-- dump date 20140620_035233 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_004044689.1 313205512 10002783 16..1494 1 NC_014738.1 COGs: COG0593 ATPase involved in DNA replication initiation; InterPro IPR001957: IPR013317: IPR013159: IPR003593: IPR 020591: IPR018312; KEGG: fba:FIC_00536 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; SPTR: Chromosomal replication initiator protein dnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosomal replication initiator protein dnaa 1494 10002783 Riean_0001 Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosomal replication initiator protein dnaa YP_004044689.1 16 D 693978 CDS YP_004044690.1 313205513 10000732 1588..2034 1 NC_014738.1 COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867: IPR000106; KEGG: zpr:ZPR_3591 low molecular weight phosphotyrosine protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein tyrosine phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 2034 10000732 Riean_0002 Riemerella anatipestifer ATCC 11845 = DSM 15868 protein tyrosine phosphatase YP_004044690.1 1588 D 693978 CDS YP_004044691.1 313205514 10000733 2034..2738 1 NC_014738.1 COGs: COG0313 methyltransferase; InterPro IPR000878; KEGG: fba:FIC_00538 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase 2738 10000733 Riean_0003 Riemerella anatipestifer ATCC 11845 = DSM 15868 uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase YP_004044691.1 2034 D 693978 CDS YP_004044692.1 313205515 10000734 complement(2744..3178) 1 NC_014738.1 COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: fba:FIC_00502 rrf2 family protein (transcriptional regulator); PFAM: protein of unknown function UPF0074; SPTR: Rrf2 family protein (Putative transcriptional regulator); TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (transcriptional regulator); transcriptional regulator, badm/rrf2 family 3178 10000734 Riean_0004 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, badm/rrf2 family YP_004044692.1 2744 R 693978 CDS YP_004044693.1 313205516 10000735 complement(3190..3567) 1 NC_014738.1 KEGG: fba:FIC_00501 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3567 10000735 Riean_0005 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044693.1 3190 R 693978 CDS YP_004044694.1 313205517 10000736 complement(3626..4096) 1 NC_014738.1 COGs: COG1522 Transcriptional regulators; InterPro IPR019887: IPR019888: IPR000485: IPR019885; KEGG: fba:FIC_00500 probable transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; SPTR: Probable transcriptional regulator; PFAM: HTH domain; AsnC family; ArsR family transcriptional regulator 4096 10000736 Riean_0006 Riemerella anatipestifer ATCC 11845 = DSM 15868 ArsR family transcriptional regulator YP_004044694.1 3626 R 693978 CDS YP_004044695.1 313205518 10000737 complement(4227..8945) 1 NC_014738.1 COGs: COG2911 conserved hypothetical protein; KEGG: fba:FIC_00499 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 8945 10000737 Riean_0007 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044695.1 4227 R 693978 CDS YP_004044696.1 313205519 10000738 8950..9975 1 NC_014738.1 COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR000905: IPR017861; KEGG: fba:FIC_00498 probable O-sialoglycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Probable O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: Glycoprotease family; TIGRFAM: glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; o-sialoglycoprotein endopeptidase 9975 10000738 Riean_0008 Riemerella anatipestifer ATCC 11845 = DSM 15868 o-sialoglycoprotein endopeptidase YP_004044696.1 8950 D 693978 CDS YP_004044697.1 313205520 10000739 9987..10682 1 NC_014738.1 COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: fba:FIC_00497 ribosomal RNA small subunit methyltransferase E; PFAM: protein of unknown function DUF558; SPTR: Protein of hypothetical function DUF558; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; hypothetical protein 10682 10000739 Riean_0009 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044697.1 9987 D 693978 CDS YP_004044698.1 313205521 10000740 complement(10722..11534) 1 NC_014738.1 COGs: COG1968 Uncharacterized bacitracin resistance protein; InterPro IPR003824; KEGG: fba:FIC_00937 undecaprenyl-diphosphatase; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; undecaprenyl-diphosphatase 11534 10000740 Riean_0010 Riemerella anatipestifer ATCC 11845 = DSM 15868 undecaprenyl-diphosphatase YP_004044698.1 10722 R 693978 CDS YP_004044699.1 313205522 10000741 complement(11610..11870) 1 NC_014738.1 KEGG: fba:FIC_00936 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3098); hypothetical protein 11870 10000741 Riean_0011 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044699.1 11610 R 693978 CDS YP_004044700.1 313205523 10000742 complement(11874..12773) 1 NC_014738.1 COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: fba:FIC_00935 cell division protein FtsX; PFAM: protein of unknown function DUF214; SPTR: Probable cell division protein; PFAM: Predicted permease; cell division protein ftsx 12773 10000742 Riean_0012 Riemerella anatipestifer ATCC 11845 = DSM 15868 cell division protein ftsx YP_004044700.1 11874 R 693978 CDS YP_004044701.1 313205524 10000743 12874..13662 1 NC_014738.1 COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); InterPro IPR011530: IPR001737: IPR020598; KEGG: fba:FIC_00934 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: Ribosomal RNA small subunit methyltransferase A; TIGRFAM: dimethyladenosine transferase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; dimethyladenosine transferase 13662 10000743 Riean_0013 Riemerella anatipestifer ATCC 11845 = DSM 15868 dimethyladenosine transferase YP_004044701.1 12874 D 693978 CDS YP_004044702.1 313205525 10000744 13682..15031 1 NC_014738.1 COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR006668: IPR000644: IPR006667: IPR006669; KEGG: coc:Coch_1980 magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE); magnesium transporter 15031 10000744 Riean_0014 Riemerella anatipestifer ATCC 11845 = DSM 15868 magnesium transporter YP_004044702.1 13682 D 693978 CDS YP_004044703.1 313205526 10000745 15118..15576 1 NC_014738.1 KEGG: nam:NAMH_0210 exonuclease; SPTR: Putative uncharacterized protein; hypothetical protein 15576 10000745 Riean_0015 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044703.1 15118 D 693978 CDS YP_004044704.1 313205527 10000746 15817..16311 1 NC_014738.1 KEGG: cat:CA2559_10813 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 16311 10000746 Riean_0016 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044704.1 15817 D 693978 CDS YP_004044705.1 313205528 10000747 16477..17037 1 NC_014738.1 KEGG: fba:FIC_00283 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 17037 10000747 Riean_0017 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044705.1 16477 D 693978 CDS YP_004044706.1 313205529 10000748 17067..17633 1 NC_014738.1 COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: fjo:Fjoh_2530 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Isochorismatase; PFAM: Isochorismatase family; isochorismatase hydrolase 17633 10000748 Riean_0018 Riemerella anatipestifer ATCC 11845 = DSM 15868 isochorismatase hydrolase YP_004044706.1 17067 D 693978 CDS YP_004044707.1 313205530 10000749 17652..18959 1 NC_014738.1 KEGG: chu:CHU_0622 hypothetical protein; SPTR: Possible glycosyl hydrolase, BNR protein; PFAM: IPT/TIG domain; hypothetical protein 18959 10000749 Riean_0019 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044707.1 17652 D 693978 CDS YP_004044708.1 313205531 10000750 19060..19746 1 NC_014738.1 COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: fba:FIC_01325 NAD-dependent protein deacetylase of SIR2 family; PFAM: Silent information regulator protein Sir2; SPTR: NAD-dependent protein deacetylase of SIR2 family; PFAM: Sir2 family; silent information regulator protein sir2 19746 10000750 Riean_0020 Riemerella anatipestifer ATCC 11845 = DSM 15868 silent information regulator protein sir2 YP_004044708.1 19060 D 693978 CDS YP_004044709.1 313205532 10000751 complement(19743..20396) 1 NC_014738.1 COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367; KEGG: fba:FIC_02393 Mn-dependent transcriptional regulator MntR; PFAM: iron dependent repressor; SMART: iron dependent repressor; SPTR: Transcriptional regulatory protein; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; iron (metal) dependent repressor, dtxr family 20396 10000751 Riean_0021 Riemerella anatipestifer ATCC 11845 = DSM 15868 iron (metal) dependent repressor, dtxr family YP_004044709.1 19743 R 693978 CDS YP_004044710.1 313205533 10000752 complement(20441..21349) 1 NC_014738.1 COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523; KEGG: fba:FIC_01370 magnesium and cobalt transport protein; PFAM: Mg2 transporter protein CorA family protein; SPTR: CorA family Mg2+ transporter protein; PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); mg2 transporter protein cora family protein 21349 10000752 Riean_0022 Riemerella anatipestifer ATCC 11845 = DSM 15868 mg2 transporter protein cora family protein YP_004044710.1 20441 R 693978 CDS YP_004044711.1 313205534 10000753 complement(21423..22310) 1 NC_014738.1 COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220: IPR005263; KEGG: fba:FIC_00473 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 22310 10000753 Riean_0023 Riemerella anatipestifer ATCC 11845 = DSM 15868 dihydrodipicolinate synthase YP_004044711.1 21423 R 693978 CDS YP_004044712.1 313205535 10000754 22582..25305 1 NC_014738.1 InterPro IPR012910: IPR000531: IPR018247: IPR010917; KEGG: fba:FIC_00541 SusC, outer membrane protein involved in starch binding; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent outer membrane receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor plug 25305 10000754 Riean_0024 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004044712.1 22582 D 693978 CDS YP_004044713.1 313205536 10000755 25338..26930 1 NC_014738.1 InterPro IPR012944; KEGG: cpi:Cpin_5091 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: Outer membrane protein; PFAM: SusD family; ragb/susd domain-containing protein 26930 10000755 Riean_0025 Riemerella anatipestifer ATCC 11845 = DSM 15868 ragb/susd domain-containing protein YP_004044713.1 25338 D 693978 CDS YP_004044714.1 313205537 10000756 27012..29159 1 NC_014738.1 InterPro IPR019563; KEGG: fba:FIC_00545 alpha-glucosidase; PFAM: Glycoside hydrolase 97; SPTR: Alpha-glucosidase; PFAM: Glycoside hydrolase 97; glycoside hydrolase 97 29159 10000756 Riean_0026 Riemerella anatipestifer ATCC 11845 = DSM 15868 glycoside hydrolase 97 YP_004044714.1 27012 D 693978 CDS YP_004044715.1 313205538 10000757 29331..32570 1 NC_014738.1 COGs: COG0793 Periplasmic protease; InterPro IPR011659: IPR005151: IPR012393; KEGG: bfs:BF0080 peptidase/protease family protein; PFAM: peptidase S41; WD40-like beta Propeller containing protein; SPTR: Putative peptidase/protease family protein; PFAM: WD40-like Beta Propeller Repeat; Peptidase family S41; peptidase s41 32570 10000757 Riean_0027 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase s41 YP_004044715.1 29331 D 693978 CDS YP_004044716.1 313205539 10000758 complement(32644..32769) 1 NC_014738.1 hypothetical protein 32769 10000758 Riean_0028 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044716.1 32644 R 693978 CDS YP_004044717.1 313205540 10000759 complement(32771..33649) 1 NC_014738.1 InterPro IPR002559; KEGG: cth:Cthe_2323 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Transposase; PFAM: Transposase DDE domain; transposase is4 family protein 33649 10000759 Riean_0029 Riemerella anatipestifer ATCC 11845 = DSM 15868 transposase is4 family protein YP_004044717.1 32771 R 693978 CDS YP_004044718.1 313205541 10000760 33760..35079 1 NC_014738.1 KEGG: pmx:PERMA_1280 phosphate-selective porin O and P superfamily protein; SPTR: Phosphate-selective porin O and P superfamily protein; phosphate-selective porin o and p superfamily protein 35079 10000760 Riean_0030 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphate-selective porin o and p superfamily protein YP_004044718.1 33760 D 693978 CDS YP_004044719.1 313205542 10000761 35144..35401 1 NC_014738.1 KEGG: fba:FIC_01614 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 35401 10000761 Riean_0031 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044719.1 35144 D 693978 CDS YP_004044720.1 313205543 10000764 36198..37106 1 NC_014738.1 COGs: COG3781 membrane protein; KEGG: chu:CHU_1817 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bestrophin; hypothetical protein 37106 10000764 Riean_0034 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044720.1 36198 D 693978 CDS YP_004044721.1 313205544 10000765 37118..37414 1 NC_014738.1 KEGG: fba:FIC_01614 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 37414 10000765 Riean_0035 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044721.1 37118 D 693978 CDS YP_004044722.1 313205545 10000766 complement(37411..39441) 1 NC_014738.1 COGs: COG4389 Site-specific recombinase; InterPro IPR011385; KEGG: fba:FIC_01615 probable site-specific recombinase; PFAM: site-specific recombinase Gcr; SPTR: Probable site-specific recombinase; PFAM: Site-specific recombinase; site-specific recombinase gcr 39441 10000766 Riean_0036 Riemerella anatipestifer ATCC 11845 = DSM 15868 site-specific recombinase gcr YP_004044722.1 37411 R 693978 CDS YP_004044723.1 313205546 10000767 complement(39447..40091) 1 NC_014738.1 COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001264: IPR011812; KEGG: fba:FIC_01616 monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; SPTR: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; monofunctional biosynthetic peptidoglycan transglycosylase 40091 10000767 Riean_0037 Riemerella anatipestifer ATCC 11845 = DSM 15868 monofunctional biosynthetic peptidoglycan transglycosylase YP_004044723.1 39447 R 693978 CDS YP_004044724.1 313205547 10000768 complement(40280..41485) 1 NC_014738.1 COGs: COG1408 phosphohydrolase; InterPro IPR004843: IPR006311; KEGG: fba:FIC_00511 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Putative membrane protein; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 41485 10000768 Riean_0038 Riemerella anatipestifer ATCC 11845 = DSM 15868 metallophosphoesterase YP_004044724.1 40280 R 693978 CDS YP_004044725.1 313205548 10000770 complement(42357..42896) 1 NC_014738.1 InterPro IPR002110: IPR020683; KEGG: sli:Slin_0458 ankyrin; PFAM: Ankyrin; SMART: Ankyrin; SPTR: Ankyrin repeat protein; PFAM: Ankyrin repeat; ankyrin 42896 10000770 Riean_0040 Riemerella anatipestifer ATCC 11845 = DSM 15868 ankyrin YP_004044725.1 42357 R 693978 CDS YP_004044726.1 313205549 10000771 complement(42986..44515) 1 NC_014738.1 COGs: COG0753 Catalase; InterPro IPR018028: IPR010582: IPR011614: IPR002226; KEGG: bpu:BPUM_0892 catalase KatX2; PFAM: Catalase related subgroup; Catalase domain protein; PRIAM: Catalase; SPTR: Catalase; PFAM: Catalase; Catalase-related immune-responsive; catalase 44515 10000771 Riean_0041 Riemerella anatipestifer ATCC 11845 = DSM 15868 catalase YP_004044726.1 42986 R 693978 CDS YP_004044727.1 313205550 10000772 44647..45525 1 NC_014738.1 InterPro IPR002559; KEGG: cth:Cthe_2323 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Transposase; PFAM: Transposase DDE domain; transposase is4 family protein 45525 10000772 Riean_0042 Riemerella anatipestifer ATCC 11845 = DSM 15868 transposase is4 family protein YP_004044727.1 44647 D 693978 CDS YP_004044728.1 313205551 10000776 49973..51421 1 NC_014738.1 KEGG: cpi:Cpin_6565 RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family; hypothetical protein 51421 10000776 Riean_0046 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044728.1 49973 D 693978 CDS YP_004044729.1 313205552 10000777 51489..51986 1 NC_014738.1 KEGG: bfo:BRAFLDRAFT_91397 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 51986 10000777 Riean_0047 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044729.1 51489 D 693978 CDS YP_004044730.1 313205553 10000778 52442..53035 1 NC_014738.1 KEGG: pfh:PFHG_02267 conserved hypothetical protein; SPTR: Predicted protein; hypothetical protein 53035 10000778 Riean_0048 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044730.1 52442 D 693978 CDS YP_004044731.1 313205554 10000779 53068..53256 1 NC_014738.1 KEGG: nda:Ndas_1670 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 53256 10000779 Riean_0049 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044731.1 53068 D 693978 CDS YP_004044732.1 313205555 10000780 53319..54050 1 NC_014738.1 InterPro IPR019115; KEGG: zpr:ZPR_4163 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 54050 10000780 Riean_0050 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044732.1 53319 D 693978 CDS YP_004044733.1 313205556 10000781 complement(54072..54197) 1 NC_014738.1 manually curated; hypothetical protein 54197 10000781 Riean_0051 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044733.1 54072 R 693978 CDS YP_004044734.1 313205557 10000783 complement(54973..55737) 1 NC_014738.1 KEGG: fba:FIC_00515 PorT protein; SPTR: PorT protein; port protein 55737 10000783 Riean_0053 Riemerella anatipestifer ATCC 11845 = DSM 15868 port protein YP_004044734.1 54973 R 693978 CDS YP_004044735.1 313205558 10000784 complement(55782..56504) 1 NC_014738.1 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004033; KEGG: fba:FIC_00514 ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; demethylmenaquinone methyltransferase 56504 10000784 Riean_0054 Riemerella anatipestifer ATCC 11845 = DSM 15868 demethylmenaquinone methyltransferase YP_004044735.1 55782 R 693978 CDS YP_004044736.1 313205559 10000785 complement(56517..57086) 1 NC_014738.1 KEGG: fba:FIC_00513 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 57086 10000785 Riean_0055 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044736.1 56517 R 693978 CDS YP_004044737.1 313205560 10000786 57231..58298 1 NC_014738.1 COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013751: IPR013747; KEGG: fba:FIC_00512 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; beta-ketoacyl-acyl-carrier-protein synthase iii 58298 10000786 Riean_0056 Riemerella anatipestifer ATCC 11845 = DSM 15868 beta-ketoacyl-acyl-carrier-protein synthase iii YP_004044737.1 57231 D 693978 CDS YP_004044738.1 313205561 10000787 58311..58655 1 NC_014738.1 COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: fba:FIC_01173 hypothetical protein; PFAM: membrane protein of unknown function; SPTR: Putative membrane protein; PFAM: Membrane protein of unknown function; hypothetical protein 58655 10000787 Riean_0057 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044738.1 58311 D 693978 CDS YP_004044739.1 313205562 10000788 complement(58663..59949) 1 NC_014738.1 InterPro IPR019026; KEGG: coc:Coch_0070 hypothetical protein; PFAM: Peptidase M64, IgA; SPTR: Putative uncharacterized protein; PFAM: IgA Peptidase M64; peptidase m64, iga 59949 10000788 Riean_0058 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m64, iga YP_004044739.1 58663 R 693978 CDS YP_004044740.1 313205563 10000789 60073..61164 1 NC_014738.1 COGs: COG0012 GTPase probable translation factor; InterPro IPR002917: IPR013029: IPR004396: IPR006073; KEGG: fba:FIC_01269 GTP-binding and nucleic aciD-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related; SPTR: GTP-binding protein; TIGRFAM: GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding protein ychf 61164 10000789 Riean_0059 Riemerella anatipestifer ATCC 11845 = DSM 15868 GTP-binding protein ychf YP_004044740.1 60073 D 693978 CDS YP_004044741.1 313205564 10000790 complement(61241..61894) 1 NC_014738.1 COGs: COG0176 Transaldolase; InterPro IPR001585: IPR004731: IPR018225; KEGG: fba:FIC_01004 translaldolase; PFAM: Transaldolase; SPTR: Transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; transaldolase 61894 10000790 Riean_0060 Riemerella anatipestifer ATCC 11845 = DSM 15868 transaldolase YP_004044741.1 61241 R 693978 CDS YP_004044742.1 313205565 10000791 62019..62837 1 NC_014738.1 COGs: COG0623 Enoyl-(acyl-carrier-protein); KEGG: fba:FIC_02396 enoyl-[acyl-carrier-protein] reductase (NADH); PRIAM: Enoyl-[acyl-carrier-protein] reductase (NADH); SPTR: Enoyl-[acyl-carrier-protein] reductase (NADH); PFAM: short chain dehydrogenase; enoyl-ACP reductase 62837 10000791 Riean_0061 Riemerella anatipestifer ATCC 11845 = DSM 15868 enoyl-ACP reductase YP_004044742.1 62019 D 693978 CDS YP_004044743.1 313205566 10000792 62925..64007 1 NC_014738.1 COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130: IPR001179; KEGG: fba:FIC_01349 probable peptidyl-prolyl cis-trans isomerase; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; peptidylprolyl isomerase FKBP-type; PRIAM: Peptidylprolyl isomerase; SPTR: Cyclophilin/FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl isomerase 64007 10000792 Riean_0062 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidyl-prolyl isomerase YP_004044743.1 62925 D 693978 CDS YP_004044744.1 313205567 10000793 64228..64677 1 NC_014738.1 InterPro IPR000835; KEGG: fba:FIC_00947 regulatory protein, MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: MarR family transcriptional regulator; PFAM: MarR family; regulatory protein marr 64677 10000793 Riean_0063 Riemerella anatipestifer ATCC 11845 = DSM 15868 regulatory protein marr YP_004044744.1 64228 D 693978 CDS YP_004044745.1 313205568 10000794 64701..67106 1 NC_014738.1 COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176: IPR006108: IPR001753: IPR001412; KEGG: fba:FIC_00946 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase (isoleucine degradation); PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; SPTR: 3-hydroxyacyl-CoA dehydrogenase; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; 3-hydroxyacyl-CoA dehydrogenase naD-binding protein 67106 10000794 Riean_0064 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-hydroxyacyl-CoA dehydrogenase naD-binding protein YP_004044745.1 64701 D 693978 CDS YP_004044746.1 313205569 10000795 67175..68353 1 NC_014738.1 COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR020616: IPR020617: IPR002155: IPR020615: IPR 020610: IPR020613; KEGG: fba:FIC_00944 3-ketoacyl-CoA thiolase; PFAM: Thiolase-like; SPTR: Acetyl-CoA C-acyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; acetyl-CoA acetyltransferase 68353 10000795 Riean_0065 Riemerella anatipestifer ATCC 11845 = DSM 15868 acetyl-CoA acetyltransferase YP_004044746.1 67175 D 693978 CDS YP_004044747.1 313205570 10000796 68405..70183 1 NC_014738.1 COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090: IPR006089; KEGG: fba:FIC_00942 acyl-CoA dehydrogenase, short-chain specific; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; acyl-CoA dehydrogenase domain-containing protein 70183 10000796 Riean_0066 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyl-CoA dehydrogenase domain-containing protein YP_004044747.1 68405 D 693978 CDS YP_004044748.1 313205571 10000797 complement(71048..71248) 1 NC_014738.1 KEGG: pfh:PFHG_02301 conserved hypothetical protein; hypothetical protein 71248 10000797 Riean_0067 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044748.1 71048 R 693978 CDS YP_004044749.1 313205572 10000798 71297..72064 1 NC_014738.1 KEGG: nis:NIS_1393 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 72064 10000798 Riean_0068 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044749.1 71297 D 693978 CDS YP_004044750.1 313205573 10000799 72068..72649 1 NC_014738.1 KEGG: sde:Sde_2308 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 72649 10000799 Riean_0069 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044750.1 72068 D 693978 CDS YP_004044751.1 313205574 10000800 72810..73478 1 NC_014738.1 KEGG: sna:Snas_6193 glycoside hydrolase family 43; SPTR: Hypothetical membrane protein; hypothetical protein 73478 10000800 Riean_0070 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044751.1 72810 D 693978 CDS YP_004044752.1 313205575 10000801 complement(73515..74285) 1 NC_014738.1 InterPro IPR014127; KEGG: fba:FIC_00932 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2400); TIGRFAM: conserved hypothetical protein TIGR02757; hypothetical protein 74285 10000801 Riean_0071 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044752.1 73515 R 693978 CDS YP_004044753.1 313205576 10000802 complement(74285..75199) 1 NC_014738.1 COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; InterPro IPR013471; KEGG: fba:FIC_00931 ribonuclease Z; SPTR: Ribonuclease Z; TIGRFAM: ribonuclease Z; PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z; rnase z 75199 10000802 Riean_0072 Riemerella anatipestifer ATCC 11845 = DSM 15868 rnase z YP_004044753.1 74285 R 693978 CDS YP_004044754.1 313205577 10000803 complement(75213..75788) 1 NC_014738.1 COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR020922: IPR002637; KEGG: fba:FIC_01566 nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific); PFAM: Ham1 family protein; SPTR: Nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; non-canonical purine ntp pyrophosphatase, rdgb/ham1 family 75788 10000803 Riean_0073 Riemerella anatipestifer ATCC 11845 = DSM 15868 non-canonical purine ntp pyrophosphatase, rdgb/ham1 family YP_004044754.1 75213 R 693978 CDS YP_004044755.1 313205578 10000804 complement(75803..76615) 1 NC_014738.1 InterPro IPR003675; KEGG: fba:FIC_01567 CAAX amino terminal protease family protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease family protein; PFAM: CAAX amino terminal protease family; abortive infection protein 76615 10000804 Riean_0074 Riemerella anatipestifer ATCC 11845 = DSM 15868 abortive infection protein YP_004044755.1 75803 R 693978 CDS YP_004044756.1 313205579 10000805 76778..77791 1 NC_014738.1 KEGG: fba:FIC_00728 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 77791 10000805 Riean_0075 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044756.1 76778 D 693978 CDS YP_004044757.1 313205580 10000806 77827..78402 1 NC_014738.1 COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836: IPR005904; KEGG: fba:FIC_00746 hypoxanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: Hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 78402 10000806 Riean_0076 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypoxanthine phosphoribosyltransferase YP_004044757.1 77827 D 693978 CDS YP_004044758.1 313205581 10000807 78471..79052 1 NC_014738.1 COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR000850; KEGG: fba:FIC_00745 adenylate kinase; PFAM: adenylate kinase; SPTR: Adenylate kinase; PFAM: Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase 79052 10000807 Riean_0077 Riemerella anatipestifer ATCC 11845 = DSM 15868 adenylate kinase YP_004044758.1 78471 D 693978 CDS YP_004044759.1 313205582 10000808 79151..80134 1 NC_014738.1 COGs: COG0536 GTPase; InterPro IPR006169: IPR002917: IPR014100: IPR005225: IPR 006073: IPR006074; KEGG: fba:FIC_00744 GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; SPTR: GTP-binding protein; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; small GTP-binding protein domain; GTP-binding protein obg/cgta 80134 10000808 Riean_0078 Riemerella anatipestifer ATCC 11845 = DSM 15868 GTP-binding protein obg/cgta YP_004044759.1 79151 D 693978 CDS YP_004044760.1 313205583 10000809 complement(80157..80924) 1 NC_014738.1 COGs: COG0084 Mg-dependent DNase; InterPro IPR001130: IPR012278: IPR015991; KEGG: fba:FIC_00739 deoxyribonuclease YcfH; PFAM: TatD-related deoxyribonuclease; SPTR: TatD family deoxyribonuclease; TIGRFAM: hydrolase, TatD family; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; hydrolase, tatd family 80924 10000809 Riean_0079 Riemerella anatipestifer ATCC 11845 = DSM 15868 hydrolase, tatd family YP_004044760.1 80157 R 693978 CDS YP_004044761.1 313205584 10000810 complement(80938..81897) 1 NC_014738.1 InterPro IPR014982; KEGG: fba:FIC_00737 hypothetical protein; PFAM: GSCFA domain protein; SPTR: Putative uncharacterized protein; PFAM: GSCFA family; gscfa domain-containing protein 81897 10000810 Riean_0080 Riemerella anatipestifer ATCC 11845 = DSM 15868 gscfa domain-containing protein YP_004044761.1 80938 R 693978 CDS YP_004044762.1 313205585 10000811 complement(81910..83217) 1 NC_014738.1 COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094: IPR016166; KEGG: fba:FIC_00760 hypothetical protein; PFAM: FAD linked oxidase domain protein; SPTR: Oxidoreductase, FAD-binding protein; PFAM: FAD binding domain; fad linked oxidase domain-containing protein 83217 10000811 Riean_0081 Riemerella anatipestifer ATCC 11845 = DSM 15868 fad linked oxidase domain-containing protein YP_004044762.1 81910 R 693978 CDS YP_004044763.1 313205586 10000812 complement(83217..84107) 1 NC_014738.1 COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537; KEGG: fba:FIC_00759 UbiA prenyltransferase family protein; PFAM: UbiA prenyltransferase; SPTR: UbiA prenyltransferase family protein; PFAM: UbiA prenyltransferase family; ubia prenyltransferase 84107 10000812 Riean_0082 Riemerella anatipestifer ATCC 11845 = DSM 15868 ubia prenyltransferase YP_004044763.1 83217 R 693978 CDS YP_004044764.1 313205587 10000813 complement(84190..84882) 1 NC_014738.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR006664; KEGG: fba:FIC_00758 OmpA/MotB domain protein; PFAM: OmpA/MotB domain protein; SPTR: OmpA/MotB domain protein; PFAM: Rickettsia 17 kDa surface antigen; OmpA family; ompa/motb domain-containing protein 84882 10000813 Riean_0083 Riemerella anatipestifer ATCC 11845 = DSM 15868 ompa/motb domain-containing protein YP_004044764.1 84190 R 693978 CDS YP_004044765.1 313205588 10000814 complement(84891..85382) 1 NC_014738.1 KEGG: fba:FIC_00757 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 85382 10000814 Riean_0084 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044765.1 84891 R 693978 CDS YP_004044766.1 313205589 10000815 85530..86930 1 NC_014738.1 COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: fba:FIC_01537 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase; SPTR: D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4); TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase 86930 10000815 Riean_0085 Riemerella anatipestifer ATCC 11845 = DSM 15868 D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase YP_004044766.1 85530 D 693978 CDS YP_004044767.1 313205590 10000816 86936..88108 1 NC_014738.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594: IPR004358: IPR005467; KEGG: fba:FIC_01536 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 88108 10000816 Riean_0086 Riemerella anatipestifer ATCC 11845 = DSM 15868 integral membrane sensor signal transduction histidine kinase YP_004044767.1 86936 D 693978 CDS YP_004044768.1 313205591 10000817 complement(88124..89245) 1 NC_014738.1 COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: fba:FIC_01309 DNA polymerase III subunits gamma and tau; SPTR: DNA polymerase III subunits gamma and tau; DNA polymerase iii subunits gamma and tau 89245 10000817 Riean_0087 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA polymerase iii subunits gamma and tau YP_004044768.1 88124 R 693978 CDS YP_004044769.1 313205592 10000818 89387..90658 1 NC_014738.1 InterPro IPR000292; KEGG: fba:FIC_01308 outer membrane protein; SPTR: Putative outer membrane protein; outer membrane protein 90658 10000818 Riean_0088 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane protein YP_004044769.1 89387 D 693978 CDS YP_004044770.1 313205593 10000819 90677..91270 1 NC_014738.1 KEGG: fba:FIC_01307 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1239); hypothetical protein 91270 10000819 Riean_0089 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044770.1 90677 D 693978 CDS YP_004044771.1 313205594 10000820 complement(91319..91708) 1 NC_014738.1 KEGG: fba:FIC_00572 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 91708 10000820 Riean_0090 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044771.1 91319 R 693978 CDS YP_004044772.1 313205595 10000821 91743..92354 1 NC_014738.1 InterPro IPR000086: IPR020476: IPR020084; KEGG: fba:FIC_00571 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; nudix hydrolase 92354 10000821 Riean_0091 Riemerella anatipestifer ATCC 11845 = DSM 15868 nudix hydrolase YP_004044772.1 91743 D 693978 CDS YP_004044773.1 313205596 10000822 complement(92337..93611) 1 NC_014738.1 COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR000713: IPR013221: IPR004101: IPR005863; KEGG: fba:FIC_00570 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- -D-alanyl- D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-d iaminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-n-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanylligase 93611 10000822 Riean_0092 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-n-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanylligase YP_004044773.1 92337 R 693978 CDS YP_004044774.1 313205597 10000823 complement(93673..95286) 1 NC_014738.1 COGs: COG1262 conserved hypothetical protein; InterPro IPR005532: IPR019865; KEGG: fba:FIC_00569 GldJ; PFAM: protein of unknown function DUF323; SPTR: GldJ; TIGRFAM: gliding motility-associated lipoprotein GldJ; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ; gliding motility protein gldj 95286 10000823 Riean_0093 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein gldj YP_004044774.1 93673 R 693978 CDS YP_004044775.1 313205598 10000824 95518..99405 1 NC_014738.1 KEGG: fba:FIC_00568 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 99405 10000824 Riean_0094 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044775.1 95518 D 693978 CDS YP_004044776.1 313205599 10000825 99410..100546 1 NC_014738.1 KEGG: fba:FIC_00567 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 100546 10000825 Riean_0095 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044776.1 99410 D 693978 CDS YP_004044777.1 313205600 10000826 100680..101507 1 NC_014738.1 COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: fba:FIC_00815 hypothetical protein; PFAM: protein of unknown function DUF62; SPTR: Putative uncharacterized protein; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; hypothetical protein 101507 10000826 Riean_0096 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044777.1 100680 D 693978 CDS YP_004044778.1 313205601 10000827 101518..102063 1 NC_014738.1 COGs: COG1981 membrane protein; InterPro IPR005265; KEGG: fba:FIC_00813 hypothetical protein; PFAM: Uncharacterised protein family UPF0093; SPTR: Membrane protein; PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein 102063 10000827 Riean_0097 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044778.1 101518 D 693978 CDS YP_004044779.1 313205602 10000828 102078..102812 1 NC_014738.1 KEGG: fba:FIC_00812 gliding motility protein GldF; SPTR: Gliding motility-associated ABC family transporter, permease protein; gliding motility protein gldf 102812 10000828 Riean_0098 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein gldf YP_004044779.1 102078 D 693978 CDS YP_004044780.1 313205603 10000829 102815..104482 1 NC_014738.1 COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; InterPro IPR019196: IPR019863; KEGG: fba:FIC_00811 gliding motility protein GldG; PFAM: ABC-type uncharacterised transport system; SPTR: Gliding motility protein GldG; TIGRFAM: gliding-associated ABC transporter substrate-binding component GldG; PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated ABC transporter substrate-binding component GldG; gliding motility protein gldg 104482 10000829 Riean_0099 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein gldg YP_004044780.1 102815 D 693978 CDS YP_004044781.1 313205604 10000830 complement(104494..105567) 1 NC_014738.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296: IPR018253; KEGG: fba:FIC_01608 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Group 1 glycosyl transferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 105567 10000830 Riean_0100 Riemerella anatipestifer ATCC 11845 = DSM 15868 group 1 glycosyl transferase YP_004044781.1 104494 R 693978 CDS YP_004044782.1 313205605 10000831 complement(105572..107776) 1 NC_014738.1 COGs: COG0514 Superfamily II DNA helicase; InterPro IPR011545: IPR001650: IPR018982: IPR002121: IPR 014001: IPR006293: IPR018329: IPR014021: IPR018087; KEGG: fba:FIC_01605 ATP-dependent DNA helicase RecQ; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; RQC domain; HRDC domain protein; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein; SPTR: Possible superfamily II DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase recq 107776 10000831 Riean_0101 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-dependent DNA helicase recq YP_004044782.1 105572 R 693978 CDS YP_004044783.1 313205606 10000832 107917..108876 1 NC_014738.1 COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR001347: IPR000644: IPR004800; KEGG: fba:FIC_01604 arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein; PRIAM: Arabinose-5-phosphate isomerase; SPTR: Arabinose 5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; kpsf/gutq family protein 108876 10000832 Riean_0102 Riemerella anatipestifer ATCC 11845 = DSM 15868 kpsf/gutq family protein YP_004044783.1 107917 D 693978 CDS YP_004044784.1 313205607 10000833 108897..109724 1 NC_014738.1 COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR002033; KEGG: fba:FIC_01603 twin-arginine translocation protein TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: Sec-independent protein secretion pathway component TatC; PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; sec-independent protein translocase tatc 109724 10000833 Riean_0103 Riemerella anatipestifer ATCC 11845 = DSM 15868 sec-independent protein translocase tatc YP_004044784.1 108897 D 693978 CDS YP_004044785.1 313205608 10000834 109849..113334 1 NC_014738.1 KEGG: fba:FIC_01301 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2723); hypothetical protein 113334 10000834 Riean_0104 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044785.1 109849 D 693978 CDS YP_004044786.1 313205609 10000835 complement(113438..113686) 1 NC_014738.1 KEGG: fba:FIC_00657 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 113686 10000835 Riean_0105 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044786.1 113438 R 693978 CDS YP_004044787.1 313205610 10000836 complement(113690..113998) 1 NC_014738.1 InterPro IPR013766: IPR017936; KEGG: fba:FIC_00658 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin; PFAM: Thioredoxin; thioredoxin domain-containing protein 113998 10000836 Riean_0106 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioredoxin domain-containing protein YP_004044787.1 113690 R 693978 CDS YP_004044788.1 313205611 10000837 complement(114077..114709) 1 NC_014738.1 COGs: COG0450 Peroxiredoxin; InterPro IPR000866: IPR019479: IPR017936; KEGG: fba:FIC_00659 alkyl hydroperoxide reductase subunit C-like protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; SPTR: Peroxiredoxin; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen 114709 10000837 Riean_0107 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen YP_004044788.1 114077 R 693978 CDS YP_004044789.1 313205612 10000838 complement(114834..116030) 1 NC_014738.1 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839: IPR001176: IPR004838; KEGG: fba:FIC_01345 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Aspartate transaminase; PFAM: Aminotransferase class I and II; aminotransferase class i and ii 116030 10000838 Riean_0108 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminotransferase class i and ii YP_004044789.1 114834 R 693978 CDS YP_004044790.1 313205613 10000839 116154..116300 1 NC_014738.1 KEGG: fba:FIC_01041 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 116300 10000839 Riean_0109 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044790.1 116154 D 693978 CDS YP_004044791.1 313205614 10000840 116458..117042 1 NC_014738.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fba:FIC_01412 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; PFAM: cyclic nucleotide-binding; SPTR: cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; PFAM: Cyclic nucleotide-binding domain; transcriptional regulator, crp/fnr family 117042 10000840 Riean_0110 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, crp/fnr family YP_004044791.1 116458 D 693978 CDS YP_004044792.1 313205615 10000841 117101..118492 1 NC_014738.1 COGs: COG0486 GTPase; InterPro IPR004520: IPR018948: IPR002917: IPR005225: IPR 006073; KEGG: fba:FIC_01068 GTPase and tRNA-U34 5-formylation enzyme TrmE; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; SPTR: tRNA modification GTPase mnmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; tRNA modification GTPase trme 118492 10000841 Riean_0111 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA modification GTPase trme YP_004044792.1 117101 D 693978 CDS YP_004044793.1 313205616 10000842 118745..118918 1 NC_014738.1 hypothetical protein 118918 10000842 Riean_0112 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044793.1 118745 D 693978 CDS YP_004044794.1 313205617 10000843 119527..120018 1 NC_014738.1 COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: fba:FIC_01070 secreted protein; PFAM: protein of unknown function DUF336; SPTR: Putative secreted protein; PFAM: Domain of unknown function (DUF336); hypothetical protein 120018 10000843 Riean_0113 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044794.1 119527 D 693978 CDS YP_004044795.1 313205618 10000844 120015..120521 1 NC_014738.1 COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: pcr:Pcryo_1418 hypothetical protein; PFAM: protein of unknown function DUF336; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF336); hypothetical protein 120521 10000844 Riean_0114 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044795.1 120015 D 693978 CDS YP_004044796.1 313205619 10000845 120616..121026 1 NC_014738.1 COGs: COG2351 Transthyretin-like protein; InterPro IPR000895: IPR014306; KEGG: coc:Coch_0235 hydroxyisourate hydrolase; PFAM: Transthyretin; SMART: Transthyretin; SPTR: 5-hydroxyisourate hydrolase; TIGRFAM: hydroxyisourate hydrolase; PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase; hydroxyisourate hydrolase 121026 10000845 Riean_0115 Riemerella anatipestifer ATCC 11845 = DSM 15868 hydroxyisourate hydrolase YP_004044796.1 120616 D 693978 CDS YP_004044797.1 313205620 10000846 complement(121107..121679) 1 NC_014738.1 COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: fba:FIC_01685 rhodanese-like domain protein; PFAM: YceI family protein; SPTR: YCE I family protein; PFAM: YceI-like domain; ycei family protein 121679 10000846 Riean_0116 Riemerella anatipestifer ATCC 11845 = DSM 15868 ycei family protein YP_004044797.1 121107 R 693978 CDS YP_004044798.1 313205621 10000847 complement(121750..122820) 1 NC_014738.1 KEGG: coc:Coch_1286 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 122820 10000847 Riean_0117 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044798.1 121750 R 693978 CDS YP_004044799.1 313205622 10000848 complement(122852..123526) 1 NC_014738.1 KEGG: edi:EDI_141990 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 123526 10000848 Riean_0118 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044799.1 122852 R 693978 CDS YP_004044800.1 313205623 10000849 complement(123516..124058) 1 NC_014738.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: zpr:ZPR_3828 RNA polymerase ECF-type sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma-24 subunit, ecf subfamily 124058 10000849 Riean_0119 Riemerella anatipestifer ATCC 11845 = DSM 15868 RNA polymerase, sigma-24 subunit, ecf subfamily YP_004044800.1 123516 R 693978 CDS YP_004044801.1 313205624 10000850 complement(124190..125881) 1 NC_014738.1 COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: fba:FIC_00756 secreted subtilase family protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Secreted subtilase family protein; PFAM: Subtilase family; peptidase s8 and s53 subtilisin kexin sedolisin 125881 10000850 Riean_0120 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase s8 and s53 subtilisin kexin sedolisin YP_004044801.1 124190 R 693978 CDS YP_004044802.1 313205625 10000851 complement(125936..126544) 1 NC_014738.1 InterPro IPR014985; KEGG: fba:FIC_00755 hypothetical protein; PFAM: WbqC-like family protein; SPTR: Putative uncharacterized protein; PFAM: WbqC-like protein family; wbqc-like family protein 126544 10000851 Riean_0121 Riemerella anatipestifer ATCC 11845 = DSM 15868 wbqc-like family protein YP_004044802.1 125936 R 693978 CDS YP_004044803.1 313205626 10000852 complement(126545..128155) 1 NC_014738.1 COGs: COG0681 Signal peptidase I; InterPro IPR019759: IPR000223; KEGG: fba:FIC_00754 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase i 128155 10000852 Riean_0122 Riemerella anatipestifer ATCC 11845 = DSM 15868 signal peptidase i YP_004044803.1 126545 R 693978 CDS YP_004044804.1 313205627 10000853 complement(128188..128886) 1 NC_014738.1 COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR011770: IPR000846; KEGG: fba:FIC_00753 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 128886 10000853 Riean_0123 Riemerella anatipestifer ATCC 11845 = DSM 15868 dihydrodipicolinate reductase YP_004044804.1 128188 R 693978 CDS YP_004044805.1 313205628 10000854 complement(128899..129495) 1 NC_014738.1 KEGG: fba:FIC_00752 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 129495 10000854 Riean_0124 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044805.1 128899 R 693978 CDS YP_004044806.1 313205629 10000855 complement(129500..130390) 1 NC_014738.1 COGs: COG1475 transcriptional regulator protein; InterPro IPR003115: IPR004437; KEGG: fba:FIC_00751 chromosome (plasmid) partitioning protein ParB / stage 0 sporulation protein J; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: Stage 0 DNA-binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; parb-like partition protein 130390 10000855 Riean_0125 Riemerella anatipestifer ATCC 11845 = DSM 15868 parb-like partition protein YP_004044806.1 129500 R 693978 CDS YP_004044807.1 313205630 10000856 complement(130417..131190) 1 NC_014738.1 COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: fba:FIC_00750 ParA-like ATPase; SPTR: ParA-like ATPase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; para-like ATPase 131190 10000856 Riean_0126 Riemerella anatipestifer ATCC 11845 = DSM 15868 para-like ATPase YP_004044807.1 130417 R 693978 CDS YP_004044808.1 313205631 10000857 complement(131358..132209) 1 NC_014738.1 KEGG: fba:FIC_00749 TonB family protein; SPTR: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; tonb family protein 132209 10000857 Riean_0127 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb family protein YP_004044808.1 131358 R 693978 CDS YP_004044809.1 313205632 10000858 complement(132383..133837) 1 NC_014738.1 COGs: COG0795 permease; InterPro IPR005495; KEGG: fba:FIC_01427 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: YjgP/YjgQ family permease; PFAM: Predicted permease YjgP/YjgQ family; permease yjgp/yjgq family protein 133837 10000858 Riean_0128 Riemerella anatipestifer ATCC 11845 = DSM 15868 permease yjgp/yjgq family protein YP_004044809.1 132383 R 693978 CDS YP_004044810.1 313205633 10000859 complement(133921..134676) 1 NC_014738.1 KEGG: coc:Coch_0300 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 134676 10000859 Riean_0129 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044810.1 133921 R 693978 CDS YP_004044811.1 313205634 10000860 complement(134689..135336) 1 NC_014738.1 KEGG: fba:FIC_01426 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 135336 10000860 Riean_0130 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044811.1 134689 R 693978 CDS YP_004044812.1 313205635 10000861 complement(135348..137843) 1 NC_014738.1 COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543: IPR018541; KEGG: fba:FIC_01425 cell division protein FtsK; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SPTR: Cell division protein ftsK; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; cell division protein ftsk/spoiiie 137843 10000861 Riean_0131 Riemerella anatipestifer ATCC 11845 = DSM 15868 cell division protein ftsk/spoiiie YP_004044812.1 135348 R 693978 CDS YP_004044813.1 313205636 10000862 complement(137913..138350) 1 NC_014738.1 KEGG: fba:FIC_00889 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); hypothetical protein 138350 10000862 Riean_0132 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044813.1 137913 R 693978 CDS YP_004044814.1 313205637 10000863 138355..139392 1 NC_014738.1 COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372: IPR005790; KEGG: fba:FIC_00890 DNA polymerase III delta subunit; PFAM: DNA polymerase III delta; SPTR: DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 139392 10000863 Riean_0133 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA polymerase III subunit delta YP_004044814.1 138355 D 693978 CDS YP_004044815.1 313205638 10000864 139422..140444 1 NC_014738.1 COGs: COG3823 Glutamine cyclotransferase; InterPro IPR007788; KEGG: fba:FIC_01534 glutamine cyclotransferase; PFAM: glutamine cyclotransferase; SPTR: Glutamine cyclotransferase; PFAM: Glutamine cyclotransferase; glutamine cyclotransferase 140444 10000864 Riean_0134 Riemerella anatipestifer ATCC 11845 = DSM 15868 glutamine cyclotransferase YP_004044815.1 139422 D 693978 CDS YP_004044816.1 313205639 10000865 140454..141215 1 NC_014738.1 KEGG: fba:FIC_01533 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 141215 10000865 Riean_0135 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044816.1 140454 D 693978 CDS YP_004044817.1 313205640 10000866 141245..141859 1 NC_014738.1 COGs: COG1428 Deoxynucleoside kinase; InterPro IPR001977: IPR002624; KEGG: fba:FIC_01532 deoxyadenosine kinase; PFAM: deoxynucleoside kinase; Dephospho-CoA kinase; SPTR: Deoxynucleoside kinase; PFAM: Deoxynucleoside kinase; deoxynucleoside kinase 141859 10000866 Riean_0136 Riemerella anatipestifer ATCC 11845 = DSM 15868 deoxynucleoside kinase YP_004044817.1 141245 D 693978 CDS YP_004044818.1 313205641 10000867 141933..142496 1 NC_014738.1 KEGG: coc:Coch_0811 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: OmpW family; hypothetical protein 142496 10000867 Riean_0137 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044818.1 141933 D 693978 CDS YP_004044819.1 313205642 10000868 142613..143278 1 NC_014738.1 KEGG: nma:NMA0664 transposase for IS1016; SPTR: Putative transposase; hypothetical protein 143278 10000868 Riean_0138 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044819.1 142613 D 693978 CDS YP_004044820.1 313205643 10000869 143441..143962 1 NC_014738.1 COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: fba:FIC_00836 hypothetical protein; PFAM: NLP/P60 protein; SPTR: Possible lipoprotein; PFAM: NlpC/P60 family; nlp/p60 protein 143962 10000869 Riean_0139 Riemerella anatipestifer ATCC 11845 = DSM 15868 nlp/p60 protein YP_004044820.1 143441 D 693978 CDS YP_004044821.1 313205644 10000870 143978..144790 1 NC_014738.1 COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451: IPR018357; KEGG: fba:FIC_00837 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; SPTR: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 144790 10000870 Riean_0140 Riemerella anatipestifer ATCC 11845 = DSM 15868 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004044821.1 143978 D 693978 CDS YP_004044822.1 313205645 10000871 144796..145971 1 NC_014738.1 KEGG: fps:FP1635 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2029); hypothetical protein 145971 10000871 Riean_0141 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044822.1 144796 D 693978 CDS YP_004044823.1 313205646 10000872 145986..146915 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: coc:Coch_0236 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 146915 10000872 Riean_0142 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004044823.1 145986 D 693978 CDS YP_004044824.1 313205647 10000873 146921..147694 1 NC_014738.1 InterPro IPR002509; KEGG: coc:Coch_0234 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; PFAM: Domain of unknown function (DUF3473); Polysaccharide deacetylase; polysaccharide deacetylase 147694 10000873 Riean_0143 Riemerella anatipestifer ATCC 11845 = DSM 15868 polysaccharide deacetylase YP_004044824.1 146921 D 693978 CDS YP_004044825.1 313205648 10000874 147700..148794 1 NC_014738.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fba:FIC_00839 mannosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Mannosyltransferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 148794 10000874 Riean_0144 Riemerella anatipestifer ATCC 11845 = DSM 15868 group 1 glycosyl transferase YP_004044825.1 147700 D 693978 CDS YP_004044826.1 313205649 10000875 148886..150124 1 NC_014738.1 COGs: COG0151 Phosphoribosylamine-glycine ligase; InterPro IPR000115: IPR020562: IPR020561: IPR020560: IPR 011761: IPR020559: IPR005479; KEGG: fba:FIC_00555 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Putative uncharacterized protein; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 150124 10000875 Riean_0145 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoribosylamine--glycine ligase YP_004044826.1 148886 D 693978 CDS YP_004044827.1 313205650 10000876 150218..151747 1 NC_014738.1 COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterPro IPR000991: IPR001674: IPR004739: IPR011702: IPR 001317: IPR006220: IPR017926; KEGG: fba:FIC_00556 GMP synthase; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; SPTR: Bifunctional GMP synthase/glutamine amidotransferase protein; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; gmp synthase (glutamine-hydrolyzing) 151747 10000876 Riean_0146 Riemerella anatipestifer ATCC 11845 = DSM 15868 gmp synthase (glutamine-hydrolyzing) YP_004044827.1 150218 D 693978 CDS YP_004044828.1 313205651 10000877 151778..152659 1 NC_014738.1 COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_08500 hypothetical protein; PFAM: MscS Mechanosensitive ion channel; SPTR: Putative uncharacterized protein; PFAM: Mechanosensitive ion channel; mscs mechanosensitive ion channel 152659 10000877 Riean_0147 Riemerella anatipestifer ATCC 11845 = DSM 15868 mscs mechanosensitive ion channel YP_004044828.1 151778 D 693978 CDS YP_004044829.1 313205652 10000878 complement(152704..153942) 1 NC_014738.1 COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: fba:FIC_01052 protein containing DUF1015; PFAM: Uncharacterised conserved protein UCP033563; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1015); hypothetical protein 153942 10000878 Riean_0148 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044829.1 152704 R 693978 CDS YP_004044830.1 313205653 10000879 complement(153944..154897) 1 NC_014738.1 COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: fba:FIC_01053 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein 154897 10000879 Riean_0149 Riemerella anatipestifer ATCC 11845 = DSM 15868 D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein YP_004044830.1 153944 R 693978 CDS YP_004044831.1 313205654 10000880 complement(154913..155974) 1 NC_014738.1 COGs: COG1932 Phosphoserine aminotransferase; InterPro IPR000192; KEGG: fba:FIC_01054 phosphoserine aminotransferase; PFAM: aminotransferase class V; PRIAM: Phosphoserine transaminase; SPTR: Phosphoserine transaminase; PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; phosphoserine transaminase 155974 10000880 Riean_0150 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoserine transaminase YP_004044831.1 154913 R 693978 CDS YP_004044832.1 313205655 10000881 complement(156055..156405) 1 NC_014738.1 InterPro IPR017896: IPR017900; KEGG: fba:FIC_01055 ferredoxin; SPTR: Ferredoxin; PFAM: 4Fe-4S binding domain; ferredoxin 156405 10000881 Riean_0151 Riemerella anatipestifer ATCC 11845 = DSM 15868 ferredoxin YP_004044832.1 156055 R 693978 CDS YP_004044833.1 313205656 10000882 156462..157496 1 NC_014738.1 InterPro IPR008670; KEGG: fba:FIC_01059 hypothetical protein; PFAM: acyl-CoA reductase; SPTR: Putative uncharacterized protein; PFAM: Acyl-CoA reductase (LuxC); acyl-CoA reductase 157496 10000882 Riean_0152 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyl-CoA reductase YP_004044833.1 156462 D 693978 CDS YP_004044834.1 313205657 10000883 157547..158239 1 NC_014738.1 COGs: COG0670 Integral membrane protein interacts with FtsH; KEGG: coc:Coch_0111 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0005; hypothetical protein 158239 10000883 Riean_0153 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044834.1 157547 D 693978 CDS YP_004044835.1 313205658 10000884 complement(158312..158968) 1 NC_014738.1 KEGG: coc:Coch_1983 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 158968 10000884 Riean_0154 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044835.1 158312 R 693978 CDS YP_004044836.1 313205659 10000885 complement(159241..159498) 1 NC_014738.1 KEGG: pfa:PF10_0190 conserved Plasmodium protein; SPTR: Conserved Plasmodium protein; hypothetical protein 159498 10000885 Riean_0155 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044836.1 159241 R 693978 CDS YP_004044837.1 313205660 10000886 159723..161078 1 NC_014738.1 COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR003607: IPR006261; KEGG: fba:FIC_00990 deoxyguanosinetriphosphate triphosphohydrolase; PRIAM: dGTPase; SMART: metal-dependent phosphohydrolase HD region; SPTR: Deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; deoxyguanosinetriphosphate triphosphohydrolase 161078 10000886 Riean_0156 Riemerella anatipestifer ATCC 11845 = DSM 15868 deoxyguanosinetriphosphate triphosphohydrolase YP_004044837.1 159723 D 693978 CDS YP_004044838.1 313205661 10000887 161136..161435 1 NC_014738.1 KEGG: fba:FIC_01529 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF493); hypothetical protein 161435 10000887 Riean_0157 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044838.1 161136 D 693978 CDS YP_004044839.1 313205662 10000888 complement(161463..162212) 1 NC_014738.1 InterPro IPR018253; KEGG: fba:FIC_01355 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 162212 10000888 Riean_0158 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044839.1 161463 R 693978 CDS YP_004044840.1 313205663 10000889 162228..163304 1 NC_014738.1 COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: fba:FIC_01356 endoglucanase; PFAM: peptidase M42 family protein; SPTR: Possible cellulase; PFAM: M42 glutamyl aminopeptidase; peptidase m42 family protein 163304 10000889 Riean_0159 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m42 family protein YP_004044840.1 162228 D 693978 CDS YP_004044841.1 313205664 10000890 163405..164223 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_02022 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 164223 10000890 Riean_0160 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044841.1 163405 D 693978 CDS YP_004044842.1 313205665 10000891 164291..164806 1 NC_014738.1 COGs: COG1443 Isopentenyldiphosphate isomerase; InterPro IPR000086: IPR011876; KEGG: fba:FIC_00523 NUDIX hydrolase YfcD; PFAM: NUDIX hydrolase; PRIAM: Isopentenyl-diphosphate Delta-isomerase; SPTR: Putative Nudix hydrolase YfcD; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; isopentenyl-diphosphate delta-isomerase 164806 10000891 Riean_0161 Riemerella anatipestifer ATCC 11845 = DSM 15868 isopentenyl-diphosphate delta-isomerase YP_004044842.1 164291 D 693978 CDS YP_004044843.1 313205666 10000892 164834..165913 1 NC_014738.1 COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); InterPro IPR006222: IPR013977: IPR006223; KEGG: fba:FIC_00521 glycine cleavage system aminomethyltransferase T; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; PRIAM: Aminomethyltransferase; SPTR: Aminomethyltransferase; TIGRFAM: glycine cleavage system T protein; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein; glycine cleavage system t protein 165913 10000892 Riean_0162 Riemerella anatipestifer ATCC 11845 = DSM 15868 glycine cleavage system t protein YP_004044843.1 164834 D 693978 CDS YP_004044844.1 313205667 10000893 complement(165992..167521) 1 NC_014738.1 COGs: COG0696 Phosphoglyceromutase; InterPro IPR005995: IPR011258: IPR006124: IPR016160; KEGG: fba:FIC_01327 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; PRIAM: Phosphoglycerate mutase; SPTR: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; phosphoglycerate mutase 167521 10000893 Riean_0163 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoglycerate mutase YP_004044844.1 165992 R 693978 CDS YP_004044845.1 313205668 10000894 167707..170667 1 NC_014738.1 InterPro IPR001440: IPR019734: IPR013026; KEGG: fba:FIC_00998 TPR-domain containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; tetratricopeptide tpr_1 repeat-containing protein 170667 10000894 Riean_0164 Riemerella anatipestifer ATCC 11845 = DSM 15868 tetratricopeptide tpr_1 repeat-containing protein YP_004044845.1 167707 D 693978 CDS YP_004044846.1 313205669 10000895 170698..172467 1 NC_014738.1 KEGG: fba:FIC_00999 TonB-dependent receptor; SPTR: Possible TonB-dependent receptor; tonb-dependent receptor 172467 10000895 Riean_0165 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004044846.1 170698 D 693978 CDS YP_004044847.1 313205670 10000897 172631..172762 1 NC_014738.1 hypothetical protein 172762 10000897 Riean_0166 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044847.1 172631 D 693978 CDS YP_004044848.1 313205671 10000898 172775..174130 1 NC_014738.1 InterPro IPR002104; KEGG: gfo:GFO_0264 phage integrase family protein; PFAM: integrase family protein; SPTR: Phage integrase family protein; integrase family protein 174130 10000898 Riean_0167 Riemerella anatipestifer ATCC 11845 = DSM 15868 integrase family protein YP_004044848.1 172775 D 693978 CDS YP_004044849.1 313205672 10000899 174143..175204 1 NC_014738.1 COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: sli:Slin_2152 filamentation induced by cAMP protein Fic; PFAM: filamentation induced by cAMP protein Fic; SPTR: Filamentation induced by cAMP protein Fic; PFAM: Fic/DOC family; filamentation induced by camp protein fic 175204 10000899 Riean_0168 Riemerella anatipestifer ATCC 11845 = DSM 15868 filamentation induced by camp protein fic YP_004044849.1 174143 D 693978 CDS YP_004044850.1 313205673 10000900 175356..176099 1 NC_014738.1 KEGG: ate:Athe_0482 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 176099 10000900 Riean_0169 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044850.1 175356 D 693978 CDS YP_004044851.1 313205674 10000901 176235..176522 1 NC_014738.1 InterPro IPR010093; KEGG: coc:Coch_0851 DNA binding domain protein, excisionase family; SPTR: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family; excisionase family DNA binding domain-containing protein 176522 10000901 Riean_0170 Riemerella anatipestifer ATCC 11845 = DSM 15868 excisionase family DNA binding domain-containing protein YP_004044851.1 176235 D 693978 CDS YP_004044852.1 313205675 10000902 176641..177252 1 NC_014738.1 COGs: COG3561 Phage anti-repressor protein; InterPro IPR013557; KEGG: cbk:CLL_A0924 AntB; PFAM: AntA/AntB antirepressor domain protein; SPTR: AntB; PFAM: AntA/AntB antirepressor; anta/antb antirepressor domain-containing protein 177252 10000902 Riean_0171 Riemerella anatipestifer ATCC 11845 = DSM 15868 anta/antb antirepressor domain-containing protein YP_004044852.1 176641 D 693978 CDS YP_004044853.1 313205676 10000903 complement(177233..177547) 1 NC_014738.1 InterPro IPR001387; KEGG: pdi:BDI_2133 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: DNA-binding protein; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 177547 10000903 Riean_0172 Riemerella anatipestifer ATCC 11845 = DSM 15868 helix-turn-helix domain-containing protein YP_004044853.1 177233 R 693978 CDS YP_004044854.1 313205677 10000904 177702..177920 1 NC_014738.1 KEGG: pkn:PKH_113760 SICA antigen (fragment); SPTR: SICA antigen; hypothetical protein 177920 10000904 Riean_0173 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044854.1 177702 D 693978 CDS YP_004044855.1 313205678 10000905 177932..178240 1 NC_014738.1 KEGG: pdi:BDI_0847 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2693); hypothetical protein 178240 10000905 Riean_0174 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044855.1 177932 D 693978 CDS YP_004044856.1 313205679 10000906 178247..178684 1 NC_014738.1 KEGG: fjo:Fjoh_4094 RagB/SusD domain-containing protein; SPTR: Putative uncharacterized protein; hypothetical protein 178684 10000906 Riean_0175 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044856.1 178247 D 693978 CDS YP_004044857.1 313205680 10000907 178697..179227 1 NC_014738.1 KEGG: edi:EDI_047040 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 179227 10000907 Riean_0176 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044857.1 178697 D 693978 CDS YP_004044858.1 313205681 10000908 179394..179816 1 NC_014738.1 KEGG: pop:POPTR_581396 hypothetical protein; SPTR: Predicted protein; hypothetical protein 179816 10000908 Riean_0177 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044858.1 179394 D 693978 CDS YP_004044859.1 313205682 10000909 179879..181261 1 NC_014738.1 KEGG: sli:Slin_5863 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 181261 10000909 Riean_0178 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044859.1 179879 D 693978 CDS YP_004044860.1 313205683 10000910 181764..182045 1 NC_014738.1 KEGG: cfa:611783 EF-hand calcium binding domain 2; SPTR: Putative uncharacterized protein; hypothetical protein 182045 10000910 Riean_0179 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044860.1 181764 D 693978 CDS YP_004044861.1 313205684 10000911 182616..183440 1 NC_014738.1 COGs: COG2996 conserved hypothetical protein; InterPro IPR014464; KEGG: fba:FIC_01590 hypothetical protein; SPTR: Nucleic acid binding protein; hypothetical protein 183440 10000911 Riean_0180 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044861.1 182616 D 693978 CDS YP_004044862.1 313205685 10000912 183443..183796 1 NC_014738.1 COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660; KEGG: fba:FIC_00519 hypothetical protein; PFAM: arsenate reductase and related; SPTR: Possible arsenate reductase; PFAM: ArsC family; arsenate reductase 183796 10000912 Riean_0181 Riemerella anatipestifer ATCC 11845 = DSM 15868 arsenate reductase YP_004044862.1 183443 D 693978 CDS YP_004044863.1 313205686 10000913 complement(183846..184382) 1 NC_014738.1 KEGG: pjd:Pjdr2_3750 serine/threonine protein kinase with PASTA sensor(s); SPTR: Putative uncharacterized protein; hypothetical protein 184382 10000913 Riean_0182 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044863.1 183846 R 693978 CDS YP_004044864.1 313205687 10000914 complement(184411..187269) 1 NC_014738.1 KEGG: chu:CHU_2463 UDP-N-acetylglucosamine enolpyruvyl transferase; SPTR: Putative uncharacterized protein; hypothetical protein 187269 10000914 Riean_0183 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044864.1 184411 R 693978 CDS YP_004044865.1 313205688 10000915 complement(187338..187928) 1 NC_014738.1 InterPro IPR000595; KEGG: fjo:Fjoh_3107 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 187928 10000915 Riean_0184 Riemerella anatipestifer ATCC 11845 = DSM 15868 cyclic nucleotide-binding protein YP_004044865.1 187338 R 693978 CDS YP_004044866.1 313205689 10000916 188086..188514 1 NC_014738.1 KEGG: vpa:VPA0320 lipoprotein; SPTR: Putative lipoprotein; PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance; hypothetical protein 188514 10000916 Riean_0185 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044866.1 188086 D 693978 CDS YP_004044867.1 313205690 10000917 complement(188538..191336) 1 NC_014738.1 KEGG: fba:FIC_00648 aminopeptidase N; SPTR: Aminopeptidase N; aminopeptidase n 191336 10000917 Riean_0186 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminopeptidase n YP_004044867.1 188538 R 693978 CDS YP_004044868.1 313205691 10000918 complement(191429..192841) 1 NC_014738.1 COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR000836: IPR001754: IPR004467: IPR014732; KEGG: fba:FIC_01694 orotate phosphoribosyltransferase; PFAM: Orotidine 5'-phosphate decarboxylase; phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase., Orotidine-5'-phosphate decarboxylase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: orotidine 5'-phosphate decarboxylase; orotate phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; orotate phosphoribosyltransferase; orotidine 5'-phosphate decarboxylase 192841 10000918 Riean_0187 Riemerella anatipestifer ATCC 11845 = DSM 15868 orotidine 5'-phosphate decarboxylase YP_004044868.1 191429 R 693978 CDS YP_004044869.1 313205692 10000919 193258..197685 1 NC_014738.1 InterPro IPR000209: IPR000601; KEGG: sli:Slin_5991 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Peptidase; PFAM: Subtilase family; peptidase s8 and s53 subtilisin kexin sedolisin 197685 10000919 Riean_0188 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase s8 and s53 subtilisin kexin sedolisin YP_004044869.1 193258 D 693978 CDS YP_004044870.1 313205693 10000921 199207..200196 1 NC_014738.1 COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR000728: IPR010918: IPR004733; KEGG: fba:FIC_00552 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; phosphoribosylformylglycinamidine cyclo-ligase 200196 10000921 Riean_0190 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoribosylformylglycinamidine cyclo-ligase YP_004044870.1 199207 D 693978 CDS YP_004044871.1 313205694 10000922 200209..200778 1 NC_014738.1 COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376: IPR004607; KEGG: fba:FIC_00553 phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; SPTR: Phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 200778 10000922 Riean_0191 Riemerella anatipestifer ATCC 11845 = DSM 15868 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase YP_004044871.1 200209 D 693978 CDS YP_004044872.1 313205695 10000923 complement(200852..202600) 1 NC_014738.1 COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004365: IPR004364: IPR004115: IPR004524: IPR 002312: IPR006195; KEGG: fba:FIC_01984 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; aspartyl-tRNA synthetase 202600 10000923 Riean_0192 Riemerella anatipestifer ATCC 11845 = DSM 15868 aspartyl-tRNA synthetase YP_004044872.1 200852 R 693978 CDS YP_004044873.1 313205696 10000924 202768..204438 1 NC_014738.1 COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR000583: IPR001962: IPR006426: IPR017932; KEGG: cat:CA2559_06815 asparagine synthetase B, glutamine-hydrolyzing protein; PFAM: asparagine synthase; glutamine amidotransferase class-II; SPTR: Asparagine synthetase B; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 204438 10000924 Riean_0193 Riemerella anatipestifer ATCC 11845 = DSM 15868 asparagine synthase YP_004044873.1 202768 D 693978 CDS YP_004044874.1 313205697 10000926 complement(205876..206811) 1 NC_014738.1 COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942: IPR006145: IPR000748: IPR018496; KEGG: fba:FIC_00969 ribosomal large subunit pseudouridine synthase B; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; ribosomal large subunit pseudouridine synthase b 206811 10000926 Riean_0195 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribosomal large subunit pseudouridine synthase b YP_004044874.1 205876 R 693978 CDS YP_004044875.1 313205698 10000927 206945..207856 1 NC_014738.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: mmr:Mmar10_2631 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter; ABC transporter 207856 10000927 Riean_0196 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004044875.1 206945 D 693978 CDS YP_004044876.1 313205699 10000928 207861..211517 1 NC_014738.1 COGs: COG0308 Aminopeptidase N; KEGG: sml:Smlt1184 transmembrane protein; SPTR: Aminopeptidase N; transmembrane protein 211517 10000928 Riean_0197 Riemerella anatipestifer ATCC 11845 = DSM 15868 transmembrane protein YP_004044876.1 207861 D 693978 CDS YP_004044877.1 313205700 10000929 211572..212237 1 NC_014738.1 KEGG: nma:NMA0664 transposase for IS1016; SPTR: Putative transposase; hypothetical protein 212237 10000929 Riean_0198 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044877.1 211572 D 693978 CDS YP_004044878.1 313205701 10000930 complement(212415..214631) 1 NC_014738.1 COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: fba:FIC_00973 isocitrate dehydrogenase (NADP); PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; isocitrate dehydrogenase, nADP-dependent 214631 10000930 Riean_0199 Riemerella anatipestifer ATCC 11845 = DSM 15868 isocitrate dehydrogenase, nADP-dependent YP_004044878.1 212415 R 693978 CDS YP_004044879.1 313205702 10000931 215173..216930 1 NC_014738.1 InterPro IPR000209; KEGG: sli:Slin_5991 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Peptidase; PFAM: Subtilase family; peptidase s8 and s53 subtilisin kexin sedolisin 216930 10000931 Riean_0200 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase s8 and s53 subtilisin kexin sedolisin YP_004044879.1 215173 D 693978 CDS YP_004044880.1 313205703 10000932 216930..219602 1 NC_014738.1 InterPro IPR000601: IPR011628; KEGG: mba:Mbar_A0810 surface layer protein; PFAM: PKD domain containing protein; Cleaved adhesin domain protein; SMART: PKD domain containing protein; SPTR: Putative uncharacterized protein; PFAM: Cleaved Adhesin Domain; PKD domain; pkd domain containing protein 219602 10000932 Riean_0201 Riemerella anatipestifer ATCC 11845 = DSM 15868 pkd domain containing protein YP_004044880.1 216930 D 693978 CDS YP_004044881.1 313205704 10000933 219915..220523 1 NC_014738.1 COGs: COG0353 Recombinational DNA repair protein (RecF pathway); InterPro IPR000093: IPR015967: IPR006171: IPR006154; KEGG: fba:FIC_01556 recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain-containing protein; SPTR: Recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; recombination protein recr 220523 10000933 Riean_0202 Riemerella anatipestifer ATCC 11845 = DSM 15868 recombination protein recr YP_004044881.1 219915 D 693978 CDS YP_004044882.1 313205705 10000934 220530..221387 1 NC_014738.1 COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: fba:FIC_01554 glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; SPTR: Possible glycosyl transferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 221387 10000934 Riean_0203 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004044882.1 220530 D 693978 CDS YP_004044883.1 313205706 10000935 complement(221426..221788) 1 NC_014738.1 InterPro IPR004692; KEGG: fba:FIC_01553 hypothetical protein; PFAM: Preprotein translocase SecG subunit; SPTR: Putative uncharacterized protein; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; protein translocase subunit secg 221788 10000935 Riean_0204 Riemerella anatipestifer ATCC 11845 = DSM 15868 protein translocase subunit secg YP_004044883.1 221426 R 693978 CDS YP_004044884.1 313205707 10000936 complement(221930..223972) 1 NC_014738.1 COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: fba:FIC_01549 secreted peptidase, family M16; PFAM: peptidase M16 domain protein; SPTR: Secreted peptidase, family M16; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase m16 domain-containing protein 223972 10000936 Riean_0205 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m16 domain-containing protein YP_004044884.1 221930 R 693978 CDS YP_004044885.1 313205708 10000937 complement(223985..225298) 1 NC_014738.1 COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: fba:FIC_01548 probable peptidase; PFAM: peptidase M16 domain protein; SPTR: Probable peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase m16 domain-containing protein 225298 10000937 Riean_0206 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m16 domain-containing protein YP_004044885.1 223985 R 693978 CDS YP_004044886.1 313205709 10000938 225409..225534 1 NC_014738.1 hypothetical protein 225534 10000938 Riean_0207 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044886.1 225409 D 693978 CDS YP_004044887.1 313205710 10000939 225908..228247 1 NC_014738.1 COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212: IPR014016: IPR014017; KEGG: fba:FIC_01545 ATP-dependent DNA helicase UvrD/PcrA; PFAM: UvrD/REP helicase; SPTR: ATP-dependent DNA helicase UvrD/PcrA; PFAM: UvrD/REP helicase; uvrd/rep helicase 228247 10000939 Riean_0208 Riemerella anatipestifer ATCC 11845 = DSM 15868 uvrd/rep helicase YP_004044887.1 225908 D 693978 CDS YP_004044888.1 313205711 10000940 228302..231109 1 NC_014738.1 COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR020046: IPR020047: IPR002562: IPR001098: IPR 002421: IPR008918: IPR018320: IPR002298: IPR019760; KEGG: fba:FIC_00724 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I; DNA polymerase i 231109 10000940 Riean_0209 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA polymerase i YP_004044888.1 228302 D 693978 CDS YP_004044889.1 313205712 10000941 231190..231879 1 NC_014738.1 InterPro IPR000758; KEGG: fps:FP2138 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 231879 10000941 Riean_0210 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044889.1 231190 D 693978 CDS YP_004044890.1 313205713 10000942 231958..232638 1 NC_014738.1 KEGG: bvu:BVU_1201 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 232638 10000942 Riean_0211 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044890.1 231958 D 693978 CDS YP_004044891.1 313205714 10000943 232682..233527 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fba:FIC_00726 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 233527 10000943 Riean_0212 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004044891.1 232682 D 693978 CDS YP_004044892.1 313205715 10000944 233546..234499 1 NC_014738.1 COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: fba:FIC_00816 phosphate starvation-inducible protein PhoH, predicted ATPase; PFAM: PhoH family protein; SPTR: Phosphate starvation-inducible protein PhoH; PFAM: PhoH-like protein; phoh family protein 234499 10000944 Riean_0213 Riemerella anatipestifer ATCC 11845 = DSM 15868 phoh family protein YP_004044892.1 233546 D 693978 CDS YP_004044893.1 313205716 10000945 complement(234543..235418) 1 NC_014738.1 COGs: COG1159 GTPase; InterPro IPR005662: IPR002917: IPR004044: IPR005225; KEGG: fba:FIC_01336 GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; SPTR: GTP-binding protein era homolog; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein era 235418 10000945 Riean_0214 Riemerella anatipestifer ATCC 11845 = DSM 15868 GTP-binding protein era YP_004044893.1 234543 R 693978 CDS YP_004044894.1 313205717 10000946 complement(235523..235879) 1 NC_014738.1 COGs: COG0335 Ribosomal protein L19; InterPro IPR001857; KEGG: fba:FIC_00871 50S ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein l19p 235879 10000946 Riean_0215 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l19p YP_004044894.1 235523 R 693978 CDS YP_004044895.1 313205718 10000947 236133..237809 1 NC_014738.1 COGs: COG2759 Formyltetrahydrofolate synthetase; InterPro IPR000559: IPR020628; KEGG: coc:Coch_0451 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Formate--tetrahydrofolate ligase; PFAM: Formate--tetrahydrofolate ligase; formate-tetrahydrofolate ligase 237809 10000947 Riean_0216 Riemerella anatipestifer ATCC 11845 = DSM 15868 formate-tetrahydrofolate ligase YP_004044895.1 236133 D 693978 CDS YP_004044896.1 313205719 10000948 237820..238464 1 NC_014738.1 InterPro IPR012506; KEGG: fjo:Fjoh_3510 YhhN family protein; PFAM: YhhN family protein; SPTR: YhhN family protein; PFAM: YhhN-like protein; yhhn family protein 238464 10000948 Riean_0217 Riemerella anatipestifer ATCC 11845 = DSM 15868 yhhn family protein YP_004044896.1 237820 D 693978 CDS YP_004044897.1 313205720 10000949 complement(238545..240362) 1 NC_014738.1 InterPro IPR004843; KEGG: pjd:Pjdr2_4678 PA14 domain protein; PFAM: metallophosphoesterase; SPTR: PA14 domain protein; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 240362 10000949 Riean_0218 Riemerella anatipestifer ATCC 11845 = DSM 15868 metallophosphoesterase YP_004044897.1 238545 R 693978 CDS YP_004044898.1 313205721 10000950 complement(240694..241548) 1 NC_014738.1 COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: fba:FIC_02400 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: Purine nucleoside phosphorylase; PFAM: Phosphorylase superfamily; purine or other phosphorylase family 1 241548 10000950 Riean_0219 Riemerella anatipestifer ATCC 11845 = DSM 15868 purine or other phosphorylase family 1 YP_004044898.1 240694 R 693978 CDS YP_004044899.1 313205722 10000951 complement(241567..241896) 1 NC_014738.1 COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950: IPR017228; KEGG: fba:FIC_02401 translation initiation factor SUI1-related protein; PFAM: translation initiation factor SUI1; SPTR: Translation initiation factor SUI1; PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic; translation initiation factor 1 (eif-1/sui1) 241896 10000951 Riean_0220 Riemerella anatipestifer ATCC 11845 = DSM 15868 translation initiation factor 1 (eif-1/sui1) YP_004044899.1 241567 R 693978 CDS YP_004044900.1 313205723 10000952 complement(242025..243599) 1 NC_014738.1 COGs: COG1418 HD superfamily hydrolase; InterPro IPR017705: IPR018111: IPR006674: IPR004087: IPR 003607: IPR006675: IPR004088; KEGG: fba:FIC_00518 phosphodiesterase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; SPTR: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; metal dependent phosphohydrolase 243599 10000952 Riean_0221 Riemerella anatipestifer ATCC 11845 = DSM 15868 metal dependent phosphohydrolase YP_004044900.1 242025 R 693978 CDS YP_004044901.1 313205724 10000953 complement(243863..244141) 1 NC_014738.1 KEGG: fba:FIC_00517 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cell division protein ZapA; hypothetical protein 244141 10000953 Riean_0222 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044901.1 243863 R 693978 CDS YP_004044902.1 313205725 10000954 complement(244141..244443) 1 NC_014738.1 KEGG: fba:FIC_00516 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 244443 10000954 Riean_0223 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044902.1 244141 R 693978 CDS YP_004044903.1 313205726 10000955 244697..246556 1 NC_014738.1 COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR003594: IPR013506: IPR001241: IPR000565: IPR 018522; KEGG: fba:FIC_01276 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: Possible DNA topoisomerase (ATP-hydrolyzing); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; DNA topoisomerase type IIa subunit B domain-containing protein 246556 10000955 Riean_0224 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA topoisomerase type IIa subunit B domain-containing protein YP_004044903.1 244697 D 693978 CDS YP_004044904.1 313205727 10000956 246576..247070 1 NC_014738.1 KEGG: gfo:GFO_1480 membrane protein; SPTR: Putative uncharacterized protein; hypothetical protein 247070 10000956 Riean_0225 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044904.1 246576 D 693978 CDS YP_004044905.1 313205728 10000957 247073..249646 1 NC_014738.1 COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205; KEGG: fba:FIC_01277 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: Topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA topoisomerase 249646 10000957 Riean_0226 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA topoisomerase YP_004044905.1 247073 D 693978 CDS YP_004044906.1 313205729 10000958 249688..251895 1 NC_014738.1 COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterPro IPR006674: IPR007685: IPR004095: IPR002912: IPR 003607: IPR004811; KEGG: fba:FIC_01539 GTP pyrophosphokinase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino aciD-binding ACT domain protein; PRIAM: GTP diphosphokinase; SMART: metal-dependent phosphohydrolase HD region; SPTR: Possible GTP diphosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; (p)ppGpp synthetase I SpoT/RelA 251895 10000958 Riean_0227 Riemerella anatipestifer ATCC 11845 = DSM 15868 (p)ppGpp synthetase I SpoT/RelA YP_004044906.1 249688 D 693978 CDS YP_004044907.1 313205730 10000959 251926..253278 1 NC_014738.1 COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: cpi:Cpin_4662 Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; SPTR: Na+/H+ antiporter NhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; TC 2.A.33.1.1; NhaA family sodium/proton antiporter 253278 10000959 Riean_0228 Riemerella anatipestifer ATCC 11845 = DSM 15868 NhaA family sodium/proton antiporter YP_004044907.1 251926 D 693978 CDS YP_004044908.1 313205731 10000960 complement(253431..255119) 1 NC_014738.1 COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: fba:FIC_01512 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 255119 10000960 Riean_0229 Riemerella anatipestifer ATCC 11845 = DSM 15868 gamma-glutamyltransferase YP_004044908.1 253431 R 693978 CDS YP_004044909.1 313205732 10000961 complement(255285..255977) 1 NC_014738.1 KEGG: sli:Slin_3643 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 255977 10000961 Riean_0230 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044909.1 255285 R 693978 CDS YP_004044910.1 313205733 10000962 complement(256032..256571) 1 NC_014738.1 KEGG: mmw:Mmwyl1_1690 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 256571 10000962 Riean_0231 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044910.1 256032 R 693978 CDS YP_004044911.1 313205734 10000963 complement(256640..257374) 1 NC_014738.1 COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR002028: IPR018204; KEGG: fba:FIC_01491 tryptophan synthase alpha chain; PFAM: tryptophan synthase alpha chain; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha 257374 10000963 Riean_0232 Riemerella anatipestifer ATCC 11845 = DSM 15868 tryptophan synthase subunit alpha YP_004044911.1 256640 R 693978 CDS YP_004044912.1 313205735 10000964 complement(257385..257684) 1 NC_014738.1 KEGG: fps:FP1118 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 257684 10000964 Riean_0233 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044912.1 257385 R 693978 CDS YP_004044913.1 313205736 10000965 complement(257688..258872) 1 NC_014738.1 COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR001926: IPR006654: IPR006653; KEGG: fba:FIC_01492 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Tryptophan synthase; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 258872 10000965 Riean_0234 Riemerella anatipestifer ATCC 11845 = DSM 15868 tryptophan synthase subunit beta YP_004044913.1 257688 R 693978 CDS YP_004044914.1 313205737 10000966 complement(258885..259523) 1 NC_014738.1 COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: fba:FIC_01493 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase 259523 10000966 Riean_0235 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoribosylanthranilate isomerase YP_004044914.1 258885 R 693978 CDS YP_004044915.1 313205738 10000967 complement(259527..260303) 1 NC_014738.1 COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798: IPR001468; KEGG: fba:FIC_01494 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase 260303 10000967 Riean_0236 Riemerella anatipestifer ATCC 11845 = DSM 15868 Indole-3-glycerol phosphate synthase YP_004044915.1 259527 R 693978 CDS YP_004044916.1 313205739 10000968 complement(260304..260882) 1 NC_014738.1 COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019: IPR004597; KEGG: zpr:ZPR_4445 DNA-3-methyladenine glycosylase; PFAM: methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: DNA-3-methyladenine glycosidase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase i 260882 10000968 Riean_0237 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA-3-methyladenine glycosylase i YP_004044916.1 260304 R 693978 CDS YP_004044917.1 313205740 10000969 complement(260882..261868) 1 NC_014738.1 COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR005940: IPR017459: IPR000312; KEGG: fba:FIC_01495 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 261868 10000969 Riean_0238 Riemerella anatipestifer ATCC 11845 = DSM 15868 anthranilate phosphoribosyltransferase YP_004044917.1 260882 R 693978 CDS YP_004044918.1 313205741 10000970 complement(261894..262466) 1 NC_014738.1 COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR000991: IPR006221: IPR006220: IPR011702: IPR 001317: IPR017926; KEGG: fba:FIC_01496 anthranilate synthase, amidotransferase component; PFAM: glutamine amidotransferase class-I; SPTR: Anthranilate synthase, amidotransferase component; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; anthranilate synthase, component ii 262466 10000970 Riean_0239 Riemerella anatipestifer ATCC 11845 = DSM 15868 anthranilate synthase, component ii YP_004044918.1 261894 R 693978 CDS YP_004044919.1 313205742 10000971 complement(262485..263900) 1 NC_014738.1 COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805: IPR015890: IPR019999; KEGG: fba:FIC_01497 anthranilate synthase, aminase component; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; SPTR: Anthranilate synthase, aminase component; PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; chorismate binding protein 263900 10000971 Riean_0240 Riemerella anatipestifer ATCC 11845 = DSM 15868 chorismate binding protein YP_004044919.1 262485 R 693978 CDS YP_004044920.1 313205743 10000972 264262..266187 1 NC_014738.1 COGs: COG0441 Threonyl-tRNA synthetase; InterPro IPR004095: IPR012947: IPR002314: IPR004154: IPR 002320: IPR018158: IPR006195; KEGG: fba:FIC_00854 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; SPTR: Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase 266187 10000972 Riean_0241 Riemerella anatipestifer ATCC 11845 = DSM 15868 ser-tRNA(thr) hydrolase; threonyl-tRNA synthetase YP_004044920.1 264262 D 693978 CDS YP_004044921.1 313205744 10000973 266278..266775 1 NC_014738.1 COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR019814: IPR019815: IPR001288; KEGG: fba:FIC_00853 translation initiation factor 3; PFAM: Translation initiation factor 3-like; SPTR: Translation initiation factor 3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor 3 (bif-3) 266775 10000973 Riean_0242 Riemerella anatipestifer ATCC 11845 = DSM 15868 translation initiation factor 3 (bif-3) YP_004044921.1 266278 D 693978 CDS YP_004044922.1 313205745 10000974 266787..267428 1 NC_014738.1 KEGG: tme:Tmel_1305 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 267428 10000974 Riean_0243 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044922.1 266787 D 693978 CDS YP_004044923.1 313205746 10000975 267468..267665 1 NC_014738.1 InterPro IPR001706: IPR021137: IPR018265; KEGG: fba:FIC_00851 LSU ribosomal protein L35p; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein l35p 267665 10000975 Riean_0244 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l35p YP_004044923.1 267468 D 693978 CDS YP_004044924.1 313205747 10000976 267789..268133 1 NC_014738.1 COGs: COG0292 Ribosomal protein L20; InterPro IPR005813; KEGG: fba:FIC_00850 LSU ribosomal protein L20p; PFAM: ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein l20p 268133 10000976 Riean_0245 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l20p YP_004044924.1 267789 D 693978 CDS YP_004044925.1 313205748 10000977 268252..269145 1 NC_014738.1 COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176: IPR006108: IPR006180; KEGG: fba:FIC_00925 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; SPTR: 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; 3-hydroxyacyl-CoA dehydrogenase naD-binding protein 269145 10000977 Riean_0246 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-hydroxyacyl-CoA dehydrogenase naD-binding protein YP_004044925.1 268252 D 693978 CDS YP_004044926.1 313205749 10000978 269231..269470 1 NC_014738.1 KEGG: fba:FIC_00923 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 269470 10000978 Riean_0247 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044926.1 269231 D 693978 CDS YP_004044927.1 313205750 10000979 269652..273356 1 NC_014738.1 COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR010918: IPR010141: IPR017926; KEGG: fba:FIC_00791 phosphoribosylformylglycinamidine synthase, synthetase subunit; PFAM: AIR synthase related protein domain protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II; phosphoribosylformylglycinamidine synthase 273356 10000979 Riean_0248 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoribosylformylglycinamidine synthase YP_004044927.1 269652 D 693978 CDS YP_004044928.1 313205751 10000980 273407..274126 1 NC_014738.1 COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR001636: IPR018236; KEGG: fba:FIC_00794 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 274126 10000980 Riean_0249 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_004044928.1 273407 D 693978 CDS YP_004044929.1 313205752 10000981 274155..275630 1 NC_014738.1 COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583: IPR000836: IPR005854: IPR017932; KEGG: fba:FIC_00795 amidophosphoribosyltransferase; PFAM: phosphoribosyltransferase; glutamine amidotransferase class-II; SPTR: Amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; amidophosphoribosyltransferase 275630 10000981 Riean_0250 Riemerella anatipestifer ATCC 11845 = DSM 15868 amidophosphoribosyltransferase YP_004044929.1 274155 D 693978 CDS YP_004044930.1 313205753 10000982 275735..276568 1 NC_014738.1 COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR000005: IPR018060; KEGG: sli:Slin_2506 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; transcriptional regulator, arac family 276568 10000982 Riean_0251 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, arac family YP_004044930.1 275735 D 693978 CDS YP_004044931.1 313205754 10000983 276679..277383 1 NC_014738.1 COGs: COG3485 Protocatechuate 3 4-dioxygenase beta subunit; InterPro IPR000627; KEGG: fjo:Fjoh_1680 intradiol ring-cleavage dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; SPTR: Intradiol ring-cleavage dioxygenase; PFAM: Dioxygenase; intradiol ring-cleavage dioxygenase 277383 10000983 Riean_0252 Riemerella anatipestifer ATCC 11845 = DSM 15868 intradiol ring-cleavage dioxygenase YP_004044931.1 276679 D 693978 CDS YP_004044932.1 313205755 10000984 complement(277468..279168) 1 NC_014738.1 COGs: COG1190 Lysyl-tRNA synthetase (class II); InterPro IPR002313: IPR004365: IPR004364: IPR018149: IPR 006195; KEGG: fba:FIC_01499 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase 279168 10000984 Riean_0253 Riemerella anatipestifer ATCC 11845 = DSM 15868 lysyl-tRNA synthetase YP_004044932.1 277468 R 693978 CDS YP_004044933.1 313205756 10000985 complement(279305..280348) 1 NC_014738.1 COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852: IPR009056; KEGG: tal:Thal_0068 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: Cytochrome-c peroxidase; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 280348 10000985 Riean_0254 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytochrome-c peroxidase YP_004044933.1 279305 R 693978 CDS YP_004044934.1 313205757 10000986 complement(280556..281845) 1 NC_014738.1 COGs: COG0104 Adenylosuccinate synthase; InterPro IPR001114: IPR018220; KEGG: fba:FIC_00747 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase 281845 10000986 Riean_0255 Riemerella anatipestifer ATCC 11845 = DSM 15868 adenylosuccinate synthetase YP_004044934.1 280556 R 693978 CDS YP_004044935.1 313205758 10000987 281971..282486 1 NC_014738.1 InterPro IPR017936; KEGG: fba:FIC_00731 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; SPTR: Thioredoxin family protein; manually curated; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen 282486 10000987 Riean_0256 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen YP_004044935.1 281971 D 693978 CDS YP_004044936.1 313205759 10000988 282562..282786 1 NC_014738.1 KEGG: fba:FIC_01044 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 282786 10000988 Riean_0257 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044936.1 282562 D 693978 CDS YP_004044937.1 313205760 10000990 complement(283012..284817) 1 NC_014738.1 COGs: COG1217 membrane GTPase involved in stress response; InterPro IPR000795: IPR004161: IPR000640: IPR005225: IPR 006298; KEGG: fba:FIC_01264 GTP-binding protein TypA/BipA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: GTP-binding protein; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein typa 284817 10000990 Riean_0258 Riemerella anatipestifer ATCC 11845 = DSM 15868 GTP-binding protein typa YP_004044937.1 283012 R 693978 CDS YP_004044938.1 313205761 10000991 complement(285100..285339) 1 NC_014738.1 KEGG: fba:FIC_01265 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF465); hypothetical protein 285339 10000991 Riean_0259 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044938.1 285100 R 693978 CDS YP_004044939.1 313205762 10000992 285485..286105 1 NC_014738.1 COGs: COG0572 Uridine kinase; InterPro IPR000764: IPR017975; KEGG: fba:FIC_00953 uridine kinase; SPTR: Uridine kinase; TIGRFAM: uridine kinase; PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase; uridine kinase 286105 10000992 Riean_0260 Riemerella anatipestifer ATCC 11845 = DSM 15868 uridine kinase YP_004044939.1 285485 D 693978 CDS YP_004044940.1 313205763 10000993 286102..286470 1 NC_014738.1 InterPro IPR007060; KEGG: fba:FIC_00954 hypothetical protein; PFAM: Septum formation initiator; SPTR: Putative uncharacterized protein; PFAM: Septum formation initiator; septum formation initiator 286470 10000993 Riean_0261 Riemerella anatipestifer ATCC 11845 = DSM 15868 septum formation initiator YP_004044940.1 286102 D 693978 CDS YP_004044941.1 313205764 10000994 286486..287433 1 NC_014738.1 COGs: COG1162 GTPase; InterPro IPR004881: IPR010914; KEGG: fba:FIC_01360 ribosome-associated GTPase; PFAM: GTPase EngC; SPTR: GTP-binding protein; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; ribosome small subunit-dependent GTPase a 287433 10000994 Riean_0262 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribosome small subunit-dependent GTPase a YP_004044941.1 286486 D 693978 CDS YP_004044942.1 313205765 10000995 complement(287436..288500) 1 NC_014738.1 COGs: COG2377 molecular chaperone distantly related to HSP70-fold metalloprotease; InterPro IPR005338; KEGG: fps:FP1927 anhydro-N-acetylmuramic acid kinase; PFAM: protein of unknown function UPF0075; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0075); hypothetical protein 288500 10000995 Riean_0263 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044942.1 287436 R 693978 CDS YP_004044943.1 313205766 10000996 complement(288624..289106) 1 NC_014738.1 KEGG: ckl:CKL_0943 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 289106 10000996 Riean_0264 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044943.1 288624 R 693978 CDS YP_004044944.1 313205767 10000997 complement(289149..289250) 1 NC_014738.1 hypothetical protein 289250 10000997 Riean_0265 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044944.1 289149 R 693978 CDS YP_004044945.1 313205768 10000998 complement(289301..290056) 1 NC_014738.1 COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652: IPR020861; KEGG: fba:FIC_01463 triosephosphate isomerase; PFAM: triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase 290056 10000998 Riean_0266 Riemerella anatipestifer ATCC 11845 = DSM 15868 triosephosphate isomerase YP_004044945.1 289301 R 693978 CDS YP_004044946.1 313205769 10000999 complement(290075..290425) 1 NC_014738.1 KEGG: fba:FIC_01461 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 290425 10000999 Riean_0267 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044946.1 290075 R 693978 CDS YP_004044947.1 313205770 10001000 complement(290463..291536) 1 NC_014738.1 InterPro IPR011637; KEGG: fba:FIC_01460 hypothetical protein; PFAM: DoxX family protein; SPTR: Putative uncharacterized protein; doxx family protein 291536 10001000 Riean_0268 Riemerella anatipestifer ATCC 11845 = DSM 15868 doxx family protein YP_004044947.1 290463 R 693978 CDS YP_004044948.1 313205771 10001001 complement(291529..292080) 1 NC_014738.1 InterPro IPR011630; KEGG: fba:FIC_01459 hypothetical protein; PFAM: protein of unknown function DUF1599; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1599); hypothetical protein 292080 10001001 Riean_0269 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044948.1 291529 R 693978 CDS YP_004044949.1 313205772 10001002 292255..292563 1 NC_014738.1 InterPro IPR001845; KEGG: cli:Clim_2026 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Putative transcriptional regulator, ArsR family protein; PFAM: Bacterial regulatory protein, arsR family; ArsR family transcriptional regulator 292563 10001002 Riean_0270 Riemerella anatipestifer ATCC 11845 = DSM 15868 ArsR family transcriptional regulator YP_004044949.1 292255 D 693978 CDS YP_004044950.1 313205773 10001003 292597..293691 1 NC_014738.1 KEGG: cpi:Cpin_2592 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 293691 10001003 Riean_0271 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044950.1 292597 D 693978 CDS YP_004044951.1 313205774 10001004 293797..294267 1 NC_014738.1 KEGG: fjo:Fjoh_4238 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 294267 10001004 Riean_0272 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044951.1 293797 D 693978 CDS YP_004044952.1 313205775 10001007 complement(294953..296317) 1 NC_014738.1 COGs: COG0541 Signal recognition particle GTPase; InterPro IPR013822: IPR000897: IPR004125: IPR003593: IPR 004780; KEGG: fba:FIC_00821 signal recognition particle, subunit Ffh SRP54; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; SPTR: Signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; signal recognition particle subunit ffh/srp54 (srp54) 296317 10001007 Riean_0275 Riemerella anatipestifer ATCC 11845 = DSM 15868 signal recognition particle subunit ffh/srp54 (srp54) YP_004044952.1 294953 R 693978 CDS YP_004044953.1 313205776 10001008 complement(296393..297079) 1 NC_014738.1 COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fba:FIC_00496 tRNA (guanosine18-2'-O-) -methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: tRNA/rRNA methyltransferase (SpoU); PFAM: SpoU rRNA Methylase family; tRNA/rRNA methyltransferase (spou) 297079 10001008 Riean_0276 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA/rRNA methyltransferase (spou) YP_004044953.1 296393 R 693978 CDS YP_004044954.1 313205777 10001009 complement(297076..297921) 1 NC_014738.1 COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR007848: IPR004556: IPR019874: IPR002052; KEGG: fba:FIC_00834 protoporphyrinogen oxidase; PFAM: methyltransferase small; SPTR: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: Methyltransferase small domain; TIGRFAM: HemK family methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; protein-(glutamine-n5) methyltransferase, release factor-specific 297921 10001009 Riean_0277 Riemerella anatipestifer ATCC 11845 = DSM 15868 protein-(glutamine-n5) methyltransferase, release factor-specific YP_004044954.1 297076 R 693978 CDS YP_004044955.1 313205778 10001010 complement(297921..298679) 1 NC_014738.1 COGs: COG3022 conserved hypothetical protein; InterPro IPR005583; KEGG: fba:FIC_01189 UPF0246 protein YaaA; PFAM: protein of unknown function DUF328; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF328); hypothetical protein 298679 10001010 Riean_0278 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044955.1 297921 R 693978 CDS YP_004044956.1 313205779 10001011 298802..299785 1 NC_014738.1 KEGG: bth:BT_3110 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 299785 10001011 Riean_0279 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044956.1 298802 D 693978 CDS YP_004044957.1 313205780 10001012 299790..302468 1 NC_014738.1 KEGG: bth:BT_3111 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 302468 10001012 Riean_0280 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044957.1 299790 D 693978 CDS YP_004044958.1 313205781 10001013 302701..303234 1 NC_014738.1 KEGG: lac:LBA0097 hypothetical protein; SPTR: Putative uncharacterized protein lemA; hypothetical protein 303234 10001013 Riean_0281 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044958.1 302701 D 693978 CDS YP_004044959.1 313205782 10001014 complement(303334..304848) 1 NC_014738.1 COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR011607: IPR013982: IPR002695; KEGG: fba:FIC_00554 IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme formylation region; SPTR: IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; imp cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase 304848 10001014 Riean_0282 Riemerella anatipestifer ATCC 11845 = DSM 15868 imp cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase YP_004044959.1 303334 R 693978 CDS YP_004044960.1 313205783 10001015 complement(304868..305452) 1 NC_014738.1 KEGG: fba:FIC_00383 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 305452 10001015 Riean_0283 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044960.1 304868 R 693978 CDS YP_004044961.1 313205784 10001016 complement(305476..308298) 1 NC_014738.1 COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439: IPR004602: IPR017871; KEGG: fba:FIC_00654 excinuclease ABC subunit A; PFAM: ABC transporter related; SPTR: Excision endonuclease subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC, a subunit 308298 10001016 Riean_0284 Riemerella anatipestifer ATCC 11845 = DSM 15868 excinuclease ABC, a subunit YP_004044961.1 305476 R 693978 CDS YP_004044962.1 313205785 10001017 complement(308425..309369) 1 NC_014738.1 COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: rbi:RB2501_06835 membrane protease protein family protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Membrane protease protein family protein; PFAM: SPFH domain / Band 7 family; hypothetical protein 309369 10001017 Riean_0285 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044962.1 308425 R 693978 CDS YP_004044963.1 313205786 10001018 309700..311481 1 NC_014738.1 COGs: COG0539 Ribosomal protein S1; InterPro IPR003029: IPR000110; KEGG: fba:FIC_00867 30S ribosomal protein S1; PFAM: RNA binding S1 domain protein; SPTR: 30S ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; 30S ribosomal protein s1p 311481 10001018 Riean_0286 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein s1p YP_004044963.1 309700 D 693978 CDS YP_004044964.1 313205787 10001019 complement(311699..312865) 1 NC_014738.1 COGs: COG3579 Aminopeptidase C; InterPro IPR004134: IPR000169; KEGG: fjo:Fjoh_1152 peptidase C1B, bleomycin hydrolase; PFAM: peptidase C1B bleomycin hydrolase; SPTR: Aminopeptidase C (Bleomycin hydrolase); PFAM: Peptidase C1-like family; peptidase c1b bleomycin hydrolase 312865 10001019 Riean_0287 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase c1b bleomycin hydrolase YP_004044964.1 311699 R 693978 CDS YP_004044965.1 313205788 10001020 complement(312920..313771) 1 NC_014738.1 COGs: COG1597 Sphingosine kinase; InterPro IPR001206: IPR005218; KEGG: fba:FIC_01503 transcription regulator (contains diacylglycerol kinase catalytic domain); PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; SPTR: Transcription regulator (Contains diacylglycerol kinase catalytic domain); PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family; diacylglycerol kinase catalytic subunit 313771 10001020 Riean_0288 Riemerella anatipestifer ATCC 11845 = DSM 15868 diacylglycerol kinase catalytic subunit YP_004044965.1 312920 R 693978 CDS YP_004044966.1 313205789 10001021 complement(313806..314528) 1 NC_014738.1 COGs: COG0321 Lipoate-protein ligase B; InterPro IPR000544: IPR004143: IPR020605; KEGG: fba:FIC_01490 Octanoate-[acyl-carrier-protein]-protein-N-octan oyltransferase; PFAM: biotin/lipoate A/B protein ligase; PRIAM: Lipoyl(octanoyl) transferase; SPTR: Octanoyltransferase; TIGRFAM: lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B; lipoate-protein ligase b 314528 10001021 Riean_0289 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipoate-protein ligase b YP_004044966.1 313806 R 693978 CDS YP_004044967.1 313205790 10001022 complement(314611..314991) 1 NC_014738.1 COGs: COG4654 Cytochrome c551/c552; InterPro IPR003088: IPR002324: IPR009056; KEGG: fba:FIC_02105 cytochrome c551/c552; PFAM: cytochrome c class I; SPTR: Cytochrome c551/c552; PFAM: Cytochrome c; cytochrome c class i 314991 10001022 Riean_0290 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytochrome c class i YP_004044967.1 314611 R 693978 CDS YP_004044968.1 313205791 10001023 complement(314997..315197) 1 NC_014738.1 KEGG: fba:FIC_01498 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 315197 10001023 Riean_0291 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044968.1 314997 R 693978 CDS YP_004044969.1 313205792 10001024 315371..315727 1 NC_014738.1 KEGG: dfe:Dfer_0994 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 315727 10001024 Riean_0292 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044969.1 315371 D 693978 CDS YP_004044970.1 313205793 10001025 315830..318970 1 NC_014738.1 COGs: COG3696 Putative silver efflux pump; InterPro IPR001036: IPR004763; KEGG: fps:FP0880 multidrug resistance protein precursor AcrB/AcrD/AcrF family protein; PFAM: acriflavin resistance protein; SPTR: Probable multidrug resistance protein. AcrB/AcrD/AcrF family protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); heavy metal efflux pump, czca family 318970 10001025 Riean_0293 Riemerella anatipestifer ATCC 11845 = DSM 15868 heavy metal efflux pump, czca family YP_004044970.1 315830 D 693978 CDS YP_004044971.1 313205794 10001026 319006..320241 1 NC_014738.1 COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fjo:Fjoh_4462 CzcA family heavy metal efflux protein; PFAM: outer membrane efflux protein; SPTR: Heavy metal efflux pump, CzcA family; PFAM: Outer membrane efflux protein; outer membrane efflux protein 320241 10001026 Riean_0294 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane efflux protein YP_004044971.1 319006 D 693978 CDS YP_004044972.1 313205795 10001027 320247..321383 1 NC_014738.