-- dump date 20140620_034530 -- class Genbank::CDS -- table cds_note -- id note YP_005389786.1 COG1146 Ferredoxin YP_005389787.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_005389788.1 COG0590 Cytosine/adenosine deaminases YP_005389789.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_005389790.1 COG4520 Surface antigen YP_005389791.1 COG1881 Phospholipid-binding protein YP_005389792.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_005389796.1 COG0178 Excinuclease ATPase subunit YP_005389797.1 COG0629 Single-stranded DNA-binding protein YP_005389800.1 COG3772 Phage-related lysozyme (muraminidase) YP_005389802.1 COG1872 Uncharacterized conserved protein YP_005389803.1 COG0326 Molecular chaperone, HSP90 family YP_005389804.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_005389805.1 COG2958 Uncharacterized protein conserved in bacteria YP_005389806.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005389807.1 COG0536 Predicted GTPase YP_005389808.1 COG0372 Citrate synthase YP_005389810.1 COG1573 Uracil-DNA glycosylase YP_005389811.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005389814.1 COG2890 Methylase of polypeptide chain release factors YP_005389815.1 COG0009 Putative translation factor (SUA5) YP_005389816.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_005389817.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_005389818.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005389819.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005389820.1 COG1636 Uncharacterized protein conserved in bacteria YP_005389821.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005389822.1 COG4391 Uncharacterized protein conserved in bacteria YP_005389823.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_005389824.1 COG0267 Ribosomal protein L33 YP_005389825.1 COG0228 Ribosomal protein S16 YP_005389826.1 COG3023 Negative regulator of beta-lactamase expression YP_005389827.1 COG0321 Lipoate-protein ligase B YP_005389828.1 COG1434 Uncharacterized conserved protein YP_005389829.1 COG3004 Na+/H+ antiporter YP_005389830.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_005389831.1 COG2927 DNA polymerase III, chi subunit YP_005389832.1 COG0795 Predicted permeases YP_005389833.1 COG3041 Uncharacterized protein conserved in bacteria YP_005389834.1 COG3077 DNA-damage-inducible protein J YP_005389835.1 COG0671 Membrane-associated phospholipid phosphatase YP_005389836.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_005389837.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_005389839.1 COG1680 Beta-lactamase class C and other penicillin binding proteins. Potential operon. YP_005389841.1 COG3577 Predicted aspartyl protease YP_005389842.1 COG0718 Uncharacterized protein conserved in bacteria YP_005389843.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005389845.1 COG3288 NAD/NADP transhydrogenase alpha subunit. Potential operon. YP_005389846.1 COG3288 NAD/NADP transhydrogenase alpha subunit. Potential operon. YP_005389847.1 COG0782 Transcription elongation factor YP_005389848.1 COG0170 Dolichol kinase YP_005389849.1 COG0358 DNA primase (bacterial type) YP_005389850.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005389851.1 COG0101 Pseudouridylate synthase YP_005389855.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_005389856.1 COG1678 Putative transcriptional regulator YP_005389857.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005389859.1 COG2801 Transposase and inactivated derivatives YP_005389862.1 COG1539 Dihydroneopterin aldolase YP_005389864.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_005389865.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_005389867.1 COG0500 SAM-dependent methyltransferases YP_005389868.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD YP_005389869.1 COG1651 Protein-disulfide isomerase YP_005389870.1 COG5336 Uncharacterized protein conserved in bacteria YP_005389871.1 COG0356 F0F1-type ATP synthase, subunit a YP_005389872.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005389873.1 COG0711 F0F1-type ATP synthase, subunit b YP_005389874.1 COG0711 F0F1-type ATP synthase, subunit b YP_005389879.1 COG0658 Predicted membrane metal-binding protein YP_005389880.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_005389881.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_005389882.1 COG0802 Predicted ATPase or kinase YP_005389887.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005389888.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_005389889.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_005389890.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_005389891.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_005389892.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_005389893.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005389894.1 COG1806 Uncharacterized protein conserved in bacteria YP_005389895.1 COG0407 Uroporphyrinogen-III decarboxylase YP_005389896.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_005389897.1 COG1981 Predicted membrane protein YP_005389900.1 COG0408 Coproporphyrinogen III oxidase YP_005389901.1 COG0477 Permeases of the major facilitator superfamily YP_005389902.1 COG0457 FOG: TPR repeat YP_005389906.1 COG0013 Alanyl-tRNA synthetase YP_005389912.1 COG0457 FOG: TPR repeat YP_005389914.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_005389916.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005389917.1 COG1398 Fatty-acid desaturase YP_005389918.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005389919.1 COG1129 ABC-type sugar transport system, ATPase component YP_005389920.1 COG0360 Ribosomal protein S6 YP_005389921.1 COG0238 Ribosomal protein S18 YP_005389922.1 COG0359 Ribosomal protein L9 YP_005389923.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_005389924.1 COG0465 ATP-dependent Zn proteases YP_005389925.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_005389926.1 COG3755 Uncharacterized protein conserved in bacteria YP_005389927.1 COG1565 Uncharacterized conserved protein YP_005389928.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_005389929.1 COG0668 Small-conductance mechanosensitive channel YP_005389930.1 COG0706 Preprotein translocase subunit YidC YP_005389931.1 COG0558 Phosphatidylglycerophosphate synthase YP_005389933.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005389934.