bacterial type; DNA-binding ATP-dependent protease La complement(1765730..1768084) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471538.1 CDS clpX NC_020307.1 1768270 1769541 R COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX complement(1768270..1769541) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471539.1 CDS CFSAN001992_08965 NC_020307.1 1769792 1770415 R COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit complement(1769792..1770415) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471540.1 CDS tig NC_020307.1 1770662 1771960 R COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor complement(1770662..1771960) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471541.1 CDS CFSAN001992_08975 NC_020307.1 1772307 1772624 R COG0271 Stress-induced morphogen (activity unknown); transcriptional regulator BolA complement(1772307..1772624) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471542.1 CDS CFSAN001992_08980 NC_020307.1 1772928 1773506 D COG3056 Uncharacterized lipoprotein; hypothetical protein 1772928..1773506 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471543.1 CDS ampG NC_020307.1 1773550 1775025 D COG0477 Permeases of the major facilitator superfamily; muropeptide transporter 1773550..1775025 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471544.1 CDS CFSAN001992_08990 NC_020307.1 1775478 1776434 D COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2; cytochrome o ubiquinol oxidase subunit II 1775478..1776434 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471545.1 CDS CFSAN001992_08995 NC_020307.1 1776445 1778436 D COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; cytochrome o ubiquinol oxidase subunit I 1776445..1778436 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471546.1 CDS CFSAN001992_09000 NC_020307.1 1778426 1779040 D COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3; cytochrome o ubiquinol oxidase subunit III 1778426..1779040 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471547.1 CDS CFSAN001992_09005 NC_020307.1 1779040 1779369 D COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4; cytochrome o ubiquinol oxidase subunit IV 1779040..1779369 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471548.1 CDS CFSAN001992_09010 NC_020307.1 1779381 1780271 D COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); protoheme IX farnesyltransferase 1779381..1780271 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471549.1 CDS CFSAN001992_09015 NC_020307.1 1780492 1781856 D COG0477 Permeases of the major facilitator superfamily; inner membrane transport protein yajR 1780492..1781856 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471550.1 CDS CFSAN001992_09020 NC_020307.1 1781903 1782394 R COG1666 Uncharacterized protein conserved in bacteria; nucleotide-binding protein complement(1781903..1782394) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471551.1 CDS CFSAN001992_09025 NC_020307.1 1782520 1783431 D COG1893 Ketopantoate reductase; 2-dehydropantoate 2-reductase 1782520..1783431 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471552.1 CDS CFSAN001992_09030 NC_020307.1 1783394 1783984 D COG0693 Putative intracellular protease/amidase; oxidative-stress-resistance chaperone 1783394..1783984 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471553.1 CDS CFSAN001992_09035 NC_020307.1 1784081 1784890 R COG0637 Predicted phosphatase/phosphohexomutase; phosphonoacetaldehyde hydrolase complement(1784081..1784890) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471554.1 CDS CFSAN001992_09040 NC_020307.1 1784900 1786003 R COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; 2-aminoethylphosphonate--pyruvate transaminase complement(1784900..1786003) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471555.1 CDS CFSAN001992_09045 NC_020307.1 1786143 1786862 D COG2188 Transcriptional regulators; transcriptional regulator protein 1786143..1786862 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471556.1 CDS CFSAN001992_09050 NC_020307.1 1787060 1788073 D COG1840 ABC-type Fe3+ transport system, periplasmic component; 2-aminoethylphosphonate ABC transporter substrate-binding protein 1787060..1788073 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471557.1 CDS CFSAN001992_09055 NC_020307.1 1788079 1789188 D COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; 2-aminoethylphosphonate ABC transporter ATP-binding protein 1788079..1789188 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471558.1 CDS CFSAN001992_09060 NC_020307.1 1789191 1790051 D COG0555 ABC-type sulfate transport system, permease component; 2-aminoethylphosphonate transport system permease PhnU 1789191..1790051 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471559.1 CDS CFSAN001992_09065 NC_020307.1 1790054 1790851 D COG1177 ABC-type spermidine/putrescine transport system, permease component II; 2-aminoethylphosphonate ABC transporter membrane component PhnV 1790054..1790851 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471560.1 CDS CFSAN001992_09070 NC_020307.1 1790895 1792343 R COG0301 Thiamine biosynthesis ATP pyrophosphatase; tRNA s(4)U8 sulfurtransferase complement(1790895..1792343) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471561.1 CDS CFSAN001992_09075 NC_020307.1 1792553 1792795 D COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 1792553..1792795 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471562.1 CDS CFSAN001992_09080 NC_020307.1 1792796 1793695 D COG0142 Geranylgeranyl pyrophosphate synthase; geranyltranstransferase 1792796..1793695 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471563.1 CDS CFSAN001992_09085 NC_020307.1 1793719 1795581 D COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 1793719..1795581 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471564.1 CDS CFSAN001992_09090 NC_020307.1 1795638 1796612 D COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); putative oxidoreductase 1795638..1796612 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471565.1 CDS CFSAN001992_09095 NC_020307.1 1796716 1797231 R COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidylglycerophosphatase A complement(1796716..1797231) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471566.1 CDS CFSAN001992_09100 NC_020307.1 1797209 1798186 R COG0611 Thiamine monophosphate kinase; thiamine monophosphate kinase complement(1797209..1798186) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471567.1 CDS nusB NC_020307.1 1798265 1798684 R COG0781 Transcription termination factor; transcription antitermination protein NusB complement(1798265..1798684) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471568.1 CDS ribH NC_020307.1 1798705 1799175 R COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase complement(1798705..1799175) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471569.1 CDS ribD NC_020307.1 1799264 1800367 R COG0117 Pyrimidine deaminase; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase complement(1799264..1800367) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471570.1 CDS nrdR NC_020307.1 1800371 1800820 R COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains; transcriptional regulator NrdR complement(1800371..1800820) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471571.1 CDS CFSAN001992_09125 NC_020307.1 1800972 1801511 D hypothetical protein 1800972..1801511 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471572.1 CDS CFSAN001992_09130 NC_020307.1 1801811 1802674 D COG3248 Nucleoside-binding outer membrane protein; nucleoside-specific channel-forming protein Tsx 1801811..1802674 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471573.1 CDS CFSAN001992_09135 NC_020307.1 1802758 1802865 R hypothetical protein complement(1802758..1802865) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471574.1 CDS CFSAN001992_09140 NC_020307.1 1803303 1803650 R COG1403 Restriction endonuclease; hypothetical protein complement(1803303..1803650) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471575.1 CDS secF NC_020307.1 1803744 1804715 R COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF complement(1803744..1804715) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471576.1 CDS secD NC_020307.1 1804726 1806573 R COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD complement(1804726..1806573) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471577.1 CDS yajC NC_020307.1 1806601 1806933 R COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC complement(1806601..1806933) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471578.1 CDS tgt NC_020307.1 1806956 1808083 R COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(1806956..1808083) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471579.1 CDS queA NC_020307.1 1808280 1809344 R COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(1808280..1809344) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471580.1 CDS CFSAN001992_09170 NC_020307.1 1809438 1810019 D COG3124 Uncharacterized protein conserved in bacteria; acyl carrier protein phosphodiesterase 1809438..1810019 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471581.1 CDS CFSAN001992_09175 NC_020307.1 1810229 1810831 D COG0450 Peroxiredoxin; peroxidase 1810229..1810831 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471582.1 CDS CFSAN001992_09180 NC_020307.1 1810903 1812720 R COG0366 Glycosidases; maltodextrin glucosidase complement(1810903..1812720) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471583.1 CDS proY NC_020307.1 1812882 1814252 R COG1113 Gamma-aminobutyrate permease and related permeases; proline-specific permease complement(1812882..1814252) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471584.1 CDS CFSAN001992_09190 NC_020307.1 1814327 1815646 R COG1114 Branched-chain amino acid permeases; branched-chain amino acid transport system 2 carrier protein BrnQ complement(1814327..1815646) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471585.1 CDS phoR NC_020307.1 1816055 1817350 R COG0642 Signal transduction histidine kinase; phosphate regulon sensor protein complement(1816055..1817350) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471586.1 CDS CFSAN001992_09200 NC_020307.1 1817420 1818109 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator PhoB complement(1817420..1818109) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471587.1 CDS CFSAN001992_09205 NC_020307.1 1818151 1818282 D hypothetical protein 1818151..1818282 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471588.1 CDS CFSAN001992_09210 NC_020307.1 1818324 1819526 D COG0420 DNA repair exonuclease; exonuclease subunit SbcD 1818324..1819526 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471589.1 CDS CFSAN001992_09215 NC_020307.1 1819523 1822663 D COG0419 ATPase involved in DNA repair; exonuclease subunit SbcC 1819523..1822663 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471590.1 CDS CFSAN001992_09220 NC_020307.1 1822836 1824008 D COG2814 Arabinose efflux permease; MFS transport protein AraJ 1822836..1824008 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471591.1 CDS CFSAN001992_09225 NC_020307.1 1823900 1824043 R hypothetical protein complement(1823900..1824043) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471592.1 CDS CFSAN001992_09230 NC_020307.1 1824028 1824936 R COG1940 Transcriptional regulator/sugar kinase; fructokinase complement(1824028..1824936) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471593.1 CDS rdgC NC_020307.1 1825062 1825973 D COG2974 DNA recombination-dependent growth factor C; recombination associated protein 1825062..1825973 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471594.1 CDS CFSAN001992_09240 NC_020307.1 1826011 1826295 R COG3123 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1826011..1826295) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471595.1 CDS CFSAN001992_09245 NC_020307.1 1826366 1827043 R hypothetical protein complement(1826366..1827043) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471596.1 CDS CFSAN001992_09250 NC_020307.1 1827294 1827485 R hypothetical protein complement(1827294..1827485) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471597.1 CDS aroL NC_020307.1 1827512 1828057 R COG0703 Shikimate kinase; shikimate kinase II complement(1827512..1828057) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471598.1 CDS CFSAN001992_09260 NC_020307.1 1828242 1828697 R COG1671 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1828242..1828697) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471599.1 CDS CFSAN001992_09265 NC_020307.1 1828837 1829646 D COG0345 Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1828837..1829646 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471600.1 CDS adrA NC_020307.1 1829661 1830773 R COG2199 FOG: GGDEF domain; diguanylate cyclase AdrA complement(1829661..1830773) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471601.1 CDS CFSAN001992_09275 NC_020307.1 1830865 1831185 R hypothetical protein complement(1830865..1831185) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471602.1 CDS CFSAN001992_09280 NC_020307.1 1831538 1831798 R anti-RssB factor complement(1831538..1831798) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471603.1 CDS CFSAN001992_09285 NC_020307.1 1832095 1833306 R COG0477 Permeases of the major facilitator superfamily; Multidrug resistance protein mdtG complement(1832095..1833306) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471604.1 CDS CFSAN001992_09290 NC_020307.1 1833475 1834188 R COG3921 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1833475..1834188) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471605.1 CDS ddl NC_020307.1 1834266 1835360 D COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanyl-alanine synthetase A 1834266..1835360 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471606.1 CDS CFSAN001992_09300 NC_020307.1 1835386 1835601 R hypothetical protein complement(1835386..1835601) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471607.1 CDS CFSAN001992_09305 NC_020307.1 1835869 1836177 D Inner membrane protein yaiY 1835869..1836177 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471608.1 CDS CFSAN001992_09310 NC_020307.1 1836215 1837309 R COG1201 Lhr-like helicases; lipoprotein complement(1836215..1837309) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471609.1 CDS CFSAN001992_09315 NC_020307.1 1837324 1838544 R COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components; microcin B17 transporter complement(1837324..1838544) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471610.1 CDS CFSAN001992_09320 NC_020307.1 1838891 1840048 D COG1680 Beta-lactamase class C and other penicillin binding proteins; beta-lactam binding protein AmpH 1838891..1840048 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471611.1 CDS CFSAN001992_09325 NC_020307.1 1840093 1840716 R DNA-binding transcriptional regulator complement(1840093..1840716) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471612.1 CDS CFSAN001992_09330 NC_020307.1 1840802 1843774 R COG3468 Type V secretory pathway, adhesin AidA; putative autotransporter complement(1840802..1843774) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471613.1 CDS CFSAN001992_09335 NC_020307.1 1844287 1845261 D COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase 1844287..1845261 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471614.1 CDS prpE NC_020307.1 1845364 1847250 R COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; propionyl-CoA synthetase complement(1845364..1847250) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471615.1 CDS prpD NC_020307.1 1847291 1848742 R COG2079 Uncharacterized protein involved in propionate catabolism; 2-methylcitrate dehydratase complement(1847291..1848742) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471616.1 CDS CFSAN001992_09350 NC_020307.1 1848782 1849951 R COG0372 Citrate synthase; methylcitrate synthase complement(1848782..1849951) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471617.1 CDS prpB NC_020307.1 1850062 1850949 R COG2513 PEP phosphonomutase and related enzymes; 2-methylisocitrate lyase complement(1850062..1850949) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471618.1 CDS CFSAN001992_09360 NC_020307.1 1851215 1852840 D COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; propionate catabolism operon regulatory protein PrpR 1851215..1852840 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471619.1 CDS CFSAN001992_09365 NC_020307.1 1852976 1853251 R hypothetical protein complement(1852976..1853251) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471620.1 CDS CFSAN001992_09370 NC_020307.1 1853483 1854115 D COG1280 Putative threonine efflux protein; Threonine efflux protein 1853483..1854115 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471621.1 CDS CFSAN001992_09375 NC_020307.1 1854156 1856246 R COG1629 Outer membrane receptor proteins, mostly Fe transport; ferrichrome-iron receptor complement(1854156..1856246) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471622.1 CDS CFSAN001992_09380 NC_020307.1 1856410 1857414 R COG2207 AraC-type DNA-binding domain-containing proteins; HTH-type transcriptional activator rhaS L-rhamnose operon regulatory protein rhaS complement(1856410..1857414) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471623.1 CDS CFSAN001992_09385 NC_020307.1 1857621 1857752 R hypothetical protein complement(1857621..1857752) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471624.1 CDS CFSAN001992_09390 NC_020307.1 1857752 1858762 R COG1294 Cytochrome bd-type quinol oxidase, subunit 2; terminal oxidase subunit II complement(1857752..1858762) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471625.1 CDS CFSAN001992_09395 NC_020307.1 1858759 1860162 R COG1271 Cytochrome bd-type quinol oxidase, subunit 1; putative terminal oxidase subunit I complement(1858759..1860162) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471626.1 CDS CFSAN001992_09400 NC_020307.1 1860657 1863626 R COG3587 Restriction endonuclease; type III restriction-modification system StyLTI enzyme res complement(1860657..1863626) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471627.1 CDS CFSAN001992_09405 NC_020307.1 1863639 1865597 R COG2189 Adenine specific DNA methylase Mod; type III restriction-modification system enzyme (StyLTI) modification methylase complement(1863639..1865597) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471628.1 CDS CFSAN001992_09410 NC_020307.1 1865786 1867039 R COG0477 Permeases of the major facilitator superfamily; putative sialic acid transporter complement(1865786..1867039) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471629.1 CDS CFSAN001992_09415 NC_020307.1 1867331 1867525 R COG2608 Copper chaperone; putative copper chaperone complement(1867331..1867525) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471630.1 CDS CFSAN001992_09420 NC_020307.1 1867603 1868067 R COG0789 Predicted transcriptional regulators; MerR family transcriptional regulator complement(1867603..1868067) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471631.1 CDS CFSAN001992_09425 NC_020307.1 1868079 1870367 R COG2217 Cation transport ATPase; copper-translocating P-type ATPase complement(1868079..1870367) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471632.1 CDS CFSAN001992_09430 NC_020307.1 1870644 1871870 D COG0845 Membrane-fusion protein; Multidrug resistance protein mdtA Multidrug transporter mdtA , Flags: Precursor 1870644..1871870 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471633.1 CDS CFSAN001992_09435 NC_020307.1 1871867 1875034 D COG0841 Cation/multidrug efflux pump; putative cation efflux protein 1871867..1875034 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471634.1 CDS CFSAN001992_09440 NC_020307.1 1875051 1876508 D COG1538 Outer membrane protein; Outer membrane protein oprM Flags: Precursor 1875051..1876508 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471635.1 CDS CFSAN001992_09445 NC_020307.1 1876576 1876935 R cytochrome c type biogenesis protein CycH complement(1876576..1876935) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471636.1 CDS CFSAN001992_09450 NC_020307.1 1876993 1877217 R hypothetical protein complement(1876993..1877217) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471637.1 CDS CFSAN001992_09455 NC_020307.1 1877228 1877869 R COG4566 Response regulator; response regulator complement(1877228..1877869) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471638.1 CDS CFSAN001992_09460 NC_020307.1 1878013 1878537 R COG1629 Outer membrane receptor proteins, mostly Fe transport; Attachment invasion locus protein Flags: Precursor complement(1878013..1878537) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471639.1 CDS CFSAN001992_09465 NC_020307.1 1878939 1879427 R hypothetical protein complement(1878939..1879427) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471640.1 CDS CFSAN001992_09470 NC_020307.1 1879400 1880143 R COG3710 DNA-binding winged-HTH domains; response regulator complement(1879400..1880143) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471641.1 CDS CFSAN001992_09475 NC_020307.1 1880243 1881793 R COG4943 Predicted signal transduction protein containing sensor and EAL domains; cyclic diguanylate phosphodiesterase (EAL) domain-containing protein complement(1880243..1881793) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471642.1 CDS CFSAN001992_09480 NC_020307.1 1882119 1882619 R periplasmic protein complement(1882119..1882619) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471643.1 CDS CFSAN001992_09485 NC_020307.1 1882592 1883326 R transmembrane regulator complement(1882592..1883326) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471644.1 CDS CFSAN001992_09490 NC_020307.1 1883989 1884525 D COG3539 P pilus assembly protein, pilin FimA; Fimbrial protein precursor 1883989..1884525 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471645.1 CDS CFSAN001992_09495 NC_020307.1 1884587 1885348 D COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone protein StbB 1884587..1885348 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471646.1 CDS CFSAN001992_09500 NC_020307.1 1885332 1887893 D COG3188 P pilus assembly protein, porin PapC; fimbrial outer membrane usher protein StbC 1885332..1887893 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471647.1 CDS CFSAN001992_09505 NC_020307.1 1887898 1889223 D fimbrial usher protein StbD 1887898..1889223 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471648.1 CDS CFSAN001992_09510 NC_020307.1 1889189 1889947 D COG3121 P pilus assembly protein, chaperone PapD; fimbrial assembly chaperone StbE 1889189..1889947 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471649.1 CDS CFSAN001992_09515 NC_020307.1 1889995 1890393 R putative outer membrane protein complement(1889995..1890393) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471650.1 CDS CFSAN001992_09520 NC_020307.1 1890818 1890970 R COG1961 Site-specific recombinases, DNA invertase Pin homologs; inversion of adjacent DNA complement(1890818..1890970) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471651.1 CDS CFSAN001992_09525 NC_020307.1 1891184 1891906 D type III secretion protein SopE 1891184..1891906 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471652.1 CDS CFSAN001992_09530 NC_020307.1 1892105 1892512 R Fels-2 prophage Tfa complement(1892105..1892512) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471653.1 CDS CFSAN001992_09535 NC_020307.1 1892519 1893094 R phage tail fiber protein complement(1892519..1893094) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471654.1 CDS CFSAN001992_09540 NC_020307.1 1893222 1893443 D hypothetical protein 1893222..1893443 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471655.1 CDS CFSAN001992_09545 NC_020307.1 1893433 1893675 D hypothetical protein 1893433..1893675 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471656.1 CDS CFSAN001992_09550 NC_020307.1 1893659 1893928 D putative phage related protein 1893659..1893928 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471657.1 CDS CFSAN001992_09555 NC_020307.1 1893931 1894644 R hypothetical protein complement(1893931..1894644) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471658.1 CDS CFSAN001992_09560 NC_020307.1 1894683 1896074 D COG0553 Superfamily II DNA/RNA helicases, SNF2 family; phage-related DNA helicase 1894683..1896074 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471659.1 CDS CFSAN001992_09565 NC_020307.1 1896071 1896259 D COG3311 Predicted transcriptional regulator; DNA-binding protein 1896071..1896259 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471660.1 CDS CFSAN001992_09570 NC_020307.1 1896266 1896733 R hypothetical protein complement(1896266..1896733) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471661.1 CDS CFSAN001992_09575 NC_020307.1 1896734 1897906 R COG0582 Integrase; prophage CPS-53 integrase complement(1896734..1897906) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471662.1 CDS proA NC_020307.1 1898251 1899501 R COG0014 Gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase complement(1898251..1899501) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471663.1 CDS CFSAN001992_09585 NC_020307.1 1899513 1900616 R COG0263 Glutamate 5-kinase; gamma-glutamyl kinase complement(1899513..1900616) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471664.1 CDS CFSAN001992_09590 NC_020307.1 1900899 1901951 D COG3203 Outer membrane protein (porin); outer membrane phosphoporin protein E 1900899..1901951 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471665.1 CDS CFSAN001992_09595 NC_020307.1 1902002 1902403 R DNA-binding transcriptional regulator Crl complement(1902002..1902403) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471666.1 CDS frsA NC_020307.1 1902461 1903705 R COG1073 Hydrolases of the alpha/beta superfamily; fermentation/respiration switch protein complement(1902461..1903705) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471667.1 CDS CFSAN001992_09605 NC_020307.1 1903794 1904252 R COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; xanthine-guanine phosphoribosyltransferase complement(1903794..1904252) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471668.1 CDS CFSAN001992_09610 NC_020307.1 1904501 1905958 D COG2195 Di- and tripeptidases; aminoacyl-histidine dipeptidase 1904501..1905958 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471669.1 CDS prfH NC_020307.1 1906114 1906728 R COG1186 Protein chain release factor B; peptide chain release factor-like protein complement(1906114..1906728) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471670.1 CDS CFSAN001992_09620 NC_020307.1 1906725 1907864 R COG1690 Uncharacterized conserved protein; hypothetical protein complement(1906725..1907864) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471671.1 CDS CFSAN001992_09625 NC_020307.1 1908083 1909138 R COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA polymerase IV complement(1908083..1909138) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471672.1 CDS CFSAN001992_09630 NC_020307.1 1909388 1910128 D COG3034 Uncharacterized protein conserved in bacteria; hypothetical protein 1909388..1910128 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471673.1 CDS CFSAN001992_09635 NC_020307.1 1910099 1910866 R COG0121 Predicted glutamine amidotransferase; Glucosamine-fructose-6-phosphate aminotransferase complement(1910099..1910866) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471674.1 CDS gmhA NC_020307.1 1911079 1911657 R COG0279 Phosphoheptose isomerase; phosphoheptose isomerase complement(1911079..1911657) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471675.1 CDS fadE NC_020307.1 1911897 1914341 D COG1960 Acyl-CoA dehydrogenases; acyl-CoA dehydrogenase 1911897..1914341 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471676.1 CDS CFSAN001992_09650 NC_020307.1 1914450 1915217 D COG0388 Predicted amidohydrolase; C-N hydrolase family amidase 1914450..1915217 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471677.1 CDS CFSAN001992_09655 NC_020307.1 1915527 1915934 D COG0732 Restriction endonuclease S subunits; putative secreted protein 1915527..1915934 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471678.1 CDS CFSAN001992_09660 NC_020307.1 1916265 1916984 D COG3637 Opacity protein and related surface antigens; adhesin/invasin protein PagN 1916265..1916984 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471679.1 CDS CFSAN001992_09665 NC_020307.1 1917411 1917569 R hypothetical protein complement(1917411..1917569) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471680.1 CDS CFSAN001992_09670 NC_020307.1 1917947 1918564 R TioA protein complement(1917947..1918564) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471681.1 CDS CFSAN001992_09675 NC_020307.1 1918704 1919159 R COG1522 Transcriptional regulators; transcriptional regulator complement(1918704..1919159) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471682.1 CDS CFSAN001992_09680 NC_020307.1 1919397 1920236 D COG3515 Uncharacterized protein conserved in bacteria; ImpA-related N- family protein 1919397..1920236 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471683.1 CDS CFSAN001992_09685 NC_020307.1 1920766 1921497 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon complement(1920766..1921497) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471684.1 CDS rnhA NC_020307.1 1921561 1922028 D COG0328 Ribonuclease HI; ribonuclease H 1921561..1922028 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471685.1 CDS CFSAN001992_09695 NC_020307.1 1922025 1922747 R COG0500 SAM-dependent methyltransferases; hypothetical protein complement(1922025..1922747) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471686.1 CDS CFSAN001992_09700 NC_020307.1 1922782 1923537 D COG0491 Zn-dependent hydrolases, including glyoxylases; hydroxyacylglutathione hydrolase 1922782..1923537 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471687.1 CDS mltD NC_020307.1 1923609 1924976 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); membrane-bound lytic murein transglycosylase D 1923609..1924976 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471688.1 CDS CFSAN001992_09710 NC_020307.1 1925032 1925802 R COG0500 SAM-dependent methyltransferases; methyltransferase, UbiE/COQ5 family protein complement(1925032..1925802) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471689.1 CDS CFSAN001992_09715 NC_020307.1 1925880 1926680 R COG3021 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1925880..1926680) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471690.1 CDS CFSAN001992_09720 NC_020307.1 1926812 1927987 R COG2814 Arabinose efflux permease; inner membrane transport protein YdhP complement(1926812..1927987) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471691.1 CDS CFSAN001992_09725 NC_020307.1 1928092 1929006 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 1928092..1929006 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471692.1 CDS dkgB NC_020307.1 1929028 1929831 R COG0656 Aldo/keto reductases, related to diketogulonate reductase; 2,5-diketo-D-gluconate reductase B complement(1929028..1929831) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471693.1 CDS CFSAN001992_09735 NC_020307.1 1935777 1936343 R COG0241 Histidinol phosphatase and related phosphatases; D,D-heptose 1,7-bisphosphate phosphatase complement(1935777..1936343) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471694.1 CDS metN NC_020307.1 1936533 1937564 D COG1135 ABC-type metal ion transport system, ATPase component; DL-methionine transporter ATP-binding subunit 1936533..1937564 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471695.1 CDS CFSAN001992_09745 NC_020307.1 1937557 1938210 D COG2011 ABC-type metal ion transport system, permease component; DL-methionine transporter permease subunit 1937557..1938210 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471696.1 CDS metQ NC_020307.1 1938249 1939064 D COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; DL-methionine transporter substrate-binding subunit 1938249..1939064 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471697.1 CDS rcsF NC_020307.1 1939183 1939587 D outer membrane lipoprotein 1939183..1939587 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471698.1 CDS CFSAN001992_09760 NC_020307.1 1939584 1940291 D COG1720 Uncharacterized conserved protein; hypothetical protein 1939584..1940291 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471699.1 CDS CFSAN001992_09765 NC_020307.1 1940402 1942120 D COG0442 Prolyl-tRNA synthetase; prolyl-tRNA ligase 1940402..1942120 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471700.1 CDS CFSAN001992_09770 NC_020307.1 1942194 1942895 R COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance; lipoprotein involved with copper homeostasis and adhesion complement(1942194..1942895) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471701.1 CDS CFSAN001992_09775 NC_020307.1 1942927 1943349 R COG1186 Protein chain release factor B; hypothetical protein complement(1942927..1943349) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471702.1 CDS CFSAN001992_09780 NC_020307.1 1943346 1943891 R COG4681 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1943346..1943891) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471703.1 CDS CFSAN001992_09785 NC_020307.1 1944089 1944289 D hypothetical protein 1944089..1944289 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471704.1 CDS CFSAN001992_09790 NC_020307.1 1944276 1944536 D COG4568 Transcriptional antiterminator; Rho-binding antiterminator 1944276..1944536 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471705.1 CDS tilS NC_020307.1 1944620 1945912 R COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine ligase complement(1944620..1945912) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471706.1 CDS CFSAN001992_09800 NC_020307.1 1945975 1946364 R COG0346 Lactoylglutathione lyase and related lyases; lyase complement(1945975..1946364) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471707.1 CDS CFSAN001992_09805 NC_020307.1 1946420 1948561 R COG1982 Arginine/lysine/ornithine decarboxylases; lysine decarboxylase LdcC complement(1946420..1948561) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471708.1 CDS CFSAN001992_09810 NC_020307.1 1948637 1950400 R COG3979 Uncharacterized protein contain chitin-binding domain type 3; Basic 30 kDa endochitinase Flags: Precursor complement(1948637..1950400) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471709.1 CDS CFSAN001992_09815 NC_020307.1 1950580 1951539 R COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(1950580..1951539) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471710.1 CDS dnaE NC_020307.1 1951552 1955034 R COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha complement(1951552..1955034) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471711.1 CDS rnhB NC_020307.1 1955058 1955654 R COG0164 Ribonuclease HII; ribonuclease HII complement(1955058..1955654) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471712.1 CDS lpxB NC_020307.1 1955651 1956799 R COG0763 Lipid A disaccharide synthetase; lipid-A-disaccharide synthase complement(1955651..1956799) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471713.1 CDS CFSAN001992_09835 NC_020307.1 1956799 1957587 R COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase complement(1956799..1957587) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471714.1 CDS fabZ NC_020307.1 1957591 1958046 R COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase complement(1957591..1958046) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471715.1 CDS lpxD NC_020307.1 1958152 1959177 R COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(1958152..1959177) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471716.1 CDS CFSAN001992_09850 NC_020307.1 1959181 1959666 R COG2825 Outer membrane protein; periplasmic chaperone complement(1959181..1959666) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471717.1 CDS CFSAN001992_09855 NC_020307.1 1959789 1962221 R COG4775 Outer membrane protein/protective antigen OMA87; outer membrane protein assembly factor YaeT complement(1959789..1962221) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471718.1 CDS CFSAN001992_09860 NC_020307.1 1962253 1963605 R COG0750 Predicted membrane-associated Zn-dependent proteases 1; zinc metallopeptidase RseP complement(1962253..1963605) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471719.1 CDS cdsA NC_020307.1 1963617 1964474 R COG0575 CDP-diglyceride synthetase; CDP-diglyceride synthase complement(1963617..1964474) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471720.1 CDS CFSAN001992_09880 NC_020307.1 1965556 1966752 R COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(1965556..1966752) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471721.1 CDS frr NC_020307.1 1966894 1967451 R COG0233 Ribosome recycling factor; ribosome recycling factor complement(1966894..1967451) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471722.1 CDS pyrH NC_020307.1 1967598 1968323 R COG0528 Uridylate kinase; uridylate kinase complement(1967598..1968323) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471723.1 CDS tsf NC_020307.1 1968468 1969319 R COG0264 Translation elongation factor Ts; elongation factor Ts complement(1968468..1969319) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471724.1 CDS rpsB NC_020307.1 1969577 1970302 R COG0052 Ribosomal protein S2; 30S ribosomal protein S2 complement(1969577..1970302) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471725.1 CDS CFSAN001992_09905 NC_020307.1 1970753 1971547 D COG0024 Methionine aminopeptidase; methionine aminopeptidase 1970753..1971547 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471726.1 CDS CFSAN001992_09910 NC_020307.1 1971785 1974457 D COG2844 UTP:GlnB (protein PII) uridylyltransferase; PII uridylyl-transferase 1971785..1974457 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471727.1 CDS dapD NC_020307.1 1974487 1975311 D COG2171 Tetrahydrodipicolinate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1974487..1975311 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471728.1 CDS CFSAN001992_09920 NC_020307.1 1975348 1976649 R COG0477 Permeases of the major facilitator superfamily; shikimate transporter complement(1975348..1976649) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471729.1 CDS CFSAN001992_09925 NC_020307.1 1976896 1977282 D hypothetical protein 1976896..1977282 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471730.1 CDS CFSAN001992_09940 NC_020307.1 1980560 1981717 R COG3835 Sugar diacid utilization regulator; carbohydrate diacid transcriptional activator CdaR complement(1980560..1981717) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471731.1 CDS CFSAN001992_09945 NC_020307.1 1981870 1983297 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine endoprotease complement(1981870..1983297) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471732.1 CDS dgt NC_020307.1 1983427 1984944 R COG0232 dGTP triphosphohydrolase; deoxyguanosinetriphosphate triphosphohydrolase complement(1983427..1984944) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471733.1 CDS CFSAN001992_09955 NC_020307.1 1985029 1985727 D COG0775 Nucleoside phosphorylase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1985029..1985727 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471734.1 CDS CFSAN001992_09960 NC_020307.1 1985720 1986520 D COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; vitamin B12-transporter protein BtuF 1985720..1986520 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471735.1 CDS CFSAN001992_09965 NC_020307.1 1986557 1987180 D COG2860 Predicted membrane protein; hypothetical protein 1986557..1987180 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471736.1 CDS CFSAN001992_09970 NC_020307.1 1987281 1987625 R COG0316 Uncharacterized conserved protein; iron-sulfur cluster insertion protein ErpA complement(1987281..1987625) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471737.1 CDS CFSAN001992_09975 NC_020307.1 1987707 1989128 R COG0038 Chloride channel protein EriC; chloride channel protein complement(1987707..1989128) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471738.1 CDS CFSAN001992_09980 NC_020307.1 1989298 1990578 D COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 1989298..1990578 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471739.1 CDS CFSAN001992_09985 NC_020307.1 1990663 1992720 R COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron-hydroxamate transporter permease subunit complement(1990663..1992720) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471740.1 CDS CFSAN001992_09990 NC_020307.1 1992717 1993607 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron-hydroxamate transporter substrate-binding subunit complement(1992717..1993607) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471741.1 CDS CFSAN001992_09995 NC_020307.1 1993607 1994404 R COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron-hydroxamate transporter ATP-binding subunit complement(1993607..1994404) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471742.1 CDS CFSAN001992_10000 NC_020307.1 1994453 1995454 R COG1629 Outer membrane receptor proteins, mostly Fe transport; ferrichrome outer membrane transporter complement(1994453..1995454) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471743.1 CDS CFSAN001992_10005 NC_020307.1 1995523 1996641 R COG1629 Outer membrane receptor proteins, mostly Fe transport; ferrichrome outer membrane transporter complement(1995523..1996641) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471744.1 CDS mrcB NC_020307.1 1996933 1999452 R COG0744 Membrane carboxypeptidase (penicillin-binding protein); bifunctional glycosyl transferase/transpeptidase complement(1996933..1999452) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471745.1 CDS CFSAN001992_10015 NC_020307.1 1999593 2002022 R COG1643 HrpA-like helicases; ATP-dependent RNA helicase HrpB complement(1999593..2002022) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471746.1 CDS CFSAN001992_10020 NC_020307.1 2002095 2002625 D COG1514 2'-5' RNA ligase; 2'-5' RNA ligase 2002095..2002625 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471747.1 CDS CFSAN001992_10025 NC_020307.1 2002642 2003346 D COG1489 DNA-binding protein, stimulates sugar fermentation; DNA-binding transcriptional regulator 2002642..2003346 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471748.1 CDS dksA NC_020307.1 2003523 2003978 D COG1734 DnaK suppressor protein; RNA polymerase-binding transcription factor 2003523..2003978 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471749.1 CDS CFSAN001992_10035 NC_020307.1 2004047 2004943 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-Q tRNA(Asp) ligase 2004047..2004943 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471750.1 CDS pcnB NC_020307.1 2005084 2006502 D COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; poly(A) polymerase I 2005084..2006502 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471751.1 CDS CFSAN001992_10045 NC_020307.1 2006499 2006978 D COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase 2006499..2006978 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471752.1 CDS CFSAN001992_10050 NC_020307.1 2007381 2007974 D COG3539 P pilus assembly protein, pilin FimA; fimbrial protein StaA 2007381..2007974 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471753.1 CDS CFSAN001992_10055 NC_020307.1 2008240 2008977 D COG3121 P pilus assembly protein, chaperone PapD; chaperone protein EcpD 2008240..2008977 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471754.1 CDS CFSAN001992_10060 NC_020307.1 2009037 2011643 D COG3188 P pilus assembly protein, porin PapC; fimbrial outer membrane usher protein 2009037..2011643 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471755.1 CDS CFSAN001992_10065 NC_020307.1 2011630 2012196 D fimbrial protein StaD 2011630..2012196 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471756.1 CDS CFSAN001992_10070 NC_020307.1 2012211 2012819 D fimbrial protein StaE 2012211..2012819 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471757.1 CDS CFSAN001992_10075 NC_020307.1 2012852 2013415 D fimbrial protein StaF 2012852..2013415 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471758.1 CDS CFSAN001992_10080 NC_020307.1 2013779 2014705 D fimbrial-like adhesin protein 2013779..2014705 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471759.1 CDS panB NC_020307.1 2014827 2015621 D COG0413 Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2014827..2015621 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471760.1 CDS panC NC_020307.1 2015747 2016601 D COG0414 Panthothenate synthetase; pantoate--beta-alanine ligase 2015747..2016601 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471761.1 CDS CFSAN001992_10095 NC_020307.1 2016696 2017076 D COG0853 Aspartate 1-decarboxylase; aspartate alpha-decarboxylase 2016696..2017076 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471762.1 CDS CFSAN001992_10100 NC_020307.1 2017083 2018306 R COG0726 Predicted xylanase/chitin deacetylase; polysaccharide deacetylase complement(2017083..2018306) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471763.1 CDS CFSAN001992_10105 NC_020307.1 2018374 2018814 R COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; PTS system, IIA component complement(2018374..2018814) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471764.1 CDS CFSAN001992_10110 NC_020307.1 2019180 2019731 D COG3539 P pilus assembly protein, pilin FimA; fimbrial protein StiA 2019180..2019731 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471765.1 CDS CFSAN001992_10115 NC_020307.1 2019779 2020462 D COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone protein StiB 2019779..2020462 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471766.1 CDS CFSAN001992_10120 NC_020307.1 2020489 2023035 D COG3188 P pilus assembly protein, porin PapC; fimbrial outer membrane usher protein StiC 2020489..2023035 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471767.1 CDS CFSAN001992_10125 NC_020307.1 2023044 2024120 D fimbrial protein StiH 2023044..2024120 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471768.1 CDS CFSAN001992_10130 NC_020307.1 2024238 2025008 R COG0842 ABC-type multidrug transport system, permease component; inner membrane transport permease complement(2024238..2025008) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471769.1 CDS CFSAN001992_10135 NC_020307.1 2025005 2025931 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(2025005..2025931) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471770.1 CDS CFSAN001992_10140 NC_020307.1 2026040 2026702 D COG0288 Carbonic anhydrase; carbonic anhydrase 2026040..2026702 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471771.1 CDS CFSAN001992_10145 NC_020307.1 2026760 2027296 R COG0634 Hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(2026760..2027296) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471772.1 CDS CFSAN001992_10150 NC_020307.1 2027502 2029892 D COG4993 Glucose dehydrogenase; glucose dehydrogenase 2027502..2029892 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471773.1 CDS CFSAN001992_10155 NC_020307.1 2029970 2031580 R COG2132 Putative multicopper oxidases; multicopper oxidase complement(2029970..2031580) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471774.1 CDS CFSAN001992_10160 NC_020307.1 2031782 2032129 D hypothetical protein 2031782..2032129 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471775.1 CDS CFSAN001992_10165 NC_020307.1 2032236 2033096 D COG0421 Spermidine synthase; spermidine synthase 2032236..2033096 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471776.1 CDS CFSAN001992_10170 NC_020307.1 2033117 2033911 D COG1586 S-adenosylmethionine decarboxylase; S-adenosylmethionine decarboxylase 2033117..2033911 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471777.1 CDS CFSAN001992_10175 NC_020307.1 2033941 2034708 R COG1349 Transcriptional regulators of sugar metabolism; putative HTH-type transcriptional regulator ygbI complement(2033941..2034708) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471778.1 CDS pdxA NC_020307.1 2034718 2035701 R COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase 2 complement(2034718..2035701) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471779.1 CDS CFSAN001992_10185 NC_020307.1 2035691 2036962 R COG3395 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2035691..2036962) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471780.1 CDS CFSAN001992_10190 NC_020307.1 2036959 2037912 R 2-keto-3-deoxygluconate permease complement(2036959..2037912) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471781.1 CDS CFSAN001992_10195 NC_020307.1 2038146 2038508 R COG3112 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2038146..2038508) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471782.1 CDS CFSAN001992_10200 NC_020307.1 2038697 2041294 R COG1049 Aconitase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(2038697..2041294) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471783.1 CDS CFSAN001992_10205 NC_020307.1 2041683 2043305 D hypothetical protein 2041683..2043305 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471784.1 CDS CFSAN001992_10210 NC_020307.1 2043318 2044109 D secreted protein 2043318..2044109 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471785.1 CDS CFSAN001992_10215 NC_020307.1 2044147 2044431 R putative secreted protein complement(2044147..2044431) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471786.1 CDS CFSAN001992_10220 NC_020307.1 2044720 2046144 R COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; dihydrolipoamide dehydrogenase complement(2044720..2046144) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471787.1 CDS aceF NC_020307.1 2046346 2048235 R COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; pyruvate dehydrogenase dihydrolipoyltransacetylase complement(2046346..2048235) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471788.1 CDS aceE NC_020307.1 2048250 2050913 R COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component; pyruvate dehydrogenase subunit E1 complement(2048250..2050913) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471789.1 CDS CFSAN001992_10235 NC_020307.1 2050933 2051169 R hypothetical protein complement(2050933..2051169) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471790.1 CDS pdhR NC_020307.1 2051220 2051984 R COG2186 Transcriptional regulators; transcriptional regulator PdhR complement(2051220..2051984) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471791.1 CDS CFSAN001992_10245 NC_020307.1 2052550 2053920 D COG1113 Gamma-aminobutyrate permease and related permeases; aromatic amino acid transporter 2052550..2053920 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471792.1 CDS CFSAN001992_10250 NC_020307.1 2054084 2055490 D COG2211 Na+/melibiose symporter and related transporters; Major facilitator superfamily domain-containing protein 2-B 2054084..2055490 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471793.1 CDS CFSAN001992_10255 NC_020307.1 2055490 2056440 D COG3940 Predicted beta-xylosidase; alpha-N-arabinofuranosidase 2055490..2056440 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471794.1 CDS CFSAN001992_10260 NC_020307.1 2056532 2057386 R COG3725 Membrane protein required for beta-lactamase induction; regulatory protein AmpE complement(2056532..2057386) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471795.1 CDS CFSAN001992_10265 NC_020307.1 2057383 2057946 R COG3023 Negative regulator of beta-lactamase expression; N-acetyl-anhydromuranmyl-L-alanine amidase complement(2057383..2057946) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471796.1 CDS CFSAN001992_10270 NC_020307.1 2058034 2058927 D COG0157 Nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase 2058034..2058927 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471797.1 CDS CFSAN001992_10275 NC_020307.1 2059149 2059586 D COG4969 Tfp pilus assembly protein, major pilin PilA; major pilin subunit 2059149..2059586 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471798.1 CDS CFSAN001992_10280 NC_020307.1 2059596 2060981 D COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; hypothetical protein 2059596..2060981 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471799.1 CDS CFSAN001992_10285 NC_020307.1 2060971 2062173 D COG1459 Type II secretory pathway, component PulF; type IV pilin biogenesis protein 2060971..2062173 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471800.1 CDS CFSAN001992_10290 NC_020307.1 2062204 2063247 R COG0516 IMP dehydrogenase/GMP reductase; guanosine 5'-monophosphate oxidoreductase complement(2062204..2063247) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471801.1 CDS coaE NC_020307.1 2063473 2064093 D COG0237 Dephospho-CoA kinase; dephospho-CoA kinase 2063473..2064093 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471802.1 CDS CFSAN001992_10300 NC_020307.1 2064093 2064836 D COG4582 Uncharacterized protein conserved in bacteria; hypothetical protein 2064093..2064836 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471803.1 CDS CFSAN001992_10305 NC_020307.1 2064846 2065037 D COG3024 Uncharacterized protein conserved in bacteria; DNA gyrase inhibitor 2064846..2065037 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471804.1 CDS CFSAN001992_10310 NC_020307.1 2065034 2065138 R COG0583 Transcriptional regulator; putative HTH-type transcriptional regulator ycaN complement(2065034..2065138) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471805.1 CDS CFSAN001992_10315 NC_020307.1 2065115 2065318 D COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); hypothetical protein 2065115..2065318 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471806.1 CDS CFSAN001992_10320 NC_020307.1 2065352 2065747 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; nucleoside triphosphate pyrophosphohydrolase complement(2065352..2065747) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471807.1 CDS CFSAN001992_10325 NC_020307.1 2065899 2068604 R COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA complement(2065899..2068604) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471808.1 CDS CFSAN001992_10330 NC_020307.1 2068666 2069163 R SecA regulator SecM complement(2068666..2069163) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471809.1 CDS lpxC NC_020307.1 2069442 2070359 R COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(2069442..2070359) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471810.1 CDS CFSAN001992_10340 NC_020307.1 2070460 2071611 R COG0206 Cell division GTPase; cell division protein FtsZ complement(2070460..2071611) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471811.1 CDS ftsA NC_020307.1 2071673 2072935 R COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA complement(2071673..2072935) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471812.1 CDS CFSAN001992_10350 NC_020307.1 2072932 2073762 R COG1589 Cell division septal protein; cell division protein FtsQ complement(2072932..2073762) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471813.1 CDS ddl NC_020307.1 2073764 2074684 R COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanine--D-alanine ligase complement(2073764..2074684) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471814.1 CDS murC NC_020307.1 2074677 2076152 R COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(2074677..2076152) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471815.1 CDS murG NC_020307.1 2076271 2077338 R COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(2076271..2077338) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471816.1 CDS CFSAN001992_10370 NC_020307.1 2077335 2078579 R COG0772 Bacterial cell division membrane protein; cell division protein FtsW complement(2077335..2078579) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471817.1 CDS murD NC_020307.1 2078579 2079895 R COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(2078579..2079895) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471818.1 CDS mraY NC_020307.1 2079898 2080980 R COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(2079898..2080980) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471819.1 CDS murF NC_020307.1 2080974 2082332 R COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(2080974..2082332) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471820.1 CDS murE NC_020307.1 2082329 2083816 R COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(2082329..2083816) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471821.1 CDS CFSAN001992_10395 NC_020307.1 2083803 2085569 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; peptidoglycan synthase FtsI complement(2083803..2085569) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471822.1 CDS CFSAN001992_10400 NC_020307.1 2085585 2085950 R COG3116 Cell division protein; cell division protein FtsL complement(2085585..2085950) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471823.1 CDS CFSAN001992_10405 NC_020307.1 2085947 2086888 R COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltransferase complement(2085947..2086888) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471824.1 CDS CFSAN001992_10410 NC_020307.1 2086890 2087348 R COG2001 Uncharacterized protein conserved in bacteria; cell division protein MraZ complement(2086890..2087348) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471825.1 CDS CFSAN001992_10415 NC_020307.1 2087954 2088958 R COG1609 Transcriptional regulators; DNA-binding transcriptional regulator FruR complement(2087954..2088958) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471826.1 CDS ilvH NC_020307.1 2089242 2089733 R COG0440 Acetolactate synthase, small (regulatory) subunit; acetolactate synthase 3 regulatory subunit complement(2089242..2089733) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471827.1 CDS CFSAN001992_10425 NC_020307.1 2089736 2091460 R COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase 3 catalytic subunit complement(2089736..2091460) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471828.1 CDS leuO NC_020307.1 2091782 2092726 R COG0583 Transcriptional regulator; leucine transcriptional activator complement(2091782..2092726) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471829.1 CDS CFSAN001992_10435 NC_020307.1 2093383 2093469 D leu operon leader peptide 2093383..2093469 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471830.1 CDS CFSAN001992_10440 NC_020307.1 2093558 2095129 D COG0119 Isopropylmalate/homocitrate/citramalate synthases; 2-isopropylmalate synthase 2093558..2095129 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471831.1 CDS CFSAN001992_10445 NC_020307.1 2095129 2096220 D COG0473 Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 2095129..2096220 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471832.1 CDS CFSAN001992_10450 NC_020307.1 2096223 2097623 D COG0065 3-isopropylmalate dehydratase large subunit; isopropylmalate isomerase large subunit 2096223..2097623 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471833.1 CDS leuD NC_020307.1 2097634 2098239 D COG0066 3-isopropylmalate dehydratase small subunit; isopropylmalate isomerase small subunit 2097634..2098239 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471834.1 CDS CFSAN001992_10460 NC_020307.1 2098525 2098647 R leuD complement(2098525..2098647) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471835.1 CDS CFSAN001992_10465 NC_020307.1 2098740 2100398 D COG4533 ABC-type uncharacterized transport system, periplasmic component; transcriptional regulator SgrR 2098740..2100398 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471836.1 CDS tbpA NC_020307.1 2100576 2101559 D COG4143 ABC-type thiamine transport system, periplasmic component; thiamine transporter substrate binding subunit 2100576..2101559 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471837.1 CDS thiP NC_020307.1 2101535 2103145 D COG1178 ABC-type Fe3+ transport system, permease component; thiamine transporter membrane protein 2101535..2103145 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471838.1 CDS thiQ NC_020307.1 2103129 2103836 D COG3840 ABC-type thiamine transport system, ATPase component; thiamine transporter ATP-binding subunit 2103129..2103836 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471839.1 CDS CFSAN001992_10485 NC_020307.1 2103875 2104642 R COG0586 Uncharacterized membrane-associated protein; inner membrane protein complement(2103875..2104642) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471840.1 CDS CFSAN001992_10490 NC_020307.1 2104761 2105606 R COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator AraC complement(2104761..2105606) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471841.1 CDS CFSAN001992_10495 NC_020307.1 2105947 2107656 D COG1069 Ribulose kinase; ribulokinase 2105947..2107656 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471842.1 CDS CFSAN001992_10500 NC_020307.1 2107667 2109169 D COG2160 L-arabinose isomerase; L-arabinose isomerase 2107667..2109169 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471843.1 CDS araD NC_020307.1 2109310 2110005 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-ribulose-5-phosphate 4-epimerase 2109310..2110005 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471844.1 CDS CFSAN001992_10510 NC_020307.1 2110011 2110430 R cytoplasmic protein complement(2110011..2110430) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471845.1 CDS CFSAN001992_10515 NC_020307.1 2111073 2111477 D COG1434 Uncharacterized conserved protein; YdcF-like/sfiX involved in mureinsynthesis 2111073..2111477 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471846.1 CDS CFSAN001992_10520 NC_020307.1 2111547 2112752 R COG0675 Transposase and inactivated derivatives; Putative IS element transposase complement(2111547..2112752) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471847.1 CDS CFSAN001992_10525 NC_020307.1 2112784 2113215 D COG1943 Transposase and inactivated derivatives; Transposase for insertion sequence element IS200 2112784..2113215 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471848.1 CDS CFSAN001992_10530 NC_020307.1 2113281 2113511 D COG1434 Uncharacterized conserved protein; secreted protein 2113281..2113511 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471849.1 CDS CFSAN001992_10535 NC_020307.1 2113555 2115906 D COG0417 DNA polymerase elongation subunit (family B); DNA polymerase II 2113555..2115906 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471850.1 CDS CFSAN001992_10540 NC_020307.1 2116080 2118986 D COG0553 Superfamily II DNA/RNA helicases, SNF2 family; ATP-dependent helicase HepA 2116080..2118986 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471851.1 CDS CFSAN001992_10545 NC_020307.1 2118998 2119657 D COG0564 Pseudouridylate synthases, 23S RNA-specific; 23S rRNA/tRNA pseudouridine synthase A 2118998..2119657 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471852.1 CDS djlA NC_020307.1 2119752 2120564 R COG1076 DnaJ-domain-containing proteins 1; Dna-J like membrane chaperone protein complement(2119752..2120564) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471853.1 CDS CFSAN001992_10555 NC_020307.1 2120818 2123025 D COG1452 Organic solvent tolerance protein OstA; overlaps another CDS with the same product name; LPS assembly outer membrane complex protein LptD 2120818..2123025 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471854.1 CDS CFSAN001992_10560 NC_020307.1 2122962 2123171 D COG1452 Organic solvent tolerance protein OstA; overlaps another CDS with the same product name; LPS assembly outer membrane complex protein LptD 2122962..2123171 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471855.1 CDS CFSAN001992_10565 NC_020307.1 2123225 2124511 D COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase SurA 2123225..2124511 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471856.1 CDS pdxA NC_020307.1 2124511 2125500 D COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase 2124511..2125500 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471857.1 CDS ksgA NC_020307.1 2125497 2126318 D COG0030 Dimethyladenosine transferase (rRNA methylation); 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein 2125497..2126318 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471858.1 CDS apaG NC_020307.1 2126321 2126698 D COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; CO2+/MG2+ efflux protein ApaG 2126321..2126698 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471859.1 CDS apaH NC_020307.1 2126709 2127557 D COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; diadenosine tetraphosphatase 2126709..2127557 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471860.1 CDS folA NC_020307.1 2127653 2128132 R COG0262 Dihydrofolate reductase; dihydrofolate reductase complement(2127653..2128132) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471861.1 CDS CFSAN001992_10595 NC_020307.1 2128331 2130193 R COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein KefC complement(2128331..2130193) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471862.1 CDS CFSAN001992_10600 NC_020307.1 2130186 2130716 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); glutathione-regulated potassium-efflux system ancillary protein KefF complement(2130186..2130716) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471863.1 CDS CFSAN001992_10605 NC_020307.1 2131269 2131580 R COG3119 Arylsulfatase A and related enzymes; sulfatase complement(2131269..2131580) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471864.1 CDS CFSAN001992_10610 NC_020307.1 2131707 2133158 R COG3119 Arylsulfatase A and related enzymes; sulfatase complement(2131707..2133158) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471865.1 CDS CFSAN001992_10615 NC_020307.1 2134056 2134346 D UPF0379 protein yjfY Flags: Precursor 2134056..2134346 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471866.1 CDS CFSAN001992_10620 NC_020307.1 2134570 2134992 R hypothetical protein complement(2134570..2134992) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471867.1 CDS CFSAN001992_10625 NC_020307.1 2135286 2135516 R lipoprotein complement(2135286..2135516) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471868.1 CDS CFSAN001992_10630 NC_020307.1 2135605 2136945 R COG0477 Permeases of the major facilitator superfamily; metabolite transport protein YaaU complement(2135605..2136945) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471869.1 CDS CFSAN001992_10635 NC_020307.1 2137092 2137379 R COG2440 Ferredoxin-like protein; ferredoxin-like protein FixX complement(2137092..2137379) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471870.1 CDS CFSAN001992_10640 NC_020307.1 2137376 2138662 R COG0644 Dehydrogenases (flavoproteins); oxidoreductase FixC complement(2137376..2138662) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471871.1 CDS fixB NC_020307.1 2138712 2139653 R COG2025 Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein FixB complement(2138712..2139653) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471872.1 CDS CFSAN001992_10650 NC_020307.1 2139669 2140439 R COG2086 Electron transfer flavoprotein, beta subunit; electron transfer flavoprotein FixA complement(2139669..2140439) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471873.1 CDS CFSAN001992_10655 NC_020307.1 2140920 2142437 D COG1292 Choline-glycine betaine transporter; L-carnitine/gamma-butyrobetaine antiporter 2140920..2142437 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471874.1 CDS CFSAN001992_10660 NC_020307.1 2142472 2143614 D COG1960 Acyl-CoA dehydrogenases; crotonobetainyl-CoA dehydrogenase 2142472..2143614 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471875.1 CDS CFSAN001992_10665 NC_020307.1 2143726 2144943 D COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; crotonobetainyl-CoA:carnitine