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fjo:Fjoh_4463 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; efflux transporter, rnd family, mfp subunit 321383 10001027 Riean_0295 Riemerella anatipestifer ATCC 11845 = DSM 15868 efflux transporter, rnd family, mfp subunit YP_004044972.1 320247 D 693978 CDS YP_004044973.1 313205796 10001028 321406..322452 1 NC_014738.1 COGs: COG0730 permease; InterPro IPR002781; KEGG: net:Neut_0377 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 322452 10001028 Riean_0296 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044973.1 321406 D 693978 CDS YP_004044974.1 313205797 10001029 322439..323167 1 NC_014738.1 COGs: COG1814 Uncharacterized membrane protein; InterPro IPR008217; KEGG: chu:CHU_1290 integral membrane protein; PFAM: protein of unknown function DUF125 transmembrane; SPTR: Integral membrane protein; PFAM: VIT family; hypothetical protein 323167 10001029 Riean_0297 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044974.1 322439 D 693978 CDS YP_004044975.1 313205798 10001030 323297..324133 1 NC_014738.1 COGs: COG0447 Dihydroxynaphthoic acid synthase; InterPro IPR001753: IPR010198; KEGG: fjo:Fjoh_2784 naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Naphthoate synthase; TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase); 1,4-dihydroxy-2-naphthoate synthase 324133 10001030 Riean_0298 Riemerella anatipestifer ATCC 11845 = DSM 15868 1,4-dihydroxy-2-naphthoate synthase YP_004044975.1 323297 D 693978 CDS YP_004044976.1 313205799 10001031 324164..325090 1 NC_014738.1 COGs: COG1575 1 4-dihydroxy-2-naphthoate octaprenyltransferase; InterPro IPR000537: IPR004657; KEGG: fba:FIC_01439 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphtoate prenyltransferase 325090 10001031 Riean_0299 Riemerella anatipestifer ATCC 11845 = DSM 15868 1,4-dihydroxy-2-naphtoate prenyltransferase YP_004044976.1 324164 D 693978 CDS YP_004044977.1 313205800 10001032 325123..325803 1 NC_014738.1 COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: fba:FIC_01438 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase 325803 10001032 Riean_0300 Riemerella anatipestifer ATCC 11845 = DSM 15868 beta-lactamase YP_004044977.1 325123 D 693978 CDS YP_004044978.1 313205801 10001033 complement(325865..326560) 1 NC_014738.1 KEGG: fps:FP0288 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 326560 10001033 Riean_0301 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044978.1 325865 R 693978 CDS YP_004044979.1 313205802 10001034 complement(326796..327245) 1 NC_014738.1 COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: coc:Coch_1918 transcription activator effector binding; PFAM: transcription activator effector binding; SPTR: Transcription activator effector binding; PFAM: Bacterial transcription activator, effector binding domain; transcription activator effector binding protein 327245 10001034 Riean_0302 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcription activator effector binding protein YP_004044979.1 326796 R 693978 CDS YP_004044980.1 313205803 10001035 complement(327585..328400) 1 NC_014738.1 KEGG: zpr:ZPR_1328 carboxypeptidase-like, regulatory region; SPTR: Probable outer membrane protein; hypothetical protein 328400 10001035 Riean_0303 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044980.1 327585 R 693978 CDS YP_004044981.1 313205804 10001036 328766..329434 1 NC_014738.1 KEGG: cyt:cce_3860 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 329434 10001036 Riean_0304 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044981.1 328766 D 693978 CDS YP_004044982.1 313205805 10001037 complement(329529..331667) 1 NC_014738.1 COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: fba:FIC_02176 peptidyl-dipeptidase I; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; PRIAM: Peptidyl-dipeptidase Dcp; SPTR: Peptidyl-dipeptidase I; PFAM: Peptidase family M3; peptidyl-dipeptidase dcp 331667 10001037 Riean_0305 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidyl-dipeptidase dcp YP_004044982.1 329529 R 693978 CDS YP_004044983.1 313205806 10001038 331828..332115 1 NC_014738.1 COGs: COG2732 Barstar RNAse (barnase) inhibitor; InterPro IPR000468; KEGG: fba:FIC_01786 hypothetical protein; PFAM: Barstar (barnase inhibitor); SPTR: Possible barstar-like protein ribonuclease (Barnase) inhibitor; PFAM: Barstar (barnase inhibitor); barstar (barnase inhibitor) 332115 10001038 Riean_0306 Riemerella anatipestifer ATCC 11845 = DSM 15868 barstar (barnase inhibitor) YP_004044983.1 331828 D 693978 CDS YP_004044984.1 313205807 10001039 complement(332112..333113) 1 NC_014738.1 COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: fba:FIC_01643 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 333113 10001039 Riean_0307 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004044984.1 332112 R 693978 CDS YP_004044985.1 313205808 10001040 complement(333129..334286) 1 NC_014738.1 COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR004114: IPR000241: IPR002052; KEGG: fba:FIC_01642 methyltransferase; PFAM: RNA methylase; THUMP domain-containing protein; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: Probable methylase; PFAM: Putative RNA methylase family UPF0020; THUMP domain; rRNA (guanine-n(2)-)-methyltransferase 334286 10001040 Riean_0308 Riemerella anatipestifer ATCC 11845 = DSM 15868 rRNA (guanine-n(2)-)-methyltransferase YP_004044985.1 333129 R 693978 CDS YP_004044986.1 313205809 10001041 334464..336374 1 NC_014738.1 COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873: IPR011904: IPR020845; KEGG: fba:FIC_01006 acetyl-coenzyme A synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: Acetyl-coenzyme A synthetase; TIGRFAM: acetate/CoA ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; acetyl-coenzyme a synthetase 336374 10001041 Riean_0309 Riemerella anatipestifer ATCC 11845 = DSM 15868 acetyl-coenzyme a synthetase YP_004044986.1 334464 D 693978 CDS YP_004044987.1 313205810 10001042 336409..337167 1 NC_014738.1 InterPro IPR003675; KEGG: sli:Slin_2159 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family; abortive infection protein 337167 10001042 Riean_0310 Riemerella anatipestifer ATCC 11845 = DSM 15868 abortive infection protein YP_004044987.1 336409 D 693978 CDS YP_004044988.1 313205811 10001043 337178..337642 1 NC_014738.1 KEGG: ava:Ava_5025 cadmium resistance transporter; SPTR: Cadmium resistance transporter; hypothetical protein 337642 10001043 Riean_0311 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044988.1 337178 D 693978 CDS YP_004044989.1 313205812 10001045 complement(338287..339951) 1 NC_014738.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014021: IPR001650: IPR014014: IPR011545: IPR 005580: IPR000629: IPR014001; KEGG: fba:FIC_00733 colD-shock DEAD-box protein A; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; dead/deah box helicase domain-containing protein 339951 10001045 Riean_0313 Riemerella anatipestifer ATCC 11845 = DSM 15868 dead/deah box helicase domain-containing protein YP_004044989.1 338287 R 693978 CDS YP_004044990.1 313205813 10001046 complement(340059..340565) 1 NC_014738.1 KEGG: fba:FIC_01281 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 340565 10001046 Riean_0314 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044990.1 340059 R 693978 CDS YP_004044991.1 313205814 10001047 complement(340567..340875) 1 NC_014738.1 KEGG: fba:FIC_01282 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1469); hypothetical protein 340875 10001047 Riean_0315 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044991.1 340567 R 693978 CDS YP_004044992.1 313205815 10001048 complement(340948..341295) 1 NC_014738.1 KEGG: fba:FIC_01283 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 341295 10001048 Riean_0316 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044992.1 340948 R 693978 CDS YP_004044993.1 313205816 10001049 complement(341373..342758) 1 NC_014738.1 InterPro IPR013026; KEGG: fba:FIC_01062 TPR repeat protein; SPTR: TPR repeat protein; tpr repeat protein 342758 10001049 Riean_0317 Riemerella anatipestifer ATCC 11845 = DSM 15868 tpr repeat protein YP_004044993.1 341373 R 693978 CDS YP_004044994.1 313205817 10001050 complement(342794..345319) 1 NC_014738.1 COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205: IPR006691: IPR005743; KEGG: fba:FIC_01061 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: DNA topoisomerase (ATP-hydrolyzing); TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit a 345319 10001050 Riean_0318 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA gyrase subunit a YP_004044994.1 342794 R 693978 CDS YP_004044995.1 313205818 10001051 345441..345755 1 NC_014738.1 KEGG: fba:FIC_01060 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 345755 10001051 Riean_0319 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044995.1 345441 D 693978 CDS YP_004044996.1 313205819 10001052 345881..347815 1 NC_014738.1 COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR001241: IPR000565: IPR003594: IPR013506: IPR 006171: IPR002288: IPR011557: IPR018522; KEGG: fba:FIC_01501 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA gyrase subunit b 347815 10001052 Riean_0320 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA gyrase subunit b YP_004044996.1 345881 D 693978 CDS YP_004044997.1 313205820 10001053 complement(347900..348226) 1 NC_014738.1 COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424: IPR011344; KEGG: hmg:100206795 similar to single-stranded DNA binding protein 1; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); single-strand binding protein 348226 10001053 Riean_0321 Riemerella anatipestifer ATCC 11845 = DSM 15868 single-strand binding protein YP_004044997.1 347900 R 693978 CDS YP_004044998.1 313205821 10001054 348667..349107 1 NC_014738.1 KEGG: pfd:PFDG_00472 hypothetical protein similar to dynein heavy chain; SPTR: Putative uncharacterized protein; hypothetical protein 349107 10001054 Riean_0322 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044998.1 348667 D 693978 CDS YP_004044999.1 313205822 10001055 349082..349240 1 NC_014738.1 KEGG: bbz:BbuZS7_0257 leucyl-tRNA synthetase; SPTR: Leucyl-tRNA synthetase; hypothetical protein 349240 10001055 Riean_0323 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004044999.1 349082 D 693978 CDS YP_004045000.1 313205823 10001056 349255..349602 1 NC_014738.1 KEGG: fjo:Fjoh_0870 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 349602 10001056 Riean_0324 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045000.1 349255 D 693978 CDS YP_004045001.1 313205824 10001057 complement(349606..350682) 1 NC_014738.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: fba:FIC_00607 probable integrase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Probable integrase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; integrase family protein 350682 10001057 Riean_0325 Riemerella anatipestifer ATCC 11845 = DSM 15868 integrase family protein YP_004045001.1 349606 R 693978 CDS YP_004045002.1 313205825 10001058 complement(350695..350898) 1 NC_014738.1 KEGG: fba:FIC_01442 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 350898 10001058 Riean_0326 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045002.1 350695 R 693978 CDS YP_004045003.1 313205826 10001059 350976..352157 1 NC_014738.1 COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090; KEGG: fba:FIC_01341 glutaryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Glutaryl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; acyl-CoA dehydrogenase domain-containing protein 352157 10001059 Riean_0327 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyl-CoA dehydrogenase domain-containing protein YP_004045003.1 350976 D 693978 CDS YP_004045004.1 313205827 10001060 352187..352462 1 NC_014738.1 KEGG: mfs:MFS40622_0560 binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; hypothetical protein 352462 10001060 Riean_0328 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045004.1 352187 D 693978 CDS YP_004045005.1 313205828 10001061 352478..353185 1 NC_014738.1 COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR004165: IPR012792: IPR004163; KEGG: phe:Phep_2918 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SPTR: 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; 3-oxoacid CoA-transferase, a subunit 353185 10001061 Riean_0329 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-oxoacid CoA-transferase, a subunit YP_004045005.1 352478 D 693978 CDS YP_004045006.1 313205829 10001062 353194..353856 1 NC_014738.1 COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165: IPR012791: IPR004164; KEGG: phe:Phep_2917 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SPTR: 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; 3-oxoacid CoA-transferase, b subunit 353856 10001062 Riean_0330 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-oxoacid CoA-transferase, b subunit YP_004045006.1 353194 D 693978 CDS YP_004045007.1 313205830 10001063 353871..356426 1 NC_014738.1 COGs: COG2352 Phosphoenolpyruvate carboxylase; InterPro IPR001449: IPR021135; KEGG: zpr:ZPR_2718 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region; PRIAM: Phosphoenolpyruvate carboxylase; SPTR: Phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 356426 10001063 Riean_0331 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoenolpyruvate carboxylase YP_004045007.1 353871 D 693978 CDS YP_004045008.1 313205831 10001064 356481..357074 1 NC_014738.1 KEGG: lth:KLTH0C07326g KLTH0C07326p; SPTR: ATPase; hypothetical protein 357074 10001064 Riean_0332 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045008.1 356481 D 693978 CDS YP_004045009.1 313205832 10001065 357214..357753 1 NC_014738.1 KEGG: edi:EDI_180220 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 357753 10001065 Riean_0333 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045009.1 357214 D 693978 CDS YP_004045010.1 313205833 10001066 357758..358885 1 NC_014738.1 COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR003042: IPR002938; KEGG: bcz:BCZK1969 hypothetical protein; PFAM: monooxygenase FAD-binding; SPTR: Possible monooxygenase; PFAM: FAD binding domain; monooxygenase faD-binding protein 358885 10001066 Riean_0334 Riemerella anatipestifer ATCC 11845 = DSM 15868 monooxygenase faD-binding protein YP_004045010.1 357758 D 693978 CDS YP_004045011.1 313205834 10001067 complement(359049..360362) 1 NC_014738.1 COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089: IPR004167: IPR001078: IPR003016; KEGG: fba:FIC_01488 dihydrolipoamide acyltransferase component of brancheD-chain alpha-keto acid dehydrogenase complex; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: Possible dihydrolipoyllysine-residue (2-methylpropanoyl)transferase; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; hypothetical protein 360362 10001067 Riean_0335 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045011.1 359049 R 693978 CDS YP_004045012.1 313205835 10001068 complement(360446..361099) 1 NC_014738.1 COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: fba:FIC_00929 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-l-isoaspartate(D-aspartate) o-methyltransferase 361099 10001068 Riean_0336 Riemerella anatipestifer ATCC 11845 = DSM 15868 protein-l-isoaspartate(D-aspartate) o-methyltransferase YP_004045012.1 360446 R 693978 CDS YP_004045013.1 313205836 10001069 complement(361121..362227) 1 NC_014738.1 InterPro IPR000834; KEGG: fba:FIC_01445 peptidase, family M14; PFAM: peptidase M14 carboxypeptidase A; SPTR: Peptidase M14, carboxypeptidase A; PFAM: Zinc carboxypeptidase; peptidase m14 carboxypeptidase a 362227 10001069 Riean_0337 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m14 carboxypeptidase a YP_004045013.1 361121 R 693978 CDS YP_004045014.1 313205837 10001070 362563..363618 1 NC_014738.1 COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: fba:FIC_01446 membrane protein, TerC family; PFAM: Integral membrane protein TerC; SPTR: Membrane protein, TerC family; PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family; integral membrane protein terc 363618 10001070 Riean_0338 Riemerella anatipestifer ATCC 11845 = DSM 15868 integral membrane protein terc YP_004045014.1 362563 D 693978 CDS YP_004045015.1 313205838 10001071 363771..364304 1 NC_014738.1 InterPro IPR001387; KEGG: fba:FIC_01447 bacteriophage CI repressor; PFAM: helix-turn-helix domain protein; SPTR: XRE family transcriptional regulator; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 364304 10001071 Riean_0339 Riemerella anatipestifer ATCC 11845 = DSM 15868 helix-turn-helix domain-containing protein YP_004045015.1 363771 D 693978 CDS YP_004045016.1 313205839 10001072 complement(364312..365262) 1 NC_014738.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: ddr:Deide_3p01670 prolyl aminopeptidase; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; alpha/beta fold family hydrolase 365262 10001072 Riean_0340 Riemerella anatipestifer ATCC 11845 = DSM 15868 alpha/beta fold family hydrolase YP_004045016.1 364312 R 693978 CDS YP_004045017.1 313205840 10001073 complement(365424..366038) 1 NC_014738.1 KEGG: fba:FIC_00857 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 366038 10001073 Riean_0341 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045017.1 365424 R 693978 CDS YP_004045018.1 313205841 10001074 complement(366045..366575) 1 NC_014738.1 KEGG: fba:FIC_00858 hypothetical protein; SPTR: Possible thioredoxin-like protein; hypothetical protein 366575 10001074 Riean_0342 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045018.1 366045 R 693978 CDS YP_004045019.1 313205842 10001075 complement(366587..367057) 1 NC_014738.1 KEGG: fba:FIC_00859 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; hypothetical protein 367057 10001075 Riean_0343 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045019.1 366587 R 693978 CDS YP_004045020.1 313205843 10001076 complement(367094..367579) 1 NC_014738.1 COGs: COG0295 Cytidine deaminase; InterPro IPR002125: IPR016192; KEGG: fba:FIC_02079 cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric; cytidine deaminase 367579 10001076 Riean_0344 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytidine deaminase YP_004045020.1 367094 R 693978 CDS YP_004045021.1 313205844 10001077 complement(367638..368981) 1 NC_014738.1 InterPro IPR000985; KEGG: fba:FIC_00863 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 368981 10001077 Riean_0345 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045021.1 367638 R 693978 CDS YP_004045022.1 313205845 10001078 complement(369028..369426) 1 NC_014738.1 InterPro IPR000182; KEGG: bmd:BMD_3949 GNAT family acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative acetyltransferase; PFAM: Acetyltransferase (GNAT) family; Gcn5-like N-acetyltransferase 369426 10001078 Riean_0346 Riemerella anatipestifer ATCC 11845 = DSM 15868 Gcn5-like N-acetyltransferase YP_004045022.1 369028 R 693978 CDS YP_004045023.1 313205846 10001079 complement(369467..369805) 1 NC_014738.1 COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: fba:FIC_00864 transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator; PFAM: MerR family regulatory protein; transcriptional regulator 369805 10001079 Riean_0347 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator YP_004045023.1 369467 R 693978 CDS YP_004045024.1 313205847 10001080 complement(369864..370841) 1 NC_014738.1 COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: fba:FIC_00785 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: B-glycosyltransferase, glycosyltransferase family 2 protein; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 370841 10001080 Riean_0348 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004045024.1 369864 R 693978 CDS YP_004045025.1 313205848 10001081 complement(370846..371730) 1 NC_014738.1 COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: fba:FIC_00786 lipid A biosynthesis lauroyl acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: Lipid A biosynthesis lauroyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; lipid a biosynthesis acyltransferase 371730 10001081 Riean_0349 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipid a biosynthesis acyltransferase YP_004045025.1 370846 R 693978 CDS YP_004045026.1 313205849 10001082 371829..372380 1 NC_014738.1 KEGG: fba:FIC_00787 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255; hypothetical protein 372380 10001082 Riean_0350 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045026.1 371829 D 693978 CDS YP_004045027.1 313205850 10001083 complement(372423..372770) 1 NC_014738.1 COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660; KEGG: coc:Coch_1881 arsenate reductase; PFAM: arsenate reductase and related; SPTR: Possible arsenate reductase (Glutaredoxin); PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin); arsenate reductase 372770 10001083 Riean_0351 Riemerella anatipestifer ATCC 11845 = DSM 15868 arsenate reductase YP_004045027.1 372423 R 693978 CDS YP_004045028.1 313205851 10001084 complement(372767..374125) 1 NC_014738.1 COGs: COG0124 Histidyl-tRNA synthetase; InterPro IPR006195: IPR004516: IPR002314: IPR004154: IPR 015807; KEGG: fba:FIC_01678 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase 374125 10001084 Riean_0352 Riemerella anatipestifer ATCC 11845 = DSM 15868 histidyl-tRNA synthetase YP_004045028.1 372767 R 693978 CDS YP_004045029.1 313205852 10001085 374273..374878 1 NC_014738.1 COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: fba:FIC_01416 nicotinamidase; PFAM: isochorismatase hydrolase; PRIAM: Nicotinamidase; SPTR: Nicotinamidase; PFAM: Isochorismatase family; nicotinamidase 374878 10001085 Riean_0353 Riemerella anatipestifer ATCC 11845 = DSM 15868 nicotinamidase YP_004045029.1 374273 D 693978 CDS YP_004045030.1 313205853 10001086 complement(374986..375603) 1 NC_014738.1 KEGG: fba:FIC_00796 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 375603 10001086 Riean_0354 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045030.1 374986 R 693978 CDS YP_004045031.1 313205854 10001087 375878..376309 1 NC_014738.1 InterPro IPR016769; KEGG: fba:FIC_01333 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 376309 10001087 Riean_0355 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045031.1 375878 D 693978 CDS YP_004045032.1 313205855 10001088 376335..377144 1 NC_014738.1 COGs: COG0024 Methionine aminopeptidase; InterPro IPR001714: IPR000994: IPR002467; KEGG: fba:FIC_01334 methionine aminopeptidase; PFAM: peptidase M24; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase 377144 10001088 Riean_0356 Riemerella anatipestifer ATCC 11845 = DSM 15868 methionine aminopeptidase YP_004045032.1 376335 D 693978 CDS YP_004045033.1 313205856 10001089 complement(377212..378054) 1 NC_014738.1 COGs: COG0077 Prephenate dehydratase; InterPro IPR001086: IPR018528; KEGG: fba:FIC_00531 prephenate dehydratase; PFAM: prephenate dehydratase; PRIAM: Prephenate dehydratase; SPTR: Prephenate dehydratase; PFAM: Prephenate dehydratase; prephenate dehydratase 378054 10001089 Riean_0357 Riemerella anatipestifer ATCC 11845 = DSM 15868 prephenate dehydratase YP_004045033.1 377212 R 693978 CDS YP_004045034.1 313205857 10001090 complement(378072..378890) 1 NC_014738.1 KEGG: chu:CHU_1135 universal stress protein; SPTR: Universal stress protein family protein; PFAM: Universal stress protein family; hypothetical protein 378890 10001090 Riean_0358 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045034.1 378072 R 693978 CDS YP_004045035.1 313205858 10001091 complement(378894..380375) 1 NC_014738.1 COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006037: IPR006153: IPR018130; KEGG: rbi:RB2501_13614 cell volume regulation protein CvrA; PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; SPTR: Sodium/hydrogen exchanger family/TrkA domain protein; PFAM: Sodium/hydrogen exchanger family; TrkA-C domain; TC 2.A.36; potassium/proton antiporter, cpa1 family 380375 10001091 Riean_0359 Riemerella anatipestifer ATCC 11845 = DSM 15868 potassium/proton antiporter, cpa1 family YP_004045035.1 378894 R 693978 CDS YP_004045036.1 313205859 10001092 complement(380526..383402) 1 NC_014738.1 COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR003335: IPR005791: IPR005665; KEGG: fba:FIC_00644 bifunctional preprotein translocase subunit SecD/SecF; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Bifunctional preprotein translocase subunit SecD/SecF; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein translocase subunit secf; protein translocase subunit secd 383402 10001092 Riean_0360 Riemerella anatipestifer ATCC 11845 = DSM 15868 protein translocase subunit secf; protein translocase subunit secd YP_004045036.1 380526 R 693978 CDS YP_004045037.1 313205860 10001093 complement(383521..384876) 1 NC_014738.1 COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197: IPR010723: IPR004558: IPR006638; KEGG: fba:FIC_00642 coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen dehydrogenase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen iii oxidase 384876 10001093 Riean_0361 Riemerella anatipestifer ATCC 11845 = DSM 15868 oxygen-independent coproporphyrinogen iii oxidase YP_004045037.1 383521 R 693978 CDS YP_004045038.1 313205861 10001094 385047..386498 1 NC_014738.1 COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: cpi:Cpin_6812 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Na+/solute symporter; PFAM: Sodium:solute symporter family; na+/solute symporter 386498 10001094 Riean_0362 Riemerella anatipestifer ATCC 11845 = DSM 15868 na+/solute symporter YP_004045038.1 385047 D 693978 CDS YP_004045039.1 313205862 10001095 386517..387368 1 NC_014738.1 COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: fba:FIC_00506 transketolase, N-terminal section; PFAM: Transketolase domain-containing protein; SPTR: Transketolase; PFAM: Transketolase, thiamine diphosphate binding domain; transketolase domain-containing protein 387368 10001095 Riean_0363 Riemerella anatipestifer ATCC 11845 = DSM 15868 transketolase domain-containing protein YP_004045039.1 386517 D 693978 CDS YP_004045040.1 313205863 10001096 387382..387642 1 NC_014738.1 KEGG: nml:Namu_0692 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 387642 10001096 Riean_0364 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045040.1 387382 D 693978 CDS YP_004045041.1 313205864 10001097 387991..388302 1 NC_014738.1 KEGG: coc:Coch_1942 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 388302 10001097 Riean_0365 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045041.1 387991 D 693978 CDS YP_004045042.1 313205865 10001098 388322..388819 1 NC_014738.1 COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: fba:FIC_01070 secreted protein; PFAM: protein of unknown function DUF336; SPTR: Putative secreted protein; PFAM: Domain of unknown function (DUF336); hypothetical protein 388819 10001098 Riean_0366 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045042.1 388322 D 693978 CDS YP_004045043.1 313205866 10001099 388972..389586 1 NC_014738.1 COGs: COG3059 membrane protein; InterPro IPR007339; KEGG: coc:Coch_1609 protein of unknown function DUF417; PFAM: protein of unknown function DUF417; SPTR: Inner membrane protein YkgB; PFAM: Protein of unknown function, DUF417; hypothetical protein 389586 10001099 Riean_0367 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045043.1 388972 D 693978 CDS YP_004045044.1 313205867 10001100 389619..390110 1 NC_014738.1 COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: pcr:Pcryo_1418 hypothetical protein; PFAM: protein of unknown function DUF336; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF336); hypothetical protein 390110 10001100 Riean_0368 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045044.1 389619 D 693978 CDS YP_004045045.1 313205868 10001101 390189..390599 1 NC_014738.1 COGs: COG2351 Transthyretin-like protein; InterPro IPR000895: IPR014306; KEGG: coc:Coch_0235 hydroxyisourate hydrolase; PFAM: Transthyretin; SMART: Transthyretin; SPTR: 5-hydroxyisourate hydrolase; TIGRFAM: hydroxyisourate hydrolase; PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase; hydroxyisourate hydrolase 390599 10001101 Riean_0369 Riemerella anatipestifer ATCC 11845 = DSM 15868 hydroxyisourate hydrolase YP_004045045.1 390189 D 693978 CDS YP_004045046.1 313205869 10001102 390619..391563 1 NC_014738.1 COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475: IPR005476; KEGG: fba:FIC_00505 transketolase, C-terminal section; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: Transketolase; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase central region 391563 10001102 Riean_0370 Riemerella anatipestifer ATCC 11845 = DSM 15868 transketolase central region YP_004045046.1 390619 D 693978 CDS YP_004045047.1 313205870 10001104 392202..393167 1 NC_014738.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fba:FIC_01513 UDP-glucose 4-epimerase related protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: L-threonine 3-dehydrogenase; PFAM: NAD dependent epimerase/dehydratase family; naD-dependent epimerase/dehydratase 393167 10001104 Riean_0372 Riemerella anatipestifer ATCC 11845 = DSM 15868 naD-dependent epimerase/dehydratase YP_004045047.1 392202 D 693978 CDS YP_004045048.1 313205871 10001105 complement(393225..394349) 1 NC_014738.1 KEGG: pfa:PF13_0162 conserved Plasmodium protein, unknown function; SPTR: Putative uncharacterized protein; hypothetical protein 394349 10001105 Riean_0373 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045048.1 393225 R 693978 CDS YP_004045049.1 313205872 10001106 complement(394459..396087) 1 NC_014738.1 COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844: IPR018370: IPR002423; KEGG: fba:FIC_00260 heat shock protein 60 family chaperone GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; chaperonin groel 396087 10001106 Riean_0374 Riemerella anatipestifer ATCC 11845 = DSM 15868 chaperonin groel YP_004045049.1 394459 R 693978 CDS YP_004045050.1 313205873 10001107 complement(396165..396443) 1 NC_014738.1 COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR001476: IPR020818: IPR018369; KEGG: fba:FIC_00259 heat shock protein 60 family co-chaperone GroES; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; PFAM: Chaperonin 10 Kd subunit; chaperonin cpn10 396443 10001107 Riean_0375 Riemerella anatipestifer ATCC 11845 = DSM 15868 chaperonin cpn10 YP_004045050.1 396165 R 693978 CDS YP_004045051.1 313205874 10001108 complement(396684..397097) 1 NC_014738.1 COGs: COG3187 Heat shock protein; InterPro IPR005184; KEGG: fba:FIC_00922 hypothetical protein; PFAM: protein of unknown function DUF306 Meta and HslJ; SPTR: Putative uncharacterized protein; PFAM: META domain; hypothetical protein 397097 10001108 Riean_0376 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045051.1 396684 R 693978 CDS YP_004045052.1 313205875 10001109 complement(397115..399517) 1 NC_014738.1 COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterPro IPR002547: IPR005121: IPR005146: IPR005147: IPR 004532; KEGG: fba:FIC_00921 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/4 domain protein; t-RNA-binding domain-containing protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: Phenylalanine--tRNA ligase; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta 399517 10001109 Riean_0377 Riemerella anatipestifer ATCC 11845 = DSM 15868 phenylalanyl-tRNA synthetase subunit beta YP_004045052.1 397115 R 693978 CDS YP_004045053.1 313205876 10001110 complement(399656..400786) 1 NC_014738.1 COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: fba:FIC_00920 DNA polymerase III beta subunit; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 400786 10001110 Riean_0378 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA polymerase III subunit beta YP_004045053.1 399656 R 693978 CDS YP_004045054.1 313205877 10001111 complement(400899..401744) 1 NC_014738.1 KEGG: rbi:RB2501_12042 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 401744 10001111 Riean_0379 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045054.1 400899 R 693978 CDS YP_004045055.1 313205878 10001112 complement(401841..402245) 1 NC_014738.1 KEGG: zpr:ZPR_2273 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 402245 10001112 Riean_0380 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045055.1 401841 R 693978 CDS YP_004045056.1 313205879 10001113 complement(402257..404923) 1 NC_014738.1 KEGG: fba:FIC_01342 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 404923 10001113 Riean_0381 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045056.1 402257 R 693978 CDS YP_004045057.1 313205880 10001114 complement(404956..405591) 1 NC_014738.1 COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; InterPro IPR003682; KEGG: fba:FIC_01344 ribosomal RNA small subunit methyltransferase G; PFAM: glucose inhibited division protein; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB; 16S rRNA m(7)g-527 methyltransferase 405591 10001114 Riean_0382 Riemerella anatipestifer ATCC 11845 = DSM 15868 16S rRNA m(7)g-527 methyltransferase YP_004045057.1 404956 R 693978 CDS YP_004045058.1 313205881 10001115 complement(405591..405941) 1 NC_014738.1 InterPro IPR004360; KEGG: bay:RBAM_011160 fosfomycin resistance protein FosB; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative metallothiol transferase FosB; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase 405941 10001115 Riean_0383 Riemerella anatipestifer ATCC 11845 = DSM 15868 glyoxalase/bleomycin resistance protein/dioxygenase YP_004045058.1 405591 R 693978 CDS YP_004045059.1 313205882 10001116 complement(405946..406965) 1 NC_014738.1 COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR008089: IPR001509: IPR005886; KEGG: fba:FIC_00598 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; UDP-glucose 4-epimerase 406965 10001116 Riean_0384 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-glucose 4-epimerase YP_004045059.1 405946 R 693978 CDS YP_004045060.1 313205883 10001117 complement(406975..408102) 1 NC_014738.1 COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fba:FIC_00597 pigmentation and extracellular proteinase regulator; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; degt/dnrj/eryc1/strs aminotransferase 408102 10001117 Riean_0385 Riemerella anatipestifer ATCC 11845 = DSM 15868 degt/dnrj/eryc1/strs aminotransferase YP_004045060.1 406975 R 693978 CDS YP_004045061.1 313205884 10001118 complement(408178..410607) 1 NC_014738.1 COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017: IPR005475: IPR005476; KEGG: fba:FIC_01046 transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; dehydrogenase E1 component; SPTR: Pyruvate oxoisovalerate dehydrogenase alpha and beta fusion; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase domain-containing protein 410607 10001118 Riean_0386 Riemerella anatipestifer ATCC 11845 = DSM 15868 transketolase domain-containing protein YP_004045061.1 408178 R 693978 CDS YP_004045062.1 313205885 10001119 411080..413944 1 NC_014738.1 COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863: IPR001431; KEGG: fba:FIC_00581 M16 family peptidase; PFAM: peptidase M16 domain protein; SPTR: M16 family peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase m16 domain-containing protein 413944 10001119 Riean_0387 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m16 domain-containing protein YP_004045062.1 411080 D 693978 CDS YP_004045063.1 313205886 10001120 complement(414010..416130) 1 NC_014738.1 InterPro IPR019500; KEGG: fba:FIC_00583 hypothetical protein; PFAM: Peptidase S46; SPTR: Putative uncharacterized protein; PFAM: Peptidase S46; dipeptidyl-peptidase 7 416130 10001120 Riean_0388 Riemerella anatipestifer ATCC 11845 = DSM 15868 dipeptidyl-peptidase 7 YP_004045063.1 414010 R 693978 CDS YP_004045064.1 313205887 10001121 complement(416211..416642) 1 NC_014738.1 KEGG: fba:FIC_00806 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 416642 10001121 Riean_0389 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045064.1 416211 R 693978 CDS YP_004045065.1 313205888 10001123 416843..417889 1 NC_014738.1 COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: fba:FIC_01617 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: Periplasmic binding protein; PFAM: Periplasmic binding protein; periplasmic binding protein 417889 10001123 Riean_0390 Riemerella anatipestifer ATCC 11845 = DSM 15868 periplasmic binding protein YP_004045065.1 416843 D 693978 CDS YP_004045066.1 313205889 10001124 417973..419400 1 NC_014738.1 COGs: COG0015 Adenylosuccinate lyase; InterPro IPR000362: IPR019468: IPR004769: IPR020557; KEGG: fba:FIC_00789 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase-like; fumarate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase 419400 10001124 Riean_0391 Riemerella anatipestifer ATCC 11845 = DSM 15868 adenylosuccinate lyase YP_004045066.1 417973 D 693978 CDS YP_004045067.1 313205890 10001125 complement(419506..420264) 1 NC_014738.1 KEGG: tgo:TGME49_094650 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 420264 10001125 Riean_0392 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045067.1 419506 R 693978 CDS YP_004045068.1 313205891 10001126 420401..422434 1 NC_014738.1 COGs: COG0143 Methionyl-tRNA synthetase; InterPro IPR014758: IPR002547: IPR015413: IPR002304: IPR 004495: IPR001412; KEGG: fba:FIC_00540 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein; SPTR: Methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; methionyl-tRNA synthetase 422434 10001126 Riean_0393 Riemerella anatipestifer ATCC 11845 = DSM 15868 methionyl-tRNA synthetase YP_004045068.1 420401 D 693978 CDS YP_004045069.1 313205892 10001127 422595..423725 1 NC_014738.1 COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090: IPR006089; KEGG: fba:FIC_00861 acyl-CoA dehydrogenase, short-chain specific; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Butyryl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; acyl-CoA dehydrogenase domain-containing protein 423725 10001127 Riean_0394 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyl-CoA dehydrogenase domain-containing protein YP_004045069.1 422595 D 693978 CDS YP_004045070.1 313205893 10001128 423875..425224 1 NC_014738.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014021: IPR001650: IPR014014: IPR011545: IPR 014001; KEGG: fba:FIC_00558 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD/DEAH box helicase domain-containing protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; dead/deah box helicase domain-containing protein 425224 10001128 Riean_0395 Riemerella anatipestifer ATCC 11845 = DSM 15868 dead/deah box helicase domain-containing protein YP_004045070.1 423875 D 693978 CDS YP_004045071.1 313205894 10001129 complement(425285..426451) 1 NC_014738.1 COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase family; InterPro IPR001670: IPR018211; KEGG: cpi:Cpin_1126 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: Possible alcohol dehydrogenase (NADP(+)); PFAM: Iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 426451 10001129 Riean_0396 Riemerella anatipestifer ATCC 11845 = DSM 15868 iron-containing alcohol dehydrogenase YP_004045071.1 425285 R 693978 CDS YP_004045072.1 313205895 10001130 complement(426514..427653) 1 NC_014738.1 COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090: IPR006089; KEGG: fba:FIC_01571 acyl-CoA dehydrogenase, short-chain specific; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase family protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; acyl-CoA dehydrogenase domain-containing protein 427653 10001130 Riean_0397 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyl-CoA dehydrogenase domain-containing protein YP_004045072.1 426514 R 693978 CDS YP_004045073.1 313205896 10001131 427778..429562 1 NC_014738.1 COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR020459: IPR000873: IPR020845; KEGG: fba:FIC_01572 long-chain-fatty-aciD--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Long-chain-fatty-aciD--CoA ligase; PFAM: AMP-binding enzyme; amp-dependent synthetase and ligase 429562 10001131 Riean_0398 Riemerella anatipestifer ATCC 11845 = DSM 15868 amp-dependent synthetase and ligase YP_004045073.1 427778 D 693978 CDS YP_004045074.1 313205897 10001132 complement(429615..431204) 1 NC_014738.1 COGs: COG4108 Peptide chain release factor RF-3; InterPro IPR000795: IPR004161: IPR004548: IPR005225; KEGG: fba:FIC_01568 peptide chain release factor 3; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; SPTR: Peptide chain release factor RF3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; peptide chain release factor 3 (brf-3) 431204 10001132 Riean_0399 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptide chain release factor 3 (brf-3) YP_004045074.1 429615 R 693978 CDS YP_004045075.1 313205898 10001133 complement(431273..432115) 1 NC_014738.1 InterPro IPR003091: IPR005821; KEGG: fba:FIC_01348 potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family; PFAM: Ion transport protein; SPTR: Potassium channel protein; PFAM: Ion transport protein; ion transport protein 432115 10001133 Riean_0400 Riemerella anatipestifer ATCC 11845 = DSM 15868 ion transport protein YP_004045075.1 431273 R 693978 CDS YP_004045076.1 313205899 10001134 432183..433280 1 NC_014738.1 COGs: COG3323 conserved hypothetical protein; InterPro IPR017221: IPR002678; KEGG: fba:FIC_01347 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: Protein of hypothetical function DUF34; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; hypothetical protein 433280 10001134 Riean_0401 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045076.1 432183 D 693978 CDS YP_004045077.1 313205900 10001135 433285..434064 1 NC_014738.1 COGs: COG1579 Zn-ribbon protein possibly nucleic aciD-binding; InterPro IPR003743; KEGG: fba:FIC_01346 Zn-ribbon protein, possibly nucleic aciD-binding; PFAM: protein of unknown function DUF164; SPTR: Protein of hypothetical function DUF164; PFAM: Putative zinc ribbon domain; hypothetical protein 434064 10001135 Riean_0402 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045077.1 433285 D 693978 CDS YP_004045078.1 313205901 10001136 434166..436151 1 NC_014738.1 COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: fba:FIC_01174 prolyl oligopeptidase family protein; SPTR: Peptidase S9 prolyl oligopeptidase; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; WD40-like Beta Propeller Repeat; prolyl oligopeptidase family protein 436151 10001136 Riean_0403 Riemerella anatipestifer ATCC 11845 = DSM 15868 prolyl oligopeptidase family protein YP_004045078.1 434166 D 693978 CDS YP_004045079.1 313205902 10001137 complement(436460..436885) 1 NC_014738.1 KEGG: pyo:PY00683 hypothetical protein; SPTR: Probable outer membrane protein; hypothetical protein 436885 10001137 Riean_0404 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045079.1 436460 R 693978 CDS YP_004045080.1 313205903 10001138 complement(436939..437325) 1 NC_014738.1 KEGG: zpr:ZPR_1328 carboxypeptidase-like, regulatory region; SPTR: Probable outer membrane protein; hypothetical protein 437325 10001138 Riean_0405 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045080.1 436939 R 693978 CDS YP_004045081.1 313205904 10001139 complement(437417..438499) 1 NC_014738.1 COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); InterPro IPR003395: IPR001238: IPR018078; KEGG: fba:FIC_01613 DNA recombination and repair protein RecF; PFAM: SMC domain protein; SPTR: DNA replication and repair protein recF; TIGRFAM: DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; DNA replication and repair protein recf 438499 10001139 Riean_0406 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA replication and repair protein recf YP_004045081.1 437417 R 693978 CDS YP_004045082.1 313205905 10001140 complement(438514..439215) 1 NC_014738.1 KEGG: fba:FIC_01612 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 439215 10001140 Riean_0407 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045082.1 438514 R 693978 CDS YP_004045083.1 313205906 10001141 complement(439280..442453) 1 NC_014738.1 COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541: IPR017562; KEGG: fba:FIC_00930 cytochrome c-type biogenesis protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c biogenesis protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: Cytochrome C assembly protein; ResB-like family; TIGRFAM: cytochrome c-type biogenesis protein CcsB; cytochrome c-type biogenesis protein ccsb 442453 10001141 Riean_0408 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytochrome c-type biogenesis protein ccsb YP_004045083.1 439280 R 693978 CDS YP_004045084.1 313205907 10001142 complement(442597..443277) 1 NC_014738.1 COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; InterPro IPR002649: IPR016009; KEGG: fba:FIC_01840 tRNA (guanine37-N1) -methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (guanine37-n(1)-) methyltransferase 443277 10001142 Riean_0409 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA (guanine37-n(1)-) methyltransferase YP_004045084.1 442597 R 693978 CDS YP_004045085.1 313205908 10001143 complement(443274..444620) 1 NC_014738.1 COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: fba:FIC_01841 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: NADH dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; faD-dependent pyridine nucleotide-disulfide oxidoreductase 444620 10001143 Riean_0410 Riemerella anatipestifer ATCC 11845 = DSM 15868 faD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004045085.1 443274 R 693978 CDS YP_004045086.1 313205909 10001144 complement(444664..445896) 1 NC_014738.1 COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089: IPR004167: IPR001078: IPR006255; KEGG: fba:FIC_00781 dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: Dihydrolipoyllysine-residue succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); 2-oxoglutarate dehydrogenase, e2 subunit, dihydrolipoamide succinyltransferase 445896 10001144 Riean_0411 Riemerella anatipestifer ATCC 11845 = DSM 15868 2-oxoglutarate dehydrogenase, e2 subunit, dihydrolipoamide succinyltransferase YP_004045086.1 444664 R 693978 CDS YP_004045087.1 313205910 10001145 complement(445951..448710) 1 NC_014738.1 COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR011603: IPR001017: IPR005475: IPR020003; KEGG: fba:FIC_00780 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component; PRIAM: Oxoglutarate dehydrogenase (succinyl-transferring); SPTR: Oxoglutarate dehydrogenase (Succinyl-transferring); TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; 2-oxoglutarate dehydrogenase, e1 subunit 448710 10001145 Riean_0412 Riemerella anatipestifer ATCC 11845 = DSM 15868 2-oxoglutarate dehydrogenase, e1 subunit YP_004045087.1 445951 R 693978 CDS YP_004045088.1 313205911 10001146 complement(448826..449860) 1 NC_014738.1 InterPro IPR019587; KEGG: fba:FIC_00779 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport; polyketide cyclase/dehydrase 449860 10001146 Riean_0413 Riemerella anatipestifer ATCC 11845 = DSM 15868 polyketide cyclase/dehydrase YP_004045088.1 448826 R 693978 CDS YP_004045089.1 313205912 10001147 complement(449871..450158) 1 NC_014738.1 InterPro IPR003769; KEGG: fba:FIC_00832 hypothetical protein; PFAM: ATP-dependent Clp protease adaptor protein ClpS; SPTR: Putative uncharacterized protein; PFAM: ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent clp protease adaptor protein clps 450158 10001147 Riean_0414 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-dependent clp protease adaptor protein clps YP_004045089.1 449871 R 693978 CDS YP_004045090.1 313205913 10001148 complement(450180..451532) 1 NC_014738.1 COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550: IPR005170; KEGG: fba:FIC_00831 conserved hypothetical protein; possible transport protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SPTR: TlyC family hemolysin; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein 451532 10001148 Riean_0415 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045090.1 450180 R 693978 CDS YP_004045091.1 313205914 10001149 complement(451695..452564) 1 NC_014738.1 COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: fba:FIC_00830 ATP synthase gamma chain; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase F1 subunit gamma 452564 10001149 Riean_0416 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP synthase F1 subunit gamma YP_004045091.1 451695 R 693978 CDS YP_004045092.1 313205915 10001150 complement(452636..454213) 1 NC_014738.1 COGs: COG0056 F0F1-type ATP synthase alpha subunit; InterPro IPR004100: IPR000194: IPR000793: IPR005294: IPR 020003; KEGG: fba:FIC_00829 F0F1 ATP synthase subunit alpha; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SPTR: ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; ATP synthase F1 subunit alpha 454213 10001150 Riean_0417 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP synthase F1 subunit alpha YP_004045092.1 452636 R 693978 CDS YP_004045093.1 313205916 10001151 complement(454231..454770) 1 NC_014738.1 COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); InterPro IPR000711; KEGG: fba:FIC_00828 ATP synthase delta chain; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; SPTR: H(+)-transporting ATPase F(1) delta subunit; TIGRFAM: ATP synthase F1, delta subunit; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; F1 ATP synthase subunit delta 454770 10001151 Riean_0418 Riemerella anatipestifer ATCC 11845 = DSM 15868 F1 ATP synthase subunit delta YP_004045093.1 454231 R 693978 CDS YP_004045094.1 313205917 10001152 complement(454773..455267) 1 NC_014738.1 COGs: COG0711 F0F1-type ATP synthase subunit b; InterPro IPR002146: IPR005864; KEGG: fba:FIC_00827 ATP synthase B chain; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: ATP synthase subunit b; TIGRFAM: ATP synthase F0, B subunit; PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; ATP synthase f0 subcomplex b subunit 455267 10001152 Riean_0419 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP synthase f0 subcomplex b subunit YP_004045094.1 454773 R 693978 CDS YP_004045095.1 313205918 10001153 complement(455364..455573) 1 NC_014738.1 InterPro IPR000454: IPR002379: IPR005953: IPR020537; KEGG: phe:Phep_0393 ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: Putative uncharacterized protein; TIGRFAM: ATP synthase F0, C subunit; PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; ATP synthase f0 subcomplex c subunit 455573 10001153 Riean_0420 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP synthase f0 subcomplex c subunit YP_004045095.1 455364 R 693978 CDS YP_004045096.1 313205919 10001154 complement(455627..456685) 1 NC_014738.1 COGs: COG0356 F0F1-type ATP synthase subunit a; InterPro IPR000568; KEGG: rbi:RB2501_06565 ATP synthase A subunit; PFAM: H+transporting two-sector ATPase A subunit; SPTR: ATP synthase subunit a; TIGRFAM: ATP synthase F0, A subunit; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); ATP synthase f0 subcomplex a subunit 456685 10001154 Riean_0421 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP synthase f0 subcomplex a subunit YP_004045096.1 455627 R 693978 CDS YP_004045097.1 313205920 10001155 complement(456758..457126) 1 NC_014738.1 KEGG: cbu:CBU_0833 ABC transporter permease/ATP-binding protein; SPTR: NADH-ubiquinone oxidoreductase chain 6; hypothetical protein 457126 10001155 Riean_0422 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045097.1 456758 R 693978 CDS YP_004045098.1 313205921 10001156 457260..458477 1 NC_014738.1 COGs: COG2814 Arabinose efflux permease; InterPro IPR001958: IPR011701: IPR005829; KEGG: fba:FIC_00645 tetracycline efflux protein TetA; PFAM: major facilitator superfamily MFS_1; SPTR: Tetracycline efflux protein TetA; PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; major facilitator superfamily protein 458477 10001156 Riean_0423 Riemerella anatipestifer ATCC 11845 = DSM 15868 major facilitator superfamily protein YP_004045098.1 457260 D 693978 CDS YP_004045099.1 313205922 10001157 458516..458857 1 NC_014738.1 COGs: COG1826 Sec-independent protein secretion pathway components; InterPro IPR003369: IPR006312; KEGG: fba:FIC_00646 hypothetical protein; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Putative uncharacterized protein; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin arginine-targeting protein translocase TatB; twin-arginine translocation protein, tata/e family subunit 458857 10001157 Riean_0424 Riemerella anatipestifer ATCC 11845 = DSM 15868 twin-arginine translocation protein, tata/e family subunit YP_004045099.1 458516 D 693978 CDS YP_004045100.1 313205923 10001158 458864..459424 1 NC_014738.1 InterPro IPR000326; KEGG: fba:FIC_00647 membrane-associated phospholipid phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: Putative membrane-associated phospholipid phosphatase; PFAM: PAP2 superfamily; phosphoesterase pa-phosphatase-like protein 459424 10001158 Riean_0425 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoesterase pa-phosphatase-like protein YP_004045100.1 458864 D 693978 CDS YP_004045101.1 313205924 10001160 complement(459696..460373) 1 NC_014738.1 KEGG: fba:FIC_00477 DNA recombination and repair protein RecO; SPTR: DNA repair protein; PFAM: Recombination protein O N terminal; hypothetical protein 460373 10001160 Riean_0426 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045101.1 459696 R 693978 CDS YP_004045102.1 313205925 10001161 complement(460385..462619) 1 NC_014738.1 InterPro IPR011110; KEGG: fba:FIC_00476 immunoreactive 84 kDa antigen PG93; SPTR: Immunoreactive 84 kDa antigen PG93; PFAM: Two component regulator propeller; immunoreactive 84 kda antigen pg93 462619 10001161 Riean_0427 Riemerella anatipestifer ATCC 11845 = DSM 15868 immunoreactive 84 kda antigen pg93 YP_004045102.1 460385 R 693978 CDS YP_004045103.1 313205926 10001162 complement(462621..463568) 1 NC_014738.1 COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR006179: IPR004843: IPR006146; KEGG: fba:FIC_00475 5'-nucleotidase; PFAM: metallophosphoesterase; SPTR: 5'-nucleotidase; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 463568 10001162 Riean_0428 Riemerella anatipestifer ATCC 11845 = DSM 15868 metallophosphoesterase YP_004045103.1 462621 R 693978 CDS YP_004045104.1 313205927 10001163 complement(463576..464328) 1 NC_014738.1 COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR006179: IPR008334; KEGG: fba:FIC_00474 5'-nucleotidase; PFAM: 5'-Nucleotidase domain-containing protein; SPTR: 5'-nucleotidase; PFAM: 5'-nucleotidase, C-terminal domain; 5'-nucleotidase domain-containing protein 464328 10001163 Riean_0429 Riemerella anatipestifer ATCC 11845 = DSM 15868 5'-nucleotidase domain-containing protein YP_004045104.1 463576 R 693978 CDS YP_004045105.1 313205928 10001164 464699..465214 1 NC_014738.1 COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR008332: IPR014048: IPR001497; KEGG: fba:FIC_01039 methylateD-DNA--protein-cysteine methyltransferase; PFAM: MethylateD-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; SPTR: Possible methylateD-DNA--[protein]-cysteine S-methyltransferase; TIGRFAM: methylateD-DNA/protein-cysteine methyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; methylateD-DNA/protein- cysteinemethyltransferase 465214 10001164 Riean_0430 Riemerella anatipestifer ATCC 11845 = DSM 15868 methylateD-DNA/protein- cysteinemethyltransferase YP_004045105.1 464699 D 693978 CDS YP_004045106.1 313205929 10001165 complement(465247..467841) 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fba:FIC_00599 TonB-dependent receptor, putative; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; tonb-dependent receptor plug 467841 10001165 Riean_0431 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004045106.1 465247 R 693978 CDS YP_004045107.1 313205930 10001166 complement(467900..468925) 1 NC_014738.1 COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: fba:FIC_00600 aminodeoxychorismate lyase; PFAM: aminodeoxychorismate lyase; SPTR: Aminodeoxychorismate lyase; PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; aminodeoxychorismate lyase 468925 10001166 Riean_0432 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminodeoxychorismate lyase YP_004045107.1 467900 R 693978 CDS YP_004045108.1 313205931 10001167 complement(468935..469696) 1 NC_014738.1 COGs: COG0253 Diaminopimelate epimerase; InterPro IPR001653; KEGG: fba:FIC_00601 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; PRIAM: Diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase 469696 10001167 Riean_0433 Riemerella anatipestifer ATCC 11845 = DSM 15868 diaminopimelate epimerase YP_004045108.1 468935 R 693978 CDS YP_004045109.1 313205932 10001168 469945..471615 1 NC_014738.1 COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020060: IPR020058: IPR020059: IPR004514: IPR 001412; KEGG: fba:FIC_01899 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; SPTR: Glutamine--tRNA ligase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 471615 10001168 Riean_0434 Riemerella anatipestifer ATCC 11845 = DSM 15868 glutaminyl-tRNA synthetase YP_004045109.1 469945 D 693978 CDS YP_004045110.1 313205933 10001169 complement(471692..472627) 1 NC_014738.1 InterPro IPR000537; KEGG: fba:FIC_00968 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate-octaprenyltransferase; PFAM: UbiA prenyltransferase family; ubia prenyltransferase 472627 10001169 Riean_0435 Riemerella anatipestifer ATCC 11845 = DSM 15868 ubia prenyltransferase YP_004045110.1 471692 R 693978 CDS YP_004045111.1 313205934 10001170 complement(472646..473572) 1 NC_014738.1 COGs: COG1577 Mevalonate kinase; InterPro IPR001174: IPR006204; KEGG: fba:FIC_00967 mevalonate kinase; PFAM: GHMP kinase; SPTR: Mevalonate kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; ghmp kinase 473572 10001170 Riean_0436 Riemerella anatipestifer ATCC 11845 = DSM 15868 ghmp kinase YP_004045111.1 472646 R 693978 CDS YP_004045112.1 313205935 10001171 complement(473656..474228) 1 NC_014738.1 COGs: COG2949 Uncharacterized membrane protein; InterPro IPR003848; KEGG: fba:FIC_00952 SanA protein; PFAM: protein of unknown function DUF218; SPTR: Membrane protein; PFAM: DUF218 domain; hypothetical protein 474228 10001171 Riean_0437 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045112.1 473656 R 693978 CDS YP_004045113.1 313205936 10001172 complement(474267..475367) 1 NC_014738.1 COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR001834: IPR001041: IPR017927: IPR008333: IPR 001433: IPR006058: IPR005479; KEGG: fba:FIC_00951 phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; ferredoxin; SPTR: Phenylacetate-CoA oxygenase, PaaK subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; oxidoreductase fad/nad(p)-binding domain-containing protein 475367 10001172 Riean_0438 Riemerella anatipestifer ATCC 11845 = DSM 15868 oxidoreductase fad/nad(p)-binding domain-containing protein YP_004045113.1 474267 R 693978 CDS YP_004045114.1 313205937 10001173 475395..475934 1 NC_014738.1 InterPro IPR017936: IPR013740: IPR017937; KEGG: fba:FIC_00950 thiol:disulfide interchange protein TlpA; PFAM: Redoxin domain protein; SPTR: Thiol:disulfide interchange protein tlpA; PFAM: AhpC/TSA family; redoxin domain-containing protein 475934 10001173 Riean_0439 Riemerella anatipestifer ATCC 11845 = DSM 15868 redoxin domain-containing protein YP_004045114.1 475395 D 693978 CDS YP_004045115.1 313205938 10001174 475939..476916 1 NC_014738.1 COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: fba:FIC_00949 transport system permease protein; PFAM: transport system permease protein; SPTR: Transport system permease protein; PFAM: FecCD transport family; transport system permease 476916 10001174 Riean_0440 Riemerella anatipestifer ATCC 11845 = DSM 15868 transport system permease YP_004045115.1 475939 D 693978 CDS YP_004045116.1 313205939 10001175 476920..477822 1 NC_014738.1 COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR003593; KEGG: fba:FIC_00948 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter 477822 10001175 Riean_0441 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045116.1 476920 D 693978 CDS YP_004045117.1 313205940 10001177 complement(478129..481311) 1 NC_014738.1 COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR005483: IPR011761: IPR005481: IPR005479: IPR 005480: IPR011607: IPR006275: IPR000169; KEGG: fba:FIC_01018 carbamoyl-phosphate synthase large chain; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: Carbamoyl-phosphate synthase (Glutamine-hydrolyzing); TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 481311 10001177 Riean_0443 Riemerella anatipestifer ATCC 11845 = DSM 15868 carbamoyl-phosphate synthase large subunit YP_004045117.1 478129 R 693978 CDS YP_004045118.1 313205941 10001178 complement(481550..482026) 1 NC_014738.1 KEGG: coc:Coch_1014 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 482026 10001178 Riean_0444 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045118.1 481550 R 693978 CDS YP_004045119.1 313205942 10001179 complement(482653..483081) 1 NC_014738.1 KEGG: fjo:Fjoh_1903 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 483081 10001179 Riean_0445 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045119.1 482653 R 693978 CDS YP_004045120.1 313205943 10001180 complement(483098..484174) 1 NC_014738.1 COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR001317: IPR011702: IPR006220: IPR017926: IPR 002474: IPR000991: IPR006274; KEGG: fba:FIC_01016 carbamoyl-phosphate synthase small chain; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; SPTR: Carbamoyl-phosphate synthase (Glutamine-hydrolyzing); TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 484174 10001180 Riean_0446 Riemerella anatipestifer ATCC 11845 = DSM 15868 carbamoyl-phosphate synthase small subunit YP_004045120.1 483098 R 693978 CDS YP_004045121.1 313205944 10001181 complement(484238..485134) 1 NC_014738.1 COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR002082: IPR006130: IPR006132: IPR006131; KEGG: fba:FIC_01015 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; SPTR: Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase 485134 10001181 Riean_0447 Riemerella anatipestifer ATCC 11845 = DSM 15868 aspartate carbamoyltransferase YP_004045121.1 484238 R 693978 CDS YP_004045122.1 313205945 10001182 485409..486425 1 NC_014738.1 COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034: IPR020827; KEGG: fba:FIC_00495 L-asparaginase; PFAM: Asparaginase/glutaminase; PRIAM: 1-alkyl-2-acetylglycerophosphocholine esterase; SPTR: L-asparaginase; PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I; 1-alkyl-2-acetylglycerophosphocholine esterase 486425 10001182 Riean_0448 Riemerella anatipestifer ATCC 11845 = DSM 15868 1-alkyl-2-acetylglycerophosphocholine esterase YP_004045122.1 485409 D 693978 CDS YP_004045123.1 313205946 10001184 complement(487585..487722) 1 NC_014738.1 hypothetical protein 487722 10001184 Riean_0449 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045123.1 487585 R 693978 CDS YP_004045124.1 313205947 10001185 complement(487845..488036) 1 NC_014738.1 COGs: COG1278 Cold shock protein; InterPro IPR002059: IPR012156: IPR019844: IPR011129; KEGG: fba:FIC_01546 cold shock protein CspA; PFAM: ColD-shock protein DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein CspA; PFAM: 'ColD-shock' DNA-binding domain; colD-shock DNA-binding protein family 488036 10001185 Riean_0450 Riemerella anatipestifer ATCC 11845 = DSM 15868 colD-shock DNA-binding protein family YP_004045124.1 487845 R 693978 CDS YP_004045125.1 313205948 10001186 complement(488069..488506) 1 NC_014738.1 InterPro IPR002059: IPR011129; KEGG: cpi:Cpin_5168 colD-shock DNA-binding domain protein; PFAM: ColD-shock protein DNA-binding; SMART: Cold shock protein; SPTR: ColD-shock DNA-binding protein family protein; PFAM: 'ColD-shock' DNA-binding domain; colD-shock DNA-binding protein family 488506 10001186 Riean_0451 Riemerella anatipestifer ATCC 11845 = DSM 15868 colD-shock DNA-binding protein family YP_004045125.1 488069 R 693978 CDS YP_004045126.1 313205949 10001187 complement(488522..489637) 1 NC_014738.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014021: IPR001650: IPR014014: IPR011545: IPR 000629: IPR014001; KEGG: phe:Phep_3476 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; dead/deah box helicase domain-containing protein 489637 10001187 Riean_0452 Riemerella anatipestifer ATCC 11845 = DSM 15868 dead/deah box helicase domain-containing protein YP_004045126.1 488522 R 693978 CDS YP_004045127.1 313205950 10001188 complement(489973..491010) 1 NC_014738.1 COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR004383: IPR007197: IPR006638; KEGG: fba:FIC_01179 radical SAM enzyme, Cfr family protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family; 23S rRNA m(2)a-2503 methyltransferase 491010 10001188 Riean_0453 Riemerella anatipestifer ATCC 11845 = DSM 15868 23S rRNA m(2)a-2503 methyltransferase YP_004045127.1 489973 R 693978 CDS YP_004045128.1 313205951 10001189 complement(491098..492147) 1 NC_014738.1 COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: fba:FIC_01178 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; s-adenosylmethionine--tRNA ribosyltransferase-isomerase 492147 10001189 Riean_0454 Riemerella anatipestifer ATCC 11845 = DSM 15868 s-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_004045128.1 491098 R 693978 CDS YP_004045129.1 313205952 10001190 492394..493356 1 NC_014738.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fba:FIC_00928 oxidoreductase, Gfo/Idh/MocA family; PFAM: oxidoreductase domain protein; SPTR: Gfo/Idh/MocA family oxidoreductase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 493356 10001190 Riean_0455 Riemerella anatipestifer ATCC 11845 = DSM 15868 oxidoreductase domain-containing protein YP_004045129.1 492394 D 693978 CDS YP_004045130.1 313205953 10001191 493508..493918 1 NC_014738.1 KEGG: cby:CLM_2504 tail fiber protein; SPTR: Haloacid dehalogenase-like hydrolase; tail fiber protein 493918 10001191 Riean_0456 Riemerella anatipestifer ATCC 11845 = DSM 15868 tail fiber protein YP_004045130.1 493508 D 693978 CDS YP_004045131.1 313205954 10001192 494308..495369 1 NC_014738.1 KEGG: pfa:PF13_0210 conserved Plasmodium protein, unknown function; SPTR: Putative uncharacterized protein; hypothetical protein 495369 10001192 Riean_0457 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045131.1 494308 D 693978 CDS YP_004045132.1 313205955 10001193 495442..496404 1 NC_014738.1 KEGG: gfo:GFO_2571 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 496404 10001193 Riean_0458 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045132.1 495442 D 693978 CDS YP_004045133.1 313205956 10001194 496480..496644 1 NC_014738.1 hypothetical protein 496644 10001194 Riean_0459 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045133.1 496480 D 693978 CDS YP_004045134.1 313205957 10001195 complement(496641..497138) 1 NC_014738.1 COGs: COG0359 Ribosomal protein L9; InterPro IPR020070: IPR020069: IPR020594; KEGG: fba:FIC_01518 LSU ribosomal protein L9p; PFAM: Ribosomal protein L9-like; SPTR: 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein l9p 497138 10001195 Riean_0460 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l9p YP_004045134.1 496641 R 693978 CDS YP_004045135.1 313205958 10001196 complement(497257..497559) 1 NC_014738.1 COGs: COG0238 Ribosomal protein S18; InterPro IPR001648; KEGG: fba:FIC_01517 SSU ribosomal protein S18p; PFAM: ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein s18p 497559 10001196 Riean_0461 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein s18p YP_004045135.1 497257 R 693978 CDS YP_004045136.1 313205959 10001197 complement(497585..497926) 1 NC_014738.1 COGs: COG0360 Ribosomal protein S6; InterPro IPR020814: IPR000529; KEGG: fba:FIC_01516 SSU ribosomal protein S6p; PFAM: Ribosomal protein S6, bacterial-like; SPTR: 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein s6p 497926 10001197 Riean_0462 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein s6p YP_004045136.1 497585 R 693978 CDS YP_004045137.1 313205960 10001198 complement(498002..499423) 1 NC_014738.1 COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807; KEGG: fba:FIC_01519 chloride channel protein; PFAM: Cl- channel voltage-gated family protein; SPTR: Chloride channel protein; PFAM: Voltage gated chloride channel; cl- channel voltage-gated family protein 499423 10001198 Riean_0463 Riemerella anatipestifer ATCC 11845 = DSM 15868 cl- channel voltage-gated family protein YP_004045137.1 498002 R 693978 CDS YP_004045138.1 313205961 10001199 complement(499558..501465) 1 NC_014738.1 COGs: COG0443 Molecular chaperone; InterPro IPR001023: IPR013126: IPR012725: IPR018181; KEGG: fba:FIC_02102 chaperone protein DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: chaperone protein DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; chaperone protein dnak 501465 10001199 Riean_0464 Riemerella anatipestifer ATCC 11845 = DSM 15868 chaperone protein dnak YP_004045138.1 499558 R 693978 CDS YP_004045139.1 313205962 10001200 501709..502866 1 NC_014738.1 InterPro IPR010359; KEGG: mar:MAE_50260 hypothetical protein; PFAM: protein of unknown function DUF955; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF955); hypothetical protein 502866 10001200 Riean_0465 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045139.1 501709 D 693978 CDS YP_004045140.1 313205963 10001201 502863..503438 1 NC_014738.1 KEGG: sto:ST1370 signal recognition particle receptor protein; SPTR: Predicted protein; hypothetical protein 503438 10001201 Riean_0466 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045140.1 502863 D 693978 CDS YP_004045141.1 313205964 10001202 503653..506112 1 NC_014738.1 COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterPro IPR014021: IPR001650: IPR011545: IPR005259: IPR 014001; KEGG: fba:FIC_00799 helicase PriA essential for OriC/DnaA-independent DNA replication; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DNA replication factor Y; TIGRFAM: primosomal protein N'; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: primosomal protein N'; primosomal protein n' 506112 10001202 Riean_0467 Riemerella anatipestifer ATCC 11845 = DSM 15868 primosomal protein n' YP_004045141.1 503653 D 693978 CDS YP_004045142.1 313205965 10001203 506233..507654 1 NC_014738.1 COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: fba:FIC_00800 D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase; SPTR: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase 507654 10001203 Riean_0468 Riemerella anatipestifer ATCC 11845 = DSM 15868 D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase YP_004045142.1 506233 D 693978 CDS YP_004045143.1 313205966 10001204 507744..508937 1 NC_014738.1 COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839: IPR011282; KEGG: fba:FIC_00804 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; PRIAM: Glycine C-acetyltransferase; SPTR: Glycine C-acetyltransferase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase; 2-amino-3-ketobutyrate coenzyme a ligase 508937 10001204 Riean_0469 Riemerella anatipestifer ATCC 11845 = DSM 15868 2-amino-3-ketobutyrate coenzyme a ligase YP_004045143.1 507744 D 693978 CDS YP_004045144.1 313205967 10001205 509040..509963 1 NC_014738.1 COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: neu:NE2450 Mrr restriction system protein; PFAM: restriction endonuclease; SPTR: Putative Mrr restriction system protein; PFAM: Restriction endonuclease; restriction endonuclease 509963 10001205 Riean_0470 Riemerella anatipestifer ATCC 11845 = DSM 15868 restriction endonuclease YP_004045144.1 509040 D 693978 CDS YP_004045145.1 313205968 10001206 complement(510093..510785) 1 NC_014738.1 InterPro IPR003689; KEGG: fba:FIC_01639 hypothetical protein; PFAM: zinc/iron permease; SPTR: Putative uncharacterized protein; PFAM: ZIP Zinc transporter; zinc/iron permease 510785 10001206 Riean_0471 Riemerella anatipestifer ATCC 11845 = DSM 15868 zinc/iron permease YP_004045145.1 510093 R 693978 CDS YP_004045146.1 313205969 10001207 510976..512013 1 NC_014738.1 COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: fba:FIC_01300 cystathionine beta-synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase; pyridoxal-5'-phosphate-dependent protein subunit beta 512013 10001207 Riean_0472 Riemerella anatipestifer ATCC 11845 = DSM 15868 pyridoxal-5'-phosphate-dependent protein subunit beta YP_004045146.1 510976 D 693978 CDS YP_004045147.1 313205970 10001208 512109..512435 1 NC_014738.1 COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: fjo:Fjoh_3295 small multidrug resistance protein; PFAM: small multidrug resistance protein; SPTR: Small multidrug resistance protein; PFAM: Small Multidrug Resistance protein; small multidrug resistance protein 512435 10001208 Riean_0473 Riemerella anatipestifer ATCC 11845 = DSM 15868 small multidrug resistance protein YP_004045147.1 512109 D 693978 CDS YP_004045148.1 313205971 10001209 complement(512443..513972) 1 NC_014738.1 InterPro IPR008756; KEGG: fba:FIC_01266 conserved hypothetical protein, membrane; PFAM: peptidase M56 BlaR1; SPTR: Putative uncharacterized protein; PFAM: BlaR1 peptidase M56; peptidase m56 blar1 513972 10001209 Riean_0474 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m56 blar1 YP_004045148.1 512443 R 693978 CDS YP_004045149.1 313205972 10001210 complement(513979..514338) 1 NC_014738.1 COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fba:FIC_01267 transcriptional regulator; PFAM: Penicillinase repressor; SPTR: Probable antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; transcriptional repressor, copy family 514338 10001210 Riean_0475 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional repressor, copy family YP_004045149.1 513979 R 693978 CDS YP_004045150.1 313205973 10001211 complement(514485..515888) 1 NC_014738.1 COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR000815: IPR004099: IPR006258: IPR 012999; KEGG: fba:FIC_01592 dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 515888 10001211 Riean_0476 Riemerella anatipestifer ATCC 11845 = DSM 15868 dihydrolipoamide dehydrogenase YP_004045150.1 514485 R 693978 CDS YP_004045151.1 313205974 10001212 complement(516016..516822) 1 NC_014738.1 COGs: COG2326 conserved hypothetical protein; InterPro IPR016898: IPR005660; KEGG: nam:NAMH_0823 PvdS; PFAM: protein of unknown function DUF344; SPTR: Polyphosphate kinase 2; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family; hypothetical protein 516822 10001212 Riean_0477 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045151.1 516016 R 693978 CDS YP_004045152.1 313205975 10001213 complement(516841..517695) 1 NC_014738.1 COGs: COG2326 conserved hypothetical protein; InterPro IPR016898: IPR005660; KEGG: nde:NIDE3880 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate kinase 2, PA0141 family; hypothetical protein 517695 10001213 Riean_0478 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045152.1 516841 R 693978 CDS YP_004045153.1 313205976 10001216 complement(518162..518479) 1 NC_014738.1 COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR006662: IPR017936: IPR013766: IPR005746: IPR 017937; KEGG: fba:FIC_00764 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 518479 10001216 Riean_0479 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioredoxin YP_004045153.1 518162 R 693978 CDS YP_004045154.1 313205977 10001217 complement(518563..519708) 1 NC_014738.1 COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR016454: IPR000192: IPR020578; KEGG: fba:FIC_00763 cysteine desulfurase; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; PFAM: Aminotransferase class-V; cysteine desulfurase 519708 10001217 Riean_0480 Riemerella anatipestifer ATCC 11845 = DSM 15868 cysteine desulfurase YP_004045154.1 518563 R 693978 CDS YP_004045155.1 313205978 10001218 complement(519712..520221) 1 NC_014738.1 KEGG: ptm:GSPATT00026408001 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 520221 10001218 Riean_0481 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045155.1 519712 R 693978 CDS YP_004045156.1 313205979 10001219 complement(520242..520829) 1 NC_014738.1 COGs: COG0560 Phosphoserine phosphatase; InterPro IPR006383: IPR006385; KEGG: fba:FIC_00762 HAD-superfamily hydrolase subfamily IB, PSPase-like protein; SPTR: HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; haD-superfamily hydrolase, subfamily ib (pspase-like) 520829 10001219 Riean_0482 Riemerella anatipestifer ATCC 11845 = DSM 15868 haD-superfamily hydrolase, subfamily ib (pspase-like) YP_004045156.1 520242 R 693978 CDS YP_004045157.1 313205980 10001220 complement(520863..521588) 1 NC_014738.1 COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002347: IPR020904; KEGG: fba:FIC_00761 3-oxoacyl-[acyl-carrier protein] reductase paralog; SPTR: 3-oxoacyl-[acyl-carrier protein] reductase paralog; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 521588 10001220 Riean_0483 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-oxoacyl-ACP reductase YP_004045157.1 520863 R 693978 CDS YP_004045158.1 313205981 10001221 complement(521608..522579) 1 NC_014738.1 COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: fba:FIC_00736 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; SPTR: Possible geranyltranstransferase; PFAM: Polyprenyl synthetase; polyprenyl synthetase 522579 10001221 Riean_0484 Riemerella anatipestifer ATCC 11845 = DSM 15868 polyprenyl synthetase YP_004045158.1 521608 R 693978 CDS YP_004045159.1 313205982 10001222 complement(522702..522962) 1 NC_014738.1 InterPro IPR005651; KEGG: fpl:Ferp_0384 protein of unknown function DUF343; PFAM: protein of unknown function DUF343; SPTR: Putative uncharacterized protein; PFAM: Trm112p-like protein; hypothetical protein 522962 10001222 Riean_0485 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045159.1 522702 R 693978 CDS YP_004045160.1 313205983 10001223 complement(522965..523588) 1 NC_014738.1 COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733; KEGG: saf:SULAZ_0957 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; SPTR: Thiamin-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; thiamine monophosphate synthase 523588 10001223 Riean_0486 Riemerella anatipestifer ATCC 11845 = DSM 15868 thiamine monophosphate synthase YP_004045160.1 522965 R 693978 CDS YP_004045161.1 313205984 10001224 complement(523579..524622) 1 NC_014738.1 COGs: COG0309 Hydrogenase maturation factor; InterPro IPR000728: IPR010918; KEGG: sti:Sthe_2120 AIR synthase related protein domain protein; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; SPTR: Hydrogenase expression/formation factor related protein; PFAM: AIR synthase related protein, C-terminal domain; air synthase related protein domain-containing protein 524622 10001224 Riean_0487 Riemerella anatipestifer ATCC 11845 = DSM 15868 air synthase related protein domain-containing protein YP_004045161.1 523579 R 693978 CDS YP_004045162.1 313205985 10001225 complement(524635..525357) 1 NC_014738.1 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: rrs:RoseRS_4381 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain; type 11 methyltransferase 525357 10001225 Riean_0488 Riemerella anatipestifer ATCC 11845 = DSM 15868 type 11 methyltransferase YP_004045162.1 524635 R 693978 CDS YP_004045163.1 313205986 10001226 525625..526389 1 NC_014738.1 KEGG: fba:FIC_02177 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2807); hypothetical protein 526389 10001226 Riean_0489 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045163.1 525625 D 693978 CDS YP_004045164.1 313205987 10001227 complement(526473..527864) 1 NC_014738.1 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: fba:FIC_00958 N-acyl-L-amino acid amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: N-acyl-L-amino acid amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; peptidase m20 527864 10001227 Riean_0490 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m20 YP_004045164.1 526473 R 693978 CDS YP_004045165.1 313205988 10001228 complement(527965..528612) 1 NC_014738.