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005389935.1 COG3202 ATP/ADP translocase YP_005389936.1 COG2271 Sugar phosphate permease YP_005389937.1 COG0105 Nucleoside diphosphate kinase YP_005389938.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005389939.1 COG1192 ATPases involved in chromosome partitioning YP_005389940.1 COG1475 Predicted transcriptional regulators YP_005389941.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005389943.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_005389945.1 COG0457 FOG: TPR repeat YP_005389948.1 COG0316 Uncharacterized conserved protein YP_005389949.1 COG0232 dGTP triphosphohydrolase YP_005389950.1 COG0018 Arginyl-tRNA synthetase YP_005389952.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005389954.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005389955.1 COG0717 Deoxycytidine deaminase YP_005389956.1 COG1952 Preprotein translocase subunit SecB YP_005389957.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005389958.1 COG2904 Uncharacterized protein conserved in bacteria YP_005389959.1 COG3820 Uncharacterized protein conserved in bacteria YP_005389960.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_005389961.1 COG3047 Outer membrane protein W YP_005389962.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_005389963.1 COG0477 Permeases of the major facilitator superfamily YP_005389966.1 COG1314 Preprotein translocase subunit SecG YP_005389967.1 COG1738 Uncharacterized conserved protein YP_005389969.1 COG0215 Cysteinyl-tRNA synthetase YP_005389970.1 COG0052 Ribosomal protein S2 YP_005389971.1 COG0264 Translation elongation factor Ts YP_005389972.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005389974.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_005389975.1 COG2121 Uncharacterized protein conserved in bacteria YP_005389976.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005389977.1 COG4115 Uncharacterized protein conserved in bacteria YP_005389978.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005389979.1 COG0457 FOG: TPR repeat YP_005389980.1 COG2853 Surface lipoprotein YP_005389981.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_005389983.1 COG0787 Alanine racemase YP_005389984.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_005389985.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_005389992.1 COG0227 Ribosomal protein L28 YP_005389993.1 COG0254 Ribosomal protein L31 YP_005389994.1 COG0218 Predicted GTPase YP_005389995.1 COG0548 Acetylglutamate kinase YP_005389996.1 COG3702 Type IV secretory pathway, VirB3 components YP_005389997.1 COG3451 Type IV secretory pathway, VirB4 components YP_005389998.1 COG3704 Type IV secretory pathway, VirB6 components. Potential operon. YP_005389999.1 COG3704 Type IV secretory pathway, VirB6 components. Potential operon. YP_005390000.1 COG3704 Type IV secretory pathway, VirB6 components YP_005390001.1 COG3704 Type IV secretory pathway, VirB6 components YP_005390002.1 COG3704 Type IV secretory pathway, VirB6 components YP_005390005.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005390006.1 COG0335 Ribosomal protein L19 YP_005390007.1 COG3750 Uncharacterized protein conserved in bacteria YP_005390008.1 COG0341 Preprotein translocase subunit SecF YP_005390009.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_005390010.1 COG0681 Signal peptidase I YP_005390011.1 COG0571 dsRNA-specific ribonuclease YP_005390012.1 COG1159 GTPase YP_005390013.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_005390014.1 COG0565 rRNA methylase YP_005390016.1 COG1708 Predicted nucleotidyltransferases YP_005390017.1 COG3660 Predicted nucleoside-diphosphate-sugar epimerase YP_005390018.1 COG0489 ATPases involved in chromosome partitioning YP_005390019.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005390020.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005390021.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005390022.1 COG1054 Predicted sulfurtransferase YP_005390023.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_005390024.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_005390025.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_005390026.1 COG0765 ABC-type amino acid transport system, permease component YP_005390027.1 COG0048 Ribosomal protein S12 YP_005390028.1 COG0049 Ribosomal protein S7 YP_005390029.1 COG0480 Translation elongation factors (GTPases) YP_005390030.1 COG0690 Preprotein translocase subunit SecE YP_005390031.1 COG0250 Transcription antiterminator YP_005390032.1 COG0080 Ribosomal protein L11 YP_005390033.1 COG0081 Ribosomal protein L1 YP_005390034.1 COG0244 Ribosomal protein L10 YP_005390035.1 COG0222 Ribosomal protein L7/L12 YP_005390036.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005390037.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005390039.1 COG0260 Leucyl aminopeptidase YP_005390040.1 COG1192 ATPases involved in chromosome partitioning YP_005390042.1 COG0173 Aspartyl-tRNA synthetase YP_005390044.1 COG0670 Integral membrane protein, interacts with FtsH YP_005390045.1 COG0289 Dihydrodipicolinate reductase YP_005390046.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_005390047.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_005390048.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005390049.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005390050.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_005390052.1 COG0233 Ribosome recycling factor YP_005390053.1 COG0528 Uridylate kinase YP_005390054.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_005390055.1 COG0477 Permeases of the major facilitator superfamily. Potential operon. YP_005390056.1 COG0477 Permeases of the major facilitator superfamily. Potential operon. YP_005390057.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005390059.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_005390060.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_005390061.1 COG0781 Transcription termination factor YP_005390062.1 COG0293 23S rRNA methylase YP_005390065.1 COG2867 Oligoketide cyclase/lipid transport protein YP_005390066.1 COG5508 Uncharacterized conserved small protein YP_005390067.1 COG1385 Uncharacterized protein conserved in bacteria YP_005390068.1 COG2155 Uncharacterized conserved protein YP_005390069.1 COG0841 Cation/multidrug efflux pump YP_005390070.