CoA-transferase 2143726..2144943 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471876.1 CDS caiC NC_020307.1 2145006 2146559 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; crotonobetaine/carnitine-CoA ligase 2145006..2146559 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471877.1 CDS CFSAN001992_10675 NC_020307.1 2146613 2147398 D COG1024 Enoyl-CoA hydratase/carnithine racemase; carnitinyl-CoA dehydratase 2146613..2147398 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471878.1 CDS CFSAN001992_10680 NC_020307.1 2147508 2148104 D COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; carnitine operon protein CaiE 2147508..2148104 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471879.1 CDS CFSAN001992_10685 NC_020307.1 2148181 2148576 R DNA-binding transcriptional activator CaiF complement(2148181..2148576) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471880.1 CDS carB NC_020307.1 2148850 2152077 R COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl phosphate synthase large subunit complement(2148850..2152077) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471881.1 CDS CFSAN001992_10695 NC_020307.1 2152096 2152986 R COG0505 Carbamoylphosphate synthase small subunit; overlaps another CDS with the same product name; carbamoyl phosphate synthase small subunit complement(2152096..2152986) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471882.1 CDS CFSAN001992_10700 NC_020307.1 2152983 2153243 R COG0505 Carbamoylphosphate synthase small subunit; overlaps another CDS with the same product name; carbamoyl phosphate synthase small subunit complement(2152983..2153243) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471883.1 CDS CFSAN001992_10705 NC_020307.1 2153994 2154158 D hypothetical protein 2153994..2154158 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471884.1 CDS CFSAN001992_10710 NC_020307.1 2154285 2155106 R COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(2154285..2155106) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471885.1 CDS CFSAN001992_10715 NC_020307.1 2155286 2156194 R COG1767 Triphosphoribosyl-dephospho-CoA synthetase; triphosphoribosyl-dephospho-CoA synthase complement(2155286..2156194) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471886.1 CDS CFSAN001992_10720 NC_020307.1 2156172 2156723 R COG3697 Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase); putative cytoplasmic protein complement(2156172..2156723) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471887.1 CDS CFSAN001992_10725 NC_020307.1 2156723 2158243 R COG3051 Citrate lyase, alpha subunit; citrate lyase subunit alpha complement(2156723..2158243) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471888.1 CDS CFSAN001992_10730 NC_020307.1 2158254 2159123 R COG2301 Citrate lyase beta subunit; citrate lyase subunit beta complement(2158254..2159123) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471889.1 CDS CFSAN001992_10735 NC_020307.1 2159120 2159413 R COG3052 Citrate lyase, gamma subunit; citrate lyase subunit gamma complement(2159120..2159413) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471890.1 CDS CFSAN001992_10740 NC_020307.1 2159443 2160474 R COG3053 Citrate lyase synthetase; [citrate [pro-3S]-lyase] ligase complement(2159443..2160474) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471891.1 CDS CFSAN001992_10745 NC_020307.1 2160731 2162071 D COG3493 Na+/citrate symporter; citrate-sodium symporter 2160731..2162071 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471892.1 CDS CFSAN001992_10750 NC_020307.1 2162230 2162469 D COG3630 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit; oxaloacetate decarboxylase subunit gamma 2162230..2162469 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471893.1 CDS CFSAN001992_10755 NC_020307.1 2162485 2164254 D COG5016 Pyruvate/oxaloacetate carboxyltransferase; oxaloacetate decarboxylase 2162485..2164254 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471894.1 CDS CFSAN001992_10760 NC_020307.1 2164270 2165571 D COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; putative oxalacetate decarboxylase subunit beta 2164270..2165571 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471895.1 CDS CFSAN001992_10765 NC_020307.1 2165706 2167325 D COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; sensor kinase DpiB 2165706..2167325 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471896.1 CDS CFSAN001992_10770 NC_020307.1 2167327 2168013 D COG4565 Response regulator of citrate/malate metabolism; putative C4-dicarboxylate response regulator dctR 2167327..2168013 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471897.1 CDS CFSAN001992_10775 NC_020307.1 2168035 2168955 R COG1957 Inosine-uridine nucleoside N-ribohydrolase; ribonucleoside hydrolase RihC complement(2168035..2168955) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471898.1 CDS CFSAN001992_10780 NC_020307.1 2168971 2170173 R hypothetical protein complement(2168971..2170173) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471899.1 CDS ispH NC_020307.1 2170373 2171323 R COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2170373..2171323) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471900.1 CDS CFSAN001992_10790 NC_020307.1 2171326 2171775 R COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase complement(2171326..2171775) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471901.1 CDS lspA NC_020307.1 2171930 2172430 R COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase complement(2171930..2172430) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471902.1 CDS ileS NC_020307.1 2172430 2175264 R COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA ligase complement(2172430..2175264) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471903.1 CDS CFSAN001992_10805 NC_020307.1 2175309 2176247 R COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase complement(2175309..2176247) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471904.1 CDS CFSAN001992_10810 NC_020307.1 2176255 2176470 R hypothetical protein complement(2176255..2176470) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471905.1 CDS rpsT NC_020307.1 2176576 2176839 D COG0268 Ribosomal protein S20; 30S ribosomal protein S20 2176576..2176839 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471906.1 CDS CFSAN001992_10820 NC_020307.1 2177300 2178673 D COG2211 Na+/melibiose symporter and related transporters; Xyloside transporter XynT 2177300..2178673 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471907.1 CDS CFSAN001992_10825 NC_020307.1 2178713 2180752 D COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; glycoside hydrolase, family 31 2178713..2180752 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471908.1 CDS nhaR NC_020307.1 2180807 2181700 R COG0583 Transcriptional regulator; transcriptional activator NhaR complement(2180807..2181700) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471909.1 CDS nhaA NC_020307.1 2181768 2182934 R COG3004 Na+/H+ antiporter; pH-dependent sodium/proton antiporter complement(2181768..2182934) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471910.1 CDS CFSAN001992_10840 NC_020307.1 2183097 2183258 R putative sulfatase complement(2183097..2183258) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471911.1 CDS CFSAN001992_10845 NC_020307.1 2183246 2183503 R sulfatase complement(2183246..2183503) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471912.1 CDS CFSAN001992_10860 NC_020307.1 2184858 2186087 R COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); putative arylsulfatase regulator complement(2184858..2186087) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471913.1 CDS CFSAN001992_10865 NC_020307.1 2186191 2187684 R COG3119 Arylsulfatase A and related enzymes; arylsulfatase complement(2186191..2187684) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471914.1 CDS CFSAN001992_10870 NC_020307.1 2187705 2188469 R hypothetical protein complement(2187705..2188469) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471915.1 CDS CFSAN001992_10875 NC_020307.1 2188925 2189221 D COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; secreted 5'-nucleotidase 2188925..2189221 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471916.1 CDS CFSAN001992_10880 NC_020307.1 2189426 2189587 R arylsulfatase complement(2189426..2189587) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471917.1 CDS CFSAN001992_10885 NC_020307.1 2190651 2190824 D hypothetical protein 2190651..2190824 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471918.1 CDS CFSAN001992_10890 NC_020307.1 2190946 2191230 R hypothetical protein complement(2190946..2191230) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471919.1 CDS CFSAN001992_10895 NC_020307.1 2191298 2192143 R COG1651 Protein-disulfide isomerase; putative disulfide bond formation protein D complement(2191298..2192143) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471920.1 CDS CFSAN001992_10900 NC_020307.1 2192208 2192912 R COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone BcfG complement(2192208..2192912) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471921.1 CDS CFSAN001992_10905 NC_020307.1 2192905 2193423 R COG3539 P pilus assembly protein, pilin FimA; fimbrial protein BcfF complement(2192905..2193423) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471922.1 CDS CFSAN001992_10910 NC_020307.1 2193439 2193984 R fimbrial protein BcfE complement(2193439..2193984) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471923.1 CDS CFSAN001992_10915 NC_020307.1 2193985 2194992 R COG3539 P pilus assembly protein, pilin FimA; fimbrial protein BcfD complement(2193985..2194992) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471924.1 CDS CFSAN001992_10920 NC_020307.1 2194993 2197614 R COG3188 P pilus assembly protein, porin PapC; outer membrane usher protein complement(2194993..2197614) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471925.1 CDS CFSAN001992_10925 NC_020307.1 2197619 2198305 R COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone protein BcfB complement(2197619..2198305) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471926.1 CDS CFSAN001992_10930 NC_020307.1 2198406 2198948 R COG3539 P pilus assembly protein, pilin FimA; fimbrial protein BcfA complement(2198406..2198948) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471927.1 CDS CFSAN001992_10935 NC_020307.1 2199378 2200070 R cytoplasmic protein complement(2199378..2200070) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471928.1 CDS CFSAN001992_10940 NC_020307.1 2200362 2203358 R hydroxymethyltransferase complement(2200362..2203358) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471931.1 CDS CFSAN001992_10955 NC_020307.1 2205931 2206374 D COG3710 DNA-binding winged-HTH domains; hypothetical protein 2205931..2206374 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471932.1 CDS CFSAN001992_10960 NC_020307.1 2206391 2206924 D COG3926 Putative secretion activating protein; hypothetical protein 2206391..2206924 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471933.1 CDS CFSAN001992_10965 NC_020307.1 2206985 2207329 R hypothetical protein complement(2206985..2207329) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471934.1 CDS CFSAN001992_10970 NC_020307.1 2207456 2208403 R COG0583 Transcriptional regulator; transcriptional regulator complement(2207456..2208403) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471935.1 CDS CFSAN001992_10975 NC_020307.1 2208684 2209823 R COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ complement(2208684..2209823) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471936.1 CDS dnaK NC_020307.1 2209909 2211825 R COG0443 Molecular chaperone; molecular chaperone DnaK complement(2209909..2211825) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471937.1 CDS CFSAN001992_10985 NC_020307.1 2212174 2212578 D hypothetical protein 2212174..2212578 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471938.1 CDS CFSAN001992_10990 NC_020307.1 2212614 2213327 D COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein 2212614..2213327 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471939.1 CDS CFSAN001992_10995 NC_020307.1 2213477 2214043 D COG1584 Predicted membrane protein; hypothetical protein 2213477..2214043 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471940.1 CDS mogA NC_020307.1 2214100 2214690 R COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein MogA complement(2214100..2214690) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471941.1 CDS CFSAN001992_11005 NC_020307.1 2214801 2215754 R COG0176 Transaldolase; transaldolase B complement(2214801..2215754) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471942.1 CDS CFSAN001992_11010 NC_020307.1 2216023 2217453 D COG1115 Na+/alanine symporter; amino-acid carrier protein AlsT 2216023..2217453 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471943.1 CDS CFSAN001992_11015 NC_020307.1 2217532 2218305 D COG3022 Uncharacterized protein conserved in bacteria; hypothetical protein 2217532..2218305 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471944.1 CDS CFSAN001992_11020 NC_020307.1 2218399 2219685 R COG0498 Threonine synthase; threonine synthase complement(2218399..2219685) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471945.1 CDS CFSAN001992_11025 NC_020307.1 2219689 2220618 R COG0083 Homoserine kinase; homoserine kinase complement(2219689..2220618) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471946.1 CDS thrA NC_020307.1 2220620 2223082 R COG0527 Aspartokinases; bifunctional aspartokinase I/homoserine dehydrogenase I complement(2220620..2223082) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471947.1 CDS CFSAN001992_11035 NC_020307.1 2223189 2223311 D hypothetical protein 2223189..2223311 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471948.1 CDS CFSAN001992_11040 NC_020307.1 2223443 2224129 R COG0565 rRNA methylase; RNA methyltransferase complement(2223443..2224129) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471949.1 CDS CFSAN001992_11045 NC_020307.1 2224765 2225481 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; two-component response regulator 2224765..2225481 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471950.1 CDS CFSAN001992_11050 NC_020307.1 2225748 2226062 D hypothetical protein 2225748..2226062 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471951.1 CDS CFSAN001992_11055 NC_020307.1 2226447 2227118 D COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; hypothetical protein 2226447..2227118 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471952.1 CDS CFSAN001992_11060 NC_020307.1 2227457 2228002 D COG3539 P pilus assembly protein, pilin FimA; fimbrial protein SthA 2227457..2228002 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471953.1 CDS CFSAN001992_11065 NC_020307.1 2228073 2228756 D COG3121 P pilus assembly protein, chaperone PapD; fimbrial assembly chaperone SthB 2228073..2228756 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471954.1 CDS CFSAN001992_11070 NC_020307.1 2228802 2231339 D COG3188 P pilus assembly protein, porin PapC; fimbrial outer membrane usher protein SthC 2228802..2231339 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471955.1 CDS CFSAN001992_11075 NC_020307.1 2231357 2231914 D COG3539 P pilus assembly protein, pilin FimA; fimbrial protein SthD 2231357..2231914 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471956.1 CDS CFSAN001992_11080 NC_020307.1 2231955 2233040 D COG3539 P pilus assembly protein, pilin FimA; major fimbrial protein SthE 2231955..2233040 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471957.1 CDS CFSAN001992_11085 NC_020307.1 2233098 2234447 R COG4452 Inner membrane protein involved in colicin E2 resistance; hypothetical protein complement(2233098..2234447) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471958.1 CDS CFSAN001992_11090 NC_020307.1 2234505 2235929 R COG0642 Signal transduction histidine kinase; sensory histidine kinase CreC complement(2234505..2235929) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471959.1 CDS CFSAN001992_11095 NC_020307.1 2235929 2236618 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding response regulator CreB complement(2235929..2236618) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471960.1 CDS CFSAN001992_11100 NC_020307.1 2236631 2237104 R COG3045 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2236631..2237104) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471961.1 CDS CFSAN001992_11105 NC_020307.1 2237316 2238185 D COG2207 AraC-type DNA-binding domain-containing proteins; right oriC-binding transcriptional activator 2237316..2238185 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471962.1 CDS CFSAN001992_11110 NC_020307.1 2238182 2238829 R COG0406 Fructose-2,6-bisphosphatase; phosphoglycerate mutase complement(2238182..2238829) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471963.1 CDS CFSAN001992_11115 NC_020307.1 2238878 2239393 D COG1986 Uncharacterized conserved protein; inosine/xanthosine triphosphatase 2238878..2239393 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471964.1 CDS CFSAN001992_11120 NC_020307.1 2239495 2239821 R COG2973 Trp operon repressor; Trp operon repressor complement(2239495..2239821) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471965.1 CDS CFSAN001992_11125 NC_020307.1 2239879 2241816 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic murein transglycosylase complement(2239879..2241816) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471966.1 CDS CFSAN001992_11130 NC_020307.1 2242025 2243692 D COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein 2242025..2243692 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471967.1 CDS CFSAN001992_11135 NC_020307.1 2243810 2245042 R COG1396 Predicted transcriptional regulators; bifunctional DNA-binding transcriptional repressor/ NMN adenylyltransferase complement(2243810..2245042) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471968.1 CDS CFSAN001992_11140 NC_020307.1 2245193 2246575 R COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA complement(2245193..2246575) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471969.1 CDS serB NC_020307.1 2246659 2247627 R COG0560 Phosphoserine phosphatase; phosphoserine phosphatase complement(2246659..2247627) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471970.1 CDS CFSAN001992_11150 NC_020307.1 2247744 2248388 D COG3726 Uncharacterized membrane protein affecting hemolysin expression; hypothetical protein 2247744..2248388 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471971.1 CDS lplA NC_020307.1 2248422 2249438 D COG0095 Lipoate-protein ligase A; lipoate-protein ligase A 2248422..2249438 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471972.1 CDS CFSAN001992_11160 NC_020307.1 2249749 2250438 D hypothetical protein 2249749..2250438 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471973.1 CDS CFSAN001992_11165 NC_020307.1 2250486 2251175 D hypothetical protein 2250486..2251175 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471974.1 CDS CFSAN001992_11170 NC_020307.1 2251253 2251960 D COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone protein 2251253..2251960 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471975.1 CDS CFSAN001992_11175 NC_020307.1 2251974 2254382 D COG3188 P pilus assembly protein, porin PapC; fimbrial outer membrane usher protein 2251974..2254382 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471976.1 CDS CFSAN001992_11180 NC_020307.1 2254379 2254951 D hypothetical protein 2254379..2254951 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471977.1 CDS deoD NC_020307.1 2254989 2255708 R COG0813 Purine-nucleoside phosphorylase; purine nucleoside phosphorylase complement(2254989..2255708) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471978.1 CDS CFSAN001992_11190 NC_020307.1 2255918 2257141 R COG1015 Phosphopentomutase; phosphopentomutase complement(2255918..2257141) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471979.1 CDS deoA NC_020307.1 2257193 2258515 R COG0213 Thymidine phosphorylase; thymidine phosphorylase complement(2257193..2258515) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471980.1 CDS CFSAN001992_11200 NC_020307.1 2258639 2259418 R COG0274 Deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase complement(2258639..2259418) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471981.1 CDS CFSAN001992_11205 NC_020307.1 2259678 2261228 D COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; hypothetical protein 2259678..2261228 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471982.1 CDS CFSAN001992_11210 NC_020307.1 2261200 2262063 D COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase activating enzyme 2261200..2262063 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471983.1 CDS CFSAN001992_11215 NC_020307.1 2262096 2262869 R COG0084 Mg-dependent DNase; deoxyribonuclease YjjV complement(2262096..2262869) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471984.1 CDS CFSAN001992_11220 NC_020307.1 2262866 2263939 R COG4667 Predicted esterase of the alpha-beta hydrolase superfamily; patatin complement(2262866..2263939) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471985.1 CDS CFSAN001992_11225 NC_020307.1 2264063 2264224 R hypothetical protein complement(2264063..2264224) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471986.1 CDS CFSAN001992_11230 NC_020307.1 2264353 2264970 R COG2823 Predicted periplasmic or secreted lipoprotein; periplasmic protein complement(2264353..2264970) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471987.1 CDS prfC NC_020307.1 2265372 2266961 R COG4108 Peptide chain release factor RF-3; peptide chain release factor 3 complement(2265372..2266961) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471988.1 CDS CFSAN001992_11240 NC_020307.1 2267053 2267730 R COG1011 Predicted hydrolase (HAD superfamily); dUMP phosphatase complement(2267053..2267730) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471989.1 CDS rimI NC_020307.1 2267752 2268198 R COG0456 Acetyltransferases; ribosomal-protein-alanine N-acetyltransferase complement(2267752..2268198) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471990.1 CDS CFSAN001992_11250 NC_020307.1 2268143 2268580 R COG3050 DNA polymerase III, psi subunit; DNA polymerase III subunit psi complement(2268143..2268580) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471991.1 CDS rsmC NC_020307.1 2268683 2269711 D COG2813 16S RNA G1207 methylase RsmC; 16S ribosomal RNA m2G1207 methyltransferase 2268683..2269711 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471992.1 CDS CFSAN001992_11260 NC_020307.1 2270252 2270488 R tryptophan-specific transport protein complement(2270252..2270488) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471993.1 CDS CFSAN001992_11265 NC_020307.1 2270739 2271803 D COG2199 FOG: GGDEF domain; hypothetical protein 2270739..2271803 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471994.1 CDS CFSAN001992_11270 NC_020307.1 2271924 2272712 D COG4114 Uncharacterized Fe-S protein; ferric iron reductase involved in ferric hydroximate transport 2271924..2272712 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471995.1 CDS CFSAN001992_11275 NC_020307.1 2272863 2273321 D COG2606 Uncharacterized conserved protein; prolyl-tRNA synthetase 2272863..2273321 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471996.1 CDS CFSAN001992_11280 NC_020307.1 2273372 2273995 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; DNA-binding transcriptional activator BglJ complement(2273372..2273995) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471997.1 CDS CFSAN001992_11285 NC_020307.1 2274007 2274732 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Putative regulator complement(2274007..2274732) Salmonella enterica subsp. enterica serovar Javiana str. YP_007471998.1 CDS CFSAN001992_11290 NC_020307.1 2275444 2276220 D COG2966 Uncharacterized conserved protein; hypothetical protein 2275444..2276220 Salmonella enterica subsp. enterica serovar Javiana str. YP_007471999.1 CDS CFSAN001992_11295 NC_020307.1 2276211 2276684 D COG3610 Uncharacterized conserved protein; hypothetical protein 2276211..2276684 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472000.1 CDS CFSAN001992_11300 NC_020307.1 2276777 2277316 D primosomal protein DnaI 2276777..2277316 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472001.1 CDS CFSAN001992_11305 NC_020307.1 2277319 2278056 D COG1484 DNA replication protein; DNA replication protein DnaC 2277319..2278056 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472002.1 CDS CFSAN001992_11310 NC_020307.1 2278114 2278605 D hypothetical protein 2278114..2278605 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472003.1 CDS CFSAN001992_11315 NC_020307.1 2278888 2281179 D COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; phosphoglycerol transferase I 2278888..2281179 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472004.1 CDS CFSAN001992_11320 NC_020307.1 2281348 2283009 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein I complement(2281348..2283009) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472005.1 CDS CFSAN001992_11325 NC_020307.1 2283376 2285526 D COG1966 Carbon starvation protein, predicted membrane protein; Inner membrane protein yjiY 2283376..2285526 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472006.1 CDS CFSAN001992_11330 NC_020307.1 2285621 2285824 D COG2879 Uncharacterized small protein; hypothetical protein 2285621..2285824 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472007.1 CDS CFSAN001992_11335 NC_020307.1 2285835 2286791 D COG0523 Putative GTPases (G3E family); GTP-binding protein YjiA 2285835..2286791 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472008.1 CDS CFSAN001992_11340 NC_020307.1 2286828 2287643 D COG2207 AraC-type DNA-binding domain-containing proteins; negative transcriptional regulator of cel operon 2286828..2287643 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472009.1 CDS CFSAN001992_11345 NC_020307.1 2287691 2288332 D COG1280 Putative threonine efflux protein; transporter LysE family protein 2287691..2288332 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472010.1 CDS CFSAN001992_11350 NC_020307.1 2288743 2289663 D COG1637 Predicted nuclease of the RecB family; transporter 2288743..2289663 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472011.1 CDS CFSAN001992_11355 NC_020307.1 2289740 2289904 R putative cytoplasmic protein complement(2289740..2289904) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472012.1 CDS CFSAN001992_11360 NC_020307.1 2290109 2291479 R COG1012 NAD-dependent aldehyde dehydrogenases; succinate-semialdehyde dehydrogenase (NADP+) complement(2290109..2291479) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472013.1 CDS CFSAN001992_11365 NC_020307.1 2291550 2291663 D hypothetical protein 2291550..2291663 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472014.1 CDS CFSAN001992_11370 NC_020307.1 2291660 2292613 R hypothetical protein complement(2291660..2292613) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472015.1 CDS CFSAN001992_11375 NC_020307.1 2293092 2294333 D COG0477 Permeases of the major facilitator superfamily; multidrug efflux system protein MdtM 2293092..2294333 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472016.1 CDS CFSAN001992_11380 NC_020307.1 2294420 2295691 D COG2733 Predicted membrane protein; hypothetical protein 2294420..2295691 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472017.1 CDS CFSAN001992_11385 NC_020307.1 2295900 2297084 D COG0477 Permeases of the major facilitator superfamily; transporter, major facilitator family protein 2295900..2297084 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472018.1 CDS CFSAN001992_11390 NC_020307.1 2297956 2298627 D COG3314 Uncharacterized protein conserved in bacteria; hypothetical protein 2297956..2298627 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472019.1 CDS CFSAN001992_11395 NC_020307.1 2298624 2299085 D COG0700 Uncharacterized membrane protein; hypothetical protein 2298624..2299085 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472020.1 CDS CFSAN001992_11400 NC_020307.1 2299098 2300270 D COG0044 Dihydroorotase and related cyclic amidohydrolases; isoaspartyl dipeptidase 2299098..2300270 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472021.1 CDS CFSAN001992_11405 NC_020307.1 2300389 2301297 D COG0583 Transcriptional regulator; cell density-dependent motility repressor 2300389..2301297 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472022.1 CDS CFSAN001992_11410 NC_020307.1 2301303 2302007 R COG1794 Aspartate racemase; aspartate racemase complement(2301303..2302007) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472023.1 CDS CFSAN001992_11415 NC_020307.1 2302275 2302721 R COG3157 Hemolysin-coregulated protein (uncharacterized); hypothetical protein complement(2302275..2302721) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472024.1 CDS CFSAN001992_11420 NC_020307.1 2303523 2304536 D COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA ligase II 2303523..2304536 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472025.1 CDS CFSAN001992_11425 NC_020307.1 2304537 2305310 R COG2186 Transcriptional regulators; DNA-binding transcriptional repressor UxuR complement(2304537..2305310) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472026.1 CDS CFSAN001992_11430 NC_020307.1 2305660 2306334 D COG0412 Dienelactone hydrolase and related enzymes; dienelactone hydrolase 2305660..2306334 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472027.1 CDS CFSAN001992_11435 NC_020307.1 2306331 2306792 R COG3439 Uncharacterized conserved protein; hypothetical protein complement(2306331..2306792) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472028.1 CDS CFSAN001992_11440 NC_020307.1 2306998 2307909 R hypothetical protein complement(2306998..2307909) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472029.1 CDS CFSAN001992_11445 NC_020307.1 2308261 2308869 R COG4332 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2308261..2308869) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472030.1 CDS CFSAN001992_11450 NC_020307.1 2308923 2309114 D hypothetical protein 2308923..2309114 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472031.1 CDS CFSAN001992_11455 NC_020307.1 2309357 2309614 D COG3811 Uncharacterized protein conserved in bacteria; hypothetical protein 2309357..2309614 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472032.1 CDS CFSAN001992_11460 NC_020307.1 2310504 2311250 D COG0500 SAM-dependent methyltransferases; methionine biosynthesis protein MetW 2310504..2311250 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472033.1 CDS CFSAN001992_11465 NC_020307.1 2311810 2312526 D COG0217 Uncharacterized conserved protein; hypothetical protein 2311810..2312526 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472034.1 CDS CFSAN001992_11470 NC_020307.1 2312988 2313878 R COG3440 Predicted restriction endonuclease; HNH nuclease complement(2312988..2313878) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472035.1 CDS CFSAN001992_11475 NC_020307.1 2314273 2315280 R COG4127 Uncharacterized conserved protein; restriction endonuclease complement(2314273..2315280) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472036.1 CDS CFSAN001992_11480 NC_020307.1 2315539 2315880 R toxin complement(2315539..2315880) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472037.1 CDS CFSAN001992_11485 NC_020307.1 2315901 2316242 R hypothetical protein complement(2315901..2316242) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472038.1 CDS CFSAN001992_11490 NC_020307.1 2316610 2319063 D COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction-modification system, M subunit 2316610..2319063 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472039.1 CDS CFSAN001992_11495 NC_020307.1 2319078 2320439 D COG0732 Restriction endonuclease S subunits; type I restriction-modification system specificty subunit 2319078..2320439 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472040.1 CDS CFSAN001992_11500 NC_020307.1 2320436 2321869 D COG1479 Uncharacterized conserved protein; hypothetical protein 2320436..2321869 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472041.1 CDS CFSAN001992_11505 NC_020307.1 2321862 2323895 D COG1479 Uncharacterized conserved protein; hypothetical protein 2321862..2323895 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472042.1 CDS CFSAN001992_11510 NC_020307.1 2323892 2326987 D COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; HsdR family type I site-specific deoxyribonuclease 2323892..2326987 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472043.1 CDS CFSAN001992_11515 NC_020307.1 2326987 2327700 D COG1451 Predicted metal-dependent hydrolase; hypothetical protein 2326987..2327700 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472044.1 CDS CFSAN001992_11520 NC_020307.1 2327746 2329227 R COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction-modification system, M subunit complement(2327746..2329227) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472045.1 CDS CFSAN001992_11525 NC_020307.1 2329220 2329822 R COG0732 Restriction endonuclease S subunits; hypothetical protein complement(2329220..2329822) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472046.1 CDS CFSAN001992_11530 NC_020307.1 2329839 2330027 R hypothetical protein complement(2329839..2330027) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472047.1 CDS CFSAN001992_11535 NC_020307.1 2330290 2331537 R COG0582 Integrase; phage integrase family site-specific recombinase complement(2330290..2331537) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472048.1 CDS CFSAN001992_11540 NC_020307.1 2332043 2333062 D COG1064 Zn-dependent alcohol dehydrogenases; putative alcohol dehydrogenase 2332043..2333062 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472049.1 CDS idnK NC_020307.1 2333090 2333620 R COG3265 Gluconate kinase; D-gluconate kinase complement(2333090..2333620) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472050.1 CDS CFSAN001992_11550 NC_020307.1 2333837 2334868 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; L-idonate 5-dehydrogenase 2333837..2334868 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472051.1 CDS CFSAN001992_11555 NC_020307.1 2334893 2335657 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); gluconate 5-dehydrogenase 2334893..2335657 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472052.1 CDS CFSAN001992_11560 NC_020307.1 2335719 2337038 D COG2610 H+/gluconate symporter and related permeases; Gnt-II system L-idonate transporter IdnT 2335719..2337038 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472053.1 CDS CFSAN001992_11565 NC_020307.1 2337102 2338100 D COG1609 Transcriptional regulators; DNA-binding transcriptional regulator IdnR 2337102..2338100 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472054.1 CDS CFSAN001992_11570 NC_020307.1 2338327 2339409 R COG0795 Predicted permeases; lipopolysaccharide ABC transporter permease complement(2338327..2339409) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472055.1 CDS CFSAN001992_11575 NC_020307.1 2339409 2340509 R COG0795 Predicted permeases; lipopolysaccharide ABC transporter permease LptF complement(2339409..2340509) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472056.1 CDS CFSAN001992_11580 NC_020307.1 2340904 2342415 D COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A 2340904..2342415 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472057.1 CDS CFSAN001992_11585 NC_020307.1 2342552 2342995 D COG2927 DNA polymerase III, chi subunit; DNA polymerase III subunit chi 2342552..2342995 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472058.1 CDS valS NC_020307.1 2342995 2345850 D COG0525 Valyl-tRNA synthetase; valyl-tRNA ligase 2342995..2345850 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472059.1 CDS CFSAN001992_11595 NC_020307.1 2345992 2347179 R COG4269 Predicted membrane protein; hypothetical protein complement(2345992..2347179) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472060.1 CDS CFSAN001992_11600 NC_020307.1 2347374 2347877 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase 2347374..2347877 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472061.1 CDS CFSAN001992_11605 NC_020307.1 2347984 2348472 D hypothetical protein 2347984..2348472 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472062.1 CDS CFSAN001992_11610 NC_020307.1 2348602 2348706 D hypothetical protein 2348602..2348706 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472063.1 CDS CFSAN001992_11615 NC_020307.1 2348716 2349480 R COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; hydrolase complement(2348716..2349480) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472064.1 CDS CFSAN001992_11620 NC_020307.1 2349540 2349956 R COG3076 Uncharacterized protein conserved in bacteria; RNase E inhibitor protein complement(2349540..2349956) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472065.1 CDS CFSAN001992_11625 NC_020307.1 2350122 2351126 D COG0078 Ornithine carbamoyltransferase; ornithine carbamoyltransferase subunit I 2350122..2351126 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472066.1 CDS CFSAN001992_11630 NC_020307.1 2351199 2351651 R COG2731 Beta-galactosidase, beta subunit; hypothetical protein complement(2351199..2351651) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472067.1 CDS CFSAN001992_11635 NC_020307.1 2352327 2353547 D COG2235 Arginine deiminase; arginine deiminase 2352327..2353547 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472068.1 CDS CFSAN001992_11640 NC_020307.1 2353558 2354490 D COG0549 Carbamate kinase; carbamate kinase 2353558..2354490 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472069.1 CDS CFSAN001992_11645 NC_020307.1 2354602 2355606 D COG0078 Ornithine carbamoyltransferase; ornithine carbamoyltransferase 2354602..2355606 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472070.1 CDS CFSAN001992_11650 NC_020307.1 2355662 2357065 D COG1288 Predicted membrane protein; C4-dicarboxylate anaerobic carrier 2355662..2357065 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472071.1 CDS CFSAN001992_11655 NC_020307.1 2357151 2357249 R hypothetical protein complement(2357151..2357249) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472072.1 CDS CFSAN001992_11660 NC_020307.1 2357252 2357740 D COG1438 Arginine repressor; transcriptional regulator 2357252..2357740 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472073.1 CDS CFSAN001992_11665 NC_020307.1 2357831 2357932 D pyrBI operon leader peptide 2357831..2357932 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472074.1 CDS pyrB NC_020307.1 2357968 2358903 D COG0540 Aspartate carbamoyltransferase, catalytic chain; aspartate carbamoyltransferase catalytic subunit 2357968..2358903 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472075.1 CDS CFSAN001992_11675 NC_020307.1 2358916 2359377 D COG1781 Aspartate carbamoyltransferase, regulatory subunit; aspartate carbamoyltransferase regulatory subunit 2358916..2359377 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472076.1 CDS CFSAN001992_11680 NC_020307.1 2359454 2359840 D COG0251 Putative translation initiation inhibitor, yjgF family; Protein tdcF 2359454..2359840 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472077.1 CDS CFSAN001992_11685 NC_020307.1 2359915 2360361 D COG2801 Transposase and inactivated derivatives; transposase subfamily protein 2359915..2360361 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472078.1 CDS CFSAN001992_11690 NC_020307.1 2360477 2363185 R COG0474 Cation transport ATPase; magnesium-transporting ATPase MgtA complement(2360477..2363185) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472079.1 CDS treR NC_020307.1 2363576 2364523 D COG1609 Transcriptional regulators; trehalose repressor 2363576..2364523 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472080.1 CDS CFSAN001992_11700 NC_020307.1 2364661 2366079 D COG1264 Phosphotransferase system IIB components; PTS system trehalose(maltose)-specific transporter subunits IIBC 2364661..2366079 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472081.1 CDS CFSAN001992_11705 NC_020307.1 2366129 2367781 D COG0366 Glycosidases; trehalose-6-phosphate hydrolase 2366129..2367781 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472082.1 CDS CFSAN001992_11710 NC_020307.1 2368190 2370328 D COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; anaerobic ribonucleoside triphosphate reductase 2368190..2370328 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472083.1 CDS nrdG NC_020307.1 2370545 2371009 D COG0602 Organic radical activating enzymes; anaerobic ribonucleotide reductase-activating protein 2370545..2371009 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472084.1 CDS CFSAN001992_11720 NC_020307.1 2371013 2371297 R COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; toxin complement(2371013..2371297) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472085.1 CDS CFSAN001992_11725 NC_020307.1 2371287 2371529 R COG3077 DNA-damage-inducible protein J; bifunctional antitoxin/transcriptional repressor RelB complement(2371287..2371529) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472086.1 CDS CFSAN001992_11730 NC_020307.1 2371607 2373520 R COG3711 Transcriptional antiterminator; transcriptional antiterminator BglG complement(2371607..2373520) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472087.1 CDS CFSAN001992_11735 NC_020307.1 2373537 2374277 R hypothetical protein complement(2373537..2374277) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472088.1 CDS CFSAN001992_11740 NC_020307.1 2374274 2375392 R COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; hypothetical protein complement(2374274..2375392) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472089.1 CDS CFSAN001992_11745 NC_020307.1 2375376 2376509 R COG3964 Predicted amidohydrolase; dihydroorotase complement(2375376..2376509) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472090.1 CDS CFSAN001992_11750 NC_020307.1 2376568 2376888 R hypothetical protein complement(2376568..2376888) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472091.1 CDS CFSAN001992_11755 NC_020307.1 2376864 2377211 R phosphotransferase complement(2376864..2377211) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472092.1 CDS CFSAN001992_11760 NC_020307.1 2377223 2377999 R hypothetical protein complement(2377223..2377999) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472093.1 CDS CFSAN001992_11765 NC_020307.1 2378022 2378321 R putative cytoplasmic protein complement(2378022..2378321) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472094.1 CDS CFSAN001992_11770 NC_020307.1 2378324 2378686 R hypothetical protein complement(2378324..2378686) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472095.1 CDS CFSAN001992_11775 NC_020307.1 2378697 2379026 R putative cytoplasmic protein complement(2378697..2379026) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472096.1 CDS CFSAN001992_11780 NC_020307.1 2379313 2379699 R COG3783 Soluble cytochrome b562; cytochrome b562 complement(2379313..2379699) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472097.1 CDS CFSAN001992_11785 NC_020307.1 2379798 2381138 R COG0312 Predicted Zn-dependent proteases and their inactivated homologs; peptidase PmbA complement(2379798..2381138) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472098.1 CDS CFSAN001992_11790 NC_020307.1 2381246 2381797 D COG3028 Uncharacterized protein conserved in bacteria; hypothetical protein 2381246..2381797 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472099.1 CDS CFSAN001992_11795 NC_020307.1 2381904 2383277 R COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(2381904..2383277) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472100.1 CDS CFSAN001992_11800 NC_020307.1 2383452 2384450 D COG0158 Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase 2383452..2384450 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472101.1 CDS CFSAN001992_11805 NC_020307.1 2384677 2385207 D COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase 2384677..2385207 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472102.1 CDS CFSAN001992_11810 NC_020307.1 2385617 2386780 D COG3964 Predicted amidohydrolase; metallo-dependent hydrolase 2385617..2386780 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472103.1 CDS CFSAN001992_11815 NC_020307.1 2386777 2387529 D COG0477 Permeases of the major facilitator superfamily; Vesicular glutamate transporter 3 VGluT3 , Solute carrier family 17 member 8 2386777..2387529 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472104.1 CDS CFSAN001992_11820 NC_020307.1 2387492 2387986 D COG0477 Permeases of the major facilitator superfamily; hypothetical protein 2387492..2387986 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472105.1 CDS CFSAN001992_11825 NC_020307.1 2388041 2388385 R COG2105 Uncharacterized conserved protein; UPF0131 protein ytfP complement(2388041..2388385) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472106.1 CDS CFSAN001992_11830 NC_020307.1 2388388 2392167 R COG2911 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2388388..2392167) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472107.1 CDS CFSAN001992_11835 NC_020307.1 2392164 2393897 R COG0729 Outer membrane protein; surface antigen (D15) complement(2392164..2393897) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472108.1 CDS CFSAN001992_11840 NC_020307.1 2394110 2394748 D COG0225 Peptide methionine sulfoxide reductase; methionine sulfoxide reductase A 2394110..2394748 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472109.1 CDS CFSAN001992_11845 NC_020307.1 2394931 2396274 D COG1253 Hemolysins and related proteins containing CBS domains; transporter 2394931..2396274 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472110.1 CDS CFSAN001992_11850 NC_020307.1 2396359 2396565 R putative cytoplasmic protein complement(2396359..2396565) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472111.1 CDS CFSAN001992_11855 NC_020307.1 2396891 2397448 D COG3054 Predicted transcriptional regulator; hypothetical protein 2396891..2397448 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472112.1 CDS CFSAN001992_11860 NC_020307.1 2397438 2398178 R COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; adenosine-3'(2'),5'-bisphosphate nucleotidase complement(2397438..2398178) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472113.1 CDS cpdB NC_020307.1 2398446 2400389 D COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein 2398446..2400389 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472114.1 CDS CFSAN001992_11870 NC_020307.1 2400447 2400833 R COG1733 Predicted transcriptional regulators; putative HTH-type transcriptional regulator ytfH complement(2400447..2400833) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472115.1 CDS CFSAN001992_11875 NC_020307.1 2400921 2401769 D COG0702 Predicted nucleoside-diphosphate-sugar epimerases; hypothetical protein 2400921..2401769 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472116.1 CDS CFSAN001992_11880 NC_020307.1 2401850 2402815 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Inner membrane protein ytfF 2401850..2402815 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472117.1 CDS CFSAN001992_11885 NC_020307.1 2402918 2403580 D COG2846 Regulator of cell morphogenesis and NO signaling; iron-sulfur cluster repair di-iron protein 2402918..2403580 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472118.1 CDS CFSAN001992_11890 NC_020307.1 2403692 2405101 R COG1113 Gamma-aminobutyrate permease and related permeases; D-alanine/D-serine/glycine permease complement(2403692..2405101) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472119.1 CDS CFSAN001992_11895 NC_020307.1 2405397 2406017 R COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; peptidyl-prolyl cis-trans isomerase complement(2405397..2406017) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472120.1 CDS CFSAN001992_11900 NC_020307.1 2406237 2406872 D COG3061 Cell envelope opacity-associated protein A; cell envelope opacity-associated protein 2406237..2406872 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472121.1 CDS CFSAN001992_11905 NC_020307.1 2406922 2407848 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; putative transporter ybhF complement(2406922..2407848) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472122.1 CDS rplI NC_020307.1 2407996 2408445 R COG0359 Ribosomal protein L9; 50S ribosomal protein L9 complement(2407996..2408445) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472123.1 CDS CFSAN001992_11915 NC_020307.1 2408487 2408714 R COG0238 Ribosomal protein S18; 30S ribosomal protein S18 complement(2408487..2408714) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472124.1 CDS CFSAN001992_11920 NC_020307.1 2408719 2409033 R COG2965 Primosomal replication protein N; primosomal replication protein N complement(2408719..2409033) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472125.1 CDS rpsF NC_020307.1 2409040 2409435 R COG0360 Ribosomal protein S6; 30S ribosomal protein S6 complement(2409040..2409435) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472126.1 CDS CFSAN001992_11930 NC_020307.1 2409822 2410097 D hypothetical protein 2409822..2410097 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472127.1 CDS CFSAN001992_11935 NC_020307.1 2410150 2410707 R COG3477 Predicted periplasmic/secreted protein; Inner membrane protein yagU complement(2410150..2410707) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472128.1 CDS sgaE NC_020307.1 2410795 2411481 R COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-ribulose-5-phosphate 4-epimerase complement(2410795..2411481) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472129.1 CDS CFSAN001992_11945 NC_020307.1 2411481 2412335 R COG3623 Putative L-xylulose-5-phosphate 3-epimerase; L-xylulose 5-phosphate 3-epimerase complement(2411481..2412335) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472130.1 CDS ulaD NC_020307.1 2412345 2412995 R COG0269 3-hexulose-6-phosphate synthase and related proteins; 3-keto-L-gulonate-6-phosphate decarboxylase complement(2412345..2412995) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472131.1 CDS CFSAN001992_11955 NC_020307.1 2413009 2413473 R COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS system L-ascorbate-specific transporter subunit IIA complement(2413009..2413473) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472132.1 CDS CFSAN001992_11960 NC_020307.1 2413483 2413788 R COG3414 Phosphotransferase system, galactitol-specific IIB component; PTS system L-ascorbate-specific transporter subunit IIB complement(2413483..2413788) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472133.1 CDS ulaA NC_020307.1 2413804 2415201 R COG3037 Uncharacterized protein conserved in bacteria; PTS system ascorbate-specific transporter subunit IIC complement(2413804..2415201) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472134.1 CDS CFSAN001992_11970 NC_020307.1 2415564 2416628 D COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold; L-ascorbate 6-phosphate lactonase 2415564..2416628 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472135.1 CDS CFSAN001992_11975 NC_020307.1 2416733 2417488 D COG1349 Transcriptional regulators of sugar metabolism; transcriptional repressor UlaR 2416733..2417488 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472136.1 CDS CFSAN001992_11980 NC_020307.1 2417485 2418234 R COG1073 Hydrolases of the alpha/beta superfamily; esterase complement(2417485..2418234) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472137.1 CDS CFSAN001992_11985 NC_020307.1 2418418 2418747 D biofilm stress and motility protein A 2418418..2418747 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472138.1 CDS CFSAN001992_11990 NC_020307.1 2418878 2419153 D putative inner membrane protein 2418878..2419153 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472139.1 CDS CFSAN001992_11995 NC_020307.1 2419198 2420820 R COG1960 Acyl-CoA dehydrogenases; isovaleryl CoA dehydrogenase complement(2419198..2420820) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472140.1 CDS CFSAN001992_12000 NC_020307.1 2420905 2422068 R COG0754 Glutathionylspermidine synthase; hypothetical protein complement(2420905..2422068) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472141.1 CDS CFSAN001992_12005 NC_020307.1 2422071 2422709 R inner membrane protein complement(2422071..2422709) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472142.1 CDS CFSAN001992_12010 NC_020307.1 2422719 2423117 R COG3766 Predicted membrane protein; inner membrane protein complement(2422719..2423117) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472143.1 CDS CFSAN001992_12015 NC_020307.1 2423135 2423794 R hypothetical protein complement(2423135..2423794) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472144.1 CDS CFSAN001992_12020 NC_020307.1 2424027 2424725 R COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription; PspA/IM30 family protein complement(2424027..2424725) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472145.1 CDS CFSAN001992_12025 NC_020307.1 2424740 2425144 R COG3789 Uncharacterized protein conserved in bacteria; cytoplasmic protein complement(2424740..2425144) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472146.1 CDS CFSAN001992_12030 NC_020307.1 2425276 2426007 R COG0566 rRNA methylases; 23S rRNA (guanosine-2'-O-)-methyltransferase complement(2425276..2426007) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472147.1 CDS CFSAN001992_12035 NC_020307.1 2426098 2428536 R COG0557 Exoribonuclease R; exoribonuclease R complement(2426098..2428536) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472148.1 CDS CFSAN001992_12040 NC_020307.1 2428574 2428999 R COG1959 Predicted transcriptional regulator; transcriptional repressor NsrR complement(2428574..2428999) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472149.1 CDS CFSAN001992_12045 NC_020307.1 2429219 2430517 R COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase complement(2429219..2430517) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472150.1 CDS CFSAN001992_12050 NC_020307.1 2430620 2430817 R COG3242 Uncharacterized protein conserved in bacteria; inner membrane protein complement(2430620..2430817) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472151.1 CDS CFSAN001992_12055 NC_020307.1 2430896 2431900 R COG0330 Membrane protease subunits, stomatin/prohibitin homologs; FtsH protease regulator HflC complement(2430896..2431900) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472152.1 CDS CFSAN001992_12060 NC_020307.1 2431903 2433162 R COG0330 Membrane protease subunits, stomatin/prohibitin homologs; FtsH protease regulator HflK complement(2431903..2433162) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472153.1 CDS CFSAN001992_12065 NC_020307.1 2433377 2434657 R COG2262 GTPases; GTPase HflX complement(2433377..2434657) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472154.1 CDS hfq NC_020307.1 2434729 2435037 R COG1923 Uncharacterized host factor I protein; RNA-binding protein Hfq complement(2434729..2435037) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472155.1 CDS miaA NC_020307.1 2435120 2436070 R COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(2435120..2436070) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472156.1 CDS mutL NC_020307.1 2436063 2437919 R COG0323 DNA mismatch repair enzyme (predicted ATPase); DNA mismatch repair protein complement(2436063..2437919) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472157.1 CDS CFSAN001992_12085 NC_020307.1 2437929 2439248 R COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase II complement(2437929..2439248) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472158.1 CDS CFSAN001992_12090 NC_020307.1 2439265 2439726 R COG0802 Predicted ATPase or kinase; ADP-binding protein complement(2439265..2439726) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472159.1 CDS CFSAN001992_12095 NC_020307.1 2439698 2441245 R COG0062 Uncharacterized conserved protein; carbohydrate kinase complement(2439698..2441245) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472160.1 CDS CFSAN001992_12100 NC_020307.1 2441244 2442383 D COG1600 Uncharacterized Fe-S protein; 4Fe-4S binding protein 2441244..2442383 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472161.1 CDS CFSAN001992_12105 NC_020307.1 2443348 2444088 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; arginine-binding periplasmic protein 2443348..2444088 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472162.1 CDS CFSAN001992_12110 NC_020307.1 2444150 2444695 R COG1949 Oligoribonuclease (3'->5' exoribonuclease); oligoribonuclease complement(2444150..2444695) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472163.1 CDS CFSAN001992_12115 NC_020307.1 2444802 2445854 D COG1162 Predicted GTPases; GTPase RsgA 2444802..2445854 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472164.1 CDS psd NC_020307.1 2445946 2446914 D COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase 2445946..2446914 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472165.1 CDS CFSAN001992_12125 NC_020307.1 2446933 2450259 D COG3264 Small-conductance mechanosensitive channel; mechanosensitive channel protein 2446933..2450259 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472166.1 CDS CFSAN001992_12130 NC_020307.1 2450321 2451823 R COG0531 Amino acid transporters; inner membrane transporter YjeM complement(2450321..2451823) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472167.1 CDS CFSAN001992_12135 NC_020307.1 2452049 2453026 R COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II); poxB regulator PoxA complement(2452049..2453026) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472168.1 CDS CFSAN001992_12140 NC_020307.1 2453349 2455139 D COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase flavoprotein subunit 2453349..2455139 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472169.1 CDS CFSAN001992_12145 NC_020307.1 2455132 2455866 D COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; fumarate reductase iron-sulfur subunit 2455132..2455866 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472170.1 CDS CFSAN001992_12150 NC_020307.1 2455877 2456272 D COG3029 Fumarate reductase subunit C; fumarate reductase subunit C 2455877..2456272 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472171.1 CDS CFSAN001992_12155 NC_020307.1 2456283 2456642 D COG3080 Fumarate reductase subunit D; fumarate reductase subunit D 2456283..2456642 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472172.1 CDS CFSAN001992_12160 NC_020307.1 2456753 2457286 D COG3040 Bacterial lipocalin; outer membrane lipoprotein Blc 2456753..2457286 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472173.1 CDS CFSAN001992_12165 NC_020307.1 2457303 2457620 R COG2076 Membrane transporters of cations and cationic drugs; multidrug efflux system protein complement(2457303..2457620) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472174.1 CDS CFSAN001992_12170 NC_020307.1 2457876 2458463 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional regulator 2457876..2458463 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472175.1 CDS CFSAN001992_12175 NC_020307.1 2458494 2458640 R COG5510 Predicted small secreted protein; entericidin B membrane lipoprotein complement(2458494..2458640) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472176.1 CDS CFSAN001992_12180 NC_020307.1 2458748 2458882 R entericidin A complement(2458748..2458882) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472177.1 CDS CFSAN001992_12185 NC_020307.1 2458943 2459509 R COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P complement(2458943..2459509) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472178.1 CDS CFSAN001992_12190 NC_020307.1 2459550 2460578 D COG1509 Lysine 2,3-aminomutase; KamA family protein 2459550..2460578 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472179.1 CDS CFSAN001992_12195 NC_020307.1 2460859 2461716 D hypothetical protein 2460859..2461716 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472180.1 CDS CFSAN001992_12200 NC_020307.1 2461764 2462117 R hypothetical protein complement(2461764..2462117) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472181.1 CDS groEL NC_020307.1 2462361 2464007 R COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL complement(2462361..2464007) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472182.1 CDS CFSAN001992_12210 NC_020307.1 2464051 2464344 R COG0234 Co-chaperonin GroES (HSP10); 10 kDa chaperonin complement(2464051..2464344) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472183.1 CDS CFSAN001992_12215 NC_020307.1 2464620 2465861 D COG0531 Amino acid transporters; transporter 2464620..2465861 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472184.1 CDS fxsA NC_020307.1 2465920 2466396 R COG3030 Protein affecting phage T7 exclusion by the F plasmid; phage T7 F exclusion suppressor FxsA complement(2465920..2466396) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472185.1 CDS aspA NC_020307.1 2466737 2468173 D COG1027 Aspartate ammonia-lyase; aspartate ammonia-lyase 2466737..2468173 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472186.1 CDS CFSAN001992_12230 NC_020307.1 2468288 2469589 D COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter 2468288..2469589 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472187.1 CDS CFSAN001992_12235 NC_020307.1 2469710 2470057 D COG1324 Uncharacterized protein involved in tolerance to divalent cations; divalent-cation tolerance protein CutA 2469710..2470057 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472188.1 CDS dipZ NC_020307.1 2470033 2471736 D COG4232 Thiol:disulfide interchange protein; thiol:disulfide interchange protein precursor 2470033..2471736 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472189.1 CDS CFSAN001992_12245 NC_020307.1 2471773 2472348 D COG1309 Transcriptional regulator; transcriptional regulator 2471773..2472348 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472190.1 CDS CFSAN001992_12250 NC_020307.1 2472708 2472851 R hypothetical protein complement(2472708..2472851) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472191.1 CDS CFSAN001992_12255 NC_020307.1 2473250 2474002 D COG0671 Membrane-associated phospholipid phosphatase; nonspecific acid phosphatase 2473250..2474002 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472192.1 CDS CFSAN001992_12260 NC_020307.1 2474147 2474995 R COG3204 Uncharacterized protein conserved in bacteria; outer membrane protein complement(2474147..2474995) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472193.1 CDS CFSAN001992_12265 NC_020307.1 2475200 2475769 R COG3121 P pilus assembly protein, chaperone PapD; chaperone protein ClpE complement(2475200..2475769) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472194.1 CDS CFSAN001992_12270 NC_020307.1 2475783 2477231 R COG3188 P pilus assembly protein, porin PapC; fimbrial outer membrane usher protein PefC complement(2475783..2477231) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472195.1 CDS CFSAN001992_12275 NC_020307.1 2477818 2477931 D hypothetical protein 2477818..2477931 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472196.1 CDS CFSAN001992_12280 NC_020307.1 2478111 2478578 R integrase, catalytic region complement(2478111..2478578) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472197.1 CDS CFSAN001992_12285 NC_020307.1 2478782 2479273 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase, gnat family protein complement(2478782..2479273) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472198.1 CDS CFSAN001992_12290 NC_020307.1 2479270 2479563 R COG4453 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2479270..2479563) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472199.1 CDS CFSAN001992_12295 NC_020307.1 2480105 2480230 R hypothetical protein complement(2480105..2480230) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472200.1 CDS CFSAN001992_12300 NC_020307.1 2480367 2481242 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 2480367..2481242 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472201.1 CDS CFSAN001992_12305 NC_020307.1 2481254 2481526 D COG2771 DNA-binding HTH domain-containing proteins; Transcriptional regulatory protein fixJ 2481254..2481526 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472202.1 CDS CFSAN001992_12310 NC_020307.1 2481519 2481701 R 50S ribosome-binding GTPase complement(2481519..2481701) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472203.1 CDS CFSAN001992_12315 NC_020307.1 2482359 2483264 R COG3204 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2482359..2483264) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472204.1 CDS CFSAN001992_12320 NC_020307.1 2483568 2484968 D hypothetical protein 2483568..2484968 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472205.1 CDS CFSAN001992_12325 NC_020307.1 2485052 2485645 R COG3381 Uncharacterized component of anaerobic dehydrogenases; oxidoreductase component complement(2485052..2485645) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472206.1 CDS CFSAN001992_12330 NC_020307.1 2485721 2486494 R COG3302 DMSO reductase anchor subunit; putative dimethyl sulfoxide reductase subunit C complement(2485721..2486494) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472207.1 CDS CFSAN001992_12335 NC_020307.1 2486487 2487113 R COG0437 Fe-S-cluster-containing hydrogenase components 1; anaerobic dimethyl sulfoxide reductase subunit B complement(2486487..2487113) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472208.1 CDS CFSAN001992_12340 NC_020307.1 2487127 2489556 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; anaerobic dimethyl sulfoxide reductase chain a complement(2487127..2489556) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472209.1 CDS CFSAN001992_12355 NC_020307.1 2491558 2492277 D COG4565 Response regulator of citrate/malate metabolism; DNA-binding transcriptional activator DcuR 2491558..2492277 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472210.1 CDS CFSAN001992_12360 NC_020307.1 2493008 2494348 D COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter 2493008..2494348 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472211.1 CDS CFSAN001992_12365 NC_020307.1 2494444 2496090 D COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; fumarate hydratase FumB 2494444..2496090 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472212.1 CDS CFSAN001992_12370 NC_020307.1 2496179 2497609 R COG2211 Na+/melibiose symporter and related transporters; melibiose:sodium symporter complement(2496179..2497609) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472213.1 CDS CFSAN001992_12375 NC_020307.1 2497693 2499048 R COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases; alpha-galactosidase complement(2497693..2499048) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472214.1 CDS CFSAN001992_12380 NC_020307.1 2499317 2500249 D COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator MelR 2499317..2500249 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472215.1 CDS CFSAN001992_12385 NC_020307.1 2500479 2502749 D COG1982 Arginine/lysine/ornithine decarboxylases; arginine decarboxylase 2500479..2502749 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472216.1 CDS CFSAN001992_12390 NC_020307.1 2503047 2503808 D COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional activator AdiY 2503047..2503808 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472217.1 CDS CFSAN001992_12395 NC_020307.1 2503948 2505285 D COG0531 Amino acid transporters; arginine:agmatin antiporter 2503948..2505285 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472218.1 CDS CFSAN001992_12400 NC_020307.1 2505419 2507062 D COG2194 Predicted membrane-associated, metal-dependent hydrolase; metal dependent hydrolase 2505419..2507062 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472219.1 CDS CFSAN001992_12405 NC_020307.1 2507059 2507727 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator BasR 2507059..2507727 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472220.1 CDS CFSAN001992_12410 NC_020307.1 2507728 2508807 D COG0642 Signal transduction histidine kinase; sensor protein BasS/PmrB 2507728..2508807 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472221.1 CDS CFSAN001992_12415 NC_020307.1 2508815 2508904 R hypothetical protein complement(2508815..2508904) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472222.1 CDS CFSAN001992_12420 NC_020307.1 2508974 2510476 R COG0477 Permeases of the major facilitator superfamily; proline/glycine betaine transporter complement(2508974..2510476) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472223.1 CDS CFSAN001992_12425 NC_020307.1 2510944 2511279 D COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; hypothetical protein 2510944..2511279 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472224.1 CDS CFSAN001992_12430 NC_020307.1 2511399 2511842 D COG2764 Uncharacterized protein conserved in bacteria; hypothetical protein 2511399..2511842 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472225.1 CDS CFSAN001992_12435 NC_020307.1 2511994 2512428 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; aminoalkylphosphonic acid N-acetyltransferase 2511994..2512428 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472226.1 CDS CFSAN001992_12440 NC_020307.1 2512686 2513594 D COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases; membrane-bound beta-hydroxylase 2512686..2513594 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472227.1 CDS CFSAN001992_12445 NC_020307.1 2513966 2514385 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-H subunit alpha 2513966..2514385 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472228.1 CDS CFSAN001992_12450 NC_020307.1 2514434 2516113 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-H subunit alpha 2514434..2516113 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472229.1 CDS CFSAN001992_12455 NC_020307.1 2516290 2516979 D COG0790 FOG: TPR repeat, SEL1 subfamily; tetratricopeptide repeat protein 2516290..2516979 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472230.1 CDS gltP NC_020307.1 2517137 2518447 R COG1301 Na+/H+-dicarboxylate symporters; glutamate/aspartate:proton symporter complement(2517137..2518447) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472231.1 CDS CFSAN001992_12465 NC_020307.1 2518792 2519412 R COG4235 Cytochrome c biogenesis factor; formate-dependent nitrite reductase complex subunit NrfG complement(2518792..2519412) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472232.1 CDS CFSAN001992_12470 NC_020307.1 2519409 2519918 R COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; formate-dependent nitrite reductase complex subunit NrfF complement(2519409..2519918) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472233.1 CDS CFSAN001992_12475 NC_020307.1 2519911 2521578 R COG1138 Cytochrome c biogenesis factor; heme lyase subunit NrfE complement(2519911..2521578) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472234.1 CDS CFSAN001992_12480 NC_020307.1 2521640 2522596 R COG3301 Formate-dependent nitrite reductase, membrane component; formate-dependent nitrite reductase subunit NrfD complement(2521640..2522596) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472235.1 CDS CFSAN001992_12485 NC_020307.1 2522593 2523264 R COG0437 Fe-S-cluster-containing hydrogenase components 1; formate-dependent nitrite reductase subunit NrfC complement(2522593..2523264) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472236.1 CDS CFSAN001992_12490 NC_020307.1 2523261 2523827 R cytochrome c nitrite reductase pentaheme subunit complement(2523261..2523827) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472237.1 CDS nrfA NC_020307.1 2523939 2525375 R COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; cytochrome c nitrite reductase subunit c552 complement(2523939..2525375) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472238.1 CDS CFSAN001992_12500 NC_020307.1 2525807 2527765 D COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; acetyl-CoA synthetase 2525807..2527765 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472239.1 CDS CFSAN001992_12505 NC_020307.1 2528005 2528319 D COG3162 Predicted membrane protein; hypothetical protein 2528005..2528319 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472240.1 CDS actP NC_020307.1 2528316 2529965 D COG4147 Predicted symporter; acetate permease 2528316..2529965 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472241.1 CDS CFSAN001992_12515 NC_020307.1 2530004 2530693 R COG1346 Putative effector of murein hydrolase; hypothetical protein complement(2530004..2530693) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472242.1 CDS CFSAN001992_12520 NC_020307.1 2530686 2531096 R COG1380 Putative effector of murein hydrolase LrgA; hypothetical protein complement(2530686..2531096) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472243.1 CDS CFSAN001992_12525 NC_020307.1 2531200 2532087 D COG0583 Transcriptional regulator; LysR family regulatory protein 2531200..2532087 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472244.1 CDS CFSAN001992_12530 NC_020307.1 2532182 2533828 R COG0025 NhaP-type Na+/H+ and K+/H+ antiporters; Na+/H+ antiporter complement(2532182..2533828) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472245.1 CDS CFSAN001992_12535 NC_020307.1 2533800 2533985 D hypothetical protein 2533800..2533985 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472246.1 CDS CFSAN001992_12540 NC_020307.1 2533978 2535327 R COG2252 Permeases; inorganic anion transporter, sulfate permease (SulP) family protein complement(2533978..2535327) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472247.1 CDS CFSAN001992_12545 NC_020307.1 2535675 2536343 R COG0625 Glutathione S-transferase; glutathione S-transferase complement(2535675..2536343) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472248.1 CDS CFSAN001992_12550 NC_020307.1 2536636 2537094 R COG0789 Predicted transcriptional regulators; redox-sensitivie transcriptional activator SoxR complement(2536636..2537094) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472249.1 CDS CFSAN001992_12555 NC_020307.1 2537181 2537504 D COG2207 AraC-type DNA-binding domain-containing proteins; DNA-binding transcriptional regulator SoxS 2537181..2537504 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472250.1 CDS CFSAN001992_12560 NC_020307.1 2537492 2539093 R COG4943 Predicted signal transduction protein containing sensor and EAL domains; hypothetical protein complement(2537492..2539093) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472251.1 CDS CFSAN001992_12565 NC_020307.1 2539656 2539937 D hypothetical protein 2539656..2539937 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472252.1 CDS CFSAN001992_12570 NC_020307.1 2540214 2542280 R COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; Lipid A export ATP-binding/permease protein msbA complement(2540214..2542280) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472253.1 CDS CFSAN001992_12575 NC_020307.1 2542320 2559005 R COG1404 Subtilisin-like serine proteases; large repetitive protein complement(2542320..2559005) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472254.1 CDS CFSAN001992_12580 NC_020307.1 2559022 2560299 R COG0845 Membrane-fusion protein; Leukotoxin secretion protein D complement(2559022..2560299) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472255.1 CDS CFSAN001992_12585 NC_020307.1 2560296 2561615 R COG1538 Outer membrane protein; putative ABC exporter outer membrane component complement(2560296..2561615) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472256.1 CDS CFSAN001992_12590 NC_020307.1 2561605 2562993 R integral membrane protein complement(2561605..2562993) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472257.1 CDS CFSAN001992_12595 NC_020307.1 2562990 2563622 R hypothetical protein complement(2562990..2563622) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472258.1 CDS CFSAN001992_12600 NC_020307.1 2564131 2564271 R hypothetical protein complement(2564131..2564271) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472259.1 CDS CFSAN001992_12605 NC_020307.1 2564662 2565189 R COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein complement(2564662..2565189) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472260.1 CDS uvrA NC_020307.1 2565437 2568262 D COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A 2565437..2568262 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472261.1 CDS CFSAN001992_12615 NC_020307.1 2568406 2568849 D hypothetical protein 2568406..2568849 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472262.1 CDS CFSAN001992_12620 NC_020307.1 2568836 2569174 D hypothetical protein 2568836..2569174 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472263.1 CDS CFSAN001992_12625 NC_020307.1 2569175 2569531 R COG2315 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2569175..2569531) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472264.1 CDS CFSAN001992_12630 NC_020307.1 2569534 2569950 R COG0432 Uncharacterized conserved protein; thiamin phosphate synthase complement(2569534..2569950) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472265.1 CDS aphA NC_020307.1 2570079 2570792 R COG3700 Acid phosphatase (class B); acid phosphatase/phosphotransferase complement(2570079..2570792) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472266.1 CDS CFSAN001992_12640 NC_020307.1 2570979 2572172 R COG1448 Aspartate/tyrosine/aromatic aminotransferase; aromatic amino acid aminotransferase complement(2570979..2572172) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472267.1 CDS alr NC_020307.1 2572358 2573437 R COG0787 Alanine racemase; alanine racemase complement(2572358..2573437) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472268.1 CDS CFSAN001992_12650 NC_020307.1 2573469 2574884 R COG0305 Replicative DNA helicase; replicative DNA helicase complement(2573469..2574884) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472269.1 CDS CFSAN001992_12655 NC_020307.1 2574949 2575932 D COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; quinone oxidoreductase, NADPH-dependent 2574949..2575932 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472270.1 CDS pspG NC_020307.1 2576107 2576349 R phage shock protein G complement(2576107..2576349) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472271.1 CDS CFSAN001992_12665 NC_020307.1 2576516 2577514 R COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase A complement(2576516..2577514) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472272.1 CDS CFSAN001992_12670 NC_020307.1 2577602 2578912 R conjugative transfer protein complement(2577602..2578912) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472273.1 CDS CFSAN001992_12675 NC_020307.1 2579159 2579674 D COG0735 Fe2+/Zn2+ uptake regulation proteins; zinc uptake transcriptional repressor 2579159..2579674 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472274.1 CDS CFSAN001992_12680 NC_020307.1 2579774 2579983 R COG3237 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2579774..2579983) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472275.1 CDS CFSAN001992_12685 NC_020307.1 2580115 2581440 R COG0534 Na+-driven multidrug efflux pump; DNA-damage-inducible SOS response protein complement(2580115..2581440) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472276.1 CDS CFSAN001992_12690 NC_020307.1 2581619 2582227 R COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); LexA repressor complement(2581619..2582227) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472277.1 CDS CFSAN001992_12695 NC_020307.1 2582336 2582704 R COG0818 Diacylglycerol kinase; diacylglycerol kinase complement(2582336..2582704) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472278.1 CDS CFSAN001992_12700 NC_020307.1 2582875 2585295 D COG2937 Glycerol-3-phosphate O-acyltransferase; glycerol-3-phosphate acyltransferase 2582875..2585295 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472279.1 CDS ubiA NC_020307.1 2585394 2586266 R COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; 4-hydroxybenzoate octaprenyltransferase complement(2585394..2586266) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472280.1 CDS ubiC NC_020307.1 2586280 2586777 R COG3161 4-hydroxybenzoate synthetase (chorismate lyase); chorismate pyruvate lyase complement(2586280..2586777) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472281.1 CDS CFSAN001992_12715 NC_020307.1 2586958 2587875 R maltose regulon periplasmic protein complement(2586958..2587875) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472282.1 CDS lamB NC_020307.1 2588039 2589397 R COG4580 Maltoporin (phage lambda and maltose receptor); maltoporin complement(2588039..2589397) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472283.1 CDS CFSAN001992_12725 NC_020307.1 2589486 2590595 R COG3839 ABC-type sugar transport systems, ATPase components; maltose/maltodextrin transporter ATP-binding protein complement(2589486..2590595) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472284.1 CDS malE NC_020307.1 2590957 2592147 D COG2182 Maltose-binding periplasmic proteins/domains; maltose ABC transporter periplasmic protein 2590957..2592147 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472285.1 CDS malF NC_020307.1 2592279 2593823 D COG1175 ABC-type sugar transport systems, permease components; maltose transporter membrane protein 2592279..2593823 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472286.1 CDS malG NC_020307.1 2593838 2594728 D COG3833 ABC-type maltose transport systems, permease component; maltose transporter permease 2593838..2594728 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472287.1 CDS CFSAN001992_12745 NC_020307.1 2595048 2595632 D COG0477 Permeases of the major facilitator superfamily; D-xylose transporter XylE 2595048..2595632 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472288.1 CDS CFSAN001992_12750 NC_020307.1 2595653 2596525 D COG0477 Permeases of the major facilitator superfamily; D-xylose transporter XylE 2595653..2596525 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472289.1 CDS CFSAN001992_12755 NC_020307.1 2596571 2596981 R COG3223 Predicted membrane protein; phosphate-starvation-inducible protein PsiE complement(2596571..2596981) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472290.1 CDS CFSAN001992_12760 NC_020307.1 2597124 2599220 R lipoprotein complement(2597124..2599220) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472291.1 CDS CFSAN001992_12765 NC_020307.1 2599220 2599954 R hypothetical protein complement(2599220..2599954) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472292.1 CDS CFSAN001992_12770 NC_020307.1 2599951 2600589 R hypothetical protein complement(2599951..2600589) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472293.1 CDS CFSAN001992_12775 NC_020307.1 2600666 2600824 D hypothetical protein 2600666..2600824 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472294.1 CDS pgi NC_020307.1 2601339 2602988 R COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase complement(2601339..2602988) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472295.1 CDS CFSAN001992_12785 NC_020307.1 2603376 2604725 D COG0527 Aspartokinases; aspartate kinase III 2603376..2604725 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472296.1 CDS CFSAN001992_12790 NC_020307.1 2605103 2606692 D COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific; hypothetical protein 2605103..2606692 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472297.1 CDS CFSAN001992_12795 NC_020307.1 2606716 2607555 D COG0269 3-hexulose-6-phosphate synthase and related proteins; Thiamine-phosphate pyrophosphorylase TMP pyrophosphorylase , TMP-PPase , Thiamine-phosphate synthase 2606716..2607555 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472298.1 CDS CFSAN001992_12800 NC_020307.1 2607572 2608435 D COG0561 Predicted hydrolases of the HAD superfamily; putative hydrolase 2607572..2608435 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472299.1 CDS CFSAN001992_12805 NC_020307.1 2608422 2609180 D COG1349 Transcriptional regulators of sugar metabolism; Glycerol-3-phosphate regulon repressor 2608422..2609180 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472300.1 CDS CFSAN001992_12810 NC_020307.1 2609391 2609663 D hypothetical protein 2609391..2609663 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472301.1 CDS CFSAN001992_12815 NC_020307.1 2609660 2610529 R COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; 23S rRNA pseudouridine synthase F complement(2609660..2610529) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472302.1 CDS CFSAN001992_12830 NC_020307.1 2611322 2612011 D COG3340 Peptidase E; (alpha)-aspartyl dipeptidase 2611322..2612011 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472303.1 CDS CFSAN001992_12835 NC_020307.1 2612086 2613717 R COG1283 Na+/phosphate symporter; hypothetical protein complement(2612086..2613717) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472304.1 CDS metH NC_020307.1 2613984 2617667 R COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain; B12-dependent methionine synthase complement(2613984..2617667) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472305.1 CDS CFSAN001992_12845 NC_020307.1 2617972 2618796 D COG1414 Transcriptional regulator; transcriptional repressor IclR 2617972..2618796 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472306.1 CDS CFSAN001992_12850 NC_020307.1 2618780 2619214 D COG4405 Uncharacterized protein conserved in bacteria; hypothetical protein 2618780..2619214 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472307.1 CDS aceK NC_020307.1 2619178 2620929 R COG4579 Isocitrate dehydrogenase kinase/phosphatase; bifunctional isocitrate dehydrogenase kinase/phosphatase protein complement(2619178..2620929) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472308.1 CDS CFSAN001992_12860 NC_020307.1 2621031 2622335 R COG2224 Isocitrate lyase; isocitrate lyase complement(2621031..2622335) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472309.1 CDS CFSAN001992_12865 NC_020307.1 2622367 2623968 R COG2225 Malate synthase; malate synthase complement(2622367..2623968) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472310.1 CDS CFSAN001992_12870 NC_020307.1 2624237 2625166 R COG1897 Homoserine trans-succinylase; homoserine O-succinyltransferase complement(2624237..2625166) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472311.1 CDS CFSAN001992_12875 NC_020307.1 2625323 2625760 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase 2625323..2625760 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472312.1 CDS purH NC_020307.1 2631730 2633319 D COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2631730..2633319 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472313.1 CDS CFSAN001992_12885 NC_020307.1 2633335 2634624 D COG0151 Phosphoribosylamine-glycine ligase; phosphoribosylamine--glycine ligase 2633335..2634624 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472314.1 CDS CFSAN001992_12890 NC_020307.1 2634621 2635946 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; transcriptional regulatory protein ZraR complement(2634621..2635946) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472315.1 CDS CFSAN001992_12895 NC_020307.1 2635952 2637349 R COG0642 Signal transduction histidine kinase; sensor protein ZraS complement(2635952..2637349) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472316.1 CDS zraP NC_020307.1 2637603 2638058 D zinc resistance protein 2637603..2638058 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472317.1 CDS CFSAN001992_12905 NC_020307.1 2638100 2638792 R hypothetical protein complement(2638100..2638792) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472318.1 CDS CFSAN001992_12910 NC_020307.1 2638804 2639076 R COG0776 Bacterial nucleoid DNA-binding protein; transcriptional regulator HU subunit alpha complement(2638804..2639076) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472319.1 CDS CFSAN001992_12915 NC_020307.1 2639263 2639853 R COG3068 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2639263..2639853) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472320.1 CDS CFSAN001992_12920 NC_020307.1 2639895 2640566 R COG1515 Deoxyinosine 3'endonuclease (endonuclease V); endonuclease V complement(2639895..2640566) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472321.1 CDS hemE NC_020307.1 2640576 2641640 R COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase complement(2640576..2641640) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472322.1 CDS nudC NC_020307.1 2641681 2642454 R COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding; NADH pyrophosphatase complement(2641681..2642454) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472323.1 CDS CFSAN001992_12935 NC_020307.1 2642547 2643035 D COG3160 Regulator of sigma D; anti-RNA polymerase sigma 70 factor 2642547..2643035 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472324.1 CDS CFSAN001992_12940 NC_020307.1 2643399 2645294 D COG0422 Thiamine biosynthesis protein ThiC; phosphomethylpyrimidine synthase ThiC 2643399..2645294 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472325.1 CDS CFSAN001992_12945 NC_020307.1 2645294 2645929 D COG0352 Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 2645294..2645929 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472326.1 CDS CFSAN001992_12950 NC_020307.1 2645922 2646680 D COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; sulfur carrier protein ThiS adenylyltransferase 2645922..2646680 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472327.1 CDS CFSAN001992_12955 NC_020307.1 2646661 2646861 D COG2104 Sulfur transfer protein involved in thiamine biosynthesis; sulfur carrier protein ThiS 2646661..2646861 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472328.1 CDS thiG NC_020307.1 2646863 2647633 D COG2022 Uncharacterized enzyme of thiazole biosynthesis; thiazole synthase 2646863..2647633 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472329.1 CDS thiH NC_020307.1 2647630 2648763 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; thiamine biosynthesis protein ThiH 2647630..2648763 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472330.1 CDS CFSAN001992_12970 NC_020307.1 2649422 2649559 D hypothetical protein 2649422..2649559 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472331.1 CDS CFSAN001992_12975 NC_020307.1 2649859 2650140 R hypothetical protein complement(2649859..2650140) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472332.1 CDS CFSAN001992_12980 NC_020307.1 2650227 2654450 R COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit; DNA-directed RNA polymerase subunit beta' complement(2650227..2654450) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472333.1 CDS rpoB NC_020307.1 2654527 2658555 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-directed RNA polymerase subunit beta complement(2654527..2658555) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472334.1 CDS rplL NC_020307.1 2658873 2659238 R COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(2658873..2659238) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472335.1 CDS rplJ NC_020307.1 2659305 2659802 R COG0244 Ribosomal protein L10; 50S ribosomal protein L10 complement(2659305..2659802) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472336.1 CDS rplA NC_020307.1 2660218 2660922 R COG0081 Ribosomal protein L1; 50S ribosomal protein L1 complement(2660218..2660922) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472337.1 CDS CFSAN001992_13005 NC_020307.1 2660926 2661354 R COG0080 Ribosomal protein L11; 50S ribosomal protein L11 complement(2660926..2661354) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472338.1 CDS nusG NC_020307.1 2661512 2662057 R COG0250 Transcription antiterminator; transcription antitermination protein NusG complement(2661512..2662057) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472339.1 CDS secE NC_020307.1 2662059 2662442 R COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE complement(2662059..2662442) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472340.1 CDS CFSAN001992_13020 NC_020307.1 2662672 2663856 R COG0050 GTPases - translation elongation factors; elongation factor Tu complement(2662672..2663856) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472341.1 CDS CFSAN001992_13025 NC_020307.1 2664815 2665765 D COG1072 Panthothenate kinase; pantothenate kinase 2664815..2665765 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472342.1 CDS CFSAN001992_13030 NC_020307.1 2665800 2666762 R COG1654 Biotin operon repressor; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor complement(2665800..2666762) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472343.1 CDS murB NC_020307.1 2666759 2667787 R COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(2666759..2667787) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472344.1 CDS CFSAN001992_13040 NC_020307.1 2673754 2674605 R COG0796 Glutamate racemase; glutamate racemase complement(2673754..2674605) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472345.1 CDS btuB NC_020307.1 2674550 2676394 R COG4206 Outer membrane cobalamin receptor protein; vitamin B12/cobalamin outer membrane transporter complement(2674550..2676394) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472346.1 CDS CFSAN001992_13050 NC_020307.1 2676768 2677868 D COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; tRNA (uracil-5-)-methyltransferase 2676768..2677868 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472347.1 CDS CFSAN001992_13055 NC_020307.1 2677915 2678274 R COG1882 Pyruvate-formate lyase; hypothetical protein complement(2677915..2678274) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472348.1 CDS CFSAN001992_13060 NC_020307.1 2678290 2678922 R COG1309 Transcriptional regulator; DNA-binding transcriptional repressor FabR complement(2678290..2678922) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472349.1 CDS CFSAN001992_13065 NC_020307.1 2679124 2680524 D COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; soluble pyridine nucleotide transhydrogenase 2679124..2680524 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472350.1 CDS CFSAN001992_13070 NC_020307.1 2680507 2681424 R COG0583 Transcriptional regulator; DNA-binding transcriptional regulator OxyR complement(2680507..2681424) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472351.1 CDS CFSAN001992_13075 NC_020307.1 2681708 2683084 R COG0165 Argininosuccinate lyase; argininosuccinate lyase complement(2681708..2683084) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472352.1 CDS CFSAN001992_13080 NC_020307.1 2683202 2683975 R COG0548 Acetylglutamate kinase; acetylglutamate kinase complement(2683202..2683975) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472353.1 CDS argC NC_020307.1 2683986 2684990 R COG0002 Acetylglutamate semialdehyde dehydrogenase; N-acetyl-gamma-glutamyl-phosphate reductase complement(2683986..2684990) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472354.1 CDS CFSAN001992_13090 NC_020307.1 2685079 2686230 D COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; acetylornithine deacetylase 2685079..2686230 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472355.1 CDS CFSAN001992_13095 NC_020307.1 2686599 2689250 D COG2352 Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 2686599..2689250 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472356.1 CDS CFSAN001992_13100 NC_020307.1 2689461 2691194 D COG2194 Predicted membrane-associated, metal-dependent hydrolase; hypothetical protein 2689461..2691194 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472357.1 CDS CFSAN001992_13105 NC_020307.1 2691355 2692206 D COG2207 AraC-type DNA-binding domain-containing proteins; AraC family transcriptional regulator 2691355..2692206 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472358.1 CDS CFSAN001992_13110 NC_020307.1 2692193 2692546 R COG1445 Phosphotransferase system fructose-specific component IIB; PTS system fructose-like transporter subunit EIIB complement(2692193..2692546) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472359.1 CDS CFSAN001992_13115 NC_020307.1 2692548 2693426 R COG1180 Pyruvate-formate lyase-activating enzyme; pyruvate formate lyase II activase complement(2692548..2693426) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472360.1 CDS pflD NC_020307.1 2693392 2695689 R COG1882 Pyruvate-formate lyase; formate acetyltransferase 2 complement(2693392..2695689) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472361.1 CDS CFSAN001992_13125 NC_020307.1 2695788 2696108 R COG1445 Phosphotransferase system fructose-specific component IIB; PTS system fructose-like transporter subunit EIIB complement(2695788..2696108) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472362.1 CDS CFSAN001992_13130 NC_020307.1 2696123 2697202 R COG1299 Phosphotransferase system, fructose-specific IIC component; PTS system fructose-like transporter subunit EIIC complement(2696123..2697202) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472363.1 CDS CFSAN001992_13135 NC_020307.1 2697511 2700012 D COG1925 Phosphotransferase system, HPr-related proteins; mulitfunctional phosphoenolpyruvate-protein phosphotransferase subunit IIA 2697511..2700012 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472364.1 CDS CFSAN001992_13140 NC_020307.1 2700023 2700685 D COG0176 Transaldolase; fructose-6-phosphate aldolase 2700023..2700685 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472365.1 CDS gldA NC_020307.1 2700697 2701800 D COG0371 Glycerol dehydrogenase and related enzymes; glycerol dehydrogenase 2700697..2701800 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472366.1 CDS CFSAN001992_13150 NC_020307.1 2701907 2704087 R COG0376 Catalase (peroxidase I); catalase/hydroperoxidase HPI(I) complement(2701907..2704087) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472367.1 CDS metF NC_020307.1 2704252 2705142 R COG0685 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase complement(2704252..2705142) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472368.1 CDS CFSAN001992_13170 NC_020307.1 2707028 2708152 D cytoplasmic protein 2707028..2708152 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472369.1 CDS CFSAN001992_13175 NC_020307.1 2708387 2709385 D COG0477 Permeases of the major facilitator superfamily; hypothetical protein 2708387..2709385 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472370.1 CDS CFSAN001992_13180 NC_020307.1 2709388 2710245 D COG0668 Small-conductance mechanosensitive channel; putative inner membrane protein 2709388..2710245 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472371.1 CDS metL NC_020307.1 2710371 2712803 R COG0527 Aspartokinases; bifunctional aspartate kinase II/homoserine dehydrogenase II complement(2710371..2712803) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472372.1 CDS CFSAN001992_13190 NC_020307.1 2712806 2713966 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase complement(2712806..2713966) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472373.1 CDS CFSAN001992_13195 NC_020307.1 2714231 2714548 D COG3060 Transcriptional regulator of met regulon; transcriptional repressor protein MetJ 2714231..2714548 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472374.1 CDS CFSAN001992_13200 NC_020307.1 2715005 2716795 D putative arylsulfate sulfotransferase 2715005..2716795 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472375.1 CDS CFSAN001992_13205 NC_020307.1 2716996 2717658 D hypothetical protein 2716996..2717658 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472376.1 CDS CFSAN001992_13210 NC_020307.1 2717703 2718002 R COG0254 Ribosomal protein L31; hypothetical protein complement(2717703..2718002) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472377.1 CDS CFSAN001992_13215 NC_020307.1 2718119 2720317 D COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA 2718119..2720317 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472378.1 CDS CFSAN001992_13220 NC_020307.1 2720472 2721497 D COG1609 Transcriptional regulators; DNA-binding transcriptional regulator CytR 2720472..2721497 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472379.1 CDS CFSAN001992_13225 NC_020307.1 2721591 2722583 D COG3087 Cell division protein; essential cell division protein FtsN 2721591..2722583 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472380.1 CDS CFSAN001992_13230 NC_020307.1 2722675 2723205 D COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease subunit HslV 2722675..2723205 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472381.1 CDS hslU NC_020307.1 2723215 2724546 D COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU 2723215..2724546 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472382.1 CDS CFSAN001992_13240 NC_020307.1 2724613 2725542 D COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2724613..2725542 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472383.1 CDS CFSAN001992_13245 NC_020307.1 2725635 2726120 D COG0684 Demethylmenaquinone methyltransferase; ribonuclease activity regulator protein RraA 2725635..2726120 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472384.1 CDS CFSAN001992_13250 NC_020307.1 2726342 2726581 R COG3074 Uncharacterized protein conserved in bacteria; septal ring assembly protein ZapB complement(2726342..2726581) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472385.1 CDS CFSAN001992_13255 NC_020307.1 2726980 2727825 D COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); glycerol uptake facilitator GlpF 2726980..2727825 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472386.1 CDS glpK NC_020307.1 2727846 2729354 D COG0554 Glycerol kinase; glycerol kinase 2727846..2729354 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472387.1 CDS glpX NC_020307.1 2729466 2730476 D COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins; fructose 1,6-bisphosphatase II 2729466..2730476 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472388.1 CDS CFSAN001992_13270 NC_020307.1 2730573 2731319 D COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; ferredoxin-NADP reductase 2730573..2731319 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472389.1 CDS CFSAN001992_13275 NC_020307.1 2731426 2731854 R COG3152 Predicted membrane protein; hypothetical protein complement(2731426..2731854) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472390.1 CDS CFSAN001992_13280 NC_020307.1 2731955 2732551 D hypothetical protein 2731955..2732551 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472391.1 CDS tpiA NC_020307.1 2732664 2733431 D COG0149 Triosephosphate isomerase; triosephosphate isomerase 2732664..2733431 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472392.1 CDS CFSAN001992_13290 NC_020307.1 2733523 2734287 R COG0036 Pentose-5-phosphate-3-epimerase; epimerase complement(2733523..2734287) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472393.1 CDS CFSAN001992_13295 NC_020307.1 2734297 2734587 R COG1359 Uncharacterized conserved protein; autoinducer-2 (AI-2) modifying protein LsrG complement(2734297..2734587) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472394.1 CDS CFSAN001992_13300 NC_020307.1 2734670 2735545 R COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes; autoinducer 2 aldolase complement(2734670..2735545) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472395.1 CDS CFSAN001992_13305 NC_020307.1 2735574 2736596 R COG1879 ABC-type sugar transport system, periplasmic component; autoinducer 2-binding protein lsrB complement(2735574..2736596) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472396.1 CDS CFSAN001992_13310 NC_020307.1 2736625 2737623 R COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; autoinducer 2 import system permease LsrD complement(2736625..2737623) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472397.1 CDS CFSAN001992_13315 NC_020307.1 2737623 2738666 R COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; autoinducer 2 ABC transporter permease LsrC complement(2737623..2738666) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472398.1 CDS CFSAN001992_13320 NC_020307.1 2738660 2740195 R COG1129 ABC-type sugar transport system, ATPase component; autoinducer 2 ABC transporter ATP-binding protein LsrA complement(2738660..2740195) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472399.1 CDS CFSAN001992_13325 NC_020307.1 2740451 2741410 D COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain; transcriptional regulator LsrR 2740451..2741410 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472400.1 CDS CFSAN001992_13330 NC_020307.1 2741497 2743089 D COG1070 Sugar (pentulose and hexulose) kinases; autoinducer-2 (AI-2) kinase 2741497..2743089 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472401.1 CDS CFSAN001992_13335 NC_020307.1 2743103 2743453 D COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; polyketide synthase 2743103..2743453 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472402.1 CDS CFSAN001992_13340 NC_020307.1 2743690 2743854 R hypothetical protein complement(2743690..2743854) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472403.1 CDS CFSAN001992_13345 NC_020307.1 2743952 2744674 R COG2188 Transcriptional regulators; GntR family transcriptional regulator complement(2743952..2744674) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472404.1 CDS CFSAN001992_13350 NC_020307.1 2744737 2745777 R COG1397 ADP-ribosylglycohydrolase; [Protein ADP-ribosylarginine] hydrolase-like protein 1 ADP-ribosylhydrolase 2 complement(2744737..2745777) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472405.1 CDS CFSAN001992_13355 NC_020307.1 2745787 2746746 R COG0524 Sugar kinases, ribokinase family; aminoimidazole riboside kinase complement(2745787..2746746) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472406.1 CDS CFSAN001992_13360 NC_020307.1 2746757 2748091 R COG2211 Na+/melibiose symporter and related transporters; sugar (Glycoside-Pentoside-Hexuronide) transporter complement(2746757..2748091) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472407.1 CDS CFSAN001992_13365 NC_020307.1 2748354 2749109 R COG2134 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase complement(2748354..2749109) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472408.1 CDS CFSAN001992_13370 NC_020307.1 2749210 2750199 R COG1613 ABC-type sulfate transport system, periplasmic component; sulfate transporter subunit complement(2749210..2750199) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472409.1 CDS CFSAN001992_13375 NC_020307.1 2750403 2751365 R COG0205 6-phosphofructokinase; 6-phosphofructokinase complement(2750403..2751365) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472410.1 CDS fieF NC_020307.1 2751550 2752452 R COG0053 Predicted Co/Zn/Cd cation transporters; ferrous iron efflux protein F complement(2751550..2752452) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472411.1 CDS cpxP NC_020307.1 2752600 2753100 R COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; periplasmic repressor CpxP complement(2752600..2753100) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472412.1 CDS CFSAN001992_13390 NC_020307.1 2753251 2753949 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator CpxR 2753251..2753949 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472413.1 CDS cpxA NC_020307.1 2753946 2755319 D COG0642 Signal transduction histidine kinase; two-component sensor protein 2753946..2755319 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472414.1 CDS CFSAN001992_13400 NC_020307.1 2755370 2755765 R hypothetical protein complement(2755370..2755765) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472415.1 CDS CFSAN001992_13405 NC_020307.1 2755777 2756466 R COG2258 Uncharacterized protein conserved in bacteria; 6-N-hydroxylaminopurine resistance protein complement(2755777..2756466) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472416.1 CDS CFSAN001992_13410 NC_020307.1 2756536 2757156 R COG0605 Superoxide dismutase; superoxide dismutase complement(2756536..2757156) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472417.1 CDS CFSAN001992_13415 NC_020307.1 2757267 2757461 D hypothetical protein 2757267..2757461 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472418.1 CDS CFSAN001992_13420 NC_020307.1 2757485 2758468 D COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component; hypothetical protein 2757485..2758468 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472419.1 CDS CFSAN001992_13425 NC_020307.1 2758487 2759002 D COG3090 TRAP-type C4-dicarboxylate transport system, small permease component; putative TRAP transporter small permease protein 2758487..2759002 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472420.1 CDS CFSAN001992_13430 NC_020307.1 2758995 2760302 D COG1593 TRAP-type C4-dicarboxylate transport system, large permease component; trap dicarboxylate transporter subunit DctM 2758995..2760302 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472421.1 CDS CFSAN001992_13435 NC_020307.1 2760460 2761131 R hypothetical protein complement(2760460..2761131) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472422.1 CDS CFSAN001992_13440 NC_020307.1 2761168 2761293 R hypothetical protein complement(2761168..2761293) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472423.1 CDS CFSAN001992_13445 NC_020307.1 2761762 2762796 D rhamnose-proton symporter 2761762..2762796 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472424.1 CDS CFSAN001992_13450 NC_020307.1 2762793 2763641 R COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional activator RhaR complement(2762793..2763641) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472425.1 CDS CFSAN001992_13455 NC_020307.1 2763794 2764630 R COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional activator RhaS complement(2763794..2764630) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472426.1 CDS rhaB NC_020307.1 2764918 2766387 D COG1070 Sugar (pentulose and hexulose) kinases; rhamnulokinase 2764918..2766387 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472427.1 CDS CFSAN001992_13465 NC_020307.1 2766384 2767643 D COG4806 L-rhamnose isomerase; L-rhamnose isomerase 2766384..2767643 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472428.1 CDS CFSAN001992_13470 NC_020307.1 2767786 2768613 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; rhamnulose-1-phosphate aldolase 2767786..2768613 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472429.1 CDS CFSAN001992_13475 NC_020307.1 2768740 2769888 D COG1454 Alcohol dehydrogenase, class IV; lactaldehyde reductase 2768740..2769888 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472430.1 CDS CFSAN001992_13480 NC_020307.1 2769885 2770199 D COG3254 Uncharacterized conserved protein; L-rhamnose 1-epimerase 2769885..2770199 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472431.1 CDS CFSAN001992_13485 NC_020307.1 2770288 2770836 R COG1396 Predicted transcriptional regulators; putative HTH-type transcriptional regulator ydcN complement(2770288..2770836) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472432.1 CDS CFSAN001992_13490 NC_020307.1 2770937 2771596 D COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); AzlC family protein 2770937..2771596 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472433.1 CDS CFSAN001992_13495 NC_020307.1 2771596 2771919 D AzlD Branched-chain amino acid transport 2771596..2771919 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472434.1 CDS CFSAN001992_13500 NC_020307.1 2772275 2773375 R hypothetical protein complement(2772275..2773375) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472435.1 CDS CFSAN001992_13505 NC_020307.1 2773568 2774404 R COG1526 Uncharacterized protein required for formate dehydrogenase activity; formate dehydrogenase accessory protein complement(2773568..2774404) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472436.1 CDS CFSAN001992_13510 NC_020307.1 2774599 2775186 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-O major subunit 2774599..2775186 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472437.1 CDS CFSAN001992_13515 NC_020307.1 2775235 2777649 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; formate dehydrogenase-O major subunit 2775235..2777649 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472438.1 CDS CFSAN001992_13520 NC_020307.1 2777662 2778564 D COG0437 Fe-S-cluster-containing hydrogenase components 1; formate dehydrogenase-O Fe-S subunit 2777662..2778564 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472439.1 CDS CFSAN001992_13525 NC_020307.1 2778561 2779196 D COG2864 Cytochrome b subunit of formate dehydrogenase; formate dehydrogenase-O subunit gamma 2778561..2779196 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472440.1 CDS CFSAN001992_13530 NC_020307.1 2779193 2780122 D COG3058 Uncharacterized protein involved in formate dehydrogenase formation; formate dehydrogenase accessory protein FdhE 2779193..2780122 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472441.1 CDS CFSAN001992_13535 NC_020307.1 2780169 2780459 R COG2944 Predicted transcriptional regulator; XRE family transcriptional regulator complement(2780169..2780459) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472442.1 CDS CFSAN001992_13540 NC_020307.1 2780460 2780771 R COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; hypothetical protein complement(2780460..2780771) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472443.1 CDS CFSAN001992_13545 NC_020307.1 2780676 2780795 D hypothetical protein 2780676..2780795 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472444.1 CDS CFSAN001992_13550 NC_020307.1 2780989 2781918 D COG0657 Esterase/lipase; lipase 2780989..2781918 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472445.1 CDS CFSAN001992_13555 NC_020307.1 2782004 2782315 D COG4680 Uncharacterized protein conserved in bacteria; hypothetical protein 2782004..2782315 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472446.1 CDS CFSAN001992_13560 NC_020307.1 2782330 2782758 D COG5499 Predicted transcription regulator containing HTH domain; hypothetical protein 2782330..2782758 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472447.1 CDS CFSAN001992_13565 NC_020307.1 2782773 2783762 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase complement(2782773..2783762) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472448.1 CDS CFSAN001992_13570 NC_020307.1 2783759 2784196 R COG1490 D-Tyr-tRNAtyr deacylase; D-tyrosyl-tRNA(Tyr) deacylase complement(2783759..2784196) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472449.1 CDS CFSAN001992_13575 NC_020307.1 2784193 2785065 R COG1295 Predicted membrane protein; hypothetical protein complement(2784193..2785065) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472450.1 CDS CFSAN001992_13580 NC_020307.1 2785059 2785658 R COG1011 Predicted hydrolase (HAD superfamily); alpha-D-glucose-1-phosphatase complement(2785059..2785658) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472451.1 CDS CFSAN001992_13585 NC_020307.1 2785849 2786652 R COG1349 Transcriptional regulators of sugar metabolism; putative HTH-type transcriptional regulator yihW complement(2785849..2786652) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472452.1 CDS CFSAN001992_13600 NC_020307.1 2787747 2788643 D COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; NADH-dependent gamma-hydroxybutyrate dehydrogenase 2787747..2788643 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472453.1 CDS CFSAN001992_13605 NC_020307.1 2788666 2789544 D COG3684 Tagatose-1,6-bisphosphate aldolase; putative aldolase yihT 2788666..2789544 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472454.1 CDS CFSAN001992_13610 NC_020307.1 2789560 2790801 D COG2942 N-acyl-D-glucosamine 2-epimerase; isomerase 2789560..2790801 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472455.1 CDS CFSAN001992_13615 NC_020307.1 2790805 2791662 D COG2017 Galactose mutarotase and related enzymes; aldose-1-epimerase 2790805..2791662 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472456.1 CDS CFSAN001992_13620 NC_020307.1 2791706 2793742 D COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; alpha-glucosidase 2791706..2793742 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472457.1 CDS CFSAN001992_13625 NC_020307.1 2793788 2795170 D COG2211 Na+/melibiose symporter and related transporters; hypothetical protein 2793788..2795170 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472458.1 CDS CFSAN001992_13630 NC_020307.1 2795216 2796637 D COG2211 Na+/melibiose symporter and related transporters; Melibiose carrier protein Thiomethylgalactoside permease II 2795216..2796637 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472459.1 CDS ompL NC_020307.1 2796705 2797397 D outer membrane porin L 2796705..2797397 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472460.1 CDS CFSAN001992_13640 NC_020307.1 2797554 2798402 D hypothetical protein 2797554..2798402 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472461.1 CDS CFSAN001992_13645 NC_020307.1 2798454 2799440 D COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); periplasmic protein 2798454..2799440 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472462.1 CDS CFSAN001992_13650 NC_020307.1 2799433 2800308 D COG2194 Predicted membrane-associated, metal-dependent hydrolase; membrane-associated metal-dependent hydrolase 2799433..2800308 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472463.1 CDS CFSAN001992_13655 NC_020307.1 2800310 2801551 D COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 2800310..2801551 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472464.1 CDS CFSAN001992_13660 NC_020307.1 2801548 2802426 D COG0535 Predicted Fe-S oxidoreductases; hypothetical protein 2801548..2802426 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472465.1 CDS CFSAN001992_13665 NC_020307.1 2802411 2803145 D COG0561 Predicted hydrolases of the HAD superfamily; hydrolase 2802411..2803145 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472466.1 CDS CFSAN001992_13670 NC_020307.1 2803199 2805022 R COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein complement(2803199..2805022) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472467.1 CDS CFSAN001992_13675 NC_020307.1 2804975 2805070 D hypothetical Protein 2804975..2805070 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472468.1 CDS glnA NC_020307.1 2805398 2806807 D COG0174 Glutamine synthetase; glutamine synthetase 2805398..2806807 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472469.1 CDS glnL NC_020307.1 2807082 2808131 D COG3852 Signal transduction histidine kinase, nitrogen specific; nitrogen regulation protein NR(II) 2807082..2808131 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472470.1 CDS glnG NC_020307.1 2808140 2809549 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; nitrogen regulation protein NR(I) 2808140..2809549 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472471.1 CDS CFSAN001992_13695 NC_020307.1 2809862 2811235 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase complement(2809862..2811235) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472472.1 CDS CFSAN001992_13700 NC_020307.1 2811424 2811939 R COG3078 Uncharacterized protein conserved in bacteria; Der GTPase activator complement(2811424..2811939) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472473.1 CDS CFSAN001992_13705 NC_020307.1 2812058 2812282 R putative cytoplasmic protein complement(2812058..2812282) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472474.1 CDS engB NC_020307.1 2812521 2813153 D COG0218 Predicted GTPase; GTP-binding protein YsxC 2812521..2813153 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472475.1 CDS CFSAN001992_13715 NC_020307.1 2813488 2816274 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I complement(2813488..2816274) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472476.1 CDS CFSAN001992_13720 NC_020307.1 2816661 2817569 D COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; acyltransferase 2816661..2817569 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472477.1 CDS CFSAN001992_13725 NC_020307.1 2817582 2818205 R COG0526 Thiol-disulfide isomerase and thioredoxins; periplasmic protein disulfide isomerase I complement(2817582..2818205) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472478.1 CDS CFSAN001992_13730 NC_020307.1 2818222 2819208 R COG2334 Putative homoserine kinase type II (protein kinase fold); serine/threonine protein kinase complement(2818222..2819208) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472479.1 CDS CFSAN001992_13735 NC_020307.1 2819285 2819554 R COG3084 Uncharacterized protein conserved in bacteria; Protein yihD complement(2819285..2819554) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472480.1 CDS mobA NC_020307.1 2819624 2820208 D COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 2819624..2820208 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472481.1 CDS CFSAN001992_13745 NC_020307.1 2820205 2820729 D COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; molybdopterin-guanine dinucleotide biosynthesis protein B 2820205..2820729 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472482.1 CDS hemG NC_020307.1 2826673 2827218 R COG4635 Flavodoxin; protoporphyrinogen oxidase complement(2826673..2827218) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472483.1 CDS CFSAN001992_13755 NC_020307.1 2827230 2828681 R COG0168 Trk-type K+ transport systems, membrane components; potassium transporter complement(2827230..2828681) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472484.1 CDS CFSAN001992_13760 NC_020307.1 2828720 2829334 R COG1739 Uncharacterized conserved protein; hypothetical protein complement(2828720..2829334) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472485.1 CDS CFSAN001992_13765 NC_020307.1 2829334 2830665 R COG0006 Xaa-Pro aminopeptidase; proline dipeptidase complement(2829334..2830665) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472486.1 CDS fadB NC_020307.1 2830855 2833044 D COG1024 Enoyl-CoA hydratase/carnithine racemase; multifunctional fatty acid oxidation complex subunit alpha 2830855..2833044 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472487.1 CDS fadA NC_020307.1 2833054 2834217 D COG0183 Acetyl-CoA acetyltransferase; 3-ketoacyl-CoA thiolase 2833054..2834217 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472488.1 CDS CFSAN001992_13780 NC_020307.1 2834414 2836237 R arylsulfotransferase complement(2834414..2836237) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472489.1 CDS fre NC_020307.1 2836491 2837192 R COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; FMN reductase complement(2836491..2837192) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472490.1 CDS CFSAN001992_13790 NC_020307.1 2837278 2838747 R COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4-hydroxybenzoate decarboxylase complement(2837278..2838747) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472491.1 CDS rfaH NC_020307.1 2838942 2839430 D COG0250 Transcription antiterminator; transcriptional activator RfaH 2838942..2839430 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472492.1 CDS CFSAN001992_13800 NC_020307.1 2839438 2840220 R COG0084 Mg-dependent DNase; DNase TatD complement(2839438..2840220) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472493.1 CDS CFSAN001992_13805 NC_020307.1 2840262 2841041 R COG0805 Sec-independent protein secretion pathway component TatC; twin-arginine protein translocation system subunit TatC complement(2840262..2841041) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472494.1 CDS CFSAN001992_13810 NC_020307.1 2841044 2841592 R COG1826 Sec-independent protein secretion pathway components; sec-independent translocase complement(2841044..2841592) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472495.1 CDS tatA NC_020307.1 2841596 2841850 R COG1826 Sec-independent protein secretion pathway components; twin arginine translocase protein A complement(2841596..2841850) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472496.1 CDS ubiB NC_020307.1 2842057 2843697 R COG0661 Predicted unusual protein kinase; ubiquinone biosynthesis protein UbiB complement(2842057..2843697) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472497.1 CDS CFSAN001992_13825 NC_020307.1 2843694 2844299 R COG3165 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2843694..2844299) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472498.1 CDS ubiE NC_020307.1 2844309 2845064 R COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase complement(2844309..2845064) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472499.1 CDS CFSAN001992_13835 NC_020307.1 2845160 2846590 R COG1322 Uncharacterized protein conserved in bacteria; DNA recombination protein RmuC complement(2845160..2846590) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472500.1 CDS CFSAN001992_13840 NC_020307.1 2846730 2847491 R COG2820 Uridine phosphorylase; uridine phosphorylase complement(2846730..2847491) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472501.1 CDS CFSAN001992_13845 NC_020307.1 2847750 2848562 D COG0412 Dienelactone hydrolase and related enzymes; dienelactone hydrolase 2847750..2848562 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472502.1 CDS CFSAN001992_13850 NC_020307.1 2848642 2849985 R COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); chondroitin sulfate/heparin utilization regulation protein complement(2848642..2849985) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472503.1 CDS CFSAN001992_13855 NC_020307.1 2850042 2850176 D hypothetical protein 2850042..2850176 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472504.1 CDS CFSAN001992_13860 NC_020307.1 2850320 2852584 R COG0620 Methionine synthase II (cobalamin-independent); 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase complement(2850320..2852584) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472505.1 CDS CFSAN001992_13865 NC_020307.1 2852833 2853786 D COG0583 Transcriptional regulator; DNA-binding transcriptional activator MetR 2852833..2853786 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472506.1 CDS CFSAN001992_13870 NC_020307.1 2853674 2854573 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(2853674..2854573) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472507.1 CDS CFSAN001992_13875 NC_020307.1 2854654 2855454 R COG0561 Predicted hydrolases of the HAD superfamily; hydrolase complement(2854654..2855454) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472508.1 CDS CFSAN001992_13880 NC_020307.1 2855470 2856486 R COG2267 Lysophospholipase; lysophospholipase L2 complement(2855470..2856486) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472509.1 CDS rhtB NC_020307.1 2856597 2857217 D COG1280 Putative threonine efflux protein; homoserine/homoserine lactone efflux protein 2856597..2857217 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472510.1 CDS CFSAN001992_13890 NC_020307.1 2857257 2857877 R COG1280 Putative threonine efflux protein; threonine efflux system complement(2857257..2857877) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472511.1 CDS CFSAN001992_13895 NC_020307.1 2857941 2859770 R COG0514 Superfamily II DNA helicase; ATP-dependent DNA helicase RecQ complement(2857941..2859770) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472512.1 CDS CFSAN001992_13900 NC_020307.1 2859854 2860723 R COG2829 Outer membrane phospholipase A; phospholipase A complement(2859854..2860723) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472513.1 CDS CFSAN001992_13905 NC_020307.1 2860888 2861355 D COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein 2860888..2861355 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472514.1 CDS CFSAN001992_13910 NC_020307.1 2861399 2862286 D COG2962 Predicted permeases; chloramphenical resistance permease RarD 2861399..2862286 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472515.1 CDS CFSAN001992_13915 NC_020307.1 2862326 2862622 R hypothetical protein complement(2862326..2862622) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472516.1 CDS CFSAN001992_13920 NC_020307.1 2862797 2863177 D hypothetical protein 2862797..2863177 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472517.1 CDS CFSAN001992_13925 NC_020307.1 2863225 2864175 R COG0598 Mg2+ and Co2+ transporters; magnesium/nickel/cobalt transporter CorA complement(2863225..2864175) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472518.1 CDS uvrD NC_020307.1 2864647 2866809 R COG0210 Superfamily I DNA and RNA helicases; DNA-dependent helicase II complement(2864647..2866809) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472519.1 CDS CFSAN001992_13935 NC_020307.1 2866945 2867661 R COG1011 Predicted hydrolase (HAD superfamily); flavin mononucleotide phosphatase complement(2866945..2867661) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472520.1 CDS xerC NC_020307.1 2867661 2868563 R COG4973 Site-specific recombinase XerC; site-specific tyrosine recombinase XerC complement(2867661..2868563) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472521.1 CDS CFSAN001992_13945 NC_020307.1 2868560 2869267 R COG3159 Uncharacterized protein conserved in bacteria; hypothetical protein complement(2868560..2869267) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472522.1 CDS dapF NC_020307.1 2869264 2870088 R COG0253 Diaminopimelate epimerase; diaminopimelate epimerase complement(2869264..2870088) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472523.1 CDS CFSAN001992_13955 NC_020307.1 2870125 2870328 R COG5567 Predicted small periplasmic lipoprotein; lipoprotein complement(2870125..2870328) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472524.1 CDS CFSAN001992_13960 NC_020307.1 2870514 2872526 D hypothetical protein 2870514..2872526 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472525.1 CDS CFSAN001992_13965 NC_020307.1 2872505 2872894 D hypothetical protein 2872505..2872894 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472526.1 CDS cyaY NC_020307.1 2872964 2873284 D COG1965 Protein implicated in iron transport, frataxin homolog; frataxin-like protein 2872964..2873284 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472527.1 CDS CFSAN001992_13975 NC_020307.1 2873730 2874272 R hypothetical protein complement(2873730..2874272) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472528.1 CDS CFSAN001992_13980 NC_020307.1 2874458 2874811 R putative inner membrane protein complement(2874458..2874811) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472529.1 CDS cyaA NC_020307.1 2874919 2877465 R COG3072 Adenylate cyclase; adenylate cyclase complement(2874919..2877465) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472530.1 CDS hemC NC_020307.1 2877842 2878783 D COG0181 Porphobilinogen deaminase; porphobilinogen deaminase 2877842..2878783 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472531.1 CDS hemD NC_020307.1 2878780 2879520 D COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 2878780..2879520 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472532.1 CDS CFSAN001992_14000 NC_020307.1 2879542 2880711 D COG2959 Uncharacterized enzyme of heme biosynthesis; uroporphyrinogen III C-methyltransferase 2879542..2880711 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472533.1 CDS CFSAN001992_14005 NC_020307.1 2880711 2881910 D COG3071 Uncharacterized enzyme of heme biosynthesis; protoheme IX biogenesis protein 2880711..2881910 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472534.1 CDS CFSAN001992_14010 NC_020307.1 2883026 2884411 R COG1113 Gamma-aminobutyrate permease and related permeases; transport protein YifK complement(2883026..2884411) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472535.1 CDS CFSAN001992_14015 NC_020307.1 2884618 2885358 R COG1922 Teichoic acid biosynthesis proteins; UDP-N-acetyl-D-mannosaminuronic acid transferase complement(2884618..2885358) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472536.1 CDS CFSAN001992_14020 NC_020307.1 2885355 2886713 R common antigen polymerase complement(2885355..2886713) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472537.1 CDS CFSAN001992_14025 NC_020307.1 2886710 2887789 R 4-alpha-L-fucosyltransferase complement(2886710..2887789) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472538.1 CDS CFSAN001992_14030 NC_020307.1 2887786 2889036 R COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; O-antigen translocase complement(2887786..2889036) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472539.1 CDS CFSAN001992_14035 NC_020307.1 2889038 2890168 R COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; TDP-4-oxo-6-deoxy-D-glucose transaminase complement(2889038..2890168) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472540.1 CDS CFSAN001992_14040 NC_020307.1 2890173 2890850 R TDP-fucosamine acetyltransferase complement(2890173..2890850) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472541.1 CDS CFSAN001992_14045 NC_020307.1 2890828 2891052 R COG1209 dTDP-glucose pyrophosphorylase; glucose-1-phosphate thymidylyltransferase complement(2890828..2891052) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472542.1 CDS CFSAN001992_14050 NC_020307.1 2891085 2892152 R COG1088 dTDP-D-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(2891085..2892152) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472543.1 CDS wecC NC_020307.1 2892152 2893414 R COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; UDP-N-acetyl-D-mannosamine dehydrogenase complement(2892152..2893414) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472544.1 CDS CFSAN001992_14060 NC_020307.1 2893411 2894541 R COG0381 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetyl-D-glucosamine 2-epimerase complement(2893411..2894541) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472545.1 CDS CFSAN001992_14065 NC_020307.1 2894597 2895643 R COG3765 Chain length determinant protein; lipopolysaccharide biosynthesis protein WzzE complement(2894597..2895643) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472546.1 CDS CFSAN001992_14070 NC_020307.1 2895655 2896758 R COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase complement(2895655..2896758) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472547.1 CDS rho NC_020307.1 2896988 2898247 R COG1158 Transcription termination factor; transcription termination factor Rho complement(2896988..2898247) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472548.1 CDS trxA NC_020307.1 2898666 2898995 R COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin complement(2898666..2898995) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472549.1 CDS CFSAN001992_14085 NC_020307.1 2899139 2900404 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase RhlB 2899139..2900404 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472550.1 CDS CFSAN001992_14090 NC_020307.1 2900523 2902004 D COG0248 Exopolyphosphatase; guanosine pentaphosphate phosphohydrolase 2900523..2902004 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472551.1 CDS CFSAN001992_14095 NC_020307.1 2902044 2904068 R COG0210 Superfamily I DNA and RNA helicases; ATP-dependent DNA helicase Rep complement(2902044..2904068) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472552.1 CDS CFSAN001992_14100 NC_020307.1 2904168 2904896 R COG3201 Nicotinamide mononucleotide transporter; nicotinamide riboside transporter PnuC complement(2904168..2904896) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472553.1 CDS CFSAN001992_14105 NC_020307.1 2904896 2905639 R COG2820 Uridine phosphorylase; uridine phosphorylase complement(2904896..2905639) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472554.1 CDS CFSAN001992_14110 NC_020307.1 2905668 2906096 R COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; hypothetical protein complement(2905668..2906096) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472555.1 CDS CFSAN001992_14115 NC_020307.1 2906563 2906844 D COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase C 2906563..2906844 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472556.1 CDS CFSAN001992_14120 NC_020307.1 2906936 2908411 R COG0059 Ketol-acid reductoisomerase; ketol-acid reductoisomerase complement(2906936..2908411) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472557.1 CDS CFSAN001992_14125 NC_020307.1 2908575 2909462 D COG0583 Transcriptional regulator; DNA-binding transcriptional regulator IlvY 2908575..2909462 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472558.1 CDS CFSAN001992_14130 NC_020307.1 2909490 2909864 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; secreted protein 2909490..2909864 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472559.1 CDS CFSAN001992_14135 NC_020307.1 2909878 2910252 D hypothetical protein 2909878..2910252 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472560.1 CDS CFSAN001992_14140 NC_020307.1 2910263 2910964 R COG5587 Uncharacterized conserved protein; hypothetical protein complement(2910263..2910964) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472561.1 CDS CFSAN001992_14145 NC_020307.1 2911070 2912614 R COG1171 Threonine dehydratase; threonine dehydratase complement(2911070..2912614) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472562.1 CDS CFSAN001992_14150 NC_020307.1 2912617 2914467 R COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(2912617..2914467) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472563.1 CDS CFSAN001992_14155 NC_020307.1 2914628 2915557 R COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase complement(2914628..2915557) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472564.1 CDS ilvM NC_020307.1 2915575 2915838 R COG3978 Acetolactate synthase (isozyme II), small (regulatory) subunit; acetolactate synthase 2 regulatory subunit complement(2915575..2915838) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472565.1 CDS CFSAN001992_14165 NC_020307.1 2915835 2917481 R COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase 2 catalytic subunit complement(2915835..2917481) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472566.1 CDS CFSAN001992_14170 NC_020307.1 2917799 2917906 R hypothetical protein complement(2917799..2917906) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472567.1 CDS CFSAN001992_14175 NC_020307.1 2918071 2919591 D COG0606 Predicted ATPase with chaperone activity; ATP-dependent protease 2918071..2919591 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472568.1 CDS CFSAN001992_14190 NC_020307.1 2920072 2920908 D COG0583 Transcriptional regulator; transcriptional regulator HdfR 2920072..2920908 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472569.1 CDS CFSAN001992_14195 NC_020307.1 2926716 2927420 D COG2186 Transcriptional regulators; GntR family transcriptional regulator 2926716..2927420 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472570.1 CDS CFSAN001992_14200 NC_020307.1 2927432 2928859 D COG0477 Permeases of the major facilitator superfamily; putative multidrug resistance protein mdtD 2927432..2928859 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472571.1 CDS CFSAN001992_14205 NC_020307.1 2928825 2929823 R COG1609 Transcriptional regulators; transcriptional repressor RbsR complement(2928825..2929823) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472572.1 CDS CFSAN001992_14210 NC_020307.1 2929827 2930756 R COG0524 Sugar kinases, ribokinase family; ribokinase complement(2929827..2930756) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472573.1 CDS CFSAN001992_14215 NC_020307.1 2930889 2931779 R COG1879 ABC-type sugar transport system, periplasmic component; D-ribose transporter subunit RbsB complement(2930889..2931779) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472574.1 CDS rbsC NC_020307.1 2931804 2932769 R COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; ribose ABC transporter permease protein complement(2931804..2932769) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472575.1 CDS CFSAN001992_14225 NC_020307.1 2932775 2934280 R COG1129 ABC-type sugar transport system, ATPase component; D-ribose transporter ATP binding protein complement(2932775..2934280) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472576.1 CDS CFSAN001992_14230 NC_020307.1 2934288 2934707 R COG1869 ABC-type ribose transport system, auxiliary component; D-ribose pyranase complement(2934288..2934707) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472577.1 CDS trkD NC_020307.1 2934924 2936792 R COG3158 K+ transporter; potassium transport protein Kup complement(2934924..2936792) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472578.1 CDS CFSAN001992_14240 NC_020307.1 2937140 2938636 D COG0714 MoxR-like ATPases; regulatory ATPase RavA 2937140..2938636 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472579.1 CDS CFSAN001992_14245 NC_020307.1 2938630 2940081 D COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; hypothetical protein 2938630..2940081 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472580.1 CDS CFSAN001992_14250 NC_020307.1 2940086 2941078 R COG2502 Asparagine synthetase A; asparagine synthetase AsnA complement(2940086..2941078) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472581.1 CDS CFSAN001992_14255 NC_020307.1 2941229 2941687 D COG1522 Transcriptional regulators; DNA-binding transcriptional regulator AsnC 2941229..2941687 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472582.1 CDS CFSAN001992_14260 NC_020307.1 2941777 2942220 D COG0716 Flavodoxins; FMN-binding protein MioC 2941777..2942220 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472583.1 CDS CFSAN001992_14265 NC_020307.1 2942599 2944488 D COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2942599..2944488 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472584.1 CDS gidB NC_020307.1 2944591 2945214 D COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase GidB 2944591..2945214 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472585.1 CDS CFSAN001992_14275 NC_020307.1 2945830 2946210 D COG3312 F0F1-type ATP synthase, subunit I; F0F1 ATP synthase subunit I 2945830..2946210 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472586.1 CDS CFSAN001992_14280 NC_020307.1 2946219 2947034 D COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A 2946219..2947034 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472587.1 CDS CFSAN001992_14285 NC_020307.1 2947081 2947320 D COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C 2947081..2947320 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472588.1 CDS CFSAN001992_14290 NC_020307.1 2947380 2947850 D COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B 2947380..2947850 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472589.1 CDS CFSAN001992_14295 NC_020307.1 2947865 2948398 D COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein); F0F1 ATP synthase subunit delta 2947865..2948398 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472590.1 CDS CFSAN001992_14300 NC_020307.1 2948411 2949952 D COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha 2948411..2949952 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472591.1 CDS CFSAN001992_14305 NC_020307.1 2950003 2950866 D COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma 2950003..2950866 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472592.1 CDS CFSAN001992_14310 NC_020307.1 2950893 2952275 D COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta 2950893..2952275 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472593.1 CDS atpC NC_020307.1 2952296 2952715 D COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon 2952296..2952715 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472594.1 CDS CFSAN001992_14320 NC_020307.1 2952945 2953643 D COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein 2952945..2953643 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472595.1 CDS glmU NC_020307.1 2953963 2955333 D COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 2953963..2955333 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472596.1 CDS CFSAN001992_14330 NC_020307.1 2955522 2957351 D COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase 2955522..2957351 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472597.1 CDS CFSAN001992_14335 NC_020307.1 2957502 2959259 R COG4533 ABC-type uncharacterized transport system, periplasmic component; HTH-type transcriptional regulator SgrR complement(2957502..2959259) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472598.1 CDS CFSAN001992_14350 NC_020307.1 2960222 2961595 D COG1445 Phosphotransferase system fructose-specific component IIB; pts system fructose-specific eiibc component 2960222..2961595 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472599.1 CDS CFSAN001992_14355 NC_020307.1 2961761 2962801 D COG0226 ABC-type phosphate transport system, periplasmic component; phosphate ABC transporter periplasmic substrate-binding protein PstS 2961761..2962801 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472600.1 CDS pstC NC_020307.1 2962937 2963896 D COG0573 ABC-type phosphate transport system, permease component; phosphate transporter permease subunit PstC 2962937..2963896 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472601.1 CDS pstA NC_020307.1 2963896 2964786 D COG0581 ABC-type phosphate transport system, permease component; phosphate transporter permease subunit PtsA 2963896..2964786 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472602.1 CDS pstB NC_020307.1 2964897 2965670 D COG1117 ABC-type phosphate transport system, ATPase component; phosphate transporter ATP-binding protein 2964897..2965670 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472603.1 CDS CFSAN001992_14375 NC_020307.1 2965685 2966410 D COG0704 Phosphate uptake regulator; transcriptional regulator PhoU 2965685..2966410 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472604.1 CDS CFSAN001992_14380 NC_020307.1 2966505 2967170 R COG0637 Predicted phosphatase/phosphohexomutase; 6-phosphogluconate phosphatase complement(2966505..2967170) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472605.1 CDS CFSAN001992_14385 NC_020307.1 2967339 2968676 D COG2252 Permeases; adenine permease PurP 2967339..2968676 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472606.1 CDS CFSAN001992_14390 NC_020307.1 2968721 2969287 R COG0431 Predicted flavoprotein; hypothetical protein complement(2968721..2969287) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472607.1 CDS CFSAN001992_14395 NC_020307.1 2969305 2970060 R COG2091 Phosphopantetheinyl transferase; hypothetical protein complement(2969305..2970060) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472608.1 CDS CFSAN001992_14400 NC_020307.1 2970218 2971177 R COG0583 Transcriptional regulator; DNA-binding transcriptional regulator YidZ complement(2970218..2971177) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472609.1 CDS CFSAN001992_14405 NC_020307.1 2971146 2972333 R COG0477 Permeases of the major facilitator superfamily; multidrug efflux system protein MdtL complement(2971146..2972333) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472610.1 CDS trmE NC_020307.1 2972516 2973880 R COG0486 Predicted GTPase; tRNA modification GTPase TrmE complement(2972516..2973880) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472611.1 CDS CFSAN001992_14415 NC_020307.1 2974022 2975668 R COG0706 Preprotein translocase subunit YidC; membrane protein insertase complement(2974022..2975668) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472612.1 CDS CFSAN001992_14420 NC_020307.1 2975671 2975928 R COG0759 Uncharacterized conserved protein; hypothetical protein complement(2975671..2975928) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472613.1 CDS rnpA NC_020307.1 2975892 2976251 R COG0594 RNase P protein component; ribonuclease P complement(2975892..2976251) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472614.1 CDS CFSAN001992_14430 NC_020307.1 2976268 2976408 R COG0230 Ribosomal protein L34; 50S ribosomal protein L34 complement(2976268..2976408) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472615.1 CDS CFSAN001992_14435 NC_020307.1 2976549 2976707 R hypothetical protein complement(2976549..2976707) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472616.1 CDS dnaA NC_020307.1 2977069 2978469 D COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein 2977069..2978469 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472617.1 CDS CFSAN001992_14445 NC_020307.1 2978474 2979574 D COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 2978474..2979574 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472618.1 CDS recF NC_020307.1 2979722 2980795 D COG1195 Recombinational DNA repair ATPase (RecF pathway); recombination protein F 2979722..2980795 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472619.1 CDS gyrB NC_020307.1 2980824 2983238 D COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B 2980824..2983238 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472620.1 CDS CFSAN001992_14460 NC_020307.1 2983257 2984153 R COG0583 Transcriptional regulator; transcriptional regulator complement(2983257..2984153) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472621.1 CDS CFSAN001992_14465 NC_020307.1 2984268 2985461 R COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; racemase complement(2984268..2985461) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472622.1 CDS CFSAN001992_14470 NC_020307.1 2985475 2986737 R COG0477 Permeases of the major facilitator superfamily; permease complement(2985475..2986737) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472623.1 CDS CFSAN001992_14475 NC_020307.1 2987043 2987855 D COG0561 Predicted hydrolases of the HAD superfamily; sugar phosphate phosphatase 2987043..2987855 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472624.1 CDS CFSAN001992_14480 NC_020307.1 2988057 2989079 D hypothetical protein 2988057..2989079 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472625.1 CDS CFSAN001992_14485 NC_020307.1 2989076 2990215 D COG4775 Outer membrane protein/protective antigen OMA87; outer membrane protein 2989076..2990215 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472626.1 CDS CFSAN001992_14490 NC_020307.1 2990212 2991339 D COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes; hypothetical protein 2990212..2991339 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472627.1 CDS CFSAN001992_14495 NC_020307.1 2991444 2994179 R COG0642 Signal transduction histidine kinase; hybrid sensory histidine kinase TorS complement(2991444..2994179) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472628.1 CDS CFSAN001992_14500 NC_020307.1 2994259 2995299 D COG1879 ABC-type sugar transport system, periplasmic component; TMAO reductase system periplasmic protein TorT 2994259..2995299 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472629.1 CDS CFSAN001992_14505 NC_020307.1 2995272 2995964 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator TorR complement(2995272..2995964) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472630.1 CDS CFSAN001992_14510 NC_020307.1 2996094 2997278 D COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit; trimethylamine N-oxide reductase cytochrome c-type subunit 2996094..2997278 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472631.1 CDS CFSAN001992_14515 NC_020307.1 2997268 2999820 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; trimethylamine N-oxide reductase I catalytic subunit 2997268..2999820 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472632.1 CDS torD NC_020307.1 2999813 3000445 D COG3381 Uncharacterized component of anaerobic dehydrogenases; chaperone protein TorD 2999813..3000445 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472633.1 CDS CFSAN001992_14525 NC_020307.1 3000635 3002035 D COG1858 Cytochrome c peroxidase; cytochrome C peroxidase 3000635..3002035 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472634.1 CDS CFSAN001992_14530 NC_020307.1 3002041 3002658 D COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component; cytochrome c biogenesis protein CcmA 3002041..3002658 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472635.1 CDS CFSAN001992_14535 NC_020307.1 3002655 3003314 D COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme ABC transporter membrane protein CcmB 3002655..3003314 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472636.1 CDS CFSAN001992_14540 NC_020307.1 3003366 3004103 D COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme ABC transporter membrane protein CcmC 3003366..3004103 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472637.1 CDS CFSAN001992_14545 NC_020307.1 3004100 3004312 D COG3114 Heme exporter protein D; cytochrome c biogenesis protein CcmD 3004100..3004312 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472638.1 CDS CFSAN001992_14550 NC_020307.1 3004309 3004788 D COG2332 Cytochrome c-type biogenesis protein CcmE; cytochrome C biogenesis protein CcmE 3004309..3004788 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472639.1 CDS CFSAN001992_14555 NC_020307.1 3004785 3006716 D COG1138 Cytochrome c biogenesis factor; heme lyase subunit CcmF 3004785..3006716 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472640.1 CDS CFSAN001992_14560 NC_020307.1 3006713 3007270 D COG0526 Thiol-disulfide isomerase and thioredoxins; thiol:disulfide interchange protein DsbE 3006713..3007270 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472641.1 CDS CFSAN001992_14565 NC_020307.1 3007267 3008310 D COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; heme lyase subunit CcmH 3007267..3008310 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472642.1 CDS CFSAN001992_14570 NC_020307.1 3008432 3009658 D COG2319 FOG: WD40 repeat; ATP/GTP-binding protein 3008432..3009658 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472643.1 CDS CFSAN001992_14575 NC_020307.1 3009660 3009992 R COG5645 Predicted periplasmic lipoprotein; hypothetical protein complement(3009660..3009992) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472644.1 CDS CFSAN001992_14580 NC_020307.1 3010302 3010715 D COG0071 Molecular chaperone (small heat shock protein); heat shock protein IbpA 3010302..3010715 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472645.1 CDS CFSAN001992_14585 NC_020307.1 3010825 3011253 D COG0071 Molecular chaperone (small heat shock protein); heat shock chaperone IbpB 3010825..3011253 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472646.1 CDS CFSAN001992_14590 NC_020307.1 3011442 3013103 D COG2985 Predicted permease; transporter 3011442..3013103 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472647.1 CDS CFSAN001992_14595 NC_020307.1 3013100 3013246 R hypothetical protein complement(3013100..3013246) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472648.1 CDS CFSAN001992_14600 NC_020307.1 3013256 3013411 R hypothetical protein complement(3013256..3013411) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472649.1 CDS CFSAN001992_14605 NC_020307.1 3013547 3013894 D COG2149 Predicted membrane protein; inner membrane protein 3013547..3013894 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472650.1 CDS CFSAN001992_14610 NC_020307.1 3013884 3014246 D Inner membrane protein yidG 3013884..3014246 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472651.1 CDS CFSAN001992_14615 NC_020307.1 3014243 3014773 D COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); hypothetical protein 3014243..3014773 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472652.1 CDS CFSAN001992_14620 NC_020307.1 3014855 3016177 R COG3048 D-serine dehydratase; D-serine dehydratase complement(3014855..3016177) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472653.1 CDS CFSAN001992_14625 NC_020307.1 3016195 3017532 R COG2610 H+/gluconate symporter and related permeases; permease DsdX complement(3016195..3017532) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472654.1 CDS CFSAN001992_14630 NC_020307.1 3017758 3018681 D COG0583 Transcriptional regulator; DNA-binding transcriptional regulator DsdC 3017758..3018681 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472655.1 CDS CFSAN001992_14635 NC_020307.1 3018745 3019830 D hypothetical protein 3018745..3019830 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472656.1 CDS emrD NC_020307.1 3019757 3020941 R COG0477 Permeases of the major facilitator superfamily; multidrug resistance protein D complement(3019757..3020941) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472657.1 CDS CFSAN001992_14645 NC_020307.1 3021144 3021977 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein complement(3021144..3021977) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472658.1 CDS CFSAN001992_14650 NC_020307.1 3022097 3022186 R toxic peptide TisB complement(3022097..3022186) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472659.1 CDS CFSAN001992_14655 NC_020307.1 3023025 3024713 D COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; acetolactate synthase catalytic subunit 3023025..3024713 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472660.1 CDS CFSAN001992_14660 NC_020307.1 3024717 3025007 D COG0440 Acetolactate synthase, small (regulatory) subunit; acetolactate synthase 1 regulatory subunit 3024717..3025007 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472661.1 CDS CFSAN001992_14665 NC_020307.1 3025009 3025794 R COG1349 Transcriptional regulators of sugar metabolism; deoxyribose operon repressor complement(3025009..3025794) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472662.1 CDS CFSAN001992_14670 NC_020307.1 3026119 3027039 D COG0524 Sugar kinases, ribokinase family; putative carbohydrate kinase 3026119..3027039 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472663.1 CDS CFSAN001992_14675 NC_020307.1 3027070 3028386 D COG0738 Fucose permease; putative glucose/galactose transporter 3027070..3028386 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472664.1 CDS CFSAN001992_14680 NC_020307.1 3028398 3029411 D DeoX 3028398..3029411 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472665.1 CDS CFSAN001992_14685 NC_020307.1 3029486 3030076 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; DNA-binding transcriptional activator UhpA 3029486..3030076 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472666.1 CDS CFSAN001992_14690 NC_020307.1 3030076 3031578 D COG3851 Signal transduction histidine kinase, glucose-6-phosphate specific; sensory histidine kinase UhpB 3030076..3031578 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472667.1 CDS CFSAN001992_14695 NC_020307.1 3031588 3032916 D COG2271 Sugar phosphate permease; regulatory protein UhpC 3031588..3032916 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472668.1 CDS uhpT NC_020307.1 3033059 3034450 D COG2271 Sugar phosphate permease; sugar phosphate antiporter 3033059..3034450 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472669.1 CDS CFSAN001992_14705 NC_020307.1 3034643 3035095 D putative inner membrane protein 3034643..3035095 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472670.1 CDS CFSAN001992_14710 NC_020307.1 3035448 3036191 D COG2188 Transcriptional regulators; GntR family transcriptional regulator 3035448..3036191 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472671.1 CDS CFSAN001992_14715 NC_020307.1 3036209 3036682 D COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 3036209..3036682 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472672.1 CDS CFSAN001992_14720 NC_020307.1 3036679 3036966 D COG3414 Phosphotransferase system, galactitol-specific IIB component; PTS system transporter subunit IIB 3036679..3036966 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472673.1 CDS CFSAN001992_14725 NC_020307.1 3037043 3038401 D COG3775 Phosphotransferase system, galactitol-specific IIC component; PTS system, galactitol-specific IIC component 3037043..3038401 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472674.1 CDS CFSAN001992_14730 NC_020307.1 3038394 3039878 D COG1070 Sugar (pentulose and hexulose) kinases; sugar kinase 3038394..3039878 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472675.1 CDS gatY NC_020307.1 3039941 3040801 D COG0191 Fructose/tagatose bisphosphate aldolase; fructose-1,6-bisphosphate aldolase 3039941..3040801 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472676.1 CDS CFSAN001992_14740 NC_020307.1 3040811 3041080 D COG1925 Phosphotransferase system, HPr-related proteins; Phosphotransferase system HPr enzyme in cluster with fructose-bisphosphate aldolase 3040811..3041080 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472677.1 CDS CFSAN001992_14745 NC_020307.1 3041242 3041403 D hypothetical protein 3041242..3041403 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472678.1 CDS CFSAN001992_14750 NC_020307.1 3041431 3042210 R COG3680 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3041431..3042210) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472679.1 CDS CFSAN001992_14755 NC_020307.1 3042395 3042718 R COG2944 Predicted transcriptional regulator; putative DNA-binding protein complement(3042395..3042718) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472680.1 CDS CFSAN001992_14760 NC_020307.1 3042702 3043061 R COG4737 Uncharacterized protein conserved in bacteria; cytoplasmic protein complement(3042702..3043061) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472681.1 CDS nepI NC_020307.1 3043277 3044470 D COG2814 Arabinose efflux permease; ribonucleoside transporter 3043277..3044470 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472682.1 CDS CFSAN001992_14770 NC_020307.1 3044530 3045912 R COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; beta-glucosidase complement(3044530..3045912) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472683.1 CDS CFSAN001992_14775 NC_020307.1 3046018 3046311 R hypothetical protein complement(3046018..3046311) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472684.1 CDS CFSAN001992_14780 NC_020307.1 3046508 3049306 D COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; Transcriptional regulatory protein levR 3046508..3049306 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472685.1 CDS CFSAN001992_14785 NC_020307.1 3049525 3049950 D COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; PTS system fructose IIA component 3049525..3049950 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472686.1 CDS CFSAN001992_14790 NC_020307.1 3049961 3050446 D COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; PTS system transporter protein 3049961..3050446 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472687.1 CDS CFSAN001992_14795 NC_020307.1 3050592 3051341 D COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; N-acetylgalactosamine permease IIC component 1 3050592..3051341 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472688.1 CDS CFSAN001992_14800 NC_020307.1 3051341 3052198 D COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; Mannose permease IID component PTS system mannose-specific EIID component , EIID-Man , EII-M-Man 3051341..3052198 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472689.1 CDS CFSAN001992_14805 NC_020307.1 3052202 3053311 D COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; pyridoxal phosphate-dependent enzyme 3052202..3053311 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472690.1 CDS CFSAN001992_14810 NC_020307.1 3053298 3054041 D COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; hypothetical protein 3053298..3054041 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472691.1 CDS CFSAN001992_14815 NC_020307.1 3054277 3055218 D hypothetical protein 3054277..3055218 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472692.1 CDS CFSAN001992_14820 NC_020307.1 3055261 3056163 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; carboxylate/amino acid/amine transporter complement(3055261..3056163) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472693.1 CDS CFSAN001992_14825 NC_020307.1 3056670 3057365 D COG1285 Uncharacterized membrane protein; magnesium transport protein MgtC 3056670..3057365 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472694.1 CDS CFSAN001992_14830 NC_020307.1 3057585 3060311 D COG0474 Cation transport ATPase; magnesium-transporting ATPase 3057585..3060311 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472695.1 CDS CFSAN001992_14835 NC_020307.1 3060333 3060425 D hypothetical protein 3060333..3060425 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472696.1 CDS CFSAN001992_14840 NC_020307.1 3060626 3061105 D hypothetical protein 3060626..3061105 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472697.1 CDS CFSAN001992_14845 NC_020307.1 3061273 3061953 R COG1335 Amidases related to nicotinamidase; Nicotinamidase family protein YcaC complement(3061273..3061953) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472698.1 CDS CFSAN001992_14850 NC_020307.1 3062832 3063596 D COG3710 DNA-binding winged-HTH domains; transcriptional regulator 3062832..3063596 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472699.1 CDS CFSAN001992_14855 NC_020307.1 3063607 3064071 D hypothetical protein 3063607..3064071 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472700.1 CDS CFSAN001992_14860 NC_020307.1 3064166 3067033 R COG3468 Type V secretory pathway, adhesin AidA; autotransport protein MisL complement(3064166..3067033) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472701.1 CDS CFSAN001992_14865 NC_020307.1 3067108 3067725 R putative HTH-type transcriptional regulator ykgK complement(3067108..3067725) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472702.1 CDS CFSAN001992_14870 NC_020307.1 3068460 3068591 R COG2801 Transposase and inactivated derivatives; IS1400 transposase A complement(3068460..3068591) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472703.1 CDS CFSAN001992_14875 NC_020307.1 3068738 3068911 D COG2963 Transposase and inactivated derivatives; putative transposase ykgN 3068738..3068911 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472704.1 CDS CFSAN001992_14880 NC_020307.1 3069029 3070051 R COG3943 Virulence protein; hypothetical protein complement(3069029..3070051) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472705.1 CDS CFSAN001992_14895 NC_020307.1 3072285 3072629 D hypothetical protein 3072285..3072629 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472706.1 CDS CFSAN001992_14900 NC_020307.1 3073329 3074711 D COG2211 Na+/melibiose symporter and related transporters; transporter 3073329..3074711 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472707.1 CDS CFSAN001992_14905 NC_020307.1 3074723 3077041 D COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; alpha-glucosidase 3074723..3077041 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472708.1 CDS CFSAN001992_14910 NC_020307.1 3077144 3078853 R AsmA family protein complement(3077144..3078853) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472709.1 CDS CFSAN001992_14915 NC_020307.1 3078974 3080365 R COG2233 Xanthine/uracil permeases; xanthine permease XanP complement(3078974..3080365) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472710.1 CDS CFSAN001992_14920 NC_020307.1 3080593 3081798 D COG0786 Na+/glutamate symporter; sodium/glutamate symport carrier protein GltS 3080593..3081798 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472711.1 CDS CFSAN001992_14925 NC_020307.1 3081834 3083915 R COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG complement(3081834..3083915) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472712.1 CDS CFSAN001992_14930 NC_020307.1 3083921 3084610 R COG0566 rRNA methylases; tRNA guanosine-2'-O-methyltransferase complement(3083921..3084610) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472713.1 CDS CFSAN001992_14935 NC_020307.1 3084615 3086726 R COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase complement(3084615..3086726) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472714.1 CDS CFSAN001992_14940 NC_020307.1 3086745 3087020 R COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega complement(3086745..3087020) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472715.1 CDS gmk NC_020307.1 3087075 3087698 R COG0194 Guanylate kinase; guanylate kinase complement(3087075..3087698) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472716.1 CDS ligB NC_020307.1 3087955 3089640 D COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigB 3087955..3089640 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472717.1 CDS CFSAN001992_14955 NC_020307.1 3089637 3090254 R COG2860 Predicted membrane protein; hypothetical protein complement(3089637..3090254) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472718.1 CDS CFSAN001992_14970 NC_020307.1 3091457 3092359 D COG0583 Transcriptional regulator; regulatory protein 3091457..3092359 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472719.1 CDS CFSAN001992_14975 NC_020307.1 3092409 3093272 R COG1561 Uncharacterized stress-induced protein; hypothetical protein complement(3092409..3093272) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472720.1 CDS rph NC_020307.1 3093398 3094114 D COG0689 RNase PH; ribonuclease PH 3093398..3094114 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472721.1 CDS pyrE NC_020307.1 3094193 3094834 D COG0461 Orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 3094193..3094834 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472722.1 CDS slmA NC_020307.1 3094912 3095508 R COG1309 Transcriptional regulator; division inhibitor protein complement(3094912..3095508) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472723.1 CDS dut NC_020307.1 3095616 3096071 R COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(3095616..3096071) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472724.1 CDS CFSAN001992_15000 NC_020307.1 3096052 3097272 R COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase complement(3096052..3097272) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472725.1 CDS CFSAN001992_15005 NC_020307.1 3097448 3098062 D COG2003 DNA repair proteins; hypothetical protein 3097448..3098062 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472726.1 CDS rpmB NC_020307.1 3098330 3098566 D COG0227 Ribosomal protein L28; 50S ribosomal protein L28 3098330..3098566 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472727.1 CDS CFSAN001992_15015 NC_020307.1 3098587 3098754 D COG0267 Ribosomal protein L33; 50S ribosomal protein L33 3098587..3098754 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472728.1 CDS CFSAN001992_15020 NC_020307.1 3098852 3099661 D COG0266 Formamidopyrimidine-DNA glycosylase; formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase 3098852..3099661 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472729.1 CDS coaD NC_020307.1 3099689 3100168 R COG0669 Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase complement(3099689..3100168) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472730.1 CDS CFSAN001992_15030 NC_020307.1 3100177 3101454 R COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(3100177..3101454) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472731.1 CDS CFSAN001992_15035 NC_020307.1 3101899 3102933 D COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide core heptosyltransferase RfaQ 3101899..3102933 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472732.1 CDS CFSAN001992_15040 NC_020307.1 3102930 3104054 D COG0438 Glycosyltransferase; glucosyltransferase I RfaG 3102930..3104054 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472733.1 CDS CFSAN001992_15045 NC_020307.1 3104047 3104844 D lipopolysaccharide core heptose(I) kinase RfaP 3104047..3104844 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472734.1 CDS CFSAN001992_15050 NC_020307.1 3104881 3105822 D CMP-N-acetylneuraminate-beta-galactosamide- alpha-2, 3-sialyltransferase 3104881..3105822 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472735.1 CDS CFSAN001992_15055 NC_020307.1 3105908 3106987 D COG0438 Glycosyltransferase; UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase 3105908..3106987 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472736.1 CDS CFSAN001992_15060 NC_020307.1 3106993 3108006 D COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,3-galactosyltransferase 3106993..3108006 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472737.1 CDS CFSAN001992_15065 NC_020307.1 3108024 3109037 D COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,2-glucosyltransferase 3108024..3109037 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472738.1 CDS CFSAN001992_15070 NC_020307.1 3109060 3109758 D COG1527 Archaeal/vacuolar-type H+-ATPase subunit C; lipopolysaccharide core heptose(II) kinase RfaY 3109060..3109758 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472739.1 CDS CFSAN001992_15075 NC_020307.1 3109908 3110717 D lipopolysaccharide core biosynthesis protein 3109908..3110717 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472740.1 CDS CFSAN001992_15080 NC_020307.1 3110817 3111962 D COG0438 Glycosyltransferase; lipopolysaccharide 1,2-N-acetylglucosaminetransferase 3110817..3111962 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472741.1 CDS CFSAN001992_15085 NC_020307.1 3112019 3113233 R COG3307 Lipid A core - O-antigen ligase and related enzymes; O-antigen ligase RfaL complement(3112019..3113233) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472742.1 CDS CFSAN001992_15090 NC_020307.1 3113273 3114226 R COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose:LPS heptosyl transferase I complement(3113273..3114226) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472743.1 CDS CFSAN001992_15095 NC_020307.1 3114226 3115272 R COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose:LPS heptosyltransferase II complement(3114226..3115272) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472744.1 CDS rfaD NC_020307.1 3115275 3116207 R COG0451 Nucleoside-diphosphate-sugar epimerases; ADP-L-glycero-D-mannoheptose-6-epimerase complement(3115275..3116207) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472745.1 CDS CFSAN001992_15105 NC_020307.1 3116410 3117606 D COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 2-amino-3-ketobutyrate coenzyme A ligase 3116410..3117606 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472746.1 CDS tdh NC_020307.1 3117616 3118641 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; L-threonine 3-dehydrogenase 3117616..3118641 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472747.1 CDS CFSAN001992_15115 NC_020307.1 3118934 3119968 D COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyl transferase 3118934..3119968 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472748.1 CDS CFSAN001992_15120 NC_020307.1 3119955 3120917 R COG2861 Uncharacterized protein conserved in bacteria; divergent polysaccharide deacetylase complement(3119955..3120917) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472749.1 CDS CFSAN001992_15125 NC_020307.1 3120921 3122204 R COG4942 Membrane-bound metallopeptidase; AmiB activator complement(3120921..3122204) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472750.1 CDS CFSAN001992_15130 NC_020307.1 3122214 3123758 R COG0696 Phosphoglyceromutase; phosphoglyceromutase complement(3122214..3123758) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472751.1 CDS CFSAN001992_15135 NC_020307.1 3124006 3124437 D COG0607 Rhodanese-related sulfurtransferase; hypothetical protein 3124006..3124437 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472752.1 CDS CFSAN001992_15140 NC_020307.1 3124523 3124774 D COG0695 Glutaredoxin and related proteins; glutaredoxin 3 3124523..3124774 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472753.1 CDS CFSAN001992_15145 NC_020307.1 3124818 3125285 D COG1952 Preprotein translocase subunit SecB; preprotein translocase subunit SecB 3124818..3125285 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472754.1 CDS gpsA NC_020307.1 3125285 3126304 D COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 3125285..3126304 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472755.1 CDS cysE NC_020307.1 3126382 3127203 D COG1045 Serine acetyltransferase; serine acetyltransferase 3126382..3127203 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472756.1 CDS CFSAN001992_15160 NC_020307.1 3127386 3127859 R COG0219 Predicted rRNA methylase (SpoU class); rRNA methylase complement(3127386..3127859) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472757.1 CDS lldD NC_020307.1 3127924 3129114 R COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases; L-lactate dehydrogenase complement(3127924..3129114) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472758.1 CDS CFSAN001992_15170 NC_020307.1 3129111 3129887 R COG2186 Transcriptional regulators; DNA-binding transcriptional repressor LldR complement(3129111..3129887) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472759.1 CDS CFSAN001992_15175 NC_020307.1 3129884 3131539 R COG1620 L-lactate permease; L-lactate permease complement(3129884..3131539) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472760.1 CDS CFSAN001992_15190 NC_020307.1 3136224 3136907 R hypothetical protein complement(3136224..3136907) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472761.1 CDS CFSAN001992_15195 NC_020307.1 3137395 3137757 R COG0323 DNA mismatch repair enzyme (predicted ATPase); hypothetical protein complement(3137395..3137757) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472762.1 CDS CFSAN001992_15200 NC_020307.1 3138048 3138257 D hypothetical protein 3138048..3138257 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472763.1 CDS mtlR NC_020307.1 3138267 3138857 R COG3722 Transcriptional regulator; mannitol repressor protein complement(3138267..3138857) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472764.1 CDS CFSAN001992_15210 NC_020307.1 3138854 3140002 R COG0246 Mannitol-1-phosphate/altronate dehydrogenases; mannitol-1-phosphate 5-dehydrogenase complement(3138854..3140002) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472765.1 CDS CFSAN001992_15215 NC_020307.1 3140131 3142044 R COG2213 Phosphotransferase system, mannitol-specific IIBC component; PTS system mannitol-specific transporter subunit IICBA complement(3140131..3142044) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472766.1 CDS CFSAN001992_15220 NC_020307.1 3142520 3143128 D COG0625 Glutathione S-transferase; glutathione S-transferase 3142520..3143128 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472767.1 CDS CFSAN001992_15225 NC_020307.1 3143227 3144618 D COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; selenocysteine synthase 3143227..3144618 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472768.1 CDS CFSAN001992_15230 NC_020307.1 3144615 3146465 D COG3276 Selenocysteine-specific translation elongation factor; selenocysteinyl-tRNA-specific translation factor 3144615..3146465 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472769.1 CDS CFSAN001992_15235 NC_020307.1 3146651 3147802 D COG1454 Alcohol dehydrogenase, class IV; alcohol dehydrogenase 3146651..3147802 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472770.1 CDS CFSAN001992_15240 NC_020307.1 3147874 3148755 R COG1940 Transcriptional regulator/sugar kinase; transcriptional regulator complement(3147874..3148755) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472771.1 CDS CFSAN001992_15245 NC_020307.1 3148924 3150462 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase B 3148924..3150462 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472772.1 CDS CFSAN001992_15250 NC_020307.1 3150748 3152703 R COG3533 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3150748..3152703) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472773.1 CDS CFSAN001992_15255 NC_020307.1 3152967 3153782 D COG2207 AraC-type DNA-binding domain-containing proteins; Helix-turn-helix regulatory protein (Arac-like) 3152967..3153782 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472774.1 CDS sgbE NC_020307.1 3153943 3154638 R COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-ribulose-5-phosphate 4-epimerase complement(3153943..3154638) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472775.1 CDS CFSAN001992_15265 NC_020307.1 3154632 3155492 R COG3623 Putative L-xylulose-5-phosphate 3-epimerase; L-xylulose 5-phosphate 3-epimerase complement(3154632..3155492) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472776.1 CDS sgbH NC_020307.1 3155497 3156147 R COG0269 3-hexulose-6-phosphate synthase and related proteins; 3-keto-L-gulonate-6-phosphate decarboxylase complement(3155497..3156147) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472777.1 CDS CFSAN001992_15275 NC_020307.1 3156144 3157640 R COG1070 Sugar (pentulose and hexulose) kinases; L-xylulose/3-keto-L-gulonate kinase complement(3156144..3157640) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472778.1 CDS CFSAN001992_15280 NC_020307.1 3157644 3158630 R COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component; TRAP family 2,3-diketo-L-gulonate transporter periplasmic 2,3-diketo-L-gulonate-binding protein complement(3157644..3158630) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472779.1 CDS CFSAN001992_15285 NC_020307.1 3158642 3159919 R COG1593 TRAP-type C4-dicarboxylate transport system, large permease component; L-dehydroascorbate transporter large permease subunit complement(3158642..3159919) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472780.1 CDS CFSAN001992_15290 NC_020307.1 3159922 3160395 R COG3090 TRAP-type C4-dicarboxylate transport system, small permease component; 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM complement(3159922..3160395) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472781.1 CDS CFSAN001992_15295 NC_020307.1 3160534 3161466 R hypothetical protein complement(3160534..3161466) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472782.1 CDS CFSAN001992_15300 NC_020307.1 3161490 3161954 R COG2731 Beta-galactosidase, beta subunit; Protein yiaL complement(3161490..3161954) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472783.1 CDS CFSAN001992_15305 NC_020307.1 3161966 3162964 R COG2055 Malate/L-lactate dehydrogenases; 2,3-diketo-L-gulonate reductase complement(3161966..3162964) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472784.1 CDS CFSAN001992_15310 NC_020307.1 3163194 3163994 D COG1414 Transcriptional regulator; transcriptional regulator 3163194..3163994 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472785.1 CDS CFSAN001992_15315 NC_020307.1 3164111 3164584 D COG1142 Fe-S-cluster-containing hydrogenase components 2; Electron transport protein hydN 3164111..3164584 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472786.1 CDS avtA NC_020307.1 3164621 3165871 R COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase; valine--pyruvate transaminase complement(3164621..3165871) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472787.1 CDS malS NC_020307.1 3166045 3168072 R COG0366 Glycosidases; alpha-amylase complement(3166045..3168072) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472788.1 CDS CFSAN001992_15330 NC_020307.1 3168388 3169212 D COG2992 Uncharacterized FlgJ-related protein; hypothetical protein 3168388..3169212 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472789.1 CDS CFSAN001992_15335 NC_020307.1 3169273 3170451 R COG1609 Transcriptional regulators; xylose operon transcriptional activator complement(3169273..3170451) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472790.1 CDS CFSAN001992_15340 NC_020307.1 3170814 3172136 D COG2115 Xylose isomerase; xylose isomerase 3170814..3172136 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472791.1 CDS CFSAN001992_15345 NC_020307.1 3172236 3173690 D COG1070 Sugar (pentulose and hexulose) kinases; xylulokinase 3172236..3173690 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472792.1 CDS CFSAN001992_15350 NC_020307.1 3173865 3174218 D hypothetical protein 3173865..3174218 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472793.1 CDS CFSAN001992_15355 NC_020307.1 3174241 3175236 R COG3274 Uncharacterized protein conserved in bacteria; O-acetyltransferase complement(3174241..3175236) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472794.1 CDS CFSAN001992_15360 NC_020307.1 3175402 3175704 D putative lipoprotein ysaB Flags: Precursor 3175402..3175704 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472795.1 CDS glyQ NC_020307.1 3175843 3176754 D COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA ligase subunit alpha 3175843..3176754 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472796.1 CDS glyS NC_020307.1 3176764 3178833 D COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA ligase subunit beta 3176764..3178833 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472797.1 CDS CFSAN001992_15375 NC_020307.1 3179954 3180322 R hypothetical protein complement(3179954..3180322) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472798.1 CDS CFSAN001992_15380 NC_020307.1 3180532 3180780 D hypothetical protein 3180532..3180780 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472799.1 CDS CFSAN001992_15385 NC_020307.1 3181036 3181779 D COG3440 Predicted restriction endonuclease; putative restriction endonuclease 3181036..3181779 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472800.1 CDS CFSAN001992_15390 NC_020307.1 3181850 3182236 R hypothetical protein complement(3181850..3182236) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472801.1 CDS CFSAN001992_15395 NC_020307.1 3183130 3183396 D COG4453 Uncharacterized protein conserved in bacteria; putative cytoplasmic protein 3183130..3183396 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472802.1 CDS CFSAN001992_15400 NC_020307.1 3183384 3183869 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative acetyltransferase 3183384..3183869 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472803.1 CDS CFSAN001992_15405 NC_020307.1 3184240 3184779 R hypothetical protein complement(3184240..3184779) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472804.1 CDS CFSAN001992_15410 NC_020307.1 3184952 3185164 R COG1278 Cold shock proteins; RNA chaperone/anti-terminator complement(3184952..3185164) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472805.1 CDS CFSAN001992_15415 NC_020307.1 3185452 3185742 R COG2944 Predicted transcriptional regulator; transcriptional regulator complement(3185452..3185742) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472806.1 CDS CFSAN001992_15420 NC_020307.1 3186181 3186891 D hypothetical protein 3186181..3186891 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472807.1 CDS CFSAN001992_15425 NC_020307.1 3186941 3187915 R COG1052 Lactate dehydrogenase and related dehydrogenases; bifunctional glyoxylate/hydroxypyruvate reductase B complement(3186941..3187915) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472808.1 CDS CFSAN001992_15430 NC_020307.1 3188145 3188807 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; outer membrane lipoprotein complement(3188145..3188807) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472809.1 CDS bisC NC_020307.1 3188960 3191293 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; biotin sulfoxide reductase 3188960..3191293 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472810.1 CDS CFSAN001992_15440 NC_020307.1 3191262 3191702 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase complement(3191262..3191702) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472811.1 CDS CFSAN001992_15445 NC_020307.1 3191680 3192261 R COG2818 3-methyladenine DNA glycosylase; 3-methyl-adenine DNA glycosylase I complement(3191680..3192261) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472812.1 CDS CFSAN001992_15450 NC_020307.1 3192418 3193122 D lipase 3192418..3193122 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472813.1 CDS CFSAN001992_15455 NC_020307.1 3193353 3195044 D COG2194 Predicted membrane-associated, metal-dependent hydrolase; phosphoethanolamine transferase 3193353..3195044 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472814.1 CDS CFSAN001992_15460 NC_020307.1 3195370 3196377 R COG1609 Transcriptional regulators; regulatory protein LacI:Periplasmic binding protein/LacI transcriptional regulator complement(3195370..3196377) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472815.1 CDS CFSAN001992_15465 NC_020307.1 3196527 3197651 D PQQ enzyme repeat protein 3196527..3197651 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472816.1 CDS CFSAN001992_15470 NC_020307.1 3197708 3199033 D COG2233 Xanthine/uracil permeases; xanthine permease 3197708..3199033 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472817.1 CDS CFSAN001992_15475 NC_020307.1 3199589 3201196 D COG0747 ABC-type dipeptide transport system, periplasmic component; dipeptide ABC transporter periplasmic substrate-binding protein DppA 3199589..3201196 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472818.1 CDS CFSAN001992_15480 NC_020307.1 3201353 3202372 D COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide transporter permease DppB 3201353..3202372 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472819.1 CDS CFSAN001992_15485 NC_020307.1 3202382 3203284 D COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide transporter 3202382..3203284 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472820.1 CDS dppD NC_020307.1 3203295 3204278 D COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; overlaps another CDS with the same product name; dipeptide transporter ATP-binding subunit 3203295..3204278 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472821.1 CDS dppF NC_020307.1 3204275 3205288 D COG4608 ABC-type oligopeptide transport system, ATPase component; overlaps another CDS with the same product name; dipeptide transporter ATP-binding subunit 3204275..3205288 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472822.1 CDS CFSAN001992_15500 NC_020307.1 3205389 3206687 R COG0814 Amino acid permeases; inner membrane transport protein YhaO complement(3205389..3206687) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472823.1 CDS CFSAN001992_15505 NC_020307.1 3206805 3206945 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; Cystathionine gamma-lyase Gamma-cystathionase complement(3206805..3206945) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472824.1 CDS CFSAN001992_15510 NC_020307.1 3207330 3207437 D Small toxic polypeptide ldrD (Modular protein) 3207330..3207437 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472825.1 CDS CFSAN001992_15515 NC_020307.1 3207519 3209198 R cellulose synthase operon protein YhjU complement(3207519..3209198) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472826.1 CDS CFSAN001992_15520 NC_020307.1 3209195 3209386 R hypothetical protein complement(3209195..3209386) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472827.1 CDS CFSAN001992_15525 NC_020307.1 3209383 3210954 R cellulose biosynthesis protein BcsE complement(3209383..3210954) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472828.1 CDS CFSAN001992_15530 NC_020307.1 3211199 3211402 D hypothetical protein 3211199..3211402 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472829.1 CDS CFSAN001992_15535 NC_020307.1 3211403 3212155 D COG1192 ATPases involved in chromosome partitioning; cell division protein 3211403..3212155 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472830.1 CDS bcsA NC_020307.1 3212152 3214776 D COG1215 Glycosyltransferases, probably involved in cell wall biogenesis; cellulose synthase catalytic subunit 3212152..3214776 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472831.1 CDS CFSAN001992_15545 NC_020307.1 3214787 3217087 D cellulose synthase regulator protein 3214787..3217087 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472832.1 CDS CFSAN001992_15550 NC_020307.1 3217094 3218200 D COG3405 Endoglucanase Y; endo-1,4-D-glucanase 3217094..3218200 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472833.1 CDS CFSAN001992_15555 NC_020307.1 3218182 3221724 D COG0457 FOG: TPR repeat; cellulose synthase subunit BcsC 3218182..3221724 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472834.1 CDS CFSAN001992_15560 NC_020307.1 3221898 3223904 D COG2199 FOG: GGDEF domain; diguanylate cyclase 3221898..3223904 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472835.1 CDS CFSAN001992_15565 NC_020307.1 3224062 3225348 D COG1301 Na+/H+-dicarboxylate symporters; C4-dicarboxylate transporter DctA 3224062..3225348 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472836.1 CDS CFSAN001992_15570 NC_020307.1 3225568 3227055 D COG0612 Predicted Zn-dependent peptidases; putative zinc protease pqqL 3225568..3227055 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472837.1 CDS CFSAN001992_15575 NC_020307.1 3227109 3228038 R COG0524 Sugar kinases, ribokinase family; ketodeoxygluconokinase KdgK complement(3227109..3228038) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472838.1 CDS CFSAN001992_15580 NC_020307.1 3228267 3229034 D COG2200 FOG: EAL domain; cyclic-di-GMP phosphodiesterase 3228267..3229034 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472839.1 CDS CFSAN001992_15585 NC_020307.1 3229144 3231204 D COG2982 Uncharacterized protein involved in outer membrane biogenesis; hypothetical protein 3229144..3231204 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472840.1 CDS CFSAN001992_15590 NC_020307.1 3231244 3232566 R COG0477 Permeases of the major facilitator superfamily; Sugar (and other) transporter complement(3231244..3232566) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472841.1 CDS CFSAN001992_15605 NC_020307.1 3234017 3234916 R COG0583 Transcriptional regulator; putative RuBisCO transcriptional regulator complement(3234017..3234916) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472842.1 CDS CFSAN001992_15610 NC_020307.1 3235549 3236151 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; putative HTH-type transcriptional regulator yhjB 3235549..3236151 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472843.1 CDS CFSAN001992_15615 NC_020307.1 3236157 3236513 R COG3772 Phage-related lysozyme (muraminidase); phage endolysin complement(3236157..3236513) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472844.1 CDS CFSAN001992_15620 NC_020307.1 3236794 3238383 D hypothetical protein 3236794..3238383 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472845.1 CDS treF NC_020307.1 3238396 3240045 R COG1626 Neutral trehalase; trehalase complement(3238396..3240045) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472846.1 CDS CFSAN001992_15630 NC_020307.1 3240371 3241090 D COG2188 Transcriptional regulators; GntR family transcriptional regulator 3240371..3241090 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472847.1 CDS CFSAN001992_15635 NC_020307.1 3241269 3242243 D COG2222 Predicted phosphosugar isomerases; phosphosugar-binding protein 3241269..3242243 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472848.1 CDS CFSAN001992_15640 NC_020307.1 3242307 3243152 D COG0524 Sugar kinases, ribokinase family; PfkB domain-containing protein 3242307..3243152 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472849.1 CDS CFSAN001992_15645 NC_020307.1 3243206 3244525 D COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter 3243206..3244525 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472850.1 CDS CFSAN001992_15650 NC_020307.1 3244584 3245627 D COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; L-asparaginase 3244584..3245627 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472851.1 CDS CFSAN001992_15655 NC_020307.1 3245674 3247026 R COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; glutathione reductase complement(3245674..3247026) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472852.1 CDS CFSAN001992_15660 NC_020307.1 3247131 3247973 R COG2961 Protein involved in catabolism of external DNA; DNA utilization protein YhiR complement(3247131..3247973) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472853.1 CDS CFSAN001992_15665 NC_020307.1 3248184 3249455 D COG0671 Membrane-associated phospholipid phosphatase; phosphatase 3248184..3249455 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472854.1 CDS CFSAN001992_15670 NC_020307.1 3249637 3251679 D COG0339 Zn-dependent oligopeptidases; oligopeptidase A 3249637..3251679 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472855.1 CDS CFSAN001992_15675 NC_020307.1 3251686 3252444 D COG0500 SAM-dependent methyltransferases; methyltransferase 3251686..3252444 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472856.1 CDS CFSAN001992_15680 NC_020307.1 3252536 3254008 R COG3104 Dipeptide/tripeptide permease; dipeptide/tripeptide permease B complement(3252536..3254008) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472857.1 CDS CFSAN001992_15685 NC_020307.1 3254333 3254767 R COG0589 Universal stress protein UspA and related nucleotide-binding proteins; universal stress global response regulator UspA complement(3254333..3254767) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472858.1 CDS CFSAN001992_15690 NC_020307.1 3255155 3255490 D universal stress protein UspB 3255155..3255490 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472859.1 CDS CFSAN001992_15695 NC_020307.1 3255631 3257127 R COG0306 Phosphate/sulphate permeases; phosphate transporter PitA complement(3255631..3257127) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472860.1 CDS CFSAN001992_15700 NC_020307.1 3257358 3258554 D COG2081 Predicted flavoproteins; hypothetical protein 3257358..3258554 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472861.1 CDS CFSAN001992_15705 NC_020307.1 3258860 3259927 D COG0845 Membrane-fusion protein; HlyD family secretion protein 3258860..3259927 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472862.1 CDS CFSAN001992_15710 NC_020307.1 3259924 3262665 D COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter permease and ATP-binding protein 3259924..3262665 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472863.1 CDS CFSAN001992_15715 NC_020307.1 3262665 3263789 D COG0842 ABC-type multidrug transport system, permease component; ABC-2 type superfamily transport protein 3262665..3263789 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472864.1 CDS CFSAN001992_15720 NC_020307.1 3263892 3264293 R COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; nickel responsive regulator complement(3263892..3264293) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472865.1 CDS CFSAN001992_15725 NC_020307.1 3264385 3264963 R COG2091 Phosphopantetheinyl transferase; holo-ACP synthase complement(3264385..3264963) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472866.1 CDS CFSAN001992_15730 NC_020307.1 3265015 3266064 R COG0628 Predicted permease; Putative PerM family permease complement(3265015..3266064) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472867.1 CDS CFSAN001992_15735 NC_020307.1 3266196 3267413 D COG0477 Permeases of the major facilitator superfamily; major facilitator superfamily transporter 3266196..3267413 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472868.1 CDS CFSAN001992_15740 NC_020307.1 3267417 3267974 R hypothetical protein complement(3267417..3267974) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472869.1 CDS CFSAN001992_15745 NC_020307.1 3268047 3268712 R COG1738 Uncharacterized conserved protein; hypothetical protein complement(3268047..3268712) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472870.1 CDS CFSAN001992_15750 NC_020307.1 3268882 3269127 D COG0425 Predicted redox protein, regulator of disulfide bond formation; sulfurtransferase tusA 3268882..3269127 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472871.1 CDS CFSAN001992_15755 NC_020307.1 3269151 3270794 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis citrate transducer complement(3269151..3270794) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472872.1 CDS zntA NC_020307.1 3270994 3273192 R COG2217 Cation transport ATPase; zinc/cadmium/mercury/lead-transporting ATPase complement(3270994..3273192) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472873.1 CDS CFSAN001992_15765 NC_020307.1 3273273 3273899 R COG3714 Predicted membrane protein; putative membrane protein yhhN complement(3273273..3273899) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472874.1 CDS CFSAN001992_15770 NC_020307.1 3274041 3274412 D COG0550 Topoisomerase IA; hypothetical protein 3274041..3274412 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472875.1 CDS CFSAN001992_15775 NC_020307.1 3274434 3274703 R COG3776 Predicted membrane protein; hypothetical protein complement(3274434..3274703) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472876.1 CDS rsmD NC_020307.1 3274693 3275289 R COG0742 N6-adenine-specific methylase; 16S rRNA m(2)G966-methyltransferase complement(3274693..3275289) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472877.1 CDS CFSAN001992_15785 NC_020307.1 3275415 3276890 D COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY 3275415..3276890 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472878.1 CDS CFSAN001992_15790 NC_020307.1 3276893 3277561 D COG2884 Predicted ATPase involved in cell division; cell division protein FtsE 3276893..3277561 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472879.1 CDS ftsX NC_020307.1 3277554 3278609 D COG2177 Cell division protein; cell division ABC transporter subunit FtsX 3277554..3278609 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472880.1 CDS CFSAN001992_15800 NC_020307.1 3278855 3279709 D COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase factor sigma-32 3278855..3279709 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472881.1 CDS CFSAN001992_15805 NC_020307.1 3280031 3281134 D COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; leucine ABC transporter subunit substrate-binding protein LivK 3280031..3281134 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472882.1 CDS CFSAN001992_15810 NC_020307.1 3281330 3281713 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein complement(3281330..3281713) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472883.1 CDS CFSAN001992_15815 NC_020307.1 3282136 3283245 D COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; leucine ABC transporter subunit substrate-binding protein LivK 3282136..3283245 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472884.1 CDS CFSAN001992_15820 NC_020307.1 3283305 3284231 D COG0559 Branched-chain amino acid ABC-type transport system, permease components; branched-chain amino acid transporter permease subunit LivH 3283305..3284231 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472885.1 CDS livM NC_020307.1 3284228 3285505 D COG4177 ABC-type branched-chain amino acid transport system, permease component; leucine/isoleucine/valine transporter permease subunit 3284228..3285505 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472886.1 CDS livG NC_020307.1 3285502 3286269 D COG0411 ABC-type branched-chain amino acid transport systems, ATPase component; leucine/isoleucine/valine transporter ATP-binding subunit 3285502..3286269 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472887.1 CDS livF NC_020307.1 3286283 3286984 D COG0410 ABC-type branched-chain amino acid transport systems, ATPase component; leucine/isoleucine/valine transporter ATP-binding subunit 3286283..3286984 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472888.1 CDS CFSAN001992_15840 NC_020307.1 3287148 3287426 D hypothetical protein 3287148..3287426 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472889.1 CDS CFSAN001992_15845 NC_020307.1 3287659 3288975 D COG1653 ABC-type sugar transport system, periplasmic component; glycerol-3-phosphate transporter periplasmic binding protein 3287659..3288975 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472890.1 CDS CFSAN001992_15850 NC_020307.1 3289080 3289967 D COG1175 ABC-type sugar transport systems, permease components; glycerol-3-phosphate transporter permease 3289080..3289967 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472891.1 CDS CFSAN001992_15855 NC_020307.1 3289964 3290809 D COG0395 ABC-type sugar transport system, permease component; glycerol-3-phosphate transporter membrane protein 3289964..3290809 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472892.1 CDS ugpC NC_020307.1 3290811 3291881 D COG3839 ABC-type sugar transport systems, ATPase components; glycerol-3-phosphate transporter ATP-binding subunit 3290811..3291881 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472893.1 CDS ugpQ NC_020307.1 3291878 3292618 D COG0584 Glycerophosphoryl diester phosphodiesterase; cytoplasmic glycerophosphodiester phosphodiesterase 3291878..3292618 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472894.1 CDS CFSAN001992_15870 NC_020307.1 3292631 3293047 R hypothetical protein complement(3292631..3293047) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472895.1 CDS ggt NC_020307.1 3293173 3294915 D COG0405 Gamma-glutamyltransferase; gamma-glutamyltranspeptidase 3293173..3294915 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472896.1 CDS CFSAN001992_15880 NC_020307.1 3294960 3295994 R COG1735 Predicted metal-dependent hydrolase with the TIM-barrel fold; phosphotriesterase complement(3294960..3295994) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472897.1 CDS CFSAN001992_15885 NC_020307.1 3295991 3296962 R COG3238 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3295991..3296962) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472898.1 CDS CFSAN001992_15890 NC_020307.1 3297016 3297777 R COG5426 Uncharacterized membrane protein; hypothetical protein complement(3297016..3297777) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472899.1 CDS CFSAN001992_15895 NC_020307.1 3297793 3299007 R COG1349 Transcriptional regulators of sugar metabolism; ribokinase complement(3297793..3299007) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472900.1 CDS CFSAN001992_15900 NC_020307.1 3299075 3299191 D hypothetical protein 3299075..3299191 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472901.1 CDS CFSAN001992_15905 NC_020307.1 3299272 3299760 R COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; acetyltransferase YhhY complement(3299272..3299760) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472902.1 CDS CFSAN001992_15910 NC_020307.1 3300227 3301264 D COG0673 Predicted dehydrogenases and related proteins; oxidoreductase 3300227..3301264 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472903.1 CDS CFSAN001992_15915 NC_020307.1 3301388 3302083 D COG1741 Pirin-related protein; pirin 3301388..3302083 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472904.1 CDS CFSAN001992_15920 NC_020307.1 3302454 3303449 D COG1609 Transcriptional regulators; gluconate operon transcriptional regulator 3302454..3303449 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472905.1 CDS gntK NC_020307.1 3303588 3304121 D COG3265 Gluconate kinase; gluconate kinase 1 3303588..3304121 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472906.1 CDS CFSAN001992_15930 NC_020307.1 3304118 3305458 D COG2610 H+/gluconate symporter and related permeases; low affinity gluconate transporter 3304118..3305458 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472907.1 CDS CFSAN001992_15935 NC_020307.1 3305882 3306988 D COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 3305882..3306988 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472908.1 CDS CFSAN001992_15940 NC_020307.1 3307335 3309521 D COG0296 1,4-alpha-glucan branching enzyme; glycogen branching enzyme 3307335..3309521 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472909.1 CDS CFSAN001992_15945 NC_020307.1 3309518 3311494 D COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases; glycogen debranching enzyme 3309518..3311494 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472910.1 CDS glgC NC_020307.1 3311509 3312804 D COG0448 ADP-glucose pyrophosphorylase; glucose-1-phosphate adenylyltransferase 3311509..3312804 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472911.1 CDS glgA NC_020307.1 3312804 3314237 D COG0297 Glycogen synthase; glycogen synthase 3312804..3314237 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472912.1 CDS CFSAN001992_15960 NC_020307.1 3314257 3316704 D COG0058 Glucan phosphorylase; glycogen phosphorylase 3314257..3316704 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472913.1 CDS CFSAN001992_15965 NC_020307.1 3316804 3317346 D hypothetical protein 3316804..3317346 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472914.1 CDS CFSAN001992_15970 NC_020307.1 3317511 3317885 D COG0226 ABC-type phosphate transport system, periplasmic component; periplasmic phosphate-binding protein 3317511..3317885 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472915.1 CDS CFSAN001992_15975 NC_020307.1 3317895 3318602 D hypothetical protein 3317895..3318602 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472916.1 CDS CFSAN001992_15980 NC_020307.1 3318632 3319015 D hypothetical protein 3318632..3319015 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472917.1 CDS glpD NC_020307.1 3319062 3320570 R COG0578 Glycerol-3-phosphate dehydrogenase; glycerol-3-phosphate dehydrogenase complement(3319062..3320570) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472918.1 CDS glpE NC_020307.1 3320769 3321095 D COG0607 Rhodanese-related sulfurtransferase; thiosulfate sulfurtransferase 3320769..3321095 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472919.1 CDS CFSAN001992_15995 NC_020307.1 3321171 3322001 D COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid); intramembrane serine protease GlpG 3321171..3322001 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472920.1 CDS CFSAN001992_16000 NC_020307.1 3322095 3322853 D COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional repressor GlpR 3322095..3322853 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472921.1 CDS CFSAN001992_16005 NC_020307.1 3322921 3325626 R COG2909 ATP-dependent transcriptional regulator; transcriptional regulator MalT complement(3322921..3325626) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472922.1 CDS CFSAN001992_16010 NC_020307.1 3326220 3328613 D COG0058 Glucan phosphorylase; maltodextrin phosphorylase 3326220..3328613 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472923.1 CDS malQ NC_020307.1 3328623 3330701 D COG1640 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 3328623..3330701 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472924.1 CDS CFSAN001992_16020 NC_020307.1 3330820 3332136 R COG2610 H+/gluconate symporter and related permeases; high-affinity gluconate transporter complement(3330820..3332136) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472925.1 CDS CFSAN001992_16025 NC_020307.1 3332513 3333088 R COG0316 Uncharacterized conserved protein; Fe/S biogenesis protein NfuA complement(3332513..3333088) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472926.1 CDS CFSAN001992_16030 NC_020307.1 3333147 3333830 R COG1040 Predicted amidophosphoribosyltransferases; DNA utilization protein GntX complement(3333147..3333830) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472927.1 CDS CFSAN001992_16035 NC_020307.1 3333868 3334638 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); carboxylesterase BioH 3333868..3334638 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472928.1 CDS CFSAN001992_16040 NC_020307.1 3334674 3335600 R hypothetical protein complement(3334674..3335600) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472929.1 CDS CFSAN001992_16045 NC_020307.1 3335835 3336071 R ferrous iron transport protein FeoC complement(3335835..3336071) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472930.1 CDS feoB NC_020307.1 3336084 3338402 R COG0370 Fe2+ transport system protein B; ferrous iron transport protein B complement(3336084..3338402) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472931.1 CDS feoA NC_020307.1 3338421 3338648 R COG1918 Fe2+ transport system protein A; ferrous iron transport protein A complement(3338421..3338648) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472932.1 CDS CFSAN001992_16060 NC_020307.1 3339085 3341415 R COG2183 Transcriptional accessory protein; transcriptional accessory protein complement(3339085..3341415) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472933.1 CDS greB NC_020307.1 3341514 3341987 R COG0782 Transcription elongation factor; transcription elongation factor GreB complement(3341514..3341987) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472934.1 CDS ompR NC_020307.1 3342213 3342932 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; osmolarity response regulator 3342213..3342932 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472935.1 CDS envZ NC_020307.1 3342929 3344281 D COG0642 Signal transduction histidine kinase; osmolarity sensor protein 3342929..3344281 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472936.1 CDS CFSAN001992_16080 NC_020307.1 3344356 3345975 R COG1866 Phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase complement(3344356..3345975) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472937.1 CDS CFSAN001992_16085 NC_020307.1 3346355 3348064 D hypothetical protein 3346355..3348064 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472938.1 CDS hslO NC_020307.1 3348173 3349051 R COG1281 Disulfide bond chaperones of the HSP33 family; Hsp33-like chaperonin complement(3348173..3349051) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472939.1 CDS CFSAN001992_16095 NC_020307.1 3349076 3349477 R COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); ribosome-associated heat shock protein Hsp15 complement(3349076..3349477) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472940.1 CDS CFSAN001992_16100 NC_020307.1 3349488 3350156 R COG1011 Predicted hydrolase (HAD superfamily); GMP/IMP nucleotidase complement(3349488..3350156) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472941.1 CDS CFSAN001992_16105 NC_020307.1 3350221 3352353 R COG3538 Uncharacterized conserved protein; Intracellular growth attenuator protein igaA complement(3350221..3352353) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472942.1 CDS nudE NC_020307.1 3352675 3353238 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; adenosine nucleotide hydrolase NudE 3352675..3353238 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472943.1 CDS mrcA NC_020307.1 3353334 3355886 R COG5009 Membrane carboxypeptidase/penicillin-binding protein; penicillin-binding protein 1a complement(3353334..3355886) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472944.1 CDS CFSAN001992_16120 NC_020307.1 3356007 3356786 D putative pilus assembly protein 3356007..3356786 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472945.1 CDS CFSAN001992_16125 NC_020307.1 3356786 3357325 D COG3166 Tfp pilus assembly protein PilN; PilN family protein 3356786..3357325 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472946.1 CDS CFSAN001992_16130 NC_020307.1 3357309 3357782 D hypothetical protein 3357309..3357782 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472947.1 CDS CFSAN001992_16135 NC_020307.1 3357772 3358173 D hypothetical protein 3357772..3358173 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472948.1 CDS hofQ NC_020307.1 3358088 3359326 D COG4796 Type II secretory pathway, component HofQ; outer membrane porin HofQ 3358088..3359326 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472949.1 CDS aroK NC_020307.1 3359791 3360312 D COG0703 Shikimate kinase; shikimate kinase I 3359791..3360312 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472950.1 CDS aroB NC_020307.1 3360369 3361457 D COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase 3360369..3361457 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472951.1 CDS CFSAN001992_16155 NC_020307.1 3361555 3362832 D COG3266 Uncharacterized protein conserved in bacteria; cell division protein DamX 3361555..3362832 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472952.1 CDS CFSAN001992_16160 NC_020307.1 3363013 3363849 D COG0338 Site-specific DNA methylase; DNA adenine methylase 3363013..3363849 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472953.1 CDS CFSAN001992_16165 NC_020307.1 3363867 3364544 D COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 3363867..3364544 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472954.1 CDS CFSAN001992_16170 NC_020307.1 3364537 3365295 D COG0546 Predicted phosphatases; phosphoglycolate phosphatase 3364537..3365295 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472955.1 CDS CFSAN001992_16175 NC_020307.1 3365288 3366292 D COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA ligase 3365288..3366292 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472956.1 CDS CFSAN001992_16180 NC_020307.1 3366437 3366607 R outer membrane lipoprotein complement(3366437..3366607) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472957.1 CDS CFSAN001992_16185 NC_020307.1 3366801 3372626 R BigA complement(3366801..3372626) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472958.1 CDS cysG NC_020307.1 3372964 3374337 R COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); siroheme synthase complement(3372964..3374337) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472959.1 CDS CFSAN001992_16195 NC_020307.1 3374349 3375158 R COG2116 Formate/nitrite family of transporters; nitrite transporter NirC complement(3374349..3375158) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472960.1 CDS nirD NC_020307.1 3375353 3375679 R COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; nitrite reductase small subunit complement(3375353..3375679) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472961.1 CDS CFSAN001992_16205 NC_020307.1 3375676 3378219 R COG1251 NAD(P)H-nitrite reductase; nitrite reductase subunit NirD complement(3375676..3378219) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472962.1 CDS CFSAN001992_16210 NC_020307.1 3378538 3379719 R COG0477 Permeases of the major facilitator superfamily; transporter complement(3378538..3379719) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472963.1 CDS CFSAN001992_16215 NC_020307.1 3379996 3380568 D COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase A (rotamase A) 3379996..3380568 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472964.1 CDS CFSAN001992_16220 NC_020307.1 3380682 3380849 D hypothetical protein 3380682..3380849 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472965.1 CDS CFSAN001992_16225 NC_020307.1 3380839 3381441 D COG2184 Protein involved in cell division; cell filamentation protein Fic 3380839..3381441 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472966.1 CDS CFSAN001992_16230 NC_020307.1 3381476 3382039 D COG0512 Anthranilate/para-aminobenzoate synthases component II; para-aminobenzoate synthase component II 3381476..3382039 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472967.1 CDS argD NC_020307.1 3382125 3383342 D COG4992 Ornithine/acetylornithine aminotransferase; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 3382125..3383342 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472968.1 CDS CFSAN001992_16240 NC_020307.1 3383385 3385472 R COG1289 Predicted membrane protein; putative inner membrane protein complement(3383385..3385472) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472969.1 CDS CFSAN001992_16245 NC_020307.1 3385521 3386153 R COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; DNA-binding transcriptional dual regulator Crp complement(3385521..3386153) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472970.1 CDS CFSAN001992_16250 NC_020307.1 3386461 3386865 D COG1765 Predicted redox protein, regulator of disulfide bond formation; hypothetical protein 3386461..3386865 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472971.1 CDS CFSAN001992_16255 NC_020307.1 3386961 3387830 R COG3954 Phosphoribulokinase; phosphoribulokinase complement(3386961..3387830) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472972.1 CDS CFSAN001992_16260 NC_020307.1 3387882 3388100 R COG3089 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3387882..3388100) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472973.1 CDS CFSAN001992_16265 NC_020307.1 3388097 3389119 R COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold; hydrolase complement(3388097..3389119) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472974.1 CDS CFSAN001992_16270 NC_020307.1 3389362 3389673 D monooxygenase 3389362..3389673 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472975.1 CDS CFSAN001992_16275 NC_020307.1 3389675 3389896 R COG0583 Transcriptional regulator; ATPase component of ABC transporter with duplicated ATPase domain complement(3389675..3389896) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472976.1 CDS CFSAN001992_16280 NC_020307.1 3389912 3391819 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein complement(3389912..3391819) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472977.1 CDS CFSAN001992_16285 NC_020307.1 3392085 3392636 D COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); glutathione-regulated potassium-efflux system ancillary protein KefG 3392085..3392636 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472978.1 CDS CFSAN001992_16290 NC_020307.1 3392636 3394441 D COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein KefB 3392636..3394441 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472979.1 CDS CFSAN001992_16295 NC_020307.1 3394452 3394652 D COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain; hypothetical protein 3394452..3394652 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472980.1 CDS CFSAN001992_16300 NC_020307.1 3394747 3395337 D COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase 3394747..3395337 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472981.1 CDS CFSAN001992_16305 NC_020307.1 3395526 3395744 R COG2900 Uncharacterized protein conserved in bacteria; phi X174 lysis protein complement(3395526..3395744) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472982.1 CDS CFSAN001992_16310 NC_020307.1 3395964 3396782 D COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; FKBP-type peptidyl-prolyl cis-trans isomerase 3395964..3396782 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472983.1 CDS CFSAN001992_16315 NC_020307.1 3397059 3397781 D COG2964 Uncharacterized protein conserved in bacteria; hypothetical protein 3397059..3397781 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472984.1 CDS CFSAN001992_16320 NC_020307.1 3397781 3398107 D COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction; sulfur transfer complex subunit TusD 3397781..3398107 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472985.1 CDS CFSAN001992_16325 NC_020307.1 3398166 3398522 D COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur; sulfur relay protein TusC 3398166..3398522 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472986.1 CDS CFSAN001992_16330 NC_020307.1 3398530 3398817 D COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur; sulfur transfer complex subunit TusB 3398530..3398817 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472987.1 CDS CFSAN001992_16335 NC_020307.1 3398943 3399317 D COG0048 Ribosomal protein S12; 30S ribosomal protein S12 3398943..3399317 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472988.1 CDS CFSAN001992_16340 NC_020307.1 3399413 3399883 D COG0049 Ribosomal protein S7; 30S ribosomal protein S7 3399413..3399883 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472989.1 CDS CFSAN001992_16345 NC_020307.1 3399980 3402094 D COG0480 Translation elongation factors (GTPases); elongation factor G 3399980..3402094 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472990.1 CDS CFSAN001992_16350 NC_020307.1 3402166 3403350 D COG0050 GTPases - translation elongation factors; Elongation factor Tu 3402166..3403350 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472991.1 CDS CFSAN001992_16355 NC_020307.1 3403535 3403729 D COG2906 Bacterioferritin-associated ferredoxin; bacterioferritin-associated ferredoxin 3403535..3403729 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472992.1 CDS CFSAN001992_16360 NC_020307.1 3403802 3404278 D COG2193 Bacterioferritin (cytochrome b1); bacterioferritin 3403802..3404278 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472993.1 CDS CFSAN001992_16365 NC_020307.1 3404275 3404742 R COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; type III leader peptidase complement(3404275..3404742) Salmonella enterica subsp. enterica serovar Javiana str. YP_007472994.1 CDS CFSAN001992_16370 NC_020307.1 3405122 3405433 D COG0051 Ribosomal protein S10; 30S ribosomal protein S10 3405122..3405433 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472995.1 CDS rplC NC_020307.1 3405466 3406095 D COG0087 Ribosomal protein L3; 50S ribosomal protein L3 3405466..3406095 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472996.1 CDS CFSAN001992_16380 NC_020307.1 3406106 3406711 D COG0088 Ribosomal protein L4; 50S ribosomal protein L4 3406106..3406711 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472997.1 CDS rplW NC_020307.1 3406708 3407010 D COG0089 Ribosomal protein L23; 50S ribosomal protein L23 3406708..3407010 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472998.1 CDS rplB NC_020307.1 3407028 3407849 D COG0090 Ribosomal protein L2; 50S ribosomal protein L2 3407028..3407849 Salmonella enterica subsp. enterica serovar Javiana str. YP_007472999.1 CDS rpsS NC_020307.1 3407866 3408144 D COG0185 Ribosomal protein S19; 30S ribosomal protein S19 3407866..3408144 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473000.1 CDS CFSAN001992_16400 NC_020307.1 3408159 3408491 D COG0091 Ribosomal protein L22; 50S ribosomal protein L22 3408159..3408491 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473001.1 CDS CFSAN001992_16405 NC_020307.1 3408509 3409210 D COG0092 Ribosomal protein S3; 30S ribosomal protein S3 3408509..3409210 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473002.1 CDS rplP NC_020307.1 3409223 3409633 D COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 3409223..3409633 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473003.1 CDS CFSAN001992_16415 NC_020307.1 3409633 3409824 D COG0255 Ribosomal protein L29; 50S ribosomal protein L29 3409633..3409824 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473004.1 CDS rpsQ NC_020307.1 3409824 3410078 D COG0186 Ribosomal protein S17; 30S ribosomal protein S17 3409824..3410078 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473005.1 CDS rplN NC_020307.1 3410242 3410613 D COG0093 Ribosomal protein L14; 50S ribosomal protein L14 3410242..3410613 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473006.1 CDS CFSAN001992_16430 NC_020307.1 3410624 3410938 D COG0198 Ribosomal protein L24; 50S ribosomal protein L24 3410624..3410938 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473007.1 CDS rplE NC_020307.1 3410953 3411492 D COG0094 Ribosomal protein L5; 50S ribosomal protein L5 3410953..3411492 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473008.1 CDS rpsN NC_020307.1 3411507 3411812 D COG0199 Ribosomal protein S14; 30S ribosomal protein S14 3411507..3411812 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473009.1 CDS CFSAN001992_16445 NC_020307.1 3411846 3412238 D COG0096 Ribosomal protein S8; 30S ribosomal protein S8 3411846..3412238 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473010.1 CDS rplF NC_020307.1 3412251 3412784 D COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 3412251..3412784 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473011.1 CDS rplR NC_020307.1 3412794 3413147 D COG0256 Ribosomal protein L18; 50S ribosomal protein L18 3412794..3413147 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473012.1 CDS rpsE NC_020307.1 3413162 3413665 D COG0098 Ribosomal protein S5; 30S ribosomal protein S5 3413162..3413665 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473013.1 CDS rpmD NC_020307.1 3413669 3413848 D COG1841 Ribosomal protein L30/L7E; 50S ribosomal protein L30 3413669..3413848 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473014.1 CDS CFSAN001992_16470 NC_020307.1 3413852 3414286 D COG0200 Ribosomal protein L15; 50S ribosomal protein L15 3413852..3414286 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473015.1 CDS secY NC_020307.1 3414294 3415625 D COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY 3414294..3415625 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473016.1 CDS CFSAN001992_16480 NC_020307.1 3415657 3415773 D COG0257 Ribosomal protein L36; 50S ribosomal protein L36 3415657..3415773 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473017.1 CDS rpsM NC_020307.1 3415920 3416276 D COG0099 Ribosomal protein S13; 30S ribosomal protein S13 3415920..3416276 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473018.1 CDS CFSAN001992_16490 NC_020307.1 3416293 3416682 D COG0100 Ribosomal protein S11; 30S ribosomal protein S11 3416293..3416682 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473019.1 CDS rpsD NC_020307.1 3416716 3417336 D COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 3416716..3417336 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473020.1 CDS CFSAN001992_16500 NC_020307.1 3417362 3418351 D COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha 3417362..3418351 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473021.1 CDS rplQ NC_020307.1 3418392 3418775 D COG0203 Ribosomal protein L17; 50S ribosomal protein L17 3418392..3418775 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473022.1 CDS CFSAN001992_16510 NC_020307.1 3418883 3419251 D hypothetical protein 3418883..3419251 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473023.1 CDS zntR NC_020307.1 3419262 3419687 D COG0789 Predicted transcriptional regulators; zinc-responsive transcriptional regulator 3419262..3419687 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473024.1 CDS CFSAN001992_16520 NC_020307.1 3419745 3420014 D COG3036 Uncharacterized protein conserved in bacteria; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3419745..3420014 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473025.1 CDS mscL NC_020307.1 3419950 3420363 R COG1970 Large-conductance mechanosensitive channel; large-conductance mechanosensitive channel complement(3419950..3420363) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473026.1 CDS trkA NC_020307.1 3420505 3421881 R COG0569 K+ transport systems, NAD-binding component; potassium transporter peripheral membrane component complement(3420505..3421881) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473027.1 CDS CFSAN001992_16535 NC_020307.1 3421903 3423192 R COG0144 tRNA and rRNA cytosine-C5-methylases; 16S rRNA methyltransferase B complement(3421903..3423192) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473028.1 CDS fmt NC_020307.1 3423244 3424191 R COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(3423244..3424191) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473029.1 CDS def NC_020307.1 3424207 3424716 R COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(3424207..3424716) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473030.1 CDS CFSAN001992_16550 NC_020307.1 3424848 3425972 D COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; hypothetical protein 3424848..3425972 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473031.1 CDS CFSAN001992_16555 NC_020307.1 3425944 3426417 D COG2922 Uncharacterized protein conserved in bacteria; hypothetical protein 3425944..3426417 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473032.1 CDS CFSAN001992_16560 NC_020307.1 3426444 3426986 D COG0551 Zn-finger domain associated with topoisomerase type I; hypothetical protein 3426444..3426986 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473033.1 CDS CFSAN001992_16565 NC_020307.1 3426991 3427563 D COG0009 Putative translation factor (SUA5); tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein 3426991..3427563 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473034.1 CDS aroE NC_020307.1 3427568 3428386 D COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 3427568..3428386 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473035.1 CDS CFSAN001992_16575 NC_020307.1 3428383 3428640 D periplasmic protein 3428383..3428640 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473036.1 CDS CFSAN001992_16580 NC_020307.1 3428616 3429170 R COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; hypothetical protein complement(3428616..3429170) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473037.1 CDS CFSAN001992_16585 NC_020307.1 3429284 3429436 D hypothetical protein 3429284..3429436 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473038.1 CDS CFSAN001992_16590 NC_020307.1 3435829 3436050 R hypothetical protein complement(3435829..3436050) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473039.1 CDS CFSAN001992_16595 NC_020307.1 3436288 3439401 R COG0841 Cation/multidrug efflux pump; multidrug efflux system protein AcrF complement(3436288..3439401) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473040.1 CDS CFSAN001992_16600 NC_020307.1 3439413 3440570 R COG0845 Membrane-fusion protein; acriflavine resistance protein E complement(3439413..3440570) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473041.1 CDS CFSAN001992_16605 NC_020307.1 3440983 3441645 D COG1309 Transcriptional regulator; DNA-binding transcriptional regulator EnvR 3440983..3441645 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473042.1 CDS CFSAN001992_16610 NC_020307.1 3441648 3443747 R COG3300 MHYT domain (predicted integral membrane sensor domain); ggdef domain/eal domain-containing protein complement(3441648..3443747) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473043.1 CDS CFSAN001992_16615 NC_020307.1 3443897 3444061 R hypothetical protein complement(3443897..3444061) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473044.1 CDS CFSAN001992_16620 NC_020307.1 3444144 3445028 R COG0863 DNA modification methylase; methyltransferase complement(3444144..3445028) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473045.1 CDS CFSAN001992_16625 NC_020307.1 3445114 3445410 R COG2901 Factor for inversion stimulation Fis, transcriptional activator; global DNA-binding transcriptional dual regulator Fis complement(3445114..3445410) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473046.1 CDS CFSAN001992_16630 NC_020307.1 3445436 3446401 R COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase B complement(3445436..3446401) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473047.1 CDS prmA NC_020307.1 3447062 3447943 R COG2264 Ribosomal protein L11 methylase; ribosomal protein L11 methyltransferase complement(3447062..3447943) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473048.1 CDS panF NC_020307.1 3447955 3449406 R COG4145 Na+/panthothenate symporter; sodium/panthothenate symporter complement(3447955..3449406) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473049.1 CDS CFSAN001992_16645 NC_020307.1 3449396 3449638 R COG3924 Predicted membrane protein; hypothetical protein complement(3449396..3449638) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473050.1 CDS CFSAN001992_16650 NC_020307.1 3449747 3451096 R COG0439 Biotin carboxylase; acetyl-CoA carboxylase biotin carboxylase subunit complement(3449747..3451096) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473051.1 CDS CFSAN001992_16655 NC_020307.1 3451107 3451577 R COG0511 Biotin carboxyl carrier protein; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit complement(3451107..3451577) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473052.1 CDS CFSAN001992_16660 NC_020307.1 3451970 3452569 R COG2717 Predicted membrane protein; sulfite oxidase subunit YedZ complement(3451970..3452569) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473053.1 CDS CFSAN001992_16665 NC_020307.1 3452570 3453574 R COG2041 Sulfite oxidase and related enzymes; TMAO/DMSO reductase complement(3452570..3453574) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473054.1 CDS CFSAN001992_16670 NC_020307.1 3453687 3454661 R COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases; hypothetical protein complement(3453687..3454661) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473055.1 CDS CFSAN001992_16675 NC_020307.1 3454865 3456805 D COG2199 FOG: GGDEF domain; regulatory protein CsrD 3454865..3456805 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473056.1 CDS CFSAN001992_16680 NC_020307.1 3457113 3458156 D COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB 3457113..3458156 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473057.1 CDS CFSAN001992_16685 NC_020307.1 3458221 3459273 D COG1792 Cell shape-determining protein; rod shape-determining protein MreC 3458221..3459273 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473058.1 CDS CFSAN001992_16690 NC_020307.1 3459276 3459764 D COG2891 Cell shape-determining protein; rod shape-determining protein MreD 3459276..3459764 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473059.1 CDS CFSAN001992_16695 NC_020307.1 3459773 3460366 D COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 3459773..3460366 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473060.1 CDS CFSAN001992_16700 NC_020307.1 3460356 3461825 D COG1530 Ribonucleases G and E; ribonuclease G 3460356..3461825 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473061.1 CDS CFSAN001992_16705 NC_020307.1 3461932 3465732 D COG3164 Predicted membrane protein; hypothetical protein 3461932..3465732 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473062.1 CDS tldD NC_020307.1 3465877 3467322 D COG0312 Predicted Zn-dependent proteases and their inactivated homologs; protease TldD 3465877..3467322 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473063.1 CDS CFSAN001992_16715 NC_020307.1 3467444 3468373 R COG0583 Transcriptional regulator; transcriptional regulator complement(3467444..3468373) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473064.1 CDS CFSAN001992_16720 NC_020307.1 3468555 3468758 D efflux system membrane protein 3468555..3468758 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473065.1 CDS CFSAN001992_16725 NC_020307.1 3468766 3469698 D COG1566 Multidrug resistance efflux pump; p-hydroxybenzoic acid efflux subunit AaeA 3468766..3469698 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473066.1 CDS CFSAN001992_16730 NC_020307.1 3469704 3471671 D COG1289 Predicted membrane protein; p-hydroxybenzoic acid efflux subunit AaeB 3469704..3471671 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473067.1 CDS CFSAN001992_16735 NC_020307.1 3471843 3472115 D putative barnase inhibitor 3471843..3472115 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473068.1 CDS CFSAN001992_16740 NC_020307.1 3472175 3472441 R Protein ydgH Flags: Precursor complement(3472175..3472441) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473069.1 CDS CFSAN001992_16745 NC_020307.1 3472545 3472808 R Protein ydgH Flags: Precursor complement(3472545..3472808) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473070.1 CDS CFSAN001992_16750 NC_020307.1 3473173 3473643 R COG1438 Arginine repressor; arginine repressor complement(3473173..3473643) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473071.1 CDS CFSAN001992_16755 NC_020307.1 3474058 3474996 D COG0039 Malate/lactate dehydrogenases; malate dehydrogenase 3474058..3474996 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473072.1 CDS CFSAN001992_16760 NC_020307.1 3475116 3475745 D COG1802 Transcriptional regulators; Gluconate operon transcriptional repressor P28 protein 3475116..3475745 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473073.1 CDS CFSAN001992_16765 NC_020307.1 3475732 3476397 D COG1802 Transcriptional regulators; transcriptional regulator 3475732..3476397 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473074.1 CDS CFSAN001992_16770 NC_020307.1 3476608 3477876 D COG0471 Di- and tricarboxylate transporters; Solute carrier family 13 member 5 3476608..3477876 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473075.1 CDS CFSAN001992_16775 NC_020307.1 3477909 3478808 D COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; tartrate dehydratase subunit alpha 3477909..3478808 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473076.1 CDS CFSAN001992_16780 NC_020307.1 3478808 3479425 D COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain; L(+)-tartrate dehydratase subunit beta 3478808..3479425 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473077.1 CDS CFSAN001992_16785 NC_020307.1 3479582 3479830 D oxaloacetate decarboxylase subunit gamma 3479582..3479830 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473078.1 CDS CFSAN001992_16790 NC_020307.1 3479847 3481622 D COG5016 Pyruvate/oxaloacetate carboxyltransferase; oxaloacetate decarboxylase 3479847..3481622 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473079.1 CDS CFSAN001992_16795 NC_020307.1 3481638 3482936 D COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; oxaloacetate decarboxylase beta chain 3481638..3482936 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473080.1 CDS CFSAN001992_16800 NC_020307.1 3482956 3483687 D COG1767 Triphosphoribosyl-dephospho-CoA synthetase; inner membrane protein 3482956..3483687 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473081.1 CDS CFSAN001992_16805 NC_020307.1 3483721 3484791 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine endoprotease complement(3483721..3484791) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473082.1 CDS CFSAN001992_16810 NC_020307.1 3484884 3486251 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine endoprotease complement(3484884..3486251) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473083.1 CDS CFSAN001992_16815 NC_020307.1 3486408 3486806 R COG3105 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3486408..3486806) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473084.1 CDS CFSAN001992_16820 NC_020307.1 3486999 3488123 D COG1485 Predicted ATPase; ATPase 3486999..3488123 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473085.1 CDS CFSAN001992_16825 NC_020307.1 3488425 3488853 D COG0102 Ribosomal protein L13; 50S ribosomal protein L13 3488425..3488853 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473086.1 CDS rpsI NC_020307.1 3488869 3489261 D COG0103 Ribosomal protein S9; 30S ribosomal protein S9 3488869..3489261 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473087.1 CDS CFSAN001992_16835 NC_020307.1 3489419 3490213 D hypothetical protein 3489419..3490213 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473088.1 CDS sspA NC_020307.1 3490476 3491114 D COG0625 Glutathione S-transferase; stringent starvation protein A 3490476..3491114 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473089.1 CDS CFSAN001992_16845 NC_020307.1 3491120 3491620 D COG2969 Stringent starvation protein B; ClpXP protease specificity-enhancing factor 3491120..3491620 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473090.1 CDS CFSAN001992_16850 NC_020307.1 3491729 3492520 D COG2186 Transcriptional regulators; transcriptional regulator NanR 3491729..3492520 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473091.1 CDS CFSAN001992_16855 NC_020307.1 3492655 3493548 D COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; N-acetylneuraminate lyase 3492655..3493548 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473092.1 CDS CFSAN001992_16860 NC_020307.1 3493664 3495154 D COG0477 Permeases of the major facilitator superfamily; sialic acid transporter 3493664..3495154 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473093.1 CDS CFSAN001992_16865 NC_020307.1 3495201 3495890 D COG3010 Putative N-acetylmannosamine-6-phosphate epimerase; N-acetylmannosamine-6-phosphate 2-epimerase 3495201..3495890 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473094.1 CDS CFSAN001992_16870 NC_020307.1 3495887 3496762 D COG1940 Transcriptional regulator/sugar kinase; N-acetylmannosamine kinase 3495887..3496762 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473095.1 CDS CFSAN001992_16875 NC_020307.1 3496759 3497226 D COG2731 Beta-galactosidase, beta subunit; hypothetical protein 3496759..3497226 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473096.1 CDS CFSAN001992_16880 NC_020307.1 3497308 3498588 R COG0402 Cytosine deaminase and related metal-dependent hydrolases; cytosine deaminase complement(3497308..3498588) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473097.1 CDS codB NC_020307.1 3498575 3499828 R COG1457 Purine-cytosine permease and related proteins; cytosine permease complement(3498575..3499828) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473098.1 CDS CFSAN001992_16890 NC_020307.1 3499944 3501047 R COG4804 Uncharacterized conserved protein; hypothetical protein complement(3499944..3501047) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473099.1 CDS gltD NC_020307.1 3501255 3502673 R COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases; glutamate synthase subunit beta complement(3501255..3502673) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473100.1 CDS gltB NC_020307.1 3502683 3507143 R COG0067 Glutamate synthase domain 1; glutamate synthase subunit alpha complement(3502683..3507143) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473101.1 CDS CFSAN001992_16905 NC_020307.1 3507066 3507281 D hypothetical protein 3507066..3507281 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473102.1 CDS CFSAN001992_16910 NC_020307.1 3507815 3508744 D COG1242 Predicted Fe-S oxidoreductase; Fe-S oxidoreductase 3507815..3508744 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473103.1 CDS CFSAN001992_16915 NC_020307.1 3508838 3511174 D COG0642 Signal transduction histidine kinase; aerobic respiration control sensor protein ArcB 3508838..3511174 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473104.1 CDS CFSAN001992_16920 NC_020307.1 3511401 3512054 D COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis; isoprenoid biosynthesis protein 3511401..3512054 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473105.1 CDS mtgA NC_020307.1 3512051 3512779 D COG0744 Membrane carboxypeptidase (penicillin-binding protein); monofunctional biosynthetic peptidoglycan transglycosylase 3512051..3512779 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473106.1 CDS CFSAN001992_16930 NC_020307.1 3512854 3513486 R hypothetical protein complement(3512854..3513486) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473107.1 CDS CFSAN001992_16935 NC_020307.1 3513733 3514005 R COG1925 Phosphotransferase system, HPr-related proteins; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) complement(3513733..3514005) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473108.1 CDS CFSAN001992_16940 NC_020307.1 3514002 3514856 R COG1660 Predicted P-loop-containing kinase; glmZ(sRNA)-inactivating NTPase complement(3514002..3514856) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473109.1 CDS CFSAN001992_16945 NC_020307.1 3514902 3515393 R COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS system nitrogen regulatory protein IIA(Ntr) complement(3514902..3515393) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473110.1 CDS CFSAN001992_16950 NC_020307.1 3515511 3515798 R COG1544 Ribosome-associated protein Y (PSrp-1); ribosome hibernation promoting factor HPF complement(3515511..3515798) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473111.1 CDS CFSAN001992_16955 NC_020307.1 3515821 3517254 R COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 complement(3515821..3517254) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473112.1 CDS CFSAN001992_16960 NC_020307.1 3517302 3518027 R COG1137 ABC-type (unclassified) transport system, ATPase component; lipopolysaccharide ABC transporter ATP-binding protein complement(3517302..3518027) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473113.1 CDS CFSAN001992_16965 NC_020307.1 3518034 3518588 R COG1934 Uncharacterized protein conserved in bacteria; lipopolysaccharide transport periplasmic protein LptA complement(3518034..3518588) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473114.1 CDS CFSAN001992_16970 NC_020307.1 3518557 3519132 R COG3117 Uncharacterized protein conserved in bacteria; lipopolysaccharide exporter periplasmic protein complement(3518557..3519132) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473115.1 CDS CFSAN001992_16975 NC_020307.1 3519129 3519695 R COG1778 Low specificity phosphatase (HAD superfamily); 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(3519129..3519695) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473116.1 CDS CFSAN001992_16980 NC_020307.1 3519716 3520702 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; D-arabinose 5-phosphate isomerase complement(3519716..3520702) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473117.1 CDS CFSAN001992_16985 NC_020307.1 3520716 3521693 R COG0530 Ca2+/Na+ antiporter; calcium/sodium:proton antiporter complement(3520716..3521693) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473118.1 CDS CFSAN001992_16990 NC_020307.1 3521906 3522718 D COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; ABC transporter ATP-binding protein YrbF 3521906..3522718 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473119.1 CDS CFSAN001992_16995 NC_020307.1 3522726 3523508 D COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; toluene ABC transporter permease 3522726..3523508 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473120.1 CDS CFSAN001992_17000 NC_020307.1 3523513 3524064 D COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; hypothetical protein 3523513..3524064 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473121.1 CDS CFSAN001992_17005 NC_020307.1 3524083 3524718 D COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component; ABC transporter periplasmic binding protein MlaC 3524083..3524718 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473122.1 CDS CFSAN001992_17010 NC_020307.1 3524718 3525014 D COG3113 Predicted NTP binding protein (contains STAS domain); hypothetical protein 3524718..3525014 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473123.1 CDS CFSAN001992_17015 NC_020307.1 3525202 3525456 D COG5007 Predicted transcriptional regulator, BolA superfamily; hypothetical protein 3525202..3525456 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473124.1 CDS CFSAN001992_17020 NC_020307.1 3525510 3526769 D COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3525510..3526769 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473125.1 CDS CFSAN001992_17025 NC_020307.1 3526827 3527114 R COG3423 Predicted transcriptional regulator; DNA-binding transcriptional regulator Nlp complement(3526827..3527114) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473126.1 CDS CFSAN001992_17030 NC_020307.1 3527346 3528317 R COG0142 Geranylgeranyl pyrophosphate synthase; octaprenyl diphosphate synthase complement(3527346..3528317) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473127.1 CDS rplU NC_020307.1 3528575 3528886 D COG0261 Ribosomal protein L21; 50S ribosomal protein L21 3528575..3528886 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473128.1 CDS CFSAN001992_17040 NC_020307.1 3529292 3530257 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; putative transporter ybhF 3529292..3530257 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473129.1 CDS obgE NC_020307.1 3530273 3531445 D COG0536 Predicted GTPase; GTPase CgtA 3530273..3531445 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473130.1 CDS CFSAN001992_17050 NC_020307.1 3531576 3533009 R COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); D-alanyl-D-alanine carboxypeptidase/endopeptidase complement(3531576..3533009) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473131.1 CDS CFSAN001992_17055 NC_020307.1 3533102 3533203 D hypothetical protein 3533102..3533203 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473132.1 CDS greA NC_020307.1 3533257 3533733 D COG0782 Transcription elongation factor; transcription elongation factor GreA 3533257..3533733 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473133.1 CDS CFSAN001992_17065 NC_020307.1 3533889 3534182 R COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein; RNA-binding protein YhbY complement(3533889..3534182) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473134.1 CDS rrmJ NC_020307.1 3534309 3534935 D COG0293 23S rRNA methylase; 23S rRNA methyltransferase J 3534309..3534935 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473135.1 CDS hflB NC_020307.1 3535039 3536973 D COG0465 ATP-dependent Zn proteases; ATP-dependent metalloprotease 3535039..3536973 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473136.1 CDS folP NC_020307.1 3537078 3537926 D COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase 3537078..3537926 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473137.1 CDS glmM NC_020307.1 3537919 3539256 D COG1109 Phosphomannomutase; phosphoglucosamine mutase 3537919..3539256 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473138.1 CDS secG NC_020307.1 3539479 3539811 D COG1314 Preprotein translocase subunit SecG; preprotein translocase subunit SecG 3539479..3539811 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473139.1 CDS CFSAN001992_17095 NC_020307.1 3540109 3541452 R COG0137 Argininosuccinate synthase; argininosuccinate synthase complement(3540109..3541452) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473140.1 CDS CFSAN001992_17100 NC_020307.1 3542080 3542532 D COG0779 Uncharacterized protein conserved in bacteria; ribosome maturation protein RimP 3542080..3542532 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473141.1 CDS nusA NC_020307.1 3542560 3544062 D COG0195 Transcription elongation factor; transcription elongation factor NusA 3542560..3544062 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473142.1 CDS infB NC_020307.1 3544087 3546765 D COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 3544087..3546765 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473143.1 CDS rbfA NC_020307.1 3546986 3547387 D COG0858 Ribosome-binding factor A; ribosome-binding factor A 3546986..3547387 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473144.1 CDS truB NC_020307.1 3547387 3548331 D COG0130 Pseudouridine synthase; tRNA pseudouridine synthase B 3547387..3548331 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473145.1 CDS rpsO NC_020307.1 3548482 3548751 D COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 3548482..3548751 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473146.1 CDS CFSAN001992_17130 NC_020307.1 3548993 3551128 D COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase 3548993..3551128 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473147.1 CDS CFSAN001992_17135 NC_020307.1 3551238 3552122 D COG4785 Lipoprotein NlpI, contains TPR repeats; lipoprotein NlpI 3551238..3552122 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473148.1 CDS CFSAN001992_17140 NC_020307.1 3552301 3554190 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase DeaD 3552301..3554190 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473149.1 CDS CFSAN001992_17145 NC_020307.1 3554344 3555588 D COG0814 Amino acid permeases; tryptophan permease 3554344..3555588 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473150.1 CDS CFSAN001992_17150 NC_020307.1 3555679 3556686 R COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases; hypothetical protein complement(3555679..3556686) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473151.1 CDS CFSAN001992_17155 NC_020307.1 3556863 3557741 R COG0826 Collagenase and related proteases; protease complement(3556863..3557741) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473152.1 CDS CFSAN001992_17160 NC_020307.1 3557750 3558745 R COG0826 Collagenase and related proteases; putative collagenase complement(3557750..3558745) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473153.1 CDS CFSAN001992_17165 NC_020307.1 3558962 3559486 D COG3154 Putative lipid carrier protein; hypothetical protein 3558962..3559486 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473154.1 CDS CFSAN001992_17170 NC_020307.1 3559480 3559983 D COG3153 Predicted acetyltransferase; putative acetyltransferase 3559480..3559983 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473155.1 CDS CFSAN001992_17175 NC_020307.1 3559970 3560272 R COG2827 Predicted endonuclease containing a URI domain; GIY-YIG nuclease superfamily protein complement(3559970..3560272) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473156.1 CDS CFSAN001992_17180 NC_020307.1 3560325 3560768 D COG3787 Uncharacterized protein conserved in bacteria; hypothetical protein 3560325..3560768 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473157.1 CDS CFSAN001992_17185 NC_020307.1 3560748 3561266 R COG0693 Putative intracellular protease/amidase; General stress protein 18 GSP18 complement(3560748..3561266) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473158.1 CDS CFSAN001992_17190 NC_020307.1 3561397 3562032 D COG0702 Predicted nucleoside-diphosphate-sugar epimerases; putative nucleoside-diphosphate-sugar epimerase 3561397..3562032 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473159.1 CDS CFSAN001992_17195 NC_020307.1 3562099 3562674 R COG2823 Predicted periplasmic or secreted lipoprotein; outer membrane lipoprotein complement(3562099..3562674) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473160.1 CDS CFSAN001992_17200 NC_020307.1 3562684 3563274 R COG0279 Phosphoheptose isomerase; DnaA initiator-associating protein DiaA complement(3562684..3563274) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473161.1 CDS CFSAN001992_17205 NC_020307.1 3563296 3563691 R COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; hypothetical protein complement(3563296..3563691) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473162.1 CDS CFSAN001992_17210 NC_020307.1 3563649 3565691 R COG3107 Putative lipoprotein; LppC family lipoprotein complement(3563649..3565691) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473163.1 CDS CFSAN001992_17215 NC_020307.1 3565755 3566618 D COG0313 Predicted methyltransferases; SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase 3565755..3566618 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473164.1 CDS CFSAN001992_17220 NC_020307.1 3566672 3566764 D hypothetical protein 3566672..3566764 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473165.1 CDS CFSAN001992_17225 NC_020307.1 3566776 3567549 R COG1349 Transcriptional regulators of sugar metabolism; galactitol utilization operon repressor complement(3566776..3567549) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473166.1 CDS CFSAN001992_17230 NC_020307.1 3567660 3568703 R COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; galactitol-1-phosphate dehydrogenase complement(3567660..3568703) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473167.1 CDS gatC NC_020307.1 3568747 3570120 R COG3775 Phosphotransferase system, galactitol-specific IIC component; PTS system galactitol-specific transporter subunit IIC complement(3568747..3570120) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473168.1 CDS CFSAN001992_17240 NC_020307.1 3570124 3570408 R COG3414 Phosphotransferase system, galactitol-specific IIB component; PTS system galactitol-specific transporter subunit IIB complement(3570124..3570408) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473169.1 CDS CFSAN001992_17245 NC_020307.1 3570439 3570903 R COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS system galactitol-specific transporter subunit IIA complement(3570439..3570903) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473170.1 CDS CFSAN001992_17250 NC_020307.1 3570918 3572189 R COG4573 Predicted tagatose 6-phosphate kinase; D-tagatose-1,6-bisphosphate aldolase subunit GatZ complement(3570918..3572189) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473171.1 CDS CFSAN001992_17255 NC_020307.1 3572387 3573193 R COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain; PTS-transport family phosphoryl transfer protein complement(3572387..3573193) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473172.1 CDS CFSAN001992_17260 NC_020307.1 3573180 3574607 R COG1445 Phosphotransferase system fructose-specific component IIB; PTS system fructose-specific transporter subunit IIBC complement(3573180..3574607) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473173.1 CDS CFSAN001992_17265 NC_020307.1 3574634 3575548 R COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); putative fructose-1-phosphate kinase complement(3574634..3575548) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473174.1 CDS gatY NC_020307.1 3575559 3576413 R COG0191 Fructose/tagatose bisphosphate aldolase; tagatose-bisphosphate aldolase complement(3575559..3576413) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473175.1 CDS CFSAN001992_17275 NC_020307.1 3576747 3577580 D COG1349 Transcriptional regulators of sugar metabolism; transcriptional regulator DeoR 3576747..3577580 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473176.1 CDS CFSAN001992_17280 NC_020307.1 3577591 3578538 D COG0524 Sugar kinases, ribokinase family; carbohydrate kinase 3577591..3578538 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473177.1 CDS garD NC_020307.1 3578778 3580349 R COG2721 Altronate dehydratase; galactarate dehydrogenase complement(3578778..3580349) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473178.1 CDS CFSAN001992_17290 NC_020307.1 3580879 3581649 D COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; alpha-dehydro-beta-deoxy-D-glucarate aldolase 3580879..3581649 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473179.1 CDS garR NC_020307.1 3581675 3582565 D COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; tartronate semialdehyde reductase 3581675..3582565 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473180.1 CDS CFSAN001992_17300 NC_020307.1 3582663 3583808 D COG1929 Glycerate kinase; glycerate kinase I 3582663..3583808 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473181.1 CDS CFSAN001992_17305 NC_020307.1 3584511 3584750 R hypothetical protein complement(3584511..3584750) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473182.1 CDS CFSAN001992_17310 NC_020307.1 3585382 3586320 D COG0583 Transcriptional regulator; DNA-binding transcriptional activator TdcA 3585382..3586320 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473183.1 CDS CFSAN001992_17315 NC_020307.1 3586418 3587407 D COG1171 Threonine dehydratase; threonine dehydratase 3586418..3587407 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473184.1 CDS CFSAN001992_17320 NC_020307.1 3587428 3588759 D COG0814 Amino acid permeases; threonine/serine transporter TdcC 3587428..3588759 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473185.1 CDS CFSAN001992_17325 NC_020307.1 3588826 3590034 D COG0282 Acetate kinase; propionate/acetate kinase 3588826..3590034 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473186.1 CDS CFSAN001992_17330 NC_020307.1 3590068 3592362 D COG1882 Pyruvate-formate lyase; keto-acid formate acetyltransferase 3590068..3592362 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473187.1 CDS CFSAN001992_17335 NC_020307.1 3592432 3593796 D COG1760 L-serine deaminase; L-serine dehydratase TdcG 3592432..3593796 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473188.1 CDS CFSAN001992_17340 NC_020307.1 3594112 3595368 D COG0814 Amino acid permeases; Threonine/serine transporter tdcC H(+)/threonine-serine symporter 3594112..3595368 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473189.1 CDS CFSAN001992_17345 NC_020307.1 3595468 3596778 D COG3681 Uncharacterized conserved protein; UPF0597 protein yhaM 3595468..3596778 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473190.1 CDS CFSAN001992_17350 NC_020307.1 3596891 3597055 R cytoplasmic protein complement(3596891..3597055) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473191.1 CDS CFSAN001992_17355 NC_020307.1 3597079 3597780 R COG1741 Pirin-related protein; pirin complement(3597079..3597780) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473192.1 CDS CFSAN001992_17360 NC_020307.1 3597885 3598781 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 3597885..3598781 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473193.1 CDS CFSAN001992_17365 NC_020307.1 3598820 3599185 R COG3152 Predicted membrane protein; Inner membrane protein yhaH complement(3598820..3599185) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473194.1 CDS CFSAN001992_17370 NC_020307.1 3599309 3600295 R COG0435 Predicted glutathione S-transferase; glutathione S-transferase complement(3599309..3600295) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473195.1 CDS CFSAN001992_17375 NC_020307.1 3600363 3600755 R COG2259 Predicted membrane protein; hypothetical protein complement(3600363..3600755) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473196.1 CDS CFSAN001992_17380 NC_020307.1 3601003 3601302 R hypothetical protein complement(3601003..3601302) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473197.1 CDS CFSAN001992_17385 NC_020307.1 3601299 3601697 R Inner membrane protein yqjE complement(3601299..3601697) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473198.1 CDS CFSAN001992_17390 NC_020307.1 3601700 3602005 R hypothetical protein complement(3601700..3602005) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473199.1 CDS CFSAN001992_17395 NC_020307.1 3602047 3602415 R Protein yqjC Flags: Precursor complement(3602047..3602415) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473200.1 CDS CFSAN001992_17400 NC_020307.1 3602560 3602943 R EnvZ/OmpR regulon moderator complement(3602560..3602943) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473201.1 CDS CFSAN001992_17405 NC_020307.1 3602947 3603609 R COG0586 Uncharacterized membrane-associated protein; Inner membrane protein yghB complement(3602947..3603609) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473202.1 CDS CFSAN001992_17410 NC_020307.1 3604059 3605303 R COG3633 Na+/serine symporter; serine/threonine transporter SstT complement(3604059..3605303) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473203.1 CDS CFSAN001992_17415 NC_020307.1 3605558 3606526 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; Inner membrane protein alx complement(3605558..3606526) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473204.1 CDS CFSAN001992_17420 NC_020307.1 3606797 3607795 R COG0673 Predicted dehydrogenases and related proteins; oxidoreductase complement(3606797..3607795) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473205.1 CDS CFSAN001992_17425 NC_020307.1 3607884 3608576 R COG2949 Uncharacterized membrane protein; hypothetical protein complement(3607884..3608576) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473206.1 CDS CFSAN001992_17430 NC_020307.1 3608728 3609225 R COG1451 Predicted metal-dependent hydrolase; hypothetical protein complement(3608728..3609225) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473207.1 CDS CFSAN001992_17435 NC_020307.1 3609311 3610447 D COG2813 16S RNA G1207 methylase RsmC; SAM-dependent 23S ribosomal RNA mG1835 methyltransferase 3609311..3610447 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473208.1 CDS fadH NC_020307.1 3610528 3612546 R COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; 2,4-dienoyl-CoA reductase complement(3610528..3612546) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473209.1 CDS CFSAN001992_17445 NC_020307.1 3612717 3614123 R COG4992 Ornithine/acetylornithine aminotransferase; putrescine--2-oxoglutarate aminotransferase complement(3612717..3614123) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473210.1 CDS CFSAN001992_17450 NC_020307.1 3614526 3616046 D COG2202 FOG: PAS/PAC domain; aerotaxis receptor protein 3614526..3616046 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473211.1 CDS CFSAN001992_17455 NC_020307.1 3616433 3618001 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein II 3616433..3618001 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473212.1 CDS CFSAN001992_17460 NC_020307.1 3617998 3618642 R COG1695 Predicted transcriptional regulators; transcriptional regulator complement(3617998..3618642) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473213.1 CDS CFSAN001992_17465 NC_020307.1 3618877 3619644 D COG2375 Siderophore-interacting protein; siderophore-interacting protein 3618877..3619644 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473214.1 CDS CFSAN001992_17470 NC_020307.1 3619925 3620431 D COG3663 G:T/U mismatch-specific DNA glycosylase; G/U mismatch-specific DNA glycosylase 3619925..3620431 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473215.1 CDS CFSAN001992_17475 NC_020307.1 3620555 3622402 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD complement(3620555..3622402) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473216.1 CDS dnaG NC_020307.1 3622552 3624297 R COG0358 DNA primase (bacterial type); DNA primase complement(3622552..3624297) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473217.1 CDS CFSAN001992_17485 NC_020307.1 3624533 3624748 R COG0828 Ribosomal protein S21; 30S ribosomal protein S21 complement(3624533..3624748) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473218.1 CDS CFSAN001992_17490 NC_020307.1 3624976 3625989 D COG0533 Metal-dependent proteases with possible chaperone activity; UGMP family protein 3624976..3625989 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473219.1 CDS CFSAN001992_17495 NC_020307.1 3626013 3626207 D hypothetical protein 3626013..3626207 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473220.1 CDS CFSAN001992_17500 NC_020307.1 3626212 3626829 R COG0344 Predicted membrane protein; glycerol-3-phosphate acyltransferase PlsY complement(3626212..3626829) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473221.1 CDS folB NC_020307.1 3626936 3627295 D COG1539 Dihydroneopterin aldolase; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 3626936..3627295 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473222.1 CDS CFSAN001992_17510 NC_020307.1 3627393 3628214 D COG1968 Uncharacterized bacitracin resistance protein; undecaprenyl pyrophosphate phosphatase 3627393..3628214 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473223.1 CDS cca NC_020307.1 3628319 3629560 R COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase complement(3628319..3629560) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473224.1 CDS CFSAN001992_17520 NC_020307.1 3629623 3630237 R COG3103 SH3 domain protein; hypothetical protein complement(3629623..3630237) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473225.1 CDS CFSAN001992_17525 NC_020307.1 3630479 3631780 D COG3025 Uncharacterized conserved protein; adenylate cyclase 3630479..3631780 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473226.1 CDS CFSAN001992_17530 NC_020307.1 3631898 3634741 D COG1391 Glutamine synthetase adenylyltransferase; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3631898..3634741 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473227.1 CDS CFSAN001992_17535 NC_020307.1 3634789 3636222 D COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3634789..3636222 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473228.1 CDS CFSAN001992_17540 NC_020307.1 3636647 3638326 R COG2268 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3636647..3638326) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473229.1 CDS CFSAN001992_17545 NC_020307.1 3638345 3638965 R Inner membrane protein yqiJ complement(3638345..3638965) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473230.1 CDS CFSAN001992_17550 NC_020307.1 3639223 3639432 D glycogen synthesis protein GlgS 3639223..3639432 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473231.1 CDS CFSAN001992_17555 NC_020307.1 3639506 3639802 R COG2960 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3639506..3639802) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473232.1 CDS ribB NC_020307.1 3640239 3640892 D COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3640239..3640892 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473233.1 CDS CFSAN001992_17565 NC_020307.1 3641063 3641740 R COG1495 Disulfide bond formation protein DsbB; disulfide oxidoreductase complement(3641063..3641740) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473234.1 CDS CFSAN001992_17570 NC_020307.1 3641755 3642426 R COG0526 Thiol-disulfide isomerase and thioredoxins; disulfide isomerase complement(3641755..3642426) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473235.1 CDS CFSAN001992_17575 NC_020307.1 3642446 3644242 R arylsulfate sulfotransferase complement(3642446..3644242) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473236.1 CDS CFSAN001992_17580 NC_020307.1 3644642 3644818 D hypothetical protein 3644642..3644818 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473237.1 CDS CFSAN001992_17585 NC_020307.1 3644885 3645658 R COG0428 Predicted divalent heavy-metal cations transporter; zinc transporter ZupT complement(3644885..3645658) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473238.1 CDS CFSAN001992_17590 NC_020307.1 3645799 3646587 D COG3384 Uncharacterized conserved protein; LigB family dioxygenase 3645799..3646587 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473239.1 CDS CFSAN001992_17595 NC_020307.1 3646649 3647812 R COG0754 Glutathionylspermidine synthase; glutathionylspermidine synthase complement(3646649..3647812) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473240.1 CDS CFSAN001992_17600 NC_020307.1 3647818 3648489 R COG5463 Predicted integral membrane protein; hypothetical protein complement(3647818..3648489) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473241.1 CDS tolC NC_020307.1 3648702 3650171 R COG1538 Outer membrane protein; outer membrane channel protein complement(3648702..3650171) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473242.1 CDS nudF NC_020307.1 3650378 3651010 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; ADP-ribose pyrophosphatase NudF 3650378..3651010 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473243.1 CDS CFSAN001992_17615 NC_020307.1 3651007 3651429 D COG3151 Uncharacterized protein conserved in bacteria; dehydrogenase 3651007..3651429 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473244.1 CDS CFSAN001992_17620 NC_020307.1 3651454 3652281 D COG1409 Predicted phosphohydrolases; cyclic 3',5'-adenosine monophosphate phosphodiesterase 3651454..3652281 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473245.1 CDS CFSAN001992_17625 NC_020307.1 3652281 3652862 D COG3150 Predicted esterase; esterase YqiA 3652281..3652862 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473246.1 CDS CFSAN001992_17630 NC_020307.1 3652890 3654782 D COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA topoisomerase IV subunit B 3652890..3654782 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473247.1 CDS CFSAN001992_17635 NC_020307.1 3654907 3655221 R COG1359 Uncharacterized conserved protein; quinol monooxygenase complement(3654907..3655221) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473248.1 CDS CFSAN001992_17640 NC_020307.1 3655253 3655834 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); NADPH quinone reductase MdaB complement(3655253..3655834) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473249.1 CDS CFSAN001992_17645 NC_020307.1 3655941 3657290 R COG0642 Signal transduction histidine kinase; sensor protein QseC complement(3655941..3657290) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473250.1 CDS CFSAN001992_17650 NC_020307.1 3657287 3657946 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; DNA-binding transcriptional regulator QseB complement(3657287..3657946) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473251.1 CDS CFSAN001992_17655 NC_020307.1 3658098 3658490 D COG3111 Uncharacterized conserved protein; hypothetical protein 3658098..3658490 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473252.1 CDS CFSAN001992_17660 NC_020307.1 3658620 3660878 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA topoisomerase IV subunit A 3658620..3660878 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473253.1 CDS CFSAN001992_17665 NC_020307.1 3661135 3661872 D COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 3661135..3661872 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473254.1 CDS CFSAN001992_17670 NC_020307.1 3661946 3663358 D COG2132 Putative multicopper oxidases; FtsI repressor 3661946..3663358 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473255.1 CDS CFSAN001992_17685 NC_020307.1 3664428 3665849 D COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; hypothetical protein 3664428..3665849 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473256.1 CDS CFSAN001992_17690 NC_020307.1 3665865 3667289 D hypothetical protein 3665865..3667289 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473257.1 CDS CFSAN001992_17695 NC_020307.1 3667354 3668775 D hypothetical protein 3667354..3668775 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473258.1 CDS CFSAN001992_17700 NC_020307.1 3668909 3671080 D COG1032 Fe-S oxidoreductase; hypothetical protein 3668909..3671080 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473259.1 CDS CFSAN001992_17705 NC_020307.1 3671247 3671477 D hypothetical protein 3671247..3671477 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473260.1 CDS CFSAN001992_17710 NC_020307.1 3671635 3672090 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; histidine triad complement(3671635..3672090) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473261.1 CDS CFSAN001992_17715 NC_020307.1 3672134 3673588 R COG0471 Di- and tricarboxylate transporters; membrane transport protein complement(3672134..3673588) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473262.1 CDS dkgA NC_020307.1 3673785 3674612 R COG0656 Aldo/keto reductases, related to diketogulonate reductase; 2,5-diketo-D-gluconate reductase A complement(3673785..3674612) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473263.1 CDS CFSAN001992_17725 NC_020307.1 3674718 3675881 R COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family; aldehyde reductase complement(3674718..3675881) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473264.1 CDS CFSAN001992_17730 NC_020307.1 3676056 3676973 D COG2207 AraC-type DNA-binding domain-containing proteins; putative HTH-type transcriptional regulator yqhC 3676056..3676973 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473265.1 CDS CFSAN001992_17735 NC_020307.1 3677037 3677696 R COG0586 Uncharacterized membrane-associated protein; DedA-family integral membrane protein complement(3677037..3677696) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473266.1 CDS CFSAN001992_17740 NC_020307.1 3677836 3679023 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine beta-lyase complement(3677836..3679023) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473267.1 CDS CFSAN001992_17745 NC_020307.1 3679133 3679282 D putative inner membrane protein 3679133..3679282 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473268.1 CDS CFSAN001992_17750 NC_020307.1 3679275 3680009 D COG0811 Biopolymer transport proteins; biopolymer transport protein ExbB 3679275..3680009 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473269.1 CDS CFSAN001992_17755 NC_020307.1 3680016 3680441 D COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 3680016..3680441 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473270.1 CDS CFSAN001992_17760 NC_020307.1 3680554 3681438 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); oxidoreductase complement(3680554..3681438) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473271.1 CDS CFSAN001992_17765 NC_020307.1 3681562 3681966 R hypothetical protein complement(3681562..3681966) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473272.1 CDS CFSAN001992_17770 NC_020307.1 3681953 3682363 R hypothetical protein complement(3681953..3682363) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473273.1 CDS CFSAN001992_17775 NC_020307.1 3682467 3682970 D hypothetical protein 3682467..3682970 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473274.1 CDS CFSAN001992_17780 NC_020307.1 3683041 3683535 D COG2862 Predicted membrane protein; hypothetical protein 3683041..3683535 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473275.1 CDS CFSAN001992_17785 NC_020307.1 3683842 3685485 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3683842..3685485 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473276.1 CDS CFSAN001992_17790 NC_020307.1 3685570 3685857 D hypothetical protein 3685570..3685857 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473277.1 CDS CFSAN001992_17795 NC_020307.1 3686047 3687165 D COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase 2 small subunit 3686047..3687165 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473278.1 CDS CFSAN001992_17800 NC_020307.1 3687168 3688154 D COG0437 Fe-S-cluster-containing hydrogenase components 1; hydrogenase 2 protein HybA 3687168..3688154 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473279.1 CDS CFSAN001992_17805 NC_020307.1 3688144 3689322 D COG5557 Polysulphide reductase; hydrogenase 2 b cytochrome subunit 3688144..3689322 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473280.1 CDS CFSAN001992_17810 NC_020307.1 3689319 3691022 D COG0374 Ni,Fe-hydrogenase I large subunit; hydrogenase 2 large subunit 3689319..3691022 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473281.1 CDS hybD NC_020307.1 3691022 3691516 D COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase 2 maturation endopeptidase 3691022..3691516 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473282.1 CDS CFSAN001992_17820 NC_020307.1 3691509 3691997 D hydrogenase 2-specific chaperone 3691509..3691997 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473283.1 CDS CFSAN001992_17825 NC_020307.1 3691990 3692331 D COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein HybF 3691990..3692331 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473284.1 CDS CFSAN001992_17830 NC_020307.1 3692359 3692607 D COG0298 Hydrogenase maturation factor; hydrogenase 2 accessory protein HypG 3692359..3692607 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473285.1 CDS CFSAN001992_17835 NC_020307.1 3692683 3693735 D COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; periplasmic binding protein 3692683..3693735 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473286.1 CDS CFSAN001992_17840 NC_020307.1 3693735 3694445 D COG0725 ABC-type molybdate transport system, periplasmic component; molybdate ABC transporter periplasmic molybdate-binding protein 3693735..3694445 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473287.1 CDS CFSAN001992_17845 NC_020307.1 3694513 3695379 R COG0625 Glutathione S-transferase; S-transferase complement(3694513..3695379) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473288.1 CDS CFSAN001992_17850 NC_020307.1 3695606 3697462 D COG0754 Glutathionylspermidine synthase; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 3695606..3697462 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473289.1 CDS CFSAN001992_17855 NC_020307.1 3698132 3698275 D hypothetical protein 3698132..3698275 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473290.1 CDS CFSAN001992_17860 NC_020307.1 3698275 3699186 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 3698275..3699186 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473291.1 CDS CFSAN001992_17865 NC_020307.1 3699486 3700898 R COG1904 Glucuronate isomerase; glucuronate isomerase complement(3699486..3700898) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473292.1 CDS CFSAN001992_17870 NC_020307.1 3700910 3702382 R COG0246 Mannitol-1-phosphate/altronate dehydrogenases; D-mannonate oxidoreductase complement(3700910..3702382) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473293.1 CDS CFSAN001992_17875 NC_020307.1 3702493 3703677 R COG1312 D-mannonate dehydratase; mannonate dehydratase complement(3702493..3703677) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473294.1 CDS CFSAN001992_17880 NC_020307.1 3704082 3705386 D COG0477 Permeases of the major facilitator superfamily; hexuronate transporter ExuT 3704082..3705386 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473295.1 CDS CFSAN001992_17885 NC_020307.1 3705466 3706731 R outer membrane porin protein complement(3705466..3706731) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473296.1 CDS CFSAN001992_17890 NC_020307.1 3706767 3708140 R COG2211 Na+/melibiose symporter and related transporters; glucuronide transporter complement(3706767..3708140) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473297.1 CDS CFSAN001992_17895 NC_020307.1 3708137 3709948 R COG3250 Beta-galactosidase/beta-glucuronidase; beta-D-glucuronidase complement(3708137..3709948) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473298.1 CDS CFSAN001992_17900 NC_020307.1 3710323 3710919 D COG1309 Transcriptional regulator; transcriptional regulator UidR 3710323..3710919 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473299.1 CDS CFSAN001992_17905 NC_020307.1 3711232 3712110 D COG0388 Predicted amidohydrolase; amidohydrolase 3711232..3712110 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473300.1 CDS CFSAN001992_17910 NC_020307.1 3712149 3713072 D COG0726 Predicted xylanase/chitin deacetylase; Polysaccharide deacetylase domain protein 3712149..3713072 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473301.1 CDS CFSAN001992_17915 NC_020307.1 3713644 3713799 R hypothetical protein complement(3713644..3713799) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473302.1 CDS CFSAN001992_17920 NC_020307.1 3713798 3714283 D COG3157 Hemolysin-coregulated protein (uncharacterized); hypothetical protein 3713798..3714283 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473303.1 CDS iraD NC_020307.1 3714454 3714663 D DNA replication/recombination/repair protein 3714454..3714663 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473304.1 CDS CFSAN001992_17930 NC_020307.1 3714799 3716283 R COG1012 NAD-dependent aldehyde dehydrogenases; phenylacetaldehyde dehydrogenase complement(3714799..3716283) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473305.1 CDS CFSAN001992_17935 NC_020307.1 3716445 3717746 D COG0665 Glycine/D-amino acid oxidases (deaminating); tyramine oxidase 3716445..3717746 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473306.1 CDS CFSAN001992_17940 NC_020307.1 3717761 3718135 D COG3450 Predicted enzyme of the cupin superfamily; hypothetical protein 3717761..3718135 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473307.1 CDS CFSAN001992_17945 NC_020307.1 3718344 3719843 D COG0531 Amino acid transporters; Y+L amino acid transporter 2 3718344..3719843 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473308.1 CDS CFSAN001992_17950 NC_020307.1 3719821 3720378 D cytoplasmic protein 3719821..3720378 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473309.1 CDS CFSAN001992_17955 NC_020307.1 3720483 3721166 R COG2771 DNA-binding HTH domain-containing proteins; LysR family transcriptional regulator complement(3720483..3721166) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473310.1 CDS CFSAN001992_17960 NC_020307.1 3721677 3722861 D COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); arylsulfatase 3721677..3722861 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473311.1 CDS CFSAN001992_17965 NC_020307.1 3722930 3724669 D COG3119 Arylsulfatase A and related enzymes; arylsulfatase 3722930..3724669 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473312.1 CDS CFSAN001992_17970 NC_020307.1 3724717 3725595 R COG0583 Transcriptional regulator; StmR complement(3724717..3725595) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473313.1 CDS CFSAN001992_17975 NC_020307.1 3725687 3726529 D COG2301 Citrate lyase beta subunit; putative citrate lyase beta chain 3725687..3726529 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473314.1 CDS CFSAN001992_17980 NC_020307.1 3726553 3727080 D COG2030 Acyl dehydratase; Protein maoC Phenylacetic acid degradation protein paaZ 3726553..3727080 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473315.1 CDS CFSAN001992_17985 NC_020307.1 3727108 3728430 D COG0427 Acetyl-CoA hydrolase; 4-hydroxybutyrate CoA-transferase 3727108..3728430 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473316.1 CDS CFSAN001992_17990 NC_020307.1 3728495 3728875 D COG0346 Lactoylglutathione lyase and related lyases; Glyoxalase domain-containing protein 5 3728495..3728875 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473317.1 CDS CFSAN001992_17995 NC_020307.1 3729215 3729922 R COG1811 Uncharacterized membrane protein, possible Na+ channel or pump; hypothetical protein complement(3729215..3729922) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473318.1 CDS CFSAN001992_18000 NC_020307.1 3729961 3730074 R hypothetical protein complement(3729961..3730074) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473319.1 CDS CFSAN001992_18005 NC_020307.1 3730348 3732483 D COG1982 Arginine/lysine/ornithine decarboxylases; ornithine decarboxylase 3730348..3732483 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473320.1 CDS CFSAN001992_18010 NC_020307.1 3732545 3733801 R COG0477 Permeases of the major facilitator superfamily; nucleoside permease NupG complement(3732545..3733801) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473321.1 CDS mltC NC_020307.1 3734018 3735100 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); murein transglycosylase C complement(3734018..3735100) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473322.1 CDS CFSAN001992_18020 NC_020307.1 3735216 3735491 R COG2924 Fe-S cluster protector protein; oxidative damage protection protein complement(3735216..3735491) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473323.1 CDS CFSAN001992_18025 NC_020307.1 3735519 3736571 R COG1194 A/G-specific DNA glycosylase; adenine DNA glycosylase complement(3735519..3736571) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473324.1 CDS trmB NC_020307.1 3736726 3737445 D COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 3736726..3737445 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473325.1 CDS CFSAN001992_18035 NC_020307.1 3737445 3737771 D COG3171 Uncharacterized protein conserved in bacteria; hypothetical protein 3737445..3737771 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473326.1 CDS CFSAN001992_18040 NC_020307.1 3737821 3738540 D hypothetical protein 3737821..3738540 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473327.1 CDS ansB NC_020307.1 3738729 3739775 D COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; L-asparaginase II 3738729..3739775 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473328.1 CDS CFSAN001992_18050 NC_020307.1 3739908 3740915 D hypothetical protein 3739908..3740915 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473329.1 CDS CFSAN001992_18055 NC_020307.1 3741006 3742142 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; HemN family oxidoreductase complement(3741006..3742142) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473330.1 CDS CFSAN001992_18060 NC_020307.1 3742135 3742728 R COG0127 Xanthosine triphosphate pyrophosphatase; dITP/XTP pyrophosphatase complement(3742135..3742728) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473331.1 CDS CFSAN001992_18065 NC_020307.1 3742736 3743026 R COG1872 Uncharacterized conserved protein; hypothetical protein complement(3742736..3743026) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473332.1 CDS CFSAN001992_18070 NC_020307.1 3743023 3743589 R COG0762 Predicted integral membrane protein; resistance protein complement(3743023..3743589) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473333.1 CDS CFSAN001992_18075 NC_020307.1 3743608 3744312 R COG0325 Predicted enzyme with a TIM-barrel fold; hypothetical protein complement(3743608..3744312) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473334.1 CDS CFSAN001992_18080 NC_020307.1 3744330 3745310 D COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT; twitching mobility protein 3744330..3745310 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473335.1 CDS CFSAN001992_18085 NC_020307.1 3745442 3746128 D COG1414 Transcriptional regulator; IclR family transcriptional regulator 3745442..3746128 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473336.1 CDS CFSAN001992_18090 NC_020307.1 3746175 3746591 R COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein complement(3746175..3746591) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473337.1 CDS CFSAN001992_18095 NC_020307.1 3746591 3747154 R COG1678 Putative transcriptional regulator; hypothetical protein complement(3746591..3747154) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473338.1 CDS CFSAN001992_18100 NC_020307.1 3747370 3748317 R COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); glutathione synthetase complement(3747370..3748317) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473339.1 CDS CFSAN001992_18105 NC_020307.1 3748337 3749068 R COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE complement(3748337..3749068) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473340.1 CDS CFSAN001992_18110 NC_020307.1 3749145 3749852 R COG2356 Endonuclease I; DNA-specific endonuclease I complement(3749145..3749852) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473341.1 CDS CFSAN001992_18115 NC_020307.1 3749947 3750444 R COG3091 Uncharacterized protein conserved in bacteria; hypothetical protein complement(3749947..3750444) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473342.1 CDS CFSAN001992_18120 NC_020307.1 3750523 3751917 R COG0477 Permeases of the major facilitator superfamily; D-galactose transporter GalP complement(3750523..3751917) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473343.1 CDS CFSAN001992_18125 NC_020307.1 3752410 3753564 R COG0192 S-adenosylmethionine synthetase; S-adenosylmethionine synthetase complement(3752410..3753564) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473344.1 CDS CFSAN001992_18130 NC_020307.1 3753620 3753919 D putative inner membrane protein 3753620..3753919 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473345.1 CDS CFSAN001992_18135 NC_020307.1 3754214 3754345 D hypothetical protein 3754214..3754345 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473346.1 CDS CFSAN001992_18140 NC_020307.1 3754354 3756330 D COG1166 Arginine decarboxylase (spermidine biosynthesis); arginine decarboxylase 3754354..3756330 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473347.1 CDS CFSAN001992_18145 NC_020307.1 3756558 3757478 D COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; agmatinase 3756558..3757478 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473348.1 CDS CFSAN001992_18150 NC_020307.1 3757579 3758337 R COG0501 Zn-dependent protease with chaperone function; hypothetical protein complement(3757579..3758337) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473349.1 CDS CFSAN001992_18155 NC_020307.1 3758613 3760604 D COG0021 Transketolase; transketolase 3758613..3760604 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473350.1 CDS cmtB NC_020307.1 3760916 3761359 D COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS system mannitol-specific transporter subunit IIA 3760916..3761359 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473351.1 CDS CFSAN001992_18165 NC_020307.1 3761387 3762766 D COG2213 Phosphotransferase system, mannitol-specific IIBC component; PTS system mannitol-specific transporter subunit IIBC 3761387..3762766 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473352.1 CDS CFSAN001992_18170 NC_020307.1 3762790 3764064 D COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; L-sorbose 1-phosphate reductase 3762790..3764064 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473353.1 CDS CFSAN001992_18175 NC_020307.1 3764061 3765032 D COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins; fructose-1,6-bisphosphatase II-like protein 3764061..3765032 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473354.1 CDS CFSAN001992_18180 NC_020307.1 3765246 3765755 D COG3722 Transcriptional regulator; DNA-binding transcriptional regulator 3765246..3765755 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473355.1 CDS CFSAN001992_18185 NC_020307.1 3765752 3766468 D COG1072 Panthothenate kinase; nucleoside triphosphate hydrolase domain-containing protein 3765752..3766468 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473356.1 CDS CFSAN001992_18190 NC_020307.1 3766437 3767126 R COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; ABC-type cobalt transport system, ATPase component complement(3766437..3767126) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473357.1 CDS CFSAN001992_18195 NC_020307.1 3767120 3767797 R COG1122 ABC-type cobalt transport system, ATPase component; ABC transporter ATP-binding protein complement(3767120..3767797) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473358.1 CDS CFSAN001992_18200 NC_020307.1 3767785 3768492 R COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters; ABC transporter permease complement(3767785..3768492) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473359.1 CDS CFSAN001992_18205 NC_020307.1 3768493 3769071 R signal transduction histidine kinase, LytS complement(3768493..3769071) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473360.1 CDS CFSAN001992_18210 NC_020307.1 3769097 3769522 R COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif; hypothetical protein complement(3769097..3769522) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473361.1 CDS CFSAN001992_18215 NC_020307.1 3769896 3770942 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; erythrose 4-phosphate dehydrogenase 3769896..3770942 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473362.1 CDS pgk NC_020307.1 3770964 3772127 D COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase 3770964..3772127 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473363.1 CDS CFSAN001992_18225 NC_020307.1 3772229 3773308 D COG0191 Fructose/tagatose bisphosphate aldolase; fructose-bisphosphate aldolase 3772229..3773308 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473364.1 CDS CFSAN001992_18230 NC_020307.1 3773531 3774391 D COG0668 Small-conductance mechanosensitive channel; mechanosensitive channel MscS 3773531..3774391 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473365.1 CDS CFSAN001992_18235 NC_020307.1 3774592 3775227 D COG1279 Lysine efflux permease; arginine exporter protein 3774592..3775227 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473366.1 CDS CFSAN001992_18240 NC_020307.1 3775321 3776067 D COG2968 Uncharacterized conserved protein; oxidative stress defense protein 3775321..3776067 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473367.1 CDS CFSAN001992_18245 NC_020307.1 3776235 3777128 R COG0583 Transcriptional regulator; chromosome replication initiation inhibitor protein complement(3776235..3777128) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473368.1 CDS CFSAN001992_18250 NC_020307.1 3777282 3777941 D COG0120 Ribose 5-phosphate isomerase; ribose-5-phosphate isomerase A 3777282..3777941 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473369.1 CDS CFSAN001992_18255 NC_020307.1 3778208 3779440 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-3-phosphoglycerate dehydrogenase 3778208..3779440 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473370.1 CDS CFSAN001992_18260 NC_020307.1 3779821 3780369 R COG0212 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase family protein complement(3779821..3780369) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473371.1 CDS CFSAN001992_18265 NC_020307.1 3780663 3780992 R COG3027 Uncharacterized protein conserved in bacteria; Z-ring-associated protein complement(3780663..3780992) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473372.1 CDS CFSAN001992_18270 NC_020307.1 3781159 3781737 D COG3079 Uncharacterized protein conserved in bacteria; hypothetical protein 3781159..3781737 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473373.1 CDS CFSAN001992_18275 NC_020307.1 3781763 3783079 D COG0006 Xaa-Pro aminopeptidase; proline aminopeptidase P II 3781763..3783079 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473374.1 CDS CFSAN001992_18280 NC_020307.1 3783076 3784254 D COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; 2-octaprenyl-6-methoxyphenyl hydroxylase 3783076..3784254 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473375.1 CDS CFSAN001992_18285 NC_020307.1 3784380 3785582 D COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases; oxidoreductase 3784380..3785582 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473376.1 CDS gcvT NC_020307.1 3786037 3787131 D COG0404 Glycine cleavage system T protein (aminomethyltransferase); glycine cleavage system aminomethyltransferase T 3786037..3787131 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473377.1 CDS CFSAN001992_18295 NC_020307.1 3787157 3787546 D COG0509 Glycine cleavage system H protein (lipoate-binding); glycine cleavage system protein H 3787157..3787546 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473378.1 CDS CFSAN001992_18300 NC_020307.1 3787709 3790582 D COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain; glycine dehydrogenase 3787709..3790582 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473379.1 CDS CFSAN001992_18305 NC_020307.1 3791038 3791931 D hypothetical protein 3791038..3791931 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473380.1 CDS CFSAN001992_18310 NC_020307.1 3791979 3793412 R COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; 6-phospho-beta-glucosidase BglA complement(3791979..3793412) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473381.1 CDS CFSAN001992_18315 NC_020307.1 3793570 3793881 D COG3097 Uncharacterized protein conserved in bacteria; hypothetical protein 3793570..3793881 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473382.1 CDS CFSAN001992_18320 NC_020307.1 3794045 3794704 D COG1272 Predicted membrane protein, hemolysin III homolog; hemolysin 3794045..3794704 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473383.1 CDS CFSAN001992_18325 NC_020307.1 3794829 3795809 R COG0354 Predicted aminomethyltransferase related to GcvT; global regulator complement(3794829..3795809) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473384.1 CDS CFSAN001992_18330 NC_020307.1 3795824 3796060 R COG0456 Acetyltransferases; hypothetical protein complement(3795824..3796060) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473385.1 CDS CFSAN001992_18335 NC_020307.1 3796059 3796325 D COG2938 Uncharacterized conserved protein; hypothetical protein 3796059..3796325 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473386.1 CDS CFSAN001992_18340 NC_020307.1 3796306 3796719 D hypothetical protein 3796306..3796719 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473387.1 CDS CFSAN001992_18345 NC_020307.1 3796772 3797293 R COG0716 Flavodoxins; flavodoxin FldB complement(3796772..3797293) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473388.1 CDS xerD NC_020307.1 3797406 3798302 D COG4974 Site-specific recombinase XerD; site-specific tyrosine recombinase XerD 3797406..3798302 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473389.1 CDS CFSAN001992_18355 NC_020307.1 3798326 3799039 D COG1651 Protein-disulfide isomerase; protein disulfide isomerase II DsbC 3798326..3799039 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473390.1 CDS CFSAN001992_18360 NC_020307.1 3799045 3800778 D COG0608 Single-stranded DNA-specific exonuclease; ssDNA exonuclease RecJ 3799045..3800778 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473391.1 CDS lysS NC_020307.1 3801991 3803508 D COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA ligase 3801991..3803508 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473392.1 CDS CFSAN001992_18380 NC_020307.1 3803584 3804129 R COG1443 Isopentenyldiphosphate isomerase; isopentenyl-diphosphate delta-isomerase complement(3803584..3804129) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473393.1 CDS CFSAN001992_18385 NC_020307.1 3804400 3805152 D COG0739 Membrane proteins related to metalloendopeptidases; lipoprotein 3804400..3805152 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473394.1 CDS CFSAN001992_18390 NC_020307.1 3805429 3806229 R hypothetical protein complement(3805429..3806229) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473395.1 CDS CFSAN001992_18395 NC_020307.1 3806248 3806361 R hypothetical protein complement(3806248..3806361) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473396.1 CDS CFSAN001992_18400 NC_020307.1 3806399 3806605 R TrbH complement(3806399..3806605) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473397.1 CDS CFSAN001992_18405 NC_020307.1 3806495 3806596 D COG1487 Predicted nucleic acid-binding protein, contains PIN domain; plasmid maintenance protein 3806495..3806596 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473398.1 CDS CFSAN001992_18410 NC_020307.1 3807400 3807936 D Attachment invasion locus protein Flags: Precursor 3807400..3807936 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473399.1 CDS CFSAN001992_18415 NC_020307.1 3807983 3808615 D hypothetical protein 3807983..3808615 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473400.1 CDS CFSAN001992_18420 NC_020307.1 3809334 3809915 D COG3539 P pilus assembly protein, pilin FimA; fimbrial protein StdA 3809334..3809915 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473401.1 CDS CFSAN001992_18425 NC_020307.1 3810035 3812524 D COG3188 P pilus assembly protein, porin PapC; fimbrial outer membrane usher protein StdB 3810035..3812524 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473402.1 CDS CFSAN001992_18430 NC_020307.1 3812565 3813308 D COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone protein StdC 3812565..3813308 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473403.1 CDS CFSAN001992_18435 NC_020307.1 3813305 3814387 D hypothetical protein 3813305..3814387 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473404.1 CDS CFSAN001992_18440 NC_020307.1 3814496 3815002 D hypothetical protein 3814496..3815002 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473405.1 CDS CFSAN001992_18445 NC_020307.1 3814989 3815747 D hypothetical protein 3814989..3815747 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473406.1 CDS CFSAN001992_18450 NC_020307.1 3815957 3816799 R COG2215 ABC-type uncharacterized transport system, permease component; nickel/cobalt efflux protein RcnA complement(3815957..3816799) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473407.1 CDS CFSAN001992_18455 NC_020307.1 3816921 3817193 D COG1937 Uncharacterized protein conserved in bacteria; transcriptional repressor RcnR to maintain nickel and cobalt homeostasis 3816921..3817193 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473408.1 CDS CFSAN001992_18460 NC_020307.1 3817224 3818453 R COG0814 Amino acid permeases; inner membrane transport protein YqeG complement(3817224..3818453) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473409.1 CDS CFSAN001992_18465 NC_020307.1 3818595 3819050 R COG4125 Predicted membrane protein; putative inner membrane protein complement(3818595..3819050) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473410.1 CDS CFSAN001992_18470 NC_020307.1 3819154 3820017 D COG0583 Transcriptional regulator; putative RuBisCO transcriptional regulator 3819154..3820017 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473411.1 CDS CFSAN001992_18475 NC_020307.1 3820140 3821318 D COG0183 Acetyl-CoA acetyltransferase; acyltransferase 3820140..3821318 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473412.1 CDS CFSAN001992_18480 NC_020307.1 3821748 3822584 D COG3717 5-keto 4-deoxyuronate isomerase; 5-keto-4-deoxyuronate isomerase 3821748..3822584 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473413.1 CDS CFSAN001992_18485 NC_020307.1 3822641 3823402 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 2-deoxy-D-gluconate 3-dehydrogenase 3822641..3823402 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473414.1 CDS CFSAN001992_18490 NC_020307.1 3823755 3825173 D COG0477 Permeases of the major facilitator superfamily; Galactose-proton symporter Galactose transporter 3823755..3825173 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473415.1 CDS CFSAN001992_18495 NC_020307.1 3825286 3825993 D COG1794 Aspartate racemase; racemase 3825286..3825993 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473416.1 CDS CFSAN001992_18500 NC_020307.1 3825965 3826900 R COG0583 Transcriptional regulator; DNA-binding transcriptional regulator LysR complement(3825965..3826900) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473417.1 CDS CFSAN001992_18505 NC_020307.1 3827018 3828280 D COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 3827018..3828280 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473418.1 CDS CFSAN001992_18510 NC_020307.1 3828290 3829309 R COG1609 Transcriptional regulators; HTH-type transcriptional regulator AscG complement(3828290..3829309) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473419.1 CDS CFSAN001992_18515 NC_020307.1 3829323 3830351 R COG1609 Transcriptional regulators; DNA-binding transcriptional regulator GalR complement(3829323..3830351) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473420.1 CDS CFSAN001992_18520 NC_020307.1 3830944 3833103 D COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 3830944..3833103 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473421.1 CDS CFSAN001992_18525 NC_020307.1 3833096 3834298 D COG0477 Permeases of the major facilitator superfamily; lysophospholipid transporter LplT 3833096..3834298 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473422.1 CDS tas NC_020307.1 3834385 3835425 R COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); aldo-keto reductase complement(3834385..3835425) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473423.1 CDS CFSAN001992_18535 NC_020307.1 3835616 3835834 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; putative lipoprotein ygdR Flags: Precursor complement(3835616..3835834) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473424.1 CDS CFSAN001992_18540 NC_020307.1 3836004 3836717 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein complement(3836004..3836717) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473425.1 CDS CFSAN001992_18545 NC_020307.1 3836899 3837594 R COG3066 DNA mismatch repair protein; DNA mismatch repair protein complement(3836899..3837594) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473426.1 CDS CFSAN001992_18550 NC_020307.1 3838277 3838807 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; RNA pyrophosphohydrolase 3838277..3838807 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473427.1 CDS CFSAN001992_18555 NC_020307.1 3838820 3841066 D COG3605 Signal transduction protein containing GAF and PtsI domains; phosphoenolpyruvate-protein phosphotransferase 3838820..3841066 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473428.1 CDS CFSAN001992_18560 NC_020307.1 3841282 3842157 D COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase 3841282..3842157 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473429.1 CDS thyA NC_020307.1 3842164 3842958 D COG0207 Thymidylate synthase; thymidylate synthase 3842164..3842958 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473430.1 CDS CFSAN001992_18570 NC_020307.1 3842951 3843133 R hypothetical protein complement(3842951..3843133) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473431.1 CDS CFSAN001992_18575 NC_020307.1 3843143 3843613 D hypothetical protein 3843143..3843613 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473432.1 CDS CFSAN001992_18580 NC_020307.1 3843604 3844167 D COG2165 Type II secretory pathway, pseudopilin PulG; hypothetical protein 3843604..3844167 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473433.1 CDS CFSAN001992_18585 NC_020307.1 3844164 3844571 D hypothetical protein 3844164..3844571 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473434.1 CDS CFSAN001992_18590 NC_020307.1 3844556 3844876 D hypothetical protein 3844556..3844876 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473435.1 CDS recC NC_020307.1 3844892 3848263 D COG1330 Exonuclease V gamma subunit; exonuclease V subunit gamma 3844892..3848263 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473436.1 CDS CFSAN001992_18600 NC_020307.1 3848441 3851329 D COG0612 Predicted Zn-dependent peptidases; protease 3848441..3851329 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473437.1 CDS recB NC_020307.1 3851322 3854867 D COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); exonuclease V subunit beta 3851322..3854867 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473438.1 CDS recD NC_020307.1 3854864 3856699 D COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member; exonuclease V subunit alpha 3854864..3856699 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473439.1 CDS CFSAN001992_18615 NC_020307.1 3856802 3858133 R COG0548 Acetylglutamate kinase; N-acetylglutamate synthase complement(3856802..3858133) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473440.1 CDS amiC NC_020307.1 3858366 3859619 D COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 3858366..3859619 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473441.1 CDS mltA NC_020307.1 3860118 3861215 D COG2821 Membrane-bound lytic murein transglycosylase; murein transglycosylase A 3860118..3861215 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473442.1 CDS CFSAN001992_18630 NC_020307.1 3861325 3862131 D COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; sulfur acceptor protein CsdL 3861325..3862131 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473443.1 CDS CFSAN001992_18635 NC_020307.1 3862183 3863097 R COG2962 Predicted permeases; hypothetical protein complement(3862183..3863097) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473444.1 CDS CFSAN001992_18640 NC_020307.1 3863370 3863813 R COG2166 SufE protein probably involved in Fe-S center assembly; CsdA-binding activator complement(3863370..3863813) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473445.1 CDS CFSAN001992_18645 NC_020307.1 3863813 3865018 R COG0520 Selenocysteine lyase; cysteine sulfinate desulfinase complement(3863813..3865018) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473446.1 CDS CFSAN001992_18650 NC_020307.1 3865211 3865438 D putative lipoprotein ygdI Flags: Precursor 3865211..3865438 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473447.1 CDS CFSAN001992_18655 NC_020307.1 3865785 3866702 D COG0583 Transcriptional regulator; DNA-binding transcriptional activator GcvA 3865785..3866702 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473448.1 CDS CFSAN001992_18660 NC_020307.1 3866721 3867116 D COG2363 Uncharacterized small membrane protein; hypothetical protein 3866721..3867116 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473449.1 CDS CFSAN001992_18665 NC_020307.1 3867109 3868209 D COG2933 Predicted SAM-dependent methyltransferase; 23S rRNA C2498 ribose 2'-O-ribose methyltransferase 3867109..3868209 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473450.1 CDS CFSAN001992_18670 NC_020307.1 3868268 3868978 R COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional activator FucR complement(3868268..3868978) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473451.1 CDS fucU NC_020307.1 3869036 3869458 R COG4154 Fucose dissimilation pathway protein FucU; L-fucose mutarotase complement(3869036..3869458) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473452.1 CDS CFSAN001992_18680 NC_020307.1 3869460 3870878 R COG1070 Sugar (pentulose and hexulose) kinases; L-fuculokinase complement(3869460..3870878) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473453.1 CDS fucI NC_020307.1 3870979 3872754 R COG2407 L-fucose isomerase and related proteins; L-fucose isomerase complement(3870979..3872754) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473454.1 CDS CFSAN001992_18690 NC_020307.1 3872786 3874102 R COG0738 Fucose permease; L-fucose transporter complement(3872786..3874102) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473455.1 CDS CFSAN001992_18695 NC_020307.1 3874658 3875305 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; L-fuculose phosphate aldolase 3874658..3875305 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473456.1 CDS CFSAN001992_18700 NC_020307.1 3875322 3876470 D COG1454 Alcohol dehydrogenase, class IV; L-1,2-propanediol oxidoreductase 3875322..3876470 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473457.1 CDS CFSAN001992_18705 NC_020307.1 3876562 3877317 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); flap endonuclease-like protein complement(3876562..3877317) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473458.1 CDS CFSAN001992_18710 NC_020307.1 3877487 3878854 R COG1760 L-serine deaminase; L-serine deaminase II complement(3877487..3878854) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473459.1 CDS CFSAN001992_18715 NC_020307.1 3878913 3880202 R COG0814 Amino acid permeases; serine transporter complement(3878913..3880202) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473460.1 CDS CFSAN001992_18720 NC_020307.1 3880767 3882131 R COG1611 Predicted Rossmann fold nucleotide-binding protein; UPF0717 protein ygdH complement(3880767..3882131) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473461.1 CDS queF NC_020307.1 3882245 3883093 R COG2904 Uncharacterized protein conserved in bacteria; 7-cyano-7-deazaguanine reductase complement(3882245..3883093) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473462.1 CDS CFSAN001992_18730 NC_020307.1 3883162 3883707 D SecY interacting protein Syd 3883162..3883707 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473463.1 CDS CFSAN001992_18735 NC_020307.1 3883954 3884163 D hypothetical protein 3883954..3884163 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473464.1 CDS CFSAN001992_18740 NC_020307.1 3884319 3884648 D COG3098 Uncharacterized protein conserved in bacteria; hypothetical protein 3884319..3884648 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473465.1 CDS CFSAN001992_18745 NC_020307.1 3884648 3885430 D COG0564 Pseudouridylate synthases, 23S RNA-specific; tRNA pseudouridine synthase C 3884648..3885430 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473466.1 CDS CFSAN001992_18750 NC_020307.1 3885449 3885898 D COG0716 Flavodoxins; flavodoxin 3885449..3885898 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473467.1 CDS CFSAN001992_18755 NC_020307.1 3886380 3887738 D COG0477 Permeases of the major facilitator superfamily; putative glucarate transporter D-glucarate permease 3886380..3887738 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473468.1 CDS gudD NC_020307.1 3887735 3889075 D COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; glucarate dehydratase 3887735..3889075 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473469.1 CDS gudD NC_020307.1 3889096 3890436 D COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; glucarate dehydratase 3889096..3890436 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473470.1 CDS CFSAN001992_18770 NC_020307.1 3890514 3891656 D COG1929 Glycerate kinase; glycerate kinase 2 3890514..3891656 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473471.1 CDS CFSAN001992_18775 NC_020307.1 3891700 3894456 R COG0642 Signal transduction histidine kinase; hybrid sensory histidine kinase BarA complement(3891700..3894456) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473472.1 CDS rumA NC_020307.1 3894514 3895809 D COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; 23S rRNA m(5)U1939 methyltransferase 3894514..3895809 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473473.1 CDS relA NC_020307.1 3895861 3898095 D COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; (p)ppGpp synthetase I/GTP pyrophosphokinase 3895861..3898095 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473474.1 CDS CFSAN001992_18790 NC_020307.1 3898249 3898536 D COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain; hypothetical protein 3898249..3898536 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473475.1 CDS CFSAN001992_18795 NC_020307.1 3898502 3898798 D COG3668 Plasmid stabilization system protein; RelE/ParE family plasmid stabilization system protein 3898502..3898798 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473476.1 CDS CFSAN001992_18800 NC_020307.1 3898808 3898960 R fimbrial protein SteA complement(3898808..3898960) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473477.1 CDS mazG NC_020307.1 3899568 3900368 D COG1694 Predicted pyrophosphatase; nucleoside triphosphate pyrophosphohydrolase 3899568..3900368 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473478.1 CDS pyrG NC_020307.1 3900596 3902233 D COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase 3900596..3902233 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473479.1 CDS eno NC_020307.1 3902316 3903614 D COG0148 Enolase; enolase 3902316..3903614 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473480.1 CDS CFSAN001992_18820 NC_020307.1 3903750 3904421 D COG0602 Organic radical activating enzymes; radical SAM domain-containing protein 3903750..3904421 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473481.1 CDS CFSAN001992_18825 NC_020307.1 3905760 3906557 D COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II; beta-lactamase domain-containing protein 3905760..3906557 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473482.1 CDS CFSAN001992_18830 NC_020307.1 3906647 3907009 R COG0720 6-pyruvoyl-tetrahydropterin synthase; putative 6-pyruvoyl tetrahydrobiopterin synthase complement(3906647..3907009) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473483.1 CDS cysJ NC_020307.1 3907445 3909244 D COG0369 Sulfite reductase, alpha subunit (flavoprotein); sulfite reductase subunit alpha 3907445..3909244 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473484.1 CDS CFSAN001992_18840 NC_020307.1 3909244 3910956 D COG0155 Sulfite reductase, beta subunit (hemoprotein); sulfite reductase subunit beta 3909244..3910956 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473485.1 CDS CFSAN001992_18845 NC_020307.1 3911032 3911766 D COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes; phosphoadenosine phosphosulfate reductase 3911032..3911766 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473486.1 CDS CFSAN001992_18850 NC_020307.1 3911854 3912807 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; pathogenicity island 1 effector protein SopD complement(3911854..3912807) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473487.1 CDS CFSAN001992_18855 NC_020307.1 3913363 3915231 D COG1203 Predicted helicases; helicase 3913363..3915231 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473488.1 CDS CFSAN001992_18860 NC_020307.1 3915664 3916710 R COG2234 Predicted aminopeptidases; alkaline phosphatase isozyme conversion aminopeptidase complement(3915664..3916710) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473489.1 CDS CFSAN001992_18865 NC_020307.1 3916961 3917869 D COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes; sulfate adenylyltransferase subunit 2 3916961..3917869 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473490.1 CDS cysN NC_020307.1 3917879 3919318 D COG2895 GTPases - Sulfate adenylate transferase subunit 1; sulfate adenylyltransferase subunit 1 3917879..3919318 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473491.1 CDS CFSAN001992_18875 NC_020307.1 3919305 3919910 D COG0529 Adenylylsulfate kinase and related kinases; adenylylsulfate kinase 3919305..3919910 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473492.1 CDS CFSAN001992_18880 NC_020307.1 3919961 3920284 D hypothetical protein 3919961..3920284 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473493.1 CDS ftsB NC_020307.1 3920475 3920786 D COG2919 Septum formation initiator; cell division protein FtsB 3920475..3920786 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473494.1 CDS ispD NC_020307.1 3920805 3921515 D COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3920805..3921515 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473495.1 CDS ispF NC_020307.1 3921515 3921994 D COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3921515..3921994 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473496.1 CDS truD NC_020307.1 3921991 3923040 D COG0585 Uncharacterized conserved protein; tRNA pseudouridine synthase D 3921991..3923040 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473497.1 CDS surE NC_020307.1 3923021 3923782 D COG0496 Predicted acid phosphatase; 5'(3')-nucleotidase/polyphosphatase 3923021..3923782 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473498.1 CDS pcm NC_020307.1 3923776 3924402 D COG2518 Protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 3923776..3924402 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473499.1 CDS nlpD NC_020307.1 3924578 3925711 D COG0739 Membrane proteins related to metalloendopeptidases; lipoprotein NlpD 3924578..3925711 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473500.1 CDS CFSAN001992_18920 NC_020307.1 3925774 3926766 D COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoS 3925774..3926766 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473501.1 CDS CFSAN001992_18925 NC_020307.1 3926811 3927047 R 4-hydroxybenzoate decarboxylase subunit D complement(3926811..3927047) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473502.1 CDS CFSAN001992_18930 NC_020307.1 3927058 3928485 R COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; hypothetical protein complement(3927058..3928485) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473503.1 CDS CFSAN001992_18935 NC_020307.1 3928485 3929078 R COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; putative flavoprotein complement(3928485..3929078) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473504.1 CDS CFSAN001992_18940 NC_020307.1 3929249 3929653 D COG1846 Transcriptional regulators; transcriptional regulator 3929249..3929653 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473505.1 CDS CFSAN001992_18945 NC_020307.1 3929672 3930436 R COG1349 Transcriptional regulators of sugar metabolism; DeoR family transcriptional regulator complement(3929672..3930436) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473506.1 CDS CFSAN001992_18950 NC_020307.1 3930633 3931556 D COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; D-beta-hydroxybutyrate dehydrogenase 3930633..3931556 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473507.1 CDS CFSAN001992_18955 NC_020307.1 3931550 3932812 D COG3395 Uncharacterized protein conserved in bacteria; hypothetical protein 3931550..3932812 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473508.1 CDS CFSAN001992_18960 NC_020307.1 3932809 3933447 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; aldolase 3932809..3933447 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473509.1 CDS CFSAN001992_18965 NC_020307.1 3933452 3934228 D COG3622 Hydroxypyruvate isomerase; hypothetical protein 3933452..3934228 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473510.1 CDS CFSAN001992_18970 NC_020307.1 3934268 3935218 D COG0451 Nucleoside-diphosphate-sugar epimerases; NAD dependent epimerase/dehydratase family protein 3934268..3935218 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473511.1 CDS CFSAN001992_18975 NC_020307.1 3935215 3936711 D COG2610 H+/gluconate symporter and related permeases; putative permease 3935215..3936711 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473512.1 CDS CFSAN001992_18980 NC_020307.1 3936753 3937664 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(3936753..3937664) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473513.1 CDS CFSAN001992_18985 NC_020307.1 3937773 3938981 D COG0477 Permeases of the major facilitator superfamily; major facilitator family transporter 3937773..3938981 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473514.1 CDS CFSAN001992_18990 NC_020307.1 3938978 3939358 D COG4460 Uncharacterized protein conserved in bacteria; cytoplasmic protein 3938978..3939358 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473515.1 CDS CFSAN001992_18995 NC_020307.1 3939414 3941981 R COG0249 Mismatch repair ATPase (MutS family); DNA mismatch repair protein MutS complement(3939414..3941981) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473516.1 CDS CFSAN001992_19000 NC_020307.1 3942679 3942786 D hypothetical protein 3942679..3942786 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473517.1 CDS CFSAN001992_19005 NC_020307.1 3942958 3943614 R COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases; serine/threonine-specific protein phosphatase 2 complement(3942958..3943614) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473518.1 CDS CFSAN001992_19010 NC_020307.1 3944092 3944268 D putative cytoplasmic protein 3944092..3944268 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473519.1 CDS CFSAN001992_19015 NC_020307.1 3944483 3944830 R PrpA and PrpB, metallophosphatase domain protein complement(3944483..3944830) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473520.1 CDS CFSAN001992_19020 NC_020307.1 3944815 3945264 R putative cytoplasmic protein complement(3944815..3945264) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473521.1 CDS CFSAN001992_19025 NC_020307.1 3945696 3946139 R invasion lipoprotein InvH complement(3945696..3946139) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473522.1 CDS CFSAN001992_19030 NC_020307.1 3946596 3947246 D COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional regulator InvF 3946596..3947246 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473523.1 CDS CFSAN001992_19035 NC_020307.1 3947243 3948931 D COG1450 Type II secretory pathway, component PulD; type III secretion system outer membrane pore InvG 3947243..3948931 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473524.1 CDS CFSAN001992_19040 NC_020307.1 3948928 3950046 D type III secretion system regulator InvE 3948928..3950046 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473525.1 CDS CFSAN001992_19045 NC_020307.1 3950071 3952128 D COG4789 Type III secretory pathway, component EscV; type III secretion system protein InvA 3950071..3952128 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473526.1 CDS CFSAN001992_19050 NC_020307.1 3952152 3952559 D type III secretion system chaperone SpaK 3952152..3952559 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473527.1 CDS CFSAN001992_19055 NC_020307.1 3952556 3953851 D COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; ATP synthase SpaL 3952556..3953851 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473528.1 CDS CFSAN001992_19060 NC_020307.1 3953829 3954272 D type III secretion system protein SpaM 3953829..3954272 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473529.1 CDS CFSAN001992_19065 NC_020307.1 3954272 3955282 D antigen presentation protein SpaN 3954272..3955282 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473530.1 CDS CFSAN001992_19070 NC_020307.1 3955282 3956193 D COG1886 Flagellar motor switch/type III secretory pathway protein; type III secretion system protein SpaO 3955282..3956193 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473531.1 CDS spaP NC_020307.1 3956183 3956857 D COG4790 Type III secretory pathway, component EscR; type III secretion system protein SpaP 3956183..3956857 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473532.1 CDS CFSAN001992_19080 NC_020307.1 3956883 3957143 D COG4794 Type III secretory pathway, component EscS; type III secretion system protein SpaQ 3956883..3957143 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473533.1 CDS CFSAN001992_19085 NC_020307.1 3957147 3957938 D COG4791 Type III secretory pathway, component EscT; type III secretion system protein SpaR 3957147..3957938 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473534.1 CDS CFSAN001992_19090 NC_020307.1 3957925 3958995 D COG1377 Flagellar biosynthesis pathway, component FlhB; type III secretion system protein SpaS 3957925..3958995 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473535.1 CDS CFSAN001992_19095 NC_020307.1 3959133 3959630 D COG0457 FOG: TPR repeat; chaperone protein SicA 3959133..3959630 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473536.1 CDS CFSAN001992_19100 NC_020307.1 3959633 3961414 D pathogenicity island 1 effector protein SipB 3959633..3961414 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473537.1 CDS CFSAN001992_19105 NC_020307.1 3961442 3962671 D pathogenicity island 1 effector protein SipC 3961442..3962671 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473538.1 CDS CFSAN001992_19110 NC_020307.1 3962742 3963764 D cell invasion protein SipD 3962742..3963764 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473539.1 CDS CFSAN001992_19115 NC_020307.1 3963783 3965840 D pathogenicity island 1 effector protein SipA 3963783..3965840 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473540.1 CDS CFSAN001992_19120 NC_020307.1 3965859 3966107 D COG0236 Acyl carrier protein; acyl carrier protein IacP 3965859..3966107 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473541.1 CDS CFSAN001992_19125 NC_020307.1 3966187 3966411 D hypothetical protein 3966187..3966411 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473542.1 CDS CFSAN001992_19130 NC_020307.1 3966438 3966830 D chaperone protein SicP 3966438..3966830 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473543.1 CDS CFSAN001992_19135 NC_020307.1 3966817 3968448 D COG2453 Predicted protein-tyrosine phosphatase; pathogenicity island 1 effector protein StpP 3966817..3968448 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473544.1 CDS CFSAN001992_19140 NC_020307.1 3968502 3968984 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); invasion protein IagB complement(3968502..3968984) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473545.1 CDS CFSAN001992_19145 NC_020307.1 3969002 3970663 R COG3710 DNA-binding winged-HTH domains; invasion protein regulator complement(3969002..3970663) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473546.1 CDS CFSAN001992_19150 NC_020307.1 3971753 3972682 R COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional regulator HilD complement(3971753..3972682) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473547.1 CDS CFSAN001992_19155 NC_020307.1 3972998 3974176 D type III secretion system needle complex protein PrgH 3972998..3974176 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473548.1 CDS CFSAN001992_19160 NC_020307.1 3974201 3974443 D COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; type III secretion system needle complex protein PrgI 3974201..3974443 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473549.1 CDS CFSAN001992_19165 NC_020307.1 3974462 3974767 D type III secretion system needle complex protein PrgJ 3974462..3974767 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473550.1 CDS CFSAN001992_19170 NC_020307.1 3974764 3975522 D COG4669 Type III secretory pathway, lipoprotein EscJ; type III secretion system lipoprotein PrgK 3974764..3975522 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473551.1 CDS CFSAN001992_19175 NC_020307.1 3975515 3976093 D invasion protein OrgA 3975515..3976093 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473552.1 CDS CFSAN001992_19180 NC_020307.1 3976050 3976730 D invasion protein OrgB 3976050..3976730 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473553.1 CDS CFSAN001992_19185 NC_020307.1 3976727 3977179 D type III secretion system effector protein OrgC 3976727..3977179 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473554.1 CDS CFSAN001992_19190 NC_020307.1 3977391 3977459 D hypothetical protein 3977391..3977459 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473555.1 CDS CFSAN001992_19195 NC_020307.1 3977524 3978411 D COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional regulator SirC 3977524..3978411 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473556.1 CDS CFSAN001992_19200 NC_020307.1 3978796 3979551 D COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional activator SprB 3978796..3979551 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473559.1 CDS CFSAN001992_19215 NC_020307.1 3980718 3981566 R COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; overlaps another CDS with the same product name; chelated iron transport system membrane protein YfeD complement(3980718..3981566) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473560.1 CDS CFSAN001992_19220 NC_020307.1 3981557 3982417 R COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; overlaps another CDS with the same product name; Chelated iron transport system membrane protein yfeD complement(3981557..3982417) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473561.1 CDS CFSAN001992_19225 NC_020307.1 3982414 3983235 R COG1121 ABC-type Mn/Zn transport systems, ATPase component; manganese/iron transporter ATP-binding protein complement(3982414..3983235) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473562.1 CDS CFSAN001992_19230 NC_020307.1 3983232 3984149 R COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; periplasmic chelated iron-binding protein YfeA complement(3983232..3984149) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473563.1 CDS CFSAN001992_19235 NC_020307.1 3984331 3984675 D hypothetical protein 3984331..3984675 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473564.1 CDS CFSAN001992_19240 NC_020307.1 3984737 3986815 R COG1132 ABC-type multidrug transport system, ATPase and permease components; formate hydrogenlyase transcriptional activator FhlA complement(3984737..3986815) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473565.1 CDS CFSAN001992_19245 NC_020307.1 3987034 3988044 R COG0309 Hydrogenase maturation factor; carbamoyl dehydratase HypE complement(3987034..3988044) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473566.1 CDS CFSAN001992_19250 NC_020307.1 3988041 3989162 R COG0409 Hydrogenase maturation factor; hydrogenase isoenzymes formation protein HypD complement(3988041..3989162) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473567.1 CDS CFSAN001992_19255 NC_020307.1 3989162 3989434 R COG0298 Hydrogenase maturation factor; hydrogenase assembly chaperone complement(3989162..3989434) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473568.1 CDS CFSAN001992_19260 NC_020307.1 3989425 3990297 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; hydrogenase nickel incorporation protein HypB complement(3989425..3990297) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473569.1 CDS hypA NC_020307.1 3990366 3990722 R COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein complement(3990366..3990722) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473570.1 CDS CFSAN001992_19270 NC_020307.1 3990932 3991393 D formate hydrogenlyase regulatory protein HycA 3990932..3991393 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473571.1 CDS CFSAN001992_19275 NC_020307.1 3991539 3992147 D COG1142 Fe-S-cluster-containing hydrogenase components 2; formate hydrogenlyase subunit B 3991539..3992147 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473572.1 CDS CFSAN001992_19280 NC_020307.1 3992147 3993973 D COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; formate hydrogenlyase subunit 3 3992147..3993973 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473573.1 CDS hycD NC_020307.1 3993976 3994899 D COG0650 Formate hydrogenlyase subunit 4; hydrogenase 3 membrane subunit 3993976..3994899 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473574.1 CDS hycE NC_020307.1 3994917 3996626 D COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; hydrogenase 3 large subunit 3994917..3996626 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473575.1 CDS CFSAN001992_19295 NC_020307.1 3996636 3997178 D COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); formate hydrogenlyase complex iron-sulfur subunit 3996636..3997178 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473576.1 CDS CFSAN001992_19300 NC_020307.1 3997178 3997945 D COG3260 Ni,Fe-hydrogenase III small subunit; NAD(P)H-quinone oxidoreductase subunit K 3997178..3997945 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473577.1 CDS CFSAN001992_19305 NC_020307.1 3997942 3998352 D formate hydrogenlyase maturation protein HycH 3997942..3998352 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473578.1 CDS hycI NC_020307.1 3998345 3998815 D COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase 3 maturation protease 3998345..3998815 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473579.1 CDS CFSAN001992_19315 NC_020307.1 3998842 3999651 D hypothetical protein 3998842..3999651 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473580.1 CDS CFSAN001992_19320 NC_020307.1 3999852 4000397 D COG1142 Fe-S-cluster-containing hydrogenase components 2; formate dehydrogenase-H ferredoxin subunit 3999852..4000397 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473581.1 CDS CFSAN001992_19325 NC_020307.1 4000543 4002783 D COG0068 Hydrogenase maturation factor; carbamoyl phosphate phosphatase HypF 4000543..4002783 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473582.1 CDS CFSAN001992_19330 NC_020307.1 4002880 4004013 R COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; NADH:flavorubredoxin oxidoreductase complement(4002880..4004013) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473583.1 CDS CFSAN001992_19335 NC_020307.1 4004010 4005449 R COG0426 Uncharacterized flavoproteins; anaerobic nitric oxide reductase flavorubredoxin complement(4004010..4005449) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473584.1 CDS CFSAN001992_19340 NC_020307.1 4005635 4007155 D COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains; anaerobic nitric oxide reductase transcription regulator 4005635..4007155 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473585.1 CDS gutQ NC_020307.1 4007152 4008117 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; D-arabinose 5-phosphate isomerase complement(4007152..4008117) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473586.1 CDS srlR NC_020307.1 4008110 4008883 R COG1349 Transcriptional regulators of sugar metabolism; DNA-binding transcriptional repressor SrlR complement(4008110..4008883) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473587.1 CDS CFSAN001992_19355 NC_020307.1 4009081 4009440 R COG4578 Glucitol operon activator; DNA-binding transcriptional activator GutM complement(4009081..4009440) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473588.1 CDS CFSAN001992_19360 NC_020307.1 4009517 4010296 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); sorbitol-6-phosphate dehydrogenase complement(4009517..4010296) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473589.1 CDS CFSAN001992_19365 NC_020307.1 4010308 4010670 R COG3731 Phosphotransferase system sorbitol-specific component IIA; PTS system glucitol/sorbitol-specific transporter subunit IIA complement(4010308..4010670) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473590.1 CDS srlE NC_020307.1 4010682 4011653 R COG3732 Phosphotransferase system sorbitol-specific component IIBC; PTS system glucitol/sorbitol-specific transporter subunit IIB complement(4010682..4011653) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473591.1 CDS srlA NC_020307.1 4011650 4012213 R COG3730 Phosphotransferase system sorbitol-specific component IIC; PTS system glucitol/sorbitol-specific transporter subunit IIC complement(4011650..4012213) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473592.1 CDS CFSAN001992_19380 NC_020307.1 4012466 4013545 D COG2951 Membrane-bound lytic murein transglycosylase B; murein hydrolase B 4012466..4013545 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473593.1 CDS CFSAN001992_19385 NC_020307.1 4013583 4013828 R hypothetical protein complement(4013583..4013828) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473594.1 CDS CFSAN001992_19390 NC_020307.1 4014024 4014521 D COG1546 Uncharacterized protein (competence- and mitomycin-induced); hypothetical protein 4014024..4014521 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473595.1 CDS recA NC_020307.1 4014606 4015667 D COG0468 RecA/RadA recombinase; recombinase A 4014606..4015667 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473596.1 CDS recX NC_020307.1 4015784 4016284 D COG2137 Uncharacterized protein conserved in bacteria; recombination regulator RecX 4015784..4016284 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473597.1 CDS alaS NC_020307.1 4016520 4019150 D COG0013 Alanyl-tRNA synthetase; alanyl-tRNA ligase 4016520..4019150 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473598.1 CDS CFSAN001992_19410 NC_020307.1 4019385 4019570 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator 4019385..4019570 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473599.1 CDS CFSAN001992_19415 NC_020307.1 4020977 4021543 D COG0637 Predicted phosphatase/phosphohexomutase; fructose-1-P/6-phosphogluconate phosphatase 4020977..4021543 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473600.1 CDS CFSAN001992_19420 NC_020307.1 4021540 4021965 D COG1238 Predicted membrane protein; Inner membrane protein yqaA 4021540..4021965 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473601.1 CDS CFSAN001992_19425 NC_020307.1 4022042 4023598 D COG2918 Gamma-glutamylcysteine synthetase; glutamate--cysteine ligase 4022042..4023598 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473602.1 CDS CFSAN001992_19430 NC_020307.1 4023748 4024263 D COG1854 LuxS protein involved in autoinducer AI2 synthesis; S-ribosylhomocysteinase 4023748..4024263 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473603.1 CDS CFSAN001992_19435 NC_020307.1 4024609 4025979 D COG1048 Aconitase A; glycoporin 4024609..4025979 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473604.1 CDS emrB NC_020307.1 4026028 4027563 R COG0477 Permeases of the major facilitator superfamily; multidrug resistance protein B complement(4026028..4027563) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473605.1 CDS CFSAN001992_19445 NC_020307.1 4027580 4028752 R COG1566 Multidrug resistance efflux pump; multidrug efflux system protein EmrA complement(4027580..4028752) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473606.1 CDS CFSAN001992_19450 NC_020307.1 4028879 4029409 R COG1846 Transcriptional regulators; transcriptional repressor MprA complement(4028879..4029409) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473607.1 CDS CFSAN001992_19455 NC_020307.1 4029906 4031090 R COG0477 Permeases of the major facilitator superfamily; major facilitator family transporter complement(4029906..4031090) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473608.1 CDS proX NC_020307.1 4031255 4032250 R COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components; glycine betaine transporter periplasmic subunit complement(4031255..4032250) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473609.1 CDS CFSAN001992_19465 NC_020307.1 4032320 4033384 R COG4176 ABC-type proline/glycine betaine transport system, permease component; glycine betaine transporter membrane protein complement(4032320..4033384) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473610.1 CDS CFSAN001992_19470 NC_020307.1 4033377 4034579 R COG4175 ABC-type proline/glycine betaine transport system, ATPase component; glycine betaine transporter ATP-binding subunit complement(4033377..4034579) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473611.1 CDS nrdF NC_020307.1 4034934 4035893 R COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta complement(4034934..4035893) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473612.1 CDS CFSAN001992_19480 NC_020307.1 4035904 4037985 R COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha complement(4035904..4037985) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473613.1 CDS nrdI NC_020307.1 4038021 4038431 R COG1780 Protein involved in ribonucleotide reduction; ribonucleotide reductase stimulatory protein complement(4038021..4038431) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473614.1 CDS CFSAN001992_19490 NC_020307.1 4038428 4038673 R COG0695 Glutaredoxin and related proteins; glutaredoxin-like protein complement(4038428..4038673) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473615.1 CDS CFSAN001992_19495 NC_020307.1 4038945 4039376 R COG2128 Uncharacterized conserved protein; alkylhydroperoxidase complement(4038945..4039376) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473616.1 CDS CFSAN001992_19500 NC_020307.1 4039465 4040799 D COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; transcriptional regulator, GntR family with aminotransferase domain 4039465..4040799 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473617.1 CDS CFSAN001992_19505 NC_020307.1 4040883 4041209 R COG4575 Uncharacterized conserved protein; hypothetical protein complement(4040883..4041209) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473618.1 CDS CFSAN001992_19510 NC_020307.1 4041371 4041661 D hypothetical protein 4041371..4041661 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473619.1 CDS CFSAN001992_19515 NC_020307.1 4041757 4042206 R hypothetical protein complement(4041757..4042206) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473620.1 CDS CFSAN001992_19520 NC_020307.1 4043106 4043507 D COG2916 DNA-binding protein H-NS; DNA binding protein, nucleoid-associated 4043106..4043507 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473621.1 CDS CFSAN001992_19525 NC_020307.1 4043597 4043776 R hypothetical protein complement(4043597..4043776) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473622.1 CDS CFSAN001992_19530 NC_020307.1 4043855 4044382 R COG0607 Rhodanese-related sulfurtransferase; Rhodanese-like sulfurtransferase complement(4043855..4044382) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473623.1 CDS CFSAN001992_19535 NC_020307.1 4044392 4044691 R COG0640 Predicted transcriptional regulators; regulatory protein ArsR complement(4044392..4044691) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473624.1 CDS CFSAN001992_19540 NC_020307.1 4044874 4045032 D COG0401 Uncharacterized homolog of Blt101; hypothetical protein 4044874..4045032 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473625.1 CDS CFSAN001992_19545 NC_020307.1 4045132 4045581 D COG1652 Uncharacterized protein containing LysM domain; LysM domain/BON superfamily protein 4045132..4045581 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473626.1 CDS CFSAN001992_19550 NC_020307.1 4045603 4046280 R COG1802 Transcriptional regulators; DNA-binding transcriptional regulator CsiR complement(4045603..4046280) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473627.1 CDS CFSAN001992_19555 NC_020307.1 4046322 4047722 R COG1113 Gamma-aminobutyrate permease and related permeases; gamma-aminobutyrate transporter complement(4046322..4047722) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473628.1 CDS CFSAN001992_19560 NC_020307.1 4047853 4049136 R COG0160 4-aminobutyrate aminotransferase and related aminotransferases; 4-aminobutyrate aminotransferase complement(4047853..4049136) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473629.1 CDS gabD NC_020307.1 4049151 4050599 R COG1012 NAD-dependent aldehyde dehydrogenases; succinate-semialdehyde dehydrogenase I complement(4049151..4050599) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473630.1 CDS CFSAN001992_19570 NC_020307.1 4050621 4051889 R COG0579 Predicted dehydrogenase; hydroxyglutarate oxidase complement(4050621..4051889) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473631.1 CDS CFSAN001992_19575 NC_020307.1 4051915 4052892 R carbon starvation induced protein complement(4051915..4052892) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473632.1 CDS CFSAN001992_19580 NC_020307.1 4053195 4054709 R COG3333 Uncharacterized protein conserved in bacteria; putative 52.8 kDa protein in TAR-I ttuC' 3'region ORFZ2 complement(4053195..4054709) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473633.1 CDS CFSAN001992_19585 NC_020307.1 4054720 4055151 R hypothetical protein complement(4054720..4055151) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473634.1 CDS CFSAN001992_19590 NC_020307.1 4055166 4056143 R COG3181 Uncharacterized protein conserved in bacteria; UPF0065 protein yflP Flags: Precursor complement(4055166..4056143) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473635.1 CDS CFSAN001992_19595 NC_020307.1 4056298 4056972 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulatory protein TctD 4056298..4056972 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473636.1 CDS CFSAN001992_19610 NC_020307.1 4058506 4059519 D COG3376 High-affinity nickel permease; high-affinity nickel transport protein 4058506..4059519 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473637.1 CDS CFSAN001992_19615 NC_020307.1 4059612 4059725 R hypothetical protein complement(4059612..4059725) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473638.1 CDS CFSAN001992_19620 NC_020307.1 4060241 4061137 R antimicrobial resistance protein Mig-14 complement(4060241..4061137) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473639.1 CDS CFSAN001992_19625 NC_020307.1 4061431 4062360 R COG2990 Uncharacterized protein conserved in bacteria; virulence protein complement(4061431..4062360) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473640.1 CDS CFSAN001992_19630 NC_020307.1 4062878 4063930 D COG1357 Uncharacterized low-complexity proteins; secreted effector protein PipB2 4062878..4063930 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473641.1 CDS CFSAN001992_19635 NC_020307.1 4064105 4064443 D COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); inner membrane protein 4064105..4064443 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473642.1 CDS CFSAN001992_19640 NC_020307.1 4065073 4065603 D COG4771 Outer membrane receptor for ferrienterochelin and colicins; outer membrane receptor FepA 4065073..4065603 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473643.1 CDS CFSAN001992_19655 NC_020307.1 4067187 4068122 R COG2819 Predicted hydrolase of the alpha/beta superfamily; IroE complement(4067187..4068122) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473644.1 CDS CFSAN001992_19660 NC_020307.1 4068154 4069398 R COG2382 Enterochelin esterase and related enzymes; enterochelin esterase complement(4068154..4069398) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473645.1 CDS CFSAN001992_19665 NC_020307.1 4069508 4073164 R COG1132 ABC-type multidrug transport system, ATPase and permease components; ATP binding protein complement(4069508..4073164) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473646.1 CDS CFSAN001992_19670 NC_020307.1 4073245 4074360 R COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase; putative glycosyl transferase complement(4073245..4074360) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473647.1 CDS CFSAN001992_19675 NC_020307.1 4075323 4075895 R COG1961 Site-specific recombinases, DNA invertase Pin homologs; DNA-invertase hin complement(4075323..4075895) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473648.1 CDS CFSAN001992_19680 NC_020307.1 4075987 4077507 D COG1344 Flagellin and related hook-associated proteins; flagellin 4075987..4077507 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473649.1 CDS CFSAN001992_19685 NC_020307.1 4077575 4078114 D flagellar synthesis: repressor of fliC 4077575..4078114 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473650.1 CDS CFSAN001992_19690 NC_020307.1 4078941 4081274 R COG4643 Uncharacterized protein conserved in bacteria; bacteriophage P4 DNA primase complement(4078941..4081274) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473651.1 CDS CFSAN001992_19695 NC_020307.1 4081289 4081609 R hypothetical protein complement(4081289..4081609) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473652.1 CDS CFSAN001992_19700 NC_020307.1 4081606 4081833 R hypothetical protein complement(4081606..4081833) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473653.1 CDS CFSAN001992_19705 NC_020307.1 4081830 4082387 R CI repressor complement(4081830..4082387) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473654.1 CDS CFSAN001992_19710 NC_020307.1 4082384 4082650 R COG3311 Predicted transcriptional regulator; phage DNA binding protein complement(4082384..4082650) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473655.1 CDS CFSAN001992_19715 NC_020307.1 4083190 4083927 D glycoprotein 3-like protein 4083190..4083927 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473656.1 CDS CFSAN001992_19720 NC_020307.1 4083924 4084169 D hypothetical protein 4083924..4084169 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473657.1 CDS CFSAN001992_19725 NC_020307.1 4084186 4084752 D phage polarity suppression protein 4084186..4084752 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473658.1 CDS CFSAN001992_19730 NC_020307.1 4084959 4086728 R COG0433 Predicted ATPase; hypothetical protein complement(4084959..4086728) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473659.1 CDS CFSAN001992_19735 NC_020307.1 4086716 4087831 R hypothetical protein complement(4086716..4087831) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473660.1 CDS CFSAN001992_19740 NC_020307.1 4087842 4089035 R COG0582 Integrase; phage integrase family protein complement(4087842..4089035) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473661.1 CDS CFSAN001992_19745 NC_020307.1 4089378 4090589 R hypothetical protein complement(4089378..4090589) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473662.1 CDS CFSAN001992_19750 NC_020307.1 4090586 4091611 R COG0582 Integrase; bacteriophage integrase complement(4090586..4091611) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473663.1 CDS CFSAN001992_19755 NC_020307.1 4091613 4092245 R COG2932 Predicted transcriptional regulator; phage repressor protein cI complement(4091613..4092245) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473664.1 CDS CFSAN001992_19760 NC_020307.1 4092365 4092613 D bacteriophage regulatory protein 4092365..4092613 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473665.1 CDS CFSAN001992_19765 NC_020307.1 4092646 4093155 D bacteriophage regulatory protein 4092646..4093155 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473666.1 CDS CFSAN001992_19770 NC_020307.1 4093650 4093796 D bacteriophage protein 4093650..4093796 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473667.1 CDS CFSAN001992_19775 NC_020307.1 4093760 4094101 D bacteriophage protein 4093760..4094101 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473668.1 CDS CFSAN001992_19780 NC_020307.1 4094169 4094396 D bacteriophage protein 4094169..4094396 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473669.1 CDS CFSAN001992_19785 NC_020307.1 4094396 4094623 D COG1734 DnaK suppressor protein; bacteriophage protein 4094396..4094623 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473670.1 CDS CFSAN001992_19790 NC_020307.1 4094620 4095477 D COG0338 Site-specific DNA methylase; DNA adenine methylase 4094620..4095477 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473671.1 CDS CFSAN001992_19795 NC_020307.1 4095468 4097879 D COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; bacteriophage replication protein A 4095468..4097879 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473672.1 CDS CFSAN001992_19800 NC_020307.1 4098035 4098223 D hypothetical protein 4098035..4098223 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473673.1 CDS CFSAN001992_19805 NC_020307.1 4098235 4098471 D dinI-like protein in retron EC67 4098235..4098471 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473674.1 CDS CFSAN001992_19810 NC_020307.1 4098588 4099265 D hypothetical protein 4098588..4099265 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473675.1 CDS CFSAN001992_19815 NC_020307.1 4099607 4100713 D hypothetical protein 4099607..4100713 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473676.1 CDS CFSAN001992_19820 NC_020307.1 4100741 4101160 D hypothetical protein 4100741..4101160 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473677.1 CDS CFSAN001992_19825 NC_020307.1 4101160 4101825 D hypothetical protein 4101160..4101825 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473678.1 CDS CFSAN001992_19830 NC_020307.1 4101895 4102929 R COG5518 Bacteriophage capsid portal protein; phage portal protein, pbsx family complement(4101895..4102929) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473679.1 CDS CFSAN001992_19835 NC_020307.1 4102929 4104695 R Terminase, ATPase subunit complement(4102929..4104695) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473680.1 CDS CFSAN001992_19840 NC_020307.1 4104838 4105671 D Presumed capsid scaffolding protein (GpO) 4104838..4105671 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473681.1 CDS CFSAN001992_19845 NC_020307.1 4105688 4106770 D major capsid-like protein 4105688..4106770 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473682.1 CDS CFSAN001992_19850 NC_020307.1 4106774 4107427 D terminase, endonuclease subunit 4106774..4107427 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473683.1 CDS CFSAN001992_19855 NC_020307.1 4107523 4107987 D hypothetical protein 4107523..4107987 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473684.1 CDS CFSAN001992_19860 NC_020307.1 4107987 4108190 D COG5004 P2-like prophage tail protein X; phage tail protein 4107987..4108190 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473685.1 CDS CFSAN001992_19865 NC_020307.1 4108194 4108409 D secretion protein 4108194..4108409 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473686.1 CDS CFSAN001992_19870 NC_020307.1 4108390 4108899 D COG3772 Phage-related lysozyme (muraminidase); phage lysozyme 4108390..4108899 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473687.1 CDS CFSAN001992_19875 NC_020307.1 4108904 4109299 D hypothetical protein 4108904..4109299 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473688.1 CDS CFSAN001992_19880 NC_020307.1 4109281 4109706 D regulatory protein 4109281..4109706 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473689.1 CDS CFSAN001992_19885 NC_020307.1 4109723 4109839 D Fels-2 prophage protein 4109723..4109839 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473690.1 CDS CFSAN001992_19890 NC_020307.1 4109802 4110233 D putative phage tail protein 4109802..4110233 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473691.1 CDS CFSAN001992_19895 NC_020307.1 4110226 4110672 D phage virion morphogenesis protein 4110226..4110672 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473692.1 CDS CFSAN001992_19900 NC_020307.1 4110741 4111319 D COG4540 Phage P2 baseplate assembly protein gpV; phage baseplate assembly protein V 4110741..4111319 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473693.1 CDS CFSAN001992_19905 NC_020307.1 4111316 4111675 D COG3628 Phage baseplate assembly protein W; base plate tail-like protein 4111316..4111675 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473694.1 CDS CFSAN001992_19910 NC_020307.1 4111662 4112570 D COG3948 Phage-related baseplate assembly protein; phage tail-like protein 4111662..4112570 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473695.1 CDS CFSAN001992_19915 NC_020307.1 4112563 4113168 D COG4385 Bacteriophage P2-related tail formation protein; putative phage tail protein 4112563..4113168 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473696.1 CDS CFSAN001992_19920 NC_020307.1 4113165 4114970 D COG5301 Phage-related tail fibre protein; Gifsy-2 prophage tail fiber protein 4113165..4114970 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473697.1 CDS CFSAN001992_19925 NC_020307.1 4114970 4115545 D Tail fiber assembly protein 4114970..4115545 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473698.1 CDS CFSAN001992_19930 NC_020307.1 4116143 4116376 R phage tail-fiber asembly protein complement(4116143..4116376) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473699.1 CDS CFSAN001992_19935 NC_020307.1 4116425 4116649 D COG1961 Site-specific recombinases, DNA invertase Pin homologs; DNA invertase-like protein 4116425..4116649 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473700.1 CDS CFSAN001992_19940 NC_020307.1 4116752 4117924 D COG3497 Phage tail sheath protein FI; major tail sheath protein 4116752..4117924 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473701.1 CDS CFSAN001992_19945 NC_020307.1 4117934 4118449 D COG3498 Phage tail tube protein FII; major tail tube protein 4117934..4118449 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473702.1 CDS CFSAN001992_19950 NC_020307.1 4118504 4118806 D phage tail protein E 4118504..4118806 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473703.1 CDS CFSAN001992_19955 NC_020307.1 4118821 4118940 D gpE-like protein 4118821..4118940 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473704.1 CDS CFSAN001992_19960 NC_020307.1 4118933 4121740 D COG5283 Phage-related tail protein; phage tail tape measure protein 4118933..4121740 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473705.1 CDS CFSAN001992_19965 NC_020307.1 4121737 4122222 D COG3499 Phage protein U; phage P2 GpU family protein 4121737..4122222 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473706.1 CDS CFSAN001992_19970 NC_020307.1 4122219 4123319 D COG3500 Phage protein D; phage late control D family protein 4122219..4123319 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473707.1 CDS CFSAN001992_19975 NC_020307.1 4123353 4123604 D positive regulator of late gene transcription 4123353..4123604 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473708.1 CDS CFSAN001992_19980 NC_020307.1 4123889 4124479 D antirepressor-like protein 4123889..4124479 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473709.1 CDS CFSAN001992_19985 NC_020307.1 4124984 4126174 R COG0845 Membrane-fusion protein; type I secretion membrane fusion protein, HlyD family protein complement(4124984..4126174) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473710.1 CDS CFSAN001992_19990 NC_020307.1 4126155 4128335 R COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain; type I secretion protein, ATP-binding protein complement(4126155..4128335) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473711.1 CDS CFSAN001992_19995 NC_020307.1 4128332 4129741 R COG1538 Outer membrane protein; Outer membrane efflux protein complement(4128332..4129741) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473712.1 CDS CFSAN001992_20000 NC_020307.1 4129806 4141280 R large repetitive protein complement(4129806..4141280) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473713.1 CDS smpB NC_020307.1 4141896 4142378 R COG0691 tmRNA-binding protein; SsrA-binding protein complement(4141896..4142378) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473714.1 CDS CFSAN001992_20010 NC_020307.1 4142567 4143004 D COG2867 Oligoketide cyclase/lipid transport protein; hypothetical protein 4142567..4143004 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473715.1 CDS CFSAN001992_20015 NC_020307.1 4142994 4143284 D COG2914 Uncharacterized protein conserved in bacteria; hypothetical protein 4142994..4143284 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473716.1 CDS CFSAN001992_20020 NC_020307.1 4143449 4143787 R COG2913 Small protein A (tmRNA-binding); outer membrane biogenesis protein BamE complement(4143449..4143787) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473717.1 CDS CFSAN001992_20025 NC_020307.1 4143936 4145597 R COG0497 ATPase involved in DNA repair; recombination and repair protein complement(4143936..4145597) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473718.1 CDS ppnK NC_020307.1 4145683 4146561 R COG0061 Predicted sugar kinase; inorganic polyphosphate/ATP-NAD kinase complement(4145683..4146561) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473719.1 CDS CFSAN001992_20035 NC_020307.1 4146684 4147274 D COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein GrpE 4146684..4147274 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473720.1 CDS CFSAN001992_20040 NC_020307.1 4147309 4147914 R hypothetical protein complement(4147309..4147914) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473721.1 CDS CFSAN001992_20045 NC_020307.1 4148044 4149240 R COG4536 Putative Mg2+ and Co2+ transporter CorB; hypothetical protein complement(4148044..4149240) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473722.1 CDS CFSAN001992_20050 NC_020307.1 4149350 4150141 R COG4137 ABC-type uncharacterized transport system, permease component; Cytochrome c biogenesis protein ccsA complement(4149350..4150141) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473723.1 CDS CFSAN001992_20055 NC_020307.1 4150307 4151668 D COG0541 Signal recognition particle GTPase; signal recognition particle protein 4150307..4151668 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473724.1 CDS rpsP NC_020307.1 4151921 4152169 D COG0228 Ribosomal protein S16; 30S ribosomal protein S16 4151921..4152169 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473725.1 CDS rimM NC_020307.1 4152188 4152736 D COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM 4152188..4152736 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473726.1 CDS trmD NC_020307.1 4152781 4153548 D COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 4152781..4153548 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473727.1 CDS rplS NC_020307.1 4153589 4153936 D COG0335 Ribosomal protein L19; 50S ribosomal protein L19 4153589..4153936 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473728.1 CDS CFSAN001992_20080 NC_020307.1 4154081 4154299 R Late control protein GpB complement(4154081..4154299) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473729.1 CDS CFSAN001992_20085 NC_020307.1 4154375 4155430 R COG3500 Phage protein D; phage late control protein D complement(4154375..4155430) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473730.1 CDS CFSAN001992_20090 NC_020307.1 4155442 4155543 R phage late control protein D complement(4155442..4155543) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473731.1 CDS CFSAN001992_20095 NC_020307.1 4155540 4156025 R COG3499 Phage protein U; gp25 phage protein complement(4155540..4156025) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473732.1 CDS CFSAN001992_20100 NC_020307.1 4156039 4158480 R COG5283 Phage-related tail protein; gp24 complement(4156039..4158480) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473733.1 CDS CFSAN001992_20105 NC_020307.1 4158473 4158592 R hypothetical protein complement(4158473..4158592) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473734.1 CDS CFSAN001992_20110 NC_020307.1 4158625 4158960 R phage tail protein complement(4158625..4158960) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473735.1 CDS CFSAN001992_20115 NC_020307.1 4159023 4159541 R COG3498 Phage tail tube protein FII; Major tail tube protein FII complement(4159023..4159541) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473736.1 CDS CFSAN001992_20120 NC_020307.1 4159557 4160744 R COG3497 Phage tail sheath protein FI; phage tail sheath protein complement(4159557..4160744) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473737.1 CDS CFSAN001992_20125 NC_020307.1 4160879 4161280 R Fels-2 prophage Tfa complement(4160879..4161280) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473738.1 CDS CFSAN001992_20130 NC_020307.1 4161287 4162927 R COG5301 Phage-related tail fibre protein; bacteriophage tail fiber protein complement(4161287..4162927) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473739.1 CDS CFSAN001992_20135 NC_020307.1 4162934 4163467 R COG4385 Bacteriophage P2-related tail formation protein; phage Tail protein I complement(4162934..4163467) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473740.1 CDS CFSAN001992_20140 NC_020307.1 4163460 4164368 R COG3948 Phage-related baseplate assembly protein; baseplate assembly protein complement(4163460..4164368) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473741.1 CDS CFSAN001992_20145 NC_020307.1 4164375 4164722 R COG3628 Phage baseplate assembly protein W; Baseplate assembly protein W GpW complement(4164375..4164722) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473742.1 CDS CFSAN001992_20150 NC_020307.1 4164719 4165360 R COG4540 Phage P2 baseplate assembly protein gpV; phage tail protein complement(4164719..4165360) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473743.1 CDS CFSAN001992_20155 NC_020307.1 4165429 4165878 R Tail completion protein S GpS complement(4165429..4165878) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473744.1 CDS CFSAN001992_20160 NC_020307.1 4165871 4166338 R putative phage tail completion protein complement(4165871..4166338) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473745.1 CDS CFSAN001992_20165 NC_020307.1 4166301 4166459 R overlaps another CDS with the same product name; lysozyme complement(4166301..4166459) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473746.1 CDS CFSAN001992_20170 NC_020307.1 4166446 4166859 R overlaps another CDS with the same product name; lysozyme complement(4166446..4166859) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473747.1 CDS CFSAN001992_20175 NC_020307.1 4166856 4167353 R COG4678 Muramidase (phage lambda lysozyme); endolysin complement(4166856..4167353) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473748.1 CDS CFSAN001992_20180 NC_020307.1 4167340 4167636 R Holin complement(4167340..4167636) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473749.1 CDS CFSAN001992_20185 NC_020307.1 4167640 4167828 R COG5004 P2-like prophage tail protein X; Tail protein X GpX complement(4167640..4167828) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473750.1 CDS CFSAN001992_20190 NC_020307.1 4167843 4168349 R Head completion/stabilization protein GpL complement(4167843..4168349) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473751.1 CDS CFSAN001992_20195 NC_020307.1 4168443 4169192 R terminase, endonuclease subunit complement(4168443..4169192) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473752.1 CDS CFSAN001992_20200 NC_020307.1 4169196 4170263 R putative major capsid protein complement(4169196..4170263) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473753.1 CDS CFSAN001992_20205 NC_020307.1 4170340 4171194 R putative capsid scaffolding protein complement(4170340..4171194) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473754.1 CDS CFSAN001992_20210 NC_020307.1 4171360 4173132 D COG5484 Uncharacterized conserved protein; terminase, ATPase subunit 4171360..4173132 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473755.1 CDS CFSAN001992_20215 NC_020307.1 4173129 4173875 D hypothetical protein 4173129..4173875 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473756.1 CDS CFSAN001992_20220 NC_020307.1 4173872 4174894 D COG5518 Bacteriophage capsid portal protein; capsid portal protein 4173872..4174894 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473757.1 CDS CFSAN001992_20225 NC_020307.1 4175029 4175211 R hypothetical protein complement(4175029..4175211) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473758.1 CDS CFSAN001992_20230 NC_020307.1 4175328 4176269 D COG0481 Membrane GTPase LepA; phage protein 4175328..4176269 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473759.1 CDS CFSAN001992_20235 NC_020307.1 4176343 4176552 R COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); hypothetical protein complement(4176343..4176552) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473760.1 CDS CFSAN001992_20240 NC_020307.1 4176748 4176981 R DinI-like protein in retron EC67 complement(4176748..4176981) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473761.1 CDS CFSAN001992_20245 NC_020307.1 4176985 4177167 R hypothetical protein complement(4176985..4177167) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473762.1 CDS CFSAN001992_20250 NC_020307.1 4177285 4179510 R Replication protein GpA complement(4177285..4179510) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473763.1 CDS CFSAN001992_20255 NC_020307.1 4179501 4179782 R phage protein complement(4179501..4179782) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473764.1 CDS CFSAN001992_20260 NC_020307.1 4179779 4180051 R phage protein complement(4179779..4180051) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473765.1 CDS CFSAN001992_20265 NC_020307.1 4180048 4180632 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; exonuclease complement(4180048..4180632) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473766.1 CDS CFSAN001992_20270 NC_020307.1 4180629 4180856 R COG1734 DnaK suppressor protein; phage protein complement(4180629..4180856) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473767.1 CDS CFSAN001992_20275 NC_020307.1 4180856 4181083 R putative 8.8 kDa protein in GpA 5'region complement(4180856..4181083) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473768.1 CDS CFSAN001992_20280 NC_020307.1 4181153 4181353 R COG1890 Ribosomal protein S3AE; hypothetical protein complement(4181153..4181353) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473769.1 CDS CFSAN001992_20285 NC_020307.1 4181340 4181567 R hypothetical protein complement(4181340..4181567) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473770.1 CDS CFSAN001992_20290 NC_020307.1 4181575 4182084 R phage regulatory protein complement(4181575..4182084) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473771.1 CDS CFSAN001992_20295 NC_020307.1 4182117 4182488 R hypothetical protein complement(4182117..4182488) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473772.1 CDS CFSAN001992_20300 NC_020307.1 4182602 4183447 D COG2932 Predicted transcriptional regulator; repressor protein 4182602..4183447 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473773.1 CDS CFSAN001992_20305 NC_020307.1 4183456 4183794 D hypothetical protein 4183456..4183794 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473774.1 CDS CFSAN001992_20310 NC_020307.1 4183819 4184868 D COG0582 Integrase; bacteriophage integrase 4183819..4184868 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473775.1 CDS CFSAN001992_20315 NC_020307.1 4185120 4186340 R COG2199 FOG: GGDEF domain; inner membrane diguanylate cyclase complement(4185120..4186340) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473776.1 CDS CFSAN001992_20320 NC_020307.1 4186333 4186851 R periplasmic protein complement(4186333..4186851) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473777.1 CDS CFSAN001992_20325 NC_020307.1 4187291 4188361 D COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 4187291..4188361 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473778.1 CDS tyrA NC_020307.1 4188371 4189492 D COG1605 Chorismate mutase; bifunctional chorismate mutase/prephenate dehydrogenase 4188371..4189492 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473779.1 CDS CFSAN001992_20335 NC_020307.1 4189550 4190458 D COG3386 Gluconolactonase; SMP-30/Gluconolaconase/LRE domain-containing protein 4189550..4190458 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473780.1 CDS pheA NC_020307.1 4190419 4191579 R COG1605 Chorismate mutase; bifunctional chorismate mutase/prephenate dehydratase complement(4190419..4191579) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473781.1 CDS CFSAN001992_20345 NC_020307.1 4191830 4192168 R COG1544 Ribosome-associated protein Y (PSrp-1); translation inhibitor protein RaiA complement(4191830..4192168) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473782.1 CDS CFSAN001992_20350 NC_020307.1 4192440 4193177 R COG4105 DNA uptake lipoprotein; outer membrane biogenesis protein BamD complement(4192440..4193177) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473783.1 CDS rluD NC_020307.1 4193309 4194289 D COG0564 Pseudouridylate synthases, 23S RNA-specific; 23S rRNA pseudouridine synthase D 4193309..4194289 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473784.1 CDS CFSAN001992_20360 NC_020307.1 4194286 4195017 D COG1496 Uncharacterized conserved protein; hypothetical protein 4194286..4195017 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473785.1 CDS CFSAN001992_20365 NC_020307.1 4195147 4197720 D COG0542 ATPases with chaperone activity, ATP-binding subunit; protein disaggregation chaperone 4195147..4197720 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473786.1 CDS CFSAN001992_20370 NC_020307.1 4203494 4203949 D hypothetical protein 4203494..4203949 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473787.1 CDS CFSAN001992_20375 NC_020307.1 4204053 4205354 D COG0477 Permeases of the major facilitator superfamily; alpha-ketoglutarate transporter 4204053..4205354 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473788.1 CDS CFSAN001992_20380 NC_020307.1 4205351 4205674 R COG5544 Predicted periplasmic lipoprotein; lipoprotein complement(4205351..4205674) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473789.1 CDS pssA NC_020307.1 4205719 4207074 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phosphatidylserine synthase complement(4205719..4207074) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473790.1 CDS CFSAN001992_20390 NC_020307.1 4207189 4209849 R COG1042 Acyl-CoA synthetase (NDP forming); protein lysine acetyltransferase complement(4207189..4209849) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473791.1 CDS CFSAN001992_20395 NC_020307.1 4209903 4210583 R COG3148 Uncharacterized conserved protein; DTW domain-containing protein complement(4209903..4210583) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473792.1 CDS CFSAN001992_20400 NC_020307.1 4210656 4211075 R COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 2 complement(4210656..4211075) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473793.1 CDS CFSAN001992_20405 NC_020307.1 4211279 4212316 D COG0566 rRNA methylases; methyltransferase 4211279..4212316 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473794.1 CDS CFSAN001992_20410 NC_020307.1 4212432 4213121 R COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase complement(4212432..4213121) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473795.1 CDS CFSAN001992_20415 NC_020307.1 4213440 4213823 D COG3445 Acid-induced glycyl radical enzyme; autonomous glycyl radical cofactor GrcA 4213440..4213823 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473796.1 CDS CFSAN001992_20420 NC_020307.1 4213885 4214472 R COG1280 Putative threonine efflux protein; cysteine/O-acetylserine exporter complement(4213885..4214472) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473797.1 CDS CFSAN001992_20425 NC_020307.1 4214575 4215474 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4214575..4215474 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473798.1 CDS CFSAN001992_20430 NC_020307.1 4215492 4216826 R COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase SrmB complement(4215492..4216826) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473799.1 CDS CFSAN001992_20435 NC_020307.1 4216956 4217693 D COG4123 Predicted O-methyltransferase; transferase 4216956..4217693 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473800.1 CDS CFSAN001992_20440 NC_020307.1 4217678 4219300 R COG0029 Aspartate oxidase; L-aspartate oxidase complement(4217678..4219300) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473801.1 CDS CFSAN001992_20445 NC_020307.1 4219725 4220300 D COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; RNA polymerase sigma factor RpoE 4219725..4220300 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473802.1 CDS CFSAN001992_20450 NC_020307.1 4220332 4220982 D COG3073 Negative regulator of sigma E activity; anti-RNA polymerase sigma factor SigE 4220332..4220982 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473803.1 CDS rseB NC_020307.1 4220982 4221938 D COG3026 Negative regulator of sigma E activity; anti-sigma E factor 4220982..4221938 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473804.1 CDS CFSAN001992_20460 NC_020307.1 4221935 4222414 D COG3086 Positive regulator of sigma E activity; SoxR reducing system protein RseC 4221935..4222414 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473805.1 CDS CFSAN001992_20465 NC_020307.1 4222912 4224141 D COG0582 Integrase; integrase-like protein 4222912..4224141 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473806.1 CDS CFSAN001992_20470 NC_020307.1 4224444 4224683 R bacteriophage protein complement(4224444..4224683) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473807.1 CDS CFSAN001992_20475 NC_020307.1 4224689 4225558 R COG0338 Site-specific DNA methylase; DNA methylase complement(4224689..4225558) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473808.1 CDS CFSAN001992_20480 NC_020307.1 4225555 4226235 R exonuclease complement(4225555..4226235) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473809.1 CDS CFSAN001992_20485 NC_020307.1 4226232 4227017 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; hypothetical protein complement(4226232..4227017) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473810.1 CDS CFSAN001992_20490 NC_020307.1 4227023 4227319 R Host-nuclease inhibitor protein Gam complement(4227023..4227319) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473811.1 CDS kil NC_020307.1 4227405 4227647 R FtsZ inhibitor protein complement(4227405..4227647) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473812.1 CDS CFSAN001992_20500 NC_020307.1 4227900 4228106 D bacteriophage protein 4227900..4228106 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473813.1 CDS CFSAN001992_20505 NC_020307.1 4228133 4228504 R COG4933 Uncharacterized conserved protein; phage associated protein complement(4228133..4228504) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473814.1 CDS CFSAN001992_20510 NC_020307.1 4228482 4229543 R hypothetical protein complement(4228482..4229543) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473815.1 CDS CFSAN001992_20515 NC_020307.1 4229613 4230008 R COG1396 Predicted transcriptional regulators; putative prophage protein HTH complement(4229613..4230008) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473816.1 CDS CFSAN001992_20520 NC_020307.1 4230113 4230349 D phage regulatory protein 4230113..4230349 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473817.1 CDS CFSAN001992_20525 NC_020307.1 4230540 4230689 D Gifsy-1 prophage cI protein 4230540..4230689 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473818.1 CDS CFSAN001992_20530 NC_020307.1 4230781 4231686 D phage replication protein O 4230781..4231686 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473819.1 CDS CFSAN001992_20535 NC_020307.1 4231683 4232384 D Replication protein P 4231683..4232384 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473820.1 CDS CFSAN001992_20540 NC_020307.1 4232381 4232830 D hypothetical protein 4232381..4232830 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473821.1 CDS CFSAN001992_20545 NC_020307.1 4232827 4233312 D hypothetical protein 4232827..4233312 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473822.1 CDS CFSAN001992_20550 NC_020307.1 4233339 4234331 R hypothetical protein complement(4233339..4234331) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473823.1 CDS CFSAN001992_20555 NC_020307.1 4234601 4234834 D COG1344 Flagellin and related hook-associated proteins; hypothetical protein 4234601..4234834 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473824.1 CDS CFSAN001992_20560 NC_020307.1 4235234 4235836 D putative bacteriophage protein 4235234..4235836 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473825.1 CDS CFSAN001992_20565 NC_020307.1 4235836 4236042 D COG0176 Transaldolase; hypothetical protein 4235836..4236042 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473826.1 CDS CFSAN001992_20570 NC_020307.1 4236045 4236434 D ninG 4236045..4236434 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473827.1 CDS CFSAN001992_20575 NC_020307.1 4236508 4237059 D hypothetical protein 4236508..4237059 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473828.1 CDS CFSAN001992_20580 NC_020307.1 4237248 4237649 R hypothetical protein complement(4237248..4237649) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473829.1 CDS CFSAN001992_20585 NC_020307.1 4237928 4238419 D hypothetical protein 4237928..4238419 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473830.1 CDS CFSAN001992_20590 NC_020307.1 4238511 4240514 D COG5525 Bacteriophage tail assembly protein; hypothetical protein 4238511..4240514 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473831.1 CDS CFSAN001992_20595 NC_020307.1 4240511 4240717 D hypothetical protein 4240511..4240717 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473832.1 CDS CFSAN001992_20600 NC_020307.1 4240714 4242249 D COG5511 Bacteriophage capsid protein; hypothetical protein 4240714..4242249 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473833.1 CDS CFSAN001992_20605 NC_020307.1 4242212 4244281 D COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent protease 4242212..4244281 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473834.1 CDS CFSAN001992_20610 NC_020307.1 4244370 4244903 D side tail fiber protein 4244370..4244903 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473835.1 CDS CFSAN001992_20615 NC_020307.1 4244903 4245481 D hypothetical protein 4244903..4245481 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473836.1 CDS CFSAN001992_20620 NC_020307.1 4246415 4249780 D hypothetical protein 4246415..4249780 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473837.1 CDS CFSAN001992_20625 NC_020307.1 4250307 4252106 D COG0481 Membrane GTPase LepA; GTP-binding protein LepA 4250307..4252106 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473838.1 CDS CFSAN001992_20630 NC_020307.1 4252123 4253097 D COG0681 Signal peptidase I; signal peptidase I 4252123..4253097 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473839.1 CDS rnc NC_020307.1 4253371 4254051 D COG0571 dsRNA-specific ribonuclease; ribonuclease III 4253371..4254051 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473840.1 CDS era NC_020307.1 4254048 4254953 D COG1159 GTPase; GTPase Era 4254048..4254953 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473841.1 CDS recO NC_020307.1 4254965 4255693 D COG1381 Recombinational DNA repair protein (RecF pathway); DNA repair protein RecO 4254965..4255693 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473842.1 CDS CFSAN001992_20650 NC_020307.1 4255705 4256436 D COG0854 Pyridoxal phosphate biosynthesis protein; pyridoxine 5'-phosphate synthase 4255705..4256436 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473843.1 CDS acpS NC_020307.1 4256436 4256816 D COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase 4256436..4256816 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473844.1 CDS CFSAN001992_20660 NC_020307.1 4256928 4257188 R COG1145 Ferredoxin; 4Fe-4S ferredoxin complement(4256928..4257188) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473845.1 CDS CFSAN001992_20665 NC_020307.1 4257226 4258152 R COG0583 Transcriptional regulator; LysR family transcriptional regulator complement(4257226..4258152) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473846.1 CDS CFSAN001992_20670 NC_020307.1 4258268 4259464 D COG0477 Permeases of the major facilitator superfamily; Major Facilitator Superfamily protein 4258268..4259464 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473847.1 CDS CFSAN001992_20675 NC_020307.1 4259486 4260403 D COG1893 Ketopantoate reductase; 2-dehydropantoate 2-reductase 4259486..4260403 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473848.1 CDS CFSAN001992_20680 NC_020307.1 4260442 4261290 R COG1737 Transcriptional regulators; DNA-binding transcriptional regulator complement(4260442..4261290) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473849.1 CDS murQ NC_020307.1 4261406 4262299 D COG2103 Predicted sugar phosphate isomerase; N-acetylmuramic acid-6-phosphate etherase 4261406..4262299 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473850.1 CDS CFSAN001992_20690 NC_020307.1 4262310 4263671 D COG1264 Phosphotransferase system IIB components; phosphotransferase system, eiic 4262310..4263671 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473851.1 CDS CFSAN001992_20695 NC_020307.1 4263675 4264310 D COG0560 Phosphoserine phosphatase; hypothetical protein 4263675..4264310 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473852.1 CDS CFSAN001992_20700 NC_020307.1 4264335 4264886 D COG0590 Cytosine/adenosine deaminases; tRNA-specific adenosine deaminase 4264335..4264886 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473853.1 CDS CFSAN001992_20705 NC_020307.1 4264937 4266481 R COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; membrane-bound lytic transglycosylase F complement(4264937..4266481) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473854.1 CDS CFSAN001992_20710 NC_020307.1 4266740 4270624 D COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; phosphoribosylformylglycinamidine synthase 4266740..4270624 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473855.1 CDS CFSAN001992_20715 NC_020307.1 4271273 4272703 D COG0642 Signal transduction histidine kinase; sensory histidine kinase GlrK 4271273..4272703 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473856.1 CDS CFSAN001992_20720 NC_020307.1 4272783 4273469 D hypothetical protein 4272783..4273469 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473857.1 CDS CFSAN001992_20725 NC_020307.1 4273466 4274803 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; response regulator GlrR 4273466..4274803 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473858.1 CDS CFSAN001992_20730 NC_020307.1 4274880 4275218 D COG0347 Nitrogen regulatory protein PII; nitrogen regulatory protein P-II 1 4274880..4275218 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473859.1 CDS CFSAN001992_20735 NC_020307.1 4275267 4276727 R COG3104 Dipeptide/tripeptide permease; Inner membrane transporter ybgH complement(4275267..4276727) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473860.1 CDS CFSAN001992_20740 NC_020307.1 4276783 4278927 R COG1982 Arginine/lysine/ornithine decarboxylases; lysine decarboxylase CadA complement(4276783..4278927) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473861.1 CDS cadB NC_020307.1 4279010 4280341 R COG0531 Amino acid transporters; lysine/cadaverine antiporter complement(4279010..4280341) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473862.1 CDS CFSAN001992_20750 NC_020307.1 4280702 4282243 R COG3710 DNA-binding winged-HTH domains; DNA-binding transcriptional activator CadC complement(4280702..4282243) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473863.1 CDS CFSAN001992_20755 NC_020307.1 4282424 4283614 R COG1017 Hemoglobin-like flavoprotein; bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 complement(4282424..4283614) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473864.1 CDS CFSAN001992_20760 NC_020307.1 4283655 4283801 D hypothetical protein 4283655..4283801 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473865.1 CDS glyA NC_020307.1 4283939 4285189 D COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 4283939..4285189 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473866.1 CDS CFSAN001992_20770 NC_020307.1 4285385 4286524 D COG0477 Permeases of the major facilitator superfamily; 3-phenylpropionic acid transporter 4285385..4286524 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473867.1 CDS CFSAN001992_20775 NC_020307.1 4286519 4287796 R COG3711 Transcriptional antiterminator; stationary phase inducible protein CsiE complement(4286519..4287796) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473868.1 CDS CFSAN001992_20780 NC_020307.1 4287922 4288560 D COG3683 ABC-type uncharacterized transport system, periplasmic component; hypothetical protein 4287922..4288560 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473869.1 CDS CFSAN001992_20785 NC_020307.1 4288551 4289537 D COG2215 ABC-type uncharacterized transport system, permease component; High-affinity nickel-transport protein 4288551..4289537 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473870.1 CDS CFSAN001992_20790 NC_020307.1 4289538 4290551 R COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; sulfite reductase subunit C complement(4289538..4290551) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473871.1 CDS CFSAN001992_20795 NC_020307.1 4290562 4291380 R COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; anaerobic sulfite reductase subunit B complement(4290562..4291380) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473872.1 CDS CFSAN001992_20800 NC_020307.1 4291384 4292427 R COG1145 Ferredoxin; anaerobic sulfite reductase subunit A complement(4291384..4292427) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473873.1 CDS CFSAN001992_20805 NC_020307.1 4292609 4293487 R COG1073 Hydrolases of the alpha/beta superfamily; hypothetical protein complement(4292609..4293487) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473874.1 CDS CFSAN001992_20810 NC_020307.1 4293632 4294435 R COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; inositol monophosphatase complement(4293632..4294435) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473875.1 CDS CFSAN001992_20815 NC_020307.1 4294554 4295285 D COG0565 rRNA methylase; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ 4294554..4295285 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473876.1 CDS CFSAN001992_20820 NC_020307.1 4295445 4295939 D COG1959 Predicted transcriptional regulator; DNA-binding transcriptional regulator IscR 4295445..4295939 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473877.1 CDS CFSAN001992_20835 NC_020307.1 4297364 4297750 D COG0822 NifU homolog involved in Fe-S cluster formation; scaffold protein 4297364..4297750 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473878.1 CDS iscA NC_020307.1 4297779 4298102 D COG0316 Uncharacterized conserved protein; iron-sulfur cluster assembly protein 4297779..4298102 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473879.1 CDS hscB NC_020307.1 4298298 4298813 D COG1076 DnaJ-domain-containing proteins 1; co-chaperone HscB 4298298..4298813 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473880.1 CDS hscA NC_020307.1 4298826 4300676 D COG0443 Molecular chaperone; chaperone protein HscA 4298826..4300676 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473881.1 CDS CFSAN001992_20855 NC_020307.1 4300678 4301013 D COG0633 Ferredoxin; Adrenodoxin-like protein 4300678..4301013 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473882.1 CDS CFSAN001992_20860 NC_020307.1 4301025 4301225 D COG2975 Uncharacterized protein conserved in bacteria; hypothetical protein 4301025..4301225 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473883.1 CDS CFSAN001992_20865 NC_020307.1 4301279 4302562 D COG0260 Leucyl aminopeptidase; aminopeptidase B 4301279..4302562 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473884.1 CDS CFSAN001992_20870 NC_020307.1 4302672 4303448 D enhanced serine sensitivity protein SseB 4302672..4303448 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473885.1 CDS CFSAN001992_20875 NC_020307.1 4303834 4303962 D hypothetical protein 4303834..4303962 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473886.1 CDS CFSAN001992_20880 NC_020307.1 4304017 4304685 R hypothetical protein complement(4304017..4304685) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473887.1 CDS sseA NC_020307.1 4304932 4305774 R COG2897 Rhodanese-related sulfurtransferase; 3-mercaptopyruvate sulfurtransferase complement(4304932..4305774) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473888.1 CDS CFSAN001992_20890 NC_020307.1 4305983 4310917 D COG2373 Large extracellular alpha-helical protein; lipoprotein 4305983..4310917 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473889.1 CDS CFSAN001992_20895 NC_020307.1 4310918 4313233 D COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; penicillin-binding protein 1C 4310918..4313233 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473890.1 CDS CFSAN001992_20900 NC_020307.1 4313389 4315767 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; putative anaerobic dimethylsulfoxide reductase 4313389..4315767 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473891.1 CDS CFSAN001992_20905 NC_020307.1 4315764 4316393 D COG0437 Fe-S-cluster-containing hydrogenase components 1; Formate dehydrogenase, iron-sulfur subunit Formate dehydrogenase subunit beta , FDH subunit beta 4315764..4316393 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473892.1 CDS CFSAN001992_20910 NC_020307.1 4316386 4317195 D COG3302 DMSO reductase anchor subunit; anaerobic reductase component 4316386..4317195 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473893.1 CDS CFSAN001992_20915 NC_020307.1 4317195 4318058 D COG1145 Ferredoxin; polyferredoxin 4317195..4318058 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473894.1 CDS ndk NC_020307.1 4318179 4318610 D COG0105 Nucleoside diphosphate kinase; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase 4318179..4318610 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473895.1 CDS CFSAN001992_20925 NC_020307.1 4318817 4319983 D COG0820 Predicted Fe-S-cluster redox enzyme; ribosomal RNA large subunit methyltransferase N 4318817..4319983 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473896.1 CDS CFSAN001992_20930 NC_020307.1 4320276 4321280 D COG1426 Uncharacterized protein conserved in bacteria; cytoskeletal protein RodZ 4320276..4321280 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473897.1 CDS ispG NC_020307.1 4321307 4322425 D COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 4321307..4322425 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473898.1 CDS hisS NC_020307.1 4322536 4323810 D COG0124 Histidyl-tRNA synthetase; histidyl-tRNA ligase 4322536..4323810 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473899.1 CDS CFSAN001992_20945 NC_020307.1 4323824 4324444 D COG2976 Uncharacterized protein conserved in bacteria; hypothetical protein 4323824..4324444 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473900.1 CDS CFSAN001992_20950 NC_020307.1 4324455 4325633 D COG1520 FOG: WD40-like repeat; outer membrane biogenesis protein BamB 4324455..4325633 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473901.1 CDS CFSAN001992_20955 NC_020307.1 4325750 4327222 D COG1160 Predicted GTPases; GTP-binding protein Der 4325750..4327222 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473902.1 CDS CFSAN001992_20960 NC_020307.1 4327311 4327532 D hypothetical protein 4327311..4327532 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473903.1 CDS CFSAN001992_20965 NC_020307.1 4327879 4330071 D intimin-like protein SinH 4327879..4330071 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473904.1 CDS CFSAN001992_20970 NC_020307.1 4330129 4331094 D hypothetical protein 4330129..4331094 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473905.1 CDS CFSAN001992_20975 NC_020307.1 4331232 4336817 D outer membrane protein RatA 4331232..4336817 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473906.1 CDS CFSAN001992_20980 NC_020307.1 4336943 4344253 D outer membrane protein RatB 4336943..4344253 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473907.1 CDS CFSAN001992_20985 NC_020307.1 4344895 4350750 D COG3468 Type V secretory pathway, adhesin AidA; AIDA autotransporter-like protein ShdA 4344895..4350750 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473908.1 CDS xseA NC_020307.1 4350912 4352261 R COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit complement(4350912..4352261) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473909.1 CDS CFSAN001992_20995 NC_020307.1 4352422 4353888 D COG0516 IMP dehydrogenase/GMP reductase; inosine 5'-monophosphate dehydrogenase 4352422..4353888 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473910.1 CDS guaA NC_020307.1 4353958 4355535 D COG0518 GMP synthase - Glutamine amidotransferase domain; GMP synthase 4353958..4355535 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473911.1 CDS CFSAN001992_21005 NC_020307.1 4355851 4356255 R COG4316 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4355851..4356255) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473912.1 CDS CFSAN001992_21020 NC_020307.1 4357130 4358593 R COG5361 Uncharacterized conserved protein; hypothetical protein complement(4357130..4358593) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473913.1 CDS CFSAN001992_21025 NC_020307.1 4358608 4360086 R COG5361 Uncharacterized conserved protein; hypothetical protein complement(4358608..4360086) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473914.1 CDS CFSAN001992_21030 NC_020307.1 4360425 4360793 D mechanosensitive ion channel protein MscS 4360425..4360793 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473915.1 CDS CFSAN001992_21035 NC_020307.1 4360858 4361397 R Hydrocephalus-inducing protein Hy-3 complement(4360858..4361397) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473916.1 CDS CFSAN001992_21040 NC_020307.1 4361413 4361931 R outer membrane lipoprotein complement(4361413..4361931) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473917.1 CDS CFSAN001992_21045 NC_020307.1 4362157 4362348 R hypothetical protein complement(4362157..4362348) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473918.1 CDS CFSAN001992_21050 NC_020307.1 4362362 4362490 D hypothetical protein 4362362..4362490 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473919.1 CDS CFSAN001992_21055 NC_020307.1 4362761 4364974 D COG2199 FOG: GGDEF domain; hypothetical protein 4362761..4364974 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473920.1 CDS CFSAN001992_21060 NC_020307.1 4365010 4366551 R COG0248 Exopolyphosphatase; exopolyphosphatase complement(4365010..4366551) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473921.1 CDS CFSAN001992_21065 NC_020307.1 4366556 4368622 R COG0855 Polyphosphate kinase; polyphosphate kinase complement(4366556..4368622) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473922.1 CDS purN NC_020307.1 4368811 4369449 R COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; phosphoribosylglycinamide formyltransferase complement(4368811..4369449) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473923.1 CDS CFSAN001992_21075 NC_020307.1 4369449 4370486 R COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; phosphoribosylaminoimidazole synthetase complement(4369449..4370486) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473924.1 CDS upp NC_020307.1 4370900 4371526 D COG0035 Uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 4370900..4371526 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473925.1 CDS CFSAN001992_21085 NC_020307.1 4371614 4372903 D COG2233 Xanthine/uracil permeases; uracil transporter 4371614..4372903 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473926.1 CDS CFSAN001992_21090 NC_020307.1 4372974 4373699 D COG0593 ATPase involved in DNA replication initiation; DNA replication initiation factor 4372974..4373699 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473927.1 CDS CFSAN001992_21095 NC_020307.1 4373726 4374085 R COG1393 Arsenate reductase and related proteins, glutaredoxin family; arsenate reductase complement(4373726..4374085) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473928.1 CDS CFSAN001992_21100 NC_020307.1 4374125 4375588 R COG4783 Putative Zn-dependent protease, contains TPR repeats; TPR repeat-containing protein YfgC complement(4374125..4375588) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473929.1 CDS CFSAN001992_21105 NC_020307.1 4375796 4376863 D COG0628 Predicted permease; putative permease perM 4375796..4376863 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473930.1 CDS CFSAN001992_21110 NC_020307.1 4377139 4378326 D COG3835 Sugar diacid utilization regulator; hypothetical protein 4377139..4378326 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473931.1 CDS CFSAN001992_21115 NC_020307.1 4378394 4379662 D COG2610 H+/gluconate symporter and related permeases; permease 4378394..4379662 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473932.1 CDS CFSAN001992_21120 NC_020307.1 4379668 4380807 D COG1929 Glycerate kinase; putative glycerate kinase 4379668..4380807 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473933.1 CDS bcp NC_020307.1 4380854 4381324 R COG1225 Peroxiredoxin; thioredoxin-dependent thiol peroxidase complement(4380854..4381324) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473934.1 CDS gcvR NC_020307.1 4381324 4381896 R COG2716 Glycine cleavage system regulatory protein; glycine cleavage system transcriptional repressor complement(4381324..4381896) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473935.1 CDS CFSAN001992_21135 NC_020307.1 4382042 4382920 D COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase 4382042..4382920 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473936.1 CDS CFSAN001992_21140 NC_020307.1 4382937 4383971 D COG3317 Uncharacterized lipoprotein; lipoprotein 4382937..4383971 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473937.1 CDS CFSAN001992_21145 NC_020307.1 4384146 4384859 D COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 4384146..4384859 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473938.1 CDS CFSAN001992_21150 NC_020307.1 4384990 4385853 D COG2321 Predicted metalloprotease; zinc protease 4384990..4385853 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473939.1 CDS CFSAN001992_21155 NC_020307.1 4385869 4386534 D COG1444 Predicted P-loop ATPase fused to an acetyltransferase; overlaps another CDS with the same product name; methionine tRNA cytidine acetyltransferase 4385869..4386534 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473940.1 CDS CFSAN001992_21160 NC_020307.1 4386513 4387886 D COG1444 Predicted P-loop ATPase fused to an acetyltransferase; overlaps another CDS with the same product name; methionine tRNA cytidine acetyltransferase 4386513..4387886 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473941.1 CDS CFSAN001992_21165 NC_020307.1 4387913 4388113 R hypothetical protein complement(4387913..4388113) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473942.1 CDS CFSAN001992_21170 NC_020307.1 4388141 4389268 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase complement(4388141..4389268) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473943.1 CDS CFSAN001992_21175 NC_020307.1 4389272 4389628 R COG1393 Arsenate reductase and related proteins, glutaredoxin family; reductase complement(4389272..4389628) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473944.1 CDS CFSAN001992_21180 NC_020307.1 4390202 4393315 R COG0841 Cation/multidrug efflux pump; aminoglycoside/multidrug efflux system complement(4390202..4393315) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473945.1 CDS CFSAN001992_21185 NC_020307.1 4393500 4395200 R COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific; nitrate/nitrite sensor protein NarQ complement(4393500..4395200) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473946.1 CDS CFSAN001992_21190 NC_020307.1 4395386 4397347 D COG1142 Fe-S-cluster-containing hydrogenase components 2; oxidoreductase Fe-S binding subunit 4395386..4397347 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473947.1 CDS CFSAN001992_21195 NC_020307.1 4397795 4399093 R COG1680 Beta-lactamase class C and other penicillin binding proteins; periplasmic esterase complement(4397795..4399093) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473948.1 CDS CFSAN001992_21200 NC_020307.1 4399297 4399872 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; GDP-mannose pyrophosphatase NudK 4399297..4399872 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473949.1 CDS CFSAN001992_21205 NC_020307.1 4399997 4401040 D periplasmic protein 4399997..4401040 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473950.1 CDS CFSAN001992_21210 NC_020307.1 4401169 4401399 D hypothetical protein 4401169..4401399 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473951.1 CDS CFSAN001992_21215 NC_020307.1 4401462 4403462 R COG0021 Transketolase; transketolase complement(4401462..4403462) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473952.1 CDS CFSAN001992_21220 NC_020307.1 4403482 4404432 R COG0176 Transaldolase; transaldolase A complement(4403482..4404432) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473953.1 CDS CFSAN001992_21225 NC_020307.1 4404704 4406983 D COG0281 Malic enzyme; bifunctional malic enzyme oxidoreductase/phosphotransacetylase 4404704..4406983 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473954.1 CDS CFSAN001992_21230 NC_020307.1 4407400 4407735 D COG4810 Ethanolamine utilization protein; carboxysome structural protein EutS 4407400..4407735 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473955.1 CDS CFSAN001992_21235 NC_020307.1 4407748 4408227 D COG4917 Ethanolamine utilization protein; ethanolamine utilization protein EutP 4407748..4408227 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473956.1 CDS CFSAN001992_21240 NC_020307.1 4408205 4408894 D COG4766 Ethanolamine utilization protein; ethanolamine utilization protein EutQ 4408205..4408894 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473957.1 CDS CFSAN001992_21245 NC_020307.1 4408891 4409694 D COG4812 Ethanolamine utilization cobalamin adenosyltransferase; ethanolamine utilization cobalamin adenosyltransferase 4408891..4409694 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473958.1 CDS eutD NC_020307.1 4409691 4410707 D COG0280 Phosphotransacetylase; phosphotransacetylase 4409691..4410707 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473959.1 CDS CFSAN001992_21255 NC_020307.1 4410748 4411038 D COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; carboxysome structural protein EutM 4410748..4411038 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473960.1 CDS CFSAN001992_21260 NC_020307.1 4411151 4411438 D COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; ethanolamine utilization protein eutN 4411151..4411438 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473961.1 CDS CFSAN001992_21265 NC_020307.1 4411450 4412853 D COG1012 NAD-dependent aldehyde dehydrogenases; aldehyde dehydrogenase EutE 4411450..4412853 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473962.1 CDS CFSAN001992_21270 NC_020307.1 4412864 4413703 D COG4820 Ethanolamine utilization protein, possible chaperonin; ethanolamine utilization protein EutJ 4412864..4413703 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473963.1 CDS CFSAN001992_21275 NC_020307.1 4413693 4414889 D COG1454 Alcohol dehydrogenase, class IV; ethanol dehydrogenase EutG 4413693..4414889 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473964.1 CDS CFSAN001992_21280 NC_020307.1 4415000 4416226 D COG3192 Ethanolamine utilization protein; ethanolamine utilization protein EutH 4415000..4416226 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473965.1 CDS eutA NC_020307.1 4416223 4417626 D COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition; reactivating factor for ethanolamine ammonia lyase 4416223..4417626 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473966.1 CDS CFSAN001992_21290 NC_020307.1 4417638 4418999 D COG4303 Ethanolamine ammonia-lyase, large subunit; ethanolamine ammonia lyase large subunit 4417638..4418999 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473967.1 CDS CFSAN001992_21295 NC_020307.1 4419018 4419914 D COG4302 Ethanolamine ammonia-lyase, small subunit; ethanolamine ammonia-lyase small subunit 4419018..4419914 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473968.1 CDS CFSAN001992_21300 NC_020307.1 4419924 4420583 D COG4816 Ethanolamine utilization protein; ethanolamine utilization protein EutL 4419924..4420583 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473969.1 CDS CFSAN001992_21305 NC_020307.1 4420596 4421090 D COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; carboxysome structural protein EutK 4420596..4421090 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473970.1 CDS CFSAN001992_21310 NC_020307.1 4421138 4422190 D COG2207 AraC-type DNA-binding domain-containing proteins; transcriptional regulator EutR 4421138..4422190 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473971.1 CDS CFSAN001992_21315 NC_020307.1 4422290 4423189 R COG0408 Coproporphyrinogen III oxidase; coproporphyrinogen III oxidase complement(4422290..4423189) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473972.1 CDS CFSAN001992_21320 NC_020307.1 4423192 4424061 R COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase I complement(4423192..4424061) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473973.1 CDS CFSAN001992_21325 NC_020307.1 4424274 4424699 D COG0456 Acetyltransferases; acetyltransferase 4424274..4424699 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473974.1 CDS CFSAN001992_21330 NC_020307.1 4424686 4425135 D hypothetical protein 4424686..4425135 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473975.1 CDS CFSAN001992_21335 NC_020307.1 4425197 4425772 D RpoE-regulated lipoprotein 4425197..4425772 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473976.1 CDS CFSAN001992_21340 NC_020307.1 4425867 4426766 D COG2837 Predicted iron-dependent peroxidase; dyp-type peroxidase family protein 4425867..4426766 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473977.1 CDS CFSAN001992_21345 NC_020307.1 4427004 4427795 D COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase 4427004..4427795 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473978.1 CDS CFSAN001992_21350 NC_020307.1 4427953 4428969 D COG4150 ABC-type sulfate transport system, periplasmic component; thiosulfate transporter subunit 4427953..4428969 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473979.1 CDS CFSAN001992_21355 NC_020307.1 4428969 4429802 D COG0555 ABC-type sulfate transport system, permease component; sulfate/thiosulfate transporter subunit 4428969..4429802 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473980.1 CDS cysW NC_020307.1 4429802 4430677 D COG4208 ABC-type sulfate transport system, permease component; sulfate/thiosulfate transporter permease subunit 4429802..4430677 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473981.1 CDS CFSAN001992_21365 NC_020307.1 4430667 4431761 D COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; sulfate/thiosulfate transporter subunit 4430667..4431761 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473982.1 CDS CFSAN001992_21370 NC_020307.1 4431766 4431891 R hypothetical protein complement(4431766..4431891) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473983.1 CDS cysM NC_020307.1 4431882 4432793 D COG0031 Cysteine synthase; cysteine synthase B 4431882..4432793 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473984.1 CDS CFSAN001992_21380 NC_020307.1 4432826 4433185 R hypothetical protein complement(4432826..4433185) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473985.1 CDS CFSAN001992_21385 NC_020307.1 4433262 4433981 R COG0518 GMP synthase - Glutamine amidotransferase domain; glutamine amidotransferase complement(4433262..4433981) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473986.1 CDS CFSAN001992_21390 NC_020307.1 4433996 4435288 R COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; transcriptional regulatory protein PtsJ complement(4433996..4435288) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473987.1 CDS pdxK NC_020307.1 4435371 4436237 D COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase 4435371..4436237 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473988.1 CDS CFSAN001992_21400 NC_020307.1 4436234 4436473 D hypothetical protein 4436234..4436473 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473989.1 CDS CFSAN001992_21405 NC_020307.1 4436637 4437146 R COG2190 Phosphotransferase system IIA components; PTS system glucose-specific transporter subunit IIA complement(4436637..4437146) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473990.1 CDS CFSAN001992_21410 NC_020307.1 4437187 4438914 R COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); phosphoenolpyruvate-protein phosphotransferase complement(4437187..4438914) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473991.1 CDS CFSAN001992_21415 NC_020307.1 4438963 4439220 R COG1925 Phosphotransferase system, HPr-related proteins; phosphocarrier protein ptsH complement(4438963..4439220) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473992.1 CDS CFSAN001992_21420 NC_020307.1 4439360 4439485 D hypothetical protein 4439360..4439485 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473993.1 CDS CFSAN001992_21425 NC_020307.1 4439604 4440575 R COG0031 Cysteine synthase; cysteine synthase A complement(4439604..4440575) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473994.1 CDS CFSAN001992_21430 NC_020307.1 4440887 4441648 R COG2981 Uncharacterized protein involved in cysteine biosynthesis; sulfate transport protein CysZ complement(4440887..4441648) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473995.1 CDS CFSAN001992_21435 NC_020307.1 4441880 4442866 D COG3115 Cell division protein; cell division protein ZipA 4441880..4442866 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473996.1 CDS ligA NC_020307.1 4442938 4444953 D COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA 4442938..4444953 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473997.1 CDS CFSAN001992_21445 NC_020307.1 4444955 4445173 D COG3530 Uncharacterized protein conserved in bacteria; hypothetical protein 4444955..4445173 Salmonella enterica subsp. enterica serovar Javiana str. YP_007473998.1 CDS CFSAN001992_21450 NC_020307.1 4445170 4446168 R COG0385 Predicted Na+-dependent transporter; Sodium/bile acid cotransporter 7-B complement(4445170..4446168) Salmonella enterica subsp. enterica serovar Javiana str. YP_007473999.1 CDS CFSAN001992_21455 NC_020307.1 4446258 4447184 D COG0583 Transcriptional regulator; LysR family transcriptional regulator 4446258..4447184 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474000.1 CDS CFSAN001992_21460 NC_020307.1 4447246 4448007 R hypothetical protein complement(4447246..4448007) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474001.1 CDS CFSAN001992_21465 NC_020307.1 4448263 4449096 D COG0005 Purine nucleoside phosphorylase; purine nucleoside phosphorylase 4448263..4449096 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474002.1 CDS CFSAN001992_21470 NC_020307.1 4449151 4450407 D COG0477 Permeases of the major facilitator superfamily; nucleoside permease NupG 4449151..4450407 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474003.1 CDS CFSAN001992_21475 NC_020307.1 4450466 4450624 D hypothetical protein 4450466..4450624 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474004.1 CDS CFSAN001992_21480 NC_020307.1 4450676 4451560 D COG0583 Transcriptional regulator; DNA-binding transcriptional activator XapR 4450676..4451560 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474005.1 CDS gltX NC_020307.1 4452682 4454097 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA ligase 4452682..4454097 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474006.1 CDS CFSAN001992_21490 NC_020307.1 4454151 4454543 R hypothetical protein complement(4454151..4454543) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474007.1 CDS CFSAN001992_21495 NC_020307.1 4454545 4454907 R hypothetical protein complement(4454545..4454907) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474008.1 CDS CFSAN001992_21500 NC_020307.1 4455513 4457702 D COG2199 FOG: GGDEF domain; diguanylate cyclase 4455513..4457702 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474009.1 CDS CFSAN001992_21505 NC_020307.1 4457755 4458957 R COG1972 Nucleoside permease; Nucleoside permease nupC complement(4457755..4458957) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474010.1 CDS CFSAN001992_21510 NC_020307.1 4459300 4460541 D COG1914 Mn2+ and Fe2+ transporters of the NRAMP family; manganese transport protein MntH 4459300..4460541 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474011.1 CDS CFSAN001992_21515 NC_020307.1 4460602 4460928 R hypothetical protein complement(4460602..4460928) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474012.1 CDS CFSAN001992_21520 NC_020307.1 4461042 4462040 R COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); oxidoreductase, aldo/keto reductase family protein complement(4461042..4462040) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474013.1 CDS CFSAN001992_21525 NC_020307.1 4462220 4463872 D COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes; indolepyruvate decarboxylase 4462220..4463872 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474014.1 CDS CFSAN001992_21530 NC_020307.1 4463892 4465127 R ion channel protein complement(4463892..4465127) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474015.1 CDS CFSAN001992_21545 NC_020307.1 4466571 4466897 D COG1445 Phosphotransferase system fructose-specific component IIB; hypothetical protein 4466571..4466897 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474016.1 CDS CFSAN001992_21550 NC_020307.1 4466918 4468165 D COG1299 Phosphotransferase system, fructose-specific IIC component; hypothetical protein 4466918..4468165 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474017.1 CDS CFSAN001992_21555 NC_020307.1 4468182 4469264 D COG0006 Xaa-Pro aminopeptidase; aminopeptidase 4468182..4469264 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474018.1 CDS CFSAN001992_21560 NC_020307.1 4469264 4470304 D COG1363 Cellulase M and related proteins; exoaminopeptidase 4469264..4470304 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474019.1 CDS CFSAN001992_21565 NC_020307.1 4470326 4472821 D COG1925 Phosphotransferase system, HPr-related proteins; mulitfunctional phosphoenolpyruvate-protein phosphotransferase subunit IIA 4470326..4472821 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474020.1 CDS CFSAN001992_21570 NC_020307.1 4472923 4473777 R COG2207 AraC-type DNA-binding domain-containing proteins; hypothetical protein complement(4472923..4473777) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474021.1 CDS CFSAN001992_21575 NC_020307.1 4474365 4475603 D COG0436 Aspartate/tyrosine/aromatic aminotransferase; aminotransferase 4474365..4475603 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474022.1 CDS CFSAN001992_21580 NC_020307.1 4476124 4477044 R COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis palmitoleoyl acyltransferase complement(4476124..4477044) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474023.1 CDS CFSAN001992_21585 NC_020307.1 4477292 4477405 D hypothetical protein 4477292..4477405 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474024.1 CDS CFSAN001992_21590 NC_020307.1 4477566 4477808 D hypothetical protein 4477566..4477808 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474025.1 CDS CFSAN001992_21595 NC_020307.1 4478084 4479475 R COG2271 Sugar phosphate permease; Phosphoglycerate transporter protein PgtP complement(4478084..4479475) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474026.1 CDS CFSAN001992_21600 NC_020307.1 4479911 4481104 D COG1840 ABC-type Fe3+ transport system, periplasmic component; phosphoglycerate transport regulatory protein precursor 4479911..4481104 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474027.1 CDS CFSAN001992_21605 NC_020307.1 4481101 4483107 D COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system; phosphoglycerate transport system sensor protein PgtB 4481101..4483107 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474028.1 CDS CFSAN001992_21610 NC_020307.1 4483097 4484344 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; phosphoglycerate transport system transcriptional regulator PgtA 4483097..4484344 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474029.1 CDS CFSAN001992_21615 NC_020307.1 4484612 4485550 D COG4571 Outer membrane protease; outer membrane protease 4484612..4485550 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474030.1 CDS CFSAN001992_21620 NC_020307.1 4485857 4486798 R COG2116 Formate/nitrite family of transporters; hypothetical protein complement(4485857..4486798) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474031.1 CDS CFSAN001992_21625 NC_020307.1 4487087 4487842 D COG2853 Surface lipoprotein; ABC transporter outer membrane lipoprotein 4487087..4487842 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474032.1 CDS CFSAN001992_21630 NC_020307.1 4487903 4489210 R COG2067 Long-chain fatty acid transport protein; long-chain fatty acid outer membrane transporter complement(4487903..4489210) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474033.1 CDS CFSAN001992_21635 NC_020307.1 4489581 4489865 D COG3691 Uncharacterized protein conserved in bacteria; putative cytoplasmic protein 4489581..4489865 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474034.1 CDS fadI NC_020307.1 4490043 4491353 D COG0183 Acetyl-CoA acetyltransferase; 3-ketoacyl-CoA thiolase 4490043..4491353 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474035.1 CDS fadJ NC_020307.1 4491353 4493500 D COG1024 Enoyl-CoA hydratase/carnithine racemase; multifunctional fatty acid oxidation complex subunit alpha 4491353..4493500 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474036.1 CDS CFSAN001992_21650 NC_020307.1 4493709 4494194 D COG2062 Phosphohistidine phosphatase SixA; phosphohistidine phosphatase 4493709..4494194 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474037.1 CDS CFSAN001992_21655 NC_020307.1 4494294 4494845 R COG2840 Uncharacterized protein conserved in bacteria; hypothetical protein complement(4494294..4494845) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474038.1 CDS CFSAN001992_21660 NC_020307.1 4495011 4495943 D COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 4495011..4495943 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474039.1 CDS CFSAN001992_21665 NC_020307.1 4495979 4497064 D COG0082 Chorismate synthase; chorismate synthase 4495979..4497064 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474040.1 CDS mepA NC_020307.1 4497068 4497892 D COG3770 Murein endopeptidase; penicillin-insensitive murein endopeptidase 4497068..4497892 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474041.1 CDS CFSAN001992_21675 NC_020307.1 4497892 4498701 D COG0730 Predicted permeases; hypothetical protein 4497892..4498701 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474042.1 CDS CFSAN001992_21680 NC_020307.1 4498701 4499249 D COG3101 Uncharacterized protein conserved in bacteria; hypothetical protein 4498701..4499249 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474043.1 CDS CFSAN001992_21685 NC_020307.1 4499282 4499557 D hypothetical protein 4499282..4499557 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474044.1 CDS mnmC NC_020307.1 4499609 4500118 R COG0665 Glycine/D-amino acid oxidases (deaminating); overlaps another CDS with the same product name; bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase complement(4499609..4500118) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474045.1 CDS mnmC NC_020307.1 4500094 4501608 R COG4121 Uncharacterized conserved protein; overlaps another CDS with the same product name; bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase complement(4500094..4501608) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474046.1 CDS CFSAN001992_21700 NC_020307.1 4501768 4502982 D COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase I 4501768..4502982 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474047.1 CDS CFSAN001992_21705 NC_020307.1 4503080 4503736 D COG1266 Predicted metal-dependent membrane protease; hypothetical protein 4503080..4503736 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474048.1 CDS CFSAN001992_21710 NC_020307.1 4503803 4503997 R periplasmic protein complement(4503803..4503997) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474049.1 CDS CFSAN001992_21715 NC_020307.1 4504064 4504357 D Putative bacteriophage protein 4504064..4504357 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474050.1 CDS CFSAN001992_21720 NC_020307.1 4504537 4505715 D COG0477 Permeases of the major facilitator superfamily; transporter 4504537..4505715 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474051.1 CDS flk NC_020307.1 4505712 4506713 R flagella biosynthesis regulator complement(4505712..4506713) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474052.1 CDS CFSAN001992_21730 NC_020307.1 4506817 4507953 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; erythronate-4-phosphate dehydrogenase PdxB 4506817..4507953 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474053.1 CDS CFSAN001992_21735 NC_020307.1 4508021 4509034 D COG0136 Aspartate-semialdehyde dehydrogenase; semialdehyde dehydrogenase 4508021..4509034 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474054.1 CDS truA NC_020307.1 4509034 4509846 D COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 4509034..4509846 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474055.1 CDS CFSAN001992_21745 NC_020307.1 4509895 4510554 D COG0586 Uncharacterized membrane-associated protein; hypothetical protein 4509895..4510554 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474056.1 CDS CFSAN001992_21750 NC_020307.1 4510704 4511618 D COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta 4510704..4511618 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474057.1 CDS CFSAN001992_21755 NC_020307.1 4511686 4512954 D COG0285 Folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 4511686..4512954 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474058.1 CDS CFSAN001992_21760 NC_020307.1 4512944 4513618 D COG3147 Uncharacterized protein conserved in bacteria; cell division protein DedD 4512944..4513618 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474059.1 CDS CFSAN001992_21765 NC_020307.1 4513929 4514417 D COG1286 Uncharacterized membrane protein, required for colicin V production; colicin V production protein 4513929..4514417 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474060.1 CDS CFSAN001992_21770 NC_020307.1 4514455 4515972 D COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; amidophosphoribosyltransferase 4514455..4515972 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474061.1 CDS CFSAN001992_21775 NC_020307.1 4516008 4517435 R COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains; putative sigma L-dependent transcriptional regulator yqiR complement(4516008..4517435) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474062.1 CDS CFSAN001992_21780 NC_020307.1 4517646 4519043 D COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 4517646..4519043 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474063.1 CDS CFSAN001992_21785 NC_020307.1 4519134 4520555 D COG0531 Amino acid transporters; High-affinity glutamine permease 4519134..4520555 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474064.1 CDS CFSAN001992_21790 NC_020307.1 4520557 4521660 D COG3457 Predicted amino acid racemase; amino acid racemase 4520557..4521660 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474065.1 CDS CFSAN001992_21795 NC_020307.1 4521724 4523130 D COG0833 Amino acid transporters; putative amino-acid permease P7G5.06 4521724..4523130 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474066.1 CDS CFSAN001992_21800 NC_020307.1 4523157 4523726 D COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 4523157..4523726 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474067.1 CDS CFSAN001992_21805 NC_020307.1 4524015 4524797 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; ABC transporter lysine/arginine/ornithine binding periplasmic protein 4524015..4524797 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474068.1 CDS CFSAN001992_21810 NC_020307.1 4525035 4525817 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; histidine ABC transporter substrate-binding protein HisJ 4525035..4525817 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474069.1 CDS CFSAN001992_21815 NC_020307.1 4526000 4526686 D COG4215 ABC-type arginine transport system, permease component; histidine/lysine/arginine/ornithine ABC transporter permease HisQ 4526000..4526686 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474070.1 CDS CFSAN001992_21820 NC_020307.1 4526683 4527390 D COG4160 ABC-type arginine/histidine transport system, permease component; histidine/lysine/arginine/ornithine ABC transporter permease HisM 4526683..4527390 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474071.1 CDS CFSAN001992_21825 NC_020307.1 4527404 4528177 D COG4598 ABC-type histidine transport system, ATPase component; histidine/lysine/arginine/ornithine transporter subunit 4527404..4528177 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474072.1 CDS CFSAN001992_21830 NC_020307.1 4528229 4529122 R COG1090 Predicted nucleoside-diphosphate sugar epimerase; hypothetical protein complement(4528229..4529122) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474073.1 CDS CFSAN001992_21835 NC_020307.1 4529248 4529895 R COG0625 Glutathione S-transferase; glutathione-S transferase complement(4529248..4529895) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474074.1 CDS CFSAN001992_21840 NC_020307.1 4530038 4530682 D COG0625 Glutathione S-transferase; glutathione S-transferase 4530038..4530682 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474075.1 CDS CFSAN001992_21845 NC_020307.1 4530738 4531289 D COG0622 Predicted phosphoesterase; phosphodiesterase 4530738..4531289 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474076.1 CDS CFSAN001992_21850 NC_020307.1 4531349 4531900 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; NUDIX hydrolase YfcD 4531349..4531900 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474077.1 CDS CFSAN001992_21855 NC_020307.1 4531906 4532925 R COG1609 Transcriptional regulators; HTH-type transcriptional repressor purR complement(4531906..4532925) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474078.1 CDS CFSAN001992_21860 NC_020307.1 4533006 4533179 R hypothetical protein complement(4533006..4533179) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474079.1 CDS CFSAN001992_21865 NC_020307.1 4533178 4533621 D COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); PTS system transporter subunit IIA 4533178..4533621 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474080.1 CDS CFSAN001992_21870 NC_020307.1 4533702 4533974 D COG3414 Phosphotransferase system, galactitol-specific IIB component; putative sugar phosphotransferase component IIB 4533702..4533974 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474081.1 CDS ulaA NC_020307.1 4533995 4535386 D COG3037 Uncharacterized protein conserved in bacteria; PTS system ascorbate-specific transporter subunit IIC 4533995..4535386 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474082.1 CDS CFSAN001992_21880 NC_020307.1 4535383 4536213 D COG3959 Transketolase, N-terminal subunit; transketolase domain protein 4535383..4536213 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474083.1 CDS CFSAN001992_21885 NC_020307.1 4536206 4537159 D COG3958 Transketolase, C-terminal subunit; transketolase domain-containing protein 4536206..4537159 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474084.1 CDS CFSAN001992_21890 NC_020307.1 4537208 4538728 R COG1288 Predicted membrane protein; hypothetical protein complement(4537208..4538728) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474085.1 CDS CFSAN001992_21895 NC_020307.1 4538946 4541090 R COG0857 BioD-like N-terminal domain of phosphotransacetylase; phosphate acetyltransferase complement(4538946..4541090) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474086.1 CDS CFSAN001992_21900 NC_020307.1 4541167 4542369 R COG0282 Acetate kinase; acetate kinase A/propionate kinase 2 complement(4541167..4542369) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474087.1 CDS CFSAN001992_21905 NC_020307.1 4542709 4543164 D COG3092 Uncharacterized protein conserved in bacteria; hypothetical protein 4542709..4543164 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474088.1 CDS CFSAN001992_21910 NC_020307.1 4543247 4543741 D COG3013 Uncharacterized conserved protein; hypothetical protein 4543247..4543741 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474089.1 CDS CFSAN001992_21915 NC_020307.1 4543752 4544411 D COG0637 Predicted phosphatase/phosphohexomutase; phosphatase 4543752..4544411 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474090.1 CDS CFSAN001992_21920 NC_020307.1 4544488 4546314 D COG0471 Di- and tricarboxylate transporters; sodium/sulfate transporter 4544488..4546314 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474091.1 CDS CFSAN001992_21925 NC_020307.1 4546420 4547019 R COG1896 Predicted hydrolases of HD superfamily; 5'-nucleotidase complement(4546420..4547019) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474092.1 CDS CFSAN001992_21930 NC_020307.1 4547113 4548327 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; aminotransferase AlaT complement(4547113..4548327) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474093.1 CDS CFSAN001992_21935 NC_020307.1 4549258 4550196 D COG0583 Transcriptional regulator; DNA-binding transcriptional repressor LrhA 4549258..4550196 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474094.1 CDS CFSAN001992_21940 NC_020307.1 4550823 4551266 D COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH:ubiquinone oxidoreductase subunit A 4550823..4551266 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474095.1 CDS CFSAN001992_21945 NC_020307.1 4551282 4551944 D COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B 4551282..4551944 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474096.1 CDS CFSAN001992_21950 NC_020307.1 4552031 4553833 D COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 4552031..4553833 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474097.1 CDS CFSAN001992_21955 NC_020307.1 4553836 4554336 D COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; NADH dehydrogenase subunit E 4553836..4554336 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474098.1 CDS CFSAN001992_21960 NC_020307.1 4554333 4555670 D COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; NADH dehydrogenase I subunit F 4554333..4555670 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474099.1 CDS CFSAN001992_21965 NC_020307.1 4555701 4558427 D COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G 4555701..4558427 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474100.1 CDS CFSAN001992_21970 NC_020307.1 4558424 4559401 D COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH:ubiquinone oxidoreductase subunit H 4558424..4559401 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474101.1 CDS CFSAN001992_21975 NC_020307.1 4559416 4559958 D COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I 4559416..4559958 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474102.1 CDS CFSAN001992_21980 NC_020307.1 4559969 4560523 D COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH:ubiquinone oxidoreductase subunit J 4559969..4560523 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474103.1 CDS CFSAN001992_21985 NC_020307.1 4560520 4560822 D COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH:ubiquinone oxidoreductase subunit K 4560520..4560822 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474104.1 CDS CFSAN001992_21990 NC_020307.1 4560819 4562660 D COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH:ubiquinone oxidoreductase subunit L 4560819..4562660 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474105.1 CDS CFSAN001992_21995 NC_020307.1 4562737 4564266 D COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH:ubiquinone oxidoreductase subunit M 4562737..4564266 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474106.1 CDS CFSAN001992_22000 NC_020307.1 4564273 4565730 D COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH:ubiquinone oxidoreductase subunit N 4564273..4565730 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474107.1 CDS CFSAN001992_22005 NC_020307.1 4565871 4566875 R COG0835 Chemotaxis signal transduction protein; chemotaxis protein CheW complement(4565871..4566875) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474108.1 CDS CFSAN001992_22010 NC_020307.1 4566941 4567858 R COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III; ribonuclease Z complement(4566941..4567858) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474109.1 CDS CFSAN001992_22015 NC_020307.1 4567919 4568380 D COG2153 Predicted acyltransferase; acyltransferase 4567919..4568380 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474110.1 CDS CFSAN001992_22020 NC_020307.1 4568435 4568740 D COG4575 Uncharacterized conserved protein; hypothetical protein 4568435..4568740 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474111.1 CDS CFSAN001992_22025 NC_020307.1 4568842 4570137 D COG1169 Isochorismate synthase; menaquinone-specific isochorismate synthase 4568842..4570137 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474112.1 CDS CFSAN001992_22030 NC_020307.1 4570223 4571893 D COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 4570223..4571893 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474113.1 CDS CFSAN001992_22035 NC_020307.1 4571890 4572648 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 4571890..4572648 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474114.1 CDS CFSAN001992_22040 NC_020307.1 4572663 4573520 D COG0447 Dihydroxynaphthoic acid synthase; dihydroxynaphthoic acid synthetase 4572663..4573520 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474115.1 CDS CFSAN001992_22045 NC_020307.1 4573520 4574482 D COG1441 O-succinylbenzoate synthase; O-succinylbenzoate synthase 4573520..4574482 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474116.1 CDS CFSAN001992_22050 NC_020307.1 4574479 4575846 D COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II; O-succinylbenzoic acid--CoA ligase 4574479..4575846 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474117.1 CDS CFSAN001992_22055 NC_020307.1 4575944 4576201 D signal transduction protein PmrD 4575944..4576201 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474118.1 CDS CFSAN001992_22060 NC_020307.1 4576196 4576573 R 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF complement(4576196..4576573) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474119.1 CDS CFSAN001992_22065 NC_020307.1 4576573 4576908 R COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE complement(4576573..4576908) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474120.1 CDS arnT NC_020307.1 4576905 4578548 R COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family; 4-amino-4-deoxy-L-arabinose transferase complement(4576905..4578548) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474121.1 CDS CFSAN001992_22075 NC_020307.1 4578548 4579447 R COG0726 Predicted xylanase/chitin deacetylase; 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase ArnD complement(4578548..4579447) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474122.1 CDS CFSAN001992_22080 NC_020307.1 4579444 4581426 R COG0223 Methionyl-tRNA formyltransferase; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase complement(4579444..4581426) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474123.1 CDS CFSAN001992_22085 NC_020307.1 4581423 4582406 R COG0463 Glycosyltransferases involved in cell wall biogenesis; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase complement(4581423..4582406) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474124.1 CDS CFSAN001992_22090 NC_020307.1 4582409 4583548 R COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase complement(4582409..4583548) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474125.1 CDS CFSAN001992_22105 NC_020307.1 4584497 4584922 R COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; nucleoside triphosphatase NudI complement(4584497..4584922) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474126.1 CDS CFSAN001992_22110 NC_020307.1 4585201 4585743 D hypothetical protein 4585201..4585743 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474127.1 CDS CFSAN001992_22115 NC_020307.1 4585858 4587054 D COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; hypothetical protein 4585858..4587054 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474128.1 CDS CFSAN001992_22120 NC_020307.1 4587288 4588310 R deubiquitinase SseL complement(4587288..4588310) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474129.1 CDS glpC NC_020307.1 4588736 4589926 R COG0247 Fe-S oxidoreductase; sn-glycerol-3-phosphate dehydrogenase subunit C complement(4588736..4589926) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474130.1 CDS CFSAN001992_22130 NC_020307.1 4589923 4591182 R COG3075 Anaerobic glycerol-3-phosphate dehydrogenase; anaerobic glycerol-3-phosphate dehydrogenase subunit B complement(4589923..4591182) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474131.1 CDS glpA NC_020307.1 4591172 4592800 R COG0578 Glycerol-3-phosphate dehydrogenase; sn-glycerol-3-phosphate dehydrogenase subunit A complement(4591172..4592800) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474132.1 CDS glpT NC_020307.1 4593073 4594431 D COG2271 Sugar phosphate permease; sn-glycerol-3-phosphate transporter 4593073..4594431 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474133.1 CDS glpQ NC_020307.1 4594436 4595506 D COG0584 Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase 4594436..4595506 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474134.1 CDS CFSAN001992_22150 NC_020307.1 4595622 4596500 R COG0583 Transcriptional regulator; putative RuBisCO transcriptional regulator complement(4595622..4596500) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474135.1 CDS CFSAN001992_22155 NC_020307.1 4596661 4597851 D COG0477 Permeases of the major facilitator superfamily; Putative permease 4596661..4597851 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474136.1 CDS CFSAN001992_22160 NC_020307.1 4597853 4598107 R COG0633 Ferredoxin; 2Fe-2S ferredoxin YfaE complement(4597853..4598107) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474137.1 CDS nrdB NC_020307.1 4598107 4599237 R COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta complement(4598107..4599237) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474138.1 CDS CFSAN001992_22170 NC_020307.1 4599350 4601635 R COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha complement(4599350..4601635) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474139.1 CDS CFSAN001992_22175 NC_020307.1 4601992 4602720 R COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase; bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase complement(4601992..4602720) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474140.1 CDS CFSAN001992_22180 NC_020307.1 4602803 4603498 R COG1802 Transcriptional regulators; GntR family transcriptional regulator complement(4602803..4603498) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474141.1 CDS CFSAN001992_22185 NC_020307.1 4603737 4605062 D COG0477 Permeases of the major facilitator superfamily; transmembrane transpot protein 4603737..4605062 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474142.1 CDS CFSAN001992_22190 NC_020307.1 4605077 4606279 D COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; mandelate racemase 4605077..4606279 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474143.1 CDS CFSAN001992_22195 NC_020307.1 4606379 4606609 R COG0706 Preprotein translocase subunit YidC; hypothetical protein complement(4606379..4606609) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474144.1 CDS CFSAN001992_22200 NC_020307.1 4606689 4609325 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 4606689..4609325 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474145.1 CDS CFSAN001992_22205 NC_020307.1 4609443 4612289 D COG0642 Signal transduction histidine kinase; hybrid sensory kinase in two-component regulatory system with RcsB and YojN 4609443..4612289 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474146.1 CDS CFSAN001992_22210 NC_020307.1 4612393 4613043 R COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; transcriptional regulator RcsB complement(4612393..4613043) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474147.1 CDS CFSAN001992_22215 NC_020307.1 4613060 4615729 R COG0642 Signal transduction histidine kinase; phosphotransfer intermediate protein in two-component regulatory system with RcsBC complement(4613060..4615729) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474148.1 CDS CFSAN001992_22220 NC_020307.1 4616458 4617594 D COG3203 Outer membrane protein (porin); outer membrane porin protein C 4616458..4617594 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474149.1 CDS CFSAN001992_22225 NC_020307.1 4617709 4618761 D COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; thiamine biosynthesis lipoprotein ApbE 4617709..4618761 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474150.1 CDS CFSAN001992_22230 NC_020307.1 4618845 4619903 D COG2169 Adenosine deaminase; bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase 4618845..4619903 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474151.1 CDS CFSAN001992_22235 NC_020307.1 4619906 4620556 D COG3145 Alkylated DNA repair protein; alpha-ketoglutarate-dependent dioxygenase AlkB 4619906..4620556 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474152.1 CDS CFSAN001992_22240 NC_020307.1 4620632 4622275 D COG4615 ABC-type siderophore export system, fused ATPase and permease components; multidrug transporter membrane component/ATP-binding component 4620632..4622275 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474153.1 CDS CFSAN001992_22245 NC_020307.1 4622484 4622978 R COG4574 Serine protease inhibitor ecotin; ecotin complement(4622484..4622978) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474154.1 CDS CFSAN001992_22250 NC_020307.1 4623392 4623883 D COG1145 Ferredoxin; ferredoxin-type protein 4623392..4623883 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474155.1 CDS CFSAN001992_22255 NC_020307.1 4623873 4624136 D COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase; periplasmic nitrate reductase 4623873..4624136 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474156.1 CDS CFSAN001992_22260 NC_020307.1 4624133 4626619 D COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; nitrate reductase catalytic subunit 4624133..4626619 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474157.1 CDS napG NC_020307.1 4626626 4627321 D COG1145 Ferredoxin; quinol dehydrogenase periplasmic component 4626626..4627321 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474158.1 CDS napH NC_020307.1 4627308 4628177 D COG0348 Polyferredoxin; quinol dehydrogenase membrane component 4627308..4628177 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474159.1 CDS napB NC_020307.1 4628293 4628742 D COG3043 Nitrate reductase cytochrome c-type subunit; nitrate reductase cytochrome C550 subunit 4628293..4628742 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474160.1 CDS CFSAN001992_22280 NC_020307.1 4628752 4629354 D COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit; cytochrome c-type protein NapC 4628752..4629354 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474161.1 CDS CFSAN001992_22285 NC_020307.1 4629375 4629992 D COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component; cytochrome c biogenesis protein CcmA 4629375..4629992 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474162.1 CDS CFSAN001992_22290 NC_020307.1 4629989 4630648 D COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme ABC transporter membrane protein CcmB 4629989..4630648 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474163.1 CDS CFSAN001992_22295 NC_020307.1 4630700 4631437 D COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme ABC transporter membrane protein CcmC 4630700..4631437 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474164.1 CDS CFSAN001992_22300 NC_020307.1 4631434 4631646 D COG3114 Heme exporter protein D; cytochrome c biogenesis protein CcmD 4631434..4631646 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474165.1 CDS CFSAN001992_22305 NC_020307.1 4631643 4632122 D COG2332 Cytochrome c-type biogenesis protein CcmE; cytochrome C biogenesis protein CcmE 4631643..4632122 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474166.1 CDS CFSAN001992_22310 NC_020307.1 4632119 4633471 D COG1138 Cytochrome c biogenesis factor; overlaps another CDS with the same product name; heme lyase subunit CcmF 4632119..4633471 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474167.1 CDS CFSAN001992_22530 NC_020308.1 1 17094 R COG1192 ATPases involved in chromosome partitioning; plasmid partitioning protein ParA complement(join(17094,1..791)) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474168.1 CDS CFSAN001992_22535 NC_020308.1 1340 1564 D hypothetical protein 1340..1564 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474169.1 CDS CFSAN001992_22540 NC_020308.1 1634 2407 R hypothetical protein complement(1634..2407) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474170.1 CDS CFSAN001992_22545 NC_020308.1 2530 3477 R COG4823 Abortive infection bacteriophage resistance protein; hypothetical protein complement(2530..3477) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474171.1 CDS CFSAN001992_22550 NC_020308.1 3997 4629 D COG1961 Site-specific recombinases, DNA invertase Pin homologs; resolvase 3997..4629 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474172.1 CDS CFSAN001992_22555 NC_020308.1 4683 4883 D hypothetical protein 4683..4883 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474173.1 CDS CFSAN001992_22560 NC_020308.1 5103 5339 D hypothetical protein 5103..5339 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474174.1 CDS CFSAN001992_22565 NC_020308.1 5409 5681 R COG3316 Transposase and inactivated derivatives; transposase, IS6 family protein complement(5409..5681) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474175.1 CDS CFSAN001992_22570 NC_020308.1 5867 6844 R hypothetical protein complement(5867..6844) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474176.1 CDS CFSAN001992_22575 NC_020308.1 6993 7517 R putative fimbrial protein complement(6993..7517) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474177.1 CDS CFSAN001992_22580 NC_020308.1 7504 8205 R COG3121 P pilus assembly protein, chaperone PapD; fimbrial chaperone protein PefD complement(7504..8205) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474178.1 CDS CFSAN001992_22585 NC_020308.1 8198 10684 R COG3188 P pilus assembly protein, porin PapC; fimbrial outer membrane usher protein PefC complement(8198..10684) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474179.1 CDS CFSAN001992_22590 NC_020308.1 10809 11351 R fimbrial protein PefA complement(10809..11351) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474180.1 CDS CFSAN001992_22595 NC_020308.1 12279 12611 D COG3547 Transposase and inactivated derivatives; transposase 12279..12611 Salmonella enterica subsp. enterica serovar Javiana str. YP_007474181.1 CDS CFSAN001992_22600 NC_020308.1 13237 14028 R COG0582 Integrase; resolvase complement(13237..14028) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474182.1 CDS CFSAN001992_22605 NC_020308.1 14018 14344 R putative cytoplasmic protein complement(14018..14344) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474183.1 CDS CFSAN001992_22610 NC_020308.1 14346 14651 R plasmid maintenance protein CcdB complement(14346..14651) Salmonella enterica subsp. enterica serovar Javiana str. YP_007474184.1 CDS CFSAN001992_22615 NC_020308.1 14653 14871 R COG5302 Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid; plasmid maintenance protein CcdA complement(14653..14871) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22322 tRNA CFSAN001992_t22322 NC_020307.1 8746 8822 R tRNA-Pro complement(8746..8822) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22324 tRNA CFSAN001992_t22324 NC_020307.1 265294 265369 R tRNA-Asn complement(265294..265369) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22326 tRNA CFSAN001992_t22326 NC_020307.1 267126 267201 D tRNA-Asn 267126..267201 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22328 tRNA CFSAN001992_t22328 NC_020307.1 270558 270633 R tRNA-Asn complement(270558..270633) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22330 tRNA CFSAN001992_t22330 NC_020307.1 271234 271309 R tRNA-Asn complement(271234..271309) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22332 tRNA CFSAN001992_t22332 NC_020307.1 272296 272385 D tRNA-Ser 272296..272385 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22334 tRNA CFSAN001992_t22334 NC_020307.1 318169 318244 D tRNA-Gly 318169..318244 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22336 tRNA CFSAN001992_t22336 NC_020307.1 318297 318370 D tRNA-Cys 318297..318370 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22338 tRNA CFSAN001992_t22338 NC_020307.1 318382 318468 D tRNA-Leu 318382..318468 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22340 tRNA CFSAN001992_t22340 NC_020307.1 499827 499911 R tRNA-Tyr complement(499827..499911) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22342 tRNA CFSAN001992_t22342 NC_020307.1 499946 500030 R tRNA-Tyr complement(499946..500030) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22344 tRNA CFSAN001992_t22344 NC_020307.1 862389 862465 D tRNA-Val 862389..862465 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22346 tRNA CFSAN001992_t22346 NC_020307.1 862476 862552 D tRNA-Val 862476..862552 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22348 tRNA CFSAN001992_t22348 NC_020307.1 1018479 1018555 R tRNA-Arg complement(1018479..1018555) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22350 tRNA CFSAN001992_t22350 NC_020307.1 1030930 1031006 R tRNA-Arg complement(1030930..1031006) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22352 tRNA CFSAN001992_t22352 NC_020307.1 1147729 1147816 D tRNA-Ser 1147729..1147816 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22354 tRNA CFSAN001992_t22354 NC_020307.1 1241557 1241644 R tRNA-Ser complement(1241557..1241644) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22356 tRNA CFSAN001992_t22356 NC_020307.1 1339738 1339825 D tRNA-Ser 1339738..1339825 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22358 tRNA CFSAN001992_t22358 NC_020307.1 1492266 1492341 R tRNA-Lys complement(1492266..1492341) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22360 tRNA CFSAN001992_t22360 NC_020307.1 1492476 1492551 R tRNA-Lys complement(1492476..1492551) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22362 tRNA CFSAN001992_t22362 NC_020307.1 1492691 1492766 R tRNA-Lys complement(1492691..1492766) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22364 tRNA CFSAN001992_t22364 NC_020307.1 1492770 1492845 R tRNA-Val complement(1492770..1492845) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22366 tRNA CFSAN001992_t22366 NC_020307.1 1492983 1493058 R tRNA-Lys complement(1492983..1493058) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22368 tRNA CFSAN001992_t22368 NC_020307.1 1572953 1573029 D tRNA-Met 1572953..1573029 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22370 tRNA CFSAN001992_t22370 NC_020307.1 1573038 1573122 D tRNA-Leu 1573038..1573122 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22372 tRNA CFSAN001992_t22372 NC_020307.1 1573146 1573220 D tRNA-Gln 1573146..1573220 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22374 tRNA CFSAN001992_t22374 NC_020307.1 1573256 1573330 D tRNA-Gln 1573256..1573330 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22376 tRNA CFSAN001992_t22376 NC_020307.1 1573346 1573422 D tRNA-Met 1573346..1573422 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22378 tRNA CFSAN001992_t22378 NC_020307.1 1573469 1573543 D tRNA-Gln 1573469..1573543 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22380 tRNA CFSAN001992_t22380 NC_020307.1 1573587 1573661 D tRNA-Gln 1573587..1573661 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22382 tRNA CFSAN001992_t22382 NC_020307.1 1681237 1681313 R tRNA-Arg complement(1681237..1681313) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22384 tRNA CFSAN001992_t22384 NC_020307.1 1898060 1898135 R tRNA-Thr complement(1898060..1898135) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22386 tRNA CFSAN001992_t22386 NC_020307.1 1920556 1920632 R tRNA-Asp complement(1920556..1920632) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22388 tRNA CFSAN001992_t22388 NC_020307.1 1929996 1930072 R tRNA-Asp complement(1929996..1930072) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22390 tRNA CFSAN001992_t22390 NC_020307.1 1933533 1933608 R tRNA-Ala complement(1933533..1933608) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22392 tRNA CFSAN001992_t22392 NC_020307.1 1933720 1933796 R tRNA-Ile complement(1933720..1933796) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22394 tRNA CFSAN001992_t22394 NC_020307.1 2269902 2269988 D tRNA-Leu 2269902..2269988 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22396 tRNA CFSAN001992_t22396 NC_020307.1 2270016 2270102 D tRNA-Leu 2270016..2270102 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22398 tRNA CFSAN001992_t22398 NC_020307.1 2270134 2270220 D tRNA-Leu 2270134..2270220 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22400 tRNA CFSAN001992_t22400 NC_020307.1 2331736 2331820 R tRNA-Leu complement(2331736..2331820) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22402 tRNA CFSAN001992_t22402 NC_020307.1 2442653 2442728 R tRNA-Gly complement(2442653..2442728) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22404 tRNA CFSAN001992_t22404 NC_020307.1 2442884 2442959 R tRNA-Gly complement(2442884..2442959) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22406 tRNA CFSAN001992_t22406 NC_020307.1 2442997 2443072 R tRNA-Gly complement(2442997..2443072) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22408 tRNA CFSAN001992_t22408 NC_020307.1 2472464 2472539 D tRNA-Phe 2472464..2472539 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22410 tRNA CFSAN001992_t22410 NC_020307.1 2629402 2629477 R tRNA-Glu complement(2629402..2629477) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22412 tRNA CFSAN001992_t22412 NC_020307.1 2663972 2664047 R tRNA-Thr complement(2663972..2664047) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22414 tRNA CFSAN001992_t22414 NC_020307.1 2664054 2664128 R tRNA-Gly complement(2664054..2664128) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22416 tRNA CFSAN001992_t22416 NC_020307.1 2664245 2664329 R tRNA-Tyr complement(2664245..2664329) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22418 tRNA CFSAN001992_t22418 NC_020307.1 2664338 2664413 R tRNA-Thr complement(2664338..2664413) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22420 tRNA CFSAN001992_t22420 NC_020307.1 2671500 2671575 R tRNA-Ala complement(2671500..2671575) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22422 tRNA CFSAN001992_t22422 NC_020307.1 2671687 2671763 R tRNA-Ile complement(2671687..2671763) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22424 tRNA CFSAN001992_t22424 NC_020307.1 2824421 2824496 R tRNA-Ala complement(2824421..2824496) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22426 tRNA CFSAN001992_t22426 NC_020307.1 2824608 2824684 R tRNA-Ile complement(2824608..2824684) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22428 tRNA CFSAN001992_t22428 NC_020307.1 2882491 2882567 R tRNA-Pro complement(2882491..2882567) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22430 tRNA CFSAN001992_t22430 NC_020307.1 2882610 2882696 R tRNA-Leu complement(2882610..2882696) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22432 tRNA CFSAN001992_t22432 NC_020307.1 2882717 2882792 R tRNA-His complement(2882717..2882792) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22434 tRNA CFSAN001992_t22434 NC_020307.1 2882847 2882923 R tRNA-Arg complement(2882847..2882923) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22436 tRNA CFSAN001992_t22436 NC_020307.1 2921010 2921085 R tRNA-Trp complement(2921010..2921085) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22438 tRNA CFSAN001992_t22438 NC_020307.1 2921094 2921170 R tRNA-Asp complement(2921094..2921170) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22440 tRNA CFSAN001992_t22440 NC_020307.1 2924533 2924608 R tRNA-Glu complement(2924533..2924608) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22442 tRNA CFSAN001992_t22442 NC_020307.1 3072947 3073041 R tRNA-Sec complement(3072947..3073041) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22444 tRNA CFSAN001992_t22444 NC_020307.1 3195135 3195211 D tRNA-Pro 3195135..3195211 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22446 tRNA CFSAN001992_t22446 NC_020307.1 3431272 3431347 D tRNA-Glu 3431272..3431347 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22448 tRNA CFSAN001992_t22448 NC_020307.1 3434770 3434845 D tRNA-Thr 3434770..3434845 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22450 tRNA CFSAN001992_t22450 NC_020307.1 3539825 3539911 D tRNA-Leu 3539825..3539911 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22452 tRNA CFSAN001992_t22452 NC_020307.1 3541796 3541872 D tRNA-Met 3541796..3541872 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22454 tRNA CFSAN001992_t22454 NC_020307.1 3619724 3619799 R tRNA-Met complement(3619724..3619799) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22456 tRNA CFSAN001992_t22456 NC_020307.1 3729034 3729109 R tRNA-Phe complement(3729034..3729109) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22458 tRNA CFSAN001992_t22458 NC_020307.1 3805232 3805305 D tRNA-Gly 3805232..3805305 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22460 tRNA CFSAN001992_t22460 NC_020307.1 3859729 3859805 R tRNA-Met complement(3859729..3859805) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22462 tRNA CFSAN001992_t22462 NC_020307.1 3859835 3859911 R tRNA-Met complement(3859835..3859911) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22464 tRNA CFSAN001992_t22464 NC_020307.1 4019874 4019966 D tRNA-Ser 4019874..4019966 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22466 tRNA CFSAN001992_t22466 NC_020307.1 4019970 4020046 D tRNA-Arg 4019970..4020046 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22468 tRNA CFSAN001992_t22468 NC_020307.1 4020108 4020184 D tRNA-Arg 4020108..4020184 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22470 tRNA CFSAN001992_t22470 NC_020307.1 4020247 4020323 D tRNA-Arg 4020247..4020323 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22472 tRNA CFSAN001992_t22472 NC_020307.1 4020516 4020592 D tRNA-Arg 4020516..4020592 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22474 tRNA CFSAN001992_t22474 NC_020307.1 4199803 4199878 D tRNA-Glu 4199803..4199878 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22476 tRNA CFSAN001992_t22476 NC_020307.1 4452030 4452105 R tRNA-Lys complement(4452030..4452105) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22478 tRNA CFSAN001992_t22478 NC_020307.1 4452110 4452185 R tRNA-Val complement(4452110..4452185) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22480 tRNA CFSAN001992_t22480 NC_020307.1 4452227 4452302 R tRNA-Val complement(4452227..4452302) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22482 tRNA CFSAN001992_t22482 NC_020307.1 4452348 4452423 R tRNA-Val complement(4452348..4452423) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22484 tRNA CFSAN001992_t22484 NC_020307.1 4455129 4455204 D tRNA-Ala 4455129..4455204 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22486 tRNA CFSAN001992_t22486 NC_020307.1 4455247 4455322 D tRNA-Ala 4455247..4455322 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_t22488 tRNA CFSAN001992_t22488 NC_020307.1 4485707 4485781 R tRNA-Arg complement(4485707..4485781) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22490 rRNA CFSAN001992_r22490 NC_020307.1 1930126 1930241 R 5S ribosomal RNA complement(1930126..1930241) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22520 rRNA CFSAN001992_r22520 NC_020307.1 1930443 1933350 R 23S ribosomal RNA complement(1930443..1933350) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22506 rRNA CFSAN001992_r22506 NC_020307.1 1933856 1935406 R 16S ribosomal RNA complement(1933856..1935406) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22492 rRNA CFSAN001992_r22492 NC_020307.1 2626093 2626208 R 5S ribosomal RNA complement(2626093..2626208) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22522 rRNA CFSAN001992_r22522 NC_020307.1 2626301 2629208 R 23S ribosomal RNA complement(2626301..2629208) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22508 rRNA CFSAN001992_r22508 NC_020307.1 2629553 2631104 R 16S ribosomal RNA complement(2629553..2631104) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22494 rRNA CFSAN001992_r22494 NC_020307.1 2668203 2668318 R 5S ribosomal RNA complement(2668203..2668318) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22524 rRNA CFSAN001992_r22524 NC_020307.1 2668410 2671317 R 23S ribosomal RNA complement(2668410..2671317) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22510 rRNA CFSAN001992_r22510 NC_020307.1 2671823 2673374 R 16S ribosomal RNA complement(2671823..2673374) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22496 rRNA CFSAN001992_r22496 NC_020307.1 2821023 2821138 R 5S ribosomal RNA complement(2821023..2821138) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22512 rRNA CFSAN001992_r22512 NC_020307.1 2824744 2826295 R 16S ribosomal RNA complement(2824744..2826295) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22498 rRNA CFSAN001992_r22498 NC_020307.1 2921224 2921339 R 5S ribosomal RNA complement(2921224..2921339) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22526 rRNA CFSAN001992_r22526 NC_020307.1 2921432 2924339 R 23S ribosomal RNA complement(2921432..2924339) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22514 rRNA CFSAN001992_r22514 NC_020307.1 2924684 2926235 R 16S ribosomal RNA complement(2924684..2926235) Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22516 rRNA CFSAN001992_r22516 NC_020307.1 3429645 3431196 D 16S ribosomal RNA 3429645..3431196 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22528 rRNA CFSAN001992_r22528 NC_020307.1 3431541 3434448 D 23S ribosomal RNA 3431541..3434448 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22500 rRNA CFSAN001992_r22500 NC_020307.1 3434640 3434755 D 5S ribosomal RNA 3434640..3434755 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22502 rRNA CFSAN001992_r22502 NC_020307.1 3434885 3435000 D 5S ribosomal RNA 3434885..3435000 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22518 rRNA CFSAN001992_r22518 NC_020307.1 4198176 4199727 D 16S ribosomal RNA 4198176..4199727 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22530 rRNA CFSAN001992_r22530 NC_020307.1 4200072 4202979 D 23S ribosomal RNA 4200072..4202979 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992_r22504 rRNA CFSAN001992_r22504 NC_020307.1 4203170 4203285 D 5S ribosomal RNA 4203170..4203285 Salmonella enterica subsp. enterica serovar Javiana str.