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664: IPR006665; KEGG: fba:FIC_01635 OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: OmpA/MotB domain protein; PFAM: OmpA family; ompa/motb domain-containing protein 528612 10001228 Riean_0491 Riemerella anatipestifer ATCC 11845 = DSM 15868 ompa/motb domain-containing protein YP_004045165.1 527965 R 693978 CDS YP_004045166.1 313205989 10001229 complement(528679..529830) 1 NC_014738.1 InterPro IPR004398; KEGG: fba:FIC_00956 SAM-dependent methyltransferase; PFAM: Conserved hypothetical protein CHP00095; SPTR: Putative uncharacterized protein; PFAM: Conserved hypothetical protein 95; hypothetical protein 529830 10001229 Riean_0492 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045166.1 528679 R 693978 CDS YP_004045167.1 313205990 10001233 530376..530903 1 NC_014738.1 COGs: COG0703 Shikimate kinase; InterPro IPR000623; KEGG: fba:FIC_00480 shikimate kinase I; PFAM: shikimate kinase; PRIAM: Shikimate kinase; SPTR: Shikimate kinase; PFAM: Shikimate kinase; shikimate kinase 530903 10001233 Riean_0493 Riemerella anatipestifer ATCC 11845 = DSM 15868 shikimate kinase YP_004045167.1 530376 D 693978 CDS YP_004045168.1 313205991 10001234 complement(530875..531309) 1 NC_014738.1 COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: fba:FIC_00479 ribosome-associated heat shock protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Heat shock protein 15; PFAM: S4 domain; heat shock protein hsp15 531309 10001234 Riean_0494 Riemerella anatipestifer ATCC 11845 = DSM 15868 heat shock protein hsp15 YP_004045168.1 530875 R 693978 CDS YP_004045169.1 313205992 10001235 531390..532109 1 NC_014738.1 KEGG: fba:FIC_00478 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 532109 10001235 Riean_0495 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045169.1 531390 D 693978 CDS YP_004045170.1 313205993 10001236 complement(532147..534237) 1 NC_014738.1 COGs: COG1200 RecG-like helicase; InterPro IPR014021: IPR001650: IPR004365: IPR011545: IPR 004609: IPR014001; KEGG: fba:FIC_01455 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent DNA helicase; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase recg 534237 10001236 Riean_0496 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-dependent DNA helicase recg YP_004045170.1 532147 R 693978 CDS YP_004045171.1 313205994 10001237 534355..535296 1 NC_014738.1 COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: fba:FIC_01684 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter 535296 10001237 Riean_0497 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045171.1 534355 D 693978 CDS YP_004045172.1 313205995 10001238 complement(535338..535676) 1 NC_014738.1 COGs: COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; InterPro IPR013987: IPR013988: IPR004624; KEGG: fba:FIC_01683 alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; SPTR: Alkylphosphonate utilization operon protein PhnA; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA; alkylphosphonate utilization operon protein phna 535676 10001238 Riean_0498 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkylphosphonate utilization operon protein phna YP_004045172.1 535338 R 693978 CDS YP_004045173.1 313205996 10001239 complement(535804..537075) 1 NC_014738.1 COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839: IPR001917; KEGG: fba:FIC_01299 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: Possible glycine C-acetyltransferase; PFAM: Aminotransferase class I and II; 8-amino-7-oxononanoate synthase 537075 10001239 Riean_0499 Riemerella anatipestifer ATCC 11845 = DSM 15868 8-amino-7-oxononanoate synthase YP_004045173.1 535804 R 693978 CDS YP_004045174.1 313205997 10001240 complement(537217..538707) 1 NC_014738.1 COGs: COG3975 protease with the C-terminal PDZ domain; KEGG: rbi:RB2501_09220 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 538707 10001240 Riean_0500 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045174.1 537217 R 693978 CDS YP_004045175.1 313205998 10001241 complement(538775..539752) 1 NC_014738.1 COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: fba:FIC_01182 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; SPTR: Possible geranyltranstransferase; PFAM: Polyprenyl synthetase; polyprenyl synthetase 539752 10001241 Riean_0501 Riemerella anatipestifer ATCC 11845 = DSM 15868 polyprenyl synthetase YP_004045175.1 538775 R 693978 CDS YP_004045176.1 313205999 10001242 complement(539793..540674) 1 NC_014738.1 KEGG: fba:FIC_01181 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 540674 10001242 Riean_0502 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045176.1 539793 R 693978 CDS YP_004045177.1 313206000 10001243 540723..541136 1 NC_014738.1 InterPro IPR000086: IPR020084; KEGG: fba:FIC_01353 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain; nudix hydrolase 541136 10001243 Riean_0503 Riemerella anatipestifer ATCC 11845 = DSM 15868 nudix hydrolase YP_004045177.1 540723 D 693978 CDS YP_004045178.1 313206001 10001244 541210..541590 1 NC_014738.1 InterPro IPR005650; KEGG: fba:FIC_01404 antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: Putative antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; penicillinase repressor 541590 10001244 Riean_0504 Riemerella anatipestifer ATCC 11845 = DSM 15868 penicillinase repressor YP_004045178.1 541210 D 693978 CDS YP_004045179.1 313206002 10001245 541613..543874 1 NC_014738.1 COGs: COG1289 membrane protein; KEGG: fba:FIC_00566 hypothetical protein; SPTR: Protein of hypothetical function DUF893; PFAM: Fusaric acid resistance protein family; TIGRFAM: hypothetical membrane protein, TIGR01666; hypothetical protein 543874 10001245 Riean_0505 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045179.1 541613 D 693978 CDS YP_004045180.1 313206003 10001246 complement(543847..544458) 1 NC_014738.1 InterPro IPR008278; KEGG: fba:FIC_00565 siderophore (surfactin) biosynthesis regulatory protein; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Siderophore (Surfactin) biosynthesis regulatory protein; PFAM: 4'-phosphopantetheinyl transferase superfamily; 4'-phosphopantetheinyl transferase 544458 10001246 Riean_0506 Riemerella anatipestifer ATCC 11845 = DSM 15868 4'-phosphopantetheinyl transferase YP_004045180.1 543847 R 693978 CDS YP_004045181.1 313206004 10001247 complement(544475..545617) 1 NC_014738.1 COGs: COG0306 Phosphate/sulphate permease; InterPro IPR001204; KEGG: fba:FIC_00735 probable low-affinity inorganic phosphate transporter; PFAM: phosphate transporter; SPTR: Probable low-affinity inorganic phosphate transporter; PFAM: Phosphate transporter family; phosphate transporter 545617 10001247 Riean_0507 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphate transporter YP_004045181.1 544475 R 693978 CDS YP_004045182.1 313206005 10001248 complement(545650..546288) 1 NC_014738.1 COGs: COG1392 Phosphate transport regulator (distant homolog of PhoU); InterPro IPR018445; KEGG: fba:FIC_00734 possible phosphate transport regulator; PFAM: Putitive phosphate transport regulator; SPTR: Possible phosphate transport regulator; PFAM: Protein of unknown function DUF47; TIGRFAM: conserved hypothetical protein TIGR00153; phosphate transport regulator 546288 10001248 Riean_0508 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphate transport regulator YP_004045182.1 545650 R 693978 CDS YP_004045183.1 313206006 10001249 546570..547103 1 NC_014738.1 KEGG: str:Sterm_0792 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 547103 10001249 Riean_0509 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045183.1 546570 D 693978 CDS YP_004045184.1 313206007 10001250 complement(547205..549517) 1 NC_014738.1 COGs: COG0620 Methionine synthase II (cobalamin-independent); InterPro IPR006276: IPR013215: IPR002629; KEGG: coc:Coch_1731 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; SPTR:5-methyltetrahydropteroyltriglutamate--homocys teinemethyltransferase; TIGRFAM:5-methyltetrahydropteroyltriglutamate/homoc ysteineS-methyltransferase; PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; methionine synthase (b12-independent) 549517 10001250 Riean_0510 Riemerella anatipestifer ATCC 11845 = DSM 15868 methionine synthase (b12-independent) YP_004045184.1 547205 R 693978 CDS YP_004045185.1 313206008 10001251 complement(549835..550170) 1 NC_014738.1 KEGG: cts:Ctha_2339 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 550170 10001251 Riean_0511 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045185.1 549835 R 693978 CDS YP_004045186.1 313206009 10001252 complement(550305..551033) 1 NC_014738.1 COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fba:FIC_01280 RNA methyltransferase, TrmH family; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: tRNA/rRNA methyltransferase; manually curated; PFAM: SpoU rRNA Methylase family; tRNA/rRNA methyltransferase (spou) 551033 10001252 Riean_0512 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA/rRNA methyltransferase (spou) YP_004045186.1 550305 R 693978 CDS YP_004045187.1 313206010 10001253 551019..553598 1 NC_014738.1 COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184; KEGG: fba:FIC_01279 hypothetical protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Surface antigen variable number repeat; Surface antigen; surface antigen (d15) 553598 10001253 Riean_0513 Riemerella anatipestifer ATCC 11845 = DSM 15868 surface antigen (d15) YP_004045187.1 551019 D 693978 CDS YP_004045188.1 313206011 10001254 complement(553659..554741) 1 NC_014738.1 COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR002701: IPR006218: IPR020822; KEGG: fba:FIC_01361 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta; PFAM: DAHP synthetase I/KDSA; Chorismate mutase, type II; SPTR: 3-deoxy-7-phosphoheptulonate synthase; PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; dahp synthetase i/kdsa 554741 10001254 Riean_0514 Riemerella anatipestifer ATCC 11845 = DSM 15868 dahp synthetase i/kdsa YP_004045188.1 553659 R 693978 CDS YP_004045189.1 313206012 10001255 complement(554753..556432) 1 NC_014738.1 COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR001270: IPR003959: IPR012763: IPR003593; KEGG: fba:FIC_01363 DNA polymerase III; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: DNA polymerase III subunit gamma/tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; DNA polymerase III subunits gamma/tau 556432 10001255 Riean_0515 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA polymerase III subunits gamma/tau YP_004045189.1 554753 R 693978 CDS YP_004045190.1 313206013 10001256 complement(556568..557179) 1 NC_014738.1 COGs: COG0221 Inorganic pyrophosphatase; InterPro IPR008162; KEGG: fba:FIC_01394 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: Inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; inorganic diphosphatase 557179 10001256 Riean_0516 Riemerella anatipestifer ATCC 11845 = DSM 15868 inorganic diphosphatase YP_004045190.1 556568 R 693978 CDS YP_004045191.1 313206014 10001257 complement(557196..557702) 1 NC_014738.1 KEGG: fba:FIC_01395 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 557702 10001257 Riean_0517 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045191.1 557196 R 693978 CDS YP_004045192.1 313206015 10001258 complement(557761..558663) 1 NC_014738.1 KEGG: fba:FIC_01398 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 558663 10001258 Riean_0518 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045192.1 557761 R 693978 CDS YP_004045193.1 313206016 10001259 complement(558647..559324) 1 NC_014738.1 COGs: COG2003 DNA repair protein; InterPro IPR001405: IPR020891; KEGG: fba:FIC_01399 DNA repair protein RadC; PFAM: DNA repair protein RadC; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein radc 559324 10001259 Riean_0519 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA repair protein radc YP_004045193.1 558647 R 693978 CDS YP_004045194.1 313206017 10001260 complement(559349..560014) 1 NC_014738.1 COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR015854: IPR017871: IPR003593; KEGG: fba:FIC_01400 lipoprotein releasing system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter; ABC transporter 560014 10001260 Riean_0520 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045194.1 559349 R 693978 CDS YP_004045195.1 313206018 10001261 complement(560116..561831) 1 NC_014738.1 KEGG: cat:CA2559_06760 outer membrane protein; SPTR: Putative uncharacterized protein; hypothetical protein 561831 10001261 Riean_0521 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045195.1 560116 R 693978 CDS YP_004045196.1 313206019 10001262 561916..562284 1 NC_014738.1 COGs: COG1380 Putative effector of murein hydrolase LrgA; InterPro IPR005538; KEGG: bth:BT_3691 hypothetical protein; PFAM: LrgA family protein; SPTR: LrgA family protein; PFAM: LrgA family; lrga family protein 562284 10001262 Riean_0522 Riemerella anatipestifer ATCC 11845 = DSM 15868 lrga family protein YP_004045196.1 561916 D 693978 CDS YP_004045197.1 313206020 10001263 562287..562979 1 NC_014738.1 COGs: COG1346 Putative effector of murein hydrolase; InterPro IPR007300; KEGG: coc:Coch_0074 LrgB family protein; PFAM: LrgB family protein; SPTR: LrgB family protein; PFAM: LrgB-like family; TIGRFAM: conserved hypothetical protein TIGR00659; lrgb family protein 562979 10001263 Riean_0523 Riemerella anatipestifer ATCC 11845 = DSM 15868 lrgb family protein YP_004045197.1 562287 D 693978 CDS YP_004045198.1 313206021 10001264 562995..563819 1 NC_014738.1 COGs: COG0294 Dihydropteroate synthase; InterPro IPR000489: IPR006390; KEGG: fba:FIC_01458 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: Dihydropteroate synthase; SPTR: Dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; dihydropteroate synthase 563819 10001264 Riean_0524 Riemerella anatipestifer ATCC 11845 = DSM 15868 dihydropteroate synthase YP_004045198.1 562995 D 693978 CDS YP_004045199.1 313206022 10001265 complement(563849..564520) 1 NC_014738.1 COGs: COG0283 Cytidylate kinase; InterPro IPR011994: IPR003136; KEGG: fba:FIC_01284 cytidylate kinase; PFAM: cytidylate kinase region; SPTR: Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase 564520 10001265 Riean_0525 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytidylate kinase YP_004045199.1 563849 R 693978 CDS YP_004045200.1 313206023 10001266 complement(564542..565537) 1 NC_014738.1 KEGG: fba:FIC_01285 low affinity penicillin binding protein; SPTR: Low affinity penicillin binding protein; low affinity penicillin binding protein 565537 10001266 Riean_0526 Riemerella anatipestifer ATCC 11845 = DSM 15868 low affinity penicillin binding protein YP_004045200.1 564542 R 693978 CDS YP_004045201.1 313206024 10001267 complement(565550..566590) 1 NC_014738.1 InterPro IPR005242; KEGG: fba:FIC_00708 integral membrane protein; SPTR: Integral membrane protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; integral membrane protein 566590 10001267 Riean_0527 Riemerella anatipestifer ATCC 11845 = DSM 15868 integral membrane protein YP_004045201.1 565550 R 693978 CDS YP_004045202.1 313206025 10001268 complement(566591..566941) 1 NC_014738.1 COGs: COG0853 Aspartate 1-decarboxylase; InterPro IPR003190; KEGG: fba:FIC_00707 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; aspartate 1-decarboxylase 566941 10001268 Riean_0528 Riemerella anatipestifer ATCC 11845 = DSM 15868 aspartate 1-decarboxylase YP_004045202.1 566591 R 693978 CDS YP_004045203.1 313206026 10001269 567238..567528 1 NC_014738.1 COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119: IPR020816: IPR017441; KEGG: fba:FIC_00706 DNA-binding protein HU-beta; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: DNA-binding protein HU-beta; PFAM: Bacterial DNA-binding protein; nucleoid protein hbs 567528 10001269 Riean_0529 Riemerella anatipestifer ATCC 11845 = DSM 15868 nucleoid protein hbs YP_004045203.1 567238 D 693978 CDS YP_004045204.1 313206027 10001270 complement(567665..568741) 1 NC_014738.1 InterPro IPR019775; KEGG: pgn:PGN_0794 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2891); hypothetical protein 568741 10001270 Riean_0530 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045204.1 567665 R 693978 CDS YP_004045205.1 313206028 10001271 complement(568809..569453) 1 NC_014738.1 COGs: COG0259 Pyridoxamine-phosphate oxidase; InterPro IPR011576: IPR019576: IPR000659: IPR019740; KEGG: fba:FIC_00705 pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxine 5'-phosphate oxidase, dimerisation-like; pyridoxamine 5'-phosphate oxidase-related FMN-binding; PRIAM: Pyridoxal 5'-phosphate synthase; SPTR: Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; pyridoxamine 5'-phosphate oxidase 569453 10001271 Riean_0531 Riemerella anatipestifer ATCC 11845 = DSM 15868 pyridoxamine 5'-phosphate oxidase YP_004045205.1 568809 R 693978 CDS YP_004045206.1 313206029 10001272 569476..570024 1 NC_014738.1 COGs: COG1678 Putative transcriptional regulator protein; InterPro IPR003774; KEGG: fba:FIC_00704 transcriptional regulator; PFAM: protein of unknown function DUF179; SPTR: Transcriptional regulator; PFAM: Uncharacterized ACR, COG1678; hypothetical protein 570024 10001272 Riean_0532 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045206.1 569476 D 693978 CDS YP_004045207.1 313206030 10001273 570114..571556 1 NC_014738.1 COGs: COG2195 Di- and tripeptidase; InterPro IPR001160: IPR002933: IPR011650; KEGG: fba:FIC_01558 aminoacyl-histidine dipeptidase (peptidase D); PFAM: peptidase dimerisation domain protein; peptidase M20; PRIAM: Xaa-His dipeptidase; SPTR: Xaa-His dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: Peptidase family M20/M25/M40; TIGRFAM: aminoacyl-histidine dipeptidase; aminoacyl-histidine dipeptidase 571556 10001273 Riean_0533 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminoacyl-histidine dipeptidase YP_004045207.1 570114 D 693978 CDS YP_004045208.1 313206031 10001274 571638..572564 1 NC_014738.1 InterPro IPR005135: IPR003006; KEGG: fba:FIC_01839 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase family protein; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase 572564 10001274 Riean_0534 Riemerella anatipestifer ATCC 11845 = DSM 15868 endonuclease/exonuclease/phosphatase YP_004045208.1 571638 D 693978 CDS YP_004045209.1 313206032 10001275 572606..573670 1 NC_014738.1 COGs: COG0082 Chorismate synthase; InterPro IPR000453: IPR020541; KEGG: fba:FIC_00289 chorismate synthase; PFAM: chorismate synthase; PRIAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: chorismate synthase; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; chorismate synthase 573670 10001275 Riean_0535 Riemerella anatipestifer ATCC 11845 = DSM 15868 chorismate synthase YP_004045209.1 572606 D 693978 CDS YP_004045210.1 313206033 10001276 573673..574236 1 NC_014738.1 KEGG: fba:FIC_00290 thioredoxin; SPTR: Thioredoxin-like protein; thioredoxin 574236 10001276 Riean_0536 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioredoxin YP_004045210.1 573673 D 693978 CDS YP_004045211.1 313206034 10001277 574258..574815 1 NC_014738.1 InterPro IPR017936: IPR000866: IPR017937; KEGG: fba:FIC_00291 thiol:disulfide interchange protein TlpA; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Possible cytochrome C-type biogenesis protein; PFAM: Redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen 574815 10001277 Riean_0537 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen YP_004045211.1 574258 D 693978 CDS YP_004045212.1 313206035 10001278 574871..575197 1 NC_014738.1 InterPro IPR010652; KEGG: fba:FIC_00292 hypothetical protein; PFAM: protein of unknown function DUF1232; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1232); hypothetical protein 575197 10001278 Riean_0538 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045212.1 574871 D 693978 CDS YP_004045213.1 313206036 10001279 complement(575278..575580) 1 NC_014738.1 KEGG: yen:YE3319 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; SPTR: Phosphoenolpyruvate-protein phosphotransferase ptsP; hypothetical protein 575580 10001279 Riean_0539 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045213.1 575278 R 693978 CDS YP_004045214.1 313206037 10001280 complement(575617..576195) 1 NC_014738.1 KEGG: lil:LA_1813 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 576195 10001280 Riean_0540 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045214.1 575617 R 693978 CDS YP_004045215.1 313206038 10001281 complement(576173..577045) 1 NC_014738.1 COGs: COG0320 Lipoate synthase; InterPro IPR003698: IPR007197: IPR006638; KEGG: fba:FIC_01810 lipoyl synthase; PFAM: Radical SAM domain protein; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Lipoyl synthase; TIGRFAM: lipoic acid synthetase; PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; lipoic acid synthetase 577045 10001281 Riean_0541 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipoic acid synthetase YP_004045215.1 576173 R 693978 CDS YP_004045216.1 313206039 10001282 complement(577035..577592) 1 NC_014738.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fba:FIC_01811 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: ECF family DNA-directed RNA polymerase sigma subunit SigW; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma-24 subunit, ecf subfamily 577592 10001282 Riean_0542 Riemerella anatipestifer ATCC 11845 = DSM 15868 RNA polymerase, sigma-24 subunit, ecf subfamily YP_004045216.1 577035 R 693978 CDS YP_004045217.1 313206040 10001284 578088..578447 1 NC_014738.1 COGs: COG0858 Ribosome-binding factor A; InterPro IPR000238; KEGG: fba:FIC_01648 ribosome-binding factor A; PFAM: ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor a 578447 10001284 Riean_0543 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribosome-binding factor a YP_004045217.1 578088 D 693978 CDS YP_004045218.1 313206041 10001285 578460..579662 1 NC_014738.1 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fba:FIC_01649 lipoprotein releasing system transmembrane protein LolC; PFAM: protein of unknown function DUF214; SPTR: Lipoprotein releasing system transmembrane protein; PFAM: Predicted permease; hypothetical protein 579662 10001285 Riean_0544 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045218.1 578460 D 693978 CDS YP_004045219.1 313206042 10001286 579704..580753 1 NC_014738.1 COGs: COG2356 Endonuclease I; InterPro IPR007346; KEGG: fba:FIC_01650 endonuclease I; PFAM: Endonuclease I; SPTR: Deoxyribonuclease I; PFAM: Endonuclease I; endonuclease i 580753 10001286 Riean_0545 Riemerella anatipestifer ATCC 11845 = DSM 15868 endonuclease i YP_004045219.1 579704 D 693978 CDS YP_004045220.1 313206043 10001287 complement(581171..582583) 1 NC_014738.1 COGs: COG1785 Alkaline phosphatase; InterPro IPR001952; KEGG: coc:Coch_0399 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; SPTR: Alkaline phosphatase; PFAM: Alkaline phosphatase; alkaline phosphatase 582583 10001287 Riean_0546 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkaline phosphatase YP_004045220.1 581171 R 693978 CDS YP_004045221.1 313206044 10001288 582724..583992 1 NC_014738.1 COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135: IPR001453: IPR008136; KEGG: fba:FIC_01801 competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; SPTR: Competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; competence/damage-inducible protein cina 583992 10001288 Riean_0547 Riemerella anatipestifer ATCC 11845 = DSM 15868 competence/damage-inducible protein cina YP_004045221.1 582724 D 693978 CDS YP_004045222.1 313206045 10001289 584088..586160 1 NC_014738.1 COGs: COG3590 metalloendopeptidase; InterPro IPR018497: IPR008753; KEGG: fba:FIC_00438 metallopeptidase; PFAM: peptidase M13; Peptidase M13, neprilysin-like; PRIAM: Endothelin-converting enzyme 1; SPTR: Metallopeptidase; PFAM: Peptidase family M13; endothelin-converting enzyme 1 586160 10001289 Riean_0548 Riemerella anatipestifer ATCC 11845 = DSM 15868 endothelin-converting enzyme 1 YP_004045222.1 584088 D 693978 CDS YP_004045223.1 313206046 10001290 586259..586978 1 NC_014738.1 COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462: IPR019825; KEGG: fba:FIC_00694 CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 586978 10001290 Riean_0549 Riemerella anatipestifer ATCC 11845 = DSM 15868 CDP-alcohol phosphatidyltransferase YP_004045223.1 586259 D 693978 CDS YP_004045224.1 313206047 10001291 586988..587752 1 NC_014738.1 COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR013520: IPR006055; KEGG: fba:FIC_00693 DNA Pol III epsilon chain; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: DNA Pol III Epsilon Chain; PFAM: Exonuclease; exonuclease rnase t and DNA polymerase iii 587752 10001291 Riean_0550 Riemerella anatipestifer ATCC 11845 = DSM 15868 exonuclease rnase t and DNA polymerase iii YP_004045224.1 586988 D 693978 CDS YP_004045225.1 313206048 10001292 587778..588383 1 NC_014738.1 COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: fba:FIC_00692 fumarylacetoacetate hydrolase family protein; PFAM: fumarylacetoacetate (FAA) hydrolase; SPTR: Fumarylacetoacetate hydrolase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; fumarylacetoacetate (faa) hydrolase 588383 10001292 Riean_0551 Riemerella anatipestifer ATCC 11845 = DSM 15868 fumarylacetoacetate (faa) hydrolase YP_004045225.1 587778 D 693978 CDS YP_004045226.1 313206049 10001293 588446..588889 1 NC_014738.1 COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006015: IPR006016; KEGG: fba:FIC_00691 universal stress protein family; PFAM: UspA domain-containing protein; SPTR: Universal stress protein UspA; PFAM: Universal stress protein family; uspa domain-containing protein 588889 10001293 Riean_0552 Riemerella anatipestifer ATCC 11845 = DSM 15868 uspa domain-containing protein YP_004045226.1 588446 D 693978 CDS YP_004045227.1 313206050 10001294 589496..590824 1 NC_014738.1 COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500: IPR017598; KEGG: fba:FIC_01226 hypothetical protein; PFAM: phosphoadenosine phosphosulfate reductase; SPTR: Putative sulfurtransferase DndC; TIGRFAM: sulfurtransferase DndC; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfurtransferase DndC; sulfurtransferase dndc 590824 10001294 Riean_0553 Riemerella anatipestifer ATCC 11845 = DSM 15868 sulfurtransferase dndc YP_004045227.1 589496 D 693978 CDS YP_004045228.1 313206051 10001295 590826..592943 1 NC_014738.1 InterPro IPR017599; KEGG: fba:FIC_01227 DNA repair ATPase; SPTR: DNA sulfur modification protein DndD; TIGRFAM: DNA sulfur modification protein DndD; TIGRFAM: DNA sulfur modification protein DndD; DNA sulfur modification protein dndd 592943 10001295 Riean_0554 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA sulfur modification protein dndd YP_004045228.1 590826 D 693978 CDS YP_004045229.1 313206052 10001296 592933..594513 1 NC_014738.1 InterPro IPR014969: IPR003593; KEGG: bfr:BF1153 hypothetical protein; PFAM: Domain of unknown function DUF1832; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: FtsK/SpoIIIE family; Bacterial protein of unknown function (DUF853); Domain of unknown function (DUF1832); TIGRFAM: DNA sulfur modification protein DndE; hypothetical protein 594513 10001296 Riean_0555 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045229.1 592933 D 693978 CDS YP_004045230.1 313206053 10001297 complement(594703..595335) 1 NC_014738.1 KEGG: dfe:Dfer_4646 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 595335 10001297 Riean_0556 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045230.1 594703 R 693978 CDS YP_004045231.1 313206054 10001298 complement(595373..597430) 1 NC_014738.1 COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: sli:Slin_6535 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; tonb-dependent receptor 597430 10001298 Riean_0557 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004045231.1 595373 R 693978 CDS YP_004045232.1 313206055 10001299 597553..598449 1 NC_014738.1 KEGG: fps:FP1496 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 598449 10001299 Riean_0558 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045232.1 597553 D 693978 CDS YP_004045233.1 313206056 10001300 complement(598579..599466) 1 NC_014738.1 COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: fba:FIC_02078 exopolyphosphatase; PFAM: Ppx/GppA phosphatase; SPTR: Exopolyphosphatase; PFAM: Ppx/GppA phosphatase family; ppx/gppa phosphatase 599466 10001300 Riean_0559 Riemerella anatipestifer ATCC 11845 = DSM 15868 ppx/gppa phosphatase YP_004045233.1 598579 R 693978 CDS YP_004045234.1 313206057 10001301 complement(599473..601539) 1 NC_014738.1 COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: fba:FIC_02116 polyphosphate kinase; PFAM: Polyphosphate kinase; PRIAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; polyphosphate kinase 601539 10001301 Riean_0560 Riemerella anatipestifer ATCC 11845 = DSM 15868 polyphosphate kinase YP_004045234.1 599473 R 693978 CDS YP_004045235.1 313206058 10001302 complement(601641..601973) 1 NC_014738.1 KEGG: gfo:GFO_1885 membrane protein; SPTR: Membrane protein; membrane protein 601973 10001302 Riean_0561 Riemerella anatipestifer ATCC 11845 = DSM 15868 membrane protein YP_004045235.1 601641 R 693978 CDS YP_004045236.1 313206059 10001303 complement(601993..602271) 1 NC_014738.1 KEGG: fps:FP0741 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2752); hypothetical protein 602271 10001303 Riean_0562 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045236.1 601993 R 693978 CDS YP_004045237.1 313206060 10001307 602817..603827 1 NC_014738.1 COGs: COG3023 Negative regulator of beta-lactamase expression; InterPro IPR002502: IPR002477; KEGG: fba:FIC_00579 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2; SPTR: Possible N-acetylmuramoyl-L-alanine amidase; PFAM: Putative peptidoglycan binding domain; N-acetylmuramoyl-L-alanine amidase; n-acetylmuramyl-l-alanine amidase, negative regulator of ampc, ampd 603827 10001307 Riean_0563 Riemerella anatipestifer ATCC 11845 = DSM 15868 n-acetylmuramyl-l-alanine amidase, negative regulator of ampc, ampd YP_004045237.1 602817 D 693978 CDS YP_004045238.1 313206061 10001308 complement(603853..604668) 1 NC_014738.1 KEGG: fba:FIC_00703 aminodeoxychorismate lyase; SPTR: BrancheD-chain-amino-acid transaminase; PFAM: Aminotransferase class IV; aminodeoxychorismate lyase 604668 10001308 Riean_0564 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminodeoxychorismate lyase YP_004045238.1 603853 R 693978 CDS YP_004045239.1 313206062 10001309 complement(604739..605155) 1 NC_014738.1 KEGG: fba:FIC_00702 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Activator of Hsp90 ATPase homolog 1-like protein; hypothetical protein 605155 10001309 Riean_0565 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045239.1 604739 R 693978 CDS YP_004045240.1 313206063 10001310 605301..607232 1 NC_014738.1 COGs: COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily; InterPro IPR012160: IPR000917; KEGG: fba:FIC_00695 probable phosphoglycerol transferase; PFAM: sulfatase; SPTR: Probable sulfatase; PFAM: Sulfatase; sulfatase 607232 10001310 Riean_0566 Riemerella anatipestifer ATCC 11845 = DSM 15868 sulfatase YP_004045240.1 605301 D 693978 CDS YP_004045241.1 313206064 10001311 607353..607772 1 NC_014738.1 COGs: COG4731 conserved hypothetical protein; InterPro IPR019223; KEGG: fba:FIC_00696 hypothetical protein; PFAM: Protein of unknown function DUF2147; SPTR: Putative uncharacterized protein; manually curated; PFAM: Uncharacterized protein conserved in bacteria (DUF2147); hypothetical protein 607772 10001311 Riean_0567 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045241.1 607353 D 693978 CDS YP_004045242.1 313206065 10001312 complement(607845..608390) 1 NC_014738.1 KEGG: fba:FIC_00434 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 608390 10001312 Riean_0568 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045242.1 607845 R 693978 CDS YP_004045243.1 313206066 10001313 complement(608401..609411) 1 NC_014738.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fba:FIC_01861 3-beta hydroxysteroid dehydrogenase/isomerase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Dihydroflavonol 4-reductase family protein; PFAM: NAD dependent epimerase/dehydratase family; naD-dependent epimerase/dehydratase 609411 10001313 Riean_0569 Riemerella anatipestifer ATCC 11845 = DSM 15868 naD-dependent epimerase/dehydratase YP_004045243.1 608401 R 693978 CDS YP_004045244.1 313206067 10001314 complement(609423..610208) 1 NC_014738.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: fba:FIC_01862 alpha/beta superfamily hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta superfamily hydrolase; PFAM: alpha/beta hydrolase fold; alpha/beta fold family hydrolase 610208 10001314 Riean_0570 Riemerella anatipestifer ATCC 11845 = DSM 15868 alpha/beta fold family hydrolase YP_004045244.1 609423 R 693978 CDS YP_004045245.1 313206068 10001315 complement(610202..610921) 1 NC_014738.1 COGs: COG0854 Pyridoxal phosphate biosynthesis protein; InterPro IPR004569; KEGG: fba:FIC_01863 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; pyridoxine 5'-phosphate synthase 610921 10001315 Riean_0571 Riemerella anatipestifer ATCC 11845 = DSM 15868 pyridoxine 5'-phosphate synthase YP_004045245.1 610202 R 693978 CDS YP_004045246.1 313206069 10001316 complement(610947..612269) 1 NC_014738.1 COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: fba:FIC_01864 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel; mscs mechanosensitive ion channel 612269 10001316 Riean_0572 Riemerella anatipestifer ATCC 11845 = DSM 15868 mscs mechanosensitive ion channel YP_004045246.1 610947 R 693978 CDS YP_004045247.1 313206070 10001317 612283..612768 1 NC_014738.1 COGs: COG2839 conserved hypothetical protein; InterPro IPR007403; KEGG: fba:FIC_01865 hypothetical protein; PFAM: protein of unknown function DUF456; SPTR: Protein of hypothetical function DUF456; PFAM: Protein of unknown function (DUF456); hypothetical protein 612768 10001317 Riean_0573 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045247.1 612283 D 693978 CDS YP_004045248.1 313206071 10001318 complement(612849..614870) 1 NC_014738.1 COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567: IPR002160; KEGG: fba:FIC_00709 peptidyl-dipeptidase; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; PRIAM: Oligopeptidase A; SPTR: Peptidyl-dipeptidase Dcp1; PFAM: Peptidase family M3; oligopeptidase a 614870 10001318 Riean_0574 Riemerella anatipestifer ATCC 11845 = DSM 15868 oligopeptidase a YP_004045248.1 612849 R 693978 CDS YP_004045249.1 313206072 10001319 complement(614970..616391) 1 NC_014738.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664: IPR006665; KEGG: fba:FIC_02166 thrombospondin type 3 repeat:OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: Thrombospondin type 3 repeat:OmpA/MotB; PFAM: OmpA family; ompa/motb domain-containing protein 616391 10001319 Riean_0575 Riemerella anatipestifer ATCC 11845 = DSM 15868 ompa/motb domain-containing protein YP_004045249.1 614970 R 693978 CDS YP_004045250.1 313206073 10001320 complement(616409..617830) 1 NC_014738.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664: IPR006665: IPR006690; KEGG: fba:FIC_02166 thrombospondin type 3 repeat:OmpA/MotB; PFAM: OmpA/MotB domain protein; SPTR: Thrombospondin type 3 repeat:OmpA/MotB; PFAM: OmpA family; ompa/motb domain-containing protein 617830 10001320 Riean_0576 Riemerella anatipestifer ATCC 11845 = DSM 15868 ompa/motb domain-containing protein YP_004045250.1 616409 R 693978 CDS YP_004045251.1 313206074 10001321 complement(617827..618276) 1 NC_014738.1 COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: aps:CFPG_427 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; SPTR: Possible 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 618276 10001321 Riean_0577 Riemerella anatipestifer ATCC 11845 = DSM 15868 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_004045251.1 617827 R 693978 CDS YP_004045252.1 313206075 10001322 618298..620052 1 NC_014738.1 COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004634: IPR002142: IPR004635; KEGG: fba:FIC_02168 protease IV; PFAM: peptidase S49; SPTR: Signal peptide peptidase SppA; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type; signal peptide peptidase sppa, 67k type 620052 10001322 Riean_0578 Riemerella anatipestifer ATCC 11845 = DSM 15868 signal peptide peptidase sppa, 67k type YP_004045252.1 618298 D 693978 CDS YP_004045253.1 313206076 10001323 complement(620137..620583) 1 NC_014738.1 COGs: COG1490 D-Tyr-tRNAtyr deacylase; InterPro IPR003732; KEGG: fba:FIC_02133 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(tyr) deacylase 620583 10001323 Riean_0579 Riemerella anatipestifer ATCC 11845 = DSM 15868 D-tyrosyl-tRNA(tyr) deacylase YP_004045253.1 620137 R 693978 CDS YP_004045254.1 313206077 10001324 complement(620589..621053) 1 NC_014738.1 KEGG: fba:FIC_02132 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 621053 10001324 Riean_0580 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045254.1 620589 R 693978 CDS YP_004045255.1 313206078 10001325 621156..621623 1 NC_014738.1 COGs: COG0782 Transcription elongation factor; InterPro IPR001437: IPR006359: IPR018151; KEGG: fba:FIC_02131 transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein; SPTR: Transcription elongation factor; TIGRFAM: transcription elongation factor GreA; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor grea 621623 10001325 Riean_0581 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcription elongation factor grea YP_004045255.1 621156 D 693978 CDS YP_004045256.1 313206079 10001326 621642..622028 1 NC_014738.1 COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: fba:FIC_02130 HIT family protein; PFAM: histidine triad (HIT) protein; SPTR: Histidine triad nucleotide-binding protein; PFAM: HIT domain; histidine triad (hit) protein 622028 10001326 Riean_0582 Riemerella anatipestifer ATCC 11845 = DSM 15868 histidine triad (hit) protein YP_004045256.1 621642 D 693978 CDS YP_004045257.1 313206080 10001327 622066..623238 1 NC_014738.1 COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterPro IPR010603: IPR013093: IPR019489: IPR004487: IPR 002078: IPR003593; KEGG: fba:FIC_02129 ATP-dependent Clp protease ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATP-dependent Clp protease ATP-binding subunit clpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); sigma 54 interacting domain-containing protein 623238 10001327 Riean_0583 Riemerella anatipestifer ATCC 11845 = DSM 15868 sigma 54 interacting domain-containing protein YP_004045257.1 622066 D 693978 CDS YP_004045258.1 313206081 10001329 625288..625539 1 NC_014738.1 KEGG: fba:FIC_02127 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 625539 10001329 Riean_0585 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045258.1 625288 D 693978 CDS YP_004045259.1 313206082 10001330 625577..626872 1 NC_014738.1 InterPro IPR017936: IPR013740; KEGG: fba:FIC_02126 lipoprotein/thioderoxin; PFAM: Redoxin domain protein; SPTR: Possible thiol:disulfide interchange protein; manually curated; PFAM: Redoxin; redoxin domain-containing protein 626872 10001330 Riean_0586 Riemerella anatipestifer ATCC 11845 = DSM 15868 redoxin domain-containing protein YP_004045259.1 625577 D 693978 CDS YP_004045260.1 313206083 10001332 627082..629229 1 NC_014738.1 COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR005747: IPR000432: IPR007696; KEGG: fba:FIC_01868 recombination inhibitory protein MutS2; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: DNA mismatch repair protein MutS domain protein; PFAM: MutS domain V; DNA mismatch repair protein MutS domain-containing protein 629229 10001332 Riean_0587 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA mismatch repair protein MutS domain-containing protein YP_004045260.1 627082 D 693978 CDS YP_004045261.1 313206084 10001333 629297..631423 1 NC_014738.1 COGs: COG2183 Transcriptional accessory protein; InterPro IPR003029: IPR018974: IPR006641: IPR003583; KEGG: fba:FIC_00898 RNA binding protein with S1 RNA-binding domain; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Helix-hairpin-helix DNA-binding class 1; SPTR: Transcription accessory protein; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; tex-like protein 631423 10001333 Riean_0588 Riemerella anatipestifer ATCC 11845 = DSM 15868 tex-like protein YP_004045261.1 629297 D 693978 CDS YP_004045262.1 313206085 10001334 631491..632474 1 NC_014738.1 COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475: IPR005476; KEGG: fba:FIC_00697 pyruvate dehydrogenase E1 component beta subunit; PFAM: Transketolase central region; Transketolase domain-containing protein; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: Pyruvate dehydrogenase (Lipoamide) E1 component, beta subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; pyruvate dehydrogenase (acetyl-transferring) 632474 10001334 Riean_0589 Riemerella anatipestifer ATCC 11845 = DSM 15868 pyruvate dehydrogenase (acetyl-transferring) YP_004045262.1 631491 D 693978 CDS YP_004045263.1 313206086 10001336 complement(632980..635772) 1 NC_014738.1 InterPro IPR004843; KEGG: hch:HCH_06682 phosphohydrolase; PFAM: metallophosphoesterase; SPTR: Ser/Thr protein phosphatase family protein; metallophosphoesterase 635772 10001336 Riean_0591 Riemerella anatipestifer ATCC 11845 = DSM 15868 metallophosphoesterase YP_004045263.1 632980 R 693978 CDS YP_004045264.1 313206087 10001337 complement(635985..636419) 1 NC_014738.1 KEGG: bvu:BVU_3258 alpha-glycosidase; SPTR: Glycoside hydrolase family 15, candidate alpha-glycosidase; hypothetical protein 636419 10001337 Riean_0592 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045264.1 635985 R 693978 CDS YP_004045265.1 313206088 10001339 complement(637766..638770) 1 NC_014738.1 COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020832: IPR020831: IPR020828: IPR020829: IPR 006424: IPR020830; KEGG: fba:FIC_00681 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase, type i 638770 10001339 Riean_0594 Riemerella anatipestifer ATCC 11845 = DSM 15868 glyceraldehyde-3-phosphate dehydrogenase, type i YP_004045265.1 637766 R 693978 CDS YP_004045266.1 313206089 10001340 complement(638862..639848) 1 NC_014738.1 COGs: COG0205 6-phosphofructokinase; InterPro IPR000023: IPR012003: IPR012828: IPR015912; KEGG: fba:FIC_00682 6-phosphofructokinase; PFAM: phosphofructokinase; SPTR: 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; 6-phosphofructokinase 639848 10001340 Riean_0595 Riemerella anatipestifer ATCC 11845 = DSM 15868 6-phosphofructokinase YP_004045266.1 638862 R 693978 CDS YP_004045267.1 313206090 10001341 639990..640331 1 NC_014738.1 KEGG: fba:FIC_00683 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 640331 10001341 Riean_0596 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045267.1 639990 D 693978 CDS YP_004045268.1 313206091 10001342 640415..642766 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fba:FIC_00684 outer membrane hemin receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane hemin receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; tonb-dependent receptor plug 642766 10001342 Riean_0597 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004045268.1 640415 D 693978 CDS YP_004045269.1 313206092 10001343 642804..643370 1 NC_014738.1 KEGG: fba:FIC_00685 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 643370 10001343 Riean_0598 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045269.1 642804 D 693978 CDS YP_004045270.1 313206093 10001344 643440..644090 1 NC_014738.1 InterPro IPR000758; KEGG: coc:Coch_0675 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 644090 10001344 Riean_0599 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045270.1 643440 D 693978 CDS YP_004045271.1 313206094 10001345 644264..645598 1 NC_014738.1 COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR008881: IPR005215; KEGG: fba:FIC_00686 cell division trigger factor; PFAM: trigger factor domain-containing protein; SPTR: Cell division trigger factor; TIGRFAM: trigger factor; PFAM: Bacterial trigger factor protein (TF); TIGRFAM: trigger factor; trigger factor 645598 10001345 Riean_0600 Riemerella anatipestifer ATCC 11845 = DSM 15868 trigger factor YP_004045271.1 644264 D 693978 CDS YP_004045272.1 313206095 10001346 645904..646284 1 NC_014738.1 COGs: COG0797 Lipoprotein; InterPro IPR005132: IPR012997; KEGG: fba:FIC_01926 rare lipoprotein A; PFAM: Rare lipoprotein A; SPTR: Possible lipoprotein; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A; rare lipoprotein a 646284 10001346 Riean_0601 Riemerella anatipestifer ATCC 11845 = DSM 15868 rare lipoprotein a YP_004045272.1 645904 D 693978 CDS YP_004045273.1 313206096 10001347 complement(646350..647111) 1 NC_014738.1 COGs: COG0708 Exonuclease III; InterPro IPR004808: IPR005135: IPR000097; KEGG: fba:FIC_01919 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: Exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); exodeoxyribonuclease iii xth 647111 10001347 Riean_0602 Riemerella anatipestifer ATCC 11845 = DSM 15868 exodeoxyribonuclease iii xth YP_004045273.1 646350 R 693978 CDS YP_004045274.1 313206097 10001348 complement(647127..648104) 1 NC_014738.1 COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269: IPR004652: IPR018517; KEGG: fba:FIC_01903 tRNA dihydrouridine synthase B; PFAM: dihydrouridine synthase DuS; SPTR: tRNA-dihydrouridine synthase; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, nifR3 family; tRNA-u20-dihydrouridine synthase 648104 10001348 Riean_0603 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA-u20-dihydrouridine synthase YP_004045274.1 647127 R 693978 CDS YP_004045275.1 313206098 10001349 complement(648154..651432) 1 NC_014738.1 KEGG: fba:FIC_00720 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 651432 10001349 Riean_0604 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045275.1 648154 R 693978 CDS YP_004045276.1 313206099 10001350 651523..652296 1 NC_014738.1 KEGG: fba:FIC_00723 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 652296 10001350 Riean_0605 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045276.1 651523 D 693978 CDS YP_004045277.1 313206100 10001351 652311..653039 1 NC_014738.1 KEGG: fba:FIC_00722 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 653039 10001351 Riean_0606 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045277.1 652311 D 693978 CDS YP_004045278.1 313206101 10001352 653151..653945 1 NC_014738.1 COGs: COG0207 Thymidylate synthase; InterPro IPR000398: IPR020940; KEGG: fba:FIC_01771 thymidylate synthase; PFAM: thymidylate synthase; PRIAM: Thymidylate synthase; SPTR: Thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; thymidylate synthase 653945 10001352 Riean_0607 Riemerella anatipestifer ATCC 11845 = DSM 15868 thymidylate synthase YP_004045278.1 653151 D 693978 CDS YP_004045279.1 313206102 10001353 653991..656501 1 NC_014738.1 COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fba:FIC_01769 aminopeptidase; PFAM: Peptidase M1 membrane alanine aminopeptidase; SPTR: Membrane alanine aminopeptidase; PFAM: Peptidase family M1; peptidase m1 membrane alanine aminopeptidase 656501 10001353 Riean_0608 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m1 membrane alanine aminopeptidase YP_004045279.1 653991 D 693978 CDS YP_004045280.1 313206103 10001355 complement(657331..658203) 1 NC_014738.1 COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR005810: IPR003781: IPR005811: IPR017440; KEGG: fba:FIC_01908 succinyl-CoA ligase [ADP-forming] alpha chain; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 658203 10001355 Riean_0610 Riemerella anatipestifer ATCC 11845 = DSM 15868 succinyl-CoA synthetase subunit alpha YP_004045280.1 657331 R 693978 CDS YP_004045281.1 313206104 10001356 complement(658308..659210) 1 NC_014738.1 COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR020573: IPR001451; KEGG: fba:FIC_01910 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase, non-repeat region 659210 10001356 Riean_0611 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase, non-repeat region YP_004045281.1 658308 R 693978 CDS YP_004045282.1 313206105 10001357 complement(659274..659837) 1 NC_014738.1 COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterPro IPR020599: IPR013185: IPR001059: IPR015365: IPR 011768: IPR013852; KEGG: fba:FIC_01911 elongation factor P; PFAM: Elongation factor P; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein; SPTR: Elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor p (ef-p) 659837 10001357 Riean_0612 Riemerella anatipestifer ATCC 11845 = DSM 15868 translation elongation factor p (ef-p) YP_004045282.1 659274 R 693978 CDS YP_004045283.1 313206106 10001358 complement(659864..660652) 1 NC_014738.1 COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137: IPR001451; KEGG: fba:FIC_01912 UDP-N-acetylglucosamine acyltransferase; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluco samineO-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--udp-n- acetylglucosamine o-acyltransferase 660652 10001358 Riean_0613 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyl-(acyl-carrier-protein)--udp-n- acetylglucosamine o-acyltransferase YP_004045283.1 659864 R 693978 CDS YP_004045284.1 313206107 10001359 complement(660662..662056) 1 NC_014738.1 COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; InterPro IPR004463: IPR013114: IPR010084; KEGG: fba:FIC_01913 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: N-acetylglucosamine deacetylase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: FabA-like domain; UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; 3-hydroxyacyl-(acyl-carrier-protein) dehydratase 662056 10001359 Riean_0614 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-hydroxyacyl-(acyl-carrier-protein) dehydratase YP_004045284.1 660662 R 693978 CDS YP_004045285.1 313206108 10001360 complement(662049..663083) 1 NC_014738.1 COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR020573: IPR001451: IPR007691; KEGG: fba:FIC_01914 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase 663083 10001360 Riean_0615 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase YP_004045285.1 662049 R 693978 CDS YP_004045286.1 313206109 10001361 complement(663167..664378) 1 NC_014738.1 COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR006674: IPR003607; KEGG: fba:FIC_01915 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; metal dependent phosphohydrolase 664378 10001361 Riean_0616 Riemerella anatipestifer ATCC 11845 = DSM 15868 metal dependent phosphohydrolase YP_004045286.1 663167 R 693978 CDS YP_004045287.1 313206110 10001362 complement(664432..665439) 1 NC_014738.1 COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342: IPR018110; KEGG: fba:FIC_01897 chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: Chloromuconate cycloisomerase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; mandelate racemase/muconate lactonizing protein 665439 10001362 Riean_0617 Riemerella anatipestifer ATCC 11845 = DSM 15868 mandelate racemase/muconate lactonizing protein YP_004045287.1 664432 R 693978 CDS YP_004045288.1 313206111 10001363 complement(665439..666455) 1 NC_014738.1 COGs: COG0158 Fructose-1 6-bisphosphatase; InterPro IPR000146: IPR020548; KEGG: fba:FIC_01896 fructose-1,6-bisphosphatase; PFAM: Inositol phosphatase/fructose-16-bisphosphatase; SPTR: Fructose-bisphosphatase; PFAM: Fructose-1-6-bisphosphatase; D-fructose 1,6-bisphosphatase 666455 10001363 Riean_0618 Riemerella anatipestifer ATCC 11845 = DSM 15868 D-fructose 1,6-bisphosphatase YP_004045288.1 665439 R 693978 CDS YP_004045289.1 313206112 10001364 666645..667883 1 NC_014738.1 COGs: COG0527 Aspartokinase; InterPro IPR001341: IPR001048; KEGG: fba:FIC_01895 aspartokinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: Aspartate kinase; SPTR: Aspartokinase; TIGRFAM: aspartate kinase; PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; aspartate kinase 667883 10001364 Riean_0619 Riemerella anatipestifer ATCC 11845 = DSM 15868 aspartate kinase YP_004045289.1 666645 D 693978 CDS YP_004045290.1 313206113 10001365 667909..669738 1 NC_014738.1 COGs: COG3176 Putative hemolysin; InterPro IPR002123; KEGG: fba:FIC_01894 hemolysin; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Putative hemolysin; PFAM: Acyltransferase; phospholipid/glycerol acyltransferase 669738 10001365 Riean_0620 Riemerella anatipestifer ATCC 11845 = DSM 15868 phospholipid/glycerol acyltransferase YP_004045290.1 667909 D 693978 CDS YP_004045291.1 313206114 10001367 669980..670588 1 NC_014738.1 KEGG: fba:FIC_01901 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3575); hypothetical protein 670588 10001367 Riean_0621 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045291.1 669980 D 693978 CDS YP_004045292.1 313206115 10001368 670593..670799 1 NC_014738.1 KEGG: fba:FIC_01902 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 670799 10001368 Riean_0622 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045292.1 670593 D 693978 CDS YP_004045293.1 313206116 10001369 complement(670860..675512) 1 NC_014738.1 COGs: COG0587 DNA polymerase III alpha subunit; InterPro IPR006055: IPR003141: IPR004805: IPR013520: IPR 004013: IPR011708: IPR004365; KEGG: fba:FIC_01380 DNA polymerase III alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; Exonuclease RNase T and DNA polymerase III; nucleic acid binding OB-fold tRNA/helicase-type; SMART: Exonuclease; phosphoesterase PHP domain protein; SPTR: DNA-directed DNA polymerase; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; Exonuclease; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA polymerase III subunit alpha 675512 10001369 Riean_0623 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA polymerase III subunit alpha YP_004045293.1 670860 R 693978 CDS YP_004045294.1 313206117 10001370 675691..675960 1 NC_014738.1 COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR000589: IPR005290; KEGG: fba:FIC_00469 30S ribosomal protein S15; PFAM: ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 675960 10001370 Riean_0624 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S15 YP_004045294.1 675691 D 693978 CDS YP_004045295.1 313206118 10001371 676172..678307 1 NC_014738.1 COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); InterPro IPR004087: IPR012162: IPR001247: IPR015847: IPR 015848: IPR018111: IPR003029: IPR004088; KEGG: fba:FIC_00451 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: KH domain protein; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase 678307 10001371 Riean_0625 Riemerella anatipestifer ATCC 11845 = DSM 15868 polyribonucleotide nucleotidyltransferase YP_004045295.1 676172 D 693978 CDS YP_004045296.1 313206119 10001372 678441..679457 1 NC_014738.1 KEGG: fba:FIC_02100 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 679457 10001372 Riean_0626 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045296.1 678441 D 693978 CDS YP_004045297.1 313206120 10001373 679547..680473 1 NC_014738.1 COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR001557: IPR011275: IPR001236; KEGG: fba:FIC_02092 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: Malate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; malate dehydrogenase (nad) 680473 10001373 Riean_0627 Riemerella anatipestifer ATCC 11845 = DSM 15868 malate dehydrogenase (nad) YP_004045297.1 679547 D 693978 CDS YP_004045298.1 313206121 10001374 680589..682493 1 NC_014738.1 COGs: COG0514 Superfamily II DNA helicase; InterPro IPR014001: IPR001650: IPR018329: IPR011545: IPR 014021; KEGG: fba:FIC_02165 ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase, recq family 682493 10001374 Riean_0628 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-dependent DNA helicase, recq family YP_004045298.1 680589 D 693978 CDS YP_004045299.1 313206122 10001375 682490..683443 1 NC_014738.1 COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005794: IPR002376: IPR005793; KEGG: fba:FIC_02164 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 683443 10001375 Riean_0629 Riemerella anatipestifer ATCC 11845 = DSM 15868 methionyl-tRNA formyltransferase YP_004045299.1 682490 D 693978 CDS YP_004045300.1 313206123 10001376 683525..684340 1 NC_014738.1 COGs: COG0796 Glutamate racemase; InterPro IPR004391: IPR018187: IPR015942; KEGG: fba:FIC_00315 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: Glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; glutamate racemase 684340 10001376 Riean_0630 Riemerella anatipestifer ATCC 11845 = DSM 15868 glutamate racemase YP_004045300.1 683525 D 693978 CDS YP_004045301.1 313206124 10001377 complement(684380..685372) 1 NC_014738.1 COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: fba:FIC_01844 porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; PFAM: Delta-aminolevulinic acid dehydratase; porphobilinogen synthase 685372 10001377 Riean_0631 Riemerella anatipestifer ATCC 11845 = DSM 15868 porphobilinogen synthase YP_004045301.1 684380 R 693978 CDS YP_004045302.1 313206125 10001378 685480..685836 1 NC_014738.1 KEGG: fba:FIC_01843 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 685836 10001378 Riean_0632 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045302.1 685480 D 693978 CDS YP_004045303.1 313206126 10001379 685922..686455 1 NC_014738.1 COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: fba:FIC_01831 SSU ribosomal protein S16p; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein s16p 686455 10001379 Riean_0633 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein s16p YP_004045303.1 685922 D 693978 CDS YP_004045304.1 313206127 10001380 686473..686997 1 NC_014738.1 COGs: COG0806 RimM protein required for 16S rRNA processing; InterPro IPR011961: IPR007903; KEGG: fba:FIC_01830 16S rRNA processing protein RimM; PFAM: PRC-barrel domain protein; SPTR: Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; 16S rRNA processing protein rimm 686997 10001380 Riean_0634 Riemerella anatipestifer ATCC 11845 = DSM 15868 16S rRNA processing protein rimm YP_004045304.1 686473 D 693978 CDS YP_004045305.1 313206128 10001381 687146..687775 1 NC_014738.1 COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: fba:FIC_00125 queuosine biosynthesis QueE radical SAM; PFAM: Radical SAM domain protein; SPTR: Organic radical activating enzyme; PFAM: Radical SAM superfamily; radical SAM domain-containing protein 687775 10001381 Riean_0635 Riemerella anatipestifer ATCC 11845 = DSM 15868 radical SAM domain-containing protein YP_004045305.1 687146 D 693978 CDS YP_004045306.1 313206129 10001382 687783..689114 1 NC_014738.1 COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475: IPR003362; KEGG: fba:FIC_00124 glycosyltransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Glycosyltransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 689114 10001382 Riean_0636 Riemerella anatipestifer ATCC 11845 = DSM 15868 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_004045306.1 687783 D 693978 CDS YP_004045307.1 313206130 10001383 689153..689914 1 NC_014738.1 COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: fba:FIC_00123 ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: protein of unknown function DUF140; SPTR: ABC-type transport system involved in resistance to organic solvents, permease component; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein 689914 10001383 Riean_0637 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045307.1 689153 D 693978 CDS YP_004045308.1 313206131 10001384 689914..690690 1 NC_014738.1 COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003593: IPR017871: IPR003439; KEGG: fba:FIC_00122 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter 690690 10001384 Riean_0638 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045308.1 689914 D 693978 CDS YP_004045309.1 313206132 10001385 690705..691328 1 NC_014738.1 KEGG: fba:FIC_00121 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 691328 10001385 Riean_0639 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045309.1 690705 D 693978 CDS YP_004045310.1 313206133 10001386 complement(691364..691666) 1 NC_014738.1 KEGG: fba:FIC_00120 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 691666 10001386 Riean_0640 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045310.1 691364 R 693978 CDS YP_004045311.1 313206134 10001387 complement(691721..692533) 1 NC_014738.1 COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: fba:FIC_00119 zn-dependent protease with chaperone function; PFAM: peptidase M48 Ste24p; SPTR: Zn-dependent protease with chaperone function; PFAM: Peptidase family M48; peptidase m48 ste24p 692533 10001387 Riean_0641 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m48 ste24p YP_004045311.1 691721 R 693978 CDS YP_004045312.1 313206135 10001388 692815..694572 1 NC_014738.1 COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR020845: IPR000873; KEGG: fba:FIC_01860 long-chain-fatty-aciD--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Long-chain-fatty-aciD--CoA ligase; PFAM: AMP-binding enzyme; amp-dependent synthetase and ligase 694572 10001388 Riean_0642 Riemerella anatipestifer ATCC 11845 = DSM 15868 amp-dependent synthetase and ligase YP_004045312.1 692815 D 693978 CDS YP_004045313.1 313206136 10001389 694608..695666 1 NC_014738.1 COGs: COG3407 Mevalonate pyrophosphate decarboxylase; InterPro IPR005935: IPR006204; KEGG: fba:FIC_01859 diphosphomevalonate decarboxylase; PFAM: GHMP kinase; SPTR: Mevalonate diphosphate decarboxylase; TIGRFAM: diphosphomevalonate decarboxylase; ghmp kinase 695666 10001389 Riean_0643 Riemerella anatipestifer ATCC 11845 = DSM 15868 ghmp kinase YP_004045313.1 694608 D 693978 CDS YP_004045314.1 313206137 10001390 695682..696059 1 NC_014738.1 InterPro IPR004360; KEGG: fjo:Fjoh_4919 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Lactoylglutathione lyase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase 696059 10001390 Riean_0644 Riemerella anatipestifer ATCC 11845 = DSM 15868 glyoxalase/bleomycin resistance protein/dioxygenase YP_004045314.1 695682 D 693978 CDS YP_004045315.1 313206138 10001391 696094..697203 1 NC_014738.1 COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterPro IPR005875: IPR003135: IPR011761; KEGG: fba:FIC_01755 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; 5-(carboxyamino)imidazole ribonucleotide synthase 697203 10001391 Riean_0645 Riemerella anatipestifer ATCC 11845 = DSM 15868 5-(carboxyamino)imidazole ribonucleotide synthase YP_004045315.1 696094 D 693978 CDS YP_004045316.1 313206139 10001392 697232..697732 1 NC_014738.1 COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: fba:FIC_01753 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; 5-(carboxyamino)imidazole ribonucleotide mutase 697732 10001392 Riean_0646 Riemerella anatipestifer ATCC 11845 = DSM 15868 5-(carboxyamino)imidazole ribonucleotide mutase YP_004045316.1 697232 D 693978 CDS YP_004045317.1 313206140 10001393 697770..698483 1 NC_014738.1 KEGG: ckr:CKR_2523 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 698483 10001393 Riean_0647 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045317.1 697770 D 693978 CDS YP_004045318.1 313206141 10001394 complement(698512..699153) 1 NC_014738.1 COGs: COG0400 esterase; InterPro IPR003140; KEGG: fba:FIC_01751 phospholipase/carboxylesterase family protein; PFAM: phospholipase/Carboxylesterase; SPTR: Phospholipase/carboxylesterase family protein; PFAM: Phospholipase/Carboxylesterase; phospholipase/carboxylesterase 699153 10001394 Riean_0648 Riemerella anatipestifer ATCC 11845 = DSM 15868 phospholipase/carboxylesterase YP_004045318.1 698512 R 693978 CDS YP_004045319.1 313206142 10001395 complement(699161..700453) 1 NC_014738.1 COGs: COG0162 Tyrosyl-tRNA synthetase; InterPro IPR002307: IPR002305: IPR002942; KEGG: fba:FIC_01749 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; PRIAM: Tyrosine--tRNA ligase; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 700453 10001395 Riean_0649 Riemerella anatipestifer ATCC 11845 = DSM 15868 tyrosyl-tRNA synthetase YP_004045319.1 699161 R 693978 CDS YP_004045320.1 313206143 10001396 700663..701274 1 NC_014738.1 KEGG: fps:FP0287 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 701274 10001396 Riean_0650 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045320.1 700663 D 693978 CDS YP_004045321.1 313206144 10001397 701277..701879 1 NC_014738.1 KEGG: fps:FP0287 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 701879 10001397 Riean_0651 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045321.1 701277 D 693978 CDS YP_004045322.1 313206145 10001398 701882..702490 1 NC_014738.1 KEGG: fps:FP0287 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 702490 10001398 Riean_0652 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045322.1 701882 D 693978 CDS YP_004045323.1 313206146 10001399 702535..703041 1 NC_014738.1 KEGG: fps:FP0287 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 703041 10001399 Riean_0653 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045323.1 702535 D 693978 CDS YP_004045324.1 313206147 10001400 703060..706221 1 NC_014738.1 KEGG: fps:FP0285 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 706221 10001400 Riean_0654 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045324.1 703060 D 693978 CDS YP_004045325.1 313206148 10001401 706311..707069 1 NC_014738.1 KEGG: fps:FP1876 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 707069 10001401 Riean_0655 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045325.1 706311 D 693978 CDS YP_004045326.1 313206149 10001402 707415..708107 1 NC_014738.1 COGs: COG2968 conserved hypothetical protein; InterPro IPR007497; KEGG: rbi:RB2501_03085 hypothetical protein; PFAM: protein of unknown function DUF541; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541); hypothetical protein 708107 10001402 Riean_0656 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045326.1 707415 D 693978 CDS YP_004045327.1 313206150 10001403 complement(708126..708605) 1 NC_014738.1 COGs: COG0328 Ribonuclease HI; InterPro IPR002156; KEGG: fba:FIC_02358 ribonuclease HI; PFAM: ribonuclease H; PRIAM: Ribonuclease H; SPTR: Ribonuclease H; PFAM: RNase H; ribonuclease h 708605 10001403 Riean_0657 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribonuclease h YP_004045327.1 708126 R 693978 CDS YP_004045328.1 313206151 10001404 complement(708606..710177) 1 NC_014738.1 COGs: COG0305 Replicative DNA helicase; InterPro IPR003593: IPR007692: IPR007693: IPR007694; KEGG: fba:FIC_02357 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; SPTR: Replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; primary replicative DNA helicase 710177 10001404 Riean_0658 Riemerella anatipestifer ATCC 11845 = DSM 15868 primary replicative DNA helicase YP_004045328.1 708606 R 693978 CDS YP_004045329.1 313206152 10001405 complement(710302..711114) 1 NC_014738.1 COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268: IPR011270: IPR000845; KEGG: coc:Coch_1936 inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; SPTR: Purine-nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase i, inosine and guanosine-specific 711114 10001405 Riean_0659 Riemerella anatipestifer ATCC 11845 = DSM 15868 purine nucleoside phosphorylase i, inosine and guanosine-specific YP_004045329.1 710302 R 693978 CDS YP_004045330.1 313206153 10001406 complement(711098..712123) 1 NC_014738.1 COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; InterPro IPR003758; KEGG: fba:FIC_02186 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; lipiD-a-disaccharide kinase 712123 10001406 Riean_0660 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipiD-a-disaccharide kinase YP_004045330.1 711098 R 693978 CDS YP_004045331.1 313206154 10001407 712321..713451 1 NC_014738.1 COGs: COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins; InterPro IPR005956: IPR004360; KEGG: phe:Phep_3281 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; PRIAM: 4-hydroxyphenylpyruvate dioxygenase; SPTR: 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 713451 10001407 Riean_0661 Riemerella anatipestifer ATCC 11845 = DSM 15868 4-hydroxyphenylpyruvate dioxygenase YP_004045331.1 712321 D 693978 CDS YP_004045332.1 313206155 10001408 713513..713983 1 NC_014738.1 KEGG: fba:FIC_00443 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 713983 10001408 Riean_0662 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045332.1 713513 D 693978 CDS YP_004045333.1 313206156 10001409 713987..715237 1 NC_014738.1 COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR005959: IPR015377: IPR002529; KEGG: fba:FIC_00442 fumarylacetoacetase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase; PRIAM: Fumarylacetoacetase; SPTR: Fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: Domain of unknown function (DUF1969); Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: fumarylacetoacetase; fumarylacetoacetase 715237 10001409 Riean_0663 Riemerella anatipestifer ATCC 11845 = DSM 15868 fumarylacetoacetase YP_004045333.1 713987 D 693978 CDS YP_004045334.1 313206157 10001410 complement(715298..715951) 1 NC_014738.1 InterPro IPR019619; KEGG: gfo:GFO_3452 hypothetical protein; PFAM: Protein of unknown function DUF2490; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2490); hypothetical protein 715951 10001410 Riean_0664 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045334.1 715298 R 693978 CDS YP_004045335.1 313206158 10001411 complement(716046..717431) 1 NC_014738.1 COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR000815: IPR012999: IPR006258: IPR 004099; KEGG: fba:FIC_01048 dihydrolipoamide dehydrogenase of brancheD-chain alpha-keto acid dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 717431 10001411 Riean_0665 Riemerella anatipestifer ATCC 11845 = DSM 15868 dihydrolipoamide dehydrogenase YP_004045335.1 716046 R 693978 CDS YP_004045336.1 313206159 10001412 complement(717589..718887) 1 NC_014738.1 COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: fba:FIC_01906 hypothetical protein; SPTR: ABC superfamily ATP binding cassette transporter, permease protein; hypothetical protein 718887 10001412 Riean_0666 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045336.1 717589 R 693978 CDS YP_004045337.1 313206160 10001413 complement(718894..719799) 1 NC_014738.1 COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003593: IPR017871: IPR003439; KEGG: fba:FIC_01905 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter 719799 10001413 Riean_0667 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045337.1 718894 R 693978 CDS YP_004045338.1 313206161 10001414 complement(719911..721026) 1 NC_014738.1 COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR003095: IPR001623: IPR012724: IPR018253: IPR 001305: IPR002939; KEGG: fba:FIC_01631 chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Chaperone CbpA; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ domain; DnaJ C terminal region; DnaJ central domain (4 repeats); TIGRFAM: chaperone protein DnaJ; chaperone protein dnaj 721026 10001414 Riean_0668 Riemerella anatipestifer ATCC 11845 = DSM 15868 chaperone protein dnaj YP_004045338.1 719911 R 693978 CDS YP_004045339.1 313206162 10001415 complement(721077..721628) 1 NC_014738.1 COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR000740; KEGG: fba:FIC_01632 heat shock protein GrpE; PFAM: GrpE protein; SPTR: Protein grpE; PFAM: GrpE; grpe protein 721628 10001415 Riean_0669 Riemerella anatipestifer ATCC 11845 = DSM 15868 grpe protein YP_004045339.1 721077 R 693978 CDS YP_004045340.1 313206163 10001416 complement(721715..723046) 1 NC_014738.1 COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: fba:FIC_01634 manganese transport protein MntH; PFAM: natural resistance-associated macrophage protein; SPTR: Manganese transport protein MntH; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters; mn2+/fe2+ transporter, nramp family 723046 10001416 Riean_0670 Riemerella anatipestifer ATCC 11845 = DSM 15868 mn2+/fe2+ transporter, nramp family YP_004045340.1 721715 R 693978 CDS YP_004045341.1 313206164 10001417 complement(723165..724604) 1 NC_014738.1 KEGG: fba:FIC_01638 hemin receptor; SPTR: Probable hemin receptor; hemin receptor 724604 10001417 Riean_0671 Riemerella anatipestifer ATCC 11845 = DSM 15868 hemin receptor YP_004045341.1 723165 R 693978 CDS YP_004045342.1 313206165 10001418 complement(724642..725685) 1 NC_014738.1 KEGG: fba:FIC_01637 Vitellogenin II precursor; SPTR: Glycine-rich protein; vitellogenin ii 725685 10001418 Riean_0672 Riemerella anatipestifer ATCC 11845 = DSM 15868 vitellogenin ii YP_004045342.1 724642 R 693978 CDS YP_004045343.1 313206166 10001419 725849..727324 1 NC_014738.1 COGs: COG0442 Prolyl-tRNA synthetase; InterPro IPR004499: IPR002314: IPR004154: IPR016061: IPR 006195; KEGG: fba:FIC_01636 prolyl-tRNA synthetase; PFAM: Prolyl-tRNA synthetase, class II-like; Anticodon-binding domain protein; tRNA synthetase class II (G H P and S); SPTR: Prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: Anticodon binding domain; Prolyl-tRNA synthetase, C-terminal; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family I; prolyl-tRNA synthetase 727324 10001419 Riean_0673 Riemerella anatipestifer ATCC 11845 = DSM 15868 prolyl-tRNA synthetase YP_004045343.1 725849 D 693978 CDS YP_004045344.1 313206167 10001420 727352..728545 1 NC_014738.1 InterPro IPR000074; KEGG: fba:FIC_01635 OmpA/MotB; PFAM: Apolipoprotein A1/A4/E; SPTR: OmpA/MotB domain protein; PFAM: Late embryogenesis abundant protein; apolipoprotein a1/a4/e 728545 10001420 Riean_0674 Riemerella anatipestifer ATCC 11845 = DSM 15868 apolipoprotein a1/a4/e YP_004045344.1 727352 D 693978 CDS YP_004045345.1 313206168 10001421 complement(728609..729259) 1 NC_014738.1 COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: fba:FIC_01357 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 729259 10001421 Riean_0675 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribulose-phosphate 3-epimerase YP_004045345.1 728609 R 693978 CDS YP_004045346.1 313206169 10001422 complement(729343..730209) 1 NC_014738.1 COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR000943: IPR014284: IPR009042: IPR007627: IPR 007624: IPR007630; KEGG: fba:FIC_01410 RNA polymerase sigma factor RpoD; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; SPTR: RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma 70 subunit, rpod subfamily 730209 10001422 Riean_0676 Riemerella anatipestifer ATCC 11845 = DSM 15868 RNA polymerase, sigma 70 subunit, rpod subfamily YP_004045346.1 729343 R 693978 CDS YP_004045347.1 313206170 10001423 complement(730311..730877) 1 NC_014738.1 COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: fba:FIC_01428 glutathione peroxidase; PFAM: glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: Glutathione peroxidase; PFAM: Glutathione peroxidase; peroxiredoxin 730877 10001423 Riean_0677 Riemerella anatipestifer ATCC 11845 = DSM 15868 peroxiredoxin YP_004045347.1 730311 R 693978 CDS YP_004045348.1 313206171 10001424 complement(730897..731565) 1 NC_014738.1 KEGG: fba:FIC_01429 hypothetical signal peptide-containing protein; SPTR: Hypothetical signal peptide-containing protein; hypothetical protein 731565 10001424 Riean_0678 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045348.1 730897 R 693978 CDS YP_004045349.1 313206172 10001425 complement(731583..732317) 1 NC_014738.1 COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR004528: IPR003329; KEGG: fba:FIC_01430 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 732317 10001425 Riean_0679 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_004045349.1 731583 R 693978 CDS YP_004045350.1 313206173 10001426 complement(732328..733131) 1 NC_014738.1 InterPro IPR013247; KEGG: cpi:Cpin_3584 hypothetical protein; PFAM: SH3 type 3 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial SH3 domain; sh3 type 3 domain-containing protein 733131 10001426 Riean_0680 Riemerella anatipestifer ATCC 11845 = DSM 15868 sh3 type 3 domain-containing protein YP_004045350.1 732328 R 693978 CDS YP_004045351.1 313206174 10001427 complement(733146..734399) 1 NC_014738.1 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: fba:FIC_01433 aminotransferase, class I; PFAM: aminotransferase class I and II; SPTR: Possible aspartate transaminase; PFAM: Aminotransferase class I and II; aminotransferase class i and ii 734399 10001427 Riean_0681 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminotransferase class i and ii YP_004045351.1 733146 R 693978 CDS YP_004045352.1 313206175 10001428 complement(734423..736144) 1 NC_014738.1 COGs: COG1109 Phosphomannomutase; InterPro IPR005841: IPR016066: IPR005844: IPR005845; KEGG: fba:FIC_01434 phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; SPTR: Phosphoglucomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i 736144 10001428 Riean_0682 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i YP_004045352.1 734423 R 693978 CDS YP_004045353.1 313206176 10001429 complement(736168..736872) 1 NC_014738.1 KEGG: fba:FIC_01435 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2807); hypothetical protein 736872 10001429 Riean_0683 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045353.1 736168 R 693978 CDS YP_004045354.1 313206177 10001430 complement(736884..737834) 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fba:FIC_01436 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Probable glycosyltransferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 737834 10001430 Riean_0684 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004045354.1 736884 R 693978 CDS YP_004045355.1 313206178 10001431 complement(737853..738434) 1 NC_014738.1 KEGG: fba:FIC_01437 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 738434 10001431 Riean_0685 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045355.1 737853 R 693978 CDS YP_004045356.1 313206179 10001433 complement(738953..739324) 1 NC_014738.1 InterPro IPR000889: IPR011467; KEGG: fba:FIC_02274 hypothetical protein; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573); hypothetical protein 739324 10001433 Riean_0686 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045356.1 738953 R 693978 CDS YP_004045357.1 313206180 10001434 739540..742158 1 NC_014738.1 COGs: COG0525 Valyl-tRNA synthetase; InterPro IPR019754: IPR001412: IPR002303: IPR002300: IPR 013155: IPR019499; KEGG: fba:FIC_02273 valyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: Valine--tRNA ligase; TIGRFAM: valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 742158 10001434 Riean_0687 Riemerella anatipestifer ATCC 11845 = DSM 15868 valyl-tRNA synthetase YP_004045357.1 739540 D 693978 CDS YP_004045358.1 313206181 10001435 742164..742805 1 NC_014738.1 KEGG: fba:FIC_02272 cytoplasmic protein; SPTR: Probable cytoplasmic protein; hypothetical protein 742805 10001435 Riean_0688 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045358.1 742164 D 693978 CDS YP_004045359.1 313206182 10001436 742821..743714 1 NC_014738.1 COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002139: IPR002173: IPR011611; KEGG: fba:FIC_02271 ribokinase; PFAM: PfkB domain protein; SPTR: Ribokinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; pfkb domain-containing protein 743714 10001436 Riean_0689 Riemerella anatipestifer ATCC 11845 = DSM 15868 pfkb domain-containing protein YP_004045359.1 742821 D 693978 CDS YP_004045360.1 313206183 10001437 743727..744725 1 NC_014738.1 KEGG: fba:FIC_00674 hypothetical protein; SPTR: Acyl-protein synthetase; PFAM: Acyl-protein synthetase, LuxE; hypothetical protein 744725 10001437 Riean_0690 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045360.1 743727 D 693978 CDS YP_004045361.1 313206184 10001438 744783..745373 1 NC_014738.1 KEGG: fjo:Fjoh_1918 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 745373 10001438 Riean_0691 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045361.1 744783 D 693978 CDS YP_004045362.1 313206185 10001439 complement(745447..746925) 1 NC_014738.1 COGs: COG2270 Permease of the major facilitator superfamily; InterPro IPR011701; KEGG: fba:FIC_00966 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Permease; PFAM: Vacuole effluxer Atg22 like; major facilitator superfamily protein 746925 10001439 Riean_0692 Riemerella anatipestifer ATCC 11845 = DSM 15868 major facilitator superfamily protein YP_004045362.1 745447 R 693978 CDS YP_004045363.1 313206186 10001440 complement(747038..748216) 1 NC_014738.1 COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR020615: IPR020610: IPR020613: IPR002155: IPR 020616: IPR020617; KEGG: fba:FIC_00965 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; acetyl-CoA acetyltransferase 748216 10001440 Riean_0693 Riemerella anatipestifer ATCC 11845 = DSM 15868 acetyl-CoA acetyltransferase YP_004045363.1 747038 R 693978 CDS YP_004045364.1 313206187 10001441 complement(748588..750354) 1 NC_014738.1 COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: aag:AaeL_AAEL015629 xaa-pro aminopeptidase; PFAM: peptidase M24; creatinase; PRIAM: Xaa-Pro aminopeptidase; SPTR: Xaa-pro aminopeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; xaa-pro aminopeptidase 750354 10001441 Riean_0694 Riemerella anatipestifer ATCC 11845 = DSM 15868 xaa-pro aminopeptidase YP_004045364.1 748588 R 693978 CDS YP_004045365.1 313206188 10001442 751013..752638 1 NC_014738.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160: IPR005931: IPR015590; KEGG: fba:FIC_02392 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: 1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; delta-1-pyrroline-5-carboxylate dehydrogenase 752638 10001442 Riean_0695 Riemerella anatipestifer ATCC 11845 = DSM 15868 delta-1-pyrroline-5-carboxylate dehydrogenase YP_004045365.1 751013 D 693978 CDS YP_004045366.1 313206189 10001443 complement(752699..753379) 1 NC_014738.1 COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; InterPro IPR003358; KEGG: fba:FIC_01965 tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; PRIAM: tRNA (guanine-N(7)-)-methyltransferase; SPTR: tRNA (Guanine46-N7-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-n(7)-)-methyltransferase 753379 10001443 Riean_0696 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA (guanine-n(7)-)-methyltransferase YP_004045366.1 752699 R 693978 CDS YP_004045367.1 313206190 10001444 complement(753420..754196) 1 NC_014738.1 KEGG: fba:FIC_01967 hypothetical protein; SPTR: Secreted protein; hypothetical protein 754196 10001444 Riean_0697 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045367.1 753420 R 693978 CDS YP_004045368.1 313206191 10001445 complement(754300..754956) 1 NC_014738.1 KEGG: fba:FIC_01718 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 754956 10001445 Riean_0698 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045368.1 754300 R 693978 CDS YP_004045369.1 313206192 10001446 complement(755005..756012) 1 NC_014738.1 COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: fba:FIC_00245 O-succinylbenzoic aciD-CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein; PFAM: AMP-binding enzyme; amp-dependent synthetase and ligase 756012 10001446 Riean_0699 Riemerella anatipestifer ATCC 11845 = DSM 15868 amp-dependent synthetase and ligase YP_004045369.1 755005 R 693978 CDS YP_004045370.1 313206193 10001447 complement(756081..757025) 1 NC_014738.1 InterPro IPR010916; KEGG: fjo:Fjoh_5008 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 757025 10001447 Riean_0700 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045370.1 756081 R 693978 CDS YP_004045371.1 313206194 10001448 complement(757029..758075) 1 NC_014738.1 COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852: IPR009056; KEGG: cat:CA2559_06665 probable cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: Possible cytochrome-c peroxidase; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 758075 10001448 Riean_0701 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytochrome-c peroxidase YP_004045371.1 757029 R 693978 CDS YP_004045372.1 313206195 10001449 complement(758161..758976) 1 NC_014738.1 KEGG: fps:FP0578 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 758976 10001449 Riean_0702 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045372.1 758161 R 693978 CDS YP_004045373.1 313206196 10001450 complement(759137..759475) 1 NC_014738.1 KEGG: cpi:Cpin_6945 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 759475 10001450 Riean_0703 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045373.1 759137 R 693978 CDS YP_004045374.1 313206197 10001451 759634..761556 1 NC_014738.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593: IPR017871: IPR003439; KEGG: fba:FIC_02281 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter; ABC transporter 761556 10001451 Riean_0704 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045374.1 759634 D 693978 CDS YP_004045375.1 313206198 10001452 complement(761686..764544) 1 NC_014738.1 COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; InterPro IPR003437: IPR020580; KEGG: fba:FIC_00985 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like; SPTR: Glycine dehydrogenase (Decarboxylating); TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); glycine dehydrogenase 764544 10001452 Riean_0705 Riemerella anatipestifer ATCC 11845 = DSM 15868 glycine dehydrogenase YP_004045375.1 761686 R 693978 CDS YP_004045376.1 313206199 10001453 complement(764986..765612) 1 NC_014738.1 COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR003095: IPR001623: IPR018253; KEGG: fba:FIC_00983 membrane protein containing heat shock protein D naJ N-terminal domain; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Membrane protein containing heat shock protein D naJ N-terminal domain; PFAM: DnaJ domain; heat shock protein dnaj domain-containing protein 765612 10001453 Riean_0706 Riemerella anatipestifer ATCC 11845 = DSM 15868 heat shock protein dnaj domain-containing protein YP_004045376.1 764986 R 693978 CDS YP_004045377.1 313206200 10001454 complement(765614..766258) 1 NC_014738.1 COGs: COG0702 nucleoside-diphosphate-sugar epimerase; KEGG: coc:Coch_1648 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 766258 10001454 Riean_0707 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045377.1 765614 R 693978 CDS YP_004045378.1 313206201 10001455 complement(766307..766804) 1 NC_014738.1 COGs: COG2077 Peroxiredoxin; InterPro IPR018219: IPR013740: IPR017936; KEGG: fba:FIC_00974 thiol peroxidase, TPX-type; PFAM: Redoxin domain protein; SPTR: Thiol peroxidase; PFAM: Redoxin; thiol peroxidase (atypical 2-cys peroxiredoxin) 766804 10001455 Riean_0708 Riemerella anatipestifer ATCC 11845 = DSM 15868 thiol peroxidase (atypical 2-cys peroxiredoxin) YP_004045378.1 766307 R 693978 CDS YP_004045379.1 313206202 10001456 complement(766957..768345) 1 NC_014738.1 COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR010096: IPR001750; KEGG: fba:FIC_01673 NADH-ubiquinone oxidoreductase chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH dehydrogenase I chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; NADH dehydrogenase subunit n 768345 10001456 Riean_0709 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit n YP_004045379.1 766957 R 693978 CDS YP_004045380.1 313206203 10001457 complement(768366..769850) 1 NC_014738.1 COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR003918: IPR010227: IPR001750; KEGG: fba:FIC_01672 NADH-ubiquinone oxidoreductase chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH dehydrogenase (Quinone); TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; NADH dehydrogenase subunit m 769850 10001457 Riean_0710 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit m YP_004045380.1 768366 R 693978 CDS YP_004045381.1 313206204 10001458 complement(769854..771746) 1 NC_014738.1 COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003916: IPR018393: IPR003945: IPR001516: IPR 001750; KEGG: fba:FIC_01671 NADH-ubiquinone oxidoreductase chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: NADH dehydrogenase I chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; NADH dehydrogenase subunit l 771746 10001458 Riean_0711 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit l YP_004045381.1 769854 R 693978 CDS YP_004045382.1 313206205 10001459 complement(771754..772074) 1 NC_014738.1 COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: fba:FIC_01670 NADH-ubiquinone oxidoreductase chain K; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: NADH-ubiquinone oxidoreductase chain K; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH dehydrogenase subunit k 772074 10001459 Riean_0712 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit k YP_004045382.1 771754 R 693978 CDS YP_004045383.1 313206206 10001460 complement(772087..772584) 1 NC_014738.1 COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: fba:FIC_01669 NADH-ubiquinone oxidoreductase chain J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: NADH dehydrogenase I chain J; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH dehydrogenase subunit j 772584 10001460 Riean_0713 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit j YP_004045383.1 772087 R 693978 CDS YP_004045384.1 313206207 10001461 complement(772588..773115) 1 NC_014738.1 COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR010226: IPR017900: IPR017896; KEGG: fba:FIC_01668 NADH-ubiquinone oxidoreductase chain I; SPTR: NADH-quinone oxidoreductase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH dehydrogenase subunit i 773115 10001461 Riean_0714 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit i YP_004045384.1 772588 R 693978 CDS YP_004045385.1 313206208 10001462 complement(773189..774253) 1 NC_014738.1 COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086: IPR001694; KEGG: fba:FIC_01667 NADH-ubiquinone oxidoreductase chain H; PFAM: respiratory-chain NADH dehydrogenase subunit 1; SPTR: NADH dehydrogenase I, H subunit; PFAM: NADH dehydrogenase; NADH dehydrogenase subunit h 774253 10001462 Riean_0715 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit h YP_004045385.1 773189 R 693978 CDS YP_004045386.1 313206209 10001463 complement(774257..775276) 1 NC_014738.1 COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041: IPR019574; KEGG: fba:FIC_01666 NADH-ubiquinone oxidoreductase chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; SPTR: NADH dehydrogenase I chain G; PFAM: 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; NADH dehydrogenase subunit g 775276 10001463 Riean_0716 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit g YP_004045386.1 774257 R 693978 CDS YP_004045387.1 313206210 10001464 complement(775328..776143) 1 NC_014738.1 KEGG: fps:FP0500 hypothetical protein; SPTR: Probable outermembrane protein; manually curated; hypothetical protein 776143 10001464 Riean_0717 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045387.1 775328 R 693978 CDS YP_004045388.1 313206211 10001465 complement(776145..777506) 1 NC_014738.1 COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR001949: IPR011537: IPR011538: IPR019554: IPR 019575; KEGG: fba:FIC_01665 NADH-ubiquinone oxidoreductase chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase (Quinone); TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit; NADH dehydrogenase subunit f 777506 10001465 Riean_0718 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit f YP_004045388.1 776145 R 693978 CDS YP_004045389.1 313206212 10001466 complement(777519..778031) 1 NC_014738.1 COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: fba:FIC_01664 NADH-ubiquinone oxidoreductase chain E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: NADH-ubiquinone oxidoreductase chain E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; NADH dehydrogenase subunit e 778031 10001466 Riean_0719 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit e YP_004045389.1 777519 R 693978 CDS YP_004045390.1 313206213 10001467 complement(778090..779313) 1 NC_014738.1 COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR014029: IPR001135; KEGG: fba:FIC_01663 NADH-ubiquinone oxidoreductase chain D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase I chain D; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; NADH dehydrogenase subunit d 779313 10001467 Riean_0720 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit d YP_004045390.1 778090 R 693978 CDS YP_004045391.1 313206214 10001468 complement(779349..779843) 1 NC_014738.1 COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR020396: IPR001268; KEGG: fba:FIC_01662 NADH-ubiquinone oxidoreductase chain C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: NADH-quinone oxidoreductase; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; NADH dehydrogenase subunit c 779843 10001468 Riean_0721 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit c YP_004045391.1 779349 R 693978 CDS YP_004045392.1 313206215 10001469 complement(779926..780480) 1 NC_014738.1 COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006138: IPR006137; KEGG: fba:FIC_01661 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase I, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; NADH dehydrogenase subunit b 780480 10001469 Riean_0722 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit b YP_004045392.1 779926 R 693978 CDS YP_004045393.1 313206216 10001470 complement(780524..780889) 1 NC_014738.1 COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: fba:FIC_01660 NADH ubiquinone oxidoreductase chain A; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH dehydrogenase subunit A 780889 10001470 Riean_0723 Riemerella anatipestifer ATCC 11845 = DSM 15868 NADH dehydrogenase subunit A YP_004045393.1 780524 R 693978 CDS YP_004045394.1 313206217 10001471 complement(781013..781192) 1 NC_014738.1 KEGG: fba:FIC_01659 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 781192 10001471 Riean_0724 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045394.1 781013 R 693978 CDS YP_004045395.1 313206218 10001472 complement(781203..782327) 1 NC_014738.1 KEGG: fba:FIC_01658 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 782327 10001472 Riean_0725 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045395.1 781203 R 693978 CDS YP_004045396.1 313206219 10001473 782409..783092 1 NC_014738.1 COGs: COG2738 Zn-dependent protease; InterPro IPR017441: IPR007395; KEGG: fba:FIC_01657 hypothetical protein; PFAM: peptidase membrane zinc metallopeptidase; SPTR: Membrane zinc metallopeptidase; PFAM: Putative neutral zinc metallopeptidase; peptidase membrane zinc metallopeptidase 783092 10001473 Riean_0726 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase membrane zinc metallopeptidase YP_004045396.1 782409 D 693978 CDS YP_004045397.1 313206220 10001474 783298..784398 1 NC_014738.1 COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: fba:FIC_01978 lipiD-A-disaccharide synthase; PFAM: glycosyl transferase family 19; PRIAM: LipiD-A-disaccharide synthase; SPTR: Possible lipiD-A-disaccharide synthase; TIGRFAM: lipiD-A-disaccharide synthase; PFAM: LipiD-A-disaccharide synthetase; TIGRFAM: lipiD-A-disaccharide synthase; lipiD-a-disaccharide synthase 784398 10001474 Riean_0727 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipiD-a-disaccharide synthase YP_004045397.1 783298 D 693978 CDS YP_004045398.1 313206221 10001475 complement(784395..785336) 1 NC_014738.1 COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099: IPR001509: IPR013549; KEGG: cpi:Cpin_7047 domain of unknown function DUF1731; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777; hypothetical protein 785336 10001475 Riean_0728 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045398.1 784395 R 693978 CDS YP_004045399.1 313206222 10001476 complement(785373..787523) 1 NC_014738.1 COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: fba:FIC_01798 dipeptidyl peptidase IV; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Dipeptidyl peptidase IV; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; peptidase s9b dipeptidylpeptidase iv domain-containing protein 787523 10001476 Riean_0729 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase s9b dipeptidylpeptidase iv domain-containing protein YP_004045399.1 785373 R 693978 CDS YP_004045400.1 313206223 10001477 complement(787642..788424) 1 NC_014738.1 COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: fba:FIC_02178 hypothetical protein; PFAM: protein of unknown function DUF477; SPTR: Methanol dehydrogenase beta-propeller domain protein; PFAM: Domain of unknown function (DUF477); hypothetical protein 788424 10001477 Riean_0730 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045400.1 787642 R 693978 CDS YP_004045401.1 313206224 10001478 complement(788405..788836) 1 NC_014738.1 COGs: COG3762 membrane protein; InterPro IPR007621; KEGG: fba:FIC_02179 hypothetical protein; PFAM: protein of unknown function DUF477; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF477); hypothetical protein 788836 10001478 Riean_0731 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045401.1 788405 R 693978 CDS YP_004045402.1 313206225 10001479 complement(788836..789441) 1 NC_014738.1 COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: fba:FIC_02180 LemA protein; PFAM: LemA family protein; SPTR: Membrane protein LemA; PFAM: LemA family; lema family protein 789441 10001479 Riean_0732 Riemerella anatipestifer ATCC 11845 = DSM 15868 lema family protein YP_004045402.1 788836 R 693978 CDS YP_004045403.1 313206226 10001480 789522..790013 1 NC_014738.1 COGs: COG0262 Dihydrofolate reductase; InterPro IPR012259: IPR001796; KEGG: fba:FIC_02181 dihydrofolate reductase; PFAM: dihydrofolate reductase region; PRIAM: Dihydrofolate reductase; SPTR: Possible dihydrofolate reductase type I involved in trimethoprim resistance; PFAM: Dihydrofolate reductase; dihydrofolate reductase 790013 10001480 Riean_0733 Riemerella anatipestifer ATCC 11845 = DSM 15868 dihydrofolate reductase YP_004045403.1 789522 D 693978 CDS YP_004045404.1 313206227 10001481 complement(790024..791328) 1 NC_014738.1 COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR006638: IPR005840: IPR020612: IPR005839: IPR 013848: IPR007197: IPR002792; KEGG: fba:FIC_01927 possible 2-methylthioadenine synthetase; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Possible 2-methylthioadenine synthetase; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family; 30S ribosomal protein s12p methylthiotransferase 791328 10001481 Riean_0734 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein s12p methylthiotransferase YP_004045404.1 790024 R 693978 CDS YP_004045405.1 313206228 10001482 complement(791433..792290) 1 NC_014738.1 COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907: IPR005835; KEGG: fba:FIC_01928 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase 792290 10001482 Riean_0735 Riemerella anatipestifer ATCC 11845 = DSM 15868 glucose-1-phosphate thymidylyltransferase YP_004045405.1 791433 R 693978 CDS YP_004045406.1 313206229 10001483 complement(792295..793377) 1 NC_014738.1 COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888: IPR001509; KEGG: fba:FIC_01929 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dtdp-glucose 4,6-dehydratase 793377 10001483 Riean_0736 Riemerella anatipestifer ATCC 11845 = DSM 15868 dtdp-glucose 4,6-dehydratase YP_004045406.1 792295 R 693978 CDS YP_004045407.1 313206230 10001484 complement(793388..793933) 1 NC_014738.1 COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: fba:FIC_01930 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; PRIAM: dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dtdp-4-dehydrorhamnose 3,5-epimerase 793933 10001484 Riean_0737 Riemerella anatipestifer ATCC 11845 = DSM 15868 dtdp-4-dehydrorhamnose 3,5-epimerase YP_004045407.1 793388 R 693978 CDS YP_004045408.1 313206231 10001485 complement(793966..794550) 1 NC_014738.1 COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: nis:NIS_1249 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; SPTR: Sugar transferase; PFAM: Bacterial sugar transferase; sugar transferase 794550 10001485 Riean_0738 Riemerella anatipestifer ATCC 11845 = DSM 15868 sugar transferase YP_004045408.1 793966 R 693978 CDS YP_004045409.1 313206232 10001486 complement(794706..795839) 1 NC_014738.1 COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: coc:Coch_0714 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: ArnB family DegT/DnrJ/EryC1/StrS family aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; degt/dnrj/eryc1/strs aminotransferase 795839 10001486 Riean_0739 Riemerella anatipestifer ATCC 11845 = DSM 15868 degt/dnrj/eryc1/strs aminotransferase YP_004045409.1 794706 R 693978 CDS YP_004045410.1 313206233 10001487 complement(795879..796622) 1 NC_014738.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR020904: IPR002198; KEGG: slo:Shew_1326 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase sdr 796622 10001487 Riean_0740 Riemerella anatipestifer ATCC 11845 = DSM 15868 short-chain dehydrogenase/reductase sdr YP_004045410.1 795879 R 693978 CDS YP_004045411.1 313206234 10001488 complement(796630..796860) 1 NC_014738.1 InterPro IPR009081; KEGG: bfr:BF0825 acyl carrier protein; SPTR: Acyl carrier protein; acyl carrier protein 796860 10001488 Riean_0741 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyl carrier protein YP_004045411.1 796630 R 693978 CDS YP_004045412.1 313206235 10001489 complement(796869..798455) 1 NC_014738.1 COGs: COG3882 protein involved in methoxymalonyl-ACP biosynthesis; InterPro IPR010037: IPR010033; KEGG: bfr:BF0824 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; PFAM: NLI interacting factor-like phosphatase; TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC; fkbh like protein 798455 10001489 Riean_0742 Riemerella anatipestifer ATCC 11845 = DSM 15868 fkbh like protein YP_004045412.1 796869 R 693978 CDS YP_004045413.1 313206236 10001490 complement(798458..798853) 1 NC_014738.1 KEGG: cac:CA_C2192 lactoylglutathione lyase; SPTR: Methylmalonyl-CoA epimerase; lactoylglutathione lyase 798853 10001490 Riean_0743 Riemerella anatipestifer ATCC 11845 = DSM 15868 lactoylglutathione lyase YP_004045413.1 798458 R 693978 CDS YP_004045414.1 313206237 10001491 complement(798868..799920) 1 NC_014738.1 COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013751: IPR013747; KEGG: bfr:BF0822 3-oxoacyl-[acyl-carrier-protein] synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; beta-ketoacyl-acyl-carrier-protein synthase iii 799920 10001491 Riean_0744 Riemerella anatipestifer ATCC 11845 = DSM 15868 beta-ketoacyl-acyl-carrier-protein synthase iii YP_004045414.1 798868 R 693978 CDS YP_004045415.1 313206238 10001492 complement(799923..800156) 1 NC_014738.1 KEGG: pdi:BDI_0565 acyl carrier protein; SPTR: Putative acyl carrier protein; acyl carrier protein 800156 10001492 Riean_0745 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyl carrier protein YP_004045415.1 799923 R 693978 CDS YP_004045416.1 313206239 10001493 complement(800168..800809) 1 NC_014738.1 KEGG: bfr:BF0818 serine O-acetyltransferase; SPTR: Pilin glycosylation protein; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; serine o-acetyltransferase 800809 10001493 Riean_0746 Riemerella anatipestifer ATCC 11845 = DSM 15868 serine o-acetyltransferase YP_004045416.1 800168 R 693978 CDS YP_004045417.1 313206240 10001494 complement(800812..801417) 1 NC_014738.1 COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: coc:Coch_0716 sugar transferase; PFAM: sugar transferase; SPTR: Putative UDP-galactose phosphate transferase; PFAM: Bacterial sugar transferase; sugar transferase 801417 10001494 Riean_0747 Riemerella anatipestifer ATCC 11845 = DSM 15868 sugar transferase YP_004045417.1 800812 R 693978 CDS YP_004045418.1 313206241 10001495 complement(801410..802567) 1 NC_014738.