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005390071.1 COG0470 ATPase involved in DNA replication YP_005390072.1 COG0541 Signal recognition particle GTPase YP_005390073.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_005390075.1 COG0666 FOG: Ankyrin repeat YP_005390077.1 COG1301 Na+/H+-dicarboxylate symporters YP_005390078.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_005390079.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_005390080.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005390081.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_005390082.1 COG0497 ATPase involved in DNA repair YP_005390083.1 COG4105 DNA uptake lipoprotein YP_005390085.1 COG4572 Putative cation transport regulator. Potential operon. YP_005390086.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005390087.1 COG0443 Molecular chaperone YP_005390088.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_005390092.1 COG1466 DNA polymerase III, delta subunit YP_005390093.1 COG2941 Ubiquinone biosynthesis protein COQ7 YP_005390095.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_005390098.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_005390099.1 COG0457 FOG: TPR repeat YP_005390104.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_005390105.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component YP_005390107.1 COG0633 Ferredoxin YP_005390108.1 COG0443 Molecular chaperone YP_005390109.1 COG1076 DnaJ-domain-containing proteins 1 YP_005390110.1 COG0164 Ribonuclease HII YP_005390111.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005390112.1 COG0695 Glutaredoxin and related proteins YP_005390114.1 COG0282 Acetate kinase YP_005390115.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005390119.1 COG1301 Na+/H+-dicarboxylate symporters YP_005390123.1 COG0242 N-formylmethionyl-tRNA deformylase YP_005390124.1 COG0223 Methionyl-tRNA formyltransferase YP_005390125.1 COG1485 Predicted ATPase YP_005390127.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_005390129.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005390131.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_005390132.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_005390133.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005390134.1 COG4115 Uncharacterized protein conserved in bacteria YP_005390135.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005390136.1 COG0612 Predicted Zn-dependent peptidases YP_005390137.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_005390138.1 COG0120 Ribose 5-phosphate isomerase YP_005390139.1 COG0441 Threonyl-tRNA synthetase YP_005390140.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_005390143.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005390144.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005390145.1 COG5595 Zn-ribbon-containing, possibly nucleic-acid-binding protein YP_005390149.1 COG1538 Outer membrane protein YP_005390150.1 COG3827 Uncharacterized protein conserved in bacteria YP_005390151.1 COG0666 FOG: Ankyrin repeat YP_005390152.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005390153.1 COG0793 Periplasmic protease YP_005390154.1 COG0642 Signal transduction histidine kinase YP_005390155.1 COG1729 Uncharacterized protein conserved in bacteria YP_005390157.1 COG1520 FOG: WD40-like repeat YP_005390158.1 COG0102 Ribosomal protein L13 YP_005390159.1 COG0103 Ribosomal protein S9 YP_005390160.1 COG2173 D-alanyl-D-alanine dipeptidase YP_005390161.1 COG2173 D-alanyl-D-alanine dipeptidase YP_005390162.1 COG2154 Pterin-4a-carbinolamine dehydratase YP_005390165.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005390166.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_005390167.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005390168.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_005390170.1 COG0688 Phosphatidylserine decarboxylase YP_005390171.1 COG1183 Phosphatidylserine synthase YP_005390172.1 COG1566 Multidrug resistance efflux pump YP_005390177.1 COG0271 Stress-induced morphogen (activity unknown) YP_005390178.1 COG2200 FOG: EAL domain YP_005390179.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005390180.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_005390181.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_005390182.1 COG1589 Cell division septal protein YP_005390183.1 COG0849 Actin-like ATPase involved in cell division YP_005390185.1 COG3474 Cytochrome c2 YP_005390187.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_005390189.1 COG1530 Ribonucleases G and E YP_005390190.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_005390191.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005390192.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_005390193.1 COG0708 Exonuclease III YP_005390194.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_005390195.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_005390196.1 COG1217 Predicted membrane GTPase involved in stress response YP_005390201.1 COG2825 Outer membrane protein YP_005390202.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_005390203.1 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit YP_005390204.1 COG1563 Predicted subunit of the Multisubunit Na+/H+ antiporter YP_005390207.1 COG0723 Rieske Fe-S protein YP_005390208.1 COG1290 Cytochrome b subunit of the bc complex YP_005390209.1 COG2827 Predicted endonuclease containing a URI domain YP_005390210.1 COG2857 Cytochrome c1 YP_005390211.1 COG0071 Molecular chaperone (small heat shock protein) YP_005390213.1 COG4804 Uncharacterized conserved protein YP_005390214.1 COG4804 Uncharacterized conserved protein YP_005390215.1 COG1186 Protein chain release factor B YP_005390216.1 COG0481 Membrane GTPase LepA YP_005390218.1 COG0457 FOG: TPR repeat YP_005390219.1 COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain YP_005390227.1 COG0477 Permeases of the major facilitator superfamily YP_005390228.1 COG0772 Bacterial cell division membrane protein YP_005390229.1 COG1770 Protease II YP_005390230.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005390231.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_005390233.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005390234.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_005390235.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_005390236.1 COG3504 Type IV secretory pathway, VirB9 components YP_005390237.1 COG3736 Type IV secretory pathway, component VirB8 YP_005390239.1 COG3736 Type IV secretory pathway, component VirB8 YP_005390240.1 COG3504 Type IV secretory pathway, VirB9 components YP_005390241.1 COG2948 Type IV secretory pathway, VirB10 components YP_005390242.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_005390243.1 COG3505 Type IV secretory pathway, VirD4 components YP_005390244.1 COG0248 Exopolyphosphatase YP_005390248.1 COG4695 Phage-related protein YP_005390252.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_005390253.1 COG0249 Mismatch repair ATPase (MutS family) YP_005390254.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_005390255.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005390256.1 COG1451 Predicted metal-dependent hydrolase YP_005390257.1 COG1351 Predicted alternative thymidylate synthase YP_005390258.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_005390259.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005390260.1 COG3175 Cytochrome oxidase assembly factor YP_005390262.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005390263.1 COG0531 Amino acid transporters YP_005390264.1 COG0124 Histidyl-tRNA synthetase YP_005390265.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005390266.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005390269.1 COG0811 Biopolymer transport proteins YP_005390270.1 COG0848 Biopolymer transport protein YP_005390272.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005390273.1 COG0477 Permeases of the major facilitator superfamily YP_005390274.1 COG0845 Membrane-fusion protein YP_005390275.1 COG4618 ABC-type protease/lipase transport system, ATPase and permease components YP_005390276.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_005390277.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005390281.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_005390282.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_005390284.1 COG0763 Lipid A disaccharide synthetase YP_005390286.1 COG1559 Predicted periplasmic solute-binding protein YP_005390287.1 COG1965 Protein implicated in iron transport, frataxin homolog YP_005390289.1 COG3975 Predicted protease with the C-terminal PDZ domain YP_005390291.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005390292.1 COG0550 Topoisomerase IA YP_005390293.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_005390295.1 COG0450 Peroxiredoxin YP_005390296.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_005390297.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005390298.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_005390299.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005390300.1 COG3093 Plasmid maintenance system antidote protein YP_005390301.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_005390302.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_005390303.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_005390305.1 COG0500 SAM-dependent methyltransferases YP_005390306.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005390307.1 COG0845 Membrane-fusion protein YP_005390309.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005390310.1 COG0438 Glycosyltransferase YP_005390316.1 COG0522 Ribosomal protein S4 and related proteins YP_005390317.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_005390318.1 COG1533 DNA repair photolyase YP_005390320.1 COG0457 FOG: TPR repeat YP_005390321.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_005390322.1 COG0806 RimM protein, required for 16S rRNA processing YP_005390324.1 COG1722 Exonuclease VII small subunit YP_005390325.1 COG2094 3-methyladenine DNA glycosylase YP_005390326.1 COG0759 Uncharacterized conserved protein YP_005390327.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_005390328.1 COG2827 Predicted endonuclease containing a URI domain YP_005390329.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_005390330.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_005390331.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_005390332.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_005390333.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_005390334.1 COG4765 Uncharacterized protein conserved in bacteria YP_005390335.1 COG4974 Site-specific recombinase XerD YP_005390338.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_005390339.1 COG0815 Apolipoprotein N-acyltransferase YP_005390340.1 COG1396 Predicted transcriptional regulators YP_005390341.1 COG3023 Negative regulator of beta-lactamase expression YP_005390342.1 COG2984 ABC-type uncharacterized transport system, periplasmic component YP_005390343.1 COG4120 ABC-type uncharacterized transport system, permease component YP_005390344.1 COG1101 ABC-type uncharacterized transport system, ATPase component YP_005390346.1 COG0666 FOG: Ankyrin repeat YP_005390347.1 COG0666 FOG: Ankyrin repeat YP_005390348.1 COG1495 Disulfide bond formation protein DsbB YP_005390349.1 COG1384 Lysyl-tRNA synthetase (class I) YP_005390350.1 COG0679 Predicted permeases YP_005390351.1 COG0281 Malic enzyme YP_005390354.1 COG4374 Uncharacterized protein conserved in bacteria YP_005390355.1 COG2002 Regulators of stationary/sporulation gene expression YP_005390356.1 COG0477 Permeases of the major facilitator superfamily YP_005390358.1 COG0443 Molecular chaperone YP_005390361.1 COG0039 Malate/lactate dehydrogenases YP_005390364.1 COG3202 ATP/ADP translocase YP_005390365.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_005390367.1 COG1051 ADP-ribose pyrophosphatase YP_005390369.1 COG0302 GTP cyclohydrolase I YP_005390370.1 COG0442 Prolyl-tRNA synthetase YP_005390371.1 COG3177 Uncharacterized conserved protein YP_005390373.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_005390377.1 COG2255 Holliday junction resolvasome, helicase subunit YP_005390378.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005390379.1 COG0477 Permeases of the major facilitator superfamily YP_005390380.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_005390381.1 COG0797 Lipoproteins YP_005390382.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_005390383.1 COG2917 Intracellular septation protein A YP_005390384.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_005390386.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_005390387.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_005390388.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005390389.