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cat:CA2559_13003 capsular polysaccharide biosynthesis glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: Capsular polysaccharide biosynthesis glycosyl transferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 802567 10001495 Riean_0748 Riemerella anatipestifer ATCC 11845 = DSM 15868 group 1 glycosyl transferase YP_004045418.1 801410 R 693978 CDS YP_004045419.1 313206242 10001496 complement(802575..804464) 1 NC_014738.1 COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426: IPR000583: IPR001962: IPR017932; KEGG: gfo:GFO_1998 asparagine synthetase [glutamine-hydrolyzing]; PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthase (Glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 804464 10001496 Riean_0749 Riemerella anatipestifer ATCC 11845 = DSM 15868 asparagine synthase YP_004045419.1 802575 R 693978 CDS YP_004045420.1 313206243 10001497 complement(804522..805568) 1 NC_014738.1 KEGG: gfo:GFO_2000 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 805568 10001497 Riean_0750 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045420.1 804522 R 693978 CDS YP_004045421.1 313206244 10001498 complement(805569..806615) 1 NC_014738.1 InterPro IPR001296; KEGG: rme:Rmet_2728 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 806615 10001498 Riean_0751 Riemerella anatipestifer ATCC 11845 = DSM 15868 group 1 glycosyl transferase YP_004045421.1 805569 R 693978 CDS YP_004045422.1 313206245 10001499 complement(806627..807499) 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: str:Sterm_2405 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 807499 10001499 Riean_0752 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004045422.1 806627 R 693978 CDS YP_004045423.1 313206246 10001500 complement(807496..808632) 1 NC_014738.1 KEGG: bpy:Bphyt_4711 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 808632 10001500 Riean_0753 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045423.1 807496 R 693978 CDS YP_004045424.1 313206247 10001501 complement(808661..809761) 1 NC_014738.1 KEGG: bfr:BF1440 capsular polysaccharide polymerase; SPTR: Putative capsular polysaccharide polymerase; hypothetical protein 809761 10001501 Riean_0754 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045424.1 808661 R 693978 CDS YP_004045425.1 313206248 10001502 complement(809848..810810) 1 NC_014738.1 InterPro IPR001173; KEGG: pfl:PFL_5100 O antigen biosynthesis abequosyltransferase RfbV, putative; PFAM: glycosyl transferase family 2; SPTR: O antigen biosynthesis abequosyltransferase rfbV, putative; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 810810 10001502 Riean_0755 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004045425.1 809848 R 693978 CDS YP_004045426.1 313206249 10001503 complement(810785..812143) 1 NC_014738.1 KEGG: coc:Coch_0703 polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; polysaccharide biosynthesis protein 812143 10001503 Riean_0756 Riemerella anatipestifer ATCC 11845 = DSM 15868 polysaccharide biosynthesis protein YP_004045426.1 810785 R 693978 CDS YP_004045427.1 313206250 10001504 complement(812161..813444) 1 NC_014738.1 COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: fba:FIC_00330 UDP-glucose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; SPTR: UDP-N-acetyl-D-galactosamine dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 813444 10001504 Riean_0757 Riemerella anatipestifer ATCC 11845 = DSM 15868 nucleotide sugar dehydrogenase YP_004045427.1 812161 R 693978 CDS YP_004045428.1 313206251 10001505 complement(813461..814435) 1 NC_014738.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fba:FIC_00329 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Possible UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; naD-dependent epimerase/dehydratase 814435 10001505 Riean_0758 Riemerella anatipestifer ATCC 11845 = DSM 15868 naD-dependent epimerase/dehydratase YP_004045428.1 813461 R 693978 CDS YP_004045429.1 313206252 10001506 complement(814447..816819) 1 NC_014738.1 COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: fba:FIC_01945 tyrosine-protein kinase wzc; PFAM: lipopolysaccharide biosynthesis protein; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Tyrosine-protein kinase Ptk; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; capsular exopolysaccharide family protein 816819 10001506 Riean_0759 Riemerella anatipestifer ATCC 11845 = DSM 15868 capsular exopolysaccharide family protein YP_004045429.1 814447 R 693978 CDS YP_004045430.1 313206253 10001507 complement(816852..817658) 1 NC_014738.1 COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR019554; KEGG: fba:FIC_01946 polysaccharide export outer membrane protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: Polysaccharide export protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; polysaccharide export protein 817658 10001507 Riean_0760 Riemerella anatipestifer ATCC 11845 = DSM 15868 polysaccharide export protein YP_004045430.1 816852 R 693978 CDS YP_004045431.1 313206254 10001508 complement(817699..819624) 1 NC_014738.1 COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: fba:FIC_01947 capsular polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Putative UDP-GlcNAc-4,6-dehydratase; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein capd 819624 10001508 Riean_0761 Riemerella anatipestifer ATCC 11845 = DSM 15868 polysaccharide biosynthesis protein capd YP_004045431.1 817699 R 693978 CDS YP_004045432.1 313206255 10001509 complement(819714..820208) 1 NC_014738.1 COGs: COG2137 conserved hypothetical protein; InterPro IPR003783; KEGG: fba:FIC_00324 regulatory protein RecX; PFAM: regulatory protein RecX; SPTR: Regulatory protein RecX; PFAM: RecX family; regulatory protein recx 820208 10001509 Riean_0762 Riemerella anatipestifer ATCC 11845 = DSM 15868 regulatory protein recx YP_004045432.1 819714 R 693978 CDS YP_004045433.1 313206256 10001510 complement(820275..821543) 1 NC_014738.1 COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR019798: IPR001085; KEGG: fba:FIC_00321 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase 821543 10001510 Riean_0763 Riemerella anatipestifer ATCC 11845 = DSM 15868 glycine hydroxymethyltransferase YP_004045433.1 820275 R 693978 CDS YP_004045434.1 313206257 10001511 821724..823361 1 NC_014738.1 COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672: IPR018189; KEGG: fba:FIC_00127 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); PRIAM: Glucose-6-phosphate isomerase; SPTR: Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase 823361 10001511 Riean_0764 Riemerella anatipestifer ATCC 11845 = DSM 15868 glucose-6-phosphate isomerase YP_004045434.1 821724 D 693978 CDS YP_004045435.1 313206258 10001512 823401..824285 1 NC_014738.1 COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; InterPro IPR000672: IPR020867: IPR020630: IPR020631; KEGG: fba:FIC_00126 methylenetetrahydrofolate dehydrogenase (NADP+); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methenyltetrahydrofolate cyclohydrolase; SPTR: Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; 5,10-methylenetetrahydrofolate dehydrogenase (nadp+); methenyltetrahydrofolate cyclohydrolase 824285 10001512 Riean_0765 Riemerella anatipestifer ATCC 11845 = DSM 15868 5,10-methylenetetrahydrofolate dehydrogenase (nadp+); methenyltetrahydrofolate cyclohydrolase YP_004045435.1 823401 D 693978 CDS YP_004045436.1 313206259 10001513 824290..824862 1 NC_014738.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fjo:Fjoh_3955 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; transcriptional regulator, crp/fnr family 824862 10001513 Riean_0766 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, crp/fnr family YP_004045436.1 824290 D 693978 CDS YP_004045437.1 313206260 10001514 824998..825846 1 NC_014738.1 COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR017283: IPR002818; KEGG: bur:Bcep18194_B3049 chaperone protein HchA; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Hydrolase; PFAM: DJ-1/PfpI family; thij/pfpi domain-containing protein 825846 10001514 Riean_0767 Riemerella anatipestifer ATCC 11845 = DSM 15868 thij/pfpi domain-containing protein YP_004045437.1 824998 D 693978 CDS YP_004045438.1 313206261 10001515 complement(825922..826722) 1 NC_014738.1 COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002347: IPR002198; KEGG: fba:FIC_02048 oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short chain dehydrogenase; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase sdr 826722 10001515 Riean_0768 Riemerella anatipestifer ATCC 11845 = DSM 15868 short-chain dehydrogenase/reductase sdr YP_004045438.1 825922 R 693978 CDS YP_004045439.1 313206262 10001516 complement(826727..827959) 1 NC_014738.1 COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; InterPro IPR001986: IPR016228; KEGG: fba:FIC_02047 5-enolpyruvylshikimate-3-phosphate synthase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 827959 10001516 Riean_0769 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-phosphoshikimate 1-carboxyvinyltransferase YP_004045439.1 826727 R 693978 CDS YP_004045440.1 313206263 10001517 complement(827961..828293) 1 NC_014738.1 InterPro IPR012359: IPR004518; KEGG: fba:FIC_02046 hypothetical protein; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: Pyrophosphatase; PFAM: MazG nucleotide pyrophosphohydrolase domain; mazg nucleotide pyrophosphohydrolase 828293 10001517 Riean_0770 Riemerella anatipestifer ATCC 11845 = DSM 15868 mazg nucleotide pyrophosphohydrolase YP_004045440.1 827961 R 693978 CDS YP_004045441.1 313206264 10001518 complement(828306..829697) 1 NC_014738.1 KEGG: fba:FIC_02045 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 829697 10001518 Riean_0771 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045441.1 828306 R 693978 CDS YP_004045442.1 313206265 10001519 829866..830120 1 NC_014738.1 COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: fba:FIC_02044 LSU ribosomal protein L31p; PFAM: ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein l31p 830120 10001519 Riean_0772 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l31p YP_004045442.1 829866 D 693978 CDS YP_004045443.1 313206266 10001520 830212..831372 1 NC_014738.1 KEGG: fba:FIC_02043 glucose-1-phosphate thymidylyltransferase; SPTR: Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 831372 10001520 Riean_0773 Riemerella anatipestifer ATCC 11845 = DSM 15868 glucose-1-phosphate thymidylyltransferase YP_004045443.1 830212 D 693978 CDS YP_004045444.1 313206267 10001521 831509..832855 1 NC_014738.1 COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR006638: IPR020612: IPR005839: IPR006467: IPR 013848: IPR007197; KEGG: fba:FIC_01624 MiaB family protein, possibly involved in tRNA or rRNA modification; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: 2-methylthioadenine synthetase; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; miab-like tRNA modifying enzyme 832855 10001521 Riean_0774 Riemerella anatipestifer ATCC 11845 = DSM 15868 miab-like tRNA modifying enzyme YP_004045444.1 831509 D 693978 CDS YP_004045445.1 313206268 10001522 complement(832910..834673) 1 NC_014738.1 COGs: COG0018 Arginyl-tRNA synthetase; InterPro IPR015945: IPR001278: IPR001412: IPR005148: IPR 008909; KEGG: fba:FIC_00246 arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain protein; Arginyl-tRNA synthetase, class Ic, core; arginyl tRNA synthetase domain protein; PRIAM: Arginine--tRNA ligase; SPTR: Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 834673 10001522 Riean_0775 Riemerella anatipestifer ATCC 11845 = DSM 15868 arginyl-tRNA synthetase YP_004045445.1 832910 R 693978 CDS YP_004045446.1 313206269 10001523 complement(834760..836247) 1 NC_014738.1 KEGG: fjo:Fjoh_0404 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 836247 10001523 Riean_0776 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045446.1 834760 R 693978 CDS YP_004045447.1 313206270 10001524 complement(836270..839263) 1 NC_014738.1 COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: fjo:Fjoh_0403 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Probable outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor plug 839263 10001524 Riean_0777 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004045447.1 836270 R 693978 CDS YP_004045448.1 313206271 10001525 839396..839980 1 NC_014738.1 COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: fba:FIC_00249 ribonuclease HII; PFAM: ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: Ribonuclease; PFAM: Ribonuclease HII; ribonuclease h 839980 10001525 Riean_0778 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribonuclease h YP_004045448.1 839396 D 693978 CDS YP_004045449.1 313206272 10001526 complement(840084..841874) 1 NC_014738.1 COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR001708: IPR019998: IPR020001; KEGG: fba:FIC_00250 OxaI/YidC membrane insertion protein; PFAM: 60 kDa inner membrane insertion protein; SPTR: OxaI/YidC membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; protein translocase subunit yidc 841874 10001526 Riean_0779 Riemerella anatipestifer ATCC 11845 = DSM 15868 protein translocase subunit yidc YP_004045449.1 840084 R 693978 CDS YP_004045450.1 313206273 10001527 complement(841958..843574) 1 NC_014738.1 COGs: COG0504 CTP synthase (UTP-ammonia lyase); InterPro IPR004468: IPR017456: IPR000991: IPR017926; KEGG: fba:FIC_00251 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 843574 10001527 Riean_0780 Riemerella anatipestifer ATCC 11845 = DSM 15868 CTP synthase YP_004045450.1 841958 R 693978 CDS YP_004045451.1 313206274 10001528 complement(843719..844750) 1 NC_014738.1 COGs: COG0468 RecA/RadA recombinase; InterPro IPR001553: IPR003593: IPR013765: IPR020584: IPR 020588: IPR020587; KEGG: fba:FIC_00240 RecA protein; PFAM: RecA domain protein; SMART: AAA ATPase; SPTR: Protein recA; TIGRFAM: recA protein; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; reca protein 844750 10001528 Riean_0781 Riemerella anatipestifer ATCC 11845 = DSM 15868 reca protein YP_004045451.1 843719 R 693978 CDS YP_004045452.1 313206275 10001529 complement(844847..845929) 1 NC_014738.1 COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR001126: IPR017963; KEGG: fba:FIC_02189 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein; PRIAM: DNA-directed DNA polymerase; SPTR: DNA-directed DNA polymerase; manually curated; PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; DNA-directed DNA polymerase 845929 10001529 Riean_0782 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA-directed DNA polymerase YP_004045452.1 844847 R 693978 CDS YP_004045453.1 313206276 10001530 complement(846015..846785) 1 NC_014738.1 COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR006058: IPR017896; KEGG: fba:FIC_01974 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; SPTR: Succinate dehydrogenase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase/fumarate reductase iron-sulfur subunit 846785 10001530 Riean_0783 Riemerella anatipestifer ATCC 11845 = DSM 15868 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_004045453.1 846015 R 693978 CDS YP_004045454.1 313206277 10001531 complement(846809..848821) 1 NC_014738.1 COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR011280: IPR003953: IPR004112; KEGG: fba:FIC_01975 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: Succinate dehydrogenase; SPTR: Succinate dehydrogenase; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunit 848821 10001531 Riean_0784 Riemerella anatipestifer ATCC 11845 = DSM 15868 succinate dehydrogenase or fumarate reductase, flavoprotein subunit YP_004045454.1 846809 R 693978 CDS YP_004045455.1 313206278 10001532 complement(848886..849554) 1 NC_014738.1 InterPro IPR011138; KEGG: fba:FIC_01976 succinate dehydrogenase cytochrome b subunit; SPTR: Succinate dehydrogenase, cytochrome b558 subunit; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 849554 10001532 Riean_0785 Riemerella anatipestifer ATCC 11845 = DSM 15868 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_004045455.1 848886 R 693978 CDS YP_004045456.1 313206279 10001533 complement(849679..851487) 1 NC_014738.1 COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: fba:FIC_01977 competence protein; PFAM: ComEC/Rec2-related protein; SPTR: Competence protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; ComEC/rec2-like protein 851487 10001533 Riean_0786 Riemerella anatipestifer ATCC 11845 = DSM 15868 ComEC/rec2-like protein YP_004045456.1 849679 R 693978 CDS YP_004045457.1 313206280 10001534 complement(851537..851974) 1 NC_014738.1 KEGG: pfs:PFLU5108 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 851974 10001534 Riean_0787 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045457.1 851537 R 693978 CDS YP_004045458.1 313206281 10001535 complement(851974..853602) 1 NC_014738.1 COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022: IPR011762: IPR011763; KEGG: fba:FIC_00433 methylcrotonyl-CoA carboxylase carboxyl transferase subunit; PFAM: carboxyl transferase; PRIAM: Methylcrotonoyl-CoA carboxylase; SPTR: Methylcrotonoyl-CoA carboxylase; PFAM: Carboxyl transferase domain; methylcrotonoyl-CoA carboxylase 853602 10001535 Riean_0788 Riemerella anatipestifer ATCC 11845 = DSM 15868 methylcrotonoyl-CoA carboxylase YP_004045458.1 851974 R 693978 CDS YP_004045459.1 313206282 10001536 complement(853707..854894) 1 NC_014738.1 InterPro IPR005135; KEGG: fba:FIC_02378 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/Exonuclease/phosphatase family protein; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase 854894 10001536 Riean_0789 Riemerella anatipestifer ATCC 11845 = DSM 15868 endonuclease/exonuclease/phosphatase YP_004045459.1 853707 R 693978 CDS YP_004045460.1 313206283 10001537 855172..857979 1 NC_014738.1 KEGG: fba:FIC_02377 hypothetical protein; SPTR: TonB-dependent outer membrane receptor; hypothetical protein 857979 10001537 Riean_0790 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045460.1 855172 D 693978 CDS YP_004045461.1 313206284 10001538 858005..859408 1 NC_014738.1 KEGG: fps:FP2239 lipoprotein; SPTR: Putative uncharacterized protein; lipoprotein 859408 10001538 Riean_0791 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipoprotein YP_004045461.1 858005 D 693978 CDS YP_004045462.1 313206285 10001539 859506..859685 1 NC_014738.1 KEGG: pbe:PB105828.00.0 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 859685 10001539 Riean_0792 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045462.1 859506 D 693978 CDS YP_004045463.1 313206286 10001540 complement(860765..861103) 1 NC_014738.1 COGs: COG3512 conserved hypothetical protein; InterPro IPR021127: IPR019199; KEGG: bfs:BF3950 hypothetical protein; PFAM: Virulence-associated protein D / CRISPR associated protein Cas2; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; CRISPR-associated protein, cas2 family 861103 10001540 Riean_0793 Riemerella anatipestifer ATCC 11845 = DSM 15868 CRISPR-associated protein, cas2 family YP_004045463.1 860765 R 693978 CDS YP_004045464.1 313206287 10001541 complement(861093..861992) 1 NC_014738.1 COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR019855: IPR002729; KEGG: fps:FP1525 CRISPR-associated Cas1 family protein; PFAM: protein of unknown function DUF48; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, NMENI subtype; CRISPR-associated endonuclease Cas1; CRISPR-associated protein, cas1 family 861992 10001541 Riean_0794 Riemerella anatipestifer ATCC 11845 = DSM 15868 CRISPR-associated protein, cas1 family YP_004045464.1 861093 R 693978 CDS YP_004045465.1 313206288 10001543 866459..867394 1 NC_014738.1 COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: fba:FIC_00456 2-nitropropane dioxygenase, NPD; PFAM: 2-nitropropane dioxygenase NPD; SPTR: Enoyl-[acyl-carrier-protein] reductase (NADH); PFAM: 2-nitropropane dioxygenase; TIGRFAM: enoyl-(acyl-carrier-protein) reductase II; 2-nitropropane dioxygenase npd 867394 10001543 Riean_0796 Riemerella anatipestifer ATCC 11845 = DSM 15868 2-nitropropane dioxygenase npd YP_004045465.1 866459 D 693978 CDS YP_004045466.1 313206289 10001544 complement(867440..867769) 1 NC_014738.1 KEGG: fps:FP2399 ferredoxin; SPTR: 2Fe-2S ferredoxin (Andrenodoxin-like); PFAM: 2Fe-2S iron-sulfur cluster binding domain; ferredoxin 867769 10001544 Riean_0797 Riemerella anatipestifer ATCC 11845 = DSM 15868 ferredoxin YP_004045466.1 867440 R 693978 CDS YP_004045467.1 313206290 10001545 complement(867775..868827) 1 NC_014738.1 COGs: COG0492 Thioredoxin reductase; InterPro IPR000103: IPR013027; KEGG: fba:FIC_01562 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Thioredoxin-disulfide reductase, NADP-thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; faD-dependent pyridine nucleotide-disulfide oxidoreductase 868827 10001545 Riean_0798 Riemerella anatipestifer ATCC 11845 = DSM 15868 faD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004045467.1 867775 R 693978 CDS YP_004045468.1 313206291 10001546 868965..869732 1 NC_014738.1 KEGG: fba:FIC_01563 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3108); ATP-dependent exonuclease v subunit alpha 869732 10001546 Riean_0799 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-dependent exonuclease v subunit alpha YP_004045468.1 868965 D 693978 CDS YP_004045469.1 313206292 10001547 869762..870262 1 NC_014738.1 InterPro IPR018914; KEGG: fba:FIC_01979 hypothetical protein; PFAM: Protein of unknown function DUF2480; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2480); hypothetical protein 870262 10001547 Riean_0800 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045469.1 869762 D 693978 CDS YP_004045470.1 313206293 10001548 870310..870975 1 NC_014738.1 InterPro IPR007317; KEGG: fba:FIC_01981 hypothetical protein; PFAM: Uncharacterised protein family UPF0363; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF937); hypothetical protein 870975 10001548 Riean_0801 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045470.1 870310 D 693978 CDS YP_004045471.1 313206294 10001549 871127..872101 1 NC_014738.1 COGs: COG1899 Deoxyhypusine synthase; InterPro IPR002773; KEGG: fba:FIC_00242 deoxyhypusine synthase; PFAM: deoxyhypusine synthase; SPTR: Deoxyhypusine synthase; PFAM: Deoxyhypusine synthase; TIGRFAM: deoxyhypusine synthase; homospermidine synthase 872101 10001549 Riean_0802 Riemerella anatipestifer ATCC 11845 = DSM 15868 homospermidine synthase YP_004045471.1 871127 D 693978 CDS YP_004045472.1 313206295 10001550 872206..872733 1 NC_014738.1 KEGG: fba:FIC_02369 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 872733 10001550 Riean_0803 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045472.1 872206 D 693978 CDS YP_004045473.1 313206296 10001551 872717..873151 1 NC_014738.1 KEGG: fba:FIC_02368 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 873151 10001551 Riean_0804 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045473.1 872717 D 693978 CDS YP_004045474.1 313206297 10001552 complement(873214..873450) 1 NC_014738.1 COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: fba:FIC_02255 nitrogen-fixing NifU, C-terminal; PFAM: nitrogen-fixing NifU domain protein; SPTR: NifU family protein; PFAM: NifU-like domain; nitrogen-fixing nifu domain-containing protein 873450 10001552 Riean_0805 Riemerella anatipestifer ATCC 11845 = DSM 15868 nitrogen-fixing nifu domain-containing protein YP_004045474.1 873214 R 693978 CDS YP_004045475.1 313206298 10001553 complement(873484..874587) 1 NC_014738.1 COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR000808: IPR019591; KEGG: fba:FIC_02256 septum site-determining protein MinD; PFAM: ATPase-like, ParA/MinD; SPTR: Chromosome partitioning ATPase; PFAM: ParA/MinD ATPase like; Anion-transporting ATPase; ATPase-like, para/mind 874587 10001553 Riean_0806 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATPase-like, para/mind YP_004045475.1 873484 R 693978 CDS YP_004045476.1 313206299 10001554 complement(874645..875895) 1 NC_014738.1 COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: fjo:Fjoh_4575 sodium:dicarboxylate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: DAACS family dicarboxylate/amino acid:cation symporter; PFAM: Sodium:dicarboxylate symporter family; sodium:dicarboxylate symporter 875895 10001554 Riean_0807 Riemerella anatipestifer ATCC 11845 = DSM 15868 sodium:dicarboxylate symporter YP_004045476.1 874645 R 693978 CDS YP_004045477.1 313206300 10001555 complement(876011..876427) 1 NC_014738.1 InterPro IPR013247: IPR001452; KEGG: fba:FIC_02258 hypothetical protein; PFAM: SH3 type 3 domain protein; SPTR: Possible peptidoglycan-binding LysM; PFAM: Bacterial SH3 domain; sh3 type 3 domain-containing protein 876427 10001555 Riean_0808 Riemerella anatipestifer ATCC 11845 = DSM 15868 sh3 type 3 domain-containing protein YP_004045477.1 876011 R 693978 CDS YP_004045478.1 313206301 10001556 complement(876438..876917) 1 NC_014738.1 InterPro IPR007055; KEGG: fba:FIC_02259 hypothetical protein; PFAM: transport-associated; SPTR: Transport-associated protein; PFAM: Putative phospholipiD-binding domain; transport-associated protein 876917 10001556 Riean_0809 Riemerella anatipestifer ATCC 11845 = DSM 15868 transport-associated protein YP_004045478.1 876438 R 693978 CDS YP_004045479.1 313206302 10001557 877078..877845 1 NC_014738.1 COGs: COG3757 Lyzozyme M1 (1 4-beta-N-acetylmuramidase); InterPro IPR018077: IPR002053; KEGG: fba:FIC_01834 glycoside hydrolase, family 25; PFAM: glycoside hydrolase family 25; SMART: Glycoside hydrolase, family 25 subgroup; SPTR: Family 25 glycoside hydrolase; PFAM: Glycosyl hydrolases family 25; glycoside hydrolase 877845 10001557 Riean_0810 Riemerella anatipestifer ATCC 11845 = DSM 15868 glycoside hydrolase YP_004045479.1 877078 D 693978 CDS YP_004045480.1 313206303 10001558 complement(877926..880115) 1 NC_014738.1 COGs: COG4772 Outer membrane receptor for Fe3+-dicitrate; InterPro IPR012910: IPR000531; KEGG: rbi:RB2501_11352 TonB-dependent outer membrane protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB dependent/liganD-gated channel; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor 880115 10001558 Riean_0811 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004045480.1 877926 R 693978 CDS YP_004045481.1 313206304 10001559 complement(880337..881761) 1 NC_014738.1 InterPro IPR000866: IPR017936; KEGG: fba:FIC_01973 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen 881761 10001559 Riean_0812 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen YP_004045481.1 880337 R 693978 CDS YP_004045482.1 313206305 10001560 881926..882786 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_00050 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 882786 10001560 Riean_0813 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045482.1 881926 D 693978 CDS YP_004045483.1 313206306 10001561 complement(882828..883292) 1 NC_014738.1 KEGG: fba:FIC_00152 hypothetical protein; SPTR: Cytochrome c; hypothetical protein 883292 10001561 Riean_0814 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045483.1 882828 R 693978 CDS YP_004045484.1 313206307 10001562 complement(883304..884944) 1 NC_014738.1 KEGG: fba:FIC_00153 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 884944 10001562 Riean_0815 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045484.1 883304 R 693978 CDS YP_004045485.1 313206308 10001563 complement(884991..886340) 1 NC_014738.1 COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504: IPR003593; KEGG: fba:FIC_00254 DNA repair protein RadA; SMART: AAA ATPase; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; DNA repair protein rada 886340 10001563 Riean_0816 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA repair protein rada YP_004045485.1 884991 R 693978 CDS YP_004045486.1 313206309 10001564 886434..887198 1 NC_014738.1 COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: fba:FIC_01987 methylglutaconyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/isomerase 887198 10001564 Riean_0817 Riemerella anatipestifer ATCC 11845 = DSM 15868 enoyl-CoA hydratase/isomerase YP_004045486.1 886434 D 693978 CDS YP_004045487.1 313206310 10001571 complement(895019..895909) 1 NC_014738.1 COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: chu:CHU_1402 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF72; hypothetical protein 895909 10001571 Riean_0819 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045487.1 895019 R 693978 CDS YP_004045488.1 313206311 10001572 complement(895940..897022) 1 NC_014738.1 COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fjo:Fjoh_1219 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase; beta-lactamase 897022 10001572 Riean_0820 Riemerella anatipestifer ATCC 11845 = DSM 15868 beta-lactamase YP_004045488.1 895940 R 693978 CDS YP_004045489.1 313206312 10001573 complement(897133..898788) 1 NC_014738.1 InterPro IPR000788: IPR013350; KEGG: fba:FIC_01815 ribonucleotide-diphosphate reductase subunit alpha; PFAM: ribonucleotide reductase large subunit; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, alpha chain; PFAM: Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha chain; ribonucleoside-diphosphate reductase subunit alpha 898788 10001573 Riean_0821 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribonucleoside-diphosphate reductase subunit alpha YP_004045489.1 897133 R 693978 CDS YP_004045490.1 313206313 10001574 complement(898836..899810) 1 NC_014738.1 COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR000358; KEGG: fba:FIC_01816 ribonucleotide reductase of class Ia (aerobic), beta subunit; PFAM: ribonucleotide reductase; SPTR: Ribonucleotide reductase of class Ia (Aerobic), beta subunit; PFAM: Ribonucleotide reductase, small chain; ribonucleotide reductase 899810 10001574 Riean_0822 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribonucleotide reductase YP_004045490.1 898836 R 693978 CDS YP_004045491.1 313206314 10001575 complement(900120..900773) 1 NC_014738.1 COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: fba:FIC_00666 competence protein; PFAM: phosphoribosyltransferase; SPTR: Competence protein; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; phosphoribosyltransferase 900773 10001575 Riean_0823 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoribosyltransferase YP_004045491.1 900120 R 693978 CDS YP_004045492.1 313206315 10001577 complement(900995..901546) 1 NC_014738.1 KEGG: fba:FIC_01821 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 901546 10001577 Riean_0824 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045492.1 900995 R 693978 CDS YP_004045493.1 313206316 10001578 complement(901601..902251) 1 NC_014738.1 COGs: COG1418 HD superfamily hydrolase; InterPro IPR003607: IPR006674; KEGG: fba:FIC_01822 HD domain protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Hydrolase; PFAM: HD domain; metal dependent phosphohydrolase 902251 10001578 Riean_0825 Riemerella anatipestifer ATCC 11845 = DSM 15868 metal dependent phosphohydrolase YP_004045493.1 901601 R 693978 CDS YP_004045494.1 313206317 10001579 complement(902383..903840) 1 NC_014738.1 COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006095: IPR014362: IPR006097: IPR006096; KEGG: fba:FIC_00024 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: Glutamate dehydrogenase (NADP(+)); SPTR: Glutamate dehydrogenase; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; glutamate dehydrogenase (nad) 903840 10001579 Riean_0826 Riemerella anatipestifer ATCC 11845 = DSM 15868 glutamate dehydrogenase (nad) YP_004045494.1 902383 R 693978 CDS YP_004045495.1 313206318 10001580 complement(903925..905028) 1 NC_014738.1 COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: fba:FIC_00025 smf protein DNA processing chain A; PFAM: SMF family protein; SPTR: Smf protein DNA processing chain A; TIGRFAM: DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; DNA protecting protein dpra 905028 10001580 Riean_0827 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA protecting protein dpra YP_004045495.1 903925 R 693978 CDS YP_004045496.1 313206319 10001581 complement(905031..905408) 1 NC_014738.1 KEGG: fba:FIC_00021 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial-like globin; hypothetical protein 905408 10001581 Riean_0828 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045496.1 905031 R 693978 CDS YP_004045497.1 313206320 10001582 complement(905419..905973) 1 NC_014738.1 COGs: COG0817 Holliday junction resolvasome endonuclease subunit; InterPro IPR002176: IPR020563; KEGG: fba:FIC_00384 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease ruvc 905973 10001582 Riean_0829 Riemerella anatipestifer ATCC 11845 = DSM 15868 crossover junction endodeoxyribonuclease ruvc YP_004045497.1 905419 R 693978 CDS YP_004045498.1 313206321 10001583 complement(905997..907187) 1 NC_014738.1 KEGG: phe:Phep_3796 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 907187 10001583 Riean_0830 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045498.1 905997 R 693978 CDS YP_004045499.1 313206322 10001584 complement(907217..907690) 1 NC_014738.1 COGs: COG1522 Transcriptional regulators; InterPro IPR000485: IPR019888: IPR019887; KEGG: coc:Coch_1628 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; SPTR: Proline dehydrogenase transcriptional activator; PFAM: AsnC family; ArsR family transcriptional regulator 907690 10001584 Riean_0831 Riemerella anatipestifer ATCC 11845 = DSM 15868 ArsR family transcriptional regulator YP_004045499.1 907217 R 693978 CDS YP_004045500.1 313206323 10001585 908038..910968 1 NC_014738.1 InterPro IPR012910: IPR000531; KEGG: cpi:Cpin_1552 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; tonb-dependent receptor plug 910968 10001585 Riean_0832 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004045500.1 908038 D 693978 CDS YP_004045501.1 313206324 10001586 910983..912419 1 NC_014738.1 KEGG: cpi:Cpin_6565 RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family; ragb/susd domain-containing protein 912419 10001586 Riean_0833 Riemerella anatipestifer ATCC 11845 = DSM 15868 ragb/susd domain-containing protein YP_004045501.1 910983 D 693978 CDS YP_004045502.1 313206325 10001587 912586..913170 1 NC_014738.1 COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; InterPro IPR000085: IPR013849: IPR011114; KEGG: fba:FIC_00395 Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SPTR: Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; holliday junction DNA helicase subunit ruva 913170 10001587 Riean_0834 Riemerella anatipestifer ATCC 11845 = DSM 15868 holliday junction DNA helicase subunit ruva YP_004045502.1 912586 D 693978 CDS YP_004045503.1 313206326 10001588 913176..920198 1 NC_014738.1 KEGG: fba:FIC_00396 hypothetical protein; SPTR: Putative uncharacterized protein; gliding motility protein spra 920198 10001588 Riean_0835 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein spra YP_004045503.1 913176 D 693978 CDS YP_004045504.1 313206327 10001589 920304..920747 1 NC_014738.1 COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: fba:FIC_00671 queuosine biosynthesis QueD, PTPS-I; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: Queuosine biosynthesis QueD, PTPS-I; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; 6-pyruvoyl-tetrahydropterin synthase 920747 10001589 Riean_0836 Riemerella anatipestifer ATCC 11845 = DSM 15868 6-pyruvoyl-tetrahydropterin synthase YP_004045504.1 920304 D 693978 CDS YP_004045505.1 313206328 10001590 920775..921542 1 NC_014738.1 COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: fba:FIC_00672 UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; SPTR: UDP-2,3-diacylglucosamine hydrolase; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 921542 10001590 Riean_0837 Riemerella anatipestifer ATCC 11845 = DSM 15868 metallophosphoesterase YP_004045505.1 920775 D 693978 CDS YP_004045506.1 313206329 10001591 921539..922381 1 NC_014738.1 COGs: COG4757 alpha/beta hydrolase; InterPro IPR017208: IPR000073; KEGG: fba:FIC_02270 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Possible alpha/beta hydrolase; alpha/beta fold family hydrolase 922381 10001591 Riean_0838 Riemerella anatipestifer ATCC 11845 = DSM 15868 alpha/beta fold family hydrolase YP_004045506.1 921539 D 693978 CDS YP_004045507.1 313206330 10001592 complement(922437..924551) 1 NC_014738.1 COGs: COG1505 Serine protease of the peptidase family S9A; InterPro IPR002470: IPR002471: IPR004106; KEGG: fba:FIC_02481 prolyl endopeptidase precursor; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; PRIAM: Prolyl oligopeptidase; SPTR: Prolyl endopeptidase; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; prolyl oligopeptidase 924551 10001592 Riean_0839 Riemerella anatipestifer ATCC 11845 = DSM 15868 prolyl oligopeptidase YP_004045507.1 922437 R 693978 CDS YP_004045508.1 313206331 10001593 complement(924562..925011) 1 NC_014738.1 COGs: COG1225 Peroxiredoxin; InterPro IPR000866: IPR017936; KEGG: fba:FIC_00033 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen 925011 10001593 Riean_0840 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen YP_004045508.1 924562 R 693978 CDS YP_004045509.1 313206332 10001594 925044..925670 1 NC_014738.1 COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265: IPR004036: IPR005759; KEGG: fba:FIC_00034 endonuclease III; PFAM: HhH-GPD family protein; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; SPTR: Possible DNA-(Apurinic or apyrimidinic site) lyase; TIGRFAM: endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; endonuclease iii 925670 10001594 Riean_0841 Riemerella anatipestifer ATCC 11845 = DSM 15868 endonuclease iii YP_004045509.1 925044 D 693978 CDS YP_004045510.1 313206333 10001595 complement(925766..926734) 1 NC_014738.1 COGs: COG0264 Translation elongation factor Ts; InterPro IPR001816: IPR018101: IPR000449: IPR014039; KEGG: fjo:Fjoh_1609 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associateD- domain-containing protein; SPTR: Elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; translation elongation factor ts (ef-ts) 926734 10001595 Riean_0842 Riemerella anatipestifer ATCC 11845 = DSM 15868 translation elongation factor ts (ef-ts) YP_004045510.1 925766 R 693978 CDS YP_004045511.1 313206334 10001596 926867..927451 1 NC_014738.1 KEGG: fba:FIC_02160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 927451 10001596 Riean_0843 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045511.1 926867 D 693978 CDS YP_004045512.1 313206335 10001597 complement(927529..928485) 1 NC_014738.1 COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; InterPro IPR001095: IPR020582: IPR011763; KEGG: fba:FIC_02144 acetyl-coenzyme A carboxyl transferase alpha chain; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 928485 10001597 Riean_0844 Riemerella anatipestifer ATCC 11845 = DSM 15868 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_004045512.1 927529 R 693978 CDS YP_004045513.1 313206336 10001598 complement(928539..930050) 1 NC_014738.1 COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020060: IPR001412: IPR004527: IPR020058; KEGG: fba:FIC_02145 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; PRIAM: Glutamate--tRNA ligase; SPTR: Glutamate--tRNA ligase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase 930050 10001598 Riean_0845 Riemerella anatipestifer ATCC 11845 = DSM 15868 glutamyl-tRNA synthetase YP_004045513.1 928539 R 693978 CDS YP_004045514.1 313206337 10001599 930210..931736 1 NC_014738.1 InterPro IPR004993; KEGG: fba:FIC_02458 auxin-regulated protein; PFAM: GH3 auxin-responsive promoter; SPTR: GH3 auxin-responsive promoter family protein; PFAM: GH3 auxin-responsive promoter; gh3 auxin-responsive promoter 931736 10001599 Riean_0846 Riemerella anatipestifer ATCC 11845 = DSM 15868 gh3 auxin-responsive promoter YP_004045514.1 930210 D 693978 CDS YP_004045515.1 313206338 10001600 complement(931818..934409) 1 NC_014738.1 COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR001270: IPR003593: IPR018368: IPR017730: IPR 004176: IPR003959: IPR013093: IPR019489: IPR001313; KEGG: fba:FIC_02283 ClpB protein; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: Chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; ATP-dependent chaperone clpb 934409 10001600 Riean_0847 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-dependent chaperone clpb YP_004045515.1 931818 R 693978 CDS YP_004045516.1 313206339 10001601 934680..935243 1 NC_014738.1 COGs: COG0193 Peptidyl-tRNA hydrolase; InterPro IPR001328: IPR018171; KEGG: fba:FIC_02344 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 935243 10001601 Riean_0848 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidyl-tRNA hydrolase YP_004045516.1 934680 D 693978 CDS YP_004045517.1 313206340 10001602 complement(935253..936377) 1 NC_014738.1 KEGG: bvu:BVU_1234 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 936377 10001602 Riean_0849 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045517.1 935253 R 693978 CDS YP_004045518.1 313206341 10001603 complement(936362..937270) 1 NC_014738.1 InterPro IPR000326; KEGG: bth:BT_3074 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SPTR: PAP2 family protein; PFAM: PAP2 superfamily; phosphoesterase pa-phosphatase-like protein 937270 10001603 Riean_0850 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoesterase pa-phosphatase-like protein YP_004045518.1 936362 R 693978 CDS YP_004045519.1 313206342 10001604 937435..941481 1 NC_014738.1 KEGG: fba:FIC_00184 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 941481 10001604 Riean_0851 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045519.1 937435 D 693978 CDS YP_004045520.1 313206343 10001605 941492..942559 1 NC_014738.1 COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: rlg:Rleg_4908 acyltransferase 3; PFAM: acyltransferase 3; SPTR: Putative uncharacterized protein; PFAM: Acyltransferase family; acyltransferase 3 942559 10001605 Riean_0852 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyltransferase 3 YP_004045520.1 941492 D 693978 CDS YP_004045521.1 313206344 10001606 complement(942685..944289) 1 NC_014738.1 COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: fba:FIC_02342 sulphate transporter; PFAM: sulphate transporter; SPTR: Integral membrane sulfate transporter; PFAM: Sulfate transporter family; sulfate transporter 944289 10001606 Riean_0853 Riemerella anatipestifer ATCC 11845 = DSM 15868 sulfate transporter YP_004045521.1 942685 R 693978 CDS YP_004045522.1 313206345 10001607 complement(944431..944727) 1 NC_014738.1 KEGG: fba:FIC_02341 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 944727 10001607 Riean_0854 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045522.1 944431 R 693978 CDS YP_004045523.1 313206346 10001608 complement(944739..945422) 1 NC_014738.1 COGs: COG0288 Carbonic anhydrase; InterPro IPR015892: IPR001765; KEGG: fba:FIC_02340 carbonic anhydrase; PFAM: carbonic anhydrase; PRIAM: Carbonate dehydratase; SPTR: Carbonic anhydrase; PFAM: Carbonic anhydrase; carbonate dehydratase 945422 10001608 Riean_0855 Riemerella anatipestifer ATCC 11845 = DSM 15868 carbonate dehydratase YP_004045523.1 944739 R 693978 CDS YP_004045524.1 313206347 10001609 complement(945556..946113) 1 NC_014738.1 COGs: COG1045 Serine acetyltransferase; InterPro IPR018357: IPR001451; KEGG: fba:FIC_02339 Hexapeptide transferase family protein; PFAM: transferase hexapeptide repeat containing protein; SPTR: Possible colanic acid O-acetyltransferase II; PFAM: Bacterial transferase hexapeptide (three repeats); transferase hexapeptide repeat containing protein 946113 10001609 Riean_0856 Riemerella anatipestifer ATCC 11845 = DSM 15868 transferase hexapeptide repeat containing protein YP_004045524.1 945556 R 693978 CDS YP_004045525.1 313206348 10001610 complement(946325..947473) 1 NC_014738.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fba:FIC_02338 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 947473 10001610 Riean_0857 Riemerella anatipestifer ATCC 11845 = DSM 15868 group 1 glycosyl transferase YP_004045525.1 946325 R 693978 CDS YP_004045526.1 313206349 10001611 complement(947476..948309) 1 NC_014738.1 KEGG: bpo:BP951000_2049 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 948309 10001611 Riean_0858 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045526.1 947476 R 693978 CDS YP_004045527.1 313206350 10001612 complement(948506..949927) 1 NC_014738.1 COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: fps:FP1411 sugar O-acetyltransferase precursor; PFAM: membrane bound O-acyl transferase MBOAT family protein; SPTR: Alginate O-acetylation protein; PFAM: MBOAT family; membrane bound o-acyl transferase mboat family protein 949927 10001612 Riean_0859 Riemerella anatipestifer ATCC 11845 = DSM 15868 membrane bound o-acyl transferase mboat family protein YP_004045527.1 948506 R 693978 CDS YP_004045528.1 313206351 10001613 complement(949932..950852) 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: apb:SAR116_1957 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 950852 10001613 Riean_0860 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004045528.1 949932 R 693978 CDS YP_004045529.1 313206352 10001614 complement(950865..952031) 1 NC_014738.1 COGs: COG0438 Glycosyltransferase; InterPro IPR006061: IPR001296; KEGG: fba:FIC_02337 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 952031 10001614 Riean_0861 Riemerella anatipestifer ATCC 11845 = DSM 15868 group 1 glycosyl transferase YP_004045529.1 950865 R 693978 CDS YP_004045530.1 313206353 10001616 953251..954588 1 NC_014738.1 COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR002195: IPR004722: IPR006680; KEGG: fba:FIC_00226 dihydroorotase; PFAM: amidohydrolase; SPTR: Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; dihydroorotase 954588 10001616 Riean_0863 Riemerella anatipestifer ATCC 11845 = DSM 15868 dihydroorotase YP_004045530.1 953251 D 693978 CDS YP_004045531.1 313206354 10001617 954626..957550 1 NC_014738.1 COGs: COG0612 Zn-dependent peptidase; InterPro IPR001431: IPR011765: IPR007863; KEGG: fba:FIC_00227 peptidase, M16 family; PFAM: peptidase M16 domain protein; SPTR: Peptidase, M16 family; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase m16 domain-containing protein 957550 10001617 Riean_0864 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m16 domain-containing protein YP_004045531.1 954626 D 693978 CDS YP_004045532.1 313206355 10001618 957658..958536 1 NC_014738.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: fba:FIC_00231 2,4-dienoyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 2,4-dienoyl-CoA reductase (NADPH); PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase sdr 958536 10001618 Riean_0865 Riemerella anatipestifer ATCC 11845 = DSM 15868 short-chain dehydrogenase/reductase sdr YP_004045532.1 957658 D 693978 CDS YP_004045533.1 313206356 10001619 958576..960318 1 NC_014738.1 COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610: IPR001667: IPR003156; KEGG: fba:FIC_02060 single-strandeD-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Single-stranded DNA-specific exonuclease; TIGRFAM: single-strandeD-DNA-specific exonuclease RecJ; PFAM: DHHA1 domain; DHH family; TIGRFAM: single-strandeD-DNA-specific exonuclease RecJ; exonuclease recj 960318 10001619 Riean_0866 Riemerella anatipestifer ATCC 11845 = DSM 15868 exonuclease recj YP_004045533.1 958576 D 693978 CDS YP_004045534.1 313206357 10001620 960328..960912 1 NC_014738.1 COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; InterPro IPR005248: IPR004821: IPR004820; KEGG: fba:FIC_02247 nicotinate-nucleotide adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase 960912 10001620 Riean_0867 Riemerella anatipestifer ATCC 11845 = DSM 15868 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_004045534.1 960328 D 693978 CDS YP_004045535.1 313206358 10001621 960935..961276 1 NC_014738.1 KEGG: fba:FIC_02246 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 961276 10001621 Riean_0868 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045535.1 960935 D 693978 CDS YP_004045536.1 313206359 10001623 complement(961519..961773) 1 NC_014738.1 InterPro IPR002583; KEGG: fba:FIC_02234 SSU ribosomal protein S20p; PFAM: ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein s20p 961773 10001623 Riean_0869 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein s20p YP_004045536.1 961519 R 693978 CDS YP_004045537.1 313206360 10001625 complement(961982..963274) 1 NC_014738.1 COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: fba:FIC_02236 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 963274 10001625 Riean_0870 Riemerella anatipestifer ATCC 11845 = DSM 15868 cell wall hydrolase/autolysin YP_004045537.1 961982 R 693978 CDS YP_004045538.1 313206361 10001626 963296..965905 1 NC_014738.1 COGs: COG1452 Organic solvent tolerance protein OstA; KEGG: fba:FIC_02237 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 965905 10001626 Riean_0871 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045538.1 963296 D 693978 CDS YP_004045539.1 313206362 10001627 965994..966374 1 NC_014738.1 COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056: IPR006175; KEGG: fba:FIC_02238 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; endoribonuclease l-psp 966374 10001627 Riean_0872 Riemerella anatipestifer ATCC 11845 = DSM 15868 endoribonuclease l-psp YP_004045539.1 965994 D 693978 CDS YP_004045540.1 313206363 10001628 966375..966818 1 NC_014738.1 KEGG: fba:FIC_02239 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 966818 10001628 Riean_0873 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045540.1 966375 D 693978 CDS YP_004045541.1 313206364 10001629 966926..968218 1 NC_014738.1 COGs: COG0148 Enolase; InterPro IPR000941: IPR020809: IPR020811: IPR020810; KEGG: fba:FIC_01992 phosphopyruvate hydratase; PFAM: Enolase-like; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; enolase 968218 10001629 Riean_0874 Riemerella anatipestifer ATCC 11845 = DSM 15868 enolase YP_004045541.1 966926 D 693978 CDS YP_004045542.1 313206365 10001630 968322..969608 1 NC_014738.1 COGs: COG0372 Citrate synthase; InterPro IPR002020: IPR019810: IPR010953; KEGG: fba:FIC_01991 citrate synthase (si); PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: Citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); citrate synthase i 969608 10001630 Riean_0875 Riemerella anatipestifer ATCC 11845 = DSM 15868 citrate synthase i YP_004045542.1 968322 D 693978 CDS YP_004045543.1 313206366 10001631 969784..970911 1 NC_014738.1 InterPro IPR000866: IPR017936; KEGG: pgn:PGN_0488 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: DNA topoisomerase IV subunit B; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen 970911 10001631 Riean_0876 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen YP_004045543.1 969784 D 693978 CDS YP_004045544.1 313206367 10001632 970955..971869 1 NC_014738.1 COGs: COG1834 N-Dimethylarginine dimethylaminohydrolase; InterPro IPR003198; KEGG: fba:FIC_02241 NG,NG-dimethylarginine dimethylaminohydrolase 1; PFAM: amidinotransferase; SPTR: N-dimethylarginine dimethylaminohydrolase; PFAM: Amidinotransferase; amidinotransferase 971869 10001632 Riean_0877 Riemerella anatipestifer ATCC 11845 = DSM 15868 amidinotransferase YP_004045544.1 970955 D 693978 CDS YP_004045545.1 313206368 10001633 complement(971965..972459) 1 NC_014738.1 COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: fba:FIC_01994 LSU ribosomal protein L17p; PFAM: ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein l17p 972459 10001633 Riean_0878 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l17p YP_004045545.1 971965 R 693978 CDS YP_004045546.1 313206369 10001634 complement(972468..973463) 1 NC_014738.1 COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterPro IPR011263: IPR011773: IPR011261: IPR011262: IPR 011260; KEGG: fba:FIC_01995 DNA-directed RNA polymerase alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; SMART: RNA polymerase RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha 973463 10001634 Riean_0879 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA-directed RNA polymerase subunit alpha YP_004045546.1 972468 R 693978 CDS YP_004045547.1 313206370 10001635 complement(973492..974100) 1 NC_014738.1 COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR002942: IPR005709: IPR001912; KEGG: fba:FIC_01996 30S ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 974100 10001635 Riean_0880 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S4 YP_004045547.1 973492 R 693978 CDS YP_004045548.1 313206371 10001636 complement(974120..974509) 1 NC_014738.1 COGs: COG0100 Ribosomal protein S11; InterPro IPR018102: IPR001971: IPR019981; KEGG: fba:FIC_01997 SSU ribosomal protein S11p (S14e); PFAM: ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 974509 10001636 Riean_0881 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S11 YP_004045548.1 974120 R 693978 CDS YP_004045549.1 313206372 10001637 complement(974521..974898) 1 NC_014738.1 COGs: COG0099 Ribosomal protein S13; InterPro IPR018269: IPR001892: IPR019980; KEGG: fba:FIC_01998 SSU ribosomal protein S13p (S18e); PFAM: ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 974898 10001637 Riean_0882 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S13 YP_004045549.1 974521 R 693978 CDS YP_004045550.1 313206373 10001638 complement(974916..975032) 1 NC_014738.1 InterPro IPR000473; KEGG: cat:CA2559_05830 ribosomal protein L36; PFAM: ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; manually curated; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein l36p 975032 10001638 Riean_0883 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l36p YP_004045550.1 974916 R 693978 CDS YP_004045551.1 313206374 10001639 complement(975077..975292) 1 NC_014738.1 COGs: COG0361 Translation initiation factor 1 (IF-1); InterPro IPR004368: IPR006196; KEGG: fba:FIC_02000 translation initiation factor 1; PFAM: S1 IF1 family protein; SPTR: Initiation factor IF1; TIGRFAM: translation initiation factor IF-1; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor 1 (bif-1) 975292 10001639 Riean_0884 Riemerella anatipestifer ATCC 11845 = DSM 15868 translation initiation factor 1 (bif-1) YP_004045551.1 975077 R 693978 CDS YP_004045552.1 313206375 10001640 complement(975305..976684) 1 NC_014738.1 COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: fba:FIC_02001 preprotein translocase SecY subunit; PFAM: SecY protein; SPTR: Preprotein translocase subunit secY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; protein translocase subunit SecY 976684 10001640 Riean_0885 Riemerella anatipestifer ATCC 11845 = DSM 15868 protein translocase subunit SecY YP_004045552.1 975305 R 693978 CDS YP_004045553.1 313206376 10001641 complement(976693..977142) 1 NC_014738.1 COGs: COG0200 Ribosomal protein L15; InterPro IPR001196: IPR005749; KEGG: fba:FIC_02002 LSU ribosomal protein L15p (L27Ae); SPTR: 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 977142 10001641 Riean_0886 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L15 YP_004045553.1 976693 R 693978 CDS YP_004045554.1 313206377 10001642 complement(977223..977399) 1 NC_014738.1 InterPro IPR018038: IPR005996: IPR000517; KEGG: fba:FIC_02003 LSU ribosomal protein L30p (L7e); PFAM: ribosomal protein L30; SPTR: 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; 50S ribosomal protein l30p 977399 10001642 Riean_0887 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l30p YP_004045554.1 977223 R 693978 CDS YP_004045555.1 313206378 10001643 complement(977410..977931) 1 NC_014738.1 COGs: COG0098 Ribosomal protein S5; InterPro IPR018192: IPR005712: IPR013810: IPR005324; KEGG: fba:FIC_02004 30S ribosomal protein S5; PFAM: Ribosomal protein S5; ribosomal protein S5 domain protein; SPTR: Ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 977931 10001643 Riean_0888 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S5 YP_004045555.1 977410 R 693978 CDS YP_004045556.1 313206379 10001644 complement(977945..978298) 1 NC_014738.1 COGs: COG0256 Ribosomal protein L18; InterPro IPR004389: IPR005484; KEGG: fba:FIC_02005 LSU ribosomal protein L18p (L5e); PFAM: ribosomal protein L18P/L5E; SPTR: 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 978298 10001644 Riean_0889 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L18 YP_004045556.1 977945 R 693978 CDS YP_004045557.1 313206380 10001645 complement(978310..978855) 1 NC_014738.1 COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR019906: IPR002358: IPR000702: IPR020040; KEGG: fba:FIC_02006 LSU ribosomal protein L6p (L9e); PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 978855 10001645 Riean_0890 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L6 YP_004045557.1 978310 R 693978 CDS YP_004045558.1 313206381 10001646 complement(978873..979271) 1 NC_014738.1 COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: fba:FIC_02007 SSU ribosomal protein S8p (S15Ae); PFAM: ribosomal protein S8; SPTR: Ribosomal protein S8; PFAM: Ribosomal protein S8; 30S ribosomal protein S8 979271 10001646 Riean_0891 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S8 YP_004045558.1 978873 R 693978 CDS YP_004045559.1 313206382 10001647 complement(979392..979661) 1 NC_014738.1 COGs: COG0199 Ribosomal protein S14; InterPro IPR018271: IPR001209; KEGG: fba:FIC_02008 SSU ribosomal protein S14p (S29e); PFAM: ribosomal protein S14; SPTR: Ribosomal protein S14; PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein s14p 979661 10001647 Riean_0892 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein s14p YP_004045559.1 979392 R 693978 CDS YP_004045560.1 313206383 10001648 complement(979667..980218) 1 NC_014738.1 COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: fba:FIC_02009 50S ribosomal protein L5; SPTR: 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 980218 10001648 Riean_0893 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L5 YP_004045560.1 979667 R 693978 CDS YP_004045561.1 313206384 10001649 complement(980228..980548) 1 NC_014738.1 COGs: COG0198 Ribosomal protein L24; InterPro IPR005824: IPR003256; KEGG: fba:FIC_02010 LSU ribosomal protein L24p (L26e); SMART: KOW domain protein; SPTR: 50S ribosomal protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein l24p 980548 10001649 Riean_0894 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l24p YP_004045561.1 980228 R 693978 CDS YP_004045562.1 313206385 10001650 complement(980568..980936) 1 NC_014738.1 COGs: COG0093 Ribosomal protein L14; InterPro IPR019972: IPR005745: IPR000218; KEGG: fba:FIC_02011 50S ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 980936 10001650 Riean_0895 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L14 YP_004045562.1 980568 R 693978 CDS YP_004045563.1 313206386 10001651 complement(980936..981190) 1 NC_014738.1 COGs: COG0186 Ribosomal protein S17; InterPro IPR000266: IPR019979: IPR019984; KEGG: fba:FIC_02012 SSU ribosomal protein S17p (S11e); PFAM: ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 981190 10001651 Riean_0896 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S17 YP_004045563.1 980936 R 693978 CDS YP_004045564.1 313206387 10001652 complement(981206..981391) 1 NC_014738.1 InterPro IPR018254: IPR001854; KEGG: fba:FIC_02013 ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein l29p 981391 10001652 Riean_0897 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l29p YP_004045564.1 981206 R 693978 CDS YP_004045565.1 313206388 10001653 complement(981403..981828) 1 NC_014738.1 COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR000114: IPR020798: IPR016180; KEGG: fba:FIC_02014 LSU ribosomal protein L16p (L10e); PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 981828 10001653 Riean_0898 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L16 YP_004045565.1 981403 R 693978 CDS YP_004045566.1 313206389 10001654 complement(981939..982634) 1 NC_014738.1 COGs: COG0092 Ribosomal protein S3; InterPro IPR004087: IPR018280: IPR005704: IPR008282: IPR 004044: IPR001351: IPR004088; KEGG: fba:FIC_02015 30S ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; SMART: KH domain protein; SPTR: Ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 982634 10001654 Riean_0899 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S3 YP_004045566.1 981939 R 693978 CDS YP_004045567.1 313206390 10001655 complement(982642..983046) 1 NC_014738.1 COGs: COG0091 Ribosomal protein L22; InterPro IPR005727: IPR001063; KEGG: fba:FIC_02016 LSU ribosomal protein L22p (L17e); PFAM: ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 983046 10001655 Riean_0900 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L22 YP_004045567.1 982642 R 693978 CDS YP_004045568.1 313206391 10001656 complement(983052..983330) 1 NC_014738.1 COGs: COG0185 Ribosomal protein S19; InterPro IPR002222: IPR020934: IPR005732; KEGG: fba:FIC_02017 30S ribosomal protein S19; PFAM: ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein s19p 983330 10001656 Riean_0901 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein s19p YP_004045568.1 983052 R 693978 CDS YP_004045569.1 313206392 10001657 complement(983333..984154) 1 NC_014738.1 COGs: COG0090 Ribosomal protein L2; InterPro IPR002171: IPR005880; KEGG: fba:FIC_02018 50S ribosomal protein L2; PFAM: ribosomal protein L2; SPTR: 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein l2p 984154 10001657 Riean_0902 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l2p YP_004045569.1 983333 R 693978 CDS YP_004045570.1 313206393 10001658 complement(984174..984464) 1 NC_014738.1 COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: fba:FIC_02019 LSU ribosomal protein L23p (L23Ae); PFAM: Ribosomal protein L25/L23; SPTR: LSU ribosomal protein L23p (L23Ae); PFAM: Ribosomal protein L23; 50S ribosomal protein l23p 984464 10001658 Riean_0903 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l23p YP_004045570.1 984174 R 693978 CDS YP_004045571.1 313206394 10001659 complement(984468..985097) 1 NC_014738.1 COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: fba:FIC_02020 LSU ribosomal protein L4p (L1e); PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family; 50S ribosomal protein l4p 985097 10001659 Riean_0904 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l4p YP_004045571.1 984468 R 693978 CDS YP_004045572.1 313206395 10001660 complement(985088..985711) 1 NC_014738.1 COGs: COG0087 Ribosomal protein L3; InterPro IPR019926: IPR019927: IPR000597; KEGG: fba:FIC_02021 LSU ribosomal protein L3p (L3e); PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3 985711 10001660 Riean_0905 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L3 YP_004045572.1 985088 R 693978 CDS YP_004045573.1 313206396 10001661 986014..986766 1 NC_014738.1 COGs: COG5495 conserved hypothetical protein; InterPro IPR018931; KEGG: fba:FIC_02543 NADP oxidoreductase coenzyme F420-dependent superfamily protein; PFAM: Domain of unknown function DUF2520; SPTR: NADP oxidoreductase coenzyme f420-dependent superfamily protein; PFAM: Domain of unknown function (DUF2520); NADP oxidoreductase coenzyme F420-dependent; hypothetical protein 986766 10001661 Riean_0906 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045573.1 986014 D 693978 CDS YP_004045574.1 313206397 10001662 986756..987274 1 NC_014738.1 COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023: IPR006549: IPR013200; KEGG: fba:FIC_02544 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: 3-deoxy-manno-octulosonate-8-phosphatase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, yrbi family 987274 10001662 Riean_0907 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, yrbi family YP_004045574.1 986756 D 693978 CDS YP_004045575.1 313206398 10001663 987292..987870 1 NC_014738.1 COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR003697; KEGG: fba:FIC_02545 septum formation protein Maf; PFAM: Maf family protein; SPTR: Maf-like protein FIC_02545; TIGRFAM: maf protein; PFAM: Maf-like protein; TIGRFAM: MAF protein; maf protein 987870 10001663 Riean_0908 Riemerella anatipestifer ATCC 11845 = DSM 15868 maf protein YP_004045575.1 987292 D 693978 CDS YP_004045576.1 313206399 10001664 987935..990400 1 NC_014738.1 InterPro IPR019734: IPR013026; KEGG: fba:FIC_00009 TPR domain protein; SPTR: TPR domain protein; gliding motility protein spre 990400 10001664 Riean_0909 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein spre YP_004045576.1 987935 D 693978 CDS YP_004045577.1 313206400 10001665 complement(990406..991080) 1 NC_014738.1 COGs: COG1214 Inactive homolog of metal-dependent protease molecular chaperone; InterPro IPR000905; KEGG: fba:FIC_00008 glycoprotease family exported protein; PFAM: peptidase M22 glycoprotease; SPTR: Possible M22 family non-peptidase; PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; peptidase m22 glycoprotease 991080 10001665 Riean_0910 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m22 glycoprotease YP_004045577.1 990406 R 693978 CDS YP_004045578.1 313206401 10001666 complement(991188..992345) 1 NC_014738.1 KEGG: coc:Coch_1607 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 992345 10001666 Riean_0911 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045578.1 991188 R 693978 CDS YP_004045579.1 313206402 10001667 complement(992357..993064) 1 NC_014738.1 COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR003593: IPR012202: IPR004392: IPR003495; KEGG: sli:Slin_3881 hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; TIGRFAM: hydrogenase accessory protein HypB; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB; hydrogenase accessory protein hypb 993064 10001667 Riean_0912 Riemerella anatipestifer ATCC 11845 = DSM 15868 hydrogenase accessory protein hypb YP_004045579.1 992357 R 693978 CDS YP_004045580.1 313206403 10001668 complement(993074..993412) 1 NC_014738.1 COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); InterPro IPR000688; KEGG: sli:Slin_3882 hydrogenase expression/synthesis HypA; PFAM: hydrogenase expression/synthesis HypA; SPTR: Putative uncharacterized protein; PFAM: Hydrogenase expression/synthesis hypA family; hydrogenase expression/synthesis hypa 993412 10001668 Riean_0913 Riemerella anatipestifer ATCC 11845 = DSM 15868 hydrogenase expression/synthesis hypa YP_004045580.1 993074 R 693978 CDS YP_004045581.1 313206404 10001669 complement(993405..994412) 1 NC_014738.1 COGs: COG0829 Urease accessory protein UreH; InterPro IPR002669; KEGG: cth:Cthe_1812 urease accessory protein UreD; PFAM: Urease accessory protein UreD; SPTR: Urease accessory protein ureD; PFAM: UreD urease accessory protein; urease accessory protein ured 994412 10001669 Riean_0914 Riemerella anatipestifer ATCC 11845 = DSM 15868 urease accessory protein ured YP_004045581.1 993405 R 693978 CDS YP_004045582.1 313206405 10001670 complement(994449..995060) 1 NC_014738.1 COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR004400: IPR012202: IPR003495; KEGG: cth:Cthe_1813 urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; SPTR: Urease accessory protein ureG; TIGRFAM: urease accessory protein UreG; PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG; hydrogenase accessory protein HypB; urease accessory protein ureg 995060 10001670 Riean_0915 Riemerella anatipestifer ATCC 11845 = DSM 15868 urease accessory protein ureg YP_004045582.1 994449 R 693978 CDS YP_004045583.1 313206406 10001671 complement(995079..995765) 1 NC_014738.1 COGs: COG0830 Urease accessory protein UreF; InterPro IPR002639; KEGG: cpi:Cpin_1476 urease accessory protein UreF; PFAM: Urease accessory protein UreF; SPTR: Urease accessory protein ureF; PFAM: UreF; urease accessory protein uref 995765 10001671 Riean_0916 Riemerella anatipestifer ATCC 11845 = DSM 15868 urease accessory protein uref YP_004045583.1 995079 R 693978 CDS YP_004045584.1 313206407 10001672 complement(995769..996272) 1 NC_014738.1 COGs: COG2371 Urease accessory protein UreE; InterPro IPR012406: IPR004029: IPR007864; KEGG: cpi:Cpin_1475 urease accessory protein UreE; PFAM: UreE urease accessory domain-containing protein; SPTR: Urease accessory protein ureE; PFAM: UreE urease accessory protein, C-terminal domain; UreE urease accessory protein, N-terminal domain; uree urease accessory domain-containing protein 996272 10001672 Riean_0917 Riemerella anatipestifer ATCC 11845 = DSM 15868 uree urease accessory domain-containing protein YP_004045584.1 995769 R 693978 CDS YP_004045585.1 313206408 10001673 complement(996291..998180) 1 NC_014738.1 COGs: COG0804 Urea amidohydrolase (urease) alpha subunit; InterPro IPR017952: IPR005848: IPR018486: IPR017950: IPR 006311: IPR011612: IPR006680: IPR017951; KEGG: fjo:Fjoh_4835 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain-containing protein; PRIAM: Urease; SPTR: Urease; TIGRFAM: urease, alpha subunit; PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit; urease subunit alpha 998180 10001673 Riean_0918 Riemerella anatipestifer ATCC 11845 = DSM 15868 urease subunit alpha YP_004045585.1 996291 R 693978 CDS YP_004045586.1 313206409 10001674 complement(998213..998602) 1 NC_014738.1 COGs: COG0832 Urea amidohydrolase (urease) beta subunit; InterPro IPR002019; KEGG: tal:Thal_0721 urease, beta subunit; PFAM: Urease beta subunit; PRIAM: Urease; SPTR: Urease subunit beta; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit; urease subunit beta 998602 10001674 Riean_0919 Riemerella anatipestifer ATCC 11845 = DSM 15868 urease subunit beta YP_004045586.1 998213 R 693978 CDS YP_004045587.1 313206410 10001675 complement(998602..998907) 1 NC_014738.1 COGs: COG0831 Urea amidohydrolase (urease) gamma subunit; InterPro IPR012010: IPR002026; KEGG: fjo:Fjoh_4837 urease subunit gamma; PFAM: Urease gamma subunit region; PRIAM: Urease; SPTR: Urease subunit gamma; TIGRFAM: urease, gamma subunit; PFAM: Urease, gamma subunit; TIGRFAM: urease, gamma subunit; urease subunit gamma 998907 10001675 Riean_0920 Riemerella anatipestifer ATCC 11845 = DSM 15868 urease subunit gamma YP_004045587.1 998602 R 693978 CDS YP_004045588.1 313206411 10001676 complement(999080..1001425) 1 NC_014738.1 COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR010105: IPR012910: IPR000531; KEGG: dfe:Dfer_0102 TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor; tonb-dependent siderophore receptor 1001425 10001676 Riean_0921 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent siderophore receptor YP_004045588.1 999080 R 693978 CDS YP_004045589.1 313206412 10001677 complement(1001459..1002232) 1 NC_014738.1 COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR017871: IPR003439: IPR003593; KEGG: acd:AOLE_09215 iron ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type cobalamin/Fe3+-siderophore transport system; PFAM: ABC transporter; ABC transporter 1002232 10001677 Riean_0922 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045589.1 1001459 R 693978 CDS YP_004045590.1 313206413 10001678 complement(1002223..1003233) 1 NC_014738.1 COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: aci:ACIAD0970 iron ABC transporter membrane protein; PFAM: transport system permease protein; SPTR: Putative iron transport protein (ABC superfamily, membrane); PFAM: FecCD transport family; transport system permease 1003233 10001678 Riean_0923 Riemerella anatipestifer ATCC 11845 = DSM 15868 transport system permease YP_004045590.1 1002223 R 693978 CDS YP_004045591.1 313206414 10001679 complement(1003235..1004302) 1 NC_014738.1 COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: aci:ACIAD0971 iron ABC transporter periplasmic substrate-binding protein; PFAM: periplasmic binding protein; SPTR: Putative iron transport protein (ABC superfamily, peri_bind); PFAM: Periplasmic binding protein; periplasmic binding protein 1004302 10001679 Riean_0924 Riemerella anatipestifer ATCC 11845 = DSM 15868 periplasmic binding protein YP_004045591.1 1003235 R 693978 CDS YP_004045592.1 313206415 10001680 complement(1004312..1004836) 1 NC_014738.1 KEGG: fba:FIC_02494 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1004836 10001680 Riean_0925 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045592.1 1004312 R 693978 CDS YP_004045593.1 313206416 10001681 complement(1004917..1005768) 1 NC_014738.1 COGs: COG0777 Acetyl-CoA carboxylase beta subunit; InterPro IPR000438: IPR000022: IPR011762; KEGG: fba:FIC_02495 acetyl-coenzyme A carboxyl transferase beta chain; PFAM: carboxyl transferase; SPTR: Acetyl-CoA carboxylase; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1005768 10001681 Riean_0926 Riemerella anatipestifer ATCC 11845 = DSM 15868 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_004045593.1 1004917 R 693978 CDS YP_004045594.1 313206417 10001682 complement(1005884..1006954) 1 NC_014738.1 COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771: IPR006411; KEGG: fba:FIC_02496 fructose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; SPTR: Fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; fructose-bisphosphate aldolase, class ii 1006954 10001682 Riean_0927 Riemerella anatipestifer ATCC 11845 = DSM 15868 fructose-bisphosphate aldolase, class ii YP_004045594.1 1005884 R 693978 CDS YP_004045595.1 313206418 10001683 complement(1007010..1007876) 1 NC_014738.1 COGs: COG0061 sugar kinase; InterPro IPR002504; KEGG: fba:FIC_02498 NAD kinase; PFAM: ATP-NAD/AcoX kinase; SPTR: NAD kinase; PFAM: ATP-NAD kinase; ATP-nad/acox kinase 1007876 10001683 Riean_0928 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-nad/acox kinase YP_004045595.1 1007010 R 693978 CDS YP_004045596.1 313206419 10001684 1008050..1010725 1 NC_014738.1 KEGG: fba:FIC_02535 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1010725 10001684 Riean_0929 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045596.1 1008050 D 693978 CDS YP_004045597.1 313206420 10001685 1010885..1011340 1 NC_014738.1 KEGG: fba:FIC_00038 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1011340 10001685 Riean_0930 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045597.1 1010885 D 693978 CDS YP_004045598.1 313206421 10001686 1011438..1012118 1 NC_014738.1 COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: fba:FIC_00039 MotA/TolQ/ExbB family biopolymer transport prote in; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB family biopolymer transport prote in; PFAM: MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1; outer membrane transport energization protein exbb 1012118 10001686 Riean_0931 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane transport energization protein exbb YP_004045598.1 1011438 D 693978 CDS YP_004045599.1 313206422 10001687 1012135..1012533 1 NC_014738.1 COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: fba:FIC_00040 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1; outer membrane transport energization protein exbd 1012533 10001687 Riean_0932 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane transport energization protein exbd YP_004045599.1 1012135 D 693978 CDS YP_004045600.1 313206423 10001688 1012538..1013398 1 NC_014738.1 KEGG: fba:FIC_00041 ferric siderophore transport system, periplasmic binding protein TonB; SPTR: Ferric siderophore transport system, periplasmic binding protein TonB; TC 2.C.1.1.1; outer membrane transport energization protein tonb 1013398 10001688 Riean_0933 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane transport energization protein tonb YP_004045600.1 1012538 D 693978 CDS YP_004045601.1 313206424 10001689 1013442..1014650 1 NC_014738.1 COGs: COG2081 flavoprotein; InterPro IPR013027: IPR004792; KEGG: fba:FIC_02440 hypothetical protein; PFAM: HI0933 family protein; SPTR: Flavoprotein; PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; hi0933 family protein 1014650 10001689 Riean_0934 Riemerella anatipestifer ATCC 11845 = DSM 15868 hi0933 family protein YP_004045601.1 1013442 D 693978 CDS YP_004045602.1 313206425 10001690 complement(1014713..1015507) 1 NC_014738.1 InterPro IPR002541; KEGG: coc:Coch_1103 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; PFAM: Cytochrome C assembly protein; cytochrome c assembly protein 1015507 10001690 Riean_0935 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytochrome c assembly protein YP_004045602.1 1014713 R 693978 CDS YP_004045603.1 313206426 10001691 complement(1015510..1016736) 1 NC_014738.1 KEGG: coc:Coch_1102 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: ResB-like family; hypothetical protein 1016736 10001691 Riean_0936 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045603.1 1015510 R 693978 CDS YP_004045604.1 313206427 10001692 complement(1016814..1018280) 1 NC_014738.1 COGs: COG3303 Formate-dependent nitrite reductase periplasmic cytochrome c552 subunit; InterPro IPR003321: IPR011031; KEGG: coc:Coch_1101 nitrite reductase (cytochrome; ammonia-forming); PFAM: cytochrome c552; PRIAM: Nitrite reductase (cytochrome; ammonia-forming); SPTR: Nitrite reductase (Cytochrome; ammonia-forming); PFAM: Cytochrome c552; respiratory nitrite reductase (cytochrome; ammonia-forming) 1018280 10001692 Riean_0937 Riemerella anatipestifer ATCC 11845 = DSM 15868 respiratory nitrite reductase (cytochrome; ammonia-forming) YP_004045604.1 1016814 R 693978 CDS YP_004045605.1 313206428 10001693 complement(1018302..1018904) 1 NC_014738.1 COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR017571: IPR005126: IPR011031; KEGG: coc:Coch_1100 cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c domain protein; SPTR: Cytochrome c nitrate reductase, small subunit; TIGRFAM: cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit; respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (nrfh) precursor 1018904 10001693 Riean_0938 Riemerella anatipestifer ATCC 11845 = DSM 15868 respiratory nitrite reductase specific menaquinol--cytochrome-c reductase (nrfh) precursor YP_004045605.1 1018302 R 693978 CDS YP_004045606.1 313206429 10001694 1019135..1020457 1 NC_014738.1 KEGG: coc:Coch_1099 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1020457 10001694 Riean_0939 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045606.1 1019135 D 693978 CDS YP_004045607.1 313206430 10001695 complement(1020541..1023174) 1 NC_014738.1 InterPro IPR000209: IPR003961: IPR007280; KEGG: sli:Slin_5991 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Fibronectin type III domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; peptidase domain protein; SMART: Fibronectin type III domain protein; SPTR: Putative surface protein; PFAM: Bacterial pre-peptidase C-terminal domain; Fibronectin type III domain; Subtilase family; fibronectin type III domain-containing protein 1023174 10001695 Riean_0940 Riemerella anatipestifer ATCC 11845 = DSM 15868 fibronectin type III domain-containing protein YP_004045607.1 1020541 R 693978 CDS YP_004045608.1 313206431 10001696 1023476..1025140 1 NC_014738.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR017871: IPR001140: IPR003439: IPR003593: IPR 017940; KEGG: fba:FIC_00206 ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: Possible xenobiotic-transporting ATPase; PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter 1025140 10001696 Riean_0941 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045608.1 1023476 D 693978 CDS YP_004045609.1 313206432 10001697 1025343..1025681 1 NC_014738.1 InterPro IPR006628; KEGG: fba:FIC_00205 hypothetical protein; SMART: PUR-alpha/beta/gamma DNA/RNA-binding; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3276); pur-alpha/beta/gamma DNA/RNA-binding protein 1025681 10001697 Riean_0942 Riemerella anatipestifer ATCC 11845 = DSM 15868 pur-alpha/beta/gamma DNA/RNA-binding protein YP_004045609.1 1025343 D 693978 CDS YP_004045610.1 313206433 10001699 complement(1025852..1026571) 1 NC_014738.1 COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: fba:FIC_00203 LmbE family protein; PFAM: LmbE family protein; SPTR: LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase; lmbe family protein 1026571 10001699 Riean_0943 Riemerella anatipestifer ATCC 11845 = DSM 15868 lmbe family protein YP_004045610.1 1025852 R 693978 CDS YP_004045611.1 313206434 10001700 complement(1026669..1028300) 1 NC_014738.1 InterPro IPR001440: IPR019734: IPR013026; KEGG: fba:FIC_00420 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; tetratricopeptide tpr_1 repeat-containing protein 1028300 10001700 Riean_0944 Riemerella anatipestifer ATCC 11845 = DSM 15868 tetratricopeptide tpr_1 repeat-containing protein YP_004045611.1 1026669 R 693978 CDS YP_004045612.1 313206435 10001701 complement(1028415..1029284) 1 NC_014738.1 KEGG: fba:FIC_00419 phosphate ABC transporter, phosphate-binding component; SPTR: Phosphate ABC transporter, phosphate-binding component; phosphate ABC transporter substrate-binding protein, phot family 1029284 10001701 Riean_0945 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphate ABC transporter substrate-binding protein, phot family YP_004045612.1 1028415 R 693978 CDS YP_004045613.1 313206436 10001702 complement(1029277..1029471) 1 NC_014738.1 KEGG: sli:Slin_5091 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1029471 10001702 Riean_0946 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045613.1 1029277 R 693978 CDS YP_004045614.1 313206437 10001703 complement(1029535..1030380) 1 NC_014738.1 KEGG: fba:FIC_00417 TonB family protein; SPTR: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; TC 2.C.1.1.1; outer membrane transport energization protein tonb 1030380 10001703 Riean_0947 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane transport energization protein tonb YP_004045614.1 1029535 R 693978 CDS YP_004045615.1 313206438 10001704 complement(1030409..1030957) 1 NC_014738.1 InterPro IPR003400; KEGG: fba:FIC_00416 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport ExbD protein; PFAM: Biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1; outer membrane transport energization protein exbd 1030957 10001704 Riean_0948 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane transport energization protein exbd YP_004045615.1 1030409 R 693978 CDS YP_004045616.1 313206439 10001705 complement(1030967..1031569) 1 NC_014738.1 InterPro IPR003400; KEGG: fba:FIC_00415 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; PFAM: Biopolymer transport protein ExbD/TolR; TC 2.C.1.1.1; outer membrane transport energization protein exbd 1031569 10001705 Riean_0949 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane transport energization protein exbd YP_004045616.1 1030967 R 693978 CDS YP_004045617.1 313206440 10001706 complement(1031672..1032538) 1 NC_014738.1 COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: fba:FIC_00414 MotA/TolQ/ExbB proton channel family protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family; TC 2.C.1.1.1; outer membrane transport energization protein exbb 1032538 10001706 Riean_0950 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane transport energization protein exbb YP_004045617.1 1031672 R 693978 CDS YP_004045618.1 313206441 10001707 complement(1032804..1035638) 1 NC_014738.1 COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002302: IPR001412: IPR015413: IPR002300: IPR 013155; KEGG: fba:FIC_00413 leucyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; SPTR: Leucine--tRNA ligase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; tRNA synthetases class I (M); TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 1035638 10001707 Riean_0951 Riemerella anatipestifer ATCC 11845 = DSM 15868 leucyl-tRNA synthetase YP_004045618.1 1032804 R 693978 CDS YP_004045619.1 313206442 10001708 1035829..1036581 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fba:FIC_00411 glycosyl transferase, family 2; PFAM: glycosyl transferase family 2; SPTR: Family 2 glycosyltransferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1036581 10001708 Riean_0952 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004045619.1 1035829 D 693978 CDS YP_004045620.1 313206443 10001709 1036776..1038305 1 NC_014738.1 COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001940: IPR011782: IPR001254: IPR001478; KEGG: fba:FIC_02240 serine protease, HtrA/DegQ/DegS family; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: S1C subfamily peptidase Do; TIGRFAM: protease Do; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; protease do 1038305 10001709 Riean_0953 Riemerella anatipestifer ATCC 11845 = DSM 15868 protease do YP_004045620.1 1036776 D 693978 CDS YP_004045621.1 313206444 10001710 1038446..1039690 1 NC_014738.1 COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: coc:Coch_2116 peptidase U32; PFAM: peptidase U32; SPTR: Peptidase U32; PFAM: Peptidase family U32; peptidase u32 1039690 10001710 Riean_0954 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase u32 YP_004045621.1 1038446 D 693978 CDS YP_004045622.1 313206445 10001711 1039706..1039936 1 NC_014738.1 InterPro IPR001080: IPR017896; KEGG: coc:Coch_2117 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4fe-4S ferredoxin iron-sulfur binding domain-containing protein 1039936 10001711 Riean_0955 Riemerella anatipestifer ATCC 11845 = DSM 15868 4fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004045622.1 1039706 D 693978 CDS YP_004045623.1 313206446 10001712 1039940..1040500 1 NC_014738.1 COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: fba:FIC_02041 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5-formyltetrahydrofolate cyclo-ligase 1040500 10001712 Riean_0956 Riemerella anatipestifer ATCC 11845 = DSM 15868 5-formyltetrahydrofolate cyclo-ligase YP_004045623.1 1039940 D 693978 CDS YP_004045624.1 313206447 10001713 complement(1040464..1041036) 1 NC_014738.1 KEGG: aag:AaeL_AAEL004680 nuclear lamin L1 alpha, putative; SPTR: Putative uncharacterized protein; hypothetical protein 1041036 10001713 Riean_0957 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045624.1 1040464 R 693978 CDS YP_004045625.1 313206448 10001714 complement(1041043..1042191) 1 NC_014738.1 KEGG: fba:FIC_02040 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1042191 10001714 Riean_0958 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045625.1 1041043 R 693978 CDS YP_004045626.1 313206449 10001715 1042374..1042664 1 NC_014738.1 KEGG: fba:FIC_02038 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1042664 10001715 Riean_0959 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045626.1 1042374 D 693978 CDS YP_004045627.1 313206450 10001716 complement(1042808..1044076) 1 NC_014738.1 COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR018156: IPR002317: IPR015866: IPR002314: IPR 006195; KEGG: fba:FIC_00139 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 1044076 10001716 Riean_0960 Riemerella anatipestifer ATCC 11845 = DSM 15868 seryl-tRNA synthetase YP_004045627.1 1042808 R 693978 CDS YP_004045628.1 313206451 10001717 complement(1044125..1044703) 1 NC_014738.1 KEGG: fba:FIC_00138 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1044703 10001717 Riean_0961 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045628.1 1044125 R 693978 CDS YP_004045629.1 313206452 10001718 1044712..1045986 1 NC_014738.1 COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR012795: IPR012796: IPR011063; KEGG: fba:FIC_00404 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; SPTR: tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(ile)-lysidine synthetase 1045986 10001718 Riean_0962 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA(ile)-lysidine synthetase YP_004045629.1 1044712 D 693978 CDS YP_004045630.1 313206453 10001719 1045996..1048068 1 NC_014738.1 COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR017936; KEGG: fba:FIC_00403 cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase; PRIAM: Protein-disulfide reductase; SPTR: Thiol:disulfide interchange protein DsbD; PFAM: Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255; protein-disulfide reductase 1048068 10001719 Riean_0963 Riemerella anatipestifer ATCC 11845 = DSM 15868 protein-disulfide reductase YP_004045630.1 1045996 D 693978 CDS YP_004045631.1 313206454 10001720 1048300..1049058 1 NC_014738.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: fba:FIC_02135 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; alpha/beta fold family hydrolase 1049058 10001720 Riean_0964 Riemerella anatipestifer ATCC 11845 = DSM 15868 alpha/beta fold family hydrolase YP_004045631.1 1048300 D 693978 CDS YP_004045632.1 313206455 10001721 1049237..1050244 1 NC_014738.1 KEGG: cpi:Cpin_3187 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1050244 10001721 Riean_0965 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045632.1 1049237 D 693978 CDS YP_004045633.1 313206456 10001722 1050247..1050708 1 NC_014738.1 KEGG: fba:FIC_00986 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1050708 10001722 Riean_0966 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045633.1 1050247 D 693978 CDS YP_004045634.1 313206457 10001723 1050734..1057705 1 NC_014738.1 InterPro IPR006530; KEGG: zpr:ZPR_3000 protein containing rhs repeat; PFAM: YD repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: YD repeat protein; PFAM: Salmonella virulence plasmid 65kDa B protein; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); yd repeat protein 1057705 10001723 Riean_0967 Riemerella anatipestifer ATCC 11845 = DSM 15868 yd repeat protein YP_004045634.1 1050734 D 693978 CDS YP_004045635.1 313206458 10001724 1057777..1058208 1 NC_014738.1 KEGG: pcb:PC000287.00.0 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1058208 10001724 Riean_0968 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045635.1 1057777 D 693978 CDS YP_004045636.1 313206459 10001725 1058215..1058496 1 NC_014738.1 KEGG: coc:Coch_0160 YD repeat protein; SPTR: YD repeat protein; hypothetical protein 1058496 10001725 Riean_0969 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045636.1 1058215 D 693978 CDS YP_004045637.1 313206460 10001726 1058490..1059032 1 NC_014738.1 KEGG: chu:CHU_1430 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1059032 10001726 Riean_0970 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045637.1 1058490 D 693978 CDS YP_004045638.1 313206461 10001727 1059100..1059585 1 NC_014738.1 InterPro IPR000096; KEGG: sdn:Sden_2438 serum amyloid A protein; PFAM: Serum amyloid A protein; SMART: Serum amyloid A protein; SPTR: Serum amyloid A protein; PFAM: Serum amyloid A protein; serum amyloid a protein 1059585 10001727 Riean_0971 Riemerella anatipestifer ATCC 11845 = DSM 15868 serum amyloid a protein YP_004045638.1 1059100 D 693978 CDS YP_004045639.1 313206462 10001728 1059589..1059948 1 NC_014738.1 KEGG: lba:Lebu_1962 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1059948 10001728 Riean_0972 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045639.1 1059589 D 693978 CDS YP_004045640.1 313206463 10001729 1059966..1060223 1 NC_014738.1 KEGG: bth:BT_3793 hypothetical protein; SPTR: Stylish 1-2; hypothetical protein 1060223 10001729 Riean_0973 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045640.1 1059966 D 693978 CDS YP_004045641.1 313206464 10001730 1060312..1060473 1 NC_014738.1 hypothetical protein 1060473 10001730 Riean_0974 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045641.1 1060312 D 693978 CDS YP_004045642.1 313206465 10001731 1060481..1060807 1 NC_014738.1 KEGG: srm:SRM_01616 transcription elongation factor GreA; SPTR: Transcription elongation factor; hypothetical protein 1060807 10001731 Riean_0975 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045642.1 1060481 D 693978 CDS YP_004045643.1 313206466 10001732 1060943..1061455 1 NC_014738.1 KEGG: tet:TepyoMp41 ymf62; SPTR: Putative uncharacterized protein; hypothetical protein 1061455 10001732 Riean_0976 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045643.1 1060943 D 693978 CDS YP_004045644.1 313206467 10001733 1061572..1062855 1 NC_014738.