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005390390.1 COG0756 dUTPase YP_005390391.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005390392.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005390393.1 COG2887 RecB family exonuclease YP_005390395.1 COG2071 Predicted glutamine amidotransferases YP_005390396.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_005390397.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_005390398.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_005390399.1 COG0615 Cytidylyltransferase YP_005390400.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005390401.1 COG0597 Lipoprotein signal peptidase YP_005390403.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_005390404.1 COG0772 Bacterial cell division membrane protein YP_005390405.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_005390411.1 COG0845 Membrane-fusion protein YP_005390412.1 COG1538 Outer membrane protein YP_005390413.1 COG1538 Outer membrane protein YP_005390414.1 COG0438 Glycosyltransferase YP_005390417.1 COG0253 Diaminopimelate epimerase YP_005390418.1 COG0621 2-methylthioadenine synthetase YP_005390419.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005390420.1 COG0073 EMAP domain YP_005390421.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005390424.1 COG0495 Leucyl-tRNA synthetase YP_005390426.1 COG0349 Ribonuclease D YP_005390427.1 COG2919 Septum formation initiator YP_005390428.1 COG0575 CDP-diglyceride synthetase YP_005390429.1 COG0020 Undecaprenyl pyrophosphate synthase YP_005390430.1 COG0642 Signal transduction histidine kinase YP_005390431.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005390432.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_005390433.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005390434.1 COG0691 tmRNA-binding protein YP_005390435.1 COG1651 Protein-disulfide isomerase YP_005390436.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_005390437.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_005390438.1 COG2002 Regulators of stationary/sporulation gene expression YP_005390440.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_005390441.1 COG4395 Uncharacterized protein conserved in bacteria YP_005390443.1 COG0858 Ribosome-binding factor A YP_005390444.1 COG1238 Predicted membrane protein YP_005390445.1 COG1714 Predicted membrane protein/domain YP_005390446.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_005390448.1 COG0061 Predicted sugar kinase YP_005390449.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005390450.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_005390453.1 COG0679 Predicted permeases YP_005390454.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005390455.1 COG0492 Thioredoxin reductase YP_005390458.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_005390459.1 COG0210 Superfamily I DNA and RNA helicases YP_005390461.1 COG1171 Threonine dehydratase YP_005390462.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005390464.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_005390465.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_005390466.1 COG0492 Thioredoxin reductase YP_005390468.1 COG3121 P pilus assembly protein, chaperone PapD YP_005390470.1 COG3188 P pilus assembly protein, porin PapC. Potential operon component. YP_005390471.1 COG5430 Uncharacterized secreted protein YP_005390476.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005390478.1 COG0208 Ribonucleotide reductase, beta subunit YP_005390479.1 COG1357 Uncharacterized low-complexity proteins YP_005390480.1 COG0593 ATPase involved in DNA replication initiation YP_005390483.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005390484.1 COG1109 Phosphomannomutase YP_005390486.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_005390487.1 COG1934 Uncharacterized protein conserved in bacteria YP_005390488.1 COG5375 Uncharacterized protein conserved in bacteria YP_005390489.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_005390490.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_005390491.1 COG0184 Ribosomal protein S15P/S13E YP_005390492.1 COG0130 Pseudouridine synthase YP_005390493.1 COG3202 ATP/ADP translocase YP_005390496.1 COG1396 Predicted transcriptional regulators YP_005390497.1 COG1295 Predicted membrane protein YP_005390498.1 COG0174 Glutamine synthetase YP_005390499.1 COG1496 Uncharacterized conserved protein YP_005390500.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_005390503.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_005390504.1 COG0625 Glutathione S-transferase YP_005390505.1 COG4285 Uncharacterized conserved protein YP_005390506.1 COG1268 Uncharacterized conserved protein YP_005390507.1 COG0285 Folylpolyglutamate synthase YP_005390509.1 COG0605 Superoxide dismutase YP_005390510.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_005390511.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_005390514.1 COG0790 FOG: TPR repeat, SEL1 subfamily YP_005390519.1 COG1708 Predicted nucleotidyltransferases YP_005390520.1 COG5448 Uncharacterized conserved protein YP_005390521.1 COG5449 Uncharacterized conserved protein YP_005390523.1 COG5346 Predicted membrane protein YP_005390524.1 COG0290 Translation initiation factor 3 (IF-3) YP_005390525.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_005390526.1 COG0216 Protein chain release factor A YP_005390527.1 COG0608 Single-stranded DNA-specific exonuclease YP_005390528.1 COG0500 SAM-dependent methyltransferases YP_005390529.1 COG1158 Transcription termination factor YP_005390530.1 COG0616 Periplasmic serine proteases (ClpP class) YP_005390531.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005390535.1 COG0666 FOG: Ankyrin repeat YP_005390536.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005390537.1 COG0338 Site-specific DNA methylase YP_005390539.1 COG0283 Cytidylate kinase YP_005390540.1 COG0539 Ribosomal protein S1 YP_005390541.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_005390543.1 COG0338 Site-specific DNA methylase YP_005390544.1 COG0642 Signal transduction histidine kinase YP_005390545.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005390546.1 COG3328 Transposase and inactivated derivatives YP_005390547.1 COG3328 Transposase and inactivated derivatives YP_005390550.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_005390553.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005390554.1 COG4804 Uncharacterized conserved protein YP_005390560.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_005390561.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_005390562.1 COG0217 Uncharacterized conserved protein YP_005390567.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_005390569.1 COG3676 Transposase and inactivated derivatives YP_005390571.1 COG0338 Site-specific DNA methylase YP_005390574.1 COG0500 SAM-dependent methyltransferases YP_005390575.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005390576.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_005390578.1 COG0349 Ribonuclease D YP_005390579.1 COG1723 Uncharacterized conserved protein YP_005390580.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_005390582.1 COG0642 Signal transduction histidine kinase YP_005390583.1 COG0642 Signal transduction histidine kinase YP_005390584.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_005390585.1 COG0181 Porphobilinogen deaminase YP_005390588.1 COG0180 Tryptophanyl-tRNA synthetase YP_005390589.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005390590.1 COG5622 Protein required for attachment to host cells YP_005390591.1 COG3077 DNA-damage-inducible protein J YP_005390592.1 COG2945 Predicted hydrolase of the alpha/beta superfamily YP_005390594.1 COG1587 Uroporphyrinogen-III synthase YP_005390595.1 COG1279 Lysine efflux permease YP_005390597.1 COG0477 Permeases of the major facilitator superfamily YP_005390599.1 COG3202 ATP/ADP translocase YP_005390601.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_005390602.1 COG0006 Xaa-Pro aminopeptidase YP_005390603.1 COG0531 Amino acid transporters YP_005390606.1 COG0316 Uncharacterized conserved protein YP_005390607.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005390608.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005390609.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_005390610.1 COG1959 Predicted transcriptional regulator YP_005390618.1 COG1413 FOG: HEAT repeat YP_005390620.1 COG0021 Transketolase YP_005390622.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_005390624.1 COG0113 Delta-aminolevulinic acid dehydratase YP_005390626.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_005390627.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_005390629.1 COG0305 Replicative DNA helicase YP_005390630.1 COG0814 Amino acid permeases YP_005390632.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_005390633.1 COG1357 Uncharacterized low-complexity proteins YP_005390634.1 COG0742 N6-adenine-specific methylase YP_005390635.1 COG1066 Predicted ATP-dependent serine protease YP_005390636.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005390637.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_005390639.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_005390641.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005390642.1 COG0195 Transcription elongation factor YP_005390643.1 COG0779 Uncharacterized protein conserved in bacteria YP_005390645.1 COG1959 Predicted transcriptional regulator YP_005390646.1 COG1189 Predicted rRNA methylase YP_005390647.1 COG0162 Tyrosyl-tRNA synthetase YP_005390651.1 COG0671 Membrane-associated phospholipid phosphatase YP_005390659.1 COG0671 Membrane-associated phospholipid phosphatase YP_005390662.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_005390663.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_005390664.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_005390665.1 COG1357 Uncharacterized low-complexity proteins YP_005390667.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005390669.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_005390671.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005390672.1 COG2001 Uncharacterized protein conserved in bacteria YP_005390674.1 COG0591 Na+/proline symporter YP_005390677.1 COG0322 Nuclease subunit of the excinuclease complex YP_005390678.1 COG2847 Uncharacterized protein conserved in bacteria YP_005390679.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_005390684.1 COG1708 Predicted nucleotidyltransferases YP_005390685.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005390686.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005390687.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_005390688.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_005390689.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_005390690.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005390691.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_005390692.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005390694.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005390699.1 COG1862 Preprotein translocase subunit YajC YP_005390700.1 COG0342 Preprotein translocase subunit SecD YP_005390701.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_005390702.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_005390703.1 COG0221 Inorganic pyrophosphatase YP_005390704.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_005390707.1 COG1200 RecG-like helicase YP_005390708.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005390709.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_005390710.1 COG0655 Multimeric flavodoxin WrbA YP_005390711.1 COG0655 Multimeric flavodoxin WrbA YP_005390713.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005390714.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_005390715.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_005390716.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_005390717.1 COG2938 Uncharacterized conserved protein YP_005390718.1 COG0607 Rhodanese-related sulfurtransferase YP_005390719.1 COG0593 ATPase involved in DNA replication initiation YP_005390723.1 COG3621 Patatin YP_005390724.1 COG2250 Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN YP_005390725.1 COG1708 Predicted nucleotidyltransferases YP_005390726.1 COG0012 Predicted GTPase, probable translation factor YP_005390727.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_005390729.1 COG0193 Peptidyl-tRNA hydrolase YP_005390730.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_005390733.1 COG0602 Organic radical activating enzymes YP_005390734.1 COG0291 Ribosomal protein L35 YP_005390735.1 COG0292 Ribosomal protein L20 YP_005390736.1 COG0230 Ribosomal protein L34 YP_005390742.1 COG0598 Mg2+ and Co2+ transporters YP_005390748.1 COG3173 Predicted aminoglycoside phosphotransferase YP_005390749.1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_005390750.1 COG0828 Ribosomal protein S21 YP_005390751.1 COG5590 Uncharacterized conserved protein YP_005390755.1 COG0060 Isoleucyl-tRNA synthetase YP_005390759.