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160: IPR015590; KEGG: fba:FIC_02073 succinate-semialdehyde dehydrogenase (NAD); PFAM: Aldehyde Dehydrogenase; SPTR: Succinate-semialdehyde dehydrogenase (NAD); PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase 1062855 10001733 Riean_0977 Riemerella anatipestifer ATCC 11845 = DSM 15868 aldehyde dehydrogenase YP_004045644.1 1061572 D 693978 CDS YP_004045645.1 313206468 10001734 complement(1062934..1064379) 1 NC_014738.1 COGs: COG0469 Pyruvate kinase; InterPro IPR015793: IPR001697: IPR015794; KEGG: fba:FIC_02294 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 1064379 10001734 Riean_0978 Riemerella anatipestifer ATCC 11845 = DSM 15868 pyruvate kinase YP_004045645.1 1062934 R 693978 CDS YP_004045646.1 313206469 10001735 complement(1064372..1064842) 1 NC_014738.1 KEGG: fba:FIC_02293 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1064842 10001735 Riean_0979 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045646.1 1064372 R 693978 CDS YP_004045647.1 313206470 10001736 complement(1064829..1065572) 1 NC_014738.1 COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR011907: IPR000999: IPR001159; KEGG: fba:FIC_02292 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; PRIAM: Ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; SPTR: Possible ribonuclease III; TIGRFAM: ribonuclease III; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; rnase iii 1065572 10001736 Riean_0980 Riemerella anatipestifer ATCC 11845 = DSM 15868 rnase iii YP_004045647.1 1064829 R 693978 CDS YP_004045648.1 313206471 10001737 complement(1065576..1066820) 1 NC_014738.1 COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017568: IPR018201: IPR014030: IPR014031; KEGG: fba:FIC_02291 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase; SPTR: Beta-ketoacyl-acyl-carrier-protein synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase ii 1066820 10001737 Riean_0981 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-oxoacyl-(acyl-carrier-protein) synthase ii YP_004045648.1 1065576 R 693978 CDS YP_004045649.1 313206472 10001738 complement(1066849..1067088) 1 NC_014738.1 COGs: COG0236 Acyl carrier protein; InterPro IPR003231: IPR006162: IPR006163: IPR009081; KEGG: fba:FIC_02290 acyl carrier protein; PFAM: phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 1067088 10001738 Riean_0982 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyl carrier protein YP_004045649.1 1066849 R 693978 CDS YP_004045650.1 313206473 10001739 complement(1067244..1067759) 1 NC_014738.1 KEGG: phe:Phep_0972 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1067759 10001739 Riean_0983 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045650.1 1067244 R 693978 CDS YP_004045651.1 313206474 10001740 complement(1067924..1069180) 1 NC_014738.1 InterPro IPR002797; KEGG: bfr:BF1439 oligosaccharide repeat-containing polymerase; PFAM: polysaccharide biosynthesis protein; SPTR: Oligosaccharide repeat-containing polymerase; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1069180 10001740 Riean_0984 Riemerella anatipestifer ATCC 11845 = DSM 15868 polysaccharide biosynthesis protein YP_004045651.1 1067924 R 693978 CDS YP_004045652.1 313206475 10001741 1069222..1069719 1 NC_014738.1 KEGG: hiq:CGSHiGG_01500 7-cyano-7-deazaguanine reductase; SPTR: NADPH-dependent 7-cyano-7-deazaguanine reductase; hypothetical protein 1069719 10001741 Riean_0985 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045652.1 1069222 D 693978 CDS YP_004045653.1 313206476 10001742 1069688..1070578 1 NC_014738.1 KEGG: edi:EDI_195220 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1070578 10001742 Riean_0986 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045653.1 1069688 D 693978 CDS YP_004045654.1 313206477 10001743 complement(1070541..1071035) 1 NC_014738.1 KEGG: fba:FIC_00135 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1071035 10001743 Riean_0987 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045654.1 1070541 R 693978 CDS YP_004045655.1 313206478 10001744 complement(1071061..1071846) 1 NC_014738.1 COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: fba:FIC_00133 iron-sulphur-binding reductase; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Fe-S oxidoreductase, dehydrogenase subunit; manually curated; PFAM: Cysteine-rich domain; hypothetical protein 1071846 10001744 Riean_0988 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045655.1 1071061 R 693978 CDS YP_004045656.1 313206479 10001745 complement(1071901..1073238) 1 NC_014738.1 COGs: COG0247 Fe-S oxidoreductase; InterPro IPR017900: IPR000215: IPR017896; KEGG: fba:FIC_00132 transmembrane [4Fe-4S] cluster-binding oxidoredu ctase; SPTR: Iron-sulphur-binding oxidoreductase (Ferredoxin); transmembrane (4fe-4S) cluster-binding oxidoreductase 1073238 10001745 Riean_0989 Riemerella anatipestifer ATCC 11845 = DSM 15868 transmembrane (4fe-4S) cluster-binding oxidoreductase YP_004045656.1 1071901 R 693978 CDS YP_004045657.1 313206480 10001746 complement(1073257..1074195) 1 NC_014738.1 COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: fba:FIC_00131 Mce4 protein; PFAM: Mammalian cell entry related domain protein; SPTR: Mce4 protein; PFAM: mce related protein; mammalian cell entry related domain-containing protein 1074195 10001746 Riean_0990 Riemerella anatipestifer ATCC 11845 = DSM 15868 mammalian cell entry related domain-containing protein YP_004045657.1 1073257 R 693978 CDS YP_004045658.1 313206481 10001747 complement(1074300..1076426) 1 NC_014738.1 InterPro IPR000297; KEGG: fba:FIC_00130 peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; ppic-type peptidyl-prolyl cis-trans isomerase 1076426 10001747 Riean_0991 Riemerella anatipestifer ATCC 11845 = DSM 15868 ppic-type peptidyl-prolyl cis-trans isomerase YP_004045658.1 1074300 R 693978 CDS YP_004045659.1 313206482 10001748 1076574..1076915 1 NC_014738.1 COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR001538; KEGG: fba:FIC_02146 mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; SPTR: Mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase; mannose-6-phosphate isomerase 1076915 10001748 Riean_0992 Riemerella anatipestifer ATCC 11845 = DSM 15868 mannose-6-phosphate isomerase YP_004045659.1 1076574 D 693978 CDS YP_004045660.1 313206483 10001749 1076928..1077866 1 NC_014738.1 InterPro IPR006598; KEGG: bth:BT_3363 lipopolysaccharide core biosynthesis protein LpsA; SMART: lipopolysaccharide-modifying protein; SPTR: Lipopolysaccharide biosynthesis protein; PFAM: Arabidopsis thaliana protein of unknown function (DUF821); lipopolysaccharide-modifying protein 1077866 10001749 Riean_0993 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipopolysaccharide-modifying protein YP_004045660.1 1076928 D 693978 CDS YP_004045661.1 313206484 10001750 complement(1077867..1078901) 1 NC_014738.1 InterPro IPR001296; KEGG: coc:Coch_0964 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 1078901 10001750 Riean_0994 Riemerella anatipestifer ATCC 11845 = DSM 15868 group 1 glycosyl transferase YP_004045661.1 1077867 R 693978 CDS YP_004045662.1 313206485 10001751 complement(1078904..1079866) 1 NC_014738.1 KEGG: coc:Coch_0965 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1079866 10001751 Riean_0995 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045662.1 1078904 R 693978 CDS YP_004045663.1 313206486 10001752 complement(1079870..1080862) 1 NC_014738.1 KEGG: coc:Coch_0966 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1080862 10001752 Riean_0996 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045663.1 1079870 R 693978 CDS YP_004045664.1 313206487 10001753 complement(1080855..1081670) 1 NC_014738.1 KEGG: coc:Coch_0967 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1081670 10001753 Riean_0997 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045664.1 1080855 R 693978 CDS YP_004045665.1 313206488 10001754 complement(1081671..1082924) 1 NC_014738.1 COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR010164: IPR005814; KEGG: fba:FIC_02150 ornithine aminotransferase; PFAM: aminotransferase class-III; PRIAM: Ornithine aminotransferase; SPTR: Ornithine--oxo-acid transaminase; TIGRFAM: ornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase; ornithine aminotransferase 1082924 10001754 Riean_0998 Riemerella anatipestifer ATCC 11845 = DSM 15868 ornithine aminotransferase YP_004045665.1 1081671 R 693978 CDS YP_004045666.1 313206489 10001755 complement(1083047..1084402) 1 NC_014738.1 COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR004549: IPR005479: IPR005481: IPR005482: IPR 011761: IPR011764; KEGG: fba:FIC_02152 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: Acetyl-CoA carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; acetyl-CoA carboxylase, biotin carboxylase 1084402 10001755 Riean_0999 Riemerella anatipestifer ATCC 11845 = DSM 15868 acetyl-CoA carboxylase, biotin carboxylase YP_004045666.1 1083047 R 693978 CDS YP_004045667.1 313206490 10001756 complement(1084488..1084979) 1 NC_014738.1 COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249: IPR000089; KEGG: fba:FIC_02153 biotin carboxyl carrier protein of acetyl-CoA carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Biotin carboxyl carrier subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1084979 10001756 Riean_1000 Riemerella anatipestifer ATCC 11845 = DSM 15868 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004045667.1 1084488 R 693978 CDS YP_004045668.1 313206491 10001757 complement(1085074..1085277) 1 NC_014738.1 InterPro IPR002677; KEGG: fba:FIC_02154 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein l32p 1085277 10001757 Riean_1001 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l32p YP_004045668.1 1085074 R 693978 CDS YP_004045669.1 313206492 10001758 complement(1085323..1085877) 1 NC_014738.1 InterPro IPR003772; KEGG: fba:FIC_02155 hypothetical protein; PFAM: protein of unknown function DUF177; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1399; hypothetical protein 1085877 10001758 Riean_1002 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045669.1 1085323 R 693978 CDS YP_004045670.1 313206493 10001759 complement(1085952..1087037) 1 NC_014738.1 COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: fba:FIC_02156 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase 1087037 10001759 Riean_1003 Riemerella anatipestifer ATCC 11845 = DSM 15868 4-hydroxythreonine-4-phosphate dehydrogenase YP_004045670.1 1085952 R 693978 CDS YP_004045671.1 313206494 10001760 1087087..1087668 1 NC_014738.1 COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: fba:FIC_02157 riboflavin synthase alpha chain; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha 1087668 10001760 Riean_1004 Riemerella anatipestifer ATCC 11845 = DSM 15868 riboflavin synthase subunit alpha YP_004045671.1 1087087 D 693978 CDS YP_004045672.1 313206495 10001761 1087669..1089123 1 NC_014738.1 COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR004358: IPR003660: IPR003661: IPR003594: IPR 005467; KEGG: fba:FIC_02158 nitrogen regulation protein NtrY; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Nitrogen regulation protein ntrY; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 1089123 10001761 Riean_1005 Riemerella anatipestifer ATCC 11845 = DSM 15868 integral membrane sensor signal transduction histidine kinase YP_004045672.1 1087669 D 693978 CDS YP_004045673.1 313206496 10001762 1089128..1089835 1 NC_014738.1 COGs: COG4123 O-methyltransferase; InterPro IPR002296: IPR002052: IPR013217; KEGG: fba:FIC_02159 methyltransferase; PFAM: Methyltransferase type 12; SPTR: Methyltransferase; PFAM: Methyltransferase small domain; type 12 methyltransferase 1089835 10001762 Riean_1006 Riemerella anatipestifer ATCC 11845 = DSM 15868 type 12 methyltransferase YP_004045673.1 1089128 D 693978 CDS YP_004045674.1 313206497 10001763 complement(1089843..1090553) 1 NC_014738.1 COGs: COG2884 ATPase involved in cell division; InterPro IPR017871: IPR003439: IPR003593; KEGG: fba:FIC_02143 cell division transporter, ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Cell division transporter, ATP-binding protein ftsE; PFAM: ABC transporter; ABC transporter 1090553 10001763 Riean_1007 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045674.1 1089843 R 693978 CDS YP_004045675.1 313206498 10001764 complement(1090725..1090880) 1 NC_014738.1 InterPro IPR000271: IPR020939; KEGG: fba:FIC_02142 LSU ribosomal protein L34p; PFAM: ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein l34p 1090880 10001764 Riean_1008 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l34p YP_004045675.1 1090725 R 693978 CDS YP_004045676.1 313206499 10001765 1091052..1092056 1 NC_014738.1 COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667: IPR003156; KEGG: fba:FIC_02137 hypothetical protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Putative uncharacterized protein; tmRNA as predicted by Rfam (RF00023), score 168.14; PFAM: DHH family; DHHA1 domain; phosphoesterase recj domain-containing protein 1092056 10001765 Riean_R0027 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoesterase recj domain-containing protein YP_004045676.1 1091052 D 693978 CDS YP_004045677.1 313206500 10001766 1092695..1093432 1 NC_014738.1 KEGG: fba:FIC_02305 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1093432 10001766 Riean_1010 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045677.1 1092695 D 693978 CDS YP_004045678.1 313206501 10001767 1093692..1095911 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR000531; KEGG: fba:FIC_02244 TonB-dependent receptor; PFAM: TonB-dependent receptor; SPTR: Putative uncharacterized protein; tonb-dependent receptor 1095911 10001767 Riean_1011 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004045678.1 1093692 D 693978 CDS YP_004045679.1 313206502 10001768 1096069..1098948 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: dfe:Dfer_1098 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; tonb-dependent receptor plug 1098948 10001768 Riean_1012 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004045679.1 1096069 D 693978 CDS YP_004045680.1 313206503 10001769 1098961..1100367 1 NC_014738.1 KEGG: cpi:Cpin_0968 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1100367 10001769 Riean_1013 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045680.1 1098961 D 693978 CDS YP_004045681.1 313206504 10001770 1100396..1101415 1 NC_014738.1 COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; KEGG: pha:PSHAa1860 alkaline phosphatase D; SPTR: Putative alkaline phosphatase D (APaseD); PFAM: PhoD-like phosphatase; alkaline phosphatase d 1101415 10001770 Riean_1014 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkaline phosphatase d YP_004045681.1 1100396 D 693978 CDS YP_004045682.1 313206505 10001771 complement(1101477..1104632) 1 NC_014738.1 COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036: IPR001917: IPR000731; KEGG: fba:FIC_01318 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; acriflavin resistance protein 1104632 10001771 Riean_1015 Riemerella anatipestifer ATCC 11845 = DSM 15868 acriflavin resistance protein YP_004045682.1 1101477 R 693978 CDS YP_004045683.1 313206506 10001772 complement(1104704..1105759) 1 NC_014738.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143: IPR000089; KEGG: fba:FIC_01317 probable Co/Zn/Cd efflux system membrane fusion protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Probable Co/Zn/Cd efflux system membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; efflux transporter, rnd family, mfp subunit 1105759 10001772 Riean_1016 Riemerella anatipestifer ATCC 11845 = DSM 15868 efflux transporter, rnd family, mfp subunit YP_004045683.1 1104704 R 693978 CDS YP_004045684.1 313206507 10001773 complement(1105766..1107112) 1 NC_014738.1 COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fba:FIC_01316 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane efflux protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein 1107112 10001773 Riean_1017 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane efflux protein YP_004045684.1 1105766 R 693978 CDS YP_004045685.1 313206508 10001774 complement(1107102..1107716) 1 NC_014738.1 InterPro IPR001647; KEGG: fba:FIC_01315 transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family; regulatory protein tetr 1107716 10001774 Riean_1018 Riemerella anatipestifer ATCC 11845 = DSM 15868 regulatory protein tetr YP_004045685.1 1107102 R 693978 CDS YP_004045686.1 313206509 10001775 1107847..1108767 1 NC_014738.1 COGs: COG4874 Uncharacterized protein containing a pentein-type domain; InterPro IPR014541; KEGG: fba:FIC_02243 hypothetical protein; SPTR: Amidinotransferase; hypothetical protein 1108767 10001775 Riean_1019 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045686.1 1107847 D 693978 CDS YP_004045687.1 313206510 10001776 complement(1108830..1109387) 1 NC_014738.1 KEGG: fba:FIC_00084 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1109387 10001776 Riean_1020 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045687.1 1108830 R 693978 CDS YP_004045688.1 313206511 10001777 complement(1109396..1110598) 1 NC_014738.1 COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR002986: IPR000183; KEGG: fba:FIC_00085 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 1110598 10001777 Riean_1021 Riemerella anatipestifer ATCC 11845 = DSM 15868 diaminopimelate decarboxylase YP_004045688.1 1109396 R 693978 CDS YP_004045689.1 313206512 10001778 complement(1110634..1111539) 1 NC_014738.1 KEGG: fba:FIC_00066 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1111539 10001778 Riean_1022 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045689.1 1110634 R 693978 CDS YP_004045690.1 313206513 10001779 complement(1111594..1112007) 1 NC_014738.1 COGs: COG1660 P-loop-containing kinase; InterPro IPR005337; KEGG: fba:FIC_02372 ATP-binding protein (contains P-loop); SPTR: Putative uncharacterized protein; PFAM: P-loop ATPase protein family; ATP-binding protein (contains p-loop) 1112007 10001779 Riean_1023 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-binding protein (contains p-loop) YP_004045690.1 1111594 R 693978 CDS YP_004045691.1 313206514 10001780 complement(1112007..1113095) 1 NC_014738.1 COGs: COG0216 Protein chain release factor A; InterPro IPR004373: IPR000352: IPR005139; KEGG: fba:FIC_00058 peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: Peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 1113095 10001780 Riean_1024 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptide chain release factor 1 YP_004045691.1 1112007 R 693978 CDS YP_004045692.1 313206515 10001781 1113217..1113639 1 NC_014738.1 COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: fba:FIC_02054 OsmC/Ohr family protein; PFAM: OsmC family protein; SPTR: OsmC family protein; PFAM: OsmC-like protein; osmc family protein 1113639 10001781 Riean_1025 Riemerella anatipestifer ATCC 11845 = DSM 15868 osmc family protein YP_004045692.1 1113217 D 693978 CDS YP_004045693.1 313206516 10001782 complement(1113689..1114429) 1 NC_014738.1 COGs: COG0217 conserved hypothetical protein; InterPro IPR002876; KEGG: fba:FIC_02056 hypothetical protein; PFAM: protein of unknown function DUF28; SPTR: P25; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; hypothetical protein 1114429 10001782 Riean_1026 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045693.1 1113689 R 693978 CDS YP_004045694.1 313206517 10001783 complement(1114537..1116003) 1 NC_014738.1 COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006664: IPR018247: IPR003367: IPR006665; KEGG: fba:FIC_02057 OmpA; PFAM: OmpA/MotB domain protein; Thrombospondin type 3 repeat-containing protein; SPTR: OmpA; PFAM: OmpA family; Thrombospondin type 3 repeat; ompa/motb domain-containing protein 1116003 10001783 Riean_1027 Riemerella anatipestifer ATCC 11845 = DSM 15868 ompa/motb domain-containing protein YP_004045694.1 1114537 R 693978 CDS YP_004045695.1 313206518 10001784 complement(1116080..1116538) 1 NC_014738.1 COGs: COG0691 tmRNA-binding protein; InterPro IPR000037: IPR020081; KEGG: fba:FIC_02058 tmRNA-binding protein SmpB; PFAM: SmpB protein; SPTR: SsrA-binding protein SmpB; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; ssra-binding protein 1116538 10001784 Riean_1028 Riemerella anatipestifer ATCC 11845 = DSM 15868 ssra-binding protein YP_004045695.1 1116080 R 693978 CDS YP_004045696.1 313206519 10001785 1116635..1118257 1 NC_014738.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439: IPR003593; KEGG: fba:FIC_02059 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter; ABC transporter 1118257 10001785 Riean_1029 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045696.1 1116635 D 693978 CDS YP_004045697.1 313206520 10001786 1118343..1118873 1 NC_014738.1 COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fba:FIC_02389 RNA methylase, SpoU family; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: SpoU rRNA methylase family protein; PFAM: SpoU rRNA Methylase family; tRNA/rRNA methyltransferase (spou) 1118873 10001786 Riean_1030 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA/rRNA methyltransferase (spou) YP_004045697.1 1118343 D 693978 CDS YP_004045698.1 313206521 10001787 1118914..1120719 1 NC_014738.1 COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: fba:FIC_00037 protein containing DUF885; PFAM: protein of unknown function DUF885; SPTR: Bifunctional GMP synthase/glutamine amidotransferase protein; PFAM: Bacterial protein of unknown function (DUF885); hypothetical protein 1120719 10001787 Riean_1031 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045698.1 1118914 D 693978 CDS YP_004045699.1 313206522 10001788 1120832..1125808 1 NC_014738.1 COGs: COG2911 conserved hypothetical protein; InterPro IPR007844: IPR007452; KEGG: fba:FIC_02064 hypothetical protein; PFAM: AsmA family protein; protein of unknown function DUF490; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF490); asma family protein 1125808 10001788 Riean_1032 Riemerella anatipestifer ATCC 11845 = DSM 15868 asma family protein YP_004045699.1 1120832 D 693978 CDS YP_004045700.1 313206523 10001789 1125826..1128147 1 NC_014738.1 COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: fba:FIC_02065 surface antigen (D15); PFAM: surface antigen (D15); SPTR: Outer membrane protein; PFAM: Surface antigen; surface antigen (d15) 1128147 10001789 Riean_1033 Riemerella anatipestifer ATCC 11845 = DSM 15868 surface antigen (d15) YP_004045700.1 1125826 D 693978 CDS YP_004045701.1 313206524 10001790 1128161..1129069 1 NC_014738.1 COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: fba:FIC_02066 ribonuclease BN; PFAM: ribonuclease BN; SPTR: Ribonuclease BN-like family protein; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease bn 1129069 10001790 Riean_1034 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribonuclease bn YP_004045701.1 1128161 D 693978 CDS YP_004045702.1 313206525 10001791 1129085..1129894 1 NC_014738.1 COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002347: IPR002198: IPR020904; KEGG: gfo:GFO_0966 short-chain dehydrogenase/reductase family protein; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Putative short chain dehydrogenase; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase sdr 1129894 10001791 Riean_1035 Riemerella anatipestifer ATCC 11845 = DSM 15868 short-chain dehydrogenase/reductase sdr YP_004045702.1 1129085 D 693978 CDS YP_004045703.1 313206526 10001792 1129903..1131276 1 NC_014738.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR012394: IPR016160: IPR015590; KEGG: dhd:Dhaf_2181 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: NAD-dependent aldehyde dehydrogenases; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase 1131276 10001792 Riean_1036 Riemerella anatipestifer ATCC 11845 = DSM 15868 aldehyde dehydrogenase YP_004045703.1 1129903 D 693978 CDS YP_004045704.1 313206527 10001793 complement(1131357..1133162) 1 NC_014738.1 COGs: COG0206 Cell division GTPase; InterPro IPR000158: IPR020805: IPR003008: IPR018316; KEGG: fba:FIC_02461 cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein ftsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein ftsz 1133162 10001793 Riean_1037 Riemerella anatipestifer ATCC 11845 = DSM 15868 cell division protein ftsz YP_004045704.1 1131357 R 693978 CDS YP_004045705.1 313206528 10001794 complement(1133193..1134560) 1 NC_014738.1 COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR020823: IPR003494; KEGG: fba:FIC_02462 cell division protein FtsA; PFAM: cell division protein FtsA; SPTR: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; cell division protein ftsa 1134560 10001794 Riean_1038 Riemerella anatipestifer ATCC 11845 = DSM 15868 cell division protein ftsa YP_004045705.1 1133193 R 693978 CDS YP_004045706.1 313206529 10001795 complement(1134583..1135344) 1 NC_014738.1 KEGG: fba:FIC_02463 cell division protein FtsQ; SPTR: Cell division protein FtsQ; manually curated; cell division protein ftsq 1135344 10001795 Riean_1039 Riemerella anatipestifer ATCC 11845 = DSM 15868 cell division protein ftsq YP_004045706.1 1134583 R 693978 CDS YP_004045707.1 313206530 10001796 complement(1135354..1136712) 1 NC_014738.1 COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR005758: IPR000713: IPR013221: IPR004101; KEGG: fba:FIC_02465 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; UDP-n-acetylmuramate/alanine ligase 1136712 10001796 Riean_1040 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-n-acetylmuramate/alanine ligase YP_004045707.1 1135354 R 693978 CDS YP_004045708.1 313206531 10001797 complement(1136715..1137842) 1 NC_014738.1 COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR006009: IPR004276: IPR007235; KEGG: fba:FIC_02466 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; PRIAM: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR: Acetylglucosaminyltransferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase 1137842 10001797 Riean_1041 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase YP_004045708.1 1136715 R 693978 CDS YP_004045709.1 313206532 10001798 complement(1137869..1139110) 1 NC_014738.1 COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: fba:FIC_02467 cell division protein FtsW; PFAM: cell cycle protein; SPTR: Cell division protein; PFAM: Cell cycle protein; cell cycle protein 1139110 10001798 Riean_1042 Riemerella anatipestifer ATCC 11845 = DSM 15868 cell cycle protein YP_004045709.1 1137869 R 693978 CDS YP_004045710.1 313206533 10001799 complement(1139117..1140442) 1 NC_014738.1 COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR013027: IPR005762: IPR013221: IPR004101; KEGG: fba:FIC_02468 UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-n-acetylmuramoylalanine--D-glutamate ligase 1140442 10001799 Riean_1043 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-n-acetylmuramoylalanine--D-glutamate ligase YP_004045710.1 1139117 R 693978 CDS YP_004045711.1 313206534 10001800 complement(1140470..1141711) 1 NC_014738.1 COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR003524: IPR018480: IPR018481; KEGG: fba:FIC_02469 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-trans ferase; PFAM: Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; phospho-n-acetylmuramoyl-pentapeptide- transferase 1141711 10001800 Riean_1044 Riemerella anatipestifer ATCC 11845 = DSM 15868 phospho-n-acetylmuramoyl-pentapeptide- transferase YP_004045711.1 1140470 R 693978 CDS YP_004045712.1 313206535 10001801 complement(1141746..1143206) 1 NC_014738.1 COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR005761: IPR000713: IPR013221: IPR004101; KEGG: fba:FIC_02470 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-n-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1143206 10001801 Riean_1045 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-n-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_004045712.1 1141746 R 693978 CDS YP_004045713.1 313206536 10001802 complement(1143220..1145211) 1 NC_014738.1 COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460: IPR005543; KEGG: fba:FIC_02471 cell division protein FtsI (peptidoglycan synthetase); PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; PRIAM: Peptidoglycan glycosyltransferase; SMART: PASTA domain containing protein; SPTR: Cell division protein ftsI (Peptidoglycan synthetase); PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; peptidoglycan glycosyltransferase 1145211 10001802 Riean_1046 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidoglycan glycosyltransferase YP_004045713.1 1143220 R 693978 CDS YP_004045714.1 313206537 10001803 complement(1145201..1145557) 1 NC_014738.1 KEGG: fba:FIC_02472 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1145557 10001803 Riean_1047 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045714.1 1145201 R 693978 CDS YP_004045715.1 313206538 10001804 complement(1145579..1146472) 1 NC_014738.1 COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; InterPro IPR002903; KEGG: fba:FIC_02473 S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; s-adenosyl-methyltransferase mraw 1146472 10001804 Riean_1048 Riemerella anatipestifer ATCC 11845 = DSM 15868 s-adenosyl-methyltransferase mraw YP_004045715.1 1145579 R 693978 CDS YP_004045716.1 313206539 10001805 complement(1146492..1146992) 1 NC_014738.1 COGs: COG2001 conserved hypothetical protein; InterPro IPR003444: IPR020603; KEGG: fba:FIC_02474 cell division protein MraZ; PFAM: MraZ domain; SPTR: Protein mraZ; TIGRFAM: MraZ protein; PFAM: MraZ protein; TIGRFAM: mraZ protein; mraz protein 1146992 10001805 Riean_1049 Riemerella anatipestifer ATCC 11845 = DSM 15868 mraz protein YP_004045716.1 1146492 R 693978 CDS YP_004045717.1 313206540 10001806 1147210..1147974 1 NC_014738.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: fba:FIC_02476 beta-D-galactosidase, putative; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta fold superfamily hydrolase; PFAM: alpha/beta hydrolase fold; alpha/beta fold family hydrolase 1147974 10001806 Riean_1050 Riemerella anatipestifer ATCC 11845 = DSM 15868 alpha/beta fold family hydrolase YP_004045717.1 1147210 D 693978 CDS YP_004045718.1 313206541 10001807 1148041..1148667 1 NC_014738.1 COGs: COG0218 GTPase; InterPro IPR019987: IPR005225: IPR002917; KEGG: fba:FIC_02477 GTP-binding protein EngB; PFAM: GTP-binding protein HSR1-related; SPTR: Probable GTP-binding protein engB; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain; ribosome biogenesis GTP-binding protein ysxc 1148667 10001807 Riean_1051 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribosome biogenesis GTP-binding protein ysxc YP_004045718.1 1148041 D 693978 CDS YP_004045719.1 313206542 10001808 1148660..1149127 1 NC_014738.1 COGs: COG2153 acyltransferase; InterPro IPR000182; KEGG: ctc:CTC01168 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase; PFAM: Acetyltransferase (GNAT) family; Gcn5-like N-acetyltransferase 1149127 10001808 Riean_1052 Riemerella anatipestifer ATCC 11845 = DSM 15868 Gcn5-like N-acetyltransferase YP_004045719.1 1148660 D 693978 CDS YP_004045720.1 313206543 10001809 complement(1149136..1149678) 1 NC_014738.1 COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569; KEGG: fba:FIC_02516 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; peptide methionine sulfoxide reductase 1149678 10001809 Riean_1053 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptide methionine sulfoxide reductase YP_004045720.1 1149136 R 693978 CDS YP_004045721.1 313206544 10001810 1149962..1152352 1 NC_014738.1 COGs: COG0466 ATP-dependent Lon protease; InterPro IPR001984: IPR004815: IPR008268: IPR003111: IPR 003959: IPR003593; KEGG: fba:FIC_00128 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; ATP-dependent protease la 1152352 10001810 Riean_1054 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-dependent protease la YP_004045721.1 1149962 D 693978 CDS YP_004045722.1 313206545 10001811 complement(1152454..1153287) 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_02022 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1153287 10001811 Riean_1055 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045722.1 1152454 R 693978 CDS YP_004045723.1 313206546 10001817 complement(1159447..1160112) 1 NC_014738.1 KEGG: fba:FIC_00201 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1160112 10001817 Riean_1056 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045723.1 1159447 R 693978 CDS YP_004045724.1 313206547 10001818 complement(1160105..1160968) 1 NC_014738.1 COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: fba:FIC_00200 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; PRIAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dtdp-4-dehydrorhamnose reductase 1160968 10001818 Riean_1057 Riemerella anatipestifer ATCC 11845 = DSM 15868 dtdp-4-dehydrorhamnose reductase YP_004045724.1 1160105 R 693978 CDS YP_004045725.1 313206548 10001819 complement(1160989..1161483) 1 NC_014738.1 COGs: COG0824 thioesterase; KEGG: fba:FIC_00199 predicted thioesterase; SPTR: Putative uncharacterized protein; PFAM: Acyl-ACP thioesterase; thioesterase 1161483 10001819 Riean_1058 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioesterase YP_004045725.1 1160989 R 693978 CDS YP_004045726.1 313206549 10001820 complement(1161546..1162046) 1 NC_014738.1 InterPro IPR005632; KEGG: fba:FIC_00198 outer membrane protein H precursor; PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein H; PFAM: Outer membrane protein (OmpH-like); outer membrane chaperone skp (omph) 1162046 10001820 Riean_1059 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane chaperone skp (omph) YP_004045726.1 1161546 R 693978 CDS YP_004045727.1 313206550 10001821 complement(1162102..1162632) 1 NC_014738.1 InterPro IPR005632; KEGG: fba:FIC_00197 outer membrane protein H precursor; PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein H; PFAM: Outer membrane protein (OmpH-like); outer membrane chaperone skp (omph) 1162632 10001821 Riean_1060 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane chaperone skp (omph) YP_004045727.1 1162102 R 693978 CDS YP_004045728.1 313206551 10001822 complement(1162648..1165200) 1 NC_014738.1 COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474: IPR010827: IPR000184; KEGG: fba:FIC_00196 outer membrane protein assembly factor YaeT precursor; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, yaet protein 1165200 10001822 Riean_1061 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane protein assembly complex, yaet protein YP_004045728.1 1162648 R 693978 CDS YP_004045729.1 313206552 10001823 complement(1165233..1165979) 1 NC_014738.1 COGs: COG0020 Undecaprenyl pyrophosphate synthase; InterPro IPR001441: IPR018520; KEGG: fba:FIC_00195 undecaprenyl pyrophosphate synthetase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Di-trans,poly-cis-decaprenylcistransferase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; undecaprenyl diphosphate synthase 1165979 10001823 Riean_1062 Riemerella anatipestifer ATCC 11845 = DSM 15868 undecaprenyl diphosphate synthase YP_004045729.1 1165233 R 693978 CDS YP_004045730.1 313206553 10001824 complement(1165984..1166868) 1 NC_014738.1 KEGG: fba:FIC_00194 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1166868 10001824 Riean_1063 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045730.1 1165984 R 693978 CDS YP_004045731.1 313206554 10001825 complement(1166950..1168254) 1 NC_014738.1 COGs: COG1808 membrane protein; InterPro IPR005240; KEGG: cli:Clim_1362 hypothetical protein; PFAM: protein of unknown function DUF389; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; hypothetical protein 1168254 10001825 Riean_1064 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045731.1 1166950 R 693978 CDS YP_004045732.1 313206555 10001826 complement(1168254..1168907) 1 NC_014738.1 COGs: COG0688 Phosphatidylserine decarboxylase; InterPro IPR004428: IPR003817; KEGG: fba:FIC_02436 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: Phosphatidylserine decarboxylase proenzyme; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein; phosphatidylserine decarboxylase 1168907 10001826 Riean_1065 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphatidylserine decarboxylase YP_004045732.1 1168254 R 693978 CDS YP_004045733.1 313206556 10001827 complement(1168921..1169799) 1 NC_014738.1 COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: fba:FIC_02435 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family; phosphatidate cytidylyltransferase 1169799 10001827 Riean_1066 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphatidate cytidylyltransferase YP_004045733.1 1168921 R 693978 CDS YP_004045734.1 313206557 10001828 complement(1169821..1170405) 1 NC_014738.1 KEGG: fba:FIC_02434 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556; hypothetical protein 1170405 10001828 Riean_1067 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045734.1 1169821 R 693978 CDS YP_004045735.1 313206558 10001829 complement(1170510..1172171) 1 NC_014738.1 KEGG: fba:FIC_00106 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1172171 10001829 Riean_1068 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045735.1 1170510 R 693978 CDS YP_004045736.1 313206559 10001830 1172336..1173745 1 NC_014738.1 COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR001566: IPR010280: IPR002792; KEGG: fba:FIC_01972 RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; deoxyribonuclease/rho motif-related TRAM; SPTR: RNA methyltransferase, TrmA family; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; 23S rRNA m(5)u-1939 methyltransferase 1173745 10001830 Riean_1069 Riemerella anatipestifer ATCC 11845 = DSM 15868 23S rRNA m(5)u-1939 methyltransferase YP_004045736.1 1172336 D 693978 CDS YP_004045737.1 313206560 10001831 1173747..1174226 1 NC_014738.1 KEGG: fba:FIC_01971 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1174226 10001831 Riean_1070 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045737.1 1173747 D 693978 CDS YP_004045738.1 313206561 10001832 1174192..1174848 1 NC_014738.1 KEGG: fba:FIC_01970 conserved hypothetical protein, secreted; SPTR: Putative uncharacterized protein; hypothetical protein 1174848 10001832 Riean_1071 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045738.1 1174192 D 693978 CDS YP_004045739.1 313206562 10001833 complement(1174911..1175918) 1 NC_014738.1 COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR012080: IPR005986: IPR000534: IPR012280; KEGG: fba:FIC_02366 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); aspartate-semialdehyde dehydrogenase 1175918 10001833 Riean_1072 Riemerella anatipestifer ATCC 11845 = DSM 15868 aspartate-semialdehyde dehydrogenase YP_004045739.1 1174911 R 693978 CDS YP_004045740.1 313206563 10001834 complement(1176017..1176454) 1 NC_014738.1 KEGG: fba:FIC_02365 50S ribosomal protein L27; SPTR: Putative uncharacterized protein; 50S ribosomal protein L27 1176454 10001834 Riean_1073 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L27 YP_004045740.1 1176017 R 693978 CDS YP_004045741.1 313206564 10001835 complement(1176540..1177520) 1 NC_014738.1 COGs: COG0708 Exonuclease III; InterPro IPR005135; KEGG: fba:FIC_02484 AP endonuclease domain protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase 1177520 10001835 Riean_1074 Riemerella anatipestifer ATCC 11845 = DSM 15868 endonuclease/exonuclease/phosphatase YP_004045741.1 1176540 R 693978 CDS YP_004045742.1 313206565 10001836 complement(1177535..1178269) 1 NC_014738.1 COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: fba:FIC_02483 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Rhomboid family protein; PFAM: Rhomboid family; rhomboid family protein 1178269 10001836 Riean_1075 Riemerella anatipestifer ATCC 11845 = DSM 15868 rhomboid family protein YP_004045742.1 1177535 R 693978 CDS YP_004045743.1 313206566 10001837 complement(1178285..1180081) 1 NC_014738.1 COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); InterPro IPR014763: IPR014762: IPR003594: IPR013507: IPR 014790: IPR020667; KEGG: fba:FIC_02482 DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; MutL dimerisation; SPTR: DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; DNA mismatch repair protein mutl 1180081 10001837 Riean_1076 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA mismatch repair protein mutl YP_004045743.1 1178285 R 693978 CDS YP_004045744.1 313206567 10001838 1180461..1181000 1 NC_014738.1 KEGG: mmz:MmarC7_1517 cobaltochelatase subunit CobN; SPTR: Putative uncharacterized protein; hypothetical protein 1181000 10001838 Riean_1077 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045744.1 1180461 D 693978 CDS YP_004045745.1 313206568 10001839 1181026..1184145 1 NC_014738.1 InterPro IPR017985: IPR000601; KEGG: fps:FP0087 glycosyl hydrolase; PFAM: PKD domain containing protein; SPTR: Glycosyl hydrolase; PFAM: BNR/Asp-box repeat; pkd domain containing protein 1184145 10001839 Riean_1078 Riemerella anatipestifer ATCC 11845 = DSM 15868 pkd domain containing protein YP_004045745.1 1181026 D 693978 CDS YP_004045746.1 313206569 10001840 1184526..1184816 1 NC_014738.1 KEGG: ote:Oter_3065 PA14 domain-containing protein; SPTR: PA14 domain protein; hypothetical protein 1184816 10001840 Riean_1079 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045746.1 1184526 D 693978 CDS YP_004045747.1 313206570 10001841 1184854..1185372 1 NC_014738.1 COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: fba:FIC_00047 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; methionine-r-sulfoxide reductase 1185372 10001841 Riean_1080 Riemerella anatipestifer ATCC 11845 = DSM 15868 methionine-r-sulfoxide reductase YP_004045747.1 1184854 D 693978 CDS YP_004045748.1 313206571 10001842 complement(1185494..1185952) 1 NC_014738.1 KEGG: fps:FP0712 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1185952 10001842 Riean_1081 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045748.1 1185494 R 693978 CDS YP_004045749.1 313206572 10001843 complement(1185924..1186418) 1 NC_014738.1 KEGG: pml:ATP_00233 elongation factor Ts; SPTR: Putative uncharacterized protein; hypothetical protein 1186418 10001843 Riean_1082 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045749.1 1185924 R 693978 CDS YP_004045750.1 313206573 10001844 1186525..1186893 1 NC_014738.1 InterPro IPR001387; KEGG: hap:HAPS_0822 transcriptional regulator/helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, Cro/CI family; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 1186893 10001844 Riean_1083 Riemerella anatipestifer ATCC 11845 = DSM 15868 helix-turn-helix domain-containing protein YP_004045750.1 1186525 D 693978 CDS YP_004045751.1 313206574 10001845 complement(1186898..1187329) 1 NC_014738.1 COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: fba:FIC_00109 tRNA-specific adenosine-34 deaminase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Possible cytosine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cmp/dcmp deaminase zinc-binding protein 1187329 10001845 Riean_1084 Riemerella anatipestifer ATCC 11845 = DSM 15868 cmp/dcmp deaminase zinc-binding protein YP_004045751.1 1186898 R 693978 CDS YP_004045752.1 313206575 10001846 complement(1187393..1187893) 1 NC_014738.1 COGs: COG2032 Cu/Zn superoxide dismutase; InterPro IPR018152: IPR001424; KEGG: fba:FIC_02556 superoxide dismutase, copper/zinc binding; PFAM: superoxide dismutase copper/zinc binding; SPTR: Superoxide dismutase [Cu-Zn]; PFAM: Copper/zinc superoxide dismutase (SODC); superoxide dismutase copper/zinc binding protein 1187893 10001846 Riean_1085 Riemerella anatipestifer ATCC 11845 = DSM 15868 superoxide dismutase copper/zinc binding protein YP_004045752.1 1187393 R 693978 CDS YP_004045753.1 313206576 10001847 1188012..1189685 1 NC_014738.1 COGs: COG1165 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase; InterPro IPR004433: IPR012001; KEGG: fba:FIC_02456 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; PRIAM:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex ene-1-carboxylic-acidsynthase; SPTR:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexe ne-1-carboxylatesynthase; TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1189685 10001847 Riean_1086 Riemerella anatipestifer ATCC 11845 = DSM 15868 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase YP_004045753.1 1188012 D 693978 CDS YP_004045754.1 313206577 10001848 1189774..1191906 1 NC_014738.1 InterPro IPR019500; KEGG: fba:FIC_02517 hypothetical protein; PFAM: Peptidase S46; SPTR: Dipeptidyl-peptidase 7; PFAM: Peptidase S46; peptidase s46 1191906 10001848 Riean_1087 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase s46 YP_004045754.1 1189774 D 693978 CDS YP_004045755.1 313206578 10001849 complement(1191984..1192886) 1 NC_014738.1 KEGG: fba:FIC_00028 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3078); hypothetical protein 1192886 10001849 Riean_1088 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045755.1 1191984 R 693978 CDS YP_004045756.1 313206579 10001850 1193630..1194820 1 NC_014738.1 COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576; KEGG: fba:FIC_02582 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 1194820 10001850 Riean_1089 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoglycerate kinase YP_004045756.1 1193630 D 693978 CDS YP_004045757.1 313206580 10001851 1194895..1195392 1 NC_014738.1 KEGG: cpi:Cpin_6303 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1195392 10001851 Riean_1090 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045757.1 1194895 D 693978 CDS YP_004045758.1 313206581 10001852 complement(1195447..1196451) 1 NC_014738.1 COGs: COG1816 Adenosine deaminase; InterPro IPR006330: IPR001365; KEGG: acd:AOLE_13590 adenosine deaminase; PFAM: adenosine/AMP deaminase; PRIAM: Adenosine deaminase; SPTR: Putative uncharacterized protein; TIGRFAM: adenosine deaminase; PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase; adenosine deaminase 1196451 10001852 Riean_1091 Riemerella anatipestifer ATCC 11845 = DSM 15868 adenosine deaminase YP_004045758.1 1195447 R 693978 CDS YP_004045759.1 313206582 10001853 1196700..1199645 1 NC_014738.1 InterPro IPR012910: IPR000531; KEGG: fba:FIC_02316 hypothetical protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor plug 1199645 10001853 Riean_1092 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004045759.1 1196700 D 693978 CDS YP_004045760.1 313206583 10001854 1199666..1201129 1 NC_014738.1 InterPro IPR012944; KEGG: fba:FIC_02315 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: SusD family; ragb/susd domain-containing protein 1201129 10001854 Riean_1093 Riemerella anatipestifer ATCC 11845 = DSM 15868 ragb/susd domain-containing protein YP_004045760.1 1199666 D 693978 CDS YP_004045761.1 313206584 10001855 complement(1201210..1202763) 1 NC_014738.1 COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fba:FIC_01172 aminopeptidase, putative; PFAM: peptidase M28; SPTR: Aminopeptidase, putative; PFAM: Peptidase family M28; peptidase m28 1202763 10001855 Riean_1094 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m28 YP_004045761.1 1201210 R 693978 CDS YP_004045762.1 313206585 10001856 1203134..1203655 1 NC_014738.1 KEGG: ava:Ava_0364 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1203655 10001856 Riean_1095 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045762.1 1203134 D 693978 CDS YP_004045763.1 313206586 10001857 1203822..1203995 1 NC_014738.1 SPTR: Putative uncharacterized protein; hypothetical protein 1203995 10001857 Riean_1096 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045763.1 1203822 D 693978 CDS YP_004045764.1 313206587 10001858 1203996..1205261 1 NC_014738.1 KEGG: tcr:508293.80 mucin-associated surface protein (MASP); SPTR: Putative uncharacterized protein; hypothetical protein 1205261 10001858 Riean_1097 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045764.1 1203996 D 693978 CDS YP_004045765.1 313206588 10001859 1205280..1205846 1 NC_014738.1 KEGG: cat:CA2559_04065 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1205846 10001859 Riean_1098 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045765.1 1205280 D 693978 CDS YP_004045766.1 313206589 10001860 complement(1206062..1206940) 1 NC_014738.1 InterPro IPR002559; KEGG: cth:Cthe_2323 transposase, IS4; PFAM: transposase IS4 family protein; SPTR: Transposase; PFAM: Transposase DDE domain; transposase is4 family protein 1206940 10001860 Riean_1099 Riemerella anatipestifer ATCC 11845 = DSM 15868 transposase is4 family protein YP_004045766.1 1206062 R 693978 CDS YP_004045767.1 313206590 10001861 1206996..1207493 1 NC_014738.1 KEGG: ptm:GSPATT00024787001 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1207493 10001861 Riean_1100 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045767.1 1206996 D 693978 CDS YP_004045768.1 313206591 10001862 complement(1207705..1208535) 1 NC_014738.1 InterPro IPR000102: IPR013216; KEGG: fba:FIC_02581 SAM-dependent methyltransferase; PFAM: Methyltransferase type 11; SPTR: SAM dependent methyltransferase; PFAM: Methyltransferase domain; type 11 methyltransferase 1208535 10001862 Riean_1101 Riemerella anatipestifer ATCC 11845 = DSM 15868 type 11 methyltransferase YP_004045768.1 1207705 R 693978 CDS YP_004045769.1 313206592 10001863 complement(1208596..1210458) 1 NC_014738.1 COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; InterPro IPR004416: IPR020595: IPR002218; KEGG: fba:FIC_02580 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: glucose-inhibited division protein A; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; TIGRFAM: glucose inhibited division protein A; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; glucose inhibited division protein a 1210458 10001863 Riean_1102 Riemerella anatipestifer ATCC 11845 = DSM 15868 glucose inhibited division protein a YP_004045769.1 1208596 R 693978 CDS YP_004045770.1 313206593 10001864 complement(1210635..1211048) 1 NC_014738.1 COGs: COG0319 metal-dependent hydrolase; InterPro IPR002036; KEGG: fba:FIC_02579 predicted metal-dependent hydrolase; PFAM: protein of unknown function UPF0054; SPTR: Putative metalloprotease HMPREF0204_4721; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; hypothetical protein 1211048 10001864 Riean_1103 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045770.1 1210635 R 693978 CDS YP_004045771.1 313206594 10001865 complement(1211065..1213230) 1 NC_014738.1 COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR000037: IPR002641: IPR010827; KEGG: fba:FIC_02578 patatin-like phospholipase; PFAM: Patatin; surface antigen variable number repeat-containing protein; SPTR: Putative patatin-like phospholipase; PFAM: Patatin-like phospholipase; patatin 1213230 10001865 Riean_1104 Riemerella anatipestifer ATCC 11845 = DSM 15868 patatin YP_004045771.1 1211065 R 693978 CDS YP_004045772.1 313206595 10001866 1213349..1214251 1 NC_014738.1 KEGG: fba:FIC_02308 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1214251 10001866 Riean_1105 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045772.1 1213349 D 693978 CDS YP_004045773.1 313206596 10001867 1214385..1215989 1 NC_014738.1 COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); InterPro IPR001272: IPR015994; KEGG: fba:FIC_02307 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP); PRIAM: Phosphoenolpyruvate carboxykinase (ATP); SPTR: Phosphoenolpyruvate carboxykinase [ATP]; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase 1215989 10001867 Riean_1106 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoenolpyruvate carboxykinase YP_004045773.1 1214385 D 693978 CDS YP_004045774.1 313206597 10001868 1216146..1216511 1 NC_014738.1 KEGG: taf:THA_1924 GGDEF family protein; SPTR: Ggdef family protein; hypothetical protein 1216511 10001868 Riean_1107 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045774.1 1216146 D 693978 CDS YP_004045775.1 313206598 10001869 1216638..1217720 1 NC_014738.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fjo:Fjoh_4863 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Acridine efflux pump; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; efflux transporter, rnd family, mfp subunit 1217720 10001869 Riean_1108 Riemerella anatipestifer ATCC 11845 = DSM 15868 efflux transporter, rnd family, mfp subunit YP_004045775.1 1216638 D 693978 CDS YP_004045776.1 313206599 10001870 1217732..1220899 1 NC_014738.1 COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036: IPR004764: IPR000731; KEGG: cpi:Cpin_5360 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; SPTR: Acriflavin resistance protein D; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux-1 family transporter 1220899 10001870 Riean_1109 Riemerella anatipestifer ATCC 11845 = DSM 15868 hydrophobe/amphiphile efflux-1 family transporter YP_004045776.1 1217732 D 693978 CDS YP_004045777.1 313206600 10001871 1220889..1222325 1 NC_014738.1 COGs: COG1538 Outer membrane protein; InterPro IPR010131: IPR003423; KEGG: cpi:Cpin_5361 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; SPTR: RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; rnd efflux system, outer membrane lipoprotein, nodt family 1222325 10001871 Riean_1110 Riemerella anatipestifer ATCC 11845 = DSM 15868 rnd efflux system, outer membrane lipoprotein, nodt family YP_004045777.1 1220889 D 693978 CDS YP_004045778.1 313206601 10001872 1222369..1223751 1 NC_014738.1 COGs: COG1109 Phosphomannomutase; InterPro IPR005841: IPR016066: IPR005844: IPR005845: IPR 005846: IPR005843; KEGG: fba:FIC_02528 phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: Possible phosphoglucosamine mutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i 1223751 10001872 Riean_1111 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i YP_004045778.1 1222369 D 693978 CDS YP_004045779.1 313206602 10001873 1223830..1225209 1 NC_014738.1 InterPro IPR001440: IPR019734: IPR013026; KEGG: fba:FIC_02527 conserved hypothetical protein, TPR domain protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat protein; PFAM: Tetratricopeptide repeat; tetratricopeptide tpr_1 repeat-containing protein 1225209 10001873 Riean_1112 Riemerella anatipestifer ATCC 11845 = DSM 15868 tetratricopeptide tpr_1 repeat-containing protein YP_004045779.1 1223830 D 693978 CDS YP_004045780.1 313206603 10001874 complement(1225206..1225424) 1 NC_014738.1 COGs: COG3530 conserved hypothetical protein; KEGG: fba:FIC_02491 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1225424 10001874 Riean_1113 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045780.1 1225206 R 693978 CDS YP_004045781.1 313206604 10001875 complement(1225414..1226535) 1 NC_014738.1 COGs: COG0628 permease; InterPro IPR002549; KEGG: fba:FIC_02490 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: Membrane protein, putative; PFAM: Domain of unknown function DUF20; hypothetical protein 1226535 10001875 Riean_1114 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045781.1 1225414 R 693978 CDS YP_004045782.1 313206605 10001876 complement(1226558..1227298) 1 NC_014738.1 KEGG: fba:FIC_02488 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1227298 10001876 Riean_1115 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045782.1 1226558 R 693978 CDS YP_004045783.1 313206606 10001877 1227343..1228320 1 NC_014738.1 COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR019999: IPR015890; KEGG: fba:FIC_02487 para-aminobenzoate synthase component I; PFAM: Chorismate binding-like; SPTR: Para-aminobenzoate synthase component I; manually curated; PFAM: chorismate binding enzyme; aminodeoxychorismate synthase, subunit i 1228320 10001877 Riean_1116 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminodeoxychorismate synthase, subunit i YP_004045783.1 1227343 D 693978 CDS YP_004045784.1 313206607 10001878 1228304..1228897 1 NC_014738.1 COGs: COG0115 BrancheD-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: fba:FIC_02486 aminodeoxychorismate lyase; PFAM: aminotransferase class IV; SPTR: Para-aminobenzoate synthase component I; PFAM: Aminotransferase class IV; aminotransferase class iv 1228897 10001878 Riean_1117 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminotransferase class iv YP_004045784.1 1228304 D 693978 CDS YP_004045785.1 313206608 10001879 complement(1228936..1229124) 1 NC_014738.1 KEGG: bfs:BF2692 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 1229124 10001879 Riean_1118 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045785.1 1228936 R 693978 CDS YP_004045786.1 313206609 10001880 complement(1229127..1229411) 1 NC_014738.1 InterPro IPR010916: IPR006121; KEGG: tgr:Tgr7_0577 heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein; PFAM: Heavy-metal-associated domain; heavy metal transport/detoxification protein 1229411 10001880 Riean_1119 Riemerella anatipestifer ATCC 11845 = DSM 15868 heavy metal transport/detoxification protein YP_004045786.1 1229127 R 693978 CDS YP_004045787.1 313206610 10001881 1229652..1231730 1 NC_014738.1 KEGG: coc:Coch_0251 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1231730 10001881 Riean_1120 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045787.1 1229652 D 693978 CDS YP_004045788.1 313206611 10001882 complement(1232023..1233138) 1 NC_014738.1 COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: dat:HRM2_18520 hypothetical protein; PFAM: filamentation induced by cAMP protein Fic; SPTR: Filamentation induced by cAMP protein Fic; PFAM: Fic/DOC family; filamentation induced by camp protein fic 1233138 10001882 Riean_1121 Riemerella anatipestifer ATCC 11845 = DSM 15868 filamentation induced by camp protein fic YP_004045788.1 1232023 R 693978 CDS YP_004045789.1 313206612 10001883 complement(1233333..1234607) 1 NC_014738.1 KEGG: fba:FIC_02555 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1234607 10001883 Riean_1122 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045789.1 1233333 R 693978 CDS YP_004045790.1 313206613 10001884 complement(1234647..1236179) 1 NC_014738.1 COGs: COG0397 conserved hypothetical protein; InterPro IPR003846; KEGG: fba:FIC_02554 protein of hypothetical function UPF0061; PFAM: protein of unknown function UPF0061; SPTR: Protein of hypothetical function UPF0061; PFAM: Uncharacterized ACR, YdiU/UPF0061 family; hypothetical protein 1236179 10001884 Riean_1123 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045790.1 1234647 R 693978 CDS YP_004045791.1 313206614 10001885 complement(1236243..1238399) 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; KEGG: fps:FP1882 TonB-dependent outer membrane receptorprecursor; SPTR: Probable TonB-dependent outer membrane receptorprecursor; tonb-dependent outer membrane receptor 1238399 10001885 Riean_1124 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent outer membrane receptor YP_004045791.1 1236243 R 693978 CDS YP_004045792.1 313206615 10001886 1238565..1239761 1 NC_014738.1 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR001176: IPR004839; KEGG: fba:FIC_02175 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Aspartate aminotransferase; PFAM: Aminotransferase class I and II; aminotransferase class i and ii 1239761 10001886 Riean_1125 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminotransferase class i and ii YP_004045792.1 1238565 D 693978 CDS YP_004045793.1 313206616 10001887 1240016..1243414 1 NC_014738.1 COGs: COG0060 Isoleucyl-tRNA synthetase; InterPro IPR015905: IPR002301: IPR002300: IPR013155; KEGG: fba:FIC_00180 isoleucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1243414 10001887 Riean_1126 Riemerella anatipestifer ATCC 11845 = DSM 15868 isoleucyl-tRNA synthetase YP_004045793.1 1240016 D 693978 CDS YP_004045794.1 313206617 10001888 1243441..1243821 1 NC_014738.1 InterPro IPR000962; KEGG: fba:FIC_00179 DnaK suppressor protein, putative; SPTR: DnaK suppressor protein, putative; PFAM: Prokaryotic dksA/traR C4-type zinc finger; dnak suppressor protein, putative 1243821 10001888 Riean_1127 Riemerella anatipestifer ATCC 11845 = DSM 15868 dnak suppressor protein, putative YP_004045794.1 1243441 D 693978 CDS YP_004045795.1 313206618 10001889 1243907..1244545 1 NC_014738.1 COGs: COG0597 Lipoprotein signal peptidase; InterPro IPR001872; KEGG: fba:FIC_00176 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; SPTR: Lipoprotein signal peptidase; PFAM: Signal peptidase (SPase) II; peptidase a8 signal peptidase ii 1244545 10001889 Riean_1128 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase a8 signal peptidase ii YP_004045795.1 1243907 D 693978 CDS YP_004045796.1 313206619 10001890 1244550..1245191 1 NC_014738.1 COGs: COG2949 Uncharacterized membrane protein; InterPro IPR003848; KEGG: bth:BT_0567 protein involved in barrier function of the cell envelope; PFAM: protein of unknown function DUF218; SPTR: Membrane protein; PFAM: DUF218 domain; hypothetical protein 1245191 10001890 Riean_1129 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045796.1 1244550 D 693978 CDS YP_004045797.1 313206620 10001891 1245271..1247067 1 NC_014738.1 COGs: COG0481 Membrane GTPase LepA; InterPro IPR000795: IPR005225: IPR006297: IPR004161: IPR 000640: IPR013842; KEGG: fba:FIC_02539 GTP-binding protein LepA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein LepA domain protein; SPTR: GTP-binding protein lepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; GTP-binding protein LepA C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; GTP-binding protein lepa 1247067 10001891 Riean_1130 Riemerella anatipestifer ATCC 11845 = DSM 15868 GTP-binding protein lepa YP_004045797.1 1245271 D 693978 CDS YP_004045798.1 313206621 10001892 1247267..1247596 1 NC_014738.1 COGs: COG0316 conserved hypothetical protein; InterPro IPR016092: IPR017870: IPR000361; KEGG: fba:FIC_00051 probable iron binding protein from the HesB_IscA_SufA family; PFAM: HesB/YadR/YfhF-family protein; SPTR: Scaffold protein for iron-sulphur cluster assembly; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein 1247596 10001892 Riean_1131 Riemerella anatipestifer ATCC 11845 = DSM 15868 iron-sulfur cluster assembly accessory protein YP_004045798.1 1247267 D 693978 CDS YP_004045799.1 313206622 10001893 1247653..1248069 1 NC_014738.1 KEGG: zpr:ZPR_0216 S23 ribosomal protein; SPTR: S23 ribosomal protein; PFAM: S23 ribosomal protein; s23 ribosomal protein 1248069 10001893 Riean_1132 Riemerella anatipestifer ATCC 11845 = DSM 15868 s23 ribosomal protein YP_004045799.1 1247653 D 693978 CDS YP_004045800.1 313206623 10001894 1248169..1249614 1 NC_014738.1 COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231: IPR000825; KEGG: fba:FIC_00052 cysteine desulfurase activator complex subunit SufB; PFAM: SufBD protein; SPTR: ABC superfamily ATP binding cassette transporter, membrane protein; TIGRFAM: FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; iron-regulated ABC transporter membrane component sufb 1249614 10001894 Riean_1133 Riemerella anatipestifer ATCC 11845 = DSM 15868 iron-regulated ABC transporter membrane component sufb YP_004045800.1 1248169 D 693978 CDS YP_004045801.1 313206624 10001895 1249692..1250558 1 NC_014738.1 COGs: COG4588 Accessory colonization factor AcfC contains ABC-type periplasmic domain; KEGG: nwa:Nwat_0735 AcfC-like protein; SPTR: Putative uncharacterized protein; acfc-like protein 1250558 10001895 Riean_1134 Riemerella anatipestifer ATCC 11845 = DSM 15868 acfc-like protein YP_004045801.1 1249692 D 693978 CDS YP_004045802.1 313206625 10001896 1250627..1250938 1 NC_014738.1 KEGG: coc:Coch_1942 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1250938 10001896 Riean_1135 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045802.1 1250627 D 693978 CDS YP_004045803.1 313206626 10001897 1250959..1251690 1 NC_014738.1 KEGG: bth:BT_0817 lipoprotein, function unknown; SPTR: Lipoprotein; PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance; hypothetical protein 1251690 10001897 Riean_1136 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045803.1 1250959 D 693978 CDS YP_004045804.1 313206627 10001898 1251746..1252153 1 NC_014738.1 COGs: COG2351 Transthyretin-like protein; InterPro IPR000895: IPR014306; KEGG: coc:Coch_0235 hydroxyisourate hydrolase; PFAM: Transthyretin; SMART: Transthyretin; SPTR: 5-hydroxyisourate hydrolase; TIGRFAM: hydroxyisourate hydrolase; PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase; hydroxyisourate hydrolase 1252153 10001898 Riean_1137 Riemerella anatipestifer ATCC 11845 = DSM 15868 hydroxyisourate hydrolase YP_004045804.1 1251746 D 693978 CDS YP_004045805.1 313206628 10001899 1252224..1252697 1 NC_014738.1 COGs: COG3193 Uncharacterized protein possibly involved in utilization of glycolate and propanediol; InterPro IPR005624; KEGG: fba:FIC_01070 secreted protein; PFAM: protein of unknown function DUF336; SPTR: Putative secreted protein; PFAM: Domain of unknown function (DUF336); hypothetical protein 1252697 10001899 Riean_1138 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045805.1 1252224 D 693978 CDS YP_004045806.1 313206629 10001900 1252729..1253469 1 NC_014738.1 COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR010230: IPR003439: IPR003593; KEGG: fba:FIC_00053 iron-sulfur cluster assembly ATPase protein SufC; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; fes assembly ATPase sufc 1253469 10001900 Riean_1139 Riemerella anatipestifer ATCC 11845 = DSM 15868 fes assembly ATPase sufc YP_004045806.1 1252729 D 693978 CDS YP_004045807.1 313206630 10001901 1253584..1254864 1 NC_014738.1 COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR011542: IPR000825; KEGG: fba:FIC_00054 iron-sulfur cluster assembly protein SufD; PFAM: SufBD protein; SPTR: FeS assembly protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1; fes assembly protein sufd 1254864 10001901 Riean_1140 Riemerella anatipestifer ATCC 11845 = DSM 15868 fes assembly protein sufd YP_004045807.1 1253584 D 693978 CDS YP_004045808.1 313206631 10001902 1254931..1255458 1 NC_014738.1 KEGG: fps:FP0101 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1255458 10001902 Riean_1141 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045808.1 1254931 D 693978 CDS YP_004045809.1 313206632 10001903 complement(1255421..1256182) 1 NC_014738.1 COGs: COG1521 Putative transcriptional regulator protein; InterPro IPR004619; KEGG: fba:FIC_00108 pantothenate kinase type III, CoaX-like protein; PFAM: Bvg accessory factor; PRIAM: Pantothenate kinase; SPTR: Pantothenate kinase type III, CoaX-like protein; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; pantothenate kinase 1256182 10001903 Riean_1142 Riemerella anatipestifer ATCC 11845 = DSM 15868 pantothenate kinase YP_004045809.1 1255421 R 693978 CDS YP_004045810.1 313206633 10001904 complement(1256210..1258072) 1 NC_014738.1 InterPro IPR001202; KEGG: fba:FIC_00107 Zn-dependent aminopeptidase; SPTR: Zn-dependent aminopeptidase; PFAM: Peptidase family M1; zn-dependent aminopeptidase 1258072 10001904 Riean_1143 Riemerella anatipestifer ATCC 11845 = DSM 15868 zn-dependent aminopeptidase YP_004045810.1 1256210 R 693978 CDS YP_004045811.1 313206634 10001905 1258191..1258547 1 NC_014738.1 KEGG: fba:FIC_02423 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1258547 10001905 Riean_1144 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045811.1 1258191 D 693978 CDS YP_004045812.1 313206635 10001906 1258675..1260219 1 NC_014738.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR003661: IPR003594: IPR005467; KEGG: fba:FIC_02421 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Two-component regulatory system, sensor kinase protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 1260219 10001906 Riean_1145 Riemerella anatipestifer ATCC 11845 = DSM 15868 integral membrane sensor signal transduction histidine kinase YP_004045812.1 1258675 D 693978 CDS YP_004045813.1 313206636 10001907 1260238..1260924 1 NC_014738.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a wingeD-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: fba:FIC_02420 two-component system, transcriptional regulatory protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 1260924 10001907 Riean_1146 Riemerella anatipestifer ATCC 11845 = DSM 15868 winged helix family two component transcriptional regulator YP_004045813.1 1260238 D 693978 CDS YP_004045814.1 313206637 10001908 1261085..1261738 1 NC_014738.1 KEGG: fba:FIC_00662 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1261738 10001908 Riean_1147 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045814.1 1261085 D 693978 CDS YP_004045815.1 313206638 10001909 1261738..1263045 1 NC_014738.1 COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR005750: IPR001986; KEGG: fba:FIC_00663 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-n-acetylglucosamine1- carboxyvinyltransferase 1263045 10001909 Riean_1148 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-n-acetylglucosamine1- carboxyvinyltransferase YP_004045815.1 1261738 D 693978 CDS YP_004045816.1 313206639 10001910 1263070..1263978 1 NC_014738.1 COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR018022: IPR002627; KEGG: fba:FIC_00293 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA); tRNA delta(2)-isopentenylpyrophosphate transferase 1263978 10001910 Riean_1149 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA delta(2)-isopentenylpyrophosphate transferase YP_004045816.1 1263070 D 693978 CDS YP_004045817.1 313206640 10001911 1263980..1264537 1 NC_014738.1 COGs: COG1225 Peroxiredoxin; InterPro IPR000866: IPR017936; KEGG: fba:FIC_00294 PPO candidate 1; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen 1264537 10001911 Riean_1150 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkyl hydroperoxide reductase/ thiol specific antioxidant/ mal allergen YP_004045817.1 1263980 D 693978 CDS YP_004045818.1 313206641 10001912 1264566..1265114 1 NC_014738.1 KEGG: eum:ECUMN_4029 hypothetical protein; exported protein; SPTR: Putative lipoprotein; hypothetical protein 1265114 10001912 Riean_1151 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045818.1 1264566 D 693978 CDS YP_004045819.1 313206642 10001913 complement(1265264..1265521) 1 NC_014738.1 COGs: COG0211 Ribosomal protein L27; InterPro IPR001684: IPR018261; KEGG: fba:FIC_02444 50S ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein l27p 1265521 10001913 Riean_1152 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l27p YP_004045819.1 1265264 R 693978 CDS YP_004045820.1 313206643 10001914 complement(1265556..1266182) 1 NC_014738.1 COGs: COG0261 Ribosomal protein L21; InterPro IPR001787: IPR018258; KEGG: fps:FP2217 50S ribosomal protein L21; PFAM: ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein l21p 1266182 10001914 Riean_1153 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l21p YP_004045820.1 1265556 R 693978 CDS YP_004045821.1 313206644 10001915 1266393..1267073 1 NC_014738.1 KEGG: tdn:Suden_0640 DNA gyrase subunit A; SPTR: Putative uncharacterized protein; hypothetical protein 1267073 10001915 Riean_1154 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045821.1 1266393 D 693978 CDS YP_004045822.1 313206645 10001916 complement(1267163..1268182) 1 NC_014738.1 COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; InterPro IPR003170: IPR006094: IPR011601: IPR016166; KEGG: fba:FIC_02173 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylmuramate dehydrogenase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-n-acetylenolpyruvoylglucosamine reductase 1268182 10001916 Riean_1155 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-n-acetylenolpyruvoylglucosamine reductase YP_004045822.1 1267163 R 693978 CDS YP_004045823.1 313206646 10001917 complement(1268250..1268888) 1 NC_014738.1 COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: fba:FIC_00295 hydroxyacylglutathione hydrolase; SPTR: Hydroxyacylglutathione hydrolase; PFAM: Metallo-beta-lactamase superfamily; hydroxyacylglutathione hydrolase 1268888 10001917 Riean_1156 Riemerella anatipestifer ATCC 11845 = DSM 15868 hydroxyacylglutathione hydrolase YP_004045823.1 1268250 R 693978 CDS YP_004045824.1 313206647 10001919 complement(1270291..1271595) 1 NC_014738.1 COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR003997: IPR000089; KEGG: dfe:Dfer_0709 secretion protein HlyD family protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Secretion protein HlyD family protein; PFAM: HlyD family secretion protein; biotin/lipoyl attachment domain-containing protein 1271595 10001919 Riean_1158 Riemerella anatipestifer ATCC 11845 = DSM 15868 biotin/lipoyl attachment domain-containing protein YP_004045824.1 1270291 R 693978 CDS YP_004045825.1 313206648 10001920 complement(1271606..1273258) 1 NC_014738.1 COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439: IPR017940; KEGG: dfe:Dfer_0708 ABC transporter related; PFAM: ABC transporter related; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter 1273258 10001920 Riean_1159 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045825.1 1271606 R 693978 CDS YP_004045826.1 313206649 10001921 complement(1273513..1275957) 1 NC_014738.1 COGs: COG0787 Alanine racemase; InterPro IPR000821: IPR000713: IPR013221: IPR001608: IPR 011079; KEGG: fba:FIC_02577 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; PFAM: alanine racemase domain protein; Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: Bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; TIGRFAM: alanine racemase; PFAM: Alanine racemase, C-terminal domain; Mur ligase family, catalytic domain; Alanine racemase, N-terminal domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; alanine racemase; alanine racemase 1275957 10001921 Riean_1160 Riemerella anatipestifer ATCC 11845 = DSM 15868 alanine racemase YP_004045826.1 1273513 R 693978 CDS YP_004045827.1 313206650 10001922 complement(1275964..1276551) 1 NC_014738.1 COGs: COG1435 Thymidine kinase; InterPro IPR001267; KEGG: fba:FIC_02576 thymidine kinase; PFAM: thymidine kinase; PRIAM: Thymidine kinase; SPTR: Thymidine kinase; PFAM: Thymidine kinase; thymidine kinase 1276551 10001922 Riean_1161 Riemerella anatipestifer ATCC 11845 = DSM 15868 thymidine kinase YP_004045827.1 1275964 R 693978 CDS YP_004045828.1 313206651 10001923 1276615..1277457 1 NC_014738.1 KEGG: fba:FIC_02575 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1277457 10001923 Riean_1162 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045828.1 1276615 D 693978 CDS YP_004045829.1 313206652 10001924 1277462..1278136 1 NC_014738.1 COGs: COG0313 methyltransferase; InterPro IPR008189: IPR000878; KEGG: fba:FIC_02573 tetrapyrrole (corrin-porphyrin) methylase family protein UPF0011; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Tetrapyrrole (Corrin-Porphyrin) methylase family protein UPF0011; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase 1278136 10001924 Riean_1163 Riemerella anatipestifer ATCC 11845 = DSM 15868 uroporphyrin-iii c/tetrapyrrole (corrin/porphyrin) methyltransferase YP_004045829.1 1277462 D 693978 CDS YP_004045830.1 313206653 10001925 1278185..1278928 1 NC_014738.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198: IPR011284: IPR020904; KEGG: fba:FIC_02572 3-oxoacyl-[acyl-carrier protein] reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-[acyl-carrier protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 1278928 10001925 Riean_1164 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-oxoacyl-(acyl-carrier-protein) reductase YP_004045830.1 1278185 D 693978 CDS YP_004045831.1 313206654 10001926 complement(1279137..1281218) 1 NC_014738.1 KEGG: fjo:Fjoh_0536 TonB-dependent receptor; SPTR: TonB-dependent receptor; hypothetical protein 1281218 10001926 Riean_1165 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045831.1 1279137 R 693978 CDS YP_004045832.1 313206655 10001927 complement(1281246..1281623) 1 NC_014738.1 KEGG: tme:Tmel_1130 hypothetical protein; SPTR: Probable hydrolase; hypothetical protein 1281623 10001927 Riean_1166 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045832.1 1281246 R 693978 CDS YP_004045833.1 313206656 10001928 1281748..1282506 1 NC_014738.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: cpi:Cpin_5158 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, luxR family; transcriptional regulator, luxr family 1282506 10001928 Riean_1167 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, luxr family YP_004045833.1 1281748 D 693978 CDS YP_004045834.1 313206657 10001929 1282633..1282926 1 NC_014738.1 KEGG: ath:ArthCp031 acetyl-CoA carboxylase beta subunit; SPTR: Cytosine-specific methyltransferase; hypothetical protein 1282926 10001929 Riean_1168 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045834.1 1282633 D 693978 CDS YP_004045835.1 313206658 10001930 complement(1283001..1285166) 1 NC_014738.1 COGs: COG0557 Exoribonuclease R; InterPro IPR011805: IPR004476: IPR001900: IPR013223: IPR 003029; KEGG: fba:FIC_00002 ribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SPTR: Possible ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; rnase r 1285166 10001930 Riean_1169 Riemerella anatipestifer ATCC 11845 = DSM 15868 rnase r YP_004045835.1 1283001 R 693978 CDS YP_004045836.1 313206659 10001931 complement(1285232..1285663) 1 NC_014738.1 COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500: IPR004785; KEGG: fba:FIC_00001 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; SPTR: Ribose-5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; sugar-phosphate isomerase, rpib/laca/lacb family 1285663 10001931 Riean_1170 Riemerella anatipestifer ATCC 11845 = DSM 15868 sugar-phosphate isomerase, rpib/laca/lacb family YP_004045836.1 1285232 R 693978 CDS YP_004045837.1 313206660 10001932 complement(1285748..1286851) 1 NC_014738.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fba:FIC_02524 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 1286851 10001932 Riean_1171 Riemerella anatipestifer ATCC 11845 = DSM 15868 group 1 glycosyl transferase YP_004045837.1 1285748 R 693978 CDS YP_004045838.1 313206661 10001933 complement(1286848..1287060) 1 NC_014738.1 InterPro IPR020137; KEGG: cat:CA2559_01580 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1287060 10001933 Riean_1172 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045838.1 1286848 R 693978 CDS YP_004045839.1 313206662 10001934 1287207..1289714 1 NC_014738.1 COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterPro IPR001270: IPR018368: IPR004176: IPR003959: IPR 013093: IPR019489: IPR003593; KEGG: fba:FIC_02526 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATPase with chaperone activity ATP-binding subunit; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); ATPase AAA-2 domain-containing protein 1289714 10001934 Riean_1173 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATPase AAA-2 domain-containing protein YP_004045839.1 1287207 D 693978 CDS YP_004045840.1 313206663 10001935 1289786..1290751 1 NC_014738.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: fba:FIC_01931 probable oxidoreductase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Probable oxidoreductase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase domain-containing protein 1290751 10001935 Riean_1174 Riemerella anatipestifer ATCC 11845 = DSM 15868 oxidoreductase domain-containing protein YP_004045840.1 1289786 D 693978 CDS YP_004045841.1 313206664 10001936 1290773..1291192 1 NC_014738.1 COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: fba:FIC_02523 sulfur acceptor protein SufE for iron-sulfur cluster assembly; PFAM: Fe-S metabolism associated SufE; SPTR: SufE family Fe-S protein; PFAM: Fe-S metabolism associated domain; cysteine desulfuration protein sufe 1291192 10001936 Riean_1175 Riemerella anatipestifer ATCC 11845 = DSM 15868 cysteine desulfuration protein sufe YP_004045841.1 1290773 D 693978 CDS YP_004045842.1 313206665 10001937 1291202..1292164 1 NC_014738.1 COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: fba:FIC_02522 heptosyltransferase; PFAM: glycosyl transferase family 9; SPTR: Heptosyltransferase; PFAM: Glycosyltransferase family 9 (heptosyltransferase); glycosyl transferase family protein 1292164 10001937 Riean_1176 Riemerella anatipestifer ATCC 11845 = DSM 15868 glycosyl transferase family protein YP_004045842.1 1291202 D 693978 CDS YP_004045843.1 313206666 10001938 1292164..1293066 1 NC_014738.1 InterPro IPR001173; KEGG: fps:FP1861 glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1293066 10001938 Riean_1177 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004045843.1 1292164 D 693978 CDS YP_004045844.1 313206667 10001939 complement(1293087..1293854) 1 NC_014738.1 COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: fba:FIC_02567 stationary phase survival protein SurE; PFAM: Survival protein SurE; SPTR: 5'-nucleotidase surE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; stationary-phase survival protein sure 1293854 10001939 Riean_1178 Riemerella anatipestifer ATCC 11845 = DSM 15868 stationary-phase survival protein sure YP_004045844.1 1293087 R 693978 CDS YP_004045845.1 313206668 10001940 1293989..1296109 1 NC_014738.1 COGs: COG0793 Periplasmic protease; InterPro IPR004447: IPR001478: IPR005151; KEGG: fba:FIC_02566 probable periplasmic tail-specific proteinase; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; PRIAM: C-terminal processing peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Possible C-terminal processing peptidase; TIGRFAM: carboxyl-terminal protease; PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); carboxyl-terminal protease 1296109 10001940 Riean_1179 Riemerella anatipestifer ATCC 11845 = DSM 15868 carboxyl-terminal protease YP_004045845.1 1293989 D 693978 CDS YP_004045846.1 313206669 10001941 1296186..1297061 1 NC_014738.1 COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: cbd:CBUD_0384 mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: Putative efflux protein; PFAM: Mechanosensitive ion channel; mscs mechanosensitive ion channel 1297061 10001941 Riean_1180 Riemerella anatipestifer ATCC 11845 = DSM 15868 mscs mechanosensitive ion channel YP_004045846.1 1296186 D 693978 CDS YP_004045847.1 313206670 10001942 complement(1297073..1297870) 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_00050 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1297870 10001942 Riean_1181 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045847.1 1297073 R 693978 CDS YP_004045848.1 313206671 10001943 complement(1297897..1298304) 1 NC_014738.1 COGs: COG3011 conserved hypothetical protein; InterPro IPR007263; KEGG: fba:FIC_00661 hypothetical protein; PFAM: thiol-disulphide oxidoreductase DCC; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF393; thiol-disulfide oxidoreductase dcc 1298304 10001943 Riean_1182 Riemerella anatipestifer ATCC 11845 = DSM 15868 thiol-disulfide oxidoreductase dcc YP_004045848.1 1297897 R 693978 CDS YP_004045849.1 313206672 10001944 complement(1298311..1298805) 1 NC_014738.1 KEGG: fba:FIC_00660 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1298805 10001944 Riean_1183 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045849.1 1298311 R 693978 CDS YP_004045850.1 313206673 10001945 1298910..1299326 1 NC_014738.1 COGs: COG0757 3-dehydroquinate dehydratase II; InterPro IPR001874; KEGG: fba:FIC_02063 3-dehydroquinate dehydratase II; PFAM: dehydroquinase class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: 3-dehydroquinate dehydratase II; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; 3-dehydroquinate dehydratase 1299326 10001945 Riean_1184 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-dehydroquinate dehydratase YP_004045850.1 1298910 D 693978 CDS YP_004045851.1 313206674 10001946 1299427..1300695 1 NC_014738.1 COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: fba:FIC_02551 tpl protein; PFAM: PSP1 domain protein; SPTR: Tpl protein; PFAM: PSP1 C-terminal conserved region; psp1 domain-containing protein 1300695 10001946 Riean_1185 Riemerella anatipestifer ATCC 11845 = DSM 15868 psp1 domain-containing protein YP_004045851.1 1299427 D 693978 CDS YP_004045852.1 313206675 10001947 1300695..1301165 1 NC_014738.1 InterPro IPR020018; KEGG: fba:FIC_02552 GldH; SPTR: GldH; TIGRFAM: gliding motility-associated lipoprotein GldH; TIGRFAM: gliding motility-associated lipoprotein GldH; gliding motility protein gldh 1301165 10001947 Riean_1186 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein gldh YP_004045852.1 1300695 D 693978 CDS YP_004045853.1 313206676 10001948 1301178..1303547 1 NC_014738.1 COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264: IPR001460; KEGG: fba:FIC_02553 monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 1A; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; peptidoglycan glycosyltransferase 1303547 10001948 Riean_1187 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidoglycan glycosyltransferase YP_004045853.1 1301178 D 693978 CDS YP_004045854.1 313206677 10001949 1303851..1304603 1 NC_014738.1 COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594; KEGG: rfr:Rfer_3218 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: UBA/THIF-type NAD/FAD binding protein; PFAM: ThiF family; uba/thif-type nad/fad binding protein 1304603 10001949 Riean_1188 Riemerella anatipestifer ATCC 11845 = DSM 15868 uba/thif-type nad/fad binding protein YP_004045854.1 1303851 D 693978 CDS YP_004045855.1 313206678 10001950 complement(1304600..1305358) 1 NC_014738.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: cpi:Cpin_5158 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, luxR family; transcriptional regulator, luxr family 1305358 10001950 Riean_1189 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, luxr family YP_004045855.1 1304600 R 693978 CDS YP_004045856.1 313206679 10001951 1305540..1305677 1 NC_014738.1 KEGG: gla:GL50803_94510 Tenascin-X precursor; hypothetical protein 1305677 10001951 Riean_1190 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045856.1 1305540 D 693978 CDS YP_004045857.1 313206680 10001952 1305753..1306334 1 NC_014738.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439: IPR003593; KEGG: pmo:Pmob_0368 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; ABC transporter 1306334 10001952 Riean_1191 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004045857.1 1305753 D 693978 CDS YP_004045858.1 313206681 10001953 1306321..1306980 1 NC_014738.1 KEGG: bcc:BCc_107 NADH dehydrogenase I chain L; SPTR: NADH dehydrogenase I chain L; hypothetical protein 1306980 10001953 Riean_1192 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045858.1 1306321 D 693978 CDS YP_004045859.1 313206682 10001954 1306983..1307762 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_00050 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1307762 10001954 Riean_1193 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045859.1 1306983 D 693978 CDS YP_004045860.1 313206683 10001955 complement(1307934..1308470) 1 NC_014738.1 KEGG: fba:FIC_02419 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1308470 10001955 Riean_1194 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045860.1 1307934 R 693978 CDS YP_004045861.1 313206684 10001956 1308685..1310034 1 NC_014738.1 InterPro IPR003088: IPR009056: IPR011031; KEGG: fba:FIC_02418 molybdopterin oxidoreductase subunit, predicted; chaperone protein HtpG; PFAM: cytochrome c class I; SPTR: Molybdopterin oxidoreductase subunit, predicted; chaperone protein HtpG; PFAM: Class III cytochrome C family; Cytochrome c; quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit 1310034 10001956 Riean_1195 Riemerella anatipestifer ATCC 11845 = DSM 15868 quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit YP_004045861.1 1308685 D 693978 CDS YP_004045862.1 313206685 10001957 1310059..1313109 1 NC_014738.1 COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311: IPR017896; KEGG: fba:FIC_02417 molybdopterin oxidoreductase, iron-sulfur binding subunit; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; quinol:cytochrome c oxidoreductase iron-sulfur protein 1313109 10001957 Riean_1196 Riemerella anatipestifer ATCC 11845 = DSM 15868 quinol:cytochrome c oxidoreductase iron-sulfur protein YP_004045862.1 1310059 D 693978 CDS YP_004045863.1 313206686 10001958 1313127..1314524 1 NC_014738.1 COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: fba:FIC_02416 molybdopterin oxidoreductase; PFAM: Polysulphide reductase NrfD; SPTR: Probable molybdopterin oxidoreductase; PFAM: Polysulphide reductase, NrfD; quinol:cytochrome c oxidoreductase quinone-binding subunit 1 1314524 10001958 Riean_1197 Riemerella anatipestifer ATCC 11845 = DSM 15868 quinol:cytochrome c oxidoreductase quinone-binding subunit 1 YP_004045863.1 1313127 D 693978 CDS YP_004045864.1 313206687 10001959 1314511..1315032 1 NC_014738.1 InterPro IPR001969; KEGG: fba:FIC_02415 ABC-type Fe3+ transport system protein; molybdenum transport protein, putative; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3341); quinol:cytochrome c oxidoreductase membrane protein 1315032 10001959 Riean_1198 Riemerella anatipestifer ATCC 11845 = DSM 15868 quinol:cytochrome c oxidoreductase membrane protein YP_004045864.1 1314511 D 693978 CDS YP_004045865.1 313206688 10001960 1315025..1315711 1 NC_014738.1 InterPro IPR009056; KEGG: fba:FIC_02414 hypothetical protein; SPTR: Cytochrome c family protein; PFAM: Cytochrome c; quinol:cytochrome c oxidoreductase monoheme cytochrome subunit 1315711 10001960 Riean_1199 Riemerella anatipestifer ATCC 11845 = DSM 15868 quinol:cytochrome c oxidoreductase monoheme cytochrome subunit YP_004045865.1 1315025 D 693978 CDS YP_004045866.1 313206689 10001961 1315726..1317057 1 NC_014738.1 KEGG: fba:FIC_02413 hypothetical protein; SPTR: Membrane protein; quinol:cytochrome c oxidoreductase quinone-binding subunit 2 1317057 10001961 Riean_1200 Riemerella anatipestifer ATCC 11845 = DSM 15868 quinol:cytochrome c oxidoreductase quinone-binding subunit 2 YP_004045866.1 1315726 D 693978 CDS YP_004045867.1 313206690 10001962 1317143..1318315 1 NC_014738.1 KEGG: fba:FIC_02412 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NTF2-like N-terminal transpeptidase domain; hypothetical protein 1318315 10001962 Riean_1201 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045867.1 1317143 D 693978 CDS YP_004045868.1 313206691 10001963 1318321..1318857 1 NC_014738.1 COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR000836: IPR005764; KEGG: fba:FIC_02411 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase 1318857 10001963 Riean_1202 Riemerella anatipestifer ATCC 11845 = DSM 15868 adenine phosphoribosyltransferase YP_004045868.1 1318321 D 693978 CDS YP_004045869.1 313206692 10001964 1318924..1319637 1 NC_014738.1 KEGG: fba:FIC_02410 TPR domain protein; SPTR: TPR domain protein; hypothetical protein 1319637 10001964 Riean_1203 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045869.1 1318924 D 693978 CDS YP_004045870.1 313206693 10001965 1319667..1320152 1 NC_014738.1 COGs: COG0054 Riboflavin synthase beta-chain; InterPro IPR002180; KEGG: fba:FIC_02409 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; PRIAM: Riboflavin synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 1320152 10001965 Riean_1204 Riemerella anatipestifer ATCC 11845 = DSM 15868 6,7-dimethyl-8-ribityllumazine synthase YP_004045870.1 1319667 D 693978 CDS YP_004045871.1 313206694 10001966 1320170..1321024 1 NC_014738.1 COGs: COG2321 metalloprotease; InterPro IPR007343; KEGG: fba:FIC_02406 neutral zinc metallopeptidase; PFAM: protein of unknown function zinc metallopeptidase; SPTR: Neutral zinc metallopeptidase; PFAM: Putative neutral zinc metallopeptidase; hypothetical protein 1321024 10001966 Riean_1205 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045871.1 1320170 D 693978 CDS YP_004045872.1 313206695 10001967 1321111..1321440 1 NC_014738.1 KEGG: dfe:Dfer_5657 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1321440 10001967 Riean_1206 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045872.1 1321111 D 693978 CDS YP_004045873.1 313206696 10001968 1321562..1322656 1 NC_014738.1 KEGG: fba:FIC_02446 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Acyltransferase family; hypothetical protein 1322656 10001968 Riean_1207 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045873.1 1321562 D 693978 CDS YP_004045874.1 313206697 10001969 1322712..1323356 1 NC_014738.1 KEGG: fba:FIC_02426 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1323356 10001969 Riean_1208 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045874.1 1322712 D 693978 CDS YP_004045875.1 313206698 10001970 1323379..1324122 1 NC_014738.1 COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: fba:FIC_02425 uroporphyrinogen-III synthase HemD, putative; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: Possible uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen-III synthase HemD; uroporphyrinogen-iii synthase 1324122 10001970 Riean_1209 Riemerella anatipestifer ATCC 11845 = DSM 15868 uroporphyrinogen-iii synthase YP_004045875.1 1323379 D 693978 CDS YP_004045876.1 313206699 10001971 1324214..1326262 1 NC_014738.1 COGs: COG1770 Protease II; InterPro IPR002470: IPR004106; KEGG: fba:FIC_02424 secreted peptidase, family S9; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; PRIAM: Oligopeptidase B; SPTR: Secreted peptidase, family S9; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; oligopeptidase b 1326262 10001971 Riean_1210 Riemerella anatipestifer ATCC 11845 = DSM 15868 oligopeptidase b YP_004045876.1 1324214 D 693978 CDS YP_004045877.1 313206700 10001972 1326534..1326770 1 NC_014738.1 COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: fba:FIC_02172 LSU ribosomal protein L28p; PFAM: ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein l28p 1326770 10001972 Riean_1211 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l28p YP_004045877.1 1326534 D 693978 CDS YP_004045878.1 313206701 10001973 1326781..1326963 1 NC_014738.1 InterPro IPR001705; KEGG: fba:FIC_02171 LSU ribosomal protein L33p; PFAM: ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein l33p 1326963 10001973 Riean_1212 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l33p YP_004045878.1 1326781 D 693978 CDS YP_004045879.1 313206702 10001974 1326986..1327135 1 NC_014738.1 KEGG: fba:FIC_02170 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1327135 10001974 Riean_1213 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045879.1 1326986 D 693978 CDS YP_004045880.1 313206703 10001975 1327236..1328192 1 NC_014738.1 COGs: COG0552 Signal recognition particle GTPase; InterPro IPR004390: IPR000897: IPR013822: IPR003593; KEGG: fba:FIC_02169 signal recognition particle receptor protein FtsY (=alpha subunit); PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; SPTR: Signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle-docking protein ftsy 1328192 10001975 Riean_1214 Riemerella anatipestifer ATCC 11845 = DSM 15868 signal recognition particle-docking protein ftsy YP_004045880.1 1327236 D 693978 CDS YP_004045881.1 313206704 10001976 1328233..1328487 1 NC_014738.1 InterPro IPR007341; KEGG: sen:SACE_4030 transglycosylase-associated protein; PFAM: Transglycosylase-associated protein; SPTR: Transglycosylase-associated protein; PFAM: Transglycosylase associated protein; transglycosylase-associated protein 1328487 10001976 Riean_1215 Riemerella anatipestifer ATCC 11845 = DSM 15868 transglycosylase-associated protein YP_004045881.1 1328233 D 693978 CDS YP_004045882.1 313206705 10001977 1328674..1331193 1 NC_014738.1 COGs: COG0550 Topoisomerase IA; InterPro IPR000380: IPR005733: IPR006171: IPR013497: IPR 006154: IPR003601: IPR003602; KEGG: fba:FIC_00182 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase i 1331193 10001977 Riean_1216 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA topoisomerase i YP_004045882.1 1328674 D 693978 CDS YP_004045883.1 313206706 10001978 1331205..1332269 1 NC_014738.1 InterPro IPR006035; KEGG: fba:FIC_00186 hypothetical protein; SPTR: Formiminoglutamase; PFAM: Arginase family; hypothetical protein 1332269 10001978 Riean_1217 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045883.1 1331205 D 693978 CDS YP_004045884.1 313206707 10001979 1332271..1333263 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fba:FIC_00188 beta-1,3-glucosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1333263 10001979 Riean_1218 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004045884.1 1332271 D 693978 CDS YP_004045885.1 313206708 10001980 1333273..1334397 1 NC_014738.1 KEGG: fba:FIC_00189 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1334397 10001980 Riean_1219 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045885.1 1333273 D 693978 CDS YP_004045886.1 313206709 10001982 1335550..1336449 1 NC_014738.1 KEGG: fba:FIC_00191 polysaccharide export outer membrane protein; SPTR: Polysaccharide export outer membrane protein; PFAM: Polysaccharide biosynthesis/export protein; gliding motility protein epsa 1336449 10001982 Riean_1221 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein epsa YP_004045886.1 1335550 D 693978 CDS YP_004045887.1 313206710 10001983 1336452..1338962 1 NC_014738.1 COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: fba:FIC_00192 tyrosine-protein kinase wzc; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Tyrosine-protein kinase involved in exopolysaccharide biosynthesis; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; gliding motility protein epsb 1338962 10001983 Riean_1222 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein epsb YP_004045887.1 1336452 D 693978 CDS YP_004045888.1 313206711 10001984 1339050..1341641 1 NC_014738.1 COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR005748: IPR000432: IPR000408: IPR007695: IPR 007860: IPR007696: IPR007861; KEGG: fba:FIC_02388 DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein muts 1341641 10001984 Riean_1223 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA mismatch repair protein muts YP_004045888.1 1339050 D 693978 CDS YP_004045889.1 313206712 10001986 1342916..1343632 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fba:FIC_02427 dolichol-phosphate mannosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Possible dolichyl-phosphate beta-D-mannosyltransferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1343632 10001986 Riean_1225 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004045889.1 1342916 D 693978 CDS YP_004045890.1 313206713 10001987 1343629..1344027 1 NC_014738.1 KEGG: fba:FIC_02428 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1344027 10001987 Riean_1226 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045890.1 1343629 D 693978 CDS YP_004045891.1 313206714 10001988 1344002..1345171 1 NC_014738.1 COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; InterPro IPR004803: IPR002616: IPR005829; KEGG: fba:FIC_02429 tRNA-guanine transglycosylase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase 1345171 10001988 Riean_1227 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA-guanine transglycosylase YP_004045891.1 1344002 D 693978 CDS YP_004045892.1 313206715 10001989 1345372..1346466 1 NC_014738.1 COGs: COG0795 permease; InterPro IPR005495; KEGG: fba:FIC_02430 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Membrane protein, putative; PFAM: Predicted permease YjgP/YjgQ family; permease yjgp/yjgq family protein 1346466 10001989 Riean_1228 Riemerella anatipestifer ATCC 11845 = DSM 15868 permease yjgp/yjgq family protein YP_004045892.1 1345372 D 693978 CDS YP_004045893.1 313206716 10001990 complement(1346460..1347170) 1 NC_014738.1 COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004408: IPR004143; KEGG: fba:FIC_02431 biotin-protein ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: Biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--acetyl-CoA-carboxylase ligase 1347170 10001990 Riean_1229 Riemerella anatipestifer ATCC 11845 = DSM 15868 biotin--acetyl-CoA-carboxylase ligase YP_004045893.1 1346460 R 693978 CDS YP_004045894.1 313206717 10001991 1347246..1347614 1 NC_014738.1 COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: fba:FIC_02432 iojap family protein; PFAM: Iojap-related protein; SPTR: Iojap family protein; TIGRFAM: iojap-like protein; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; iojap family protein 1347614 10001991 Riean_1230 Riemerella anatipestifer ATCC 11845 = DSM 15868 iojap family protein YP_004045894.1 1347246 D 693978 CDS YP_004045895.1 313206718 10001992 1347630..1349606 1 NC_014738.1 COGs: COG0465 ATP-dependent Zn protease; InterPro IPR005936: IPR003959: IPR000642: IPR003593: IPR 003960; KEGG: fba:FIC_02433 cell division protein FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: Cell division protein ftsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; ATP-dependent metalloprotease ftsh 1349606 10001992 Riean_1231 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-dependent metalloprotease ftsh YP_004045895.1 1347630 D 693978 CDS YP_004045896.1 313206719 10001993 complement(1349674..1350975) 1 NC_014738.1 COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: fba:FIC_00888 methionine transporter MetT; PFAM: Na+/H+ antiporter NhaC-like; SPTR: Methionine transporter MetT; PFAM: Na+/H+ antiporter family; TC 2.A.35; transporter, nhac family 1350975 10001993 Riean_1232 Riemerella anatipestifer ATCC 11845 = DSM 15868 transporter, nhac family YP_004045896.1 1349674 R 693978 CDS YP_004045897.1 313206720 10001994 complement(1351273..1352079) 1 NC_014738.1 KEGG: pfa:PF14_0140 conserved Plasmodium protein, unknown function; SPTR: Possible conserved carbohydrate-binding protein; hypothetical protein 1352079 10001994 Riean_1233 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045897.1 1351273 R 693978 CDS YP_004045898.1 313206721 10001995 complement(1352192..1352551) 1 NC_014738.1 KEGG: pgi:PG1454 integrase; SPTR: Tyrosine type site-specific recombinase; hypothetical protein 1352551 10001995 Riean_1234 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045898.1 1352192 R 693978 CDS YP_004045899.1 313206722 10001996 complement(1352838..1353269) 1 NC_014738.1 KEGG: tva:TVAG_003690 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1353269 10001996 Riean_1235 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045899.1 1352838 R 693978 CDS YP_004045900.1 313206723 10001997 complement(1353339..1353620) 1 NC_014738.1 KEGG: gfo:GFO_2605 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1353620 10001997 Riean_1236 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045900.1 1353339 R 693978 CDS YP_004045901.1 313206724 10001998 complement(1353638..1354027) 1 NC_014738.1 KEGG: lme:LEUM_0807 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1354027 10001998 Riean_1237 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045901.1 1353638 R 693978 CDS YP_004045902.1 313206725 10001999 complement(1354075..1354971) 1 NC_014738.1 KEGG: coc:Coch_0676 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1354971 10001999 Riean_1238 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045902.1 1354075 R 693978 CDS YP_004045903.1 313206726 10002000 complement(1355023..1356126) 1 NC_014738.1 KEGG: rbi:RB2501_07155 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1356126 10002000 Riean_1239 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045903.1 1355023 R 693978 CDS YP_004045904.1 313206727 10002001 1356212..1356439 1 NC_014738.1 InterPro IPR001387; KEGG: chu:CHU_0810 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 1356439 10002001 Riean_1240 Riemerella anatipestifer ATCC 11845 = DSM 15868 helix-turn-helix domain-containing protein YP_004045904.1 1356212 D 693978 CDS YP_004045905.1 313206728 10002002 complement(1356699..1357085) 1 NC_014738.1 KEGG: rbi:RB2501_07085 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1357085 10002002 Riean_1241 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045905.1 1356699 R 693978 CDS YP_004045906.1 313206729 10002003 1357639..1360683 1 NC_014738.1 InterPro IPR002296: IPR002052; KEGG: bfs:BF1252 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1360683 10002003 Riean_1242 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045906.1 1357639 D 693978 CDS YP_004045907.1 313206730 10002004 1360686..1361327 1 NC_014738.1 KEGG: bfs:BF1251 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1361327 10002004 Riean_1243 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045907.1 1360686 D 693978 CDS YP_004045908.1 313206731 10002005 complement(1361335..1362540) 1 NC_014738.1 KEGG: bfr:BF3462 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1362540 10002005 Riean_1244 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045908.1 1361335 R 693978 CDS YP_004045909.1 313206732 10002006 complement(1362518..1363405) 1 NC_014738.1 InterPro IPR003593; KEGG: nwa:Nwat_3151 AAA ATPase; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; AAA ATPase 1363405 10002006 Riean_1245 Riemerella anatipestifer ATCC 11845 = DSM 15868 AAA ATPase YP_004045909.1 1362518 R 693978 CDS YP_004045910.1 313206733 10002007 complement(1363843..1366479) 1 NC_014738.1 KEGG: pbe:PB000072.03.0 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Type III restriction enzyme, res subunit; hypothetical protein 1366479 10002007 Riean_1246 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045910.1 1363843 R 693978 CDS YP_004045911.1 313206734 10002008 complement(1366530..1367738) 1 NC_014738.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: gfo:GFO_0671 phage integrase family protein; PFAM: integrase family protein; SPTR: Tyrosine type site-specific recombinase; PFAM: Phage integrase family; integrase family protein 1367738 10002008 Riean_1247 Riemerella anatipestifer ATCC 11845 = DSM 15868 integrase family protein YP_004045911.1 1366530 R 693978 CDS YP_004045912.1 313206735 10002010 complement(1368072..1369475) 1 NC_014738.1 COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478: IPR004387: IPR008915; KEGG: fba:FIC_00095 membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SPTR: Membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; membrane-associated zinc metalloprotease 1369475 10002010 Riean_1248 Riemerella anatipestifer ATCC 11845 = DSM 15868 membrane-associated zinc metalloprotease YP_004045912.1 1368072 R 693978 CDS YP_004045913.1 313206736 10002011 complement(1369510..1369938) 1 NC_014738.1 KEGG: fba:FIC_00094 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1369938 10002011 Riean_1249 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045913.1 1369510 R 693978 CDS YP_004045914.1 313206737 10002012 1370019..1370780 1 NC_014738.1 COGs: COG0388 amidohydrolase; InterPro IPR003010: IPR001110; KEGG: fba:FIC_00093 hydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Aminohydrolase; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase 1370780 10002012 Riean_1250 Riemerella anatipestifer ATCC 11845 = DSM 15868 nitrilase/cyanide hydratase and apolipoprotein n-acyltransferase YP_004045914.1 1370019 D 693978 CDS YP_004045915.1 313206738 10002013 complement(1370844..1371890) 1 NC_014738.1 KEGG: cef:CE0721 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1371890 10002013 Riean_1251 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045915.1 1370844 R 693978 CDS YP_004045916.1 313206739 10002014 1371999..1374035 1 NC_014738.1 COGs: COG0556 Helicase subunit of the DNA excision repair complex; InterPro IPR001943: IPR014021: IPR001650: IPR004807: IPR 006935: IPR014001; KEGG: fba:FIC_02492 excinuclease ABC subunit B; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: UvrABC system protein B; TIGRFAM: excinuclease ABC, B subunit; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; excinuclease ABC, b subunit 1374035 10002014 Riean_1252 Riemerella anatipestifer ATCC 11845 = DSM 15868 excinuclease ABC, b subunit YP_004045916.1 1371999 D 693978 CDS YP_004045917.1 313206740 10002015 1374061..1374585 1 NC_014738.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fjo:Fjoh_3131 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; transcriptional regulator, crp/fnr family 1374585 10002015 Riean_1253 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, crp/fnr family YP_004045917.1 1374061 D 693978 CDS YP_004045918.1 313206741 10002016 1374635..1375186 1 NC_014738.1 KEGG: fjo:Fjoh_3132 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1375186 10002016 Riean_1254 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045918.1 1374635 D 693978 CDS YP_004045919.1 313206742 10002017 1375402..1375614 1 NC_014738.1 KEGG: sli:Slin_6287 RagB/SusD domain protein; SPTR: RagB/SusD domain protein; hypothetical protein 1375614 10002017 Riean_1255 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045919.1 1375402 D 693978 CDS YP_004045920.1 313206743 10002018 1375734..1376969 1 NC_014738.1 COGs: COG2067 Long-chain fatty acid transport protein; InterPro IPR005017; KEGG: fba:FIC_02550 outer membrane protein P1, putative; PFAM: membrane protein involved in aromatic hydrocarbon degradation; SPTR: Outer membrane protein P1, putative; PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX); aromatic hydrocarbon degradation membrane protein 1376969 10002018 Riean_1256 Riemerella anatipestifer ATCC 11845 = DSM 15868 aromatic hydrocarbon degradation membrane protein YP_004045920.1 1375734 D 693978 CDS YP_004045921.1 313206744 10002019 1376982..1378442 1 NC_014738.1 InterPro IPR001087; KEGG: fba:FIC_02549 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: Probable outer membrane protein; lipolytic protein g-D-s-l family 1378442 10002019 Riean_1257 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipolytic protein g-D-s-l family YP_004045921.1 1376982 D 693978 CDS YP_004045922.1 313206745 10002020 1378532..1379470 1 NC_014738.1 COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946: IPR000836: IPR000842; KEGG: fba:FIC_02548 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 1379470 10002020 Riean_1258 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribose-phosphate pyrophosphokinase YP_004045922.1 1378532 D 693978 CDS YP_004045923.1 313206746 10002021 1379527..1380135 1 NC_014738.1 COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); InterPro IPR001021: IPR020055; KEGG: fba:FIC_02547 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25-like; SPTR: 50S ribosomal protein L25; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; 50S ribosomal protein l25p 1380135 10002021 Riean_1259 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l25p YP_004045923.1 1379527 D 693978 CDS YP_004045924.1 313206747 10002022 1380216..1380794 1 NC_014738.1 KEGG: fba:FIC_02520 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SprT-like family; hypothetical protein 1380794 10002022 Riean_1260 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045924.1 1380216 D 693978 CDS YP_004045925.1 313206748 10002023 1380808..1381896 1 NC_014738.1 COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835; KEGG: fba:FIC_02521 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase (gdp) 1381896 10002023 Riean_1261 Riemerella anatipestifer ATCC 11845 = DSM 15868 mannose-1-phosphate guanylyltransferase (gdp) YP_004045925.1 1380808 D 693978 CDS YP_004045926.1 313206749 10002024 1381940..1383472 1 NC_014738.1 COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482: IPR001208: IPR000523: IPR003593; KEGG: fba:FIC_00029 MG(2+) chelatase family protein / ComM-related protein; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; SPTR: ATPase; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein; mg chelatase, subunit chli 1383472 10002024 Riean_1262 Riemerella anatipestifer ATCC 11845 = DSM 15868 mg chelatase, subunit chli YP_004045926.1 1381940 D 693978 CDS YP_004045927.1 313206750 10002025 1383488..1384279 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_02022 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1384279 10002025 Riean_1263 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045927.1 1383488 D 693978 CDS YP_004045928.1 313206751 10002026 1384497..1385087 1 NC_014738.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: fba:FIC_00172 RNA polymerase sigma-70 factor, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-70 factor 1385087 10002026 Riean_1264 Riemerella anatipestifer ATCC 11845 = DSM 15868 ECF subfamily RNA polymerase sigma-70 factor YP_004045928.1 1384497 D 693978 CDS YP_004045929.1 313206752 10002027 1385285..1385980 1 NC_014738.1 COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006439: IPR005834; KEGG: fba:FIC_00174 2-haloalkanoic acid dehalogenase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: 2-haloalkanoic acid dehalogenase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254; haD-superfamily hydrolase, subfamily ia, variant 1 1385980 10002027 Riean_1265 Riemerella anatipestifer ATCC 11845 = DSM 15868 haD-superfamily hydrolase, subfamily ia, variant 1 YP_004045929.1 1385285 D 693978 CDS YP_004045930.1 313206753 10002028 1386078..1387046 1 NC_014738.1 COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002306: IPR002305; KEGG: fba:FIC_00175 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophan--tRNA ligase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 1387046 10002028 Riean_1266 Riemerella anatipestifer ATCC 11845 = DSM 15868 tryptophanyl-tRNA synthetase YP_004045930.1 1386078 D 693978 CDS YP_004045931.1 313206754 10002029 1387104..1387790 1 NC_014738.1 KEGG: fba:FIC_00003 hypothetical protein; SPTR: LysE type amino acid translocator; PFAM: LysE type translocator; hypothetical protein 1387790 10002029 Riean_1267 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045931.1 1387104 D 693978 CDS YP_004045932.1 313206755 10002030 1387797..1388726 1 NC_014738.1 COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: fba:FIC_00004 muramoyltetrapeptide carboxypeptidase; PFAM: peptidase U61 LD-carboxypeptidase A; SPTR: Possible U61 family carboxypeptidase; PFAM: LD-carboxypeptidase; peptidase u61 lD-carboxypeptidase a 1388726 10002030 Riean_1268 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase u61 lD-carboxypeptidase a YP_004045932.1 1387797 D 693978 CDS YP_004045933.1 313206756 10002031 1388730..1389098 1 NC_014738.1 COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR003509; KEGG: fba:FIC_00006 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein HMPREF0204_4709; PFAM: Uncharacterised protein family UPF0102; TIGRFAM: conserved hypothetical protein TIGR00252; hypothetical protein 1389098 10002031 Riean_1269 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045933.1 1388730 D 693978 CDS YP_004045934.1 313206757 10002032 1389207..1389866 1 NC_014738.1 KEGG: fba:FIC_02558 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1389866 10002032 Riean_1270 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045934.1 1389207 D 693978 CDS YP_004045935.1 313206758 10002033 1389924..1390949 1 NC_014738.1 COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: fba:FIC_02565 two-component system sensor protein histidine kinase; PFAM: histidine kinase internal region; SPTR: Putative two-component system sensor protein histidine kinase; PFAM: Histidine kinase; signal transduction histidine kinase, lyts 1390949 10002033 Riean_1271 Riemerella anatipestifer ATCC 11845 = DSM 15868 signal transduction histidine kinase, lyts YP_004045935.1 1389924 D 693978 CDS YP_004045936.1 313206759 10002034 1390960..1391706 1 NC_014738.1 COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: fba:FIC_02562 two-component system response regulator; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator LytR; PFAM: Response regulator receiver domain; LytTr DNA-binding domain; two component transcriptional regulator, lyttr family 1391706 10002034 Riean_1272 Riemerella anatipestifer ATCC 11845 = DSM 15868 two component transcriptional regulator, lyttr family YP_004045936.1 1390960 D 693978 CDS YP_004045937.1 313206760 10002035 complement(1391703..1392068) 1 NC_014738.1 COGs: COG3296 conserved hypothetical protein; KEGG: zpr:ZPR_1830 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1392068 10002035 Riean_1273 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045937.1 1391703 R 693978 CDS YP_004045938.1 313206761 10002036 complement(1392171..1392836) 1 NC_014738.1 COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: fba:FIC_00104 probable lipoprotein; PFAM: NLP/P60 protein; SPTR: Possible lipoprotein; PFAM: NlpC/P60 family; nlp/p60 protein 1392836 10002036 Riean_1274 Riemerella anatipestifer ATCC 11845 = DSM 15868 nlp/p60 protein YP_004045938.1 1392171 R 693978 CDS YP_004045939.1 313206762 10002037 complement(1393065..1395260) 1 NC_014738.1 COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: fba:FIC_00105 glutamine synthetase type III, GlnN; PFAM: glutamine synthetase catalytic region; SPTR: Glutamate--ammonia ligase; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; glutamine synthetase 1395260 10002037 Riean_1275 Riemerella anatipestifer ATCC 11845 = DSM 15868 glutamine synthetase YP_004045939.1 1393065 R 693978 CDS YP_004045940.1 313206763 10002038 complement(1395358..1396467) 1 NC_014738.1 KEGG: fba:FIC_00028 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3078); hypothetical protein 1396467 10002038 Riean_1276 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045940.1 1395358 R 693978 CDS YP_004045941.1 313206764 10002039 1396616..1397338 1 NC_014738.1 InterPro IPR002610; KEGG: fba:FIC_00027 hypothetical protein; PFAM: Rhomboid family protein; SPTR: Putative uncharacterized protein; PFAM: Rhomboid family; rhomboid family protein 1397338 10002039 Riean_1277 Riemerella anatipestifer ATCC 11845 = DSM 15868 rhomboid family protein YP_004045941.1 1396616 D 693978 CDS YP_004045942.1 313206765 10002040 complement(1397342..1397812) 1 NC_014738.1 InterPro IPR015018; KEGG: cpi:Cpin_0330 hypothetical protein; PFAM: Domain of unknown function DUF1905; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1905); hypothetical protein 1397812 10002040 Riean_1278 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045942.1 1397342 R 693978 CDS YP_004045943.1 313206766 10002042 complement(1398049..1398234) 1 NC_014738.1 KEGG: tne:Tneu_1123 hypothetical protein; SPTR: Polysaccharide biosynthesis protein; hypothetical protein 1398234 10002042 Riean_1280 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045943.1 1398049 R 693978 CDS YP_004045944.1 313206767 10002043 complement(1398544..1399272) 1 NC_014738.1 COGs: COG2375 Siderophore-interacting protein; InterPro IPR017927: IPR008333; KEGG: fjo:Fjoh_4029 oxidoreductase FAD-binding subunit; PFAM: Oxidoreductase FAD-binding domain protein; SPTR: Putative iron transport/utilisation related protein; PFAM: Oxidoreductase FAD-binding domain; oxidoreductase faD-binding domain-containing protein 1399272 10002043 Riean_1281 Riemerella anatipestifer ATCC 11845 = DSM 15868 oxidoreductase faD-binding domain-containing protein YP_004045944.1 1398544 R 693978 CDS YP_004045945.1 313206768 10002044 complement(1399574..1400281) 1 NC_014738.1 COGs: COG4912 DNA alkylation repair protein; InterPro IPR014825; KEGG: fba:FIC_00018 predicted DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme; SPTR: Predicted DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme; DNA alkylation repair protein 1400281 10002044 Riean_1282 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA alkylation repair protein YP_004045945.1 1399574 R 693978 CDS YP_004045946.1 313206769 10002045 1400326..1400724 1 NC_014738.1 KEGG: fjo:Fjoh_0188 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1400724 10002045 Riean_1283 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045946.1 1400326 D 693978 CDS YP_004045947.1 313206770 10002046 1400829..1403195 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR006121: IPR000531; KEGG: fba:FIC_00049 probable Co/Zn/Cd efflux system membrane fusion protein; PFAM: TonB-dependent receptor; SPTR: Probable Co/Zn/Cd efflux system membrane fusion protein; PFAM: TonB dependent receptor; Heavy-metal-associated domain; tonb-dependent receptor 1403195 10002046 Riean_1284 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004045947.1 1400829 D 693978 CDS YP_004045948.1 313206771 10002047 complement(1403279..1406584) 1 NC_014738.1 KEGG: fba:FIC_02363 OmpA-related protein; SPTR: OmpA-related protein; ompa-related protein 1406584 10002047 Riean_1285 Riemerella anatipestifer ATCC 11845 = DSM 15868 ompa-related protein YP_004045948.1 1403279 R 693978 CDS YP_004045949.1 313206772 10002048 complement(1406869..1409475) 1 NC_014738.1 InterPro IPR012910: IPR000531: IPR010917; KEGG: coc:Coch_1487 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor, plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor 1409475 10002048 Riean_1286 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004045949.1 1406869 R 693978 CDS YP_004045950.1 313206773 10002049 complement(1409828..1410493) 1 NC_014738.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: fba:FIC_02359 oxygen-insensitive NAD(P)H nitroreductase; PFAM: nitroreductase; SPTR: Oxygen-insensitive NAD(P)H nitroreductase; PFAM: Nitroreductase family; nitroreductase 1410493 10002049 Riean_1287 Riemerella anatipestifer ATCC 11845 = DSM 15868 nitroreductase YP_004045950.1 1409828 R 693978 CDS YP_004045951.1 313206774 10002050 1410546..1412156 1 NC_014738.1 COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: fba:FIC_02248 hypothetical protein; PFAM: surface antigen (D15); SPTR: Putative uncharacterized protein; surface antigen (d15) 1412156 10002050 Riean_1288 Riemerella anatipestifer ATCC 11845 = DSM 15868 surface antigen (d15) YP_004045951.1 1410546 D 693978 CDS YP_004045952.1 313206775 10002051 1412285..1413049 1 NC_014738.1 InterPro IPR010902: IPR002711; KEGG: fps:FP0872 endonuclease; PFAM: NUMOD4 domain protein; HNH endonuclease; SPTR: Prophage LambdaSa2, HNH endonuclease family protein; PFAM: NUMOD4 motif; numod4 domain-containing protein 1413049 10002051 Riean_1289 Riemerella anatipestifer ATCC 11845 = DSM 15868 numod4 domain-containing protein YP_004045952.1 1412285 D 693978 CDS YP_004045953.1 313206776 10002052 complement(1413115..1414335) 1 NC_014738.1 COGs: COG2262 GTPase; InterPro IPR016496: IPR005225: IPR006073: IPR002917; KEGG: fba:FIC_00017 GTP-binding protein HflX; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein HflX-like protein; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain; GTP-binding protein hflx 1414335 10002052 Riean_1290 Riemerella anatipestifer ATCC 11845 = DSM 15868 GTP-binding protein hflx YP_004045953.1 1413115 R 693978 CDS YP_004045954.1 313206777 10002053 complement(1414352..1415539) 1 NC_014738.1 COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR004506; KEGG: fba:FIC_02560 tRNA-specific 2-thiouridylase MnmA; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 1415539 10002053 Riean_1291 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_004045954.1 1414352 R 693978 CDS YP_004045955.1 313206778 10002054 1415686..1416222 1 NC_014738.1 KEGG: fba:FIC_02559 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1416222 10002054 Riean_1292 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045955.1 1415686 D 693978 CDS YP_004045956.1 313206779 10002055 1416318..1416569 1 NC_014738.1 InterPro IPR007167; KEGG: fba:FIC_02531 hypothetical protein; PFAM: FeoA family protein; SPTR: Putative uncharacterized protein; PFAM: FeoA domain; feoa family protein 1416569 10002055 Riean_1293 Riemerella anatipestifer ATCC 11845 = DSM 15868 feoa family protein YP_004045956.1 1416318 D 693978 CDS YP_004045957.1 313206780 10002056 1416605..1418641 1 NC_014738.1 COGs: COG0370 Fe2+ transport system protein B; InterPro IPR005225: IPR003373: IPR006073: IPR002917: IPR 011619: IPR011642: IPR011640; KEGG: fba:FIC_02530 ferrous iron transport protein B; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; SPTR: Ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; ferrous iron transport protein b 1418641 10002056 Riean_1294 Riemerella anatipestifer ATCC 11845 = DSM 15868 ferrous iron transport protein b YP_004045957.1 1416605 D 693978 CDS YP_004045958.1 313206781 10002057 complement(1418913..1419596) 1 NC_014738.1 COGs: COG2360 Leu/Phe-tRNA-protein transferase; InterPro IPR004616; KEGG: fba:FIC_02501 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; PRIAM: Leucyltransferase; SPTR: Leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 1419596 10002057 Riean_1295 Riemerella anatipestifer ATCC 11845 = DSM 15868 leucyl/phenylalanyl-tRNA/protein transferase YP_004045958.1 1418913 R 693978 CDS YP_004045959.1 313206782 10002058 complement(1419669..1420049) 1 NC_014738.1 KEGG: fba:FIC_02502 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3127); hypothetical protein 1420049 10002058 Riean_1296 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045959.1 1419669 R 693978 CDS YP_004045960.1 313206783 10002062 1420689..1422311 1 NC_014738.1 InterPro IPR005151; KEGG: fps:FP1003 hypothetical protein; PFAM: peptidase S41; SMART: peptidase S41; SPTR: Putative uncharacterized protein; PFAM: Peptidase family S41; peptidase s41 1422311 10002062 Riean_1297 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase s41 YP_004045960.1 1420689 D 693978 CDS YP_004045961.1 313206784 10002065 complement(1422561..1423808) 1 NC_014738.1 COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR001645: IPR013221: IPR022272: IPR018109; KEGG: fba:FIC_00042 dihydrofolate synthase; PFAM: Mur ligase middle domain protein; PRIAM: Tetrahydrofolate synthase; SPTR: Possible tetrahydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1423808 10002065 Riean_1298 Riemerella anatipestifer ATCC 11845 = DSM 15868 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_004045961.1 1422561 R 693978 CDS YP_004045962.1 313206785 10002066 1423871..1425025 1 NC_014738.1 KEGG: pmu:PM1082 hypothetical protein; SPTR: Uncharacterized protein PM1082; hypothetical protein 1425025 10002066 Riean_1299 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045962.1 1423871 D 693978 CDS YP_004045963.1 313206786 10002067 1425248..1425715 1 NC_014738.1 InterPro IPR020790: IPR003728; KEGG: fba:FIC_02321 hypothetical protein; PFAM: protein of unknown function DUF150; SPTR: Ribosome maturation factor rimP; PFAM: Uncharacterised BCR, YhbC family COG0779; hypothetical protein 1425715 10002067 Riean_1300 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045963.1 1425248 D 693978 CDS YP_004045964.1 313206787 10002068 1425760..1426995 1 NC_014738.1 COGs: COG0195 Transcription elongation factor; InterPro IPR010213: IPR013735; KEGG: fba:FIC_02320 transcription elongation factor NusA; PFAM: NusA domain-containing protein; SPTR: Transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA; nusa antitermination factor 1426995 10002068 Riean_1301 Riemerella anatipestifer ATCC 11845 = DSM 15868 nusa antitermination factor YP_004045964.1 1425760 D 693978 CDS YP_004045965.1 313206788 10002069 1427111..1429915 1 NC_014738.1 COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterPro IPR000178: IPR005225: IPR006847: IPR000795: IPR 004161; KEGG: fba:FIC_02319 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein; SPTR: Translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor 2 (bif-2) 1429915 10002069 Riean_1302 Riemerella anatipestifer ATCC 11845 = DSM 15868 translation initiation factor 2 (bif-2) YP_004045965.1 1427111 D 693978 CDS YP_004045966.1 313206789 10002070 1430225..1433167 1 NC_014738.1 InterPro IPR012910: IPR000531; KEGG: bvu:BVU_1847 hypothetical protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Probable outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor plug 1433167 10002070 Riean_1303 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004045966.1 1430225 D 693978 CDS YP_004045967.1 313206790 10002071 1433196..1434632 1 NC_014738.1 InterPro IPR012944; KEGG: bvu:BVU_1853 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Probable outer membrane protein; PFAM: SusD family; ragb/susd domain-containing protein 1434632 10002071 Riean_1304 Riemerella anatipestifer ATCC 11845 = DSM 15868 ragb/susd domain-containing protein YP_004045967.1 1433196 D 693978 CDS YP_004045968.1 313206791 10002072 1434740..1436641 1 NC_014738.1 KEGG: fba:FIC_02312 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1436641 10002072 Riean_1305 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045968.1 1434740 D 693978 CDS YP_004045969.1 313206792 10002073 1436651..1438231 1 NC_014738.1 COGs: COG4365 conserved hypothetical protein; InterPro IPR011199; KEGG: fba:FIC_02311 hypothetical protein; PFAM: protein of unknown function UCP012535; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2317); hypothetical protein 1438231 10002073 Riean_1306 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045969.1 1436651 D 693978 CDS YP_004045970.1 313206793 10002074 1438269..1440164 1 NC_014738.1 InterPro IPR018392: IPR002482; KEGG: fba:FIC_02310 LysM-repeat protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Possible LysM-repeat protein; PFAM: LysM domain; amino acid/amide ABC transporter substrate-binding protein, haat family 1440164 10002074 Riean_1307 Riemerella anatipestifer ATCC 11845 = DSM 15868 amino acid/amide ABC transporter substrate-binding protein, haat family YP_004045970.1 1438269 D 693978 CDS YP_004045971.1 313206794 10002075 1440208..1441083 1 NC_014738.1 COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410: IPR014043; KEGG: fba:FIC_02309 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; SPTR: [acyl-carrier-protein] S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1441083 10002075 Riean_1308 Riemerella anatipestifer ATCC 11845 = DSM 15868 malonyl CoA-acyl carrier protein transacylase YP_004045971.1 1440208 D 693978 CDS YP_004045972.1 313206795 10002076 complement(1441161..1441460) 1 NC_014738.1 COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR017936: IPR006662: IPR013766; KEGG: fba:FIC_00092 thioredoxin C-2; PFAM: Thioredoxin domain-containing protein; SPTR: Possible thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 1441460 10002076 Riean_1309 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioredoxin YP_004045972.1 1441161 R 693978 CDS YP_004045973.1 313206796 10002077 complement(1441466..1441777) 1 NC_014738.1 COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: fps:FP1814 rhodanese-like domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Beta-lactamase-like protein; PFAM: Rhodanese-like domain; rhodanese domain-containing protein 1441777 10002077 Riean_1310 Riemerella anatipestifer ATCC 11845 = DSM 15868 rhodanese domain-containing protein YP_004045973.1 1441466 R 693978 CDS YP_004045974.1 313206797 10002078 complement(1441907..1442701) 1 NC_014738.1 KEGG: lla:L0252 subunit B of ATP-dependent exonuclease; SPTR: Putative uncharacterized protein; hypothetical protein 1442701 10002078 Riean_1311 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045974.1 1441907 R 693978 CDS YP_004045975.1 313206798 10002079 complement(1442698..1443111) 1 NC_014738.1 COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: pgi:PG1570 rhodanese-like domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Rhodanese family domain protein; PFAM: Rhodanese-like domain; rhodanese domain-containing protein 1443111 10002079 Riean_1312 Riemerella anatipestifer ATCC 11845 = DSM 15868 rhodanese domain-containing protein YP_004045975.1 1442698 R 693978 CDS YP_004045976.1 313206799 10002080 complement(1443115..1444521) 1 NC_014738.1 COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: fba:FIC_00090 metallo-beta-lactamase superfamily protein; SMART: Rhodanese domain protein; SPTR: Metallo-beta-lactamase superfamily protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; rhodanese domain-containing protein 1444521 10002080 Riean_1313 Riemerella anatipestifer ATCC 11845 = DSM 15868 rhodanese domain-containing protein YP_004045976.1 1443115 R 693978 CDS YP_004045977.1 313206800 10002081 complement(1444535..1445329) 1 NC_014738.1 InterPro IPR002781; KEGG: fba:FIC_00088 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Conserved hypothetical transmembrane protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 1445329 10002081 Riean_1314 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045977.1 1444535 R 693978 CDS YP_004045978.1 313206801 10002082 complement(1445402..1445845) 1 NC_014738.1 KEGG: zpr:ZPR_2598 transcription elongation factor; SPTR: Transcription elongation factor; hypothetical protein 1445845 10002082 Riean_1315 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045978.1 1445402 R 693978 CDS YP_004045979.1 313206802 10002083 1445991..1447541 1 NC_014738.1 COGs: COG0433 ATPase; InterPro IPR008571; KEGG: fba:FIC_00087 hypothetical protein; PFAM: protein of unknown function DUF853 NPT hydrolase; SPTR: ATPase; PFAM: Bacterial protein of unknown function (DUF853); hypothetical protein 1447541 10002083 Riean_1316 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045979.1 1445991 D 693978 CDS YP_004045980.1 313206803 10002084 1447694..1448917 1 NC_014738.1 COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006054: IPR013520: IPR006055; KEGG: fba:FIC_00086 DNA polymerase III epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III subunit epsilon 1448917 10002084 Riean_1317 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA polymerase III subunit epsilon YP_004045980.1 1447694 D 693978 CDS YP_004045981.1 313206804 10002085 1448962..1450611 1 NC_014738.1 COGs: COG0497 ATPase involved in DNA repair; InterPro IPR004604: IPR003395; KEGG: fba:FIC_00065 DNA repair protein RecN; PFAM: SMC domain protein; SPTR: DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA replication and repair protein recn 1450611 10002085 Riean_1318 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA replication and repair protein recn YP_004045981.1 1448962 D 693978 CDS YP_004045982.1 313206805 10002086 1450682..1451545 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_02532 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1451545 10002086 Riean_1319 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045982.1 1450682 D 693978 CDS YP_004045983.1 313206806 10002087 complement(1451562..1452182) 1 NC_014738.1 COGs: COG2928 conserved hypothetical protein; InterPro IPR007462; KEGG: fba:FIC_02449 hypothetical membrane protein; PFAM: protein of unknown function DUF502; SPTR: Hypothetical membrane protein; PFAM: Protein of unknown function (DUF502); hypothetical protein 1452182 10002087 Riean_1320 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045983.1 1451562 R 693978 CDS YP_004045984.1 313206807 10002088 complement(1452175..1453272) 1 NC_014738.1 COGs: COG0502 Biotin synthase; InterPro IPR002684: IPR007197: IPR010722: IPR006638; KEGG: cat:CA2559_02695 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; biotin synthase 1453272 10002088 Riean_1321 Riemerella anatipestifer ATCC 11845 = DSM 15868 biotin synthase YP_004045984.1 1452175 R 693978 CDS YP_004045985.1 313206808 10002089 1453451..1454308 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_00050 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1454308 10002089 Riean_1322 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045985.1 1453451 D 693978 CDS YP_004045986.1 313206809 10002090 complement(1454369..1455421) 1 NC_014738.1 COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR006283: IPR000728; KEGG: fba:FIC_02443 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; PRIAM: Thiamine-phosphate kinase; SPTR: Thiamine-phosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase; thiamine-phosphate kinase 1455421 10002090 Riean_1323 Riemerella anatipestifer ATCC 11845 = DSM 15868 thiamine-phosphate kinase YP_004045986.1 1454369 R 693978 CDS YP_004045987.1 313206810 10002091 complement(1455437..1455934) 1 NC_014738.1 COGs: COG0824 thioesterase; KEGG: fba:FIC_02442 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Acyl-ACP thioesterase; hypothetical protein 1455934 10002091 Riean_1324 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045987.1 1455437 R 693978 CDS YP_004045988.1 313206811 10002092 complement(1456038..1457777) 1 NC_014738.1 KEGG: fba:FIC_01405 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1457777 10002092 Riean_1325 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045988.1 1456038 R 693978 CDS YP_004045989.1 313206812 10002093 1457895..1458689 1 NC_014738.1 KEGG: fba:FIC_02509 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2797); hypothetical protein 1458689 10002093 Riean_1326 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045989.1 1457895 D 693978 CDS YP_004045990.1 313206813 10002094 1458846..1460279 1 NC_014738.1 COGs: COG0621 2-methylthioadenine synthetase; InterPro IPR002792: IPR013848: IPR005839: IPR006463: IPR 007197: IPR006638: IPR020612; KEGG: fba:FIC_00080 (dimethylallyl)adenosine tRNA methylthiotransferase; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: tRNA 2-methylthioadenine synthetase; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; tRNA-i(6)a37 thiotransferase enzyme miab 1460279 10002094 Riean_1327 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA-i(6)a37 thiotransferase enzyme miab YP_004045990.1 1458846 D 693978 CDS YP_004045991.1 313206814 10002095 1460308..1461582 1 NC_014738.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR020441: IPR002197: IPR003593; KEGG: fba:FIC_00079 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Transcriptional regulator; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; transcriptional regulator 1461582 10002095 Riean_1328 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator YP_004045991.1 1460308 D 693978 CDS YP_004045992.1 313206815 10002096 1461586..1462128 1 NC_014738.1 KEGG: fba:FIC_00078 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1462128 10002096 Riean_1329 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045992.1 1461586 D 693978 CDS YP_004045993.1 313206816 10002097 1462133..1463539 1 NC_014738.1 KEGG: fba:FIC_00077 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1463539 10002097 Riean_1330 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045993.1 1462133 D 693978 CDS YP_004045994.1 313206817 10002098 complement(1463553..1463894) 1 NC_014738.1 InterPro IPR000100: IPR020539; KEGG: fjo:Fjoh_0970 ribonuclease P protein component; PFAM: ribonuclease P protein; SPTR: Ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; ribonuclease p protein component 1463894 10002098 Riean_1331 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribonuclease p protein component YP_004045994.1 1463553 R 693978 CDS YP_004045995.1 313206818 10002099 complement(1463891..1464619) 1 NC_014738.1 COGs: COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1; InterPro IPR000594; KEGG: fba:FIC_00072 HesA/MoeB/ThiF family protein; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: HesA/MoeB/ThiF family protein; PFAM: ThiF family; uba/thif-type nad/fad binding protein 1464619 10002099 Riean_1332 Riemerella anatipestifer ATCC 11845 = DSM 15868 uba/thif-type nad/fad binding protein YP_004045995.1 1463891 R 693978 CDS YP_004045996.1 313206819 10002100 complement(1464616..1465242) 1 NC_014738.1 COGs: COG0084 Mg-dependent DNase; InterPro IPR001130: IPR012278; KEGG: fba:FIC_00071 TatD-related deoxyribonuclease; PFAM: TatD-related deoxyribonuclease; SPTR: TatD deoxyribonuclease; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; tatD-related deoxyribonuclease 1465242 10002100 Riean_1333 Riemerella anatipestifer ATCC 11845 = DSM 15868 tatD-related deoxyribonuclease YP_004045996.1 1464616 R 693978 CDS YP_004045997.1 313206820 10002101 1465313..1465933 1 NC_014738.1 InterPro IPR001647; KEGG: fba:FIC_00070 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: TetR family transcriptional regulator; PFAM: Bacterial regulatory proteins, tetR family; regulatory protein tetr 1465933 10002101 Riean_1334 Riemerella anatipestifer ATCC 11845 = DSM 15868 regulatory protein tetr YP_004045997.1 1465313 D 693978 CDS YP_004045998.1 313206821 10002102 complement(1465993..1466466) 1 NC_014738.1 KEGG: fba:FIC_02375 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1466466 10002102 Riean_1335 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045998.1 1465993 R 693978 CDS YP_004045999.1 313206822 10002103 complement(1466515..1467246) 1 NC_014738.1 COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: fba:FIC_02374 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Rossmann fold nucleotide-binding protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2; hypothetical protein 1467246 10002103 Riean_1336 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004045999.1 1466515 R 693978 CDS YP_004046000.1 313206823 10002104 complement(1467243..1467956) 1 NC_014738.1 COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835; KEGG: fba:FIC_02373 nucleotidyltransferase family protein; PFAM: Nucleotidyl transferase; SPTR: Nucleotidyltransferase family protein; PFAM: Nucleotidyl transferase; nucleotidyl transferase 1467956 10002104 Riean_1337 Riemerella anatipestifer ATCC 11845 = DSM 15868 nucleotidyl transferase YP_004046000.1 1467243 R 693978 CDS YP_004046001.1 313206824 10002105 complement(1467963..1469165) 1 NC_014738.1 COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR005252: IPR003382: IPR007085; KEGG: fba:FIC_00067 phosphopantothenoylcysteine decarboxylase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: Phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 1469165 10002105 Riean_1338 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_004046001.1 1467963 R 693978 CDS YP_004046002.1 313206825 10002106 complement(1469277..1469600) 1 NC_014738.1 InterPro IPR006110; KEGG: fba:FIC_00068 hypothetical protein; PFAM: RNA polymerase Rpb6; SPTR: Putative uncharacterized protein; PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; RNA polymerase rpb6 1469600 10002106 Riean_1339 Riemerella anatipestifer ATCC 11845 = DSM 15868 RNA polymerase rpb6 YP_004046002.1 1469277 R 693978 CDS YP_004046003.1 313206826 10002107 complement(1469681..1470565) 1 NC_014738.1 COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: fba:FIC_00069 lipoprotein protein, putative; SPTR: Lipoprotein protein, putative; TIGRFAM: outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein yfio 1470565 10002107 Riean_1340 Riemerella anatipestifer ATCC 11845 = DSM 15868 outer membrane assembly lipoprotein yfio YP_004046003.1 1469681 R 693978 CDS YP_004046004.1 313206827 10002108 1470727..1471758 1 NC_014738.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR008089: IPR001509; KEGG: fba:FIC_02510 UDP-N-acetylglucosamine 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase family protein; PFAM: NAD dependent epimerase/dehydratase family; naD-dependent epimerase/dehydratase 1471758 10002108 Riean_1341 Riemerella anatipestifer ATCC 11845 = DSM 15868 naD-dependent epimerase/dehydratase YP_004046004.1 1470727 D 693978 CDS YP_004046005.1 313206828 10002109 1471852..1472073 1 NC_014738.1 InterPro IPR021527; KEGG: fba:FIC_02511 hypothetical protein; PFAM: Protein of unknown function DUF2795; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2795); hypothetical protein 1472073 10002109 Riean_1342 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046005.1 1471852 D 693978 CDS YP_004046006.1 313206829 10002110 1472180..1475251 1 NC_014738.1 COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterPro IPR014018: IPR000185: IPR011115: IPR011130: IPR 001650: IPR011116: IPR020937; KEGG: fba:FIC_02512 preprotein translocase subunit SecA; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; SPTR: Preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD-like domain; Helicase conserved C-terminal domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; protein translocase subunit seca 1475251 10002110 Riean_1343 Riemerella anatipestifer ATCC 11845 = DSM 15868 protein translocase subunit seca YP_004046006.1 1472180 D 693978 CDS YP_004046007.1 313206830 10002111 complement(1475339..1476226) 1 NC_014738.1 KEGG: bfr:BF3435 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1476226 10002111 Riean_1344 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046007.1 1475339 R 693978 CDS YP_004046008.1 313206831 10002112 complement(1476247..1478301) 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910; KEGG: coc:Coch_1572 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; SPTR: Putative TonB dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; tonb-dependent receptor plug 1478301 10002112 Riean_1345 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004046008.1 1476247 R 693978 CDS YP_004046009.1 313206832 10002113 1479040..1480005 1 NC_014738.1 COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600: IPR002731; KEGG: fba:FIC_02513 glucokinase; PFAM: ROK family protein; ATPase BadF/BadG/BcrA/BcrD type; SPTR: Glucokinase; PFAM: ROK family; TIGRFAM: ROK family protein (glucokinase); glucokinase 1480005 10002113 Riean_1346 Riemerella anatipestifer ATCC 11845 = DSM 15868 glucokinase YP_004046009.1 1479040 D 693978 CDS YP_004046010.1 313206833 10002114 1480150..1481457 1 NC_014738.1 COGs: COG1160 GTPase; InterPro IPR005225: IPR016484: IPR002917; KEGG: fba:FIC_00664 GTP-binding protein EngA; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein engA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; ribosome-associated GTPase enga 1481457 10002114 Riean_1347 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribosome-associated GTPase enga YP_004046010.1 1480150 D 693978 CDS YP_004046011.1 313206834 10002115 1481618..1482643 1 NC_014738.1 COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: fba:FIC_00099 rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; SPTR: Rod shape-determining protein mreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; cell shape determining protein, mreb/mrl family 1482643 10002115 Riean_1348 Riemerella anatipestifer ATCC 11845 = DSM 15868 cell shape determining protein, mreb/mrl family YP_004046011.1 1481618 D 693978 CDS YP_004046012.1 313206835 10002116 1482667..1483521 1 NC_014738.1 COGs: COG1792 Cell shape-determining protein; InterPro IPR007221; KEGG: fba:FIC_00100 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Rod shape-determining protein mreC; PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; rod shape-determining protein mrec 1483521 10002116 Riean_1349 Riemerella anatipestifer ATCC 11845 = DSM 15868 rod shape-determining protein mrec YP_004046012.1 1482667 D 693978 CDS YP_004046013.1 313206836 10002117 1483511..1484020 1 NC_014738.1 InterPro IPR007227; KEGG: fba:FIC_00101 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; rod shape-determining protein mred 1484020 10002117 Riean_1350 Riemerella anatipestifer ATCC 11845 = DSM 15868 rod shape-determining protein mred YP_004046013.1 1483511 D 693978 CDS YP_004046014.1 313206837 10002118 1484017..1486059 1 NC_014738.1 COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311: IPR001460: IPR002137; KEGG: fba:FIC_00102 penicillin-binding protein 2 (PBP-2); PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 2 (PBP-2); PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; peptidoglycan glycosyltransferase 1486059 10002118 Riean_1351 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidoglycan glycosyltransferase YP_004046014.1 1484017 D 693978 CDS YP_004046015.1 313206838 10002119 1486034..1487281 1 NC_014738.1 COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: fba:FIC_00103 rod shape-determining protein RodA; PFAM: cell cycle protein; SPTR: Possible rod shape determining protein FtsW; PFAM: Cell cycle protein; cell cycle protein 1487281 10002119 Riean_1352 Riemerella anatipestifer ATCC 11845 = DSM 15868 cell cycle protein YP_004046015.1 1486034 D 693978 CDS YP_004046016.1 313206839 10002120 1487360..1488196 1 NC_014738.1 COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: fba:FIC_00405 flagellar motor protein MotB; PFAM: OmpA/MotB domain protein; SPTR: Putative flagellar motor protein MotB; PFAM: OmpA family; ompa/motb domain-containing protein 1488196 10002120 Riean_1353 Riemerella anatipestifer ATCC 11845 = DSM 15868 ompa/motb domain-containing protein YP_004046016.1 1487360 D 693978 CDS YP_004046017.1 313206840 10002121 1488287..1488934 1 NC_014738.1 COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: fba:FIC_00406 O-methyltransferase; PFAM: O-methyltransferase family 3; PRIAM: Caffeoyl-CoA O-methyltransferase; SPTR: Possible caffeoyl-CoA O-methyltransferase; PFAM: O-methyltransferase; caffeoyl-CoA o-methyltransferase 1488934 10002121 Riean_1354 Riemerella anatipestifer ATCC 11845 = DSM 15868 caffeoyl-CoA o-methyltransferase YP_004046017.1 1488287 D 693978 CDS YP_004046018.1 313206841 10002122 1488939..1489652 1 NC_014738.1 COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR013247: IPR000064; KEGG: fba:FIC_00407 NLP/P60 protein; PFAM: NLP/P60 protein; SH3 type 3 domain protein; SPTR: Possible cell wall-associated hydrolase lipoprotein; PFAM: NlpC/P60 family; Bacterial SH3 domain; nlp/p60 protein 1489652 10002122 Riean_1355 Riemerella anatipestifer ATCC 11845 = DSM 15868 nlp/p60 protein YP_004046018.1 1488939 D 693978 CDS YP_004046019.1 313206842 10002123 1489653..1490108 1 NC_014738.1 InterPro IPR012867; KEGG: mba:Mbar_A3397 hypothetical protein; PFAM: protein of unknown function DUF1648; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1648); hypothetical protein 1490108 10002123 Riean_1356 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046019.1 1489653 D 693978 CDS YP_004046020.1 313206843 10002124 1490111..1491340 1 NC_014738.1 COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: fba:FIC_00409 3-deoxy-D-manno-octulosonic-acid transferase; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; SPTR: 3-deoxy-D-manno-octulosonic-acid transferase; PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 1491340 10002124 Riean_1357 Riemerella anatipestifer ATCC 11845 = DSM 15868 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_004046020.1 1490111 D 693978 CDS YP_004046021.1 313206844 10002125 1491441..1493468 1 NC_014738.1 COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: cpi:Cpin_0121 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; tonb-dependent receptor plug 1493468 10002125 Riean_1358 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004046021.1 1491441 D 693978 CDS YP_004046022.1 313206845 10002126 1493482..1493946 1 NC_014738.1 KEGG: fjo:Fjoh_0927 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1493946 10002126 Riean_1359 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046022.1 1493482 D 693978 CDS YP_004046023.1 313206846 10002127 complement(1493938..1494264) 1 NC_014738.1 COGs: COG2388 acetyltransferase; InterPro IPR000182; KEGG: fba:FIC_02055 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family; hypothetical protein 1494264 10002127 Riean_1360 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046023.1 1493938 R 693978 CDS YP_004046024.1 313206847 10002128 1494359..1494769 1 NC_014738.1 InterPro IPR009474; KEGG: fba:FIC_02459 hypothetical protein; PFAM: protein of unknown function DUF1094; SPTR: Protein of hypothetical function DUF1094; PFAM: Protein of unknown function (DUF1094); hypothetical protein 1494769 10002128 Riean_1361 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046024.1 1494359 D 693978 CDS YP_004046025.1 313206848 10002129 complement(1494857..1495885) 1 NC_014738.1 COGs: COG0407 Uroporphyrinogen-III decarboxylase; InterPro IPR006361: IPR000257; KEGG: fba:FIC_00014 uroporphyrinogen III decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; uroporphyrinogen decarboxylase 1495885 10002129 Riean_1362 Riemerella anatipestifer ATCC 11845 = DSM 15868 uroporphyrinogen decarboxylase YP_004046025.1 1494857 R 693978 CDS YP_004046026.1 313206849 10002130 complement(1495910..1496569) 1 NC_014738.1 COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: fba:FIC_00013 uroporphyrinogen-III synthase; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: Uroporphyrinogen-III synthase, divergent, Flavobacterial type; PFAM: Uroporphyrinogen-III synthase HemD; uroporphyrinogen iii synthase hem4 1496569 10002130 Riean_1363 Riemerella anatipestifer ATCC 11845 = DSM 15868 uroporphyrinogen iii synthase hem4 YP_004046026.1 1495910 R 693978 CDS YP_004046027.1 313206850 10002131 complement(1496581..1497492) 1 NC_014738.1 COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: fba:FIC_00012 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; SPTR: Hydroxymethylbilane synthase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; porphobilinogen deaminase 1497492 10002131 Riean_1364 Riemerella anatipestifer ATCC 11845 = DSM 15868 porphobilinogen deaminase YP_004046027.1 1496581 R 693978 CDS YP_004046028.1 313206851 10002132 complement(1497476..1498771) 1 NC_014738.1 COGs: COG0373 Glutamyl-tRNA reductase; InterPro IPR000343: IPR015895: IPR006151: IPR018214; KEGG: fba:FIC_00011 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; PRIAM: Glutamyl-tRNA reductase; SPTR: Glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase 1498771 10002132 Riean_1365 Riemerella anatipestifer ATCC 11845 = DSM 15868 glutamyl-tRNA reductase YP_004046028.1 1497476 R 693978 CDS YP_004046029.1 313206852 10002133 1499008..1499580 1 NC_014738.1 InterPro IPR000595; KEGG: fba:FIC_00446 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; PFAM: cyclic nucleotide-binding; SPTR: cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; PFAM: Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 1499580 10002133 Riean_1366 Riemerella anatipestifer ATCC 11845 = DSM 15868 cyclic nucleotide-binding protein YP_004046029.1 1499008 D 693978 CDS YP_004046030.1 313206853 10002134 1499749..1500249 1 NC_014738.1 InterPro IPR013032; KEGG: pfd:PFDG_03496 conserved hypothetical protein; SPTR: Cob-I1; hypothetical protein 1500249 10002134 Riean_1367 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046030.1 1499749 D 693978 CDS YP_004046031.1 313206854 10002135 1500308..1501120 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_00050 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1501120 10002135 Riean_1368 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046031.1 1500308 D 693978 CDS YP_004046032.1 313206855 10002136 1501108..1501461 1 NC_014738.1 KEGG: mif:Metin_1237 DNA helicase; SPTR: Putative uncharacterized protein; hypothetical protein 1501461 10002136 Riean_1369 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046032.1 1501108 D 693978 CDS YP_004046033.1 313206856 10002137 complement(1501502..1502566) 1 NC_014738.1 KEGG: fba:FIC_00385 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1502566 10002137 Riean_1370 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046033.1 1501502 R 693978 CDS YP_004046034.1 313206857 10002138 complement(1502711..1504966) 1 NC_014738.1 COGs: COG0306 Phosphate/sulphate permease; KEGG: cat:CA2559_01080 phosphate sodium symporter; SPTR: Phosphate sodium symporter; PFAM: Phosphate transporter family; phosphate sodium symporter 1504966 10002138 Riean_1371 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphate sodium symporter YP_004046034.1 1502711 R 693978 CDS YP_004046035.1 313206858 10002139 complement(1505133..1505405) 1 NC_014738.1 KEGG: fba:FIC_00060 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1505405 10002139 Riean_1372 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046035.1 1505133 R 693978 CDS YP_004046036.1 313206859 10002140 complement(1505494..1507101) 1 NC_014738.1 COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004647: IPR004646: IPR011167: IPR020557; KEGG: fjo:Fjoh_0881 tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type hydro-lyase tartrate/fumarate alpha region; SPTR: Fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; fumarase 1507101 10002140 Riean_1373 Riemerella anatipestifer ATCC 11845 = DSM 15868 fumarase YP_004046036.1 1505494 R 693978 CDS YP_004046037.1 313206860 10002141 complement(1507232..1507561) 1 NC_014738.1 KEGG: fba:FIC_01958 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1507561 10002141 Riean_1374 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046037.1 1507232 R 693978 CDS YP_004046038.1 313206861 10002142 complement(1507641..1508900) 1 NC_014738.1 COGs: COG2195 Di- and tripeptidase; InterPro IPR010161: IPR002933: IPR011650: IPR001261; KEGG: smm:Smp_111420 peptidase T (M20 family); PFAM: peptidase dimerisation domain protein; peptidase M20; PRIAM: Tripeptide aminopeptidase; SPTR: Tripeptide aminopeptidase; TIGRFAM: peptidase T; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T; peptidase t 1508900 10002142 Riean_1375 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase t YP_004046038.1 1507641 R 693978 CDS YP_004046039.1 313206862 10002143 1509084..1509932 1 NC_014738.1 COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: fba:FIC_00098 hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; PRIAM: Hydroxymethylglutaryl-CoA lyase; SPTR: Hydroxymethylglutaryl-CoA lyase like protein; PFAM: HMGL-like; hydroxymethylglutaryl-CoA lyase 1509932 10002143 Riean_1376 Riemerella anatipestifer ATCC 11845 = DSM 15868 hydroxymethylglutaryl-CoA lyase YP_004046039.1 1509084 D 693978 CDS YP_004046040.1 313206863 10002144 1510021..1511562 1 NC_014738.1 COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR006195: IPR002315: IPR002314: IPR004154; KEGG: fba:FIC_00031 glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; SPTR: Glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type; glycyl-tRNA synthetase 1511562 10002144 Riean_1377 Riemerella anatipestifer ATCC 11845 = DSM 15868 glycyl-tRNA synthetase YP_004046040.1 1510021 D 693978 CDS YP_004046041.1 313206864 10002145 1511671..1512891 1 NC_014738.1 COGs: COG0520 Selenocysteine lyase; InterPro IPR010970: IPR000192: IPR020578; KEGG: fba:FIC_00032 cysteine desulfurase; PFAM: aminotransferase class V; SPTR: Cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; cysteine desulfurase 1512891 10002145 Riean_1378 Riemerella anatipestifer ATCC 11845 = DSM 15868 cysteine desulfurase YP_004046041.1 1511671 D 693978 CDS YP_004046042.1 313206865 10002146 1512919..1513875 1 NC_014738.1 KEGG: ddi:DDB_G0272670 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1513875 10002146 Riean_1379 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046042.1 1512919 D 693978 CDS YP_004046043.1 313206866 10002147 complement(1513960..1514445) 1 NC_014738.1 InterPro IPR005358; KEGG: fba:FIC_00022 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Fe-S-cluster oxidoreductase; PFAM: Uncharacterised protein family (UPF0153); hypothetical protein 1514445 10002147 Riean_1380 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046043.1 1513960 R 693978 CDS YP_004046044.1 313206867 10002148 complement(1514770..1516992) 1 NC_014738.1 COGs: COG0376 Catalase (peroxidase I); InterPro IPR002016: IPR000763: IPR019794; KEGG: cja:CJA_2891 catalase/peroxidase HPI; PFAM: Haem peroxidase; SPTR: Catalase-peroxidase 1; TIGRFAM: catalase/peroxidase HPI; PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI; catalase/peroxidase hpi 1516992 10002148 Riean_1381 Riemerella anatipestifer ATCC 11845 = DSM 15868 catalase/peroxidase hpi YP_004046044.1 1514770 R 693978 CDS YP_004046045.1 313206868 10002149 1517189..1517707 1 NC_014738.1 InterPro IPR000182; KEGG: coc:Coch_0431 prolyl aminopeptidase; PFAM: GCN5-related N-acetyltransferase; SPTR: N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; spermine/spermidine n-acetyltransferase 1517707 10002149 Riean_1382 Riemerella anatipestifer ATCC 11845 = DSM 15868 spermine/spermidine n-acetyltransferase YP_004046045.1 1517189 D 693978 CDS YP_004046046.1 313206869 10002150 complement(1517711..1518484) 1 NC_014738.1 COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fba:FIC_02037 rRNA methylase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: Putative rRNA methylase; PFAM: SpoU rRNA Methylase family; tRNA/rRNA methyltransferase (spou) 1518484 10002150 Riean_1383 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA/rRNA methyltransferase (spou) YP_004046046.1 1517711 R 693978 CDS YP_004046047.1 313206870 10002151 complement(1518491..1519978) 1 NC_014738.1 COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: fba:FIC_02036 DNA recombination protein RmuC; PFAM: protein of unknown function DUF195; SPTR: Possible DNA recombination protein RmuC; PFAM: RmuC family; hypothetical protein 1519978 10002151 Riean_1384 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046047.1 1518491 R 693978 CDS YP_004046048.1 313206871 10002152 complement(1520032..1521201) 1 NC_014738.1 COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR006406: IPR015977: IPR007229; KEGG: fba:FIC_02033 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; SPTR: Nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase; nicotinate phosphoribosyltransferase 1521201 10002152 Riean_1385 Riemerella anatipestifer ATCC 11845 = DSM 15868 nicotinate phosphoribosyltransferase YP_004046048.1 1520032 R 693978 CDS YP_004046049.1 313206872 10002153 complement(1521313..1521789) 1 NC_014738.1 COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR002177: IPR008331; KEGG: fba:FIC_02032 non-specific DNA-binding protein Dps / iron-binding ferritin-like antioxidant protein / ferroxidase; PFAM: Ferritin Dps family protein; SPTR: DDPS family NA-binding protein; PFAM: Ferritin-like domain; ferritin dps family protein 1521789 10002153 Riean_1386 Riemerella anatipestifer ATCC 11845 = DSM 15868 ferritin dps family protein YP_004046049.1 1521313 R 693978 CDS YP_004046050.1 313206873 10002154 1522343..1522831 1 NC_014738.1 KEGG: npu:Npun_R5806 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1522831 10002154 Riean_1387 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046050.1 1522343 D 693978 CDS YP_004046051.1 313206874 10002155 1523087..1524688 1 NC_014738.1 KEGG: bvu:BVU_3793 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1524688 10002155 Riean_1388 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046051.1 1523087 D 693978 CDS YP_004046052.1 313206875 10002156 1524702..1525187 1 NC_014738.1 KEGG: cat:CA2559_08206 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1525187 10002156 Riean_1389 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046052.1 1524702 D 693978 CDS YP_004046053.1 313206876 10002157 1525197..1526075 1 NC_014738.1 KEGG: bvu:BVU_3796 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1526075 10002157 Riean_1390 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046053.1 1525197 D 693978 CDS YP_004046054.1 313206877 10002158 1526081..1527010 1 NC_014738.1 KEGG: bvu:BVU_3795 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1527010 10002158 Riean_1391 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046054.1 1526081 D 693978 CDS YP_004046055.1 313206878 10002159 1527178..1527561 1 NC_014738.1 COGs: COG0048 Ribosomal protein S12; InterPro IPR005679: IPR006032; KEGG: fba:FIC_02030 30S ribosomal protein S12; PFAM: ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 1527561 10002159 Riean_1392 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S12 YP_004046055.1 1527178 D 693978 CDS YP_004046056.1 313206879 10002160 1527587..1528063 1 NC_014738.1 COGs: COG0049 Ribosomal protein S7; InterPro IPR005717: IPR000235: IPR020606; KEGG: fba:FIC_02029 30S ribosomal protein S7; PFAM: ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 1528063 10002160 Riean_1393 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S7 YP_004046056.1 1527587 D 693978 CDS YP_004046057.1 313206880 10002161 1528070..1530187 1 NC_014738.1 COGs: COG0480 Translation elongation factors (GTPase); InterPro IPR004540: IPR005225: IPR000795: IPR004161: IPR 005517: IPR000640; KEGG: fba:FIC_02028 elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; SPTR: Elongation factor EF2; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (ef-2/ef-g) 1530187 10002161 Riean_1394 Riemerella anatipestifer ATCC 11845 = DSM 15868 translation elongation factor 2 (ef-2/ef-g) YP_004046057.1 1528070 D 693978 CDS YP_004046058.1 313206881 10002162 1530210..1530515 1 NC_014738.1 COGs: COG0051 Ribosomal protein S10; InterPro IPR005731: IPR001848: IPR018268; KEGG: fba:FIC_02027 SSU ribosomal protein S10p (S20e); PFAM: ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein s10p 1530515 10002162 Riean_1395 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein s10p YP_004046058.1 1530210 D 693978 CDS YP_004046059.1 313206882 10002163 1530643..1530774 1 NC_014738.1 hypothetical protein 1530774 10002163 Riean_1396 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046059.1 1530643 D 693978 CDS YP_004046060.1 313206883 10002164 1530764..1532125 1 NC_014738.1 KEGG: pgn:PGN_2080 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1532125 10002164 Riean_1397 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046060.1 1530764 D 693978 CDS YP_004046061.1 313206884 10002165 1532488..1532802 1 NC_014738.1 KEGG: coc:Coch_1942 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1532802 10002165 Riean_1398 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046061.1 1532488 D 693978 CDS YP_004046062.1 313206885 10002166 1532966..1533271 1 NC_014738.1 KEGG: cya:CYA_1515 cytochrome oxidase assembly protein; SPTR: Putative uncharacterized protein; hypothetical protein 1533271 10002166 Riean_1399 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046062.1 1532966 D 693978 CDS YP_004046063.1 313206886 10002167 1533255..1534106 1 NC_014738.1 InterPro IPR019115; KEGG: pgn:PGN_1837 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1534106 10002167 Riean_1400 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046063.1 1533255 D 693978 CDS YP_004046064.1 313206887 10002168 1534277..1535098 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_02022 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1535098 10002168 Riean_1401 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046064.1 1534277 D 693978 CDS YP_004046065.1 313206888 10002169 1535211..1535999 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_01963 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1535999 10002169 Riean_1402 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046065.1 1535211 D 693978 CDS YP_004046066.1 313206889 10002170 1536102..1537325 1 NC_014738.1 KEGG: fba:FIC_00296 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1537325 10002170 Riean_1403 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046066.1 1536102 D 693978 CDS YP_004046067.1 313206890 10002171 complement(1537334..1538095) 1 NC_014738.1 KEGG: cch:Cag_1572 hypothetical protein; SPTR: GDP-L-fucose synthase; hypothetical protein 1538095 10002171 Riean_1404 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046067.1 1537334 R 693978 CDS YP_004046068.1 313206891 10002172 complement(1538148..1539176) 1 NC_014738.1 COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015; KEGG: fba:FIC_00299 ferrochelatase, protoheme ferro-lyase; PFAM: ferrochelatase; PRIAM: Ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; ferrochelatase 1539176 10002172 Riean_1405 Riemerella anatipestifer ATCC 11845 = DSM 15868 ferrochelatase YP_004046068.1 1538148 R 693978 CDS YP_004046069.1 313206892 10002173 complement(1539202..1540080) 1 NC_014738.1 COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR014824: IPR001075; KEGG: fba:FIC_00300 NifU related protein; PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; SPTR: NifU protein; PFAM: Scaffold protein Nfu/NifU N terminal; NifU-like domain; nitrogen-fixing nifu domain-containing protein 1540080 10002173 Riean_1406 Riemerella anatipestifer ATCC 11845 = DSM 15868 nitrogen-fixing nifu domain-containing protein YP_004046069.1 1539202 R 693978 CDS YP_004046070.1 313206893 10002174 1540214..1540741 1 NC_014738.1 COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: fba:FIC_00301 hexapeptide transferase family protein; SPTR: Acetyltransferase/carbonic anhydrase; hexapeptide transferase family protein 1540741 10002174 Riean_1407 Riemerella anatipestifer ATCC 11845 = DSM 15868 hexapeptide transferase family protein YP_004046070.1 1540214 D 693978 CDS YP_004046071.1 313206894 10002175 1540728..1541270 1 NC_014738.1 COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: lsp:Bsph_2373 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GNAT family acetyltransferase; PFAM: Acetyltransferase (GNAT) family; Gcn5-like N-acetyltransferase 1541270 10002175 Riean_1408 Riemerella anatipestifer ATCC 11845 = DSM 15868 Gcn5-like N-acetyltransferase YP_004046071.1 1540728 D 693978 CDS YP_004046072.1 313206895 10002176 1541298..1543427 1 NC_014738.1 COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR003593; KEGG: fba:FIC_00303 helicase-related protein; SMART: AAA ATPase; SPTR: Helicase-related protein; PFAM: PIF1 helicase; AAA ATPase 1543427 10002176 Riean_1409 Riemerella anatipestifer ATCC 11845 = DSM 15868 AAA ATPase YP_004046072.1 1541298 D 693978 CDS YP_004046073.1 313206896 10002177 complement(1543451..1544449) 1 NC_014738.1 COGs: COG3178 phosphotransferase related to Ser/Thr protein kinase; InterPro IPR002575; KEGG: fba:FIC_02370 hypothetical protein; PFAM: aminoglycoside phosphotransferase; SPTR: Putative uncharacterized protein; PFAM: Phosphotransferase enzyme family; aminoglycoside phosphotransferase 1544449 10002177 Riean_1410 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminoglycoside phosphotransferase YP_004046073.1 1543451 R 693978 CDS YP_004046074.1 313206897 10002178 complement(1544483..1546126) 1 NC_014738.1 COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR003010: IPR004563; KEGG: fba:FIC_00304 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; apolipoprotein n-acyltransferase 1546126 10002178 Riean_1411 Riemerella anatipestifer ATCC 11845 = DSM 15868 apolipoprotein n-acyltransferase YP_004046074.1 1544483 R 693978 CDS YP_004046075.1 313206898 10002179 1546184..1546594 1 NC_014738.1 InterPro IPR006976; KEGG: btl:BALH_4510 antibiotic resistance protein; PFAM: VanZ family protein; SPTR: Putative uncharacterized protein; PFAM: VanZ like family; vanz family protein 1546594 10002179 Riean_1412 Riemerella anatipestifer ATCC 11845 = DSM 15868 vanz family protein YP_004046075.1 1546184 D 693978 CDS YP_004046076.1 313206899 10002180 complement(1546584..1548389) 1 NC_014738.1 COGs: COG0322 Nuclease subunit of the excinuclease complex; InterPro IPR000305: IPR001162: IPR004791; KEGG: fba:FIC_00429 excinuclease ABC subunit C; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: UvrABC system protein C; TIGRFAM: excinuclease ABC, C subunit; PFAM: UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; excinuclease ABC, c subunit 1548389 10002180 Riean_1413 Riemerella anatipestifer ATCC 11845 = DSM 15868 excinuclease ABC, c subunit YP_004046076.1 1546584 R 693978 CDS YP_004046077.1 313206900 10002181 complement(1548394..1549383) 1 NC_014738.1 COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: coc:Coch_0400 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1549383 10002181 Riean_1414 Riemerella anatipestifer ATCC 11845 = DSM 15868 cation diffusion facilitator family transporter YP_004046077.1 1548394 R 693978 CDS YP_004046078.1 313206901 10002182 complement(1549396..1549986) 1 NC_014738.1 COGs: COG0237 Dephospho-CoA kinase; InterPro IPR001977; KEGG: fba:FIC_02207 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase 1549986 10002182 Riean_1415 Riemerella anatipestifer ATCC 11845 = DSM 15868 dephospho-CoA kinase YP_004046078.1 1549396 R 693978 CDS YP_004046079.1 313206902 10002183 complement(1550002..1550868) 1 NC_014738.1 COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: fba:FIC_02208 beta-lactamase-like protein; SPTR: Metal dependent hydrolase; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase-like protein 1550868 10002183 Riean_1416 Riemerella anatipestifer ATCC 11845 = DSM 15868 beta-lactamase-like protein YP_004046079.1 1550002 R 693978 CDS YP_004046080.1 313206903 10002184 complement(1550905..1551927) 1 NC_014738.1 COGs: COG2255 Holliday junction resolvasome helicase subunit; InterPro IPR004605: IPR008824: IPR003959: IPR008823: IPR 003593; KEGG: fba:FIC_02212 Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; SMART: AAA ATPase; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; holliday junction DNA helicase ruvb 1551927 10002184 Riean_1417 Riemerella anatipestifer ATCC 11845 = DSM 15868 holliday junction DNA helicase ruvb YP_004046080.1 1550905 R 693978 CDS YP_004046081.1 313206904 10002185 complement(1552089..1552595) 1 NC_014738.1 COGs: COG1528 Ferritin-like protein; InterPro IPR009040: IPR008331; KEGG: fba:FIC_00402 ferritin; PFAM: Ferritin Dps family protein; PRIAM: Ferroxidase; SPTR: Ferroxidase; PFAM: Ferritin-like domain; ferroxidase 1552595 10002185 Riean_1418 Riemerella anatipestifer ATCC 11845 = DSM 15868 ferroxidase YP_004046081.1 1552089 R 693978 CDS YP_004046082.1 313206905 10002186 complement(1552674..1553186) 1 NC_014738.1 COGs: COG2816 NTP pyrophosphohydrolase containing a Zn-finger probably nucleic-aciD-binding; InterPro IPR000086; KEGG: fba:FIC_00164 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: MutT/nudix family protein; PFAM: NUDIX domain; nudix hydrolase 1553186 10002186 Riean_1419 Riemerella anatipestifer ATCC 11845 = DSM 15868 nudix hydrolase YP_004046082.1 1552674 R 693978 CDS YP_004046083.1 313206906 10002187 complement(1553191..1554102) 1 NC_014738.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR011932: IPR004107: IPR002104; KEGG: fba:FIC_00165 integrase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Integrase; TIGRFAM: tyrosine recombinase XerD; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD; tyrosine recombinase xerd 1554102 10002187 Riean_1420 Riemerella anatipestifer ATCC 11845 = DSM 15868 tyrosine recombinase xerd YP_004046083.1 1553191 R 693978 CDS YP_004046084.1 313206907 10002188 complement(1554103..1554534) 1 NC_014738.1 COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125: IPR016473: IPR016192; KEGG: fjo:Fjoh_0530 CMP/dCMP deaminase, zinc-binding; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Competence protein ComEB; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; cmp/dcmp deaminase zinc-binding protein 1554534 10002188 Riean_1421 Riemerella anatipestifer ATCC 11845 = DSM 15868 cmp/dcmp deaminase zinc-binding protein YP_004046084.1 1554103 R 693978 CDS YP_004046085.1 313206908 10002189 complement(1554560..1555324) 1 NC_014738.1 COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753: IPR018376; KEGG: fba:FIC_00167 enoyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/isomerase 1555324 10002189 Riean_1422 Riemerella anatipestifer ATCC 11845 = DSM 15868 enoyl-CoA hydratase/isomerase YP_004046085.1 1554560 R 693978 CDS YP_004046086.1 313206909 10002190 complement(1555337..1556488) 1 NC_014738.1 COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: mxa:MXAN_0697 aldo/keto reductase family oxidoreductase; PFAM: aldo/keto reductase; PRIAM: Pyridoxal 4-dehydrogenase; SPTR: Oxidoreductase, aldo/keto reductase family; PFAM: Aldo/keto reductase family; pyridoxal 4-dehydrogenase 1556488 10002190 Riean_1423 Riemerella anatipestifer ATCC 11845 = DSM 15868 pyridoxal 4-dehydrogenase YP_004046086.1 1555337 R 693978 CDS YP_004046087.1 313206910 10002191 complement(1556538..1558025) 1 NC_014738.1 COGs: COG0753 Catalase; InterPro IPR011614: IPR018028: IPR010582: IPR002226; KEGG: zpr:ZPR_3145 catalase; PFAM: Catalase related subgroup; Catalase domain protein; PRIAM: Catalase; SPTR: Catalase; PFAM: Catalase; Catalase-related immune-responsive; catalase 1558025 10002191 Riean_1424 Riemerella anatipestifer ATCC 11845 = DSM 15868 catalase YP_004046087.1 1556538 R 693978 CDS YP_004046088.1 313206911 10002192 1558169..1559119 1 NC_014738.1 COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: fba:FIC_00169 hydrogen peroxide-inducible genes activator; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: Hydrogen peroxide-inducible genes activator; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; LysR family transcriptional regulator transcriptional regulator 1559119 10002192 Riean_1425 Riemerella anatipestifer ATCC 11845 = DSM 15868 LysR family transcriptional regulator transcriptional regulator YP_004046088.1 1558169 D 693978 CDS YP_004046089.1 313206912 10002193 1559295..1560575 1 NC_014738.1 COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: fba:FIC_00170 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; methionine adenosyltransferase 1560575 10002193 Riean_1426 Riemerella anatipestifer ATCC 11845 = DSM 15868 methionine adenosyltransferase YP_004046089.1 1559295 D 693978 CDS YP_004046090.1 313206913 10002194 1560721..1561317 1 NC_014738.1 COGs: COG0605 Superoxide dismutase; InterPro IPR001189: IPR019831: IPR019832: IPR019833; KEGG: fba:FIC_02380 manganese superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; SPTR: Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; manganese/iron superoxide dismutase 1561317 10002194 Riean_1427 Riemerella anatipestifer ATCC 11845 = DSM 15868 manganese/iron superoxide dismutase YP_004046090.1 1560721 D 693978 CDS YP_004046091.1 313206914 10002195 1561437..1562342 1 NC_014738.1 COGs: COG0781 Transcription termination factor; InterPro IPR006027; KEGG: fba:FIC_00207 transcription termination protein NusB; PFAM: NusB/RsmB/TIM44; SPTR: Transcription termination protein NusB; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; nusb antitermination factor 1562342 10002195 Riean_1428 Riemerella anatipestifer ATCC 11845 = DSM 15868 nusb antitermination factor YP_004046091.1 1561437 D 693978 CDS YP_004046092.1 313206915 10002196 1562354..1562845 1 NC_014738.1 InterPro IPR011467; KEGG: fba:FIC_00208 hypothetical protein; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573); hypothetical protein 1562845 10002196 Riean_1429 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046092.1 1562354 D 693978 CDS YP_004046093.1 313206916 10002197 1562882..1563214 1 NC_014738.1 COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: fba:FIC_00209 preprotein translocase subunit YajC; PFAM: YajC family protein; SPTR: Preprotein translocase subunit YajC; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; protein translocase subunit yajc 1563214 10002197 Riean_1430 Riemerella anatipestifer ATCC 11845 = DSM 15868 protein translocase subunit yajc YP_004046093.1 1562882 D 693978 CDS YP_004046094.1 313206917 10002198 1563261..1564049 1 NC_014738.1 COGs: COG2966 conserved hypothetical protein; InterPro IPR010619; KEGG: coc:Coch_0908 protein of unknown function DUF1212; PFAM: protein of unknown function DUF1212; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1212); hypothetical protein 1564049 10002198 Riean_1431 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046094.1 1563261 D 693978 CDS YP_004046095.1 313206918 10002199 1564039..1564578 1 NC_014738.1 COGs: COG3610 conserved hypothetical protein; KEGG: coc:Coch_0907 conserved hypothetical protein-like protein; SPTR: Putative uncharacterized protein; hypothetical protein 1564578 10002199 Riean_1432 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046095.1 1564039 D 693978 CDS YP_004046096.1 313206919 10002200 1564586..1565335 1 NC_014738.1 COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002347: IPR002198: IPR020904; KEGG: fba:FIC_00007 oxidoreductase, short chain dehydrogenase/reductase family; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Serine 3-dehydrogenase; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase sdr 1565335 10002200 Riean_1433 Riemerella anatipestifer ATCC 11845 = DSM 15868 short-chain dehydrogenase/reductase sdr YP_004046096.1 1564586 D 693978 CDS YP_004046097.1 313206920 10002201 complement(1565391..1566851) 1 NC_014738.1 COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR002308: IPR015803; KEGG: fba:FIC_00398 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; PRIAM: Cysteine--tRNA ligase; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 1566851 10002201 Riean_1434 Riemerella anatipestifer ATCC 11845 = DSM 15868 cysteinyl-tRNA synthetase YP_004046097.1 1565391 R 693978 CDS YP_004046098.1 313206921 10002202 complement(1566879..1567544) 1 NC_014738.1 COGs: COG0302 GTP cyclohydrolase I; InterPro IPR001474: IPR020602: IPR018234; KEGG: fba:FIC_00397 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase i 1567544 10002202 Riean_1435 Riemerella anatipestifer ATCC 11845 = DSM 15868 GTP cyclohydrolase i YP_004046098.1 1566879 R 693978 CDS YP_004046099.1 313206922 10002203 complement(1567668..1568777) 1 NC_014738.1 COGs: COG0562 UDP-galactopyranose mutase; InterPro IPR004379: IPR006076: IPR015899; KEGG: dfe:Dfer_3361 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD dependent oxidoreductase; PRIAM: UDP-galactopyranose mutase; SPTR: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase; FAD dependent oxidoreductase; TIGRFAM: UDP-galactopyranose mutase; UDP-galactopyranose mutase 1568777 10002203 Riean_1436 Riemerella anatipestifer ATCC 11845 = DSM 15868 UDP-galactopyranose mutase YP_004046099.1 1567668 R 693978 CDS YP_004046100.1 313206923 10002204 1568844..1569845 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fba:FIC_00364 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferases involved in cell wall biogenesis; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1569845 10002204 Riean_1437 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004046100.1 1568844 D 693978 CDS YP_004046101.1 313206924 10002205 1569848..1570945 1 NC_014738.1 InterPro IPR019974; KEGG: par:Psyc_1209 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1570945 10002205 Riean_1438 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046101.1 1569848 D 693978 CDS YP_004046102.1 313206925 10002206 1570949..1571986 1 NC_014738.1 COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: psa:PST_4158 sugar acetylase; PFAM: acyltransferase 3; SPTR: O-antigen acetylase; PFAM: Acyltransferase family; acyltransferase 3 1571986 10002206 Riean_1439 Riemerella anatipestifer ATCC 11845 = DSM 15868 acyltransferase 3 YP_004046102.1 1570949 D 693978 CDS YP_004046103.1 313206926 10002207 1571999..1572799 1 NC_014738.1 COGs: COG3774 Mannosyltransferase OCH1; InterPro IPR007577; KEGG: fba:FIC_01726 mannosyltransferase involved in polysaccharide biosynthesis; PFAM: glycosyltransferase sugar-binding region containing DXD motif; SPTR: Putative mannosyltransferase involved in polysaccharide biosynthesis; PFAM: Glycosyltransferase sugar-binding region containing DXD motif; glycosyltransferase sugar-binding region containing dxd motif 1572799 10002207 Riean_1440 Riemerella anatipestifer ATCC 11845 = DSM 15868 glycosyltransferase sugar-binding region containing dxd motif YP_004046103.1 1571999 D 693978 CDS YP_004046104.1 313206927 10002208 1572805..1573491 1 NC_014738.1 InterPro IPR001509; KEGG: fph:Fphi_1263 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; naD-dependent epimerase/dehydratase 1573491 10002208 Riean_1441 Riemerella anatipestifer ATCC 11845 = DSM 15868 naD-dependent epimerase/dehydratase YP_004046104.1 1572805 D 693978 CDS YP_004046105.1 313206928 10002209 complement(1573479..1574495) 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fba:FIC_02333 LPS biosynthesis related glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Putative LPS biosynthesis related glycosyltransferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1574495 10002209 Riean_1442 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004046105.1 1573479 R 693978 CDS YP_004046106.1 313206929 10002210 1574558..1575085 1 NC_014738.1 COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: fba:FIC_02334 exopolysaccharide biosynthesis protein, acetyltransferase; SPTR: Exopolysaccharide biosynthesis protein, acetyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); exopolysaccharide biosynthesis acetyltransferase 1575085 10002210 Riean_1443 Riemerella anatipestifer ATCC 11845 = DSM 15868 exopolysaccharide biosynthesis acetyltransferase YP_004046106.1 1574558 D 693978 CDS YP_004046107.1 313206930 10002211 1575091..1576062 1 NC_014738.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fba:FIC_02335 glycosyl transferase, family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1576062 10002211 Riean_1444 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004046107.1 1575091 D 693978 CDS YP_004046108.1 313206931 10002212 1576075..1577097 1 NC_014738.1 InterPro IPR001173; KEGG: fba:FIC_02336 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1577097 10002212 Riean_1445 Riemerella anatipestifer ATCC 11845 = DSM 15868 family 2 glycosyl transferase YP_004046108.1 1576075 D 693978 CDS YP_004046109.1 313206932 10002213 complement(1577220..1578179) 1 NC_014738.1 COGs: COG5039 Exopolysaccharide biosynthesis protein; KEGG: pdi:BDI_1412 exopolysaccharide biosynthesis protein, galactosyltransferase; SPTR: Exopolysaccharide biosynthesis protein, galactosyltransferase; PFAM: Polysaccharide pyruvyl transferase; exopolysaccharide biosynthesis galactosyltransferase 1578179 10002213 Riean_1446 Riemerella anatipestifer ATCC 11845 = DSM 15868 exopolysaccharide biosynthesis galactosyltransferase YP_004046109.1 1577220 R 693978 CDS YP_004046110.1 313206933 10002214 1578295..1579728 1 NC_014738.1 COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: gfo:GFO_3263 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1579728 10002214 Riean_1447 Riemerella anatipestifer ATCC 11845 = DSM 15868 polysaccharide biosynthesis protein YP_004046110.1 1578295 D 693978 CDS YP_004046111.1 313206934 10002215 1579810..1580826 1 NC_014738.1 COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835; KEGG: fba:FIC_00223 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidylyltransferase; manually curated; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form; nucleotidyl transferase 1580826 10002215 Riean_1448 Riemerella anatipestifer ATCC 11845 = DSM 15868 nucleotidyl transferase YP_004046111.1 1579810 D 693978 CDS YP_004046112.1 313206935 10002216 1580883..1581683 1 NC_014738.1 KEGG: fba:FIC_00222 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1581683 10002216 Riean_1449 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046112.1 1580883 D 693978 CDS YP_004046113.1 313206936 10002217 1581680..1583233 1 NC_014738.1 COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: fba:FIC_00221 peptidase M23B precursor; PFAM: Peptidase M23; SPTR: M24/M37 family peptidase; PFAM: Peptidase family M23; peptidase m23 1583233 10002217 Riean_1450 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m23 YP_004046113.1 1581680 D 693978 CDS YP_004046114.1 313206937 10002218 1583263..1583445 1 NC_014738.1 InterPro IPR006312: IPR003369; KEGG: fba:FIC_00220 hypothetical protein; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Tat family twin arginine targeting transporter TatA; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin-arginine translocation protein, tata/e family subunit 1583445 10002218 Riean_1451 Riemerella anatipestifer ATCC 11845 = DSM 15868 twin-arginine translocation protein, tata/e family subunit YP_004046114.1 1583263 D 693978 CDS YP_004046115.1 313206938 10002219 1583555..1583752 1 NC_014738.1 InterPro IPR006312: IPR003369; KEGG: coc:Coch_0981 twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Putative uncharacterized protein; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin-arginine translocation protein, tata/e family subunit 1583752 10002219 Riean_1452 Riemerella anatipestifer ATCC 11845 = DSM 15868 twin-arginine translocation protein, tata/e family subunit YP_004046115.1 1583555 D 693978 CDS YP_004046116.1 313206939 10002220 1583777..1584388 1 NC_014738.1 KEGG: fba:FIC_00219 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1584388 10002220 Riean_1453 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046116.1 1583777 D 693978 CDS YP_004046117.1 313206940 10002221 1584381..1584851 1 NC_014738.1 KEGG: fba:FIC_00218 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1584851 10002221 Riean_1454 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046117.1 1584381 D 693978 CDS YP_004046118.1 313206941 10002222 1584866..1585459 1 NC_014738.1 COGs: COG0807 GTP cyclohydrolase II; InterPro IPR000926; KEGG: fba:FIC_00217 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; PRIAM: GTP cyclohydrolase II; SPTR: Possible GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; GTP cyclohydrolase ii 1585459 10002222 Riean_1455 Riemerella anatipestifer ATCC 11845 = DSM 15868 GTP cyclohydrolase ii YP_004046118.1 1584866 D 693978 CDS YP_004046119.1 313206942 10002223 1585586..1587319 1 NC_014738.1 COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764: IPR019800; KEGG: fba:FIC_00213 glycoside hydrolase; PFAM: glycoside hydrolase family 3 domain protein; SPTR: Glycoside hydrolase; PFAM: Glycosyl hydrolase family 3 N terminal domain; glycoside hydrolase 1587319 10002223 Riean_1456 Riemerella anatipestifer ATCC 11845 = DSM 15868 glycoside hydrolase YP_004046119.1 1585586 D 693978 CDS YP_004046120.1 313206943 10002224 1587333..1588466 1 NC_014738.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fba:FIC_00212 glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 1588466 10002224 Riean_1457 Riemerella anatipestifer ATCC 11845 = DSM 15868 group 1 glycosyl transferase YP_004046120.1 1587333 D 693978 CDS YP_004046121.1 313206944 10002225 1588480..1589742 1 NC_014738.1 KEGG: fba:FIC_00211 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2851); hypothetical protein 1589742 10002225 Riean_1458 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046121.1 1588480 D 693978 CDS YP_004046122.1 313206945 10002226 1589750..1589971 1 NC_014738.1 KEGG: fba:FIC_02301 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PspC domain; hypothetical protein 1589971 10002226 Riean_1459 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046122.1 1589750 D 693978 CDS YP_004046123.1 313206946 10002227 1589968..1590489 1 NC_014738.1 InterPro IPR000182; KEGG: fba:FIC_02302 hypothetical protein; SPTR: Acetyltransferase, GNAT family protein; hypothetical protein 1590489 10002227 Riean_1460 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046123.1 1589968 D 693978 CDS YP_004046124.1 313206947 10002228 complement(1590650..1591708) 1 NC_014738.1 KEGG: fba:FIC_02124 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1591708 10002228 Riean_1461 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046124.1 1590650 R 693978 CDS YP_004046125.1 313206948 10002229 complement(1591698..1593176) 1 NC_014738.1 COGs: COG0738 Fucose permease; InterPro IPR001411: IPR011701; KEGG: fjo:Fjoh_4565 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1593176 10002229 Riean_1462 Riemerella anatipestifer ATCC 11845 = DSM 15868 major facilitator superfamily protein YP_004046125.1 1591698 R 693978 CDS YP_004046126.1 313206949 10002230 complement(1593218..1593949) 1 NC_014738.1 COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fba:FIC_02122 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase 1593949 10002230 Riean_1463 Riemerella anatipestifer ATCC 11845 = DSM 15868 phospholipid/glycerol acyltransferase YP_004046126.1 1593218 R 693978 CDS YP_004046127.1 313206950 10002231 complement(1593963..1594421) 1 NC_014738.1 InterPro IPR007267; KEGG: fba:FIC_02121 hypothetical protein; PFAM: GtrA family protein; SPTR: Putative uncharacterized protein; PFAM: GtrA-like protein; gtra family protein 1594421 10002231 Riean_1464 Riemerella anatipestifer ATCC 11845 = DSM 15868 gtra family protein YP_004046127.1 1593963 R 693978 CDS YP_004046128.1 313206951 10002232 1594539..1596671 1 NC_014738.1 InterPro IPR012910: IPR000531; KEGG: fps:FP1510 TonB-dependent outer membrane receptorprecursor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent outer membrane receptorprecursor; tonb-dependent receptor 1596671 10002232 Riean_1465 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004046128.1 1594539 D 693978 CDS YP_004046129.1 313206952 10002233 1596849..1597337 1 NC_014738.1 KEGG: ava:Ava_0364 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1597337 10002233 Riean_1466 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046129.1 1596849 D 693978 CDS YP_004046130.1 313206953 10002234 1597833..1598669 1 NC_014738.1 InterPro IPR004221; KEGG: mar:MAE_08660 type II restriction enzyme EcoRI-like protein; PFAM: restriction endonuclease EcoRI; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type II restriction enzyme EcoRI homolog; PFAM: Restriction endonuclease EcoRI; type ii site-specific deoxyribonuclease 1598669 10002234 Riean_1467 Riemerella anatipestifer ATCC 11845 = DSM 15868 type ii site-specific deoxyribonuclease YP_004046130.1 1597833 D 693978 CDS YP_004046131.1 313206954 10002235 1598680..1599699 1 NC_014738.1 InterPro IPR002052; KEGG: mar:MAE_08670 type II restriction enzyme EcoRI-like protein; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Type II restriction enzyme EcoRI homolog; site-specific DNA-methyltransferase (adenine-specific) 1599699 10002235 Riean_1468 Riemerella anatipestifer ATCC 11845 = DSM 15868 site-specific DNA-methyltransferase (adenine-specific) YP_004046131.1 1598680 D 693978 CDS YP_004046132.1 313206955 10002236 1599878..1600735 1 NC_014738.1 COGs: COG2971 N-acetylglucosamine kinase; KEGG: fba:FIC_02254 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: BadF/BadG/BcrA/BcrD ATPase family; hypothetical protein 1600735 10002236 Riean_1469 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046132.1 1599878 D 693978 CDS YP_004046133.1 313206956 10002237 1600758..1603046 1 NC_014738.1 COGs: COG0281 Malic enzyme; InterPro IPR012301: IPR012302: IPR002505: IPR012188: IPR 015884; KEGG: fba:FIC_02253 NADP-dependent malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; SPTR: NADP-dependent malic enzyme; PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; allosteric nADP-dependent malic enzyme 1603046 10002237 Riean_1470 Riemerella anatipestifer ATCC 11845 = DSM 15868 allosteric nADP-dependent malic enzyme YP_004046133.1 1600758 D 693978 CDS YP_004046134.1 313206957 10002238 complement(1603134..1604528) 1 NC_014738.1 KEGG: fba:FIC_02297 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1604528 10002238 Riean_1471 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046134.1 1603134 R 693978 CDS YP_004046135.1 313206958 10002239 complement(1604583..1604873) 1 NC_014738.1 KEGG: fba:FIC_02298 conserved hypothetical protein; possible transcriptional regulator, MarR/EmrR family; SPTR: Possible transcriptional regulator; transcriptional regulator 1604873 10002239 Riean_1472 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator YP_004046135.1 1604583 R 693978 CDS YP_004046136.1 313206959 10002240 complement(1604900..1605601) 1 NC_014738.1 KEGG: fba:FIC_02299 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1605601 10002240 Riean_1473 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046136.1 1604900 R 693978 CDS YP_004046137.1 313206960 10002241 complement(1605632..1607092) 1 NC_014738.1 COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR000644: IPR005990: IPR001093: IPR018529: IPR 015875; KEGG: fba:FIC_00394 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; PRIAM: IMP dehydrogenase; SMART: CBS domain containing protein; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; inosine-5'-monophosphate dehydrogenase 1607092 10002241 Riean_1474 Riemerella anatipestifer ATCC 11845 = DSM 15868 inosine-5'-monophosphate dehydrogenase YP_004046137.1 1605632 R 693978 CDS YP_004046138.1 313206961 10002242 complement(1607173..1609008) 1 NC_014738.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439: IPR017940: IPR001140: IPR003593: IPR 017871; KEGG: fba:FIC_02386 ABC transporter, ATP-binding protein, MsbA family; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein, MsbA family; PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter 1609008 10002242 Riean_1475 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004046138.1 1607173 R 693978 CDS YP_004046139.1 313206962 10002243 complement(1609142..1609534) 1 NC_014738.1 KEGG: fba:FIC_02384 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1609534 10002243 Riean_1476 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046139.1 1609142 R 693978 CDS YP_004046140.1 313206963 10002244 1609718..1611412 1 NC_014738.1 COGs: COG1158 Transcription termination factor; InterPro IPR004665: IPR011113: IPR000194: IPR011129: IPR 003593; KEGG: fba:FIC_02382 transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; SMART: Cold shock protein; AAA ATPase; SPTR: Transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor rho 1611412 10002244 Riean_1477 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcription termination factor rho YP_004046140.1 1609718 D 693978 CDS YP_004046141.1 313206964 10002245 1611541..1612047 1 NC_014738.1 KEGG: fba:FIC_00171 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1612047 10002245 Riean_1478 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046141.1 1611541 D 693978 CDS YP_004046142.1 313206965 10002246 complement(1612035..1613240) 1 NC_014738.1 KEGG: cag:Cagg_0881 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1613240 10002246 Riean_1479 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046142.1 1612035 R 693978 CDS YP_004046143.1 313206966 10002247 complement(1613638..1614681) 1 NC_014738.1 COGs: COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase); InterPro IPR003431; KEGG: cpi:Cpin_1035 3-phytase; PFAM: phytase; PRIAM: 3-phytase; SPTR: Possible 3-phytase; PFAM: Phytase; 3-phytase 1614681 10002247 Riean_1480 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-phytase YP_004046143.1 1613638 R 693978 CDS YP_004046144.1 313206967 10002248 complement(1614708..1617518) 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR010104: IPR012910: IPR000531; KEGG: fjo:Fjoh_1368 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative TonB-dependent outer membrane receptor protein; TIGRFAM: TonB-dependent receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor; tonb-dependent receptor 1617518 10002248 Riean_1481 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004046144.1 1614708 R 693978 CDS YP_004046145.1 313206968 10002249 complement(1617696..1618448) 1 NC_014738.1 COGs: COG0052 Ribosomal protein S2; InterPro IPR005706: IPR001865: IPR018130; KEGG: fba:FIC_01962 SSU ribosomal protein S2p (SAe); PFAM: ribosomal protein S2; SPTR: 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 1618448 10002249 Riean_1482 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S2 YP_004046145.1 1617696 R 693978 CDS YP_004046146.1 313206969 10002250 complement(1618618..1619004) 1 NC_014738.1 COGs: COG0103 Ribosomal protein S9; InterPro IPR000754: IPR020574; KEGG: fba:FIC_01961 30S ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 1619004 10002250 Riean_1483 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein S9 YP_004046146.1 1618618 R 693978 CDS YP_004046147.1 313206970 10002251 complement(1619008..1619463) 1 NC_014738.1 COGs: COG0102 Ribosomal protein L13; InterPro IPR005823: IPR005822; KEGG: fba:FIC_01960 LSU ribosomal protein L13p (L13Ae); PFAM: ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 1619463 10002251 Riean_1484 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L13 YP_004046147.1 1619008 R 693978 CDS YP_004046148.1 313206971 10002252 complement(1619661..1619987) 1 NC_014738.1 COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR014291: IPR002744; KEGG: fba:FIC_00112 protein of unknown function DUF59; PFAM: protein of unknown function DUF59; SPTR: Putative uncharacterized protein; TIGRFAM: FeS assembly SUF system protein; PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein; fes assembly suf system protein 1619987 10002252 Riean_1485 Riemerella anatipestifer ATCC 11845 = DSM 15868 fes assembly suf system protein YP_004046148.1 1619661 R 693978 CDS YP_004046149.1 313206972 10002253 complement(1620007..1620705) 1 NC_014738.1 InterPro IPR019288; KEGG: fba:FIC_00113 hypothetical protein; PFAM: 3'-5' exonuclease, PolB-like; SPTR: Polysaccharide biosynthesis protein; PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; 3'-5' exonuclease, polb 1620705 10002253 Riean_1486 Riemerella anatipestifer ATCC 11845 = DSM 15868 3'-5' exonuclease, polb YP_004046149.1 1620007 R 693978 CDS YP_004046150.1 313206973 10002254 complement(1620709..1622112) 1 NC_014738.1 COGs: COG2715 Uncharacterized membrane protein required for spore maturation in B.subtilis.; InterPro IPR011642; KEGG: fba:FIC_02478 hypothetical protein; PFAM: nucleoside recognition domain protein; SPTR: Putative uncharacterized protein; PFAM: Nucleoside recognition; nucleoside recognition domain-containing protein 1622112 10002254 Riean_1487 Riemerella anatipestifer ATCC 11845 = DSM 15868 nucleoside recognition domain-containing protein YP_004046150.1 1620709 R 693978 CDS YP_004046151.1 313206974 10002255 1622273..1623583 1 NC_014738.1 COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: fba:FIC_02322 UDP-glucose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 1623583 10002255 Riean_1488 Riemerella anatipestifer ATCC 11845 = DSM 15868 nucleotide sugar dehydrogenase YP_004046151.1 1622273 D 693978 CDS YP_004046152.1 313206975 10002256 complement(1623594..1624331) 1 NC_014738.1 COGs: COG2836 conserved hypothetical protein; KEGG: fba:FIC_00141 heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis CycZ-like domain, possible membrane copper tolerance protein; SPTR: Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein; cytochrome biogenesis protein CycZ 1624331 10002256 Riean_1489 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytochrome biogenesis protein CycZ YP_004046152.1 1623594 R 693978 CDS YP_004046153.1 313206976 10002257 complement(1624322..1624780) 1 NC_014738.1 KEGG: fba:FIC_00142 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: FixH; hypothetical protein 1624780 10002257 Riean_1490 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046153.1 1624322 R 693978 CDS YP_004046154.1 313206977 10002258 complement(1624781..1626223) 1 NC_014738.1 COGs: COG0348 Polyferredoxin; InterPro IPR017896: IPR014116: IPR017900; KEGG: fba:FIC_00143 type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation; SPTR: Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation; TIGRFAM: cytochrome c oxidase accessory protein CcoG; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; cytochrome c oxidase accessory protein ccog 1626223 10002258 Riean_1491 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytochrome c oxidase accessory protein ccog YP_004046154.1 1624781 R 693978 CDS YP_004046155.1 313206978 10002259 complement(1626251..1627129) 1 NC_014738.1 InterPro IPR009056: IPR003088; KEGG: fba:FIC_00144 cytochrome c oxidase subunit CcoP; PFAM: cytochrome c class I; SPTR: Cytochrome c oxidase subunit CcoP; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; cytochrome c class i 1627129 10002259 Riean_1492 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytochrome c class i YP_004046155.1 1626251 R 693978 CDS YP_004046156.1 313206979 10002260 complement(1627136..1627330) 1 NC_014738.1 KEGG: fba:FIC_00145 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cbb3-type cytochrome oxidase component FixQ; hypothetical protein 1627330 10002260 Riean_1493 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046156.1 1627136 R 693978 CDS YP_004046157.1 313206980 10002261 complement(1627360..1629639) 1 NC_014738.1 COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883: IPR009056: IPR004677: IPR003468; KEGG: fba:FIC_00146 cytochrome c oxidase subunit CcoN; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome c oxidase subunit CcoN; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase, cbb3-type, subunit i 1629639 10002261 Riean_1494 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytochrome c oxidase, cbb3-type, subunit i YP_004046157.1 1627360 R 693978 CDS YP_004046158.1 313206981 10002262 complement(1629645..1629827) 1 NC_014738.1 InterPro IPR004714; KEGG: gfo:GFO_1432 cbb3-type cytochrome oxidase maturation protein; PFAM: cytochrome oxidase maturation protein cbb3-type; SPTR: Putative uncharacterized protein; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 1629827 10002262 Riean_1495 Riemerella anatipestifer ATCC 11845 = DSM 15868 cbb3-type cytochrome oxidase maturation protein YP_004046158.1 1629645 R 693978 CDS YP_004046159.1 313206982 10002263 complement(1629943..1632336) 1 NC_014738.1 COGs: COG2217 Cation transport ATPase; InterPro IPR006121: IPR001757: IPR008250: IPR005834: IPR 018303: IPR017871; KEGG: fba:FIC_00148 type cbb3 cytochrome oxidase biogenesis protein CcoI; copper-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Cu(I)-translocating P-type ATPase; PFAM: E1-E2 ATPase; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; e1-e2 ATPase-associated domain-containing protein 1632336 10002263 Riean_1496 Riemerella anatipestifer ATCC 11845 = DSM 15868 e1-e2 ATPase-associated domain-containing protein YP_004046159.1 1629943 R 693978 CDS YP_004046160.1 313206983 10002264 1632426..1633139 1 NC_014738.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR012318: IPR001808; KEGG: fba:FIC_00149 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: Transcriptional regulatory protein; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; transcriptional regulator, crp/fnr family 1633139 10002264 Riean_1497 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, crp/fnr family YP_004046160.1 1632426 D 693978 CDS YP_004046161.1 313206984 10002265 1633160..1633975 1 NC_014738.1 COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: fba:FIC_00150 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; ketopantoate hydroxymethyltransferase 1633975 10002265 Riean_1498 Riemerella anatipestifer ATCC 11845 = DSM 15868 ketopantoate hydroxymethyltransferase YP_004046161.1 1633160 D 693978 CDS YP_004046162.1 313206985 10002266 1633985..1634296 1 NC_014738.1 KEGG: fba:FIC_00151 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1634296 10002266 Riean_1499 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046162.1 1633985 D 693978 CDS YP_004046163.1 313206986 10002267 1634306..1634995 1 NC_014738.1 COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: fba:FIC_00163 ribosomal large subunit pseudouridine synthase D; PFAM: pseudouridine synthase; SPTR: Ribosomal large subunit pseudouridine synthase D; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; ribosomal large subunit pseudouridine synthase d 1634995 10002267 Riean_1500 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribosomal large subunit pseudouridine synthase d YP_004046163.1 1634306 D 693978 CDS YP_004046164.1 313206987 10002268 complement(1635000..1636085) 1 NC_014738.1 InterPro IPR018486; KEGG: fba:FIC_00431 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1636085 10002268 Riean_1501 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046164.1 1635000 R 693978 CDS YP_004046165.1 313206988 10002269 complement(1636093..1636980) 1 NC_014738.1 InterPro IPR000620; KEGG: fba:FIC_00432 predicted permease; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Possible permease; PFAM: EamA-like transporter family; hypothetical protein 1636980 10002269 Riean_1502 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046165.1 1636093 R 693978 CDS YP_004046166.1 313206989 10002270 1637114..1637311 1 NC_014738.1 InterPro IPR001911; KEGG: fba:FIC_00265 SSU ribosomal protein S21p; PFAM: ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein s21p 1637311 10002270 Riean_1503 Riemerella anatipestifer ATCC 11845 = DSM 15868 30S ribosomal protein s21p YP_004046166.1 1637114 D 693978 CDS YP_004046167.1 313206990 10002271 1637404..1638279 1 NC_014738.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: fba:FIC_00266 integrase, site-specific recombinase; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Integrase/recombinase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; integrase family protein 1638279 10002271 Riean_1504 Riemerella anatipestifer ATCC 11845 = DSM 15868 integrase family protein YP_004046167.1 1637404 D 693978 CDS YP_004046168.1 313206991 10002272 1638307..1638597 1 NC_014738.1 KEGG: fba:FIC_00267 ribosome hibernation protein YhbH; SPTR: Ribosome hibernation protein YhbH; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; ribosome hibernation protein yhbh 1638597 10002272 Riean_1505 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribosome hibernation protein yhbh YP_004046168.1 1638307 D 693978 CDS YP_004046169.1 313206992 10002277 1639252..1640274 1 NC_014738.1 COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR005719: IPR012135: IPR001295; KEGG: fjo:Fjoh_2210 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase; PRIAM: Dihydroorotate oxidase; SPTR: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; dihydroorotate dehydrogenase 1640274 10002277 Riean_1506 Riemerella anatipestifer ATCC 11845 = DSM 15868 dihydroorotate dehydrogenase YP_004046169.1 1639252 D 693978 CDS YP_004046170.1 313206993 10002278 1640448..1641635 1 NC_014738.1 COGs: COG0050 GTPase - translation elongation factors; InterPro IPR004541: IPR005225: IPR000795: IPR004161: IPR 004160; KEGG: fba:FIC_00272 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; SPTR: Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor 1a (ef-1a/ef-tu) 1641635 10002278 Riean_1507 Riemerella anatipestifer ATCC 11845 = DSM 15868 translation elongation factor 1a (ef-1a/ef-tu) YP_004046170.1 1640448 D 693978 CDS YP_004046171.1 313206994 10002280 1641805..1642011 1 NC_014738.1 InterPro IPR005807: IPR001901; KEGG: fba:FIC_00274 hypothetical protein; PFAM: protein secE/sec61-gamma protein; SPTR: Putative uncharacterized protein; TIGRFAM: preprotein translocase, SecE subunit; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; preprotein translocase subunit SecE 1642011 10002280 Riean_1508 Riemerella anatipestifer ATCC 11845 = DSM 15868 preprotein translocase subunit SecE YP_004046171.1 1641805 D 693978 CDS YP_004046172.1 313206995 10002281 1642031..1642573 1 NC_014738.1 COGs: COG0250 Transcription antiterminator; InterPro IPR001062: IPR006645: IPR005824; KEGG: fba:FIC_00275 transcription antitermination protein NusG; PFAM: NGN domain-containing protein; KOW domain protein; SMART: NGN domain-containing protein; KOW domain protein; SPTR: Transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription antitermination protein nusg 1642573 10002281 Riean_1509 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcription antitermination protein nusg YP_004046172.1 1642031 D 693978 CDS YP_004046173.1 313206996 10002282 1642801..1643244 1 NC_014738.1 COGs: COG0080 Ribosomal protein L11; InterPro IPR006519: IPR020784: IPR020783: IPR000911; KEGG: fba:FIC_00276 LSU ribosomal protein L11p (L12e); PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 1643244 10002282 Riean_1510 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L11 YP_004046173.1 1642801 D 693978 CDS YP_004046174.1 313206997 10002283 1643256..1643948 1 NC_014738.1 COGs: COG0081 Ribosomal protein L1; InterPro IPR005878: IPR002143; KEGG: fba:FIC_00277 50S ribosomal protein L1; PFAM: ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 1643948 10002283 Riean_1511 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein L1 YP_004046174.1 1643256 D 693978 CDS YP_004046175.1 313206998 10002284 1643962..1644465 1 NC_014738.1 COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: fba:FIC_00278 LSU ribosomal protein L10p (P0); PFAM: ribosomal protein L10; SPTR: LSU ribosomal protein L10p (P0); PFAM: Ribosomal protein L10; 50S ribosomal protein l10p 1644465 10002284 Riean_1512 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l10p YP_004046175.1 1643962 D 693978 CDS YP_004046176.1 313206999 10002285 1644539..1644907 1 NC_014738.1 COGs: COG0222 Ribosomal protein L7/L12; InterPro IPR000206: IPR013823; KEGG: fba:FIC_00279 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein l12p 1644907 10002285 Riean_1513 Riemerella anatipestifer ATCC 11845 = DSM 15868 50S ribosomal protein l12p YP_004046176.1 1644539 D 693978 CDS YP_004046177.1 313207000 10002286 1645048..1646556 1 NC_014738.1 InterPro IPR003367; KEGG: cat:CA2559_00005 transcriptional regulator, AraC family with parallel beta-helix repeat; PFAM: Thrombospondin type 3 repeat-containing protein; SPTR: Thrombospondin type 3 repeat family protein/Calx-beta domain protein; thrombospondin type 3 repeat-containing protein 1646556 10002286 Riean_1514 Riemerella anatipestifer ATCC 11845 = DSM 15868 thrombospondin type 3 repeat-containing protein YP_004046177.1 1645048 D 693978 CDS YP_004046178.1 313207001 10002287 1646572..1647135 1 NC_014738.1 KEGG: pjd:Pjdr2_5849 S-layer domain protein; SPTR: Putative uncharacterized protein; hypothetical protein 1647135 10002287 Riean_1515 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046178.1 1646572 D 693978 CDS YP_004046179.1 313207002 10002288 1647203..1647727 1 NC_014738.1 KEGG: pbe:PB102533.00.0 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1647727 10002288 Riean_1516 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046179.1 1647203 D 693978 CDS YP_004046180.1 313207003 10002289 1647763..1650270 1 NC_014738.1 InterPro IPR000169; KEGG: coc:Coch_1644 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1650270 10002289 Riean_1517 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046180.1 1647763 D 693978 CDS YP_004046181.1 313207004 10002290 1650329..1650895 1 NC_014738.1 KEGG: rno:497227 mucin apoprotein; SPTR: Putative uncharacterized protein; hypothetical protein 1650895 10002290 Riean_1518 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046181.1 1650329 D 693978 CDS YP_004046182.1 313207005 10002291 1651265..1655092 1 NC_014738.1 COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterPro IPR010243: IPR007644: IPR007642: IPR007645: IPR 019462: IPR007120: IPR007641: IPR007121; KEGG: fba:FIC_00280 DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta 1655092 10002291 Riean_1519 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA-directed RNA polymerase subunit beta YP_004046182.1 1651265 D 693978 CDS YP_004046183.1 313207006 10002292 1655175..1659443 1 NC_014738.1 COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; InterPro IPR012754: IPR007080: IPR000722: IPR007066: IPR 007083: IPR007081: IPR006592; KEGG: fba:FIC_00281 DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; SMART: RNA polymerase I subunit A domain protein; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' 1659443 10002292 Riean_1520 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA-directed RNA polymerase subunit beta' YP_004046183.1 1655175 D 693978 CDS YP_004046184.1 313207007 10002293 1659526..1659834 1 NC_014738.1 KEGG: fba:FIC_00282 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3467); hypothetical protein 1659834 10002293 Riean_1521 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046184.1 1659526 D 693978 CDS YP_004046185.1 313207008 10002294 1659912..1662068 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fba:FIC_00970 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent outer membrane receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; tonb-dependent receptor 1662068 10002294 Riean_1522 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004046185.1 1659912 D 693978 CDS YP_004046186.1 313207009 10002295 1662171..1664048 1 NC_014738.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439: IPR003593; KEGG: fba:FIC_01833 ABC superfamily ATP binding cassette transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter; ABC transporter 1664048 10002295 Riean_1523 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004046186.1 1662171 D 693978 CDS YP_004046187.1 313207010 10002296 1664106..1664675 1 NC_014738.1 KEGG: cpi:Cpin_1613 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1664675 10002296 Riean_1524 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046187.1 1664106 D 693978 CDS YP_004046188.1 313207011 10002297 1664821..1665471 1 NC_014738.1 COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: fba:FIC_00665 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 1665471 10002297 Riean_1525 Riemerella anatipestifer ATCC 11845 = DSM 15868 uracil phosphoribosyltransferase YP_004046188.1 1664821 D 693978 CDS YP_004046189.1 313207012 10002298 1665576..1666376 1 NC_014738.1 COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376: IPR001753; KEGG: fba:FIC_02219 enoyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase; PFAM: Enoyl-CoA hydratase/isomerase family; enoyl-CoA hydratase/isomerase 1666376 10002298 Riean_1526 Riemerella anatipestifer ATCC 11845 = DSM 15868 enoyl-CoA hydratase/isomerase YP_004046189.1 1665576 D 693978 CDS YP_004046190.1 313207013 10002299 1666412..1667272 1 NC_014738.1 COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527: IPR013551; KEGG: fba:FIC_00309 hypothetical protein; PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; SPTR: Putative uncharacterized protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255; yicc-like domain-containing protein 1667272 10002299 Riean_1527 Riemerella anatipestifer ATCC 11845 = DSM 15868 yicc-like domain-containing protein YP_004046190.1 1666412 D 693978 CDS YP_004046191.1 313207014 10002300 1667295..1667855 1 NC_014738.1 COGs: COG0194 Guanylate kinase; InterPro IPR020590: IPR008144: IPR017665: IPR008145; KEGG: fba:FIC_00308 guanylate kinase; PFAM: guanylate kinase; PRIAM: Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: Guanylate kinase; TIGRFAM: guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase 1667855 10002300 Riean_1528 Riemerella anatipestifer ATCC 11845 = DSM 15868 guanylate kinase YP_004046191.1 1667295 D 693978 CDS YP_004046192.1 313207015 10002301 1667855..1668304 1 NC_014738.1 KEGG: fba:FIC_00306 quinolinate synthetase; SPTR: Quinolinate synthetase; PFAM: Quinolinate synthetase A protein; hypothetical protein 1668304 10002301 Riean_1529 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046192.1 1667855 D 693978 CDS YP_004046193.1 313207016 10002302 1668311..1668673 1 NC_014738.1 COGs: COG1539 Dihydroneopterin aldolase; InterPro IPR006157: IPR006156; KEGG: fba:FIC_00305 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; SPTR: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; dihydroneopterin aldolase 1668673 10002302 Riean_1530 Riemerella anatipestifer ATCC 11845 = DSM 15868 dihydroneopterin aldolase YP_004046193.1 1668311 D 693978 CDS YP_004046194.1 313207017 10002303 1668782..1669159 1 NC_014738.1 COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); InterPro IPR003016: IPR002930: IPR017453; KEGG: fba:FIC_02072 glycine cleavage system H protein; PFAM: glycine cleavage H-protein; SPTR: Glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; glycine cleavage system h protein 1669159 10002303 Riean_1531 Riemerella anatipestifer ATCC 11845 = DSM 15868 glycine cleavage system h protein YP_004046194.1 1668782 D 693978 CDS YP_004046195.1 313207018 10002304 1669188..1669508 1 NC_014738.1 KEGG: rmr:Rmar_0460 VanZ family protein; SPTR: Putative uncharacterized protein; PFAM: VanZ like family; hypothetical protein 1669508 10002304 Riean_1532 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046195.1 1669188 D 693978 CDS YP_004046196.1 313207019 10002305 1669979..1670176 1 NC_014738.1 KEGG: pop:POPTR_865607 hypothetical protein; SPTR: Predicted protein; hypothetical protein 1670176 10002305 Riean_1533 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046196.1 1669979 D 693978 CDS YP_004046197.1 313207020 10002306 1670213..1670419 1 NC_014738.1 KEGG: lbf:LBF_2285 ATP-dependent protease peptidase subunit; ATP-dependent protease peptidase subunit 1670419 10002306 Riean_1534 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-dependent protease peptidase subunit YP_004046197.1 1670213 D 693978 CDS YP_004046198.1 313207021 10002307 1670445..1670693 1 NC_014738.1 KEGG: vvu:VV1_2299 ABC transporter ATP-binding protein; SPTR: Putative ATP-binding component of a transport system; hypothetical protein 1670693 10002307 Riean_1535 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046198.1 1670445 D 693978 CDS YP_004046199.1 313207022 10002308 1670697..1672877 1 NC_014738.1 KEGG: pyo:PY05054 rhoptry protein; SPTR: Putative uncharacterized protein; hypothetical protein 1672877 10002308 Riean_1536 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046199.1 1670697 D 693978 CDS YP_004046200.1 313207023 10002309 1672962..1674008 1 NC_014738.1 KEGG: ddf:DEFDS_1321 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1674008 10002309 Riean_1537 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046200.1 1672962 D 693978 CDS YP_004046201.1 313207024 10002310 complement(1674003..1674605) 1 NC_014738.1 KEGG: mlo:mll4674 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uracil DNA glycosylase superfamily; hypothetical protein 1674605 10002310 Riean_1538 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046201.1 1674003 R 693978 CDS YP_004046202.1 313207025 10002311 1674725..1675438 1 NC_014738.1 KEGG: fps:FP0822 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1675438 10002311 Riean_1539 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046202.1 1674725 D 693978 CDS YP_004046203.1 313207026 10002312 1675457..1675981 1 NC_014738.1 InterPro IPR001736; KEGG: fsu:Fisuc_1069 phospholipase D/transphosphatidylase; SPTR: Phospholipase domain-containing protein; phospholipase d/transphosphatidylase 1675981 10002312 Riean_1540 Riemerella anatipestifer ATCC 11845 = DSM 15868 phospholipase d/transphosphatidylase YP_004046203.1 1675457 D 693978 CDS YP_004046204.1 313207027 10002313 1676034..1676945 1 NC_014738.1 KEGG: gfo:GFO_2571 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1676945 10002313 Riean_1541 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046204.1 1676034 D 693978 CDS YP_004046205.1 313207028 10002319 complement(1682878..1684995) 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fba:FIC_00159 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Probable TonB-dependent transmembrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor 1684995 10002319 Riean_1542 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004046205.1 1682878 R 693978 CDS YP_004046206.1 313207029 10002320 complement(1685243..1686712) 1 NC_014738.1 COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394: IPR007046: IPR007634; KEGG: fba:FIC_01828 RNA polymerase sigma-54 factor RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; SPTR: DNA-directed RNA polymerase sigma subunit SigL; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase, sigma 54 subunit, rpon/sigl 1686712 10002320 Riean_1543 Riemerella anatipestifer ATCC 11845 = DSM 15868 RNA polymerase, sigma 54 subunit, rpon/sigl YP_004046206.1 1685243 R 693978 CDS YP_004046207.1 313207030 10002321 complement(1686715..1688163) 1 NC_014738.1 COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; InterPro IPR002312: IPR004365: IPR004364: IPR006195: IPR 004522; KEGG: fba:FIC_01829 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: Asparagine--tRNA ligase; SPTR: Asparagine--tRNA ligase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; asparaginyl-tRNA synthetase 1688163 10002321 Riean_1544 Riemerella anatipestifer ATCC 11845 = DSM 15868 asparaginyl-tRNA synthetase YP_004046207.1 1686715 R 693978 CDS YP_004046208.1 313207031 10002322 complement(1688328..1689608) 1 NC_014738.1 COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: fba:FIC_00447 4-hydroxybutyrate coenzyme A transferase; PFAM: acetyl-CoA hydrolase/transferase; SPTR: 4-hydroxybutyrate coenzyme A transferase; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; acetyl-CoA hydrolase/transferase 1689608 10002322 Riean_1545 Riemerella anatipestifer ATCC 11845 = DSM 15868 acetyl-CoA hydrolase/transferase YP_004046208.1 1688328 R 693978 CDS YP_004046209.1 313207032 10002323 complement(1689635..1690798) 1 NC_014738.1 COGs: COG3508 Homogentisate 1 2-dioxygenase; InterPro IPR005708; KEGG: fba:FIC_00449 homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase; SPTR: Homogentisate 1,2-dioxygenase; PFAM: homogentisate 1,2-dioxygenase; homogentisate 12-dioxygenase 1690798 10002323 Riean_1546 Riemerella anatipestifer ATCC 11845 = DSM 15868 homogentisate 12-dioxygenase YP_004046209.1 1689635 R 693978 CDS YP_004046210.1 313207033 10002324 1691475..1692161 1 NC_014738.1 KEGG: nve:NEMVE_v1g225509 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1692161 10002324 Riean_1547 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046210.1 1691475 D 693978 CDS YP_004046211.1 313207034 10002325 1692189..1693517 1 NC_014738.1 InterPro IPR001304; KEGG: zpr:ZPR_2098 Hep_Hag family protein; SPTR: Putative uncharacterized protein; hypothetical protein 1693517 10002325 Riean_1548 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046211.1 1692189 D 693978 CDS YP_004046212.1 313207035 10002326 1693539..1694258 1 NC_014738.1 KEGG: bfs:BF0090 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1694258 10002326 Riean_1549 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046212.1 1693539 D 693978 CDS YP_004046213.1 313207036 10002327 complement(1697005..1697541) 1 NC_014738.1 KEGG: pgn:PGN_1622 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1697541 10002327 Riean_1550 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046213.1 1697005 R 693978 CDS YP_004046214.1 313207037 10002328 complement(1697548..1700835) 1 NC_014738.1 KEGG: pgn:PGN_1623 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1700835 10002328 Riean_1551 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046214.1 1697548 R 693978 CDS YP_004046215.1 313207038 10002329 complement(1700967..1702016) 1 NC_014738.1 COGs: COG0837 Glucokinase; InterPro IPR003836; KEGG: fba:FIC_01474 glucokinase; PFAM: Glucokinase; PRIAM: Glucokinase; SPTR: Glucokinase; PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; glucokinase 1702016 10002329 Riean_1552 Riemerella anatipestifer ATCC 11845 = DSM 15868 glucokinase YP_004046215.1 1700967 R 693978 CDS YP_004046216.1 313207039 10002330 1702182..1704785 1 NC_014738.1 COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR018164: IPR012947: IPR003156: IPR018165: IPR 002318; KEGG: fba:FIC_00507 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; SPTR: Alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase 1704785 10002330 Riean_1553 Riemerella anatipestifer ATCC 11845 = DSM 15868 alanyl-tRNA synthetase YP_004046216.1 1702182 D 693978 CDS YP_004046217.1 313207040 10002331 complement(1704881..1706248) 1 NC_014738.1 InterPro IPR015391: IPR000297; KEGG: fba:FIC_00458 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; ppic-type peptidyl-prolyl cis-trans isomerase 1706248 10002331 Riean_1554 Riemerella anatipestifer ATCC 11845 = DSM 15868 ppic-type peptidyl-prolyl cis-trans isomerase YP_004046217.1 1704881 R 693978 CDS YP_004046218.1 313207041 10002332 complement(1706345..1707265) 1 NC_014738.1 COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002173: IPR011611; KEGG: fba:FIC_00460 ribokinase; PFAM: PfkB domain protein; SPTR: PfkB family carbohydrate kinase; PFAM: pfkB family carbohydrate kinase; pfkb domain-containing protein 1707265 10002332 Riean_1555 Riemerella anatipestifer ATCC 11845 = DSM 15868 pfkb domain-containing protein YP_004046218.1 1706345 R 693978 CDS YP_004046219.1 313207042 10002333 complement(1707291..1707854) 1 NC_014738.1 InterPro IPR019850; KEGG: fba:FIC_00461 GldD; SPTR: Gliding motility protein GldD family protein; TIGRFAM: gliding motility-associated lipoprotein GldD; TIGRFAM: gliding motility-associated lipoprotein GldD; gliding motility protein GldD 1707854 10002333 Riean_1556 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein GldD YP_004046219.1 1707291 R 693978 CDS YP_004046220.1 313207043 10002334 complement(1707899..1708939) 1 NC_014738.1 COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265: IPR003651: IPR005760; KEGG: fba:FIC_00462 A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop; SPTR: Possible A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 1708939 10002334 Riean_1557 Riemerella anatipestifer ATCC 11845 = DSM 15868 A/G-specific adenine glycosylase YP_004046220.1 1707899 R 693978 CDS YP_004046221.1 313207044 10002335 1708986..1709279 1 NC_014738.1 COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: fba:FIC_00463 DNA-binding protein HU; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: DNA-binding protein HU-beta; PFAM: Bacterial DNA-binding protein; histone family protein DNA-binding protein 1709279 10002335 Riean_1558 Riemerella anatipestifer ATCC 11845 = DSM 15868 histone family protein DNA-binding protein YP_004046221.1 1708986 D 693978 CDS YP_004046222.1 313207045 10002336 1709503..1711062 1 NC_014738.1 COGs: COG1530 Ribonuclease G and E; InterPro IPR003029: IPR019307: IPR004659; KEGG: fba:FIC_00464 cytoplasmic axial filament protein CafA and ribonuclease G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; PRIAM: Ribonuclease E; SPTR: Bifunctional ribonuclease G/cytoplasmic axial filament protein; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease, rne/rng family 1711062 10002336 Riean_1559 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribonuclease, rne/rng family YP_004046222.1 1709503 D 693978 CDS YP_004046223.1 313207046 10002337 1711210..1713780 1 NC_014738.1 InterPro IPR018087; KEGG: fjo:Fjoh_4670 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1713780 10002337 Riean_1560 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046223.1 1711210 D 693978 CDS YP_004046224.1 313207047 10002338 1713801..1716872 1 NC_014738.1 InterPro IPR012910: IPR000531; KEGG: fjo:Fjoh_4671 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor plug 1716872 10002338 Riean_1561 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004046224.1 1713801 D 693978 CDS YP_004046225.1 313207048 10002339 1716897..1718213 1 NC_014738.1 InterPro IPR000276: IPR012944; KEGG: fjo:Fjoh_4672 RagB/SusD domain-containing protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family; ragb/susd domain-containing protein 1718213 10002339 Riean_1562 Riemerella anatipestifer ATCC 11845 = DSM 15868 ragb/susd domain-containing protein YP_004046225.1 1716897 D 693978 CDS YP_004046226.1 313207049 10002340 complement(1718290..1718592) 1 NC_014738.1 KEGG: pkn:PKH_146920 DEAD/DEAH box helicase (fragment); SPTR: M protein; hypothetical protein 1718592 10002340 Riean_1563 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046226.1 1718290 R 693978 CDS YP_004046227.1 313207050 10002341 complement(1718582..1719640) 1 NC_014738.1 COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006224: IPR002942: IPR006145: IPR006225; KEGG: fba:FIC_00312 ribosomal large subunit pseudouridine synthase D; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; ribosomal large subunit pseudouridine synthase d 1719640 10002341 Riean_1564 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribosomal large subunit pseudouridine synthase d YP_004046227.1 1718582 R 693978 CDS YP_004046228.1 313207051 10002342 complement(1719703..1720737) 1 NC_014738.1 COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: fba:FIC_00311 hypothetical protein; PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein; SPTR: Putative uncharacterized protein; PFAM: PASTA domain; pasta domain containing protein 1720737 10002342 Riean_1565 Riemerella anatipestifer ATCC 11845 = DSM 15868 pasta domain containing protein YP_004046228.1 1719703 R 693978 CDS YP_004046229.1 313207052 10002343 complement(1720846..1723980) 1 NC_014738.1 COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212: IPR014016: IPR014017; KEGG: fba:FIC_00264 ATP-dependent helicase; PFAM: UvrD/REP helicase; SPTR: ATP-dependent helicase; PFAM: UvrD/REP helicase; uvrd/rep helicase 1723980 10002343 Riean_1566 Riemerella anatipestifer ATCC 11845 = DSM 15868 uvrd/rep helicase YP_004046229.1 1720846 R 693978 CDS YP_004046230.1 313207053 10002344 1724106..1724930 1 NC_014738.1 COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: fps:FP0722 TerC family membrane protein; PFAM: Integral membrane protein TerC; SPTR: Membrane protein, TerC family; PFAM: Integral membrane protein TerC family; integral membrane protein terc 1724930 10002344 Riean_1567 Riemerella anatipestifer ATCC 11845 = DSM 15868 integral membrane protein terc YP_004046230.1 1724106 D 693978 CDS YP_004046231.1 313207054 10002345 1725177..1726298 1 NC_014738.1 COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR000422: IPR000926: IPR016299; KEGG: fba:FIC_00284 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; SPTR: 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1726298 10002345 Riean_1568 Riemerella anatipestifer ATCC 11845 = DSM 15868 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004046231.1 1725177 D 693978 CDS YP_004046232.1 313207055 10002347 1726724..1728052 1 NC_014738.1 COGs: COG1257 Hydroxymethylglutaryl-CoA reductase; InterPro IPR002202: IPR004553; KEGG: fba:FIC_02280 hydroxymethylglutaryl-CoA reductase; PRIAM: Hydroxymethylglutaryl-CoA reductase; SPTR: Possible hydroxymethylglutaryl-CoA reductase (NADPH); TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; PFAM: Hydroxymethylglutaryl-coenzyme A reductase; TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; hydroxymethylglutaryl-CoA reductase, degradative 1728052 10002347 Riean_1569 Riemerella anatipestifer ATCC 11845 = DSM 15868 hydroxymethylglutaryl-CoA reductase, degradative YP_004046232.1 1726724 D 693978 CDS YP_004046233.1 313207056 10002348 1728060..1728449 1 NC_014738.1 COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: fba:FIC_02278 protein of hypothetical function DUF423; PFAM: protein of unknown function DUF423; SPTR: Protein of hypothetical function DUF423; PFAM: Protein of unknown function (DUF423); hypothetical protein 1728449 10002348 Riean_1570 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046233.1 1728060 D 693978 CDS YP_004046234.1 313207057 10002349 1728535..1729725 1 NC_014738.1 COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterPro IPR017866: IPR013650: IPR005811: IPR011761: IPR 005809; KEGG: fba:FIC_02276 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta 1729725 10002349 Riean_1571 Riemerella anatipestifer ATCC 11845 = DSM 15868 succinyl-CoA synthetase subunit beta YP_004046234.1 1728535 D 693978 CDS YP_004046235.1 313207058 10002350 complement(1729821..1731068) 1 NC_014738.1 COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fba:FIC_00154 penicillin-binding protein 4*; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase; beta-lactamase 1731068 10002350 Riean_1572 Riemerella anatipestifer ATCC 11845 = DSM 15868 beta-lactamase YP_004046235.1 1729821 R 693978 CDS YP_004046236.1 313207059 10002351 complement(1731080..1732012) 1 NC_014738.1 COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: fba:FIC_00155 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein 1732012 10002351 Riean_1573 Riemerella anatipestifer ATCC 11845 = DSM 15868 D-isomer specific 2-hydroxyacid dehydrogenase naD-binding protein YP_004046236.1 1731080 R 693978 CDS YP_004046237.1 313207060 10002352 complement(1732019..1732528) 1 NC_014738.1 COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: fba:FIC_00156 acyl-CoA thioester hydrolase; PFAM: thioesterase superfamily protein; SPTR: Acyl-CoA thioester hydrolase; PFAM: Thioesterase superfamily; thioesterase superfamily protein 1732528 10002352 Riean_1574 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioesterase superfamily protein YP_004046237.1 1732019 R 693978 CDS YP_004046238.1 313207061 10002353 complement(1732530..1733210) 1 NC_014738.1 KEGG: fba:FIC_00157 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1733210 10002353 Riean_1575 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046238.1 1732530 R 693978 CDS YP_004046239.1 313207062 10002354 complement(1733304..1734461) 1 NC_014738.1 COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fjo:Fjoh_1496 cystathionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Possible methionine gamma-lyase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase; cys/met metabolism pyridoxal-phosphate-dependent protein 1734461 10002354 Riean_1576 Riemerella anatipestifer ATCC 11845 = DSM 15868 cys/met metabolism pyridoxal-phosphate-dependent protein YP_004046239.1 1733304 R 693978 CDS YP_004046240.1 313207063 10002355 complement(1734474..1736012) 1 NC_014738.1 COGs: COG0460 Homoserine dehydrogenase; InterPro IPR019811: IPR005106: IPR001342; KEGG: zpr:ZPR_3623 aspartokinase I/homoserine dehydrogenase, threonine-sensitive; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; PRIAM: Homoserine dehydrogenase; SPTR: Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; homoserine dehydrogenase 1736012 10002355 Riean_1577 Riemerella anatipestifer ATCC 11845 = DSM 15868 homoserine dehydrogenase YP_004046240.1 1734474 R 693978 CDS YP_004046241.1 313207064 10002356 complement(1736034..1736972) 1 NC_014738.1 COGs: COG2021 Homoserine acetyltransferase; InterPro IPR000073; KEGG: rbi:RB2501_03150 bifunctional aspartokinase I/homeserine dehydrogenase I; PFAM: alpha/beta hydrolase fold; PRIAM: Homoserine O-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; homoserine o-acetyltransferase 1736972 10002356 Riean_1578 Riemerella anatipestifer ATCC 11845 = DSM 15868 homoserine o-acetyltransferase YP_004046241.1 1736034 R 693978 CDS YP_004046242.1 313207065 10002357 1737274..1738257 1 NC_014738.1 COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterPro IPR000291: IPR011127: IPR011095: IPR011761: IPR 005905; KEGG: fba:FIC_02185 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: D-alanine--D-alanine ligase; manually curated; PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 1738257 10002357 Riean_1579 Riemerella anatipestifer ATCC 11845 = DSM 15868 D-alanine--D-alanine ligase YP_004046242.1 1737274 D 693978 CDS YP_004046243.1 313207066 10002358 1738264..1738722 1 NC_014738.1 COGs: COG0669 Phosphopantetheine adenylyltransferase; InterPro IPR001980: IPR004820: IPR004821; KEGG: fba:FIC_02184 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; pantetheine-phosphate adenylyltransferase 1738722 10002358 Riean_1580 Riemerella anatipestifer ATCC 11845 = DSM 15868 pantetheine-phosphate adenylyltransferase YP_004046243.1 1738264 D 693978 CDS YP_004046244.1 313207067 10002359 1738751..1739368 1 NC_014738.1 COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: fba:FIC_02183 YadS protein; PFAM: Uncharacterised protein family UPF0126; SPTR: YadS protein; PFAM: UPF0126 domain; hypothetical protein 1739368 10002359 Riean_1581 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046244.1 1738751 D 693978 CDS YP_004046245.1 313207068 10002360 1739508..1740035 1 NC_014738.1 KEGG: fba:FIC_01781 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Plasmid pRiA4b ORF-3-like protein; hypothetical protein 1740035 10002360 Riean_1582 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046245.1 1739508 D 693978 CDS YP_004046246.1 313207069 10002361 complement(1740142..1741371) 1 NC_014738.1 COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: fba:FIC_00719 YzbB; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Probable lipoprotein; PFAM: Protein of unknown function (DUF1343); hypothetical protein 1741371 10002361 Riean_1583 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046246.1 1740142 R 693978 CDS YP_004046247.1 313207070 10002362 1741377..1742606 1 NC_014738.1 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fba:FIC_00718 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: ABC family transporter, permease protein; PFAM: Predicted permease; hypothetical protein 1742606 10002362 Riean_1584 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046247.1 1741377 D 693978 CDS YP_004046248.1 313207071 10002363 1742654..1743484 1 NC_014738.1 COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR010456: IPR004498; KEGG: fba:FIC_01645 ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; SPTR: Ribosomal protein L11 methyltransferase; PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; (50S ribosomal protein l11p)-lysine n-methyltransferase 1743484 10002363 Riean_1585 Riemerella anatipestifer ATCC 11845 = DSM 15868 (50S ribosomal protein l11p)-lysine n-methyltransferase YP_004046248.1 1742654 D 693978 CDS YP_004046249.1 313207072 10002364 1743518..1744528 1 NC_014738.1 COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR006168: IPR011128: IPR006109; KEGG: fba:FIC_01622 glycerol-3-phosphate dehydrogenase (NAD(P)+); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 1744528 10002364 Riean_1586 Riemerella anatipestifer ATCC 11845 = DSM 15868 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_004046249.1 1743518 D 693978 CDS YP_004046250.1 313207073 10002365 1744720..1745217 1 NC_014738.1 InterPro IPR000182; KEGG: fjo:Fjoh_4884 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; Gcn5-like N-acetyltransferase 1745217 10002365 Riean_1587 Riemerella anatipestifer ATCC 11845 = DSM 15868 Gcn5-like N-acetyltransferase YP_004046250.1 1744720 D 693978 CDS YP_004046251.1 313207074 10002366 complement(1745262..1745546) 1 NC_014738.1 COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: fba:FIC_01476 phage shock protein E; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Phage shock protein E; PFAM: Rhodanese-like domain; rhodanese domain-containing protein 1745546 10002366 Riean_1588 Riemerella anatipestifer ATCC 11845 = DSM 15868 rhodanese domain-containing protein YP_004046251.1 1745262 R 693978 CDS YP_004046252.1 313207075 10002367 1745640..1746578 1 NC_014738.1 COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR017900: IPR013542: IPR017896; KEGG: fba:FIC_01477 iron-sulfur cluster-binding protein; PFAM: domain of unknown function DUF1730; SPTR: Probable iron-sulfur cluster-binding protein; PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; hypothetical protein 1746578 10002367 Riean_1589 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046252.1 1745640 D 693978 CDS YP_004046253.1 313207076 10002368 1746811..1747488 1 NC_014738.1 InterPro IPR011727; KEGG: fba:FIC_01478 hypothetical protein; PFAM: Conserved hypothetical protein CHP02117; SPTR: Probable urease-associated protein; PFAM: Protein of unknown function (DUF2459); TIGRFAM: conserved hypothetical protein; hypothetical protein 1747488 10002368 Riean_1590 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046253.1 1746811 D 693978 CDS YP_004046254.1 313207077 10002369 complement(1747492..1748322) 1 NC_014738.1 COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: fba:FIC_01621 peptidase M23B; PFAM: Peptidase M23; SPTR: Peptidase M23B; PFAM: Peptidase family M23; peptidase m23 1748322 10002369 Riean_1591 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m23 YP_004046254.1 1747492 R 693978 CDS YP_004046255.1 313207078 10002370 1748528..1749223 1 NC_014738.1 KEGG: fps:FP2138 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1749223 10002370 Riean_1592 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046255.1 1748528 D 693978 CDS YP_004046256.1 313207079 10002371 1749248..1749982 1 NC_014738.1 InterPro IPR008271; KEGG: cpi:Cpin_6432 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1749982 10002371 Riean_1593 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046256.1 1749248 D 693978 CDS YP_004046257.1 313207080 10002372 1749995..1751947 1 NC_014738.1 KEGG: chu:CHU_2139 CHU large protein, SAP or adhesin AidA-related; SPTR: Putative uncharacterized protein; hypothetical protein 1751947 10002372 Riean_1594 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046257.1 1749995 D 693978 CDS YP_004046258.1 313207081 10002373 1751947..1761084 1 NC_014738.1 COGs: COG3209 Rhs family protein; InterPro IPR006530; KEGG: hoh:Hoch_2925 YD repeat protein; SPTR: Putative uncharacterized protein; TIGRFAM: YD repeat protein; PFAM: Insecticide toxin TcdB middle/N-terminal region; Salmonella virulence plasmid 65kDa B protein; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); yd repeat protein 1761084 10002373 Riean_1595 Riemerella anatipestifer ATCC 11845 = DSM 15868 yd repeat protein YP_004046258.1 1751947 D 693978 CDS YP_004046259.1 313207082 10002374 1761093..1761350 1 NC_014738.1 KEGG: tet:TTHERM_01132880 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1761350 10002374 Riean_1596 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046259.1 1761093 D 693978 CDS YP_004046260.1 313207083 10002375 1761491..1762189 1 NC_014738.1 COGs: COG1662 Transposase and inactivated derivatives IS1 family; InterPro IPR003220: IPR005063; KEGG: fjo:Fjoh_3693 IS1 transposase; PFAM: IS1 transposase; Insertion element protein; SPTR: IS1 transposase; PFAM: IS1 transposase; Insertion element protein; is1 transposase 1762189 10002375 Riean_1597 Riemerella anatipestifer ATCC 11845 = DSM 15868 is1 transposase YP_004046260.1 1761491 D 693978 CDS YP_004046261.1 313207084 10002376 1762199..1762396 1 NC_014738.1 SPTR: Putative uncharacterized protein; hypothetical protein 1762396 10002376 Riean_1598 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046261.1 1762199 D 693978 CDS YP_004046262.1 313207085 10002377 complement(1762798..1767609) 1 NC_014738.1 InterPro IPR003593; KEGG: zpr:ZPR_2096 ATPase; SMART: AAA ATPase; SPTR: ATPase involved in DNA repair; PFAM: ATPase family associated with various cellular activities (AAA); ATPase involved in DNA repair; AAA ATPase 1767609 10002377 Riean_1599 Riemerella anatipestifer ATCC 11845 = DSM 15868 AAA ATPase YP_004046262.1 1762798 R 693978 CDS YP_004046263.1 313207086 10002378 complement(1767705..1769717) 1 NC_014738.1 COGs: COG2268 conserved hypothetical protein; InterPro IPR001107; KEGG: zpr:ZPR_2095 SPFH domain / band 7 family protein; PFAM: band 7 protein; SPTR: Band 7 protein; hypothetical protein 1769717 10002378 Riean_1600 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046263.1 1767705 R 693978 CDS YP_004046264.1 313207087 10002379 complement(1769769..1770422) 1 NC_014738.1 KEGG: gfo:GFO_2639 membrane protein; SPTR: Putative uncharacterized protein; membrane protein 1770422 10002379 Riean_1601 Riemerella anatipestifer ATCC 11845 = DSM 15868 membrane protein YP_004046264.1 1769769 R 693978 CDS YP_004046265.1 313207088 10002380 complement(1770429..1771130) 1 NC_014738.1 COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: gfo:GFO_2640 PspA/IM30 family protein; PFAM: PspA/IM30 family protein; SPTR: Phage shock protein A, PspA; PFAM: PspA/IM30 family; phage shock protein a, pspa 1771130 10002380 Riean_1602 Riemerella anatipestifer ATCC 11845 = DSM 15868 phage shock protein a, pspa YP_004046265.1 1770429 R 693978 CDS YP_004046266.1 313207089 10002381 complement(1771207..1771608) 1 NC_014738.1 KEGG: gfo:GFO_2641 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1771608 10002381 Riean_1603 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046266.1 1771207 R 693978 CDS YP_004046267.1 313207090 10002382 1771724..1772320 1 NC_014738.1 InterPro IPR001387; KEGG: zpr:ZPR_2091 prophage LambdaCh01, repressor protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 1772320 10002382 Riean_1604 Riemerella anatipestifer ATCC 11845 = DSM 15868 helix-turn-helix domain-containing protein YP_004046267.1 1771724 D 693978 CDS YP_004046268.1 313207091 10002383 complement(1772317..1774326) 1 NC_014738.1 COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterPro IPR018239: IPR013839: IPR004150: IPR004149: IPR 000445: IPR001357: IPR001679: IPR013840: IPR003583; KEGG: fba:FIC_01384 DNA ligase; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; SPTR: DNA ligase (NAD(+)); TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase C4 zinc finger domain; TIGRFAM: DNA ligase, NAD-dependent; DNA ligase, naD-dependent 1774326 10002383 Riean_1605 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA ligase, naD-dependent YP_004046268.1 1772317 R 693978 CDS YP_004046269.1 313207092 10002384 1774495..1774662 1 NC_014738.1 KEGG: lwe:lwe2245 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1774662 10002384 Riean_1606 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046269.1 1774495 D 693978 CDS YP_004046270.1 313207093 10002385 1775363..1778104 1 NC_014738.1 COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: gfo:GFO_2521 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor, plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor 1778104 10002385 Riean_1607 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004046270.1 1775363 D 693978 CDS YP_004046271.1 313207094 10002386 1778287..1779687 1 NC_014738.1 COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR018456: IPR000109: IPR005279; KEGG: coc:Coch_1058 amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; SPTR: Amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial; amino acid/peptide transporter 1779687 10002386 Riean_1608 Riemerella anatipestifer ATCC 11845 = DSM 15868 amino acid/peptide transporter YP_004046271.1 1778287 D 693978 CDS YP_004046272.1 313207095 10002387 1779797..1780333 1 NC_014738.1 InterPro IPR017937: IPR013766: IPR017936; KEGG: fba:FIC_01454 hypothetical protein; PFAM: Thioredoxin domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255; thioredoxin domain-containing protein 1780333 10002387 Riean_1609 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioredoxin domain-containing protein YP_004046272.1 1779797 D 693978 CDS YP_004046273.1 313207096 10002388 1780832..1782085 1 NC_014738.1 InterPro IPR010870; KEGG: gfo:GFO_3192 phosphate-selective porin O and P; PFAM: phosphate-selective porin O and P; SPTR: Phosphate-selective porin O and P; PFAM: Phosphate-selective porin O and P; phosphate-selective porin o and p 1782085 10002388 Riean_1610 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphate-selective porin o and p YP_004046273.1 1780832 D 693978 CDS YP_004046274.1 313207097 10002389 1782105..1782590 1 NC_014738.1 InterPro IPR001887: IPR000026; KEGG: fba:FIC_01787 ribonuclease; PFAM: guanine-specific ribonuclease N1 and T1; SPTR: Probable ribonuclease; PFAM: ribonuclease; guanine-specific ribonuclease n1 and t1 1782590 10002389 Riean_1611 Riemerella anatipestifer ATCC 11845 = DSM 15868 guanine-specific ribonuclease n1 and t1 YP_004046274.1 1782105 D 693978 CDS YP_004046275.1 313207098 10002390 complement(1782656..1783225) 1 NC_014738.1 KEGG: fba:FIC_02182 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1783225 10002390 Riean_1612 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046275.1 1782656 R 693978 CDS YP_004046276.1 313207099 10002391 complement(1783297..1783884) 1 NC_014738.1 KEGG: fba:FIC_00688 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3109); hypothetical protein 1783884 10002391 Riean_1613 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046276.1 1783297 R 693978 CDS YP_004046277.1 313207100 10002392 complement(1783881..1784801) 1 NC_014738.1 KEGG: fba:FIC_00689 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1784801 10002392 Riean_1614 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046277.1 1783881 R 693978 CDS YP_004046278.1 313207101 10002393 1784845..1785078 1 NC_014738.1 KEGG: fba:FIC_00690 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1785078 10002393 Riean_1615 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046278.1 1784845 D 693978 CDS YP_004046279.1 313207102 10002394 1785250..1787235 1 NC_014738.1 COGs: COG3158 K+ transporter; InterPro IPR003855; KEGG: fba:FIC_00698 Kup system potassium uptake protein; PFAM: K potassium transporter; SPTR: KUP family potassium (K+) uptake permease; PFAM: K+ potassium transporter; potassium transporter 1787235 10002394 Riean_1616 Riemerella anatipestifer ATCC 11845 = DSM 15868 potassium transporter YP_004046279.1 1785250 D 693978 CDS YP_004046280.1 313207103 10002395 1787262..1787729 1 NC_014738.1 COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: fba:FIC_00699 ferric uptake regulation protein FUR; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulation protein; PFAM: Ferric uptake regulator family; ferric uptake regulator, fur family 1787729 10002395 Riean_1617 Riemerella anatipestifer ATCC 11845 = DSM 15868 ferric uptake regulator, fur family YP_004046280.1 1787262 D 693978 CDS YP_004046281.1 313207104 10002396 1787729..1789480 1 NC_014738.1 InterPro IPR005653; KEGG: fba:FIC_00700 hypothetical protein; PFAM: OstA family protein; SPTR: Putative uncharacterized protein; PFAM: OstA-like protein; osta family protein 1789480 10002396 Riean_1618 Riemerella anatipestifer ATCC 11845 = DSM 15868 osta family protein YP_004046281.1 1787729 D 693978 CDS YP_004046282.1 313207105 10002397 1789509..1790690 1 NC_014738.1 COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: fba:FIC_00701 aminotransferase class-III; PFAM: aminotransferase class-III; SPTR: Acetylornithine aminotransferase; PFAM: Aminotransferase class-III; aminotransferase class-iii 1790690 10002397 Riean_1619 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminotransferase class-iii YP_004046282.1 1789509 D 693978 CDS YP_004046283.1 313207106 10002398 1791001..1791564 1 NC_014738.1 KEGG: fba:FIC_00641 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1791564 10002398 Riean_1620 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046283.1 1791001 D 693978 CDS YP_004046284.1 313207107 10002399 1791670..1792404 1 NC_014738.1 KEGG: cho:Chro.30043 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1792404 10002399 Riean_1621 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046284.1 1791670 D 693978 CDS YP_004046285.1 313207108 10002400 complement(1792574..1793896) 1 NC_014738.1 COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: ilo:IL2398 phosphodiesterase-nucleotide pyrophosphatase-like protein; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; PRIAM: Phosphodiesterase I; SPTR: Phosphodiesterase I; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; phosphodiesterase i 1793896 10002400 Riean_1622 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphodiesterase i YP_004046285.1 1792574 R 693978 CDS YP_004046286.1 313207109 10002401 complement(1793941..1794732) 1 NC_014738.1 COGs: COG0171 NAD synthase; InterPro IPR003694; KEGG: fba:FIC_01788 NAD synthetase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase; nad+ synthetase 1794732 10002401 Riean_1623 Riemerella anatipestifer ATCC 11845 = DSM 15868 nad+ synthetase YP_004046286.1 1793941 R 693978 CDS YP_004046287.1 313207110 10002402 1794848..1795816 1 NC_014738.1 KEGG: fba:FIC_01789 GldB; SPTR: Putative uncharacterized protein; gliding motility protein gldb 1795816 10002402 Riean_1624 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein gldb YP_004046287.1 1794848 D 693978 CDS YP_004046288.1 313207111 10002403 1795847..1796173 1 NC_014738.1 InterPro IPR019854; KEGG: fba:FIC_01790 gliding motility protein GldC; SPTR: Gliding motility protein GldC; TIGRFAM: gliding motility-associated protein GldC; TIGRFAM: gliding motility-associated protein GldC; gliding motility protein GldC 1796173 10002403 Riean_1625 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein GldC YP_004046288.1 1795847 D 693978 CDS YP_004046289.1 313207112 10002404 1796194..1796742 1 NC_014738.1 COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070: IPR004388; KEGG: fba:FIC_01795 SUA5 YciO YrdC YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SPTR: Possible translation factor, Sua5; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; translation factor sua5 1796742 10002404 Riean_1626 Riemerella anatipestifer ATCC 11845 = DSM 15868 translation factor sua5 YP_004046289.1 1796194 D 693978 CDS YP_004046290.1 313207113 10002406 1797527..1798366 1 NC_014738.1 COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: coc:Coch_1821 serine O-acetyltransferase; PRIAM: Serine O-acetyltransferase; SPTR: Serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; serine o-acetyltransferase 1798366 10002406 Riean_1628 Riemerella anatipestifer ATCC 11845 = DSM 15868 serine o-acetyltransferase YP_004046290.1 1797527 D 693978 CDS YP_004046291.1 313207114 10002407 1798400..1799311 1 NC_014738.1 COGs: COG0031 Cysteine synthase; InterPro IPR010916: IPR001216: IPR001926: IPR005856: IPR 005859; KEGG: coc:Coch_1822 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase 1799311 10002407 Riean_1629 Riemerella anatipestifer ATCC 11845 = DSM 15868 cysteine synthase YP_004046291.1 1798400 D 693978 CDS YP_004046292.1 313207115 10002408 complement(1799462..1800283) 1 NC_014738.1 COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: fba:FIC_00441 hypothetical protein; PFAM: flavin reductase domain protein FMN-binding; SPTR: Putative uncharacterized protein; PFAM: Flavin reductase like domain; flavin reductase domain-containing protein fmn-binding protein 1800283 10002408 Riean_1630 Riemerella anatipestifer ATCC 11845 = DSM 15868 flavin reductase domain-containing protein fmn-binding protein YP_004046292.1 1799462 R 693978 CDS YP_004046293.1 313207116 10002409 complement(1800316..1800813) 1 NC_014738.1 InterPro IPR002625; KEGG: fba:FIC_00320 DNA mismatch repair protein; PFAM: Smr protein/MutS2; SPTR: Probable DNA mismatch repair protein; PFAM: Smr domain; smr protein/muts2 1800813 10002409 Riean_1631 Riemerella anatipestifer ATCC 11845 = DSM 15868 smr protein/muts2 YP_004046293.1 1800316 R 693978 CDS YP_004046294.1 313207117 10002410 complement(1800810..1801304) 1 NC_014738.1 COGs: COG0622 phosphoesterase; InterPro IPR004843: IPR000979; KEGG: fba:FIC_02076 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; TIGRFAM: phosphodiesterase, MJ0936 family; TIGRFAM: phosphoesterase, MJ0936 family; phosphodiesterase, mj0936 family 1801304 10002410 Riean_1632 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphodiesterase, mj0936 family YP_004046294.1 1800810 R 693978 CDS YP_004046295.1 313207118 10002411 1801391..1802131 1 NC_014738.1 COGs: COG0101 Pseudouridylate synthase; InterPro IPR020097: IPR001406; KEGG: fba:FIC_02075 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; tRNA pseudouridine synthase a 1802131 10002411 Riean_1633 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA pseudouridine synthase a YP_004046295.1 1801391 D 693978 CDS YP_004046296.1 313207119 10002412 1802153..1803904 1 NC_014738.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR017871: IPR001140: IPR003439: IPR017940: IPR 003593; KEGG: fba:FIC_02074 ABC-type transporter ATP-binding and permease co mponent; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC-type transporter ATP-binding and permease co mponent; PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter 1803904 10002412 Riean_1634 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004046296.1 1802153 D 693978 CDS YP_004046297.1 313207120 10002413 1803941..1804633 1 NC_014738.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR015218: IPR003593; KEGG: fba:FIC_00573 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Gliding motility-associated ABC transporter ATP-binding subunit; PFAM: ABC transporter; gliding motility protein glda 1804633 10002413 Riean_1635 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein glda YP_004046297.1 1803941 D 693978 CDS YP_004046298.1 313207121 10002414 complement(1804680..1805690) 1 NC_014738.1 COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterPro IPR004188: IPR002319: IPR006195: IPR004529; KEGG: fba:FIC_01565 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; SPTR: Phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1805690 10002414 Riean_1636 Riemerella anatipestifer ATCC 11845 = DSM 15868 phenylalanyl-tRNA synthetase subunit alpha YP_004046298.1 1804680 R 693978 CDS YP_004046299.1 313207122 10002415 complement(1805777..1806283) 1 NC_014738.1 KEGG: fba:FIC_00118 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1806283 10002415 Riean_1637 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046299.1 1805777 R 693978 CDS YP_004046300.1 313207123 10002416 complement(1806322..1807443) 1 NC_014738.1 COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197: IPR010723: IPR004559: IPR006638; KEGG: fba:FIC_00314 hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Possible coproporphyrinogen dehydrogenase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen iii oxidase 1807443 10002416 Riean_1638 Riemerella anatipestifer ATCC 11845 = DSM 15868 oxygen-independent coproporphyrinogen iii oxidase YP_004046300.1 1806322 R 693978 CDS YP_004046301.1 313207124 10002417 complement(1807464..1808411) 1 NC_014738.1 InterPro IPR019861; KEGG: fba:FIC_00313 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific membrane protein; membrane protein 1808411 10002417 Riean_1639 Riemerella anatipestifer ATCC 11845 = DSM 15868 membrane protein YP_004046301.1 1807464 R 693978 CDS YP_004046302.1 313207125 10002418 complement(1808430..1809278) 1 NC_014738.1 COGs: COG0414 Panthothenate synthetase; InterPro IPR003721; KEGG: fba:FIC_00484 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; pantothenate synthetase 1809278 10002418 Riean_1640 Riemerella anatipestifer ATCC 11845 = DSM 15868 pantothenate synthetase YP_004046302.1 1808430 R 693978 CDS YP_004046303.1 313207126 10002419 1809392..1810165 1 NC_014738.1 COGs: COG0297 Glycogen synthase; InterPro IPR013534; KEGG: fba:FIC_00485 glycogen synthase-like protein; PFAM: Starch synthase catalytic domain-containing protein; PRIAM: Starch synthase; SPTR: Glycogen synthase; PFAM: Starch synthase catalytic domain; starch synthase 1810165 10002419 Riean_1641 Riemerella anatipestifer ATCC 11845 = DSM 15868 starch synthase YP_004046303.1 1809392 D 693978 CDS YP_004046304.1 313207127 10002420 1810192..1811697 1 NC_014738.1 KEGG: fba:FIC_00486 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1811697 10002420 Riean_1642 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046304.1 1810192 D 693978 CDS YP_004046305.1 313207128 10002421 1811703..1813556 1 NC_014738.1 COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR000583: IPR001347: IPR017932: IPR005855; KEGG: fba:FIC_00487 glucosamine--fructose-6-phosphate aminotransferase (isomerizing); PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; SPTR: Glutamine--fructose-6-phosphate transaminase (Isomerizing); TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glutamine--fructose-6-phosphate transaminase 1813556 10002421 Riean_1643 Riemerella anatipestifer ATCC 11845 = DSM 15868 glutamine--fructose-6-phosphate transaminase YP_004046305.1 1811703 D 693978 CDS YP_004046306.1 313207129 10002422 1813727..1815139 1 NC_014738.1 COGs: COG1262 conserved hypothetical protein; InterPro IPR005532: IPR019866; KEGG: fba:FIC_00488 GldJ; PFAM: protein of unknown function DUF323; SPTR: GldJ; TIGRFAM: gliding motility-associated lipoprotein GldK; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldK; gliding motility protein gldk 1815139 10002422 Riean_1644 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein gldk YP_004046306.1 1813727 D 693978 CDS YP_004046307.1 313207130 10002423 1815172..1815858 1 NC_014738.1 InterPro IPR019852; KEGG: fba:FIC_00489 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility-associated protein GldL; TIGRFAM: gliding motility-associated protein GldL; gliding motility protein gldl 1815858 10002423 Riean_1645 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein gldl YP_004046307.1 1815172 D 693978 CDS YP_004046308.1 313207131 10002424 1815909..1817468 1 NC_014738.1 InterPro IPR019859; KEGG: fba:FIC_00490 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: gliding motility-associated protein GldM; PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM; gliding motility protein gldm 1817468 10002424 Riean_1646 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein gldm YP_004046308.1 1815909 D 693978 CDS YP_004046309.1 313207132 10002425 1817524..1818438 1 NC_014738.1 InterPro IPR019847; KEGG: fba:FIC_00491 GldN; SPTR: GldN; TIGRFAM: gliding motility associated protien GldN; TIGRFAM: gliding motility associated protien GldN; gliding motility protein gldn 1818438 10002425 Riean_1647 Riemerella anatipestifer ATCC 11845 = DSM 15868 gliding motility protein gldn YP_004046309.1 1817524 D 693978 CDS YP_004046310.1 313207133 10002426 1818525..1819571 1 NC_014738.1 COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: fba:FIC_00492 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Oxidoreductase; PFAM: FAD dependent oxidoreductase; fad dependent oxidoreductase 1819571 10002426 Riean_1648 Riemerella anatipestifer ATCC 11845 = DSM 15868 fad dependent oxidoreductase YP_004046310.1 1818525 D 693978 CDS YP_004046311.1 313207134 10002427 complement(1819645..1820862) 1 NC_014738.1 KEGG: fba:FIC_01785 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1820862 10002427 Riean_1649 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046311.1 1819645 R 693978 CDS YP_004046312.1 313207135 10002428 complement(1820900..1823512) 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fba:FIC_01784 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; tonb-dependent receptor 1823512 10002428 Riean_1650 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004046312.1 1820900 R 693978 CDS YP_004046313.1 313207136 10002429 1823716..1824393 1 NC_014738.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a wingeD-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: fba:FIC_01783 phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: DNA-binding response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 1824393 10002429 Riean_1651 Riemerella anatipestifer ATCC 11845 = DSM 15868 winged helix family two component transcriptional regulator YP_004046313.1 1823716 D 693978 CDS YP_004046314.1 313207137 10002430 1824401..1825423 1 NC_014738.1 COGs: COG5002 Signal transduction histidine kinase; InterPro IPR004358: IPR003661: IPR003594: IPR005467; KEGG: fba:FIC_01782 two-component system sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Two-component system sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 1825423 10002430 Riean_1652 Riemerella anatipestifer ATCC 11845 = DSM 15868 integral membrane sensor signal transduction histidine kinase YP_004046314.1 1824401 D 693978 CDS YP_004046315.1 313207138 10002431 1825506..1826165 1 NC_014738.1 COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: fba:FIC_01685 rhodanese-like domain protein; PFAM: YceI family protein; SPTR: Rhodanese-like domain protein; PFAM: YceI-like domain; ycei family protein 1826165 10002431 Riean_1653 Riemerella anatipestifer ATCC 11845 = DSM 15868 ycei family protein YP_004046315.1 1825506 D 693978 CDS YP_004046316.1 313207139 10002432 complement(1826219..1829578) 1 NC_014738.1 COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterPro IPR009849: IPR003711: IPR011545: IPR001650: IPR 005118: IPR014021: IPR004576: IPR014001; KEGG: fba:FIC_02346 transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; protein of unknown function DUF1410; helicase domain protein; TRCF domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Transcription-repair coupling factor helicase; TIGRFAM: transcription-repair coupling factor; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor 1829578 10002432 Riean_1654 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcription-repair coupling factor YP_004046316.1 1826219 R 693978 CDS YP_004046317.1 313207140 10002433 1829777..1830190 1 NC_014738.1 COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); InterPro IPR005227: IPR006641; KEGG: fba:FIC_01697 Holliday junction resolvase; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; SPTR: Putative Holliday junction resolvase; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; holliday junction resolvase yqgf 1830190 10002433 Riean_1655 Riemerella anatipestifer ATCC 11845 = DSM 15868 holliday junction resolvase yqgf YP_004046317.1 1829777 D 693978 CDS YP_004046318.1 313207141 10002434 1830187..1830759 1 NC_014738.1 COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: fba:FIC_01698 peptide deformylase; PFAM: formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase 1830759 10002434 Riean_1656 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptide deformylase YP_004046318.1 1830187 D 693978 CDS YP_004046319.1 313207142 10002435 1830787..1831209 1 NC_014738.1 KEGG: fba:FIC_01699 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1831209 10002435 Riean_1657 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046319.1 1830787 D 693978 CDS YP_004046320.1 313207143 10002436 1831749..1832522 1 NC_014738.1 COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR021115: IPR004518: IPR011551; KEGG: fba:FIC_01700 nucleoside triphosphate pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; mazg family protein 1832522 10002436 Riean_1658 Riemerella anatipestifer ATCC 11845 = DSM 15868 mazg family protein YP_004046320.1 1831749 D 693978 CDS YP_004046321.1 313207144 10002437 1832553..1833299 1 NC_014738.1 COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR013708: IPR006151; KEGG: fba:FIC_01652 shikimate 5-dehydrogenase I alpha; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; SPTR: Possible shikimate dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase; shikimate dehydrogenase substrate binding domain-containing protein 1833299 10002437 Riean_1659 Riemerella anatipestifer ATCC 11845 = DSM 15868 shikimate dehydrogenase substrate binding domain-containing protein YP_004046321.1 1832553 D 693978 CDS YP_004046322.1 313207145 10002438 1833379..1835193 1 NC_014738.1 InterPro IPR007139; KEGG: fba:FIC_01653 hypothetical protein; PFAM: protein of unknown function DUF349; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF349); hypothetical protein 1835193 10002438 Riean_1660 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046322.1 1833379 D 693978 CDS YP_004046323.1 313207146 10002439 1835288..1836307 1 NC_014738.1 COGs: COG0117 Pyrimidine deaminase; InterPro IPR016192: IPR002125: IPR002734: IPR004794; KEGG: fba:FIC_01655 diaminohydroxyphosphoribosylaminopyrimidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; SPTR: Diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein ribd 1836307 10002439 Riean_1661 Riemerella anatipestifer ATCC 11845 = DSM 15868 riboflavin biosynthesis protein ribd YP_004046323.1 1835288 D 693978 CDS YP_004046324.1 313207147 10002440 1836313..1837950 1 NC_014738.1 KEGG: fba:FIC_00288 cytoplasmic membrane protein; SPTR: Cytoplasmic membrane protein; cytoplasmic membrane protein 1837950 10002440 Riean_1662 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytoplasmic membrane protein YP_004046324.1 1836313 D 693978 CDS YP_004046325.1 313207148 10002441 complement(1837976..1839520) 1 NC_014738.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR013973; KEGG: fba:FIC_01918 response regulator; PFAM: response regulator receiver; PglZ domain protein; SMART: response regulator receiver; SPTR: Two-component response transcriptional regulator; PFAM: PglZ domain; Response regulator receiver domain; response regulator receiver protein 1839520 10002441 Riean_1663 Riemerella anatipestifer ATCC 11845 = DSM 15868 response regulator receiver protein YP_004046325.1 1837976 R 693978 CDS YP_004046326.1 313207149 10002442 complement(1839670..1840545) 1 NC_014738.1 COGs: COG1741 Pirin-related protein; InterPro IPR003829: IPR008778: IPR012093; KEGG: gfo:GFO_1139 pirin family protein; PFAM: Pirin domain protein; SPTR: Pirin family protein; PFAM: Pirin C-terminal cupin domain; Pirin; pirin domain-containing protein 1840545 10002442 Riean_1664 Riemerella anatipestifer ATCC 11845 = DSM 15868 pirin domain-containing protein YP_004046326.1 1839670 R 693978 CDS YP_004046327.1 313207150 10002443 1840694..1841194 1 NC_014738.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: cat:CA2559_08291 RNA polymerase ECF-type sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma-24 subunit, ecf subfamily 1841194 10002443 Riean_1665 Riemerella anatipestifer ATCC 11845 = DSM 15868 RNA polymerase, sigma-24 subunit, ecf subfamily YP_004046327.1 1840694 D 693978 CDS YP_004046328.1 313207151 10002444 1841209..1841994 1 NC_014738.1 KEGG: tet:TTHERM_00647160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1841994 10002444 Riean_1666 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046328.1 1841209 D 693978 CDS YP_004046329.1 313207152 10002445 complement(1841989..1842675) 1 NC_014738.1 COGs: COG0775 Nucleoside phosphorylase; InterPro IPR000845: IPR010049; KEGG: coc:Coch_2188 adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1; PRIAM: Adenosylhomocysteine nucleosidase; SPTR: MTA/SAH nucleosidase; TIGRFAM: MTA/SAH nucleosidase; PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; methylthioadenosine nucleosidase 1842675 10002445 Riean_1667 Riemerella anatipestifer ATCC 11845 = DSM 15868 methylthioadenosine nucleosidase YP_004046329.1 1841989 R 693978 CDS YP_004046330.1 313207153 10002446 complement(1842738..1843226) 1 NC_014738.1 COGs: COG4574 Serine protease inhibitor ecotin; InterPro IPR005658; KEGG: kva:Kvar_1425 proteinase inhibitor I11 ecotin; PFAM: proteinase inhibitor I11 ecotin; SPTR: Proteinase inhibitor I11 ecotin; PFAM: Ecotin; proteinase inhibitor i11 ecotin 1843226 10002446 Riean_1668 Riemerella anatipestifer ATCC 11845 = DSM 15868 proteinase inhibitor i11 ecotin YP_004046330.1 1842738 R 693978 CDS YP_004046331.1 313207154 10002447 complement(1843342..1844109) 1 NC_014738.1 KEGG: fba:FIC_02112 nitrous oxide reductase maturation transmembrane protein NosY; SPTR: Nitrous oxide reductase maturation transmembrane protein NosY; nitrous oxide reductase maturation transmembrane protein nosy 1844109 10002447 Riean_1669 Riemerella anatipestifer ATCC 11845 = DSM 15868 nitrous oxide reductase maturation transmembrane protein nosy YP_004046331.1 1843342 R 693978 CDS YP_004046332.1 313207155 10002448 complement(1844102..1844815) 1 NC_014738.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: fba:FIC_02111 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC transporter; PFAM: ABC transporter; ABC transporter 1844815 10002448 Riean_1670 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004046332.1 1844102 R 693978 CDS YP_004046333.1 313207156 10002449 complement(1844831..1846075) 1 NC_014738.1 COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR006626; KEGG: fba:FIC_02110 nitrous oxide reductase maturation protein NosD; SPTR: Nitrous oxide reductase maturation protein NosD; PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies); nitrous oxide reductase maturation protein nosd 1846075 10002449 Riean_1671 Riemerella anatipestifer ATCC 11845 = DSM 15868 nitrous oxide reductase maturation protein nosd YP_004046333.1 1844831 R 693978 CDS YP_004046334.1 313207157 10002450 complement(1846114..1846527) 1 NC_014738.1 KEGG: fba:FIC_02109 lipoprotein, putative; SPTR: Lipoprotein, putative; PFAM: NosL; lipoprotein 1846527 10002450 Riean_1672 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipoprotein YP_004046334.1 1846114 R 693978 CDS YP_004046335.1 313207158 10002451 complement(1846533..1847114) 1 NC_014738.1 KEGG: fba:FIC_02108 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1847114 10002451 Riean_1673 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046335.1 1846533 R 693978 CDS YP_004046336.1 313207159 10002452 complement(1847182..1849188) 1 NC_014738.1 COGs: COG4263 Nitrous oxide reductase; InterPro IPR001505: IPR002429; KEGG: fba:FIC_02107 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II; PRIAM: Nitrous-oxide reductase; SPTR: Nitrous-oxide reductase; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; nitrous oxide reductase apoprotein 1849188 10002452 Riean_1674 Riemerella anatipestifer ATCC 11845 = DSM 15868 nitrous oxide reductase apoprotein YP_004046336.1 1847182 R 693978 CDS YP_004046337.1 313207160 10002453 complement(1849201..1849695) 1 NC_014738.1 InterPro IPR009056; KEGG: fba:FIC_02106 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome c; hypothetical protein 1849695 10002453 Riean_1675 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046337.1 1849201 R 693978 CDS YP_004046338.1 313207161 10002454 1849829..1850227 1 NC_014738.1 COGs: COG4654 Cytochrome c551/c552; InterPro IPR002324: IPR003088: IPR009056; KEGG: fba:FIC_02105 cytochrome c551/c552; PFAM: cytochrome c class I; SPTR: Cytochrome c551/c552; PFAM: Cytochrome c; cytochrome c class i 1850227 10002454 Riean_1676 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytochrome c class i YP_004046338.1 1849829 D 693978 CDS YP_004046339.1 313207162 10002455 1850232..1850597 1 NC_014738.1 KEGG: fba:FIC_00089 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1850597 10002455 Riean_1677 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046339.1 1850232 D 693978 CDS YP_004046340.1 313207163 10002457 complement(1851884..1852423) 1 NC_014738.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fba:FIC_02115 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; SPTR: Transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; transcriptional regulator, crp/fnr family 1852423 10002457 Riean_1679 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, crp/fnr family YP_004046340.1 1851884 R 693978 CDS YP_004046341.1 313207164 10002458 complement(1852563..1853282) 1 NC_014738.1 COGs: COG2846 Regulator of cell morphogenesis and NO signaling; InterPro IPR007500: IPR012312: IPR019903; KEGG: fba:FIC_00503 nitric oxide-dependent regulator DnrN or NorA; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; SPTR: Cell division and morphogenesis protein ScdA; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: Hemerythrin HHE cation binding domain; Domain of Unknown function (DUF542); TIGRFAM: iron-sulfur cluster repair di-iron protein; iron-sulfur cluster repair di-iron protein 1853282 10002458 Riean_1680 Riemerella anatipestifer ATCC 11845 = DSM 15868 iron-sulfur cluster repair di-iron protein YP_004046341.1 1852563 R 693978 CDS YP_004046342.1 313207165 10002459 complement(1853377..1853814) 1 NC_014738.1 COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: fjo:Fjoh_2411 BadM/Rrf2 family transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: Transcriptional regulator, BadM/Rrf2 family protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (transcriptional regulator); transcriptional regulator, badm/rrf2 family 1853814 10002459 Riean_1681 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, badm/rrf2 family YP_004046342.1 1853377 R 693978 CDS YP_004046343.1 313207166 10002460 1854033..1854647 1 NC_014738.1 COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: fba:FIC_01656 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: Putative uncharacterized protein; manually curated; PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family; hypothetical protein 1854647 10002460 Riean_1682 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046343.1 1854033 D 693978 CDS YP_004046344.1 313207167 10002461 complement(1854649..1855626) 1 NC_014738.1 COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: fjo:Fjoh_4070 ApbE family lipoprotein; PFAM: ApbE family lipoprotein; SPTR: ApbE family lipoprotein; PFAM: ApbE family; apbe family lipoprotein 1855626 10002461 Riean_1683 Riemerella anatipestifer ATCC 11845 = DSM 15868 apbe family lipoprotein YP_004046344.1 1854649 R 693978 CDS YP_004046345.1 313207168 10002462 complement(1855616..1857799) 1 NC_014738.1 COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR008254: IPR008333: IPR001433; KEGG: fjo:Fjoh_4069 flavodoxin/nitric oxide synthase; PFAM: flavodoxin/nitric oxide synthase; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; SPTR: Flavodoxin/nitric oxide synthase; PFAM: Flavodoxin; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; flavodoxin/nitric oxide synthase 1857799 10002462 Riean_1684 Riemerella anatipestifer ATCC 11845 = DSM 15868 flavodoxin/nitric oxide synthase YP_004046345.1 1855616 R 693978 CDS YP_004046346.1 313207169 10002463 complement(1857805..1858284) 1 NC_014738.1 KEGG: dfe:Dfer_1666 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Predicted periplasmic protein (DUF2271); hypothetical protein 1858284 10002463 Riean_1685 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046346.1 1857805 R 693978 CDS YP_004046347.1 313207170 10002464 complement(1858293..1859783) 1 NC_014738.1 InterPro IPR002110: IPR020683; KEGG: fjo:Fjoh_4067 ankyrin; PFAM: Ankyrin; SMART: Ankyrin; SPTR: Ankyrin; PFAM: Ankyrin repeat; ankyrin 1859783 10002464 Riean_1686 Riemerella anatipestifer ATCC 11845 = DSM 15868 ankyrin YP_004046347.1 1858293 R 693978 CDS YP_004046348.1 313207171 10002465 complement(1859875..1861218) 1 NC_014738.1 KEGG: fjo:Fjoh_4072 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 1861218 10002465 Riean_1687 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046348.1 1859875 R 693978 CDS YP_004046349.1 313207172 10002466 complement(1861228..1863582) 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: fjo:Fjoh_4071 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; tonb-dependent receptor 1863582 10002466 Riean_1688 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004046349.1 1861228 R 693978 CDS YP_004046350.1 313207173 10002467 1863652..1864293 1 NC_014738.1 KEGG: fba:FIC_01473 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1864293 10002467 Riean_1689 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046350.1 1863652 D 693978 CDS YP_004046351.1 313207174 10002468 1864341..1865762 1 NC_014738.1 COGs: COG1760 L-serine deaminase; InterPro IPR005131: IPR005130: IPR004644; KEGG: fba:FIC_01471 L-serine dehydratase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; PRIAM: L-serine ammonia-lyase; SPTR: L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; L-serine dehydratase, iron-sulfur-dependent, beta subunit; l-serine dehydratase 1 1865762 10002468 Riean_1690 Riemerella anatipestifer ATCC 11845 = DSM 15868 l-serine dehydratase 1 YP_004046351.1 1864341 D 693978 CDS YP_004046352.1 313207175 10002469 1865927..1866256 1 NC_014738.1 COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: fba:FIC_01762 transcriptional regulator, PadR family; PFAM: transcriptional regulator PadR family protein; SPTR: Transcriptional regulator, PadR family; PFAM: Transcriptional regulator PadR-like family; transcriptional regulator, padr family 1866256 10002469 Riean_1691 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, padr family YP_004046352.1 1865927 D 693978 CDS YP_004046353.1 313207176 10002470 1866275..1867954 1 NC_014738.1 COGs: COG1983 Putative stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: fba:FIC_01761 hypothetical protein; PFAM: PspC domain protein; SPTR: Putative uncharacterized protein; PFAM: PspC domain; phage shock protein c, pspc 1867954 10002470 Riean_1692 Riemerella anatipestifer ATCC 11845 = DSM 15868 phage shock protein c, pspc YP_004046353.1 1866275 D 693978 CDS YP_004046354.1 313207177 10002471 1868166..1868738 1 NC_014738.1 COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fba:FIC_01760 acyltransferase family protein; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Acyltransferase family protein; PFAM: Acyltransferase; phospholipid/glycerol acyltransferase 1868738 10002471 Riean_1693 Riemerella anatipestifer ATCC 11845 = DSM 15868 phospholipid/glycerol acyltransferase YP_004046354.1 1868166 D 693978 CDS YP_004046355.1 313207178 10002472 1868753..1869175 1 NC_014738.1 COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR006683: IPR003736; KEGG: fba:FIC_01759 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: Putative uncharacterized protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; thioesterase superfamily protein 1869175 10002472 Riean_1694 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioesterase superfamily protein YP_004046355.1 1868753 D 693978 CDS YP_004046356.1 313207179 10002473 1869176..1870168 1 NC_014738.1 COGs: COG1169 Isochorismate synthase; InterPro IPR015890; KEGG: fba:FIC_01758 isochorismate synthase; PFAM: Chorismate binding-like; SPTR: Isochorismate synthase; PFAM: chorismate binding enzyme; chorismate binding protein 1870168 10002473 Riean_1695 Riemerella anatipestifer ATCC 11845 = DSM 15868 chorismate binding protein YP_004046356.1 1869176 D 693978 CDS YP_004046357.1 313207180 10002474 1870181..1870810 1 NC_014738.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR001808; KEGG: sli:Slin_6174 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SPTR: Transcriptional regulator, Crp/Fnr family; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; transcriptional regulator, crp/fnr family 1870810 10002474 Riean_1696 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, crp/fnr family YP_004046357.1 1870181 D 693978 CDS YP_004046358.1 313207181 10002475 1870893..1871621 1 NC_014738.1 COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: fba:FIC_01825 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; PFAM: ABC transporter; BrancheD-chain amino acid ATP-binding cassette transporter; ABC transporter 1871621 10002475 Riean_1697 Riemerella anatipestifer ATCC 11845 = DSM 15868 ABC transporter YP_004046358.1 1870893 D 693978 CDS YP_004046359.1 313207182 10002476 1871638..1872210 1 NC_014738.1 COGs: COG2096 conserved hypothetical protein; InterPro IPR002779: IPR017858; KEGG: fba:FIC_02267 Cob(I)alamin adenosyltransferase PduO; PFAM: cobalamin adenosyltransferase; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: Cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; ATP/cobalamin adenosyltransferase 1872210 10002476 Riean_1698 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP/cobalamin adenosyltransferase YP_004046359.1 1871638 D 693978 CDS YP_004046360.1 313207183 10002477 1872197..1872847 1 NC_014738.1 COGs: COG1564 Thiamine pyrophosphokinase; InterPro IPR007371: IPR006282; KEGG: fba:FIC_02266 thiamin pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein; SPTR: Thiamine diphosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase; thiamine pyrophosphokinase 1872847 10002477 Riean_1699 Riemerella anatipestifer ATCC 11845 = DSM 15868 thiamine pyrophosphokinase YP_004046360.1 1872197 D 693978 CDS YP_004046361.1 313207184 10002478 1872961..1874352 1 NC_014738.1 COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183; KEGG: fba:FIC_02265 arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Putative arginine decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; orn/dap/arg decarboxylase 2 1874352 10002478 Riean_1700 Riemerella anatipestifer ATCC 11845 = DSM 15868 orn/dap/arg decarboxylase 2 YP_004046361.1 1872961 D 693978 CDS YP_004046362.1 313207185 10002479 1874379..1875236 1 NC_014738.1 COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR020855: IPR006035: IPR005925; KEGG: fba:FIC_02262 agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: Agmatinase; TIGRFAM: agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; agmatinase 1875236 10002479 Riean_1701 Riemerella anatipestifer ATCC 11845 = DSM 15868 agmatinase YP_004046362.1 1874379 D 693978 CDS YP_004046363.1 313207186 10002480 1875335..1875703 1 NC_014738.1 COGs: COG3759 membrane protein; InterPro IPR009732; KEGG: fba:FIC_02136 hypothetical protein; PFAM: protein of unknown function DUF1304; SPTR: Integral membrane protein; PFAM: Protein of unknown function (DUF1304); hypothetical protein 1875703 10002480 Riean_1702 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046363.1 1875335 D 693978 CDS YP_004046364.1 313207187 10002481 1875709..1876062 1 NC_014738.1 COGs: COG2315 conserved hypothetical protein; KEGG: fba:FIC_01291 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF419); hypothetical protein 1876062 10002481 Riean_1703 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046364.1 1875709 D 693978 CDS YP_004046365.1 313207188 10002482 complement(1876066..1876986) 1 NC_014738.1 COGs: COG0196 FAD synthase; InterPro IPR015864: IPR015865: IPR002606; KEGG: fba:FIC_01292 FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase; SPTR: Possible FAD synthetase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; riboflavin biosynthesis protein ribf 1876986 10002482 Riean_1704 Riemerella anatipestifer ATCC 11845 = DSM 15868 riboflavin biosynthesis protein ribf YP_004046365.1 1876066 R 693978 CDS YP_004046366.1 313207189 10002483 1877127..1878635 1 NC_014738.1 COGs: COG0055 F0F1-type ATP synthase beta subunit; InterPro IPR020003: IPR004100: IPR000194: IPR000793: IPR 005722: IPR003593; KEGG: fba:FIC_01293 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; SPTR: H(+)-transporting two-sector ATPase; TIGRFAM: ATP synthase F1, beta subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase f1 subunit beta 1878635 10002483 Riean_1705 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP synthase f1 subunit beta YP_004046366.1 1877127 D 693978 CDS YP_004046367.1 313207190 10002484 1878709..1878990 1 NC_014738.1 InterPro IPR020546; KEGG: fba:FIC_01294 ATP synthase epsilon chain; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; SPTR: ATP synthase subunit epsilon; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATPase F1 subunit delta/epsilon 1878990 10002484 Riean_1706 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATPase F1 subunit delta/epsilon YP_004046367.1 1878709 D 693978 CDS YP_004046368.1 313207191 10002485 complement(1879079..1879498) 1 NC_014738.1 COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: fba:FIC_01359 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; SPTR: Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase; nucleoside-diphosphate kinase 1879498 10002485 Riean_1707 Riemerella anatipestifer ATCC 11845 = DSM 15868 nucleoside-diphosphate kinase YP_004046368.1 1879079 R 693978 CDS YP_004046369.1 313207192 10002486 complement(1879773..1880846) 1 NC_014738.1 COGs: COG0115 BrancheD-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR018300: IPR001544: IPR005786; KEGG: fba:FIC_01351 brancheD-chain amino acid aminotransferase; PFAM: aminotransferase class IV; PRIAM: BrancheD-chain-amino-acid transaminase; SPTR: BrancheD-chain-amino-acid aminotransferase; TIGRFAM: brancheD-chain amino acid aminotransferase; PFAM: Aminotransferase class IV; TIGRFAM: brancheD-chain amino acid aminotransferase, group II; brancheD-chain amino acid aminotransferase 1880846 10002486 Riean_1708 Riemerella anatipestifer ATCC 11845 = DSM 15868 brancheD-chain amino acid aminotransferase YP_004046369.1 1879773 R 693978 CDS YP_004046370.1 313207193 10002487 1880931..1881605 1 NC_014738.1 COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: fba:FIC_01352 peptidase; PFAM: protein of unknown function DUF752; SPTR: tRNA (5-aminomethyl-2-thiouridylate) methyltransferase; PFAM: Protein of unknown function (DUF752); hypothetical protein 1881605 10002487 Riean_1709 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046370.1 1880931 D 693978 CDS YP_004046371.1 313207194 10002489 complement(1881781..1882422) 1 NC_014738.1 COGs: COG0692 Uracil DNA glycosylase; InterPro IPR018085: IPR005122: IPR002043; KEGG: fba:FIC_01867 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; uracil-DNA glycosylase 1882422 10002489 Riean_1710 Riemerella anatipestifer ATCC 11845 = DSM 15868 uracil-DNA glycosylase YP_004046371.1 1881781 R 693978 CDS YP_004046372.1 313207195 10002490 complement(1882433..1882918) 1 NC_014738.1 COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fnu:FN1519 23S rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: rRNA methylase; PFAM: SpoU rRNA Methylase family; tRNA/rRNA methyltransferase (spou) 1882918 10002490 Riean_1711 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA/rRNA methyltransferase (spou) YP_004046372.1 1882433 R 693978 CDS YP_004046373.1 313207196 10002491 complement(1882934..1884292) 1 NC_014738.1 COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713: IPR013221; KEGG: fjo:Fjoh_0414 cytoplasmic peptidoglycan synthetase domain-containing protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR:UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl -meso-diaminopimelateligase; PFAM: Mur ligase family, catalytic domain; Mur ligase middle domain; cytoplasmic peptidoglycan synthetase domain-containing protein 1884292 10002491 Riean_1712 Riemerella anatipestifer ATCC 11845 = DSM 15868 cytoplasmic peptidoglycan synthetase domain-containing protein YP_004046373.1 1882934 R 693978 CDS YP_004046374.1 313207197 10002492 complement(1884397..1884927) 1 NC_014738.1 KEGG: fba:FIC_02088 lipoprotein; SPTR: Probable lipoprotein; lipoprotein 1884927 10002492 Riean_1713 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipoprotein YP_004046374.1 1884397 R 693978 CDS YP_004046375.1 313207198 10002493 complement(1884932..1885117) 1 NC_014738.1 KEGG: fba:FIC_02087 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1885117 10002493 Riean_1714 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046375.1 1884932 R 693978 CDS YP_004046376.1 313207199 10002494 1885158..1885484 1 NC_014738.1 KEGG: fba:FIC_02086 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1885484 10002494 Riean_1715 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046376.1 1885158 D 693978 CDS YP_004046377.1 313207200 10002495 1885460..1886398 1 NC_014738.1 COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; KEGG: fba:FIC_02085 1-aminocyclopropane-1-carboxylate deaminase; SPTR: 1-aminocyclopropane-1-carboxylate deaminase; 1-aminocyclopropane-1-carboxylate deaminase 1886398 10002495 Riean_1716 Riemerella anatipestifer ATCC 11845 = DSM 15868 1-aminocyclopropane-1-carboxylate deaminase YP_004046377.1 1885460 D 693978 CDS YP_004046378.1 313207201 10002496 1886509..1887567 1 NC_014738.1 COGs: COG1705 Muramidase (flagellum-specific); InterPro IPR002901: IPR018392: IPR013338: IPR002482; KEGG: fba:FIC_02084 hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Peptidoglycan-binding lysin domain; SMART: Lysozyme subfamily 2; Peptidoglycan-binding LysM; SPTR: Hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; LysM domain; mannosyl-glycoprotein endo-beta-n-acetylglucosamidase 1887567 10002496 Riean_1717 Riemerella anatipestifer ATCC 11845 = DSM 15868 mannosyl-glycoprotein endo-beta-n-acetylglucosamidase YP_004046378.1 1886509 D 693978 CDS YP_004046379.1 313207202 10002497 1887598..1888878 1 NC_014738.1 COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814: IPR004639; KEGG: fba:FIC_02083 glutamate-1-semialdehyde aminotransferase; PFAM: aminotransferase class-III; SPTR: Glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde-2,1-aminomutase 1888878 10002497 Riean_1718 Riemerella anatipestifer ATCC 11845 = DSM 15868 glutamate-1-semialdehyde-2,1-aminomutase YP_004046379.1 1887598 D 693978 CDS YP_004046380.1 313207203 10002498 1888989..1891121 1 NC_014738.1 COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002471: IPR002469; KEGG: fba:FIC_01450 dipeptidyl peptidase IV; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Possible dipeptidyl-peptidase IV; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; peptidase s9b dipeptidylpeptidase iv domain-containing protein 1891121 10002498 Riean_1719 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase s9b dipeptidylpeptidase iv domain-containing protein YP_004046380.1 1888989 D 693978 CDS YP_004046381.1 313207204 10002500 complement(1891370..1892155) 1 NC_014738.1 COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: fba:FIC_01484 metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein; SPTR: Possible phosphonate metabolism protein PhnP; PFAM: Metallo-beta-lactamase superfamily; metal-dependent hydrolase 1892155 10002500 Riean_1720 Riemerella anatipestifer ATCC 11845 = DSM 15868 metal-dependent hydrolase YP_004046381.1 1891370 R 693978 CDS YP_004046382.1 313207205 10002501 1892192..1893625 1 NC_014738.1 KEGG: fba:FIC_01485 nicotinamide mononucleotide adenylyltransferase; SPTR: Putative uncharacterized protein; nicotinamide mononucleotide adenylyltransferase 1893625 10002501 Riean_1721 Riemerella anatipestifer ATCC 11845 = DSM 15868 nicotinamide mononucleotide adenylyltransferase YP_004046382.1 1892192 D 693978 CDS YP_004046383.1 313207206 10002502 1893638..1894087 1 NC_014738.1 COGs: COG1956 GAF domain-containing protein; InterPro IPR003018; KEGG: fba:FIC_01486 GAF domain-containing protein; PFAM: GAF domain protein; SPTR: Possible GAF domain protein; PFAM: GAF domain; gaf sensor protein 1894087 10002502 Riean_1722 Riemerella anatipestifer ATCC 11845 = DSM 15868 gaf sensor protein YP_004046383.1 1893638 D 693978 CDS YP_004046384.1 313207207 10002503 complement(1894231..1894806) 1 NC_014738.1 KEGG: fba:FIC_00470 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1894806 10002503 Riean_1723 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046384.1 1894231 R 693978 CDS YP_004046385.1 313207208 10002504 1894965..1896350 1 NC_014738.1 COGs: COG1690 conserved hypothetical protein; KEGG: sil:SPO0160 hypothetical protein; SPTR: RtcB family protein; PFAM: Uncharacterized protein family UPF0027; hypothetical protein 1896350 10002504 Riean_1724 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046385.1 1894965 D 693978 CDS YP_004046386.1 313207209 10002505 1896371..1896529 1 NC_014738.1 SPTR: Putative uncharacterized protein; hypothetical protein 1896529 10002505 Riean_1725 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046386.1 1896371 D 693978 CDS YP_004046387.1 313207210 10002506 1896601..1896939 1 NC_014738.1 InterPro IPR014905; KEGG: shi:Shel_01800 HIRAN domain-containing protein; PFAM: HIRAN; SPTR: HIRAN domain-containing protein; PFAM: HIRAN domain; hiran domain-containing protein 1896939 10002506 Riean_1726 Riemerella anatipestifer ATCC 11845 = DSM 15868 hiran domain-containing protein YP_004046387.1 1896601 D 693978 CDS YP_004046388.1 313207211 10002507 1897390..1900659 1 NC_014738.1 COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR006935: IPR001650: IPR014021: IPR014001; KEGG: bam:Bamb_3974 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; SPTR: Helicase; PFAM: Type III restriction enzyme, res subunit; type iii restriction protein res subunit 1900659 10002507 Riean_1727 Riemerella anatipestifer ATCC 11845 = DSM 15868 type iii restriction protein res subunit YP_004046388.1 1897390 D 693978 CDS YP_004046389.1 313207212 10002508 1900707..1901372 1 NC_014738.1 KEGG: pgi:PG1449 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1901372 10002508 Riean_1728 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046389.1 1900707 D 693978 CDS YP_004046390.1 313207213 10002509 1901610..1903157 1 NC_014738.1 COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002052: IPR002296: IPR003356; KEGG: nhl:Nhal_3964 N-6 DNA methylase; PFAM: N-6 DNA methylase; SPTR: N-6 DNA methylase; PFAM: N-6 DNA Methylase; HsdM N-terminal domain; n-6 DNA methylase 1903157 10002509 Riean_1729 Riemerella anatipestifer ATCC 11845 = DSM 15868 n-6 DNA methylase YP_004046390.1 1901610 D 693978 CDS YP_004046391.1 313207214 10002510 1903162..1904259 1 NC_014738.1 COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: tau:Tola_1157 restriction modification system DNA specificity domain protein; PFAM: restriction modification system DNA specificity domain; SPTR: Restriction endonuclease S subunits; PFAM: Type I restriction modification DNA specificity domain; restriction modification system DNA specificity domain 1904259 10002510 Riean_1730 Riemerella anatipestifer ATCC 11845 = DSM 15868 restriction modification system DNA specificity domain YP_004046391.1 1903162 D 693978 CDS YP_004046392.1 313207215 10002511 1904394..1907837 1 NC_014738.1 COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR007409: IPR006935: IPR014021: IPR001650: IPR 014001; KEGG: nhl:Nhal_3962 type III restriction protein res subunit; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase; SPTR: Type III restriction protein res subunit; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Domain of unknown function (DUF3559); Type III restriction enzyme, res subunit; type i site-specific deoxyribonuclease 1907837 10002511 Riean_1731 Riemerella anatipestifer ATCC 11845 = DSM 15868 type i site-specific deoxyribonuclease YP_004046392.1 1904394 D 693978 CDS YP_004046393.1 313207216 10002512 complement(1907903..1908763) 1 NC_014738.1 COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: fjo:Fjoh_1565 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; manually curated; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase 1908763 10002512 Riean_1732 Riemerella anatipestifer ATCC 11845 = DSM 15868 endonuclease/exonuclease/phosphatase YP_004046393.1 1907903 R 693978 CDS YP_004046394.1 313207217 10002513 complement(1908744..1910561) 1 NC_014738.1 COGs: COG1785 Alkaline phosphatase; InterPro IPR001952; KEGG: dfe:Dfer_1383 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; SPTR: Alkaline phosphatase; PFAM: Alkaline phosphatase; alkaline phosphatase 1910561 10002513 Riean_1733 Riemerella anatipestifer ATCC 11845 = DSM 15868 alkaline phosphatase YP_004046394.1 1908744 R 693978 CDS YP_004046395.1 313207218 10002514 complement(1910561..1912072) 1 NC_014738.1 InterPro IPR012944; KEGG: cpi:Cpin_0005 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain-containing protein; PFAM: SusD family; ragb/susd domain-containing protein 1912072 10002514 Riean_1734 Riemerella anatipestifer ATCC 11845 = DSM 15868 ragb/susd domain-containing protein YP_004046395.1 1910561 R 693978 CDS YP_004046396.1 313207219 10002515 complement(1912093..1914963) 1 NC_014738.1 InterPro IPR012910: IPR000531; KEGG: cpi:Cpin_0004 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Probable outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor plug 1914963 10002515 Riean_1735 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004046396.1 1912093 R 693978 CDS YP_004046397.1 313207220 10002516 complement(1915082..1916491) 1 NC_014738.1 InterPro IPR004843: IPR011658; KEGG: pdi:BDI_3030 Icc family phosphohydrolase; PFAM: metallophosphoesterase; SMART: PA14 domain protein; SPTR: Icc family phosphohydrolase; PFAM: Calcineurin-like phosphoesterase; PA14 domain; metallophosphoesterase 1916491 10002516 Riean_1736 Riemerella anatipestifer ATCC 11845 = DSM 15868 metallophosphoesterase YP_004046397.1 1915082 R 693978 CDS YP_004046398.1 313207221 10002517 complement(1916564..1918237) 1 NC_014738.1 COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR018456: IPR000109: IPR005279; KEGG: fba:FIC_01451 proton-dependent peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; SPTR: Putative proton-dependent peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial; amino acid/peptide transporter 1918237 10002517 Riean_1737 Riemerella anatipestifer ATCC 11845 = DSM 15868 amino acid/peptide transporter YP_004046398.1 1916564 R 693978 CDS YP_004046399.1 313207222 10002518 complement(1918348..1918908) 1 NC_014738.1 KEGG: fba:FIC_01475 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1918908 10002518 Riean_1738 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046399.1 1918348 R 693978 CDS YP_004046400.1 313207223 10002519 1919251..1919997 1 NC_014738.1 COGs: COG0274 Deoxyribose-phosphate aldolase; InterPro IPR002915: IPR011343; KEGG: fjo:Fjoh_1656 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Deoxyribose-phosphate aldolase; SPTR: Possible deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase 1919997 10002519 Riean_1739 Riemerella anatipestifer ATCC 11845 = DSM 15868 deoxyribose-phosphate aldolase YP_004046400.1 1919251 D 693978 CDS YP_004046401.1 313207224 10002520 complement(1920129..1921727) 1 NC_014738.1 COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR003016: IPR000089: IPR004167: IPR001078; KEGG: fba:FIC_01401 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: Dihydrolipoyllysine-residue acetyltransferase; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; hypothetical protein 1921727 10002520 Riean_1740 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046401.1 1920129 R 693978 CDS YP_004046402.1 313207225 10002521 complement(1921802..1922803) 1 NC_014738.1 COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017: IPR017597; KEGG: fba:FIC_01402 pyruvate dehydrogenase E1 component alpha subunit; PFAM: dehydrogenase E1 component; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: Pyruvate dehydrogenase (Acetyl-transferring); TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit; pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha 1922803 10002521 Riean_1741 Riemerella anatipestifer ATCC 11845 = DSM 15868 pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha YP_004046402.1 1921802 R 693978 CDS YP_004046403.1 313207226 10002522 complement(1922943..1923584) 1 NC_014738.1 KEGG: ngr:NAEGRDRAFT_80252 ABC transporter AAA ATPase; SPTR: Abc transporter AAA ATPase; hypothetical protein 1923584 10002522 Riean_1742 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046403.1 1922943 R 693978 CDS YP_004046404.1 313207227 10002523 complement(1923620..1924243) 1 NC_014738.1 KEGG: pyo:PY02966 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1924243 10002523 Riean_1743 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046404.1 1923620 R 693978 CDS YP_004046405.1 313207228 10002524 1924351..1925349 1 NC_014738.1 COGs: COG2378 transcriptional regulator protein; KEGG: rbi:RB2501_07125 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1925349 10002524 Riean_1744 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046405.1 1924351 D 693978 CDS YP_004046406.1 313207229 10002525 complement(1925419..1926921) 1 NC_014738.1 COGs: COG0531 Amino acid transporter; InterPro IPR000358: IPR004841: IPR002293; KEGG: fjo:Fjoh_1930 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: Amino acid permease-associated region; PFAM: Amino acid permease; TC 2.A.3; amino acid/polyamine/organocation transporter, apc superfamily 1926921 10002525 Riean_1745 Riemerella anatipestifer ATCC 11845 = DSM 15868 amino acid/polyamine/organocation transporter, apc superfamily YP_004046406.1 1925419 R 693978 CDS YP_004046407.1 313207230 10002526 1927121..1927789 1 NC_014738.1 COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: fba:FIC_00603 ribosyl nicotinamide transporter, PnuC-like protein; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: Ribosyl nicotinamide transporter, pnuC-like protein; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter pnuc 1927789 10002526 Riean_1746 Riemerella anatipestifer ATCC 11845 = DSM 15868 nicotinamide mononucleotide transporter pnuc YP_004046407.1 1927121 D 693978 CDS YP_004046408.1 313207231 10002527 1927793..1928029 1 NC_014738.1 KEGG: fba:FIC_01457 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1928029 10002527 Riean_1747 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046408.1 1927793 D 693978 CDS YP_004046409.1 313207232 10002528 1928128..1931298 1 NC_014738.1 InterPro IPR012910: IPR000531; KEGG: bfs:BF1992 outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor plug 1931298 10002528 Riean_1748 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004046409.1 1928128 D 693978 CDS YP_004046410.1 313207233 10002529 1931310..1932782 1 NC_014738.1 KEGG: bfs:BF1993 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SusD family; hypothetical protein 1932782 10002529 Riean_1749 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046410.1 1931310 D 693978 CDS YP_004046411.1 313207234 10002530 1932791..1933699 1 NC_014738.1 KEGG: bfs:BF1994 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1933699 10002530 Riean_1750 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046411.1 1932791 D 693978 CDS YP_004046412.1 313207235 10002531 1933706..1934617 1 NC_014738.1 KEGG: bfs:BF1995 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1934617 10002531 Riean_1751 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046412.1 1933706 D 693978 CDS YP_004046413.1 313207236 10002532 1934632..1935240 1 NC_014738.1 KEGG: bfs:BF1996 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1935240 10002532 Riean_1752 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046413.1 1934632 D 693978 CDS YP_004046414.1 313207237 10002533 1935258..1936439 1 NC_014738.1 KEGG: gfo:GFO_2515 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1936439 10002533 Riean_1753 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046414.1 1935258 D 693978 CDS YP_004046415.1 313207238 10002534 1936475..1937236 1 NC_014738.1 InterPro IPR003305; KEGG: fba:FIC_00723 hypothetical protein; PFAM: Carbohydrate-binding CenC domain protein; SPTR: Putative uncharacterized protein; PFAM: Carbohydrate binding domain; carbohydrate-binding cenc domain-containing protein 1937236 10002534 Riean_1754 Riemerella anatipestifer ATCC 11845 = DSM 15868 carbohydrate-binding cenc domain-containing protein YP_004046415.1 1936475 D 693978 CDS YP_004046416.1 313207239 10002535 1937247..1938410 1 NC_014738.1 InterPro IPR018976; KEGG: gfo:GFO_2514 hypothetical protein; PFAM: Peptidase M75, Imelysin; SPTR: Putative uncharacterized protein; PFAM: Imelysin; peptidase m75, imelysin 1938410 10002535 Riean_1755 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptidase m75, imelysin YP_004046416.1 1937247 D 693978 CDS YP_004046417.1 313207240 10002536 1938400..1939773 1 NC_014738.1 InterPro IPR011020; KEGG: gfo:GFO_2513 vitamin K-dependent gamma-carboxylase; SMART: HTTM domain protein; SPTR: Vitamin K-dependent gamma-carboxylase; PFAM: Vitamin K-dependent gamma-carboxylase; httm domain-containing protein 1939773 10002536 Riean_1756 Riemerella anatipestifer ATCC 11845 = DSM 15868 httm domain-containing protein YP_004046417.1 1938400 D 693978 CDS YP_004046418.1 313207241 10002537 1939754..1941967 1 NC_014738.1 COGs: COG4772 Outer membrane receptor for Fe3+-dicitrate; InterPro IPR012910: IPR000531; KEGG: gfo:GFO_2512 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent outer membrane receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor 1941967 10002537 Riean_1757 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004046418.1 1939754 D 693978 CDS YP_004046419.1 313207242 10002538 complement(1942069..1943187) 1 NC_014738.1 KEGG: chu:CHU_0515 leucine-rich repeat-containing protein; SPTR: Putative uncharacterized protein; hypothetical protein 1943187 10002538 Riean_1758 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046419.1 1942069 R 693978 CDS YP_004046420.1 313207243 10002539 1943523..1944095 1 NC_014738.1 KEGG: cat:CA2559_05150 DNA mismatch repair protein; SPTR: Putative uncharacterized protein; PFAM: PepSY-associated TM helix; DNA mismatch repair protein 1944095 10002539 Riean_1759 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA mismatch repair protein YP_004046420.1 1943523 D 693978 CDS YP_004046421.1 313207244 10002540 complement(1944323..1944709) 1 NC_014738.1 KEGG: bvu:BVU_2672 hypothetical protein; SPTR: Histone-like bacterial DNA-binding protein; PFAM: Bacterial DNA-binding protein; TIGRFAM: DNA-binding protein, histone-like, putative; hypothetical protein 1944709 10002540 Riean_1760 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046421.1 1944323 R 693978 CDS YP_004046422.1 313207245 10002541 complement(1944740..1946503) 1 NC_014738.1 KEGG: str:Sterm_1739 outer membrane autotransporter barrel domain protein; SPTR: Outer membrane autotransporter barrel domain protein; hypothetical protein 1946503 10002541 Riean_1761 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046422.1 1944740 R 693978 CDS YP_004046423.1 313207246 10002542 complement(1947056..1948357) 1 NC_014738.1 InterPro IPR000408: IPR001296; KEGG: fba:FIC_00716 TPR/glycosyl transferase domain protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; group 1 glycosyl transferase 1948357 10002542 Riean_1762 Riemerella anatipestifer ATCC 11845 = DSM 15868 group 1 glycosyl transferase YP_004046423.1 1947056 R 693978 CDS YP_004046424.1 313207247 10002543 complement(1948344..1950869) 1 NC_014738.1 KEGG: fba:FIC_00715 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial membrane protein YfhO; hypothetical protein 1950869 10002543 Riean_1763 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046424.1 1948344 R 693978 CDS YP_004046425.1 313207248 10002544 complement(1950895..1951116) 1 NC_014738.1 KEGG: fba:FIC_00714 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1951116 10002544 Riean_1764 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046425.1 1950895 R 693978 CDS YP_004046426.1 313207249 10002545 complement(1951207..1952256) 1 NC_014738.1 KEGG: fba:FIC_00713 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1952256 10002545 Riean_1765 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046426.1 1951207 R 693978 CDS YP_004046427.1 313207250 10002546 complement(1952295..1953071) 1 NC_014738.1 COGs: COG0566 rRNA methylase; InterPro IPR013123: IPR001537: IPR004441; KEGG: fba:FIC_01848 rRNA methylase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: rRNA methylase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; RNA methyltransferase, trmh family, group 3 1953071 10002546 Riean_1766 Riemerella anatipestifer ATCC 11845 = DSM 15868 RNA methyltransferase, trmh family, group 3 YP_004046427.1 1952295 R 693978 CDS YP_004046428.1 313207251 10002547 complement(1953082..1953546) 1 NC_014738.1 KEGG: fba:FIC_01849 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1953546 10002547 Riean_1767 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046428.1 1953082 R 693978 CDS YP_004046429.1 313207252 10002548 1953762..1954766 1 NC_014738.1 COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR016366; KEGG: fba:FIC_01850 MoxR-like ATPase in aerotolerance operon; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: MoxR family ATPase; PFAM: ATPase family associated with various cellular activities (AAA); ATPase 1954766 10002548 Riean_1768 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATPase YP_004046429.1 1953762 D 693978 CDS YP_004046430.1 313207253 10002549 1954797..1955660 1 NC_014738.1 COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881: IPR002035; KEGG: fba:FIC_01851 hypothetical protein; PFAM: protein of unknown function DUF58; von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Probable protein of hypothetical function DUF58; PFAM: Protein of unknown function DUF58; hypothetical protein 1955660 10002549 Riean_1769 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046430.1 1954797 D 693978 CDS YP_004046431.1 313207254 10002550 1955657..1956559 1 NC_014738.1 KEGG: fba:FIC_01852 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1956559 10002550 Riean_1770 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046431.1 1955657 D 693978 CDS YP_004046432.1 313207255 10002551 1956552..1957544 1 NC_014738.1 COGs: COG1240 Mg-chelatase subunit ChlD; InterPro IPR002035; KEGG: fba:FIC_01853 aerotolerance operon BatA; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor(VWA) type A domain-containing protein; PFAM: von Willebrand factor type A domain; von willebrand factor type a 1957544 10002551 Riean_1771 Riemerella anatipestifer ATCC 11845 = DSM 15868 von willebrand factor type a YP_004046432.1 1956552 D 693978 CDS YP_004046433.1 313207256 10002552 1957569..1958576 1 NC_014738.1 InterPro IPR002035; KEGG: fba:FIC_01854 BatB; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: BatB; PFAM: von Willebrand factor type A domain; von willebrand factor type a 1958576 10002552 Riean_1772 Riemerella anatipestifer ATCC 11845 = DSM 15868 von willebrand factor type a YP_004046433.1 1957569 D 693978 CDS YP_004046434.1 313207257 10002553 1958599..1959360 1 NC_014738.1 InterPro IPR001440: IPR019734: IPR013026; KEGG: fba:FIC_01855 BatC; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: BatC; PFAM: Tetratricopeptide repeat; tetratricopeptide tpr_1 repeat-containing protein 1959360 10002553 Riean_1773 Riemerella anatipestifer ATCC 11845 = DSM 15868 tetratricopeptide tpr_1 repeat-containing protein YP_004046434.1 1958599 D 693978 CDS YP_004046435.1 313207258 10002554 1959366..1961054 1 NC_014738.1 KEGG: fba:FIC_01856 BatD; SPTR: BatD; hypothetical protein 1961054 10002554 Riean_1774 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046435.1 1959366 D 693978 CDS YP_004046436.1 313207259 10002555 1961097..1961699 1 NC_014738.1 COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: fba:FIC_01857 multiple antibiotic resistance protein MarC; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: MarC family integral membrane protein; PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; multiple antibiotic resistance (marc)-like protein 1961699 10002555 Riean_1775 Riemerella anatipestifer ATCC 11845 = DSM 15868 multiple antibiotic resistance (marc)-like protein YP_004046436.1 1961097 D 693978 CDS YP_004046437.1 313207260 10002556 1961708..1961908 1 NC_014738.1 KEGG: fba:FIC_01858 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1961908 10002556 Riean_1776 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046437.1 1961708 D 693978 CDS YP_004046438.1 313207261 10002557 complement(1961952..1962995) 1 NC_014738.1 COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658: IPR016037: IPR016303; KEGG: fba:FIC_00797 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 1962995 10002557 Riean_1777 Riemerella anatipestifer ATCC 11845 = DSM 15868 3-dehydroquinate synthase YP_004046438.1 1961952 R 693978 CDS YP_004046439.1 313207262 10002558 complement(1963057..1963536) 1 NC_014738.1 KEGG: dre:100332364 solute carrier family 35, member E1-like; SPTR: WejY; hypothetical protein 1963536 10002558 Riean_1778 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046439.1 1963057 R 693978 CDS YP_004046440.1 313207263 10002559 1963733..1964905 1 NC_014738.1 InterPro IPR002872; KEGG: fba:FIC_00798 Carbapenem antibiotics biosynthesis protein CarD; PFAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; PFAM: Proline dehydrogenase; proline dehydrogenase 1964905 10002559 Riean_1779 Riemerella anatipestifer ATCC 11845 = DSM 15868 proline dehydrogenase YP_004046440.1 1963733 D 693978 CDS YP_004046441.1 313207264 10002560 1965253..1966266 1 NC_014738.1 COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726: IPR011822; KEGG: fba:FIC_02052 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: homocysteine S-methyltransferase; SPTR: Methionine synthase-like protein; PFAM: Homocysteine S-methyltransferase; homocysteine s-methyltransferase 1966266 10002560 Riean_1780 Riemerella anatipestifer ATCC 11845 = DSM 15868 homocysteine s-methyltransferase YP_004046441.1 1965253 D 693978 CDS YP_004046442.1 313207265 10002561 1966263..1968953 1 NC_014738.1 COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterPro IPR000489: IPR003759: IPR006158: IPR004223: IPR 011822; KEGG: fba:FIC_02051 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Vitamin B12 dependent methionine synthase activation region; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; PRIAM: Methionine synthase; SPTR: Methionine synthase; TIGRFAM: methionine synthase; PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methylmalonyl-CoA mutase C-terminal domain; methionine synthase 1968953 10002561 Riean_1781 Riemerella anatipestifer ATCC 11845 = DSM 15868 methionine synthase YP_004046442.1 1966263 D 693978 CDS YP_004046443.1 313207266 10002562 1968987..1969943 1 NC_014738.1 COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171: IPR004620; KEGG: chu:CHU_1435 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; 5,10-methylenetetrahydrofolate reductase 1969943 10002562 Riean_1782 Riemerella anatipestifer ATCC 11845 = DSM 15868 5,10-methylenetetrahydrofolate reductase YP_004046443.1 1968987 D 693978 CDS YP_004046444.1 313207267 10002563 complement(1969988..1971172) 1 NC_014738.1 COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031; KEGG: fps:FP2327 3-oxoacyl-(acyl-carrier-protein) synthase; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase 1971172 10002563 Riean_1783 Riemerella anatipestifer ATCC 11845 = DSM 15868 beta-ketoacyl synthase YP_004046444.1 1969988 R 693978 CDS YP_004046445.1 313207268 10002564 1971280..1972437 1 NC_014738.1 COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR001917: IPR004839; KEGG: fjo:Fjoh_0814 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 1972437 10002564 Riean_1784 Riemerella anatipestifer ATCC 11845 = DSM 15868 8-amino-7-oxononanoate synthase YP_004046445.1 1971280 D 693978 CDS YP_004046446.1 313207269 10002565 1972442..1973059 1 NC_014738.1 COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: hmg:100211816 similar to DEHA2G24772p; PRIAM: Dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; dethiobiotin synthase 1973059 10002565 Riean_1785 Riemerella anatipestifer ATCC 11845 = DSM 15868 dethiobiotin synthase YP_004046446.1 1972442 D 693978 CDS YP_004046447.1 313207270 10002566 1973056..1974336 1 NC_014738.1 COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005814; KEGG: fps:FP2328 adenosylmethionine--8-amino-7-oxononanoatetransaminase; PFAM: aminotransferase class-III; SPTR: Adenosylmethionine--8-amino-7-oxononanoatetransa minase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; aminotransferase class-iii 1974336 10002566 Riean_1786 Riemerella anatipestifer ATCC 11845 = DSM 15868 aminotransferase class-iii YP_004046447.1 1973056 D 693978 CDS YP_004046448.1 313207271 10002567 1974385..1974948 1 NC_014738.1 KEGG: cbi:CLJ_B1455 iron chelate uptake ABC transporter, FeCT family, solute-binding protein; SPTR: SMC superfamily ATP-binding chromosome segregation protein; hypothetical protein 1974948 10002567 Riean_1787 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046448.1 1974385 D 693978 CDS YP_004046449.1 313207272 10002568 1975123..1976049 1 NC_014738.1 COGs: COG0338 Site-specific DNA methylase; InterPro IPR002052: IPR002294: IPR012327: IPR012326; KEGG: seu:SEQ_1570 DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: DNA-methyltransferase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); DNA adenine methylase 1976049 10002568 Riean_1788 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA adenine methylase YP_004046449.1 1975123 D 693978 CDS YP_004046450.1 313207273 10002569 1976062..1977126 1 NC_014738.1 COGs: COG3392 Adenine-specific DNA methylase; InterPro IPR002294: IPR012327; KEGG: brm:Bmur_1618 site-specific DNA-methyltransferase (adenine-specific); PFAM: D12 class N6 adenine-specific DNA methyltransferase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Ulcer associated adenine specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; site-specific DNA-methyltransferase (adenine-specific) 1977126 10002569 Riean_1789 Riemerella anatipestifer ATCC 11845 = DSM 15868 site-specific DNA-methyltransferase (adenine-specific) YP_004046450.1 1976062 D 693978 CDS YP_004046451.1 313207274 10002570 1977119..1978507 1 NC_014738.1 KEGG: brm:Bmur_1620 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1978507 10002570 Riean_1790 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046451.1 1977119 D 693978 CDS YP_004046452.1 313207275 10002571 complement(1978579..1979298) 1 NC_014738.1 KEGG: bfs:BF0090 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1979298 10002571 Riean_1791 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046452.1 1978579 R 693978 CDS YP_004046453.1 313207276 10002572 complement(1979328..1980383) 1 NC_014738.1 KEGG: bmy:Bm1_02870 T-cell receptor beta chain ANA 11; SPTR: T-cell receptor beta chain ANA 11, putative; hypothetical protein 1980383 10002572 Riean_1792 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046453.1 1979328 R 693978 CDS YP_004046454.1 313207277 10002573 complement(1980501..1981709) 1 NC_014738.1 COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: fba:FIC_01693 ribosomal RNA small subunit methyltransferase B; PFAM: Fmu (Sun) domain protein; SPTR: Probable sun protein; PFAM: NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; fmu (sun) domain-containing protein 1981709 10002573 Riean_1793 Riemerella anatipestifer ATCC 11845 = DSM 15868 fmu (sun) domain-containing protein YP_004046454.1 1980501 R 693978 CDS YP_004046455.1 313207278 10002574 1982031..1983461 1 NC_014738.1 COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646: IPR006674: IPR006675; KEGG: fba:FIC_02118 tRNA nucleotidyltransferase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SPTR: tRNA nucleotidyltransferase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 1983461 10002574 Riean_1794 Riemerella anatipestifer ATCC 11845 = DSM 15868 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_004046455.1 1982031 D 693978 CDS YP_004046456.1 313207279 10002575 complement(1983520..1985787) 1 NC_014738.1 COGs: COG1048 Aconitase A; InterPro IPR018136: IPR001030: IPR000573: IPR006248; KEGG: fjo:Fjoh_1952 aconitate hydratase; PFAM: aconitate hydratase domain-containing protein; SPTR: Aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, mitochondrial; aconitase 1985787 10002575 Riean_1795 Riemerella anatipestifer ATCC 11845 = DSM 15868 aconitase YP_004046456.1 1983520 R 693978 CDS YP_004046457.1 313207280 10002576 complement(1985908..1986768) 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_02534 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1986768 10002576 Riean_1796 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046457.1 1985908 R 693978 CDS YP_004046458.1 313207281 10002577 complement(1986851..1988323) 1 NC_014738.1 KEGG: fba:FIC_00729 polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1988323 10002577 Riean_1797 Riemerella anatipestifer ATCC 11845 = DSM 15868 polysaccharide biosynthesis protein YP_004046458.1 1986851 R 693978 CDS YP_004046459.1 313207282 10002578 1989210..1990058 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_02534 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 1990058 10002578 Riean_1798 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046459.1 1989210 D 693978 CDS YP_004046460.1 313207283 10002579 1990872..1991249 1 NC_014738.1 KEGG: sli:Slin_4013 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1991249 10002579 Riean_1799 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046460.1 1990872 D 693978 CDS YP_004046461.1 313207284 10002580 1991702..1992073 1 NC_014738.1 KEGG: fjo:Fjoh_0188 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 1992073 10002580 Riean_1800 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046461.1 1991702 D 693978 CDS YP_004046462.1 313207285 10002581 1992186..1993028 1 NC_014738.1 InterPro IPR006121; KEGG: fjo:Fjoh_3064 hypothetical protein; SPTR: MerP protein; PFAM: Protein of unknown function (DUF3347); hypothetical protein 1993028 10002581 Riean_1801 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046462.1 1992186 D 693978 CDS YP_004046463.1 313207286 10002582 1993029..1993586 1 NC_014738.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018062: IPR000005: IPR018060: IPR006121; KEGG: fjo:Fjoh_0190 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; transcriptional regulator, arac family 1993586 10002582 Riean_1802 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, arac family YP_004046463.1 1993029 D 693978 CDS YP_004046464.1 313207287 10002583 1993680..1994393 1 NC_014738.1 InterPro IPR006121; KEGG: aas:Aasi_1204 hypothetical protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Putative uncharacterized protein; PFAM: Heavy-metal-associated domain; heavy metal transport/detoxification protein 1994393 10002583 Riean_1803 Riemerella anatipestifer ATCC 11845 = DSM 15868 heavy metal transport/detoxification protein YP_004046464.1 1993680 D 693978 CDS YP_004046465.1 313207288 10002584 1994409..1996637 1 NC_014738.1 COGs: COG2132 Putative multicopper oxidase; InterPro IPR002355: IPR011707: IPR001117: IPR011706; KEGG: fjo:Fjoh_0192 multicopper oxidase, type 3; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; SPTR: Copper resistance protein; PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; multicopper oxidase type 3 1996637 10002584 Riean_1804 Riemerella anatipestifer ATCC 11845 = DSM 15868 multicopper oxidase type 3 YP_004046465.1 1994409 D 693978 CDS YP_004046466.1 313207289 10002585 1996985..1997326 1 NC_014738.1 InterPro IPR009241; KEGG: chu:CHU_2426 hypothetical protein; PFAM: protein of unknown function DUF891; SPTR: Putative uncharacterized protein; manually curated; PFAM: Phage derived protein Gp49-like (DUF891); hypothetical protein 1997326 10002585 Riean_1805 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046466.1 1996985 D 693978 CDS YP_004046467.1 313207290 10002586 1997307..1997612 1 NC_014738.1 InterPro IPR001387; KEGG: cch:Cag_1386 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix; transcriptional regulator, xre family 1997612 10002586 Riean_1806 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcriptional regulator, xre family YP_004046467.1 1997307 D 693978 CDS YP_004046468.1 313207291 10002587 1997796..1998593 1 NC_014738.1 COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524: IPR006121; KEGG: sat:SYN_03034 cobalt-zinc-cadmium resistance protein; PFAM: cation efflux protein; SPTR: Cation efflux protein; manually curated; PFAM: Cation efflux family; cation efflux protein 1998593 10002587 Riean_1807 Riemerella anatipestifer ATCC 11845 = DSM 15868 cation efflux protein YP_004046468.1 1997796 D 693978 CDS YP_004046469.1 313207292 10002588 1998774..1999808 1 NC_014738.1 COGs: COG2357 conserved hypothetical protein; InterPro IPR007685; KEGG: mct:MCR_1636 RelA/SpoT domain protein; PFAM: RelA/SpoT domain protein; SPTR: RelA/SpoT domain-containing protein; manually curated; PFAM: Region found in RelA / SpoT proteins; rela/spot domain-containing protein 1999808 10002588 Riean_1808 Riemerella anatipestifer ATCC 11845 = DSM 15868 rela/spot domain-containing protein YP_004046469.1 1998774 D 693978 CDS YP_004046470.1 313207293 10002589 2000115..2000459 1 NC_014738.1 KEGG: cch:Cag_0913 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phage derived protein Gp49-like (DUF891); hypothetical protein 2000459 10002589 Riean_1809 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046470.1 2000115 D 693978 CDS YP_004046471.1 313207294 10002590 2000461..2000787 1 NC_014738.1 InterPro IPR001387; KEGG: cch:Cag_0914 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 2000787 10002590 Riean_1810 Riemerella anatipestifer ATCC 11845 = DSM 15868 helix-turn-helix domain-containing protein YP_004046471.1 2000461 D 693978 CDS YP_004046472.1 313207295 10002591 2001010..2001642 1 NC_014738.1 KEGG: lmh:LMHCC_2181 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2001642 10002591 Riean_1811 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046472.1 2001010 D 693978 CDS YP_004046473.1 313207296 10002592 2001810..2002364 1 NC_014738.1 KEGG: aba:Acid345_2429 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2002364 10002592 Riean_1812 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046473.1 2001810 D 693978 CDS YP_004046474.1 313207297 10002593 2002579..2003124 1 NC_014738.1 KEGG: phe:Phep_3678 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2003124 10002593 Riean_1813 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046474.1 2002579 D 693978 CDS YP_004046475.1 313207298 10002594 2003349..2003726 1 NC_014738.1 KEGG: sli:Slin_4013 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2003726 10002594 Riean_1814 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046475.1 2003349 D 693978 CDS YP_004046476.1 313207299 10002595 2004168..2004617 1 NC_014738.1 COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: coc:Coch_1918 transcription activator effector binding; PFAM: transcription activator effector binding; SPTR: Transcription activator effector binding; PFAM: Bacterial transcription activator, effector binding domain; transcription activator effector binding protein 2004617 10002595 Riean_1815 Riemerella anatipestifer ATCC 11845 = DSM 15868 transcription activator effector binding protein YP_004046476.1 2004168 D 693978 CDS YP_004046477.1 313207300 10002596 2005439..2005816 1 NC_014738.1 KEGG: saf:SULAZ_0730 cation efflux system protein; SPTR: Cation efflux system protein; hypothetical protein 2005816 10002596 Riean_1816 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046477.1 2005439 D 693978 CDS YP_004046478.1 313207301 10002597 2006246..2007172 1 NC_014738.1 COGs: COG0338 Site-specific DNA methylase; InterPro IPR002294: IPR012327: IPR012326; KEGG: coc:Coch_2150 DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); DNA adenine methylase 2007172 10002597 Riean_1817 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA adenine methylase YP_004046478.1 2006246 D 693978 CDS YP_004046479.1 313207302 10002598 2007156..2007995 1 NC_014738.1 InterPro IPR007637: IPR021191; KEGG: tme:Tmel_0307 type II site-specific deoxyribonuclease; PFAM: DpmII restriction endonuclease; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type-2 restriction enzyme MboI; PFAM: DpnII restriction endonuclease; type ii site-specific deoxyribonuclease 2007995 10002598 Riean_1818 Riemerella anatipestifer ATCC 11845 = DSM 15868 type ii site-specific deoxyribonuclease YP_004046479.1 2007156 D 693978 CDS YP_004046480.1 313207303 10002599 2007996..2008895 1 NC_014738.1 COGs: COG0863 DNA modification methylase; InterPro IPR002052: IPR001091: IPR002941; KEGG: coc:Coch_2152 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; DNA methylase n-4/n-6 domain-containing protein 2008895 10002599 Riean_1819 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA methylase n-4/n-6 domain-containing protein YP_004046480.1 2007996 D 693978 CDS YP_004046481.1 313207304 10002600 2009052..2009882 1 NC_014738.1 InterPro IPR019115; KEGG: fba:FIC_02534 hypothetical protein; PFAM: Protein of unknown function, Porph ging; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (Porph_ging); TIGRFAM: Porphyromonas gingivalis paralogous family TIGR01200; hypothetical protein 2009882 10002600 Riean_1820 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046481.1 2009052 D 693978 CDS YP_004046482.1 313207305 10002601 2010133..2010951 1 NC_014738.1 COGs: COG2819 hydrolase of the alpha/beta superfamily; InterPro IPR000801; KEGG: mxa:MXAN_6056 esterase; PFAM: esterase; SPTR: Putative esterase; PFAM: Putative esterase; esterase 2010951 10002601 Riean_1821 Riemerella anatipestifer ATCC 11845 = DSM 15868 esterase YP_004046482.1 2010133 D 693978 CDS YP_004046483.1 313207306 10002604 2014039..2014458 1 NC_014738.1 KEGG: brm:Bmur_0815 lipoprotein; SPTR: Lipoprotein; hypothetical protein 2014458 10002604 Riean_1824 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046483.1 2014039 D 693978 CDS YP_004046484.1 313207307 10002605 2015292..2016167 1 NC_014738.1 KEGG: fjo:Fjoh_3690 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2016167 10002605 Riean_1825 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046484.1 2015292 D 693978 CDS YP_004046485.1 313207308 10002606 2016425..2016931 1 NC_014738.1 KEGG: bsu:BSU26480 integral inner membrane protein; SPTR: Uncharacterized protein yrkK; integral inner membrane protein 2016931 10002606 Riean_1826 Riemerella anatipestifer ATCC 11845 = DSM 15868 integral inner membrane protein YP_004046485.1 2016425 D 693978 CDS YP_004046486.1 313207309 10002607 2017137..2017415 1 NC_014738.1 KEGG: zpr:ZPR_4526 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2017415 10002607 Riean_1827 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046486.1 2017137 D 693978 CDS YP_004046487.1 313207310 10002608 2017415..2017819 1 NC_014738.1 InterPro IPR002716; KEGG: zpr:ZPR_4525 PilT domain-containing protein; PFAM: PilT protein domain protein; SPTR: PilT domain-containing protein; PFAM: PIN domain; pilt protein domain-containing protein 2017819 10002608 Riean_1828 Riemerella anatipestifer ATCC 11845 = DSM 15868 pilt protein domain-containing protein YP_004046487.1 2017415 D 693978 CDS YP_004046488.1 313207311 10002609 2017999..2018421 1 NC_014738.1 KEGG: hor:Hore_13670 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2018421 10002609 Riean_1829 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046488.1 2017999 D 693978 CDS YP_004046489.1 313207312 10002610 2018501..2019310 1 NC_014738.1 KEGG: caa:Caka_0294 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2019310 10002610 Riean_1830 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046489.1 2018501 D 693978 CDS YP_004046490.1 313207313 10002611 2020067..2020444 1 NC_014738.1 KEGG: sli:Slin_4013 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2020444 10002611 Riean_1831 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046490.1 2020067 D 693978 CDS YP_004046491.1 313207314 10002612 2020830..2021084 1 NC_014738.1 InterPro IPR006442; KEGG: fps:FP2447 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; prevent-host-death family protein 2021084 10002612 Riean_1832 Riemerella anatipestifer ATCC 11845 = DSM 15868 prevent-host-death family protein YP_004046491.1 2020830 D 693978 CDS YP_004046492.1 313207315 10002613 2021084..2021341 1 NC_014738.1 COGs: COG4115 conserved hypothetical protein; InterPro IPR009614; KEGG: fps:FP2446 toxin YoeB; PFAM: Addiction module toxin Txe/YoeB; SPTR: Toxin YoeB; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family; addiction module toxin, txe/yoeb family 2021341 10002613 Riean_1833 Riemerella anatipestifer ATCC 11845 = DSM 15868 addiction module toxin, txe/yoeb family YP_004046492.1 2021084 D 693978 CDS YP_004046493.1 313207316 10002614 2021613..2021867 1 NC_014738.1 KEGG: gfo:GFO_0860 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2021867 10002614 Riean_1834 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046493.1 2021613 D 693978 CDS YP_004046494.1 313207317 10002615 2021857..2022288 1 NC_014738.1 KEGG: gfo:GFO_0859 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2022288 10002615 Riean_1835 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046494.1 2021857 D 693978 CDS YP_004046495.1 313207318 10002616 2022456..2022914 1 NC_014738.1 KEGG: chu:CHU_1172 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2022914 10002616 Riean_1836 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046495.1 2022456 D 693978 CDS YP_004046496.1 313207319 10002617 2023157..2023924 1 NC_014738.1 KEGG: lpn:lpg2571 hypothetical protein; SPTR: Predicted protein; hypothetical protein 2023924 10002617 Riean_1837 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046496.1 2023157 D 693978 CDS YP_004046497.1 313207320 10002618 2023945..2024763 1 NC_014738.1 KEGG: cbf:CLI_0774 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Restriction endonuclease; hypothetical protein 2024763 10002618 Riean_1838 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046497.1 2023945 D 693978 CDS YP_004046498.1 313207321 10002619 2024990..2025478 1 NC_014738.1 KEGG: api:100167619 similar to sorting nexin 13; SPTR: Cation channel family protein; hypothetical protein 2025478 10002619 Riean_1839 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046498.1 2024990 D 693978 CDS YP_004046499.1 313207322 10002620 2025739..2026794 1 NC_014738.1 KEGG: dfe:Dfer_1365 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2026794 10002620 Riean_1840 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046499.1 2025739 D 693978 CDS YP_004046500.1 313207323 10002621 2026794..2027744 1 NC_014738.1 COGs: COG4271 nucleotide-binding protein containing TIR -like domain; KEGG: dfe:Dfer_1366 nucleotide-binding protein containing TIR -like domain-like protein; SPTR: Nucleotide-binding protein containing TIR-like domain-like protein; PFAM: Predicted nucleotide-binding protein containing TIR-like domain; nucleotide-binding protein containing tir -like domain-like protein 2027744 10002621 Riean_1841 Riemerella anatipestifer ATCC 11845 = DSM 15868 nucleotide-binding protein containing tir -like domain-like protein YP_004046500.1 2026794 D 693978 CDS YP_004046501.1 313207324 10002622 2028064..2028612 1 NC_014738.1 KEGG: tet:TTHERM_01046820 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2028612 10002622 Riean_1842 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046501.1 2028064 D 693978 CDS YP_004046502.1 313207325 10002623 2028851..2029204 1 NC_014738.1 KEGG: pmr:PMI1365 lipoprotein; SPTR: Putative uncharacterized protein; lipoprotein 2029204 10002623 Riean_1843 Riemerella anatipestifer ATCC 11845 = DSM 15868 lipoprotein YP_004046502.1 2028851 D 693978 CDS YP_004046503.1 313207326 10002624 2029240..2029479 1 NC_014738.1 KEGG: fsu:Fisuc_0877 chromosome segregation and condensation protein ScpA; hypothetical protein 2029479 10002624 Riean_1844 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046503.1 2029240 D 693978 CDS YP_004046504.1 313207327 10002625 2029919..2030191 1 NC_014738.1 KEGG: cdl:CDR20291_0311 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2030191 10002625 Riean_1845 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046504.1 2029919 D 693978 CDS YP_004046505.1 313207328 10002626 2030365..2030991 1 NC_014738.1 KEGG: cpi:Cpin_2804 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2030991 10002626 Riean_1846 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046505.1 2030365 D 693978 CDS YP_004046506.1 313207329 10002627 2030988..2031086 1 NC_014738.1 hypothetical protein 2031086 10002627 Riean_1847 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046506.1 2030988 D 693978 CDS YP_004046507.1 313207330 10002628 complement(2031098..2031280) 1 NC_014738.1 hypothetical protein 2031280 10002628 Riean_1848 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046507.1 2031098 R 693978 CDS YP_004046508.1 313207331 10002629 2031290..2031697 1 NC_014738.1 KEGG: cat:CA2559_09948 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2031697 10002629 Riean_1849 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046508.1 2031290 D 693978 CDS YP_004046509.1 313207332 10002630 2031701..2032294 1 NC_014738.1 KEGG: cla:Cla_0345 hypothetical protein; SPTR: RloE; hypothetical protein 2032294 10002630 Riean_1850 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046509.1 2031701 D 693978 CDS YP_004046510.1 313207333 10002631 2032454..2033842 1 NC_014738.1 InterPro IPR011704: IPR003593; KEGG: hmo:HM1_2017 GTPase subunit of restriction endonuclease, putative; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: GTPase subunit of restriction endonuclease, putative; PFAM: AAA domain (dynein-related subfamily); ATPase 2033842 10002631 Riean_1851 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATPase YP_004046510.1 2032454 D 693978 CDS YP_004046511.1 313207334 10002632 2033839..2035212 1 NC_014738.1 KEGG: hmo:HM1_2016 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2035212 10002632 Riean_1852 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046511.1 2033839 D 693978 CDS YP_004046512.1 313207335 10002633 2035223..2035315 1 NC_014738.1 manually curated; hypothetical protein 2035315 10002633 Riean_1853 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046512.1 2035223 D 693978 CDS YP_004046513.1 313207336 10002634 2035334..2035801 1 NC_014738.1 KEGG: fba:FIC_02534 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2035801 10002634 Riean_1854 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046513.1 2035334 D 693978 CDS YP_004046514.1 313207337 10002635 2036012..2036470 1 NC_014738.1 KEGG: fba:FIC_00171 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2036470 10002635 Riean_1855 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046514.1 2036012 D 693978 CDS YP_004046515.1 313207338 10002636 2036530..2037078 1 NC_014738.1 KEGG: fjo:Fjoh_2154 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 2037078 10002636 Riean_1856 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046515.1 2036530 D 693978 CDS YP_004046516.1 313207339 10002637 2037103..2037801 1 NC_014738.1 KEGG: abb:ABBFA_000121 SH3 domain protein; SPTR: Putative uncharacterized protein; hypothetical protein 2037801 10002637 Riean_1857 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046516.1 2037103 D 693978 CDS YP_004046517.1 313207340 10002638 2037851..2038657 1 NC_014738.1 KEGG: pph:Ppha_0958 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2038657 10002638 Riean_1858 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046517.1 2037851 D 693978 CDS YP_004046518.1 313207341 10002639 2038674..2039060 1 NC_014738.1 KEGG: pfa:PF11_0057 conserved Plasmodium protein; SPTR: Putative uncharacterized protein; hypothetical protein 2039060 10002639 Riean_1859 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046518.1 2038674 D 693978 CDS YP_004046519.1 313207342 10002640 2039157..2039795 1 NC_014738.1 KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2039795 10002640 Riean_1860 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046519.1 2039157 D 693978 CDS YP_004046520.1 313207343 10002641 2039822..2040526 1 NC_014738.1 KEGG: fjo:Fjoh_2152 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 2040526 10002641 Riean_1861 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046520.1 2039822 D 693978 CDS YP_004046521.1 313207344 10002642 complement(2040596..2041270) 1 NC_014738.1 COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907; KEGG: fba:FIC_01464 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; endopeptidase clp 2041270 10002642 Riean_1862 Riemerella anatipestifer ATCC 11845 = DSM 15868 endopeptidase clp YP_004046521.1 2040596 R 693978 CDS YP_004046522.1 313207345 10002643 complement(2041350..2043272) 1 NC_014738.1 COGs: COG0358 DNA primase; InterPro IPR002694: IPR013264: IPR006171: IPR006154: IPR 006295; KEGG: fba:FIC_01465 DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein; SPTR: DNA primase; TIGRFAM: DNA primase; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core; DNA primase 2043272 10002643 Riean_1863 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA primase YP_004046522.1 2041350 R 693978 CDS YP_004046523.1 313207346 10002644 complement(2043288..2043965) 1 NC_014738.1 COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: fba:FIC_01630 DedA protein; PFAM: SNARE associated Golgi protein; SPTR: Protein DedA; PFAM: SNARE associated Golgi protein; hypothetical protein 2043965 10002644 Riean_1864 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046523.1 2043288 R 693978 CDS YP_004046524.1 313207347 10002645 complement(2044043..2045173) 1 NC_014738.1 COGs: COG1186 Protein chain release factor B; InterPro IPR005139: IPR000352: IPR004374; KEGG: fba:FIC_01629 peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: Peptide chain release factor RF2; TIGRFAM: peptide chain release factor 2; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 2045173 10002645 Riean_1865 Riemerella anatipestifer ATCC 11845 = DSM 15868 peptide chain release factor 2 YP_004046524.1 2044043 R 693978 CDS YP_004046525.1 313207348 10002646 complement(2045228..2046565) 1 NC_014738.1 COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: fba:FIC_01319 NorM-like multidrug efflux protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Possible MATE family multi antimicrobial extrusion protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: efflux protein, MATE family; mate efflux family protein 2046565 10002646 Riean_1866 Riemerella anatipestifer ATCC 11845 = DSM 15868 mate efflux family protein YP_004046525.1 2045228 R 693978 CDS YP_004046526.1 313207349 10002647 complement(2046596..2047780) 1 NC_014738.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR002078: IPR003593; KEGG: fba:FIC_01320 sigma-54 dependent transcriptional regulator/response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: Sigma-54 dependent transcriptional regulator/response regulator; PFAM: Response regulator receiver domain; Sigma-54 interaction domain; two component sigma-54 specific transcriptional regulator 2047780 10002647 Riean_1867 Riemerella anatipestifer ATCC 11845 = DSM 15868 two component sigma-54 specific transcriptional regulator YP_004046526.1 2046596 R 693978 CDS YP_004046527.1 313207350 10002648 complement(2047817..2048473) 1 NC_014738.1 COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR001608: IPR011078; KEGG: fba:FIC_01321 FIG018583: protein of unknown function; PFAM: alanine racemase domain protein; SPTR: TIM-barrel fold protein; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; alanine racemase 2048473 10002648 Riean_1868 Riemerella anatipestifer ATCC 11845 = DSM 15868 alanine racemase YP_004046527.1 2047817 R 693978 CDS YP_004046528.1 313207351 10002649 complement(2048550..2048921) 1 NC_014738.1 COGs: COG1970 Large-conductance mechanosensitive channel; InterPro IPR001185: IPR019823; KEGG: coc:Coch_1956 large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; SPTR: Large conductance mechanosensitive channel protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; large conductance mechanosensitive channel protein 2048921 10002649 Riean_1869 Riemerella anatipestifer ATCC 11845 = DSM 15868 large conductance mechanosensitive channel protein YP_004046528.1 2048550 R 693978 CDS YP_004046529.1 313207352 10002650 complement(2049062..2049913) 1 NC_014738.1 COGs: COG0682 Prolipoprotein diacylglyceryltransferase; InterPro IPR001640; KEGG: fba:FIC_00528 prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2049913 10002650 Riean_1870 Riemerella anatipestifer ATCC 11845 = DSM 15868 prolipoprotein diacylglyceryl transferase YP_004046529.1 2049062 R 693978 CDS YP_004046530.1 313207353 10002651 complement(2049921..2050175) 1 NC_014738.1 COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: fba:FIC_00529 protein containing DUF37; PFAM: protein of unknown function DUF37; SPTR: UPF0161 protein HMPREF0204_0805; manually curated; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; hypothetical protein 2050175 10002651 Riean_1871 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046530.1 2049921 R 693978 CDS YP_004046531.1 313207354 10002652 2050255..2051532 1 NC_014738.1 COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959: IPR003593; KEGG: fba:FIC_00530 ATPase, AAA family; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: Recombination ATPase; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); AAA ATPase 2051532 10002652 Riean_1872 Riemerella anatipestifer ATCC 11845 = DSM 15868 AAA ATPase YP_004046531.1 2050255 D 693978 CDS YP_004046532.1 313207355 10002653 complement(2051529..2052140) 1 NC_014738.1 COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070: IPR004388; KEGG: fba:FIC_01191 SUA5 YciO YrdC YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SPTR: RNA binding protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; translation factor sua5 2052140 10002653 Riean_1873 Riemerella anatipestifer ATCC 11845 = DSM 15868 translation factor sua5 YP_004046532.1 2051529 R 693978 CDS YP_004046533.1 313207356 10002654 complement(2052124..2052930) 1 NC_014738.1 InterPro IPR002123; KEGG: fba:FIC_00466 hypothetical protein; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acetyltransferase; PFAM: Acyltransferase; phospholipid/glycerol acyltransferase 2052930 10002654 Riean_1874 Riemerella anatipestifer ATCC 11845 = DSM 15868 phospholipid/glycerol acyltransferase YP_004046533.1 2052124 R 693978 CDS YP_004046534.1 313207357 10002655 complement(2052959..2053579) 1 NC_014738.1 InterPro IPR000086; KEGG: fba:FIC_00465 hypothetical NUDIX hydrolase YeaB; PFAM: NUDIX hydrolase; SPTR: Hypothetical nudix hydrolase YeaB; PFAM: NUDIX domain; nudix hydrolase 2053579 10002655 Riean_1875 Riemerella anatipestifer ATCC 11845 = DSM 15868 nudix hydrolase YP_004046534.1 2052959 R 693978 CDS YP_004046535.1 313207358 10002656 complement(2053583..2054275) 1 NC_014738.1 COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037; KEGG: par:Psyc_1606 K+ uptake transporter, KtrA subunit; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: K+ uptake transporter, KtrA subunit; PFAM: TrkA-N domain; TrkA-C domain; TrkA domain-containing protein 2054275 10002656 Riean_1876 Riemerella anatipestifer ATCC 11845 = DSM 15868 TrkA domain-containing protein YP_004046535.1 2053583 R 693978 CDS YP_004046536.1 313207359 10002657 complement(2054283..2056031) 1 NC_014738.1 COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: par:Psyc_1607 K+ uptake transporter, KtrB subunit; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: K+ uptake transporter, KtrB subunit; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; h(+)-transporting two-sector ATPase 2056031 10002657 Riean_1877 Riemerella anatipestifer ATCC 11845 = DSM 15868 h(+)-transporting two-sector ATPase YP_004046536.1 2054283 R 693978 CDS YP_004046537.1 313207360 10002658 complement(2056042..2056884) 1 NC_014738.1 COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: fba:FIC_01470 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; PRIAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 2056884 10002658 Riean_1878 Riemerella anatipestifer ATCC 11845 = DSM 15868 prephenate dehydrogenase YP_004046537.1 2056042 R 693978 CDS YP_004046538.1 313207361 10002659 complement(2056884..2057255) 1 NC_014738.1 KEGG: fba:FIC_01469 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2057255 10002659 Riean_1879 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046538.1 2056884 R 693978 CDS YP_004046539.1 313207362 10002660 complement(2057255..2058445) 1 NC_014738.1 COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886: IPR007698: IPR008143; KEGG: fba:FIC_01468 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; PRIAM: Alanine dehydrogenase; SPTR: Alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; alanine dehydrogenase 2058445 10002660 Riean_1880 Riemerella anatipestifer ATCC 11845 = DSM 15868 alanine dehydrogenase YP_004046539.1 2057255 R 693978 CDS YP_004046540.1 313207363 10002661 complement(2058495..2058902) 1 NC_014738.1 COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: fba:FIC_01467 ATPase YjeE, predicted to have essential role in cell wall biosynthesis; PFAM: Uncharacterised protein family UPF0079, ATPase; SPTR: ATPase YjeE, predicted to have essential role in cell wall biosynthesis; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; hypothetical protein 2058902 10002661 Riean_1881 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046540.1 2058495 R 693978 CDS YP_004046541.1 313207364 10002662 2059379..2060032 1 NC_014738.1 KEGG: coc:Coch_1983 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2060032 10002662 Riean_1882 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046541.1 2059379 D 693978 CDS YP_004046542.1 313207365 10002663 2060154..2060987 1 NC_014738.1 InterPro IPR000326; KEGG: fjo:Fjoh_3046 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: PA-phosphatase related phosphoesterase; PFAM: PAP2 superfamily; phosphoesterase pa-phosphatase-like protein 2060987 10002663 Riean_1883 Riemerella anatipestifer ATCC 11845 = DSM 15868 phosphoesterase pa-phosphatase-like protein YP_004046542.1 2060154 D 693978 CDS YP_004046543.1 313207366 10002664 2060974..2062497 1 NC_014738.1 COGs: COG2194 membrane-associated metal-dependent hydrolase; InterPro IPR012549: IPR000917; KEGG: cpi:Cpin_4248 lipid A phosphoethanolamine transferase; PFAM: sulfatase; protein of unknown function DUF1705; SPTR: Putative uncharacterized protein; PFAM: Sulfatase; Domain of unknown function (DUF1705); sulfatase 2062497 10002664 Riean_1884 Riemerella anatipestifer ATCC 11845 = DSM 15868 sulfatase YP_004046543.1 2060974 D 693978 CDS YP_004046544.1 313207367 10002665 2062545..2065310 1 NC_014738.1 COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439: IPR017871: IPR004602; KEGG: fba:FIC_00918 excinuclease ABC subunit A; PFAM: ABC transporter related; SPTR: Excision endonuclease subunit UvrA; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC, a subunit 2065310 10002665 Riean_1885 Riemerella anatipestifer ATCC 11845 = DSM 15868 excinuclease ABC, a subunit YP_004046544.1 2062545 D 693978 CDS YP_004046545.1 313207368 10002666 complement(2065369..2067546) 1 NC_014738.1 COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910; KEGG: fba:FIC_01304 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor plug; SPTR: TonB-dependent receptor, plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; tonb-dependent receptor plug 2067546 10002666 Riean_1886 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor plug YP_004046545.1 2065369 R 693978 CDS YP_004046546.1 313207369 10002667 complement(2067573..2068382) 1 NC_014738.1 COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006218: IPR006269; KEGG: fba:FIC_01303 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase 2068382 10002667 Riean_1887 Riemerella anatipestifer ATCC 11845 = DSM 15868 2-dehydro-3-deoxyphosphooctonate aldolase YP_004046546.1 2067573 R 693978 CDS YP_004046547.1 313207370 10002668 complement(2068531..2069091) 1 NC_014738.1 COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398: IPR002052; KEGG: fba:FIC_00316 methyltransferase; PFAM: Conserved hypothetical protein CHP00095; SPTR: Possible N6-adenine-specific methyltransferase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; hypothetical protein 2069091 10002668 Riean_1888 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046547.1 2068531 R 693978 CDS YP_004046548.1 313207371 10002669 complement(2069117..2069833) 1 NC_014738.1 KEGG: fba:FIC_00317 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2069833 10002669 Riean_1889 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046548.1 2069117 R 693978 CDS YP_004046549.1 313207372 10002670 2069977..2070687 1 NC_014738.1 COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002347: IPR002198; KEGG: fba:FIC_00959 short chain dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Possible 3-hydroxybutyrate dehydrogenase; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase sdr 2070687 10002670 Riean_1890 Riemerella anatipestifer ATCC 11845 = DSM 15868 short-chain dehydrogenase/reductase sdr YP_004046549.1 2069977 D 693978 CDS YP_004046550.1 313207373 10002671 2070784..2071530 1 NC_014738.1 COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730: IPR000049: IPR012255; KEGG: fba:FIC_00960 electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein beta subunit; PFAM: Electron transfer flavoprotein domain; electron transfer flavoprotein subunits alpha/beta 2071530 10002671 Riean_1891 Riemerella anatipestifer ATCC 11845 = DSM 15868 electron transfer flavoprotein subunits alpha/beta YP_004046550.1 2070784 D 693978 CDS YP_004046551.1 313207374 10002672 2071575..2072519 1 NC_014738.1 COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730: IPR014731: IPR001308; KEGG: fba:FIC_00961 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; electron transfer flavoprotein subunit alpha 2072519 10002672 Riean_1892 Riemerella anatipestifer ATCC 11845 = DSM 15868 electron transfer flavoprotein subunit alpha YP_004046551.1 2071575 D 693978 CDS YP_004046552.1 313207375 10002673 2072592..2073188 1 NC_014738.1 COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: fba:FIC_00963 hypothetical protein; PFAM: protein of unknown function DUF151; SPTR: Protein of hypothetical function DUF151; PFAM: Uncharacterised ACR, COG1259; hypothetical protein 2073188 10002673 Riean_1893 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046552.1 2072592 D 693978 CDS YP_004046553.1 313207376 10002674 2073200..2074459 1 NC_014738.1 InterPro IPR004740; KEGG: fba:FIC_00964 xanthosine permease; SPTR: Xanthosine permease; TIGRFAM: nucleoside transporter; PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter; nucleoside transporter 2074459 10002674 Riean_1894 Riemerella anatipestifer ATCC 11845 = DSM 15868 nucleoside transporter YP_004046553.1 2073200 D 693978 CDS YP_004046554.1 313207377 10002675 2074578..2075072 1 NC_014738.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: fba:FIC_01826 RNA polymerase ECF-type sigma factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase, sigma-24 subunit, ecf subfamily 2075072 10002675 Riean_1895 Riemerella anatipestifer ATCC 11845 = DSM 15868 RNA polymerase, sigma-24 subunit, ecf subfamily YP_004046554.1 2074578 D 693978 CDS YP_004046555.1 313207378 10002676 2075065..2075724 1 NC_014738.1 KEGG: fba:FIC_01827 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2075724 10002676 Riean_1896 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046555.1 2075065 D 693978 CDS YP_004046556.1 313207379 10002677 2075819..2076349 1 NC_014738.1 COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: lbf:LBF_2069 NADPH dehydrogenase; PFAM: NAD(P)H dehydrogenase (quinone); SPTR: NAD(P)H dehydrogenase (Quinone); PFAM: Flavodoxin-like fold; nad(p)h dehydrogenase (quinone) 2076349 10002677 Riean_1897 Riemerella anatipestifer ATCC 11845 = DSM 15868 nad(p)h dehydrogenase (quinone) YP_004046556.1 2075819 D 693978 CDS YP_004046557.1 313207380 10002678 2076349..2078202 1 NC_014738.1 COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006036: IPR006153: IPR003148: IPR004771; KEGG: ppd:Ppro_2060 potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; SPTR: CPA2 family potassium:proton (K+:H+) antiporter; TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; potassium efflux system protein 2078202 10002678 Riean_1898 Riemerella anatipestifer ATCC 11845 = DSM 15868 potassium efflux system protein YP_004046557.1 2076349 D 693978 CDS YP_004046558.1 313207381 10002679 2078431..2080299 1 NC_014738.1 COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910: IPR000531; KEGG: fps:FP1457 TonB-dependent outer membrane receptorprecursor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative TonB-dependent outer membrane receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; tonb-dependent receptor 2080299 10002679 Riean_1899 Riemerella anatipestifer ATCC 11845 = DSM 15868 tonb-dependent receptor YP_004046558.1 2078431 D 693978 CDS YP_004046559.1 313207382 10002680 2080312..2081358 1 NC_014738.1 KEGG: fjo:Fjoh_0092 hypothetical protein; SPTR: Putative surface layer protein; hypothetical protein 2081358 10002680 Riean_1900 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046559.1 2080312 D 693978 CDS YP_004046560.1 313207383 10002681 complement(2081359..2082264) 1 NC_014738.1 COGs: COG1295 membrane protein; InterPro IPR004664: IPR017039; KEGG: fba:FIC_01541 ribonuclease BN; PFAM: ribonuclease BN; SPTR: Ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease bn 2082264 10002681 Riean_1901 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribonuclease bn YP_004046560.1 2081359 R 693978 CDS YP_004046561.1 313207384 10002682 2082313..2082786 1 NC_014738.1 COGs: COG1576 conserved hypothetical protein; InterPro IPR003742; KEGG: fba:FIC_01542 SpoT methyltransferase superfamily protein; PFAM: protein of unknown function DUF163; SPTR: Ribosomal RNA large subunit methyltransferase H; PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; hypothetical protein 2082786 10002682 Riean_1902 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046561.1 2082313 D 693978 CDS YP_004046562.1 313207385 10002683 2082983..2085934 1 NC_014738.1 KEGG: chu:CHU_2460 hypothetical protein; SPTR: SprB; hypothetical protein 2085934 10002683 Riean_1903 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046562.1 2082983 D 693978 CDS YP_004046563.1 313207386 10002684 2085954..2086478 1 NC_014738.1 KEGG: glo:Glov_3503 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2086478 10002684 Riean_1904 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046563.1 2085954 D 693978 CDS YP_004046564.1 313207387 10002685 complement(2086551..2087783) 1 NC_014738.1 InterPro IPR011701; KEGG: fba:FIC_02356 transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily permease; PFAM: Bacterial protein of unknown function (DUF894); major facilitator superfamily protein 2087783 10002685 Riean_1905 Riemerella anatipestifer ATCC 11845 = DSM 15868 major facilitator superfamily protein YP_004046564.1 2086551 R 693978 CDS YP_004046565.1 313207388 10002686 complement(2087806..2089308) 1 NC_014738.1 InterPro IPR004993: IPR020845; KEGG: fba:FIC_02354 auxin-regulated protein; PFAM: GH3 auxin-responsive promoter; SPTR: GH3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; gh3 auxin-responsive promoter 2089308 10002686 Riean_1906 Riemerella anatipestifer ATCC 11845 = DSM 15868 gh3 auxin-responsive promoter YP_004046565.1 2087806 R 693978 CDS YP_004046566.1 313207389 10002687 2089465..2090412 1 NC_014738.1 COGs: COG0492 Thioredoxin reductase; InterPro IPR000103: IPR013027: IPR005982; KEGG: fba:FIC_00891 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase 2090412 10002687 Riean_1907 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioredoxin reductase YP_004046566.1 2089465 D 693978 CDS YP_004046567.1 313207390 10002688 2090569..2090931 1 NC_014738.1 COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: fba:FIC_00892 CrcB-like protein; PFAM: Camphor resistance CrcB protein; SPTR: Protein crcB homolog; TIGRFAM: CrcB protein; PFAM: CrcB-like protein; TIGRFAM: crcB protein; camphor resistance protein crcb 2090931 10002688 Riean_1908 Riemerella anatipestifer ATCC 11845 = DSM 15868 camphor resistance protein crcb YP_004046567.1 2090569 D 693978 CDS YP_004046568.1 313207391 10002690 2091264..2092421 1 NC_014738.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: rbi:RB2501_14074 hypothetical protein; PFAM: integrase family protein; SPTR: Putative uncharacterized protein; PFAM: Phage integrase family; integrase family protein 2092421 10002690 Riean_1909 Riemerella anatipestifer ATCC 11845 = DSM 15868 integrase family protein YP_004046568.1 2091264 D 693978 CDS YP_004046569.1 313207392 10002691 complement(2092460..2092642) 1 NC_014738.1 InterPro IPR001387; KEGG: pmr:PMI1060 fimbrial operon regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Cryptic phage CTXphi transcriptional repressor RstR; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 2092642 10002691 Riean_1910 Riemerella anatipestifer ATCC 11845 = DSM 15868 helix-turn-helix domain-containing protein YP_004046569.1 2092460 R 693978 CDS YP_004046570.1 313207393 10002692 complement(2092642..2092983) 1 NC_014738.1 KEGG: fps:FP0798 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2092983 10002692 Riean_1911 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046570.1 2092642 R 693978 CDS YP_004046571.1 313207394 10002693 complement(2093305..2093916) 1 NC_014738.1 KEGG: pfh:PFHG_04404 conserved hypothetical protein; SPTR: Septation ring formation regulator EzrA; hypothetical protein 2093916 10002693 Riean_1912 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046571.1 2093305 R 693978 CDS YP_004046572.1 313207395 10002694 2094282..2094560 1 NC_014738.1 InterPro IPR001387; KEGG: bfs:BF0462 regulatory protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 2094560 10002694 Riean_1913 Riemerella anatipestifer ATCC 11845 = DSM 15868 helix-turn-helix domain-containing protein YP_004046572.1 2094282 D 693978 CDS YP_004046573.1 313207396 10002695 2094582..2094929 1 NC_014738.1 KEGG: sun:SUN_1078 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2094929 10002695 Riean_1914 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046573.1 2094582 D 693978 CDS YP_004046574.1 313207397 10002696 complement(2095171..2095725) 1 NC_014738.1 COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: lsg:lse_1590 cell wall hydrolase/autolysin family protein; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: Cell wall hydrolase/autolysin family protein; PFAM: N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 2095725 10002696 Riean_1915 Riemerella anatipestifer ATCC 11845 = DSM 15868 cell wall hydrolase/autolysin YP_004046574.1 2095171 R 693978 CDS YP_004046575.1 313207398 10002697 complement(2095748..2096326) 1 NC_014738.1 KEGG: ddi:DDB_G0270444 WD40 repeat-containing protein; SPTR: Probable inactive protein kinase DDB_G0270444; hypothetical protein 2096326 10002697 Riean_1916 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046575.1 2095748 R 693978 CDS YP_004046576.1 313207399 10002698 complement(2096316..2096837) 1 NC_014738.1 KEGG: coc:Coch_0862 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: toxin secretion/phage lysis holin; hypothetical protein 2096837 10002698 Riean_1917 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046576.1 2096316 R 693978 CDS YP_004046577.1 313207400 10002699 complement(2096834..2097166) 1 NC_014738.1 KEGG: fjo:Fjoh_1911 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2097166 10002699 Riean_1918 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046577.1 2096834 R 693978 CDS YP_004046578.1 313207401 10002700 complement(2097150..2097473) 1 NC_014738.1 KEGG: pfa:PFI1720w Gametocyte-implicated protein (Fragment); SPTR: Gametocyte-implicated protein; hypothetical protein 2097473 10002700 Riean_1919 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046578.1 2097150 R 693978 CDS YP_004046579.1 313207402 10002701 complement(2097500..2101393) 1 NC_014738.1 KEGG: gfo:GFO_2425 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: phage minor structural protein, N-terminal region; hypothetical protein 2101393 10002701 Riean_1920 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046579.1 2097500 R 693978 CDS YP_004046580.1 313207403 10002702 complement(2101381..2102484) 1 NC_014738.1 KEGG: bwe:BcerKBAB4_5441 carbohydrate-binding CenC domain-containing protein; SPTR: Putative uncharacterized protein; hypothetical protein 2102484 10002702 Riean_1921 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046580.1 2101381 R 693978 CDS YP_004046581.1 313207404 10002703 complement(2102481..2102912) 1 NC_014738.1 KEGG: pdi:BDI_0894 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2102912 10002703 Riean_1922 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046581.1 2102481 R 693978 CDS YP_004046582.1 313207405 10002704 2102969..2103262 1 NC_014738.1 COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: dfe:Dfer_2131 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2136); hypothetical protein 2103262 10002704 Riean_1923 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046582.1 2102969 D 693978 CDS YP_004046583.1 313207406 10002705 2103259..2103621 1 NC_014738.1 InterPro IPR001387; KEGG: dfe:Dfer_2132 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 2103621 10002705 Riean_1924 Riemerella anatipestifer ATCC 11845 = DSM 15868 helix-turn-helix domain-containing protein YP_004046583.1 2103259 D 693978 CDS YP_004046584.1 313207407 10002706 complement(2103624..2107805) 1 NC_014738.1 COGs: COG3941 Mu-like prophage protein; InterPro IPR013491; KEGG: pdi:BDI_0893 viral A-type inclusion protein; SPTR: Putative uncharacterized protein; TIGRFAM: phage tape measure protein; TIGRFAM: tape measure domain; phage tape measure protein 2107805 10002706 Riean_1925 Riemerella anatipestifer ATCC 11845 = DSM 15868 phage tape measure protein YP_004046584.1 2103624 R 693978 CDS YP_004046585.1 313207408 10002707 2107991..2108392 1 NC_014738.1 KEGG: pdi:BDI_0772 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2108392 10002707 Riean_1926 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046585.1 2107991 D 693978 CDS YP_004046586.1 313207409 10002708 complement(2108717..2109592) 1 NC_014738.1 COGs: COG4823 Abortive infection bacteriophage resistance protein; InterPro IPR011664; KEGG: fps:FP0069 hypothetical protein; PFAM: Abi family protein; SPTR: Conserved hypothetical phage AbiD protein; PFAM: Abi-like protein; abi family protein 2109592 10002708 Riean_1927 Riemerella anatipestifer ATCC 11845 = DSM 15868 abi family protein YP_004046586.1 2108717 R 693978 CDS YP_004046587.1 313207410 10002709 2109831..2110151 1 NC_014738.1 KEGG: hma:pNG6181 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2110151 10002709 Riean_1928 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046587.1 2109831 D 693978 CDS YP_004046588.1 313207411 10002710 2110154..2110867 1 NC_014738.1 COGs: COG3561 Phage anti-repressor protein; InterPro IPR013557: IPR005039; KEGG: coc:Coch_0879 phage antirepressor protein; PFAM: AntA/AntB antirepressor domain protein; phage antirepressor protein; SPTR: Phage antirepressor protein; PFAM: AntA/AntB antirepressor; Phage antirepressor protein KilAC domain; anta/antb antirepressor domain-containing protein 2110867 10002710 Riean_1929 Riemerella anatipestifer ATCC 11845 = DSM 15868 anta/antb antirepressor domain-containing protein YP_004046588.1 2110154 D 693978 CDS YP_004046589.1 313207412 10002711 complement(2111038..2111223) 1 NC_014738.1 KEGG: cse:Cseg_0870 preprotein translocase subunit SecA; SPTR: Putative uncharacterized protein; hypothetical protein 2111223 10002711 Riean_1930 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046589.1 2111038 R 693978 CDS YP_004046590.1 313207413 10002712 complement(2111241..2111702) 1 NC_014738.1 KEGG: wpi:WPa_0098 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2111702 10002712 Riean_1931 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046590.1 2111241 R 693978 CDS YP_004046591.1 313207414 10002713 complement(2111782..2112288) 1 NC_014738.1 KEGG: dap:Dacet_2258 threonine dehydratase; SPTR: Putative uncharacterized protein; hypothetical protein 2112288 10002713 Riean_1932 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046591.1 2111782 R 693978 CDS YP_004046592.1 313207415 10002714 complement(2112316..2112726) 1 NC_014738.1 KEGG: gfo:GFO_2432 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2112726 10002714 Riean_1933 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046592.1 2112316 R 693978 CDS YP_004046593.1 313207416 10002715 complement(2112723..2113166) 1 NC_014738.1 KEGG: gfo:GFO_2433 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2113166 10002715 Riean_1934 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046593.1 2112723 R 693978 CDS YP_004046594.1 313207417 10002716 complement(2113157..2113480) 1 NC_014738.1 KEGG: mbr:MONBRDRAFT_38740 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2113480 10002716 Riean_1935 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046594.1 2113157 R 693978 CDS YP_004046595.1 313207418 10002717 complement(2113474..2113797) 1 NC_014738.1 KEGG: pdi:BDI_0886 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2113797 10002717 Riean_1936 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046595.1 2113474 R 693978 CDS YP_004046596.1 313207419 10002718 complement(2113797..2114879) 1 NC_014738.1 KEGG: gfo:GFO_2436 hypothetical protein; SPTR: Phage major capsid protein E; hypothetical protein 2114879 10002718 Riean_1937 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046596.1 2113797 R 693978 CDS YP_004046597.1 313207420 10002719 complement(2114900..2115265) 1 NC_014738.1 KEGG: lsp:Bsph_2123 oligopeptide ABC transporter (oligopeptide-binding protein); SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase; hypothetical protein 2115265 10002719 Riean_1938 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046597.1 2114900 R 693978 CDS YP_004046598.1 313207421 10002720 complement(2115269..2115925) 1 NC_014738.1 KEGG: pmo:Pmob_1350 SMC domain-containing protein; SPTR: Putative uncharacterized protein; hypothetical protein 2115925 10002720 Riean_1939 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046598.1 2115269 R 693978 CDS YP_004046599.1 313207422 10002721 2116058..2116324 1 NC_014738.1 KEGG: ppp:PHYPADRAFT_99946 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2116324 10002721 Riean_1940 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046599.1 2116058 D 693978 CDS YP_004046600.1 313207423 10002722 2116337..2116567 1 NC_014738.1 KEGG: msy:MS53_0438 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2116567 10002722 Riean_1941 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046600.1 2116337 D 693978 CDS YP_004046601.1 313207424 10002723 2116852..2117001 1 NC_014738.1 hypothetical protein 2117001 10002723 Riean_1942 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046601.1 2116852 D 693978 CDS YP_004046602.1 313207425 10002724 2116983..2117186 1 NC_014738.1 KEGG: zro:ZYRO0G02288g hypothetical protein; hypothetical protein 2117186 10002724 Riean_1943 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046602.1 2116983 D 693978 CDS YP_004046603.1 313207426 10002725 complement(2117181..2118224) 1 NC_014738.1 KEGG: gfo:GFO_2441 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2118224 10002725 Riean_1944 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046603.1 2117181 R 693978 CDS YP_004046604.1 313207427 10002726 complement(2118224..2119582) 1 NC_014738.1 InterPro IPR021145; KEGG: pdi:BDI_0880 hypothetical protein; PFAM: Bacteriophage portal protein, SPP1 Gp6-like; SPTR: Phage portal protein, SPP1 Gp6-like; PFAM: Phage portal protein, SPP1 Gp6-like; TIGRFAM: phage portal protein, SPP1 family; bacteriophage portal protein, spp1 gp6 2119582 10002726 Riean_1945 Riemerella anatipestifer ATCC 11845 = DSM 15868 bacteriophage portal protein, spp1 gp6 YP_004046604.1 2118224 R 693978 CDS YP_004046605.1 313207428 10002727 complement(2119696..2120994) 1 NC_014738.1 COGs: COG1783 Phage terminase large subunit; InterPro IPR006437; KEGG: pdi:BDI_0879 phage large subunit terminase; SPTR: Phage large subunit terminase; TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: Phage terminase large subunit; TIGRFAM: phage terminase, large subunit, PBSX family; pbsx family phage terminase large subunit 2120994 10002727 Riean_1946 Riemerella anatipestifer ATCC 11845 = DSM 15868 pbsx family phage terminase large subunit YP_004046605.1 2119696 R 693978 CDS YP_004046606.1 313207429 10002728 complement(2121089..2121571) 1 NC_014738.1 KEGG: enc:ECL_03566 phage terminase small subunit; SPTR: Putative uncharacterized protein; phage terminase small subunit 2121571 10002728 Riean_1947 Riemerella anatipestifer ATCC 11845 = DSM 15868 phage terminase small subunit YP_004046606.1 2121089 R 693978 CDS YP_004046607.1 313207430 10002729 complement(2121561..2122286) 1 NC_014738.1 KEGG: pdi:BDI_0877 DNA methylase; SPTR: Putative uncharacterized protein; DNA methylase 2122286 10002729 Riean_1948 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA methylase YP_004046607.1 2121561 R 693978 CDS YP_004046608.1 313207431 10002730 complement(2122261..2122965) 1 NC_014738.1 KEGG: pdi:BDI_0876 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phosphoadenosine phosphosulfate reductase family; hypothetical protein 2122965 10002730 Riean_1949 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046608.1 2122261 R 693978 CDS YP_004046609.1 313207432 10002731 complement(2122972..2123106) 1 NC_014738.1 KEGG: rcu:RCOM_0046320 40S ribosomal protein S8, putative; hypothetical protein 2123106 10002731 Riean_1950 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046609.1 2122972 R 693978 CDS YP_004046610.1 313207433 10002732 complement(2123138..2123596) 1 NC_014738.1 KEGG: apa:APP7_0121 carboxy-terminal protease; SPTR: Putative uncharacterized protein; hypothetical protein 2123596 10002732 Riean_1951 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046610.1 2123138 R 693978 CDS YP_004046611.1 313207434 10002733 complement(2123593..2124021) 1 NC_014738.1 InterPro IPR008713; KEGG: apa:APP7_0483 protein NinG; PFAM: Lambda NinG family protein; SPTR: Hypothetical bacteriophage protein; PFAM: Bacteriophage Lambda NinG protein; lambda ning family protein 2124021 10002733 Riean_1952 Riemerella anatipestifer ATCC 11845 = DSM 15868 lambda ning family protein YP_004046611.1 2123593 R 693978 CDS YP_004046612.1 313207435 10002734 complement(2124124..2124438) 1 NC_014738.1 KEGG: pdi:BDI_0847 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2693); hypothetical protein 2124438 10002734 Riean_1953 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046612.1 2124124 R 693978 CDS YP_004046613.1 313207436 10002735 complement(2124501..2125250) 1 NC_014738.1 COGs: COG3645 Uncharacterized phage-encoded protein; InterPro IPR013557: IPR005039; KEGG: coc:Coch_0879 phage antirepressor protein; PFAM: phage antirepressor protein; AntA/AntB antirepressor domain protein; SPTR: Phage antirepressor protein; PFAM: AntA/AntB antirepressor; Phage antirepressor protein KilAC domain; phage antirepressor protein 2125250 10002735 Riean_1954 Riemerella anatipestifer ATCC 11845 = DSM 15868 phage antirepressor protein YP_004046613.1 2124501 R 693978 CDS YP_004046614.1 313207437 10002736 complement(2125253..2125573) 1 NC_014738.1 KEGG: hma:pNG6181 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2125573 10002736 Riean_1955 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046614.1 2125253 R 693978 CDS YP_004046615.1 313207438 10002737 complement(2126147..2126971) 1 NC_014738.1 InterPro IPR001711; KEGG: ecg:E2348C_0995 predicted DNA-damage-inducible protein; SPTR: DNA-damage-inducible protein D; DNA-damage-inducible protein 2126971 10002737 Riean_1956 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA-damage-inducible protein YP_004046615.1 2126147 R 693978 CDS YP_004046616.1 313207439 10002738 complement(2126979..2127197) 1 NC_014738.1 KEGG: cbr:CBG16111 Hypothetical protein CBG16111; SPTR: Putative uncharacterized protein; hypothetical protein 2127197 10002738 Riean_1957 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046616.1 2126979 R 693978 CDS YP_004046617.1 313207440 10002739 complement(2127213..2127392) 1 NC_014738.1 KEGG: mmq:MmarC5_0255 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2127392 10002739 Riean_1958 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046617.1 2127213 R 693978 CDS YP_004046618.1 313207441 10002740 complement(2127422..2127577) 1 NC_014738.1 SPTR: Putative uncharacterized protein; hypothetical protein 2127577 10002740 Riean_1959 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046618.1 2127422 R 693978 CDS YP_004046619.1 313207442 10002741 complement(2127761..2128510) 1 NC_014738.1 KEGG: brm:Bmur_1603 TPR repeat-containing protein; SPTR: TPR repeat-containing protein; hypothetical protein 2128510 10002741 Riean_1960 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046619.1 2127761 R 693978 CDS YP_004046620.1 313207443 10002742 complement(2128534..2128779) 1 NC_014738.1 KEGG: ppf:Pput_3405 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF551); hypothetical protein 2128779 10002742 Riean_1961 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046620.1 2128534 R 693978 CDS YP_004046621.1 313207444 10002743 complement(2128779..2129234) 1 NC_014738.1 KEGG: ppg:PputGB1_3470 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2129234 10002743 Riean_1962 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046621.1 2128779 R 693978 CDS YP_004046622.1 313207445 10002744 complement(2129236..2129532) 1 NC_014738.1 InterPro IPR004518; KEGG: sha:SH1788 hypothetical protein; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: DNA binding protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; mazg nucleotide pyrophosphohydrolase 2129532 10002744 Riean_1963 Riemerella anatipestifer ATCC 11845 = DSM 15868 mazg nucleotide pyrophosphohydrolase YP_004046622.1 2129236 R 693978 CDS YP_004046623.1 313207446 10002745 complement(2129538..2129642) 1 NC_014738.1 hypothetical protein 2129642 10002745 Riean_1964 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046623.1 2129538 R 693978 CDS YP_004046624.1 313207447 10002746 complement(2129639..2129785) 1 NC_014738.1 hypothetical protein 2129785 10002746 Riean_1965 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046624.1 2129639 R 693978 CDS YP_004046625.1 313207448 10002747 complement(2129789..2129956) 1 NC_014738.1 KEGG: pfh:PFHG_04941 conserved hypothetical protein; SPTR: (+)-delta-cadinene synthase; hypothetical protein 2129956 10002747 Riean_1966 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046625.1 2129789 R 693978 CDS YP_004046626.1 313207449 10002748 complement(2130177..2130989) 1 NC_014738.1 KEGG: gfo:GFO_2454 hypothetical protein; SPTR: Phage-related protein; PFAM: Phosphoadenosine phosphosulfate reductase family; hypothetical protein 2130989 10002748 Riean_1967 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046626.1 2130177 R 693978 CDS YP_004046627.1 313207450 10002749 complement(2131015..2131302) 1 NC_014738.1 KEGG: gfo:GFO_2470 DNA-methyltransferase; SPTR: Putative uncharacterized protein; DNA-methyltransferase 2131302 10002749 Riean_1968 Riemerella anatipestifer ATCC 11845 = DSM 15868 DNA-methyltransferase YP_004046627.1 2131015 R 693978 CDS YP_004046628.1 313207451 10002750 complement(2131299..2131463) 1 NC_014738.1 KEGG: phu:Phum_PHUM250960 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2131463 10002750 Riean_1969 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046628.1 2131299 R 693978 CDS YP_004046629.1 313207452 10002751 complement(2131412..2131735) 1 NC_014738.1 KEGG: osa:4344300 hypothetical protein; SPTR: Os07g0681000 protein; hypothetical protein 2131735 10002751 Riean_1970 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046629.1 2131412 R 693978 CDS YP_004046630.1 313207453 10002752 complement(2131689..2131979) 1 NC_014738.1 KEGG: ptm:GSPATT00035610001 hypothetical protein; SPTR: Chromosome undetermined scaffold_153, whole genome shotgun sequence; hypothetical protein 2131979 10002752 Riean_1971 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046630.1 2131689 R 693978 CDS YP_004046631.1 313207454 10002753 complement(2131954..2133009) 1 NC_014738.1 KEGG: rle:RL3945 phage DNA primase/helicase; SPTR: Putative uncharacterized protein; hypothetical protein 2133009 10002753 Riean_1972 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046631.1 2131954 R 693978 CDS YP_004046632.1 313207455 10002754 complement(2133022..2133798) 1 NC_014738.1 KEGG: tit:Thit_1405 primosome, DnaD subunit; SPTR: Primosome, DnaD subunit; PFAM: Conserved phage C-terminus (Phg_2220_C); TIGRFAM: phage conserved hypothetical protein, C-terminal domain; hypothetical protein 2133798 10002754 Riean_1973 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046632.1 2133022 R 693978 CDS YP_004046633.1 313207456 10002755 complement(2133919..2134098) 1 NC_014738.1 hypothetical protein 2134098 10002755 Riean_1974 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046633.1 2133919 R 693978 CDS YP_004046634.1 313207457 10002756 complement(2134102..2134398) 1 NC_014738.1 KEGG: pfd:PFDG_01262 hypothetical protein similar to ABC transporter; SPTR: ABC transporter, (Heavy metal transporter family); hypothetical protein 2134398 10002756 Riean_1975 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046634.1 2134102 R 693978 CDS YP_004046635.1 313207458 10002757 complement(2134423..2135181) 1 NC_014738.1 InterPro IPR019080; KEGG: pml:ATP_00063 hypothetical protein; PFAM: YqaJ viral recombinase family; SPTR: Putative uncharacterized protein M215R; PFAM: YqaJ-like viral recombinase domain; yqaj viral recombinase family 2135181 10002757 Riean_1976 Riemerella anatipestifer ATCC 11845 = DSM 15868 yqaj viral recombinase family YP_004046635.1 2134423 R 693978 CDS YP_004046636.1 313207459 10002758 complement(2135181..2135753) 1 NC_014738.1 InterPro IPR007499; KEGG: seu:SEQ_0801 essential recombination function protein; PFAM: ERF family protein; SPTR: Putative essential recombination function protein; PFAM: ERF superfamily; erf family protein 2135753 10002758 Riean_1977 Riemerella anatipestifer ATCC 11845 = DSM 15868 erf family protein YP_004046636.1 2135181 R 693978 CDS YP_004046637.1 313207460 10002759 complement(2135868..2136053) 1 NC_014738.1 hypothetical protein 2136053 10002759 Riean_1978 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046637.1 2135868 R 693978 CDS YP_004046638.1 313207461 10002760 complement(2136150..2136464) 1 NC_014738.1 KEGG: tva:TVAG_419420 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2136464 10002760 Riean_1979 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046638.1 2136150 R 693978 CDS YP_004046639.1 313207462 10002761 complement(2136520..2136729) 1 NC_014738.1 KEGG: ath:AT3G56230 speckle-type POZ protein-related; hypothetical protein 2136729 10002761 Riean_1980 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046639.1 2136520 R 693978 CDS YP_004046640.1 313207463 10002762 complement(2136726..2136905) 1 NC_014738.1 KEGG: eli:ELI_03690 ATP-dependent Lon protease; SPTR: ATP-dependent Lon protease; ATP-dependent lon protease 2136905 10002762 Riean_1981 Riemerella anatipestifer ATCC 11845 = DSM 15868 ATP-dependent lon protease YP_004046640.1 2136726 R 693978 CDS YP_004046641.1 313207464 10002763 2137025..2137591 1 NC_014738.1 KEGG: bth:BT_0841 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2137591 10002763 Riean_1982 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046641.1 2137025 D 693978 CDS YP_004046642.1 313207465 10002764 complement(2137512..2137820) 1 NC_014738.1 KEGG: mcp:MCAP_0265 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2137820 10002764 Riean_1983 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046642.1 2137512 R 693978 CDS YP_004046643.1 313207466 10002765 2137861..2138619 1 NC_014738.1 KEGG: pdi:BDI_0844 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2138619 10002765 Riean_1984 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046643.1 2137861 D 693978 CDS YP_004046644.1 313207467 10002766 2138634..2139086 1 NC_014738.1 KEGG: mvo:Mvol_0293 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2139086 10002766 Riean_1985 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046644.1 2138634 D 693978 CDS YP_004046645.1 313207468 10002767 2139083..2139352 1 NC_014738.1 KEGG: fba:FIC_01930 dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: Similar to trehalose-6-phosphate phosphorylase; hypothetical protein 2139352 10002767 Riean_1986 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046645.1 2139083 D 693978 CDS YP_004046646.1 313207469 10002768 2139933..2140943 1 NC_014738.1 KEGG: coc:Coch_1075 hypothetical protein; SPTR: Putative toxin-antitoxin system protein; hypothetical protein 2140943 10002768 Riean_1987 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046646.1 2139933 D 693978 CDS YP_004046647.1 313207470 10002769 2141837..2142526 1 NC_014738.1 KEGG: pfd:PFDG_03865 predicted protein; SPTR: Putative uncharacterized protein; hypothetical protein 2142526 10002769 Riean_1988 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046647.1 2141837 D 693978 CDS YP_004046648.1 313207471 10002770 2142532..2143278 1 NC_014738.1 KEGG: coc:Coch_1872 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2143278 10002770 Riean_1989 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046648.1 2142532 D 693978 CDS YP_004046649.1 313207472 10002771 2143315..2144076 1 NC_014738.1 KEGG: fba:FIC_01038 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2144076 10002771 Riean_1990 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046649.1 2143315 D 693978 CDS YP_004046650.1 313207473 10002772 complement(2144113..2144667) 1 NC_014738.1 COGs: COG0233 Ribosome recycling factor; InterPro IPR002661: IPR015998; KEGG: fba:FIC_01287 ribosome recycling factor; PFAM: ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: ribosome recycling factor; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor 2144667 10002772 Riean_1991 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribosome recycling factor YP_004046650.1 2144113 R 693978 CDS YP_004046651.1 313207474 10002773 complement(2144705..2145412) 1 NC_014738.1 COGs: COG0528 Uridylate kinase; InterPro IPR001048: IPR011817: IPR015963; KEGG: fba:FIC_01286 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; PRIAM: UMP kinase; SPTR: UMP kinase; TIGRFAM: uridylate kinase; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase 2145412 10002773 Riean_1992 Riemerella anatipestifer ATCC 11845 = DSM 15868 uridylate kinase YP_004046651.1 2144705 R 693978 CDS YP_004046652.1 313207475 10002774 2145598..2146317 1 NC_014738.1 COGs: COG0130 Pseudouridine synthase; InterPro IPR002501: IPR014780; KEGG: fba:FIC_00938 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: Probable tRNA pseudouridine synthase; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase b 2146317 10002774 Riean_1993 Riemerella anatipestifer ATCC 11845 = DSM 15868 tRNA pseudouridine synthase b YP_004046652.1 2145598 D 693978 CDS YP_004046653.1 313207476 10002775 2146322..2146882 1 NC_014738.1 KEGG: ddi:DDB_G0276325 hypothetical protein; SPTR: Outer membrane fimbrial usher protein; hypothetical protein 2146882 10002775 Riean_1994 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046653.1 2146322 D 693978 CDS YP_004046654.1 313207477 10002776 2146883..2147608 1 NC_014738.1 COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942: IPR006145: IPR018496: IPR000748; KEGG: fba:FIC_00939 pseudouridine synthase, Rsu; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; ribosomal large subunit pseudouridine synthase f 2147608 10002776 Riean_1995 Riemerella anatipestifer ATCC 11845 = DSM 15868 ribosomal large subunit pseudouridine synthase f YP_004046654.1 2146883 D 693978 CDS YP_004046655.1 313207478 10002777 complement(2147605..2148060) 1 NC_014738.1 InterPro IPR006674; KEGG: cpi:Cpin_6571 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: Metal dependent phosphohydrolase; metal-dependent phosphohydrolase hd sub domain 2148060 10002777 Riean_1996 Riemerella anatipestifer ATCC 11845 = DSM 15868 metal-dependent phosphohydrolase hd sub domain YP_004046655.1 2147605 R 693978 CDS YP_004046656.1 313207479 10002778 complement(2148109..2148495) 1 NC_014738.1 COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: phe:Phep_2501 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: Long-chain acyl-CoA thioester hydrolase family protein; PFAM: Thioesterase superfamily; thioesterase superfamily protein 2148495 10002778 Riean_1997 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioesterase superfamily protein YP_004046656.1 2148109 R 693978 CDS YP_004046657.1 313207480 10002779 complement(2148543..2150216) 1 NC_014738.1 COGs: COG0531 Amino acid transporter; InterPro IPR004841: IPR002293; KEGG: fba:FIC_00996 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: Amino aciD-transporting permease; PFAM: Amino acid permease; TC 2.A.3; amino acid/polyamine/organocation transporter, apc superfamily 2150216 10002779 Riean_1998 Riemerella anatipestifer ATCC 11845 = DSM 15868 amino acid/polyamine/organocation transporter, apc superfamily YP_004046657.1 2148543 R 693978 CDS YP_004046658.1 313207481 10002780 2150341..2153859 1 NC_014738.1 KEGG: fba:FIC_00997 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2153859 10002780 Riean_1999 Riemerella anatipestifer ATCC 11845 = DSM 15868 hypothetical protein YP_004046658.1 2150341 D 693978 CDS YP_004046659.1 313207482 10002781 2153893..2154585 1 NC_014738.1 COGs: COG3340 Peptidase E; InterPro IPR005320; KEGG: fba:FIC_00534 peptidase E; PFAM: peptidase S51 dipeptidase E; PRIAM: Dipeptidase E; SPTR: Dipeptidase E; PFAM: Peptidase family S51; dipeptidase e 2154585 10002781 Riean_2000 Riemerella anatipestifer ATCC 11845 = DSM 15868 dipeptidase e YP_004046659.1 2153893 D 693978 CDS YP_004046660.1 313207483 10002782 complement(2154596..2155003) 1 NC_014738.1 COGs: COG0824 thioesterase; InterPro IPR006683: IPR006684; KEGG: fba:FIC_00535 4-hydroxybenzoyl-CoA thioesterase family active site; PFAM: thioesterase superfamily protein; SPTR: 4-hydroxybenzoyl-CoA thioesterase family active site; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; thioesterase superfamily protein 2155003 10002782 Riean_2001 Riemerella anatipestifer ATCC 11845 = DSM 15868 thioesterase superfamily protein YP_004046660.1 2154596 R 693978 CDS