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_005390760.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_005390762.1 COG0477 Permeases of the major facilitator superfamily YP_005390764.1 COG3070 Regulator of competence-specific genes YP_005390765.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_005390766.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_005390767.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005390768.1 COG5342 Invasion protein B, involved in pathogenesis YP_005390770.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005390771.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005390772.1 COG0459 Chaperonin GroEL (HSP60 family) YP_005390773.1 COG0234 Co-chaperonin GroES (HSP10) YP_005390777.1 COG0689 RNase PH YP_005390778.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005390779.1 COG0628 Predicted permease YP_005390780.1 COG0593 ATPase involved in DNA replication initiation YP_005390781.1 COG0477 Permeases of the major facilitator superfamily YP_005390782.1 COG0477 Permeases of the major facilitator superfamily YP_005390783.1 COG0477 Permeases of the major facilitator superfamily YP_005390784.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005390785.1 COG0268 Ribosomal protein S20 YP_005390786.1 COG0203 Ribosomal protein L17 YP_005390787.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005390788.1 COG0100 Ribosomal protein S11 YP_005390789.1 COG0099 Ribosomal protein S13 YP_005390790.1 COG0563 Adenylate kinase and related kinases YP_005390791.1 COG0201 Preprotein translocase subunit SecY YP_005390792.1 COG0200 Ribosomal protein L15 YP_005390793.1 COG1841 Ribosomal protein L30/L7E YP_005390794.1 COG0098 Ribosomal protein S5 YP_005390795.1 COG0256 Ribosomal protein L18 YP_005390796.1 COG0097 Ribosomal protein L6P/L9E YP_005390797.1 COG0096 Ribosomal protein S8 YP_005390798.1 COG0199 Ribosomal protein S14 YP_005390799.1 COG0094 Ribosomal protein L5 YP_005390800.1 COG0198 Ribosomal protein L24 YP_005390801.1 COG0093 Ribosomal protein L14 YP_005390802.1 COG0186 Ribosomal protein S17 YP_005390803.1 COG0255 Ribosomal protein L29 YP_005390804.1 COG0197 Ribosomal protein L16/L10E YP_005390805.1 COG0092 Ribosomal protein S3 YP_005390806.1 COG0091 Ribosomal protein L22 YP_005390807.1 COG0185 Ribosomal protein S19 YP_005390808.1 COG0090 Ribosomal protein L2 YP_005390809.1 COG0089 Ribosomal protein L23 YP_005390810.1 COG0088 Ribosomal protein L4 YP_005390811.1 COG0087 Ribosomal protein L3 YP_005390812.1 COG0051 Ribosomal protein S10 YP_005390813.1 COG0050 GTPases - translation elongation factors YP_005390814.1 COG0566 rRNA methylases YP_005390816.1 COG0114 Fumarase YP_005390817.1 COG4118 Antitoxin of toxin-antitoxin stability system YP_005390819.1 COG0206 Cell division GTPase YP_005390821.1 COG4574 Serine protease inhibitor ecotin YP_005390822.1 COG0694 Thioredoxin-like proteins and domains YP_005390823.1 COG0477 Permeases of the major facilitator superfamily YP_005390824.1 COG0513 Superfamily II DNA and RNA helicases YP_005390825.1 COG1278 Cold shock proteins YP_005390827.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005390828.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005390829.1 COG1452 Organic solvent tolerance protein OstA YP_005390831.1 COG1570 Exonuclease VII, large subunit YP_005390834.1 COG0708 Exonuclease III YP_005390835.1 COG4095 Uncharacterized conserved protein YP_005390836.1 COG1160 Predicted GTPases YP_005390838.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005390841.1 COG0661 Predicted unusual protein kinase YP_005390842.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_005390843.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_005390846.1 COG4553 Poly-beta-hydroxyalkanoate depolymerase YP_005390847.1 COG0084 Mg-dependent DNase YP_005390848.1 COG0143 Methionyl-tRNA synthetase YP_005390849.1 COG0125 Thymidylate kinase YP_005390850.1 COG0477 Permeases of the major facilitator superfamily YP_005390851.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_005390852.1 COG0525 Valyl-tRNA synthetase YP_005390853.1 COG3475 LPS biosynthesis protein YP_005390854.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005390855.1 COG1322 Uncharacterized protein conserved in bacteria YP_005390856.1 COG5528 Predicted integral membrane protein YP_005390857.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_005390858.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_005390859.1 COG0603 Predicted PP-loop superfamily ATPase YP_005390860.1 COG1598 Uncharacterized conserved protein YP_005390861.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_005390863.1 COG0477 Permeases of the major facilitator superfamily YP_005390864.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_005390865.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005390867.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_005390868.1 COG1138 Cytochrome c biogenesis factor YP_005390869.1 COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain YP_005390870.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005390871.1 COG1472 Beta-glucosidase-related glycosidases YP_005390872.1 COG0789 Predicted transcriptional regulators YP_005390873.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005390876.1 COG1225 Peroxiredoxin YP_005390877.1 COG1560 Lauroyl/myristoyl acyltransferase YP_005390878.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_005390879.1 COG0739 Membrane proteins related to metalloendopeptidases YP_005390880.1 COG2961 Protein involved in catabolism of external DNA YP_005390881.1 COG3943 Virulence protein YP_005390882.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005390883.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005390884.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_005390885.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_005390887.1 COG0477 Permeases of the major facilitator superfamily YP_005390890.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_005390891.1 COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_005390892.1 COG0328 Ribonuclease HI YP_005390893.1 COG3814 Uncharacterized protein conserved in bacteria YP_005390894.1 COG3494 Uncharacterized protein conserved in bacteria YP_005390895.1 COG0237 Dephospho-CoA kinase YP_005390896.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_005390897.1 COG3346 Uncharacterized conserved protein YP_005390898.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_005390900.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_005390907.1 COG0666 FOG: Ankyrin repeat YP_005390908.1 COG0666 FOG: Ankyrin repeat YP_005390912.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_005390913.1 COG3202 ATP/ADP translocase YP_005390914.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_005390916.1 COG1253 Hemolysins and related proteins containing CBS domains YP_005390917.1 COG0319 Predicted metal-dependent hydrolase YP_005390920.1 COG0320 Lipoate synthase YP_005390921.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005390922.1 COG0400 Predicted esterase YP_005390923.1 COG0278 Glutaredoxin-related protein YP_005390924.1 COG0177 Predicted EndoIII-related endonuclease YP_005390927.1 COG5510 Predicted small secreted protein YP_005390929.1 COG0313 Predicted methyltransferases YP_005390930.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_005390931.1 COG1826 Sec-independent protein secretion pathway components YP_005390932.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_005390933.1 COG0261 Ribosomal protein L21 YP_005390934.1 COG0211 Ribosomal protein L27 YP_005390935.1 COG0527 Aspartokinases YP_005390936.1 COG1396 Predicted transcriptional regulators YP_005390938.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_005390940.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_005390941.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_005390942.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_005390943.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_005390944.1 COG2944 Predicted transcriptional regulator YP_005390945.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_005390946.1 COG0500 SAM-dependent methyltransferases YP_005390947.1 COG3637 Opacity protein and related surface antigens YP_005390948.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_005390950.1 COG3451 Type IV secretory pathway, VirB4 components YP_005390952.1 COG0172 Seryl-tRNA synthetase YP_005390953.1 COG0805 Sec-independent protein secretion pathway component TatC YP_005390954.1 COG0477 Permeases of the major facilitator superfamily YP_005390956.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_005390957.1 COG0587 DNA polymerase III, alpha subunit YP_005390963.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005390964.1 COG0552 Signal recognition particle GTPase YP_005390965.1 COG2913 Small protein A (tmRNA-binding) YP_005390966.1 COG0333 Ribosomal protein L32 YP_005390967.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_005390968.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_005390969.1 COG0795 Predicted permeases YP_005390970.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_005390971.1 COG1792 Cell shape-determining protein YP_005390972.1 COG1396 Predicted transcriptional regulators YP_005390973.1 COG0194 Guanylate kinase YP_005390974.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_005390977.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_005390978.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_005390979.1 COG0236 Acyl carrier protein YP_005390980.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_005390981.1 COG0468 RecA/RadA recombinase YP_005390982.1 COG0477 Permeases of the major facilitator superfamily YP_005390985.1 COG0486 Predicted GTPase YP_005390986.1 COG2902 NAD-specific glutamate dehydrogenase YP_005390987.1 COG1426 Uncharacterized protein conserved in bacteria YP_005390988.1 COG3027 Uncharacterized protein conserved in bacteria YP_005390989.1 COG0477 Permeases of the major facilitator superfamily YP_005390991.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_005390992.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_005390993.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_005390994.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_005390995.1 COG3671 Predicted membrane protein YP_005390996.1 COG1048 Aconitase A YP_005390997.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_005390998.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005390999.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005391000.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005391001.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_005391002.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_005391003.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005391008.1 COG2602 Beta-lactamase class D YP_005391009.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_005391010.1 COG0621 2-methylthioadenine synthetase YP_005391012.1 COG3807 Uncharacterized protein conserved in bacteria YP_005391013.1 COG0475 Kef-type K+ transport systems, membrane components YP_005391014.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_005391015.1 COG0271 Stress-induced morphogen (activity unknown) YP_005391021.1 COG0361 Translation initiation factor 1 (IF-1) YP_005391022.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_005391023.1 COG1734 DnaK suppressor protein YP_005391024.1 COG0582 Integrase YP_005391026.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005391027.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_005391028.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005391030.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_005391031.1 COG0024 Methionine aminopeptidase YP_005391032.1 COG2003 DNA repair proteins YP_005391033.1 COG2003 DNA repair proteins YP_005391034.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_005391036.1 COG3637 Opacity protein and related surface antigens YP_005391037.1 COG3637 Opacity protein and related surface antigens YP_005412604.1 COG0593 ATPase involved in DNA replication initiation YP_005412605.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_005412607.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_005412608.1 COG5464 Uncharacterized conserved protein YP_005412610.1 COG0457 FOG: TPR repeat YP_005412611.1 COG2801 Transposase and inactivated derivatives YP_005412614.1 COG1396 Predicted transcriptional regulators YP_005412616.1 COG1192 ATPases involved in chromosome partitioning YP_005412617.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain