-- dump date 20140620_034016 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002916064.1 238650214 7942330 1..825 1 NC_012730.1 COG1806 Uncharacterized protein conserved in bacteria; hypothetical protein 825 7942330 RPR_00005 Rickettsia peacockii str. Rustic hypothetical protein YP_002916064.1 1 D 562019 CDS YP_002916065.1 238650215 7942881 1043..1360 1 NC_012730.1 COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 1360 7942881 RPR_00010 Rickettsia peacockii str. Rustic thioredoxin YP_002916065.1 1043 D 562019 CDS YP_002916066.1 238650216 7942882 1371..2120 1 NC_012730.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component; O-antigen export system ATP-binding protein RfbE 2120 7942882 RPR_00015 Rickettsia peacockii str. Rustic O-antigen export system ATP-binding protein RfbE YP_002916066.1 1371 D 562019 CDS YP_002916067.1 238650217 7942883 2121..2897 1 NC_012730.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; O-antigen export system permease protein RfbA 2897 7942883 RPR_00020 Rickettsia peacockii str. Rustic O-antigen export system permease protein RfbA YP_002916067.1 2121 D 562019 CDS YP_002916068.1 238650218 7942884 2894..5995 1 NC_012730.1 undetermined function; putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase 5995 7942884 RPR_00025 Rickettsia peacockii str. Rustic putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase YP_002916068.1 2894 D 562019 CDS YP_002916069.1 238650219 7942885 complement(6040..6279) 1 NC_012730.1 COG2337 Growth inhibitor; hypothetical protein 6279 7942885 RPR_00030 Rickettsia peacockii str. Rustic hypothetical protein YP_002916069.1 6040 R 562019 CDS YP_002916070.1 238650220 7942886 complement(6625..7419) 1 NC_012730.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 7419 7942886 RPR_00035 Rickettsia peacockii str. Rustic UDP-N-acetylglucosamine acyltransferase YP_002916070.1 6625 R 562019 CDS YP_002916071.1 238650221 7942887 complement(7427..7864) 1 NC_012730.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 7864 fabZ 7942887 fabZ Rickettsia peacockii str. Rustic (3R)-hydroxymyristoyl-ACP dehydratase YP_002916071.1 7427 R 562019 CDS YP_002916072.1 238650222 7942888 complement(8060..9100) 1 NC_012730.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 9100 lpxD 7942888 lpxD Rickettsia peacockii str. Rustic UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_002916072.1 8060 R 562019 CDS YP_002916073.1 238650223 7942889 9930..10484 1 NC_012730.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily; alpha-beta hydrolase family esterase 10484 7942889 RPR_00050 Rickettsia peacockii str. Rustic alpha-beta hydrolase family esterase YP_002916073.1 9930 D 562019 CDS YP_002916074.1 238650224 7942890 complement(11128..11874) 1 NC_012730.1 COG3022 Uncharacterized protein conserved in bacteria; putative cytoplasmic protein 11874 7942890 RPR_00055 Rickettsia peacockii str. Rustic putative cytoplasmic protein YP_002916074.1 11128 R 562019 CDS YP_002916075.1 238651133 7942891 complement(12639..12881) 1 NC_012730.1 COG0776 Bacterial nucleoid DNA-binding protein; integration host factor beta-subunit 12881 himD 7942891 himD Rickettsia peacockii str. Rustic integration host factor beta-subunit YP_002916075.1 12639 R 562019 CDS YP_002916076.1 238650225 7942158 complement(13914..15290) 1 NC_012730.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 15290 rho 7942158 rho Rickettsia peacockii str. Rustic transcription termination factor Rho YP_002916076.1 13914 R 562019 CDS YP_002916077.1 238650226 7942892 complement(17042..18805) 1 NC_012730.1 COG0608 Single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease RecJ 18805 7942892 RPR_00105 Rickettsia peacockii str. Rustic single-stranded-DNA-specific exonuclease RecJ YP_002916077.1 17042 R 562019 CDS YP_002916078.1 238650227 7942893 complement(18964..20031) 1 NC_012730.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 20031 prfA 7942893 prfA Rickettsia peacockii str. Rustic peptide chain release factor 1 YP_002916078.1 18964 R 562019 CDS YP_002916079.1 238650228 7942894 complement(20164..21402) 1 NC_012730.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes; branched-chain alpha-keto acid dehydrogenase subunit E2 21402 7942894 RPR_00115 Rickettsia peacockii str. Rustic branched-chain alpha-keto acid dehydrogenase subunit E2 YP_002916079.1 20164 R 562019 CDS YP_002916080.1 238650229 7942895 complement(21548..22021) 1 NC_012730.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 22021 infC 7942895 infC Rickettsia peacockii str. Rustic translation initiation factor IF-3 YP_002916080.1 21548 R 562019 CDS YP_002916081.1 238650230 7942896 complement(22172..22501) 1 NC_012730.1 COG5346 Predicted membrane protein; hypothetical protein 22501 7942896 RPR_00125 Rickettsia peacockii str. Rustic hypothetical protein YP_002916081.1 22172 R 562019 CDS YP_002916082.1 238650231 7942897 complement(22851..23135) 1 NC_012730.1 hypothetical protein 23135 7942897 RPR_00135 Rickettsia peacockii str. Rustic hypothetical protein YP_002916082.1 22851 R 562019 CDS YP_002916083.1 238650232 7942898 complement(23132..23608) 1 NC_012730.1 COG5448 Uncharacterized conserved protein; putative cytoplasmic protein 23608 7942898 RPR_00140 Rickettsia peacockii str. Rustic putative cytoplasmic protein YP_002916083.1 23132 R 562019 CDS YP_002916084.1 238650233 7942899 complement(24069..24881) 1 NC_012730.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase; biotin--protein ligase 24881 7942899 RPR_00145 Rickettsia peacockii str. Rustic biotin--protein ligase YP_002916084.1 24069 R 562019 CDS YP_002916085.1 238650234 7942900 complement(26792..27421) 1 NC_012730.1 COG0605 Superoxide dismutase; superoxide dismutase 27421 7942900 RPR_00170 Rickettsia peacockii str. Rustic superoxide dismutase YP_002916085.1 26792 R 562019 CDS YP_002916086.1 238650235 7942901 complement(27592..28872) 1 NC_012730.1 COG0285 Folylpolyglutamate synthase; folylpolyglutamate synthase 28872 7942901 RPR_00180 Rickettsia peacockii str. Rustic folylpolyglutamate synthase YP_002916086.1 27592 R 562019 CDS YP_002916087.1 238650236 7942902 29684..30436 1 NC_012730.1 COG4285 Uncharacterized conserved protein; putative N-terminal of biotin-protein ligase 30436 7942902 RPR_00200 Rickettsia peacockii str. Rustic putative N-terminal of biotin-protein ligase YP_002916087.1 29684 D 562019 CDS YP_002916088.1 238650237 7942903 complement(30548..31216) 1 NC_012730.1 COG0625 Glutathione S-transferase; glutathione S-transferase family protein 31216 7942903 RPR_00205 Rickettsia peacockii str. Rustic glutathione S-transferase family protein YP_002916088.1 30548 R 562019 CDS YP_002916089.1 238650238 7942904 32147..34783 1 NC_012730.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 34783 7942904 RPR_00210 Rickettsia peacockii str. Rustic pyruvate phosphate dikinase YP_002916089.1 32147 D 562019 CDS YP_002916090.1 238650239 7942905 35046..36854 1 NC_012730.1 hypothetical protein 36854 7942905 RPR_00215 Rickettsia peacockii str. Rustic hypothetical protein YP_002916090.1 35046 D 562019 CDS YP_002916091.1 238650240 7942906 37090..37785 1 NC_012730.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; hypothetical protein 37785 7942906 RPR_00220 Rickettsia peacockii str. Rustic hypothetical protein YP_002916091.1 37090 D 562019 CDS YP_002916092.1 238650241 7942907 complement(37786..38190) 1 NC_012730.1 COG4113 Predicted nucleic acid-binding protein, contains PIN domain; toxin of toxin-antitoxin system 38190 7942907 RPR_00225 Rickettsia peacockii str. Rustic toxin of toxin-antitoxin system YP_002916092.1 37786 R 562019 CDS YP_002916093.1 238650242 7942908 complement(38194..38448) 1 NC_012730.1 COG4118 Antitoxin of toxin-antitoxin stability system; hypothetical protein 38448 7942908 RPR_00230 Rickettsia peacockii str. Rustic hypothetical protein YP_002916093.1 38194 R 562019 CDS YP_002916094.1 238650243 7942909 complement(38659..39210) 1 NC_012730.1 COG0242 N-formylmethionyl-tRNA deformylase; polypeptide deformylase 39210 7942909 RPR_00235 Rickettsia peacockii str. Rustic polypeptide deformylase YP_002916094.1 38659 R 562019 CDS YP_002916095.1 238650244 7942910 complement(39503..40225) 1 NC_012730.1 COG1496 Uncharacterized conserved protein; putative cytoplasmic protein 40225 7942910 RPR_00240 Rickettsia peacockii str. Rustic putative cytoplasmic protein YP_002916095.1 39503 R 562019 CDS YP_002916096.1 238650245 7942911 40224..41054 1 NC_012730.1 IPR014746 Glutamine synthetase/guanido kinase, catalytic region; Glutamine synthetase/guanido kinase, catalytic region 41054 7942911 RPR_00245 Rickettsia peacockii str. Rustic Glutamine synthetase/guanido kinase, catalytic region YP_002916096.1 40224 D 562019 CDS YP_002916097.1 238650246 7942912 complement(41204..42031) 1 NC_012730.1 COG1295 Predicted membrane protein; ribonuclease BN, putative 42031 7942912 RPR_00250 Rickettsia peacockii str. Rustic ribonuclease BN, putative YP_002916097.1 41204 R 562019 CDS YP_002916098.1 238650247 7942913 42565..42942 1 NC_012730.1 COG1396 Predicted transcriptional regulators; transcriptional regulator 42942 7942913 RPR_00255 Rickettsia peacockii str. Rustic transcriptional regulator YP_002916098.1 42565 D 562019 CDS YP_002916099.1 238650248 7942914 complement(43061..46117) 1 NC_012730.1 antigenic heat-stable 120 kDa protein (cell surface protein Sca4) 46117 7942914 RPR_00260 Rickettsia peacockii str. Rustic antigenic heat-stable 120 kDa protein (cell surface protein Sca4) YP_002916099.1 43061 R 562019 CDS YP_002916100.1 238650249 7942915 complement(46410..47945) 1 NC_012730.1 COG3202 ATP/ADP translocase; ADP,ATP carrier protein 47945 7942915 RPR_00265 Rickettsia peacockii str. Rustic ADP,ATP carrier protein YP_002916100.1 46410 R 562019 CDS YP_002916101.1 238650250 7942916 48030..49067 1 NC_012730.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; proteins in this cluster have Rickettsial repeat elements (RPE) inserts; tRNA pseudouridine synthase B 49067 truB 7942916 truB Rickettsia peacockii str. Rustic tRNA pseudouridine synthase B YP_002916101.1 48030 D 562019 CDS YP_002916102.1 238650251 7942917 49103..49378 1 NC_012730.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 49378 rpsO 7942917 rpsO Rickettsia peacockii str. Rustic 30S ribosomal protein S15 YP_002916102.1 49103 D 562019 CDS YP_002916103.1 238650252 7942918 49526..51772 1 NC_012730.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase 51772 7942918 RPR_00280 Rickettsia peacockii str. Rustic polynucleotide phosphorylase/polyadenylase YP_002916103.1 49526 D 562019 CDS YP_002916104.1 238650253 7942919 51972..52931 1 NC_012730.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation; arabinose-5-phosphate isomerase 52931 7942919 RPR_00285 Rickettsia peacockii str. Rustic arabinose-5-phosphate isomerase YP_002916104.1 51972 D 562019 CDS YP_002916105.1 238650254 7942920 52937..53533 1 NC_012730.1 COG5375 Uncharacterized protein conserved in bacteria; hypothetical protein 53533 7942920 RPR_00290 Rickettsia peacockii str. Rustic hypothetical protein YP_002916105.1 52937 D 562019 CDS YP_002916106.1 238650255 7942921 53577..54086 1 NC_012730.1 COG1934 Uncharacterized protein conserved in bacteria; hypothetical protein 54086 7942921 RPR_00295 Rickettsia peacockii str. Rustic hypothetical protein YP_002916106.1 53577 D 562019 CDS YP_002916107.1 238650256 7942922 54269..54991 1 NC_012730.1 COG1137 ABC-type (unclassified) transport system, ATPase component; ABC transporter ATP-binding protein 54991 7942922 RPR_00300 Rickettsia peacockii str. Rustic ABC transporter ATP-binding protein YP_002916107.1 54269 D 562019 CDS YP_002916108.1 238650257 7942923 55162..56550 1 NC_012730.1 COG1109 Phosphomannomutase; phosphomannomutase 56550 7942923 RPR_00310 Rickettsia peacockii str. Rustic phosphomannomutase YP_002916108.1 55162 D 562019 CDS YP_002916109.1 238650258 7942924 56621..56947 1 NC_012730.1 hypothetical protein 56947 7942924 RPR_00315 Rickettsia peacockii str. Rustic hypothetical protein YP_002916109.1 56621 D 562019 CDS YP_002916110.1 238650259 7942925 57110..58174 1 NC_012730.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 58174 miaA 7942925 miaA Rickettsia peacockii str. Rustic tRNA delta(2)-isopentenylpyrophosphate transferase YP_002916110.1 57110 D 562019 CDS YP_002916111.1 238651134 7942926 complement(60728..63106) 1 NC_012730.1 truncated homolog of RrIowa_0780; hypothetical protein 63106 7942926 RPR_00340 Rickettsia peacockii str. Rustic hypothetical protein YP_002916111.1 60728 R 562019 CDS YP_002916112.1 238650260 7942159 complement(63254..64240) 1 NC_012730.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 64240 nrdF 7942159 nrdF Rickettsia peacockii str. Rustic ribonucleotide-diphosphate reductase subunit beta YP_002916112.1 63254 R 562019 CDS YP_002916113.1 238650261 7942927 complement(65101..66924) 1 NC_012730.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 66924 7942927 RPR_00365 Rickettsia peacockii str. Rustic ribonucleotide-diphosphate reductase subunit alpha YP_002916113.1 65101 R 562019 CDS YP_002916114.1 238650262 7942928 complement(67341..67592) 1 NC_012730.1 COG3397 Uncharacterized protein conserved in bacteria; chitin binding domain-containing protein 67592 7942928 RPR_00370 Rickettsia peacockii str. Rustic chitin binding domain-containing protein YP_002916114.1 67341 R 562019 CDS YP_002916115.1 238650263 7942929 complement(67651..67968) 1 NC_012730.1 hypothetical protein 67968 7942929 RPR_00375 Rickettsia peacockii str. Rustic hypothetical protein YP_002916115.1 67651 R 562019 CDS YP_002916116.1 238650264 7942930 complement(68116..68592) 1 NC_012730.1 COG5430 Uncharacterized secreted protein; hypothetical protein 68592 7942930 RPR_00380 Rickettsia peacockii str. Rustic hypothetical protein YP_002916116.1 68116 R 562019 CDS YP_002916117.1 238650265 7942931 complement(71222..71536) 1 NC_012730.1 COG3121 P pilus assembly protein, chaperone PapD; hypothetical protein 71536 7942931 RPR_00420 Rickettsia peacockii str. Rustic hypothetical protein YP_002916117.1 71222 R 562019 CDS YP_002916118.1 238650266 7942932 complement(71646..71846) 1 NC_012730.1 COG5430 Uncharacterized secreted protein; protein U precursor 71846 7942932 RPR_00425 Rickettsia peacockii str. Rustic protein U precursor YP_002916118.1 71646 R 562019 CDS YP_002916119.1 238650267 7942933 72660..73682 1 NC_012730.1 COG0492 Thioredoxin reductase; thioredoxin reductase 73682 7942933 RPR_00435 Rickettsia peacockii str. Rustic thioredoxin reductase YP_002916119.1 72660 D 562019 CDS YP_002916120.1 238650268 7942934 73832..74926 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 74926 7942934 RPR_00440 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916120.1 73832 D 562019 CDS YP_002916121.1 238650269 7942935 75015..75881 1 NC_012730.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 75881 7942935 RPR_00445 Rickettsia peacockii str. Rustic bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_002916121.1 75015 D 562019 CDS YP_002916122.1 238650270 7942936 complement(75912..76427) 1 NC_012730.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily; carbonic anhydrase 76427 7942936 RPR_00450 Rickettsia peacockii str. Rustic carbonic anhydrase YP_002916122.1 75912 R 562019 CDS YP_002916123.1 238650271 7942937 complement(76427..77005) 1 NC_012730.1 COG1544 Ribosome-associated protein Y (PSrp-1); ribosome-associated factor Y 77005 7942937 RPR_00455 Rickettsia peacockii str. Rustic ribosome-associated factor Y YP_002916123.1 76427 R 562019 CDS YP_002916124.1 238650272 7942938 complement(77122..77430) 1 NC_012730.1 hypothetical protein 77430 7942938 RPR_00460 Rickettsia peacockii str. Rustic hypothetical protein YP_002916124.1 77122 R 562019 CDS YP_002916125.1 238650273 7942940 complement(80774..83110) 1 NC_012730.1 COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent endopeptidase Lon 83110 7942940 RPR_00490 Rickettsia peacockii str. Rustic ATP-dependent endopeptidase Lon YP_002916125.1 80774 R 562019 CDS YP_002916126.1 238650274 7942941 83196..84227 1 NC_012730.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 84227 7942941 RPR_00495 Rickettsia peacockii str. Rustic threonine dehydratase YP_002916126.1 83196 D 562019 CDS YP_002916127.1 238650275 7942942 complement(84662..85756) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 85756 7942942 RPR_00505 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916127.1 84662 R 562019 CDS YP_002916128.1 238650276 7942943 complement(86384..86545) 1 NC_012730.1 hypothetical protein 86545 7942943 RPR_00515 Rickettsia peacockii str. Rustic hypothetical protein YP_002916128.1 86384 R 562019 CDS YP_002916129.1 238650277 7942944 complement(86661..87266) 1 NC_012730.1 hypothetical protein 87266 7942944 RPR_00520 Rickettsia peacockii str. Rustic hypothetical protein YP_002916129.1 86661 R 562019 CDS YP_002916130.1 238650278 7942945 complement(87332..89293) 1 NC_012730.1 COG0210 Superfamily I DNA and RNA helicases; DNA helicase II 89293 7942945 RPR_00525 Rickettsia peacockii str. Rustic DNA helicase II YP_002916130.1 87332 R 562019 CDS YP_002916131.1 238650279 7942946 complement(89371..90216) 1 NC_012730.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyl transferase 90216 7942946 RPR_00530 Rickettsia peacockii str. Rustic glycosyl transferase YP_002916131.1 89371 R 562019 CDS YP_002916132.1 238650280 7942947 complement(90209..90556) 1 NC_012730.1 hypothetical protein 90556 7942947 RPR_00535 Rickettsia peacockii str. Rustic hypothetical protein YP_002916132.1 90209 R 562019 CDS YP_002916133.1 238650281 7942948 complement(90724..92133) 1 NC_012730.1 COG1012 NAD-dependent aldehyde dehydrogenases; succinate-semialdehyde dehydrogenase (NADP+) 92133 7942948 RPR_00540 Rickettsia peacockii str. Rustic succinate-semialdehyde dehydrogenase (NADP+) YP_002916133.1 90724 R 562019 CDS YP_002916134.1 238650282 7942949 complement(92258..92410) 1 NC_012730.1 hypothetical protein 92410 7942949 RPR_00545 Rickettsia peacockii str. Rustic hypothetical protein YP_002916134.1 92258 R 562019 CDS YP_002916135.1 238650283 7942950 complement(92519..92746) 1 NC_012730.1 hypothetical protein 92746 7942950 RPR_00550 Rickettsia peacockii str. Rustic hypothetical protein YP_002916135.1 92519 R 562019 CDS YP_002916136.1 238650284 7942951 complement(92808..93104) 1 NC_012730.1 hypothetical protein 93104 7942951 RPR_00555 Rickettsia peacockii str. Rustic hypothetical protein YP_002916136.1 92808 R 562019 CDS YP_002916137.1 238650285 7942952 complement(93324..94256) 1 NC_012730.1 COG0492 Thioredoxin reductase; thioredoxin reductase 94256 7942952 RPR_00560 Rickettsia peacockii str. Rustic thioredoxin reductase YP_002916137.1 93324 R 562019 CDS YP_002916138.1 238650286 7942953 complement(94458..95330) 1 NC_012730.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase 95330 7942953 RPR_00565 Rickettsia peacockii str. Rustic 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase YP_002916138.1 94458 R 562019 CDS YP_002916139.1 238650287 7942954 complement(95399..96328) 1 NC_012730.1 COG0679 Predicted permeases; permease 96328 7942954 RPR_00570 Rickettsia peacockii str. Rustic permease YP_002916139.1 95399 R 562019 CDS YP_002916140.1 238650288 7942955 complement(97778..99460) 1 NC_012730.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily; hypothetical protein 99460 7942955 RPR_00585 Rickettsia peacockii str. Rustic hypothetical protein YP_002916140.1 97778 R 562019 CDS YP_002916141.1 238650289 7942956 99547..100314 1 NC_012730.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 100314 ppnK 7942956 ppnK Rickettsia peacockii str. Rustic inorganic polyphosphate/ATP-NAD kinase YP_002916141.1 99547 D 562019 CDS YP_002916142.1 238650290 7942957 complement(102192..102797) 1 NC_012730.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 102797 recR 7942957 recR Rickettsia peacockii str. Rustic recombination protein RecR YP_002916142.1 102192 R 562019 CDS YP_002916143.1 238650291 7942958 complement(102955..103476) 1 NC_012730.1 COG1714 Predicted membrane protein/domain; hypothetical protein 103476 7942958 RPR_00605 Rickettsia peacockii str. Rustic hypothetical protein YP_002916143.1 102955 R 562019 CDS YP_002916144.1 238650292 7942959 103619..104053 1 NC_012730.1 COG1238 Predicted membrane protein; hypothetical protein 104053 7942959 RPR_00610 Rickettsia peacockii str. Rustic hypothetical protein YP_002916144.1 103619 D 562019 CDS YP_002916145.1 238650293 7942960 104050..104412 1 NC_012730.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 104412 rbfA 7942960 rbfA Rickettsia peacockii str. Rustic ribosome-binding factor A YP_002916145.1 104050 D 562019 CDS YP_002916146.1 238650294 7942961 105840..106475 1 NC_012730.1 COG4395 Uncharacterized protein conserved in bacteria; hypothetical protein 106475 7942961 RPR_00625 Rickettsia peacockii str. Rustic hypothetical protein YP_002916146.1 105840 D 562019 CDS YP_002916147.1 238650295 7941998 106563..108611 1 NC_012730.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases; acylamino-acid-releasing enzyme 108611 7941998 RPR_00630 Rickettsia peacockii str. Rustic acylamino-acid-releasing enzyme YP_002916147.1 106563 D 562019 CDS YP_002916148.1 238650296 7942331 109389..109643 1 NC_012730.1 COG2002 Regulators of stationary/sporulation gene expression; hypothetical protein 109643 7942331 RPR_00645 Rickettsia peacockii str. Rustic hypothetical protein YP_002916148.1 109389 D 562019 CDS YP_002916149.1 238650297 7942332 109630..110019 1 NC_012730.1 COG5611 Predicted nucleic-acid-binding protein, contains PIN domain; hypothetical protein 110019 7942332 RPR_00650 Rickettsia peacockii str. Rustic hypothetical protein YP_002916149.1 109630 D 562019 CDS YP_002916150.1 238650298 7942333 110052..111212 1 NC_012730.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 111212 sucC 7942333 sucC Rickettsia peacockii str. Rustic succinyl-CoA synthetase subunit beta YP_002916150.1 110052 D 562019 CDS YP_002916151.1 238650299 7942334 111388..112266 1 NC_012730.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 112266 7942334 RPR_00660 Rickettsia peacockii str. Rustic succinyl-CoA synthetase subunit alpha YP_002916151.1 111388 D 562019 CDS YP_002916152.1 238650300 7942335 complement(112278..113372) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 113372 7942335 RPR_00665 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916152.1 112278 R 562019 CDS YP_002916153.1 238650301 7942336 115478..116854 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 116854 7942336 RPR_00670 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit N YP_002916153.1 115478 D 562019 CDS YP_002916154.1 238650302 7942337 complement(116841..118382) 1 NC_012730.1 hypothetical protein 118382 7942337 RPR_00675 Rickettsia peacockii str. Rustic hypothetical protein YP_002916154.1 116841 R 562019 CDS YP_002916155.1 238650303 7942338 complement(118447..119463) 1 NC_012730.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 119463 7942338 RPR_00680 Rickettsia peacockii str. Rustic delta-aminolevulinic acid dehydratase YP_002916155.1 118447 R 562019 CDS YP_002916156.1 238650304 7942339 119677..120573 1 NC_012730.1 hypothetical protein 120573 7942339 RPR_00685 Rickettsia peacockii str. Rustic hypothetical protein YP_002916156.1 119677 D 562019 CDS YP_002916157.1 238650305 7942340 complement(120659..122605) 1 NC_012730.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 122605 7942340 RPR_00690 Rickettsia peacockii str. Rustic primosome assembly protein PriA YP_002916157.1 120659 R 562019 CDS YP_002916158.1 238650306 7942341 122667..123242 1 NC_012730.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; aromatic acid decarboxylase 123242 7942341 RPR_00695 Rickettsia peacockii str. Rustic aromatic acid decarboxylase YP_002916158.1 122667 D 562019 CDS YP_002916159.1 238650307 7942342 123609..125093 1 NC_012730.1 unwinds double stranded DNA; replicative DNA helicase 125093 7942342 RPR_00705 Rickettsia peacockii str. Rustic replicative DNA helicase YP_002916159.1 123609 D 562019 CDS YP_002916160.1 238650308 7942343 complement(125254..125463) 1 NC_012730.1 hypothetical protein 125463 7942343 RPR_00710 Rickettsia peacockii str. Rustic hypothetical protein YP_002916160.1 125254 R 562019 CDS YP_002916161.1 238650309 7942344 126964..127656 1 NC_012730.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; ribosomal large subunit pseudouridine synthase B 127656 7942344 RPR_00735 Rickettsia peacockii str. Rustic ribosomal large subunit pseudouridine synthase B YP_002916161.1 126964 D 562019 CDS YP_002916162.1 238650310 7942345 127703..130582 1 NC_012730.1 COG1357 Uncharacterized low-complexity proteins; hypothetical protein 130582 7942345 RPR_00740 Rickettsia peacockii str. Rustic hypothetical protein YP_002916162.1 127703 D 562019 CDS YP_002916163.1 238650311 7942346 130587..131324 1 NC_012730.1 COG0742 N6-adenine-specific methylase; hypothetical protein 131324 7942346 RPR_00745 Rickettsia peacockii str. Rustic hypothetical protein YP_002916163.1 130587 D 562019 CDS YP_002916164.1 238650312 7942347 131445..132779 1 NC_012730.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 132779 7942347 RPR_00750 Rickettsia peacockii str. Rustic DNA repair protein RadA YP_002916164.1 131445 D 562019 CDS YP_002916165.1 238650313 7942348 132776..133090 1 NC_012730.1 hypothetical protein 133090 7942348 RPR_00755 Rickettsia peacockii str. Rustic hypothetical protein YP_002916165.1 132776 D 562019 CDS YP_002916166.1 238650314 7942349 133213..133926 1 NC_012730.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 133926 recO 7942349 recO Rickettsia peacockii str. Rustic DNA repair protein RecO YP_002916166.1 133213 D 562019 CDS YP_002916167.1 238650315 7942350 134478..135170 1 NC_012730.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; glycoprotease family protein 135170 7942350 RPR_00770 Rickettsia peacockii str. Rustic glycoprotease family protein YP_002916167.1 134478 D 562019 CDS YP_002916168.1 238650316 7942351 complement(135227..136489) 1 NC_012730.1 hypothetical protein 136489 7942351 RPR_00775 Rickettsia peacockii str. Rustic hypothetical protein YP_002916168.1 135227 R 562019 CDS YP_002916169.1 238650317 7942352 complement(136860..139355) 1 NC_012730.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 139355 infB 7942352 infB Rickettsia peacockii str. Rustic translation initiation factor IF-2 YP_002916169.1 136860 R 562019 CDS YP_002916170.1 238650318 7942353 complement(139586..141097) 1 NC_012730.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 141097 nusA 7942353 nusA Rickettsia peacockii str. Rustic transcription elongation factor NusA YP_002916170.1 139586 R 562019 CDS YP_002916171.1 238650319 7942354 complement(141176..142270) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 142270 7942354 RPR_00790 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916171.1 141176 R 562019 CDS YP_002916172.1 238650320 7942355 complement(142512..143930) 1 NC_012730.1 F pilus assembly protein TraB 143930 7942355 RPR_00800 Rickettsia peacockii str. Rustic F pilus assembly protein TraB YP_002916172.1 142512 R 562019 CDS YP_002916173.1 238650321 7942356 complement(143956..144288) 1 NC_012730.1 hypothetical protein 144288 7942356 RPR_00805 Rickettsia peacockii str. Rustic hypothetical protein YP_002916173.1 143956 R 562019 CDS YP_002916174.1 238650322 7942357 complement(144248..144703) 1 NC_012730.1 hypothetical protein 144703 7942357 RPR_00810 Rickettsia peacockii str. Rustic hypothetical protein YP_002916174.1 144248 R 562019 CDS YP_002916175.1 238650323 7942358 complement(144707..145258) 1 NC_012730.1 conjugative transfer protein TraE 145258 7942358 RPR_00815 Rickettsia peacockii str. Rustic conjugative transfer protein TraE YP_002916175.1 144707 R 562019 CDS YP_002916176.1 238650324 7942359 complement(145258..145566) 1 NC_012730.1 hypothetical protein 145566 7942359 RPR_00820 Rickettsia peacockii str. Rustic hypothetical protein YP_002916176.1 145258 R 562019 CDS YP_002916177.1 238650325 7942360 complement(145974..147758) 1 NC_012730.1 leucine-rich repeat-containing protein 147758 7942360 RPR_00830 Rickettsia peacockii str. Rustic leucine-rich repeat-containing protein YP_002916177.1 145974 R 562019 CDS YP_002916178.1 238650326 7942362 complement(152605..152871) 1 NC_012730.1 hypothetical protein 152871 7942362 RPR_00900 Rickettsia peacockii str. Rustic hypothetical protein YP_002916178.1 152605 R 562019 CDS YP_002916179.1 238650327 7942363 complement(152911..153387) 1 NC_012730.1 ankyrin repeat-containing protein 153387 7942363 RPR_00905 Rickettsia peacockii str. Rustic ankyrin repeat-containing protein YP_002916179.1 152911 R 562019 CDS YP_002916180.1 238650328 7942365 153687..154706 1 NC_012730.1 COG0042 tRNA-dihydrouridine synthase; nifR3-like protein 154706 7942365 RPR_00910 Rickettsia peacockii str. Rustic nifR3-like protein YP_002916180.1 153687 D 562019 CDS YP_002916181.1 238650329 7942366 154724..155413 1 NC_012730.1 hypothetical protein 155413 7942366 RPR_00915 Rickettsia peacockii str. Rustic hypothetical protein YP_002916181.1 154724 D 562019 CDS YP_002916182.1 238650330 7942367 complement(156571..157026) 1 NC_012730.1 ATPase YjeE, predicted to have essential role in cell wall biosynthesis; ATPase YjeE, truncated 157026 7942367 RPR_00930 Rickettsia peacockii str. Rustic ATPase YjeE, truncated YP_002916182.1 156571 R 562019 CDS YP_002916183.1 238650331 7942368 complement(157014..157967) 1 NC_012730.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; zinc/manganese ABC transporter substrate binding protein 157967 7942368 RPR_00935 Rickettsia peacockii str. Rustic zinc/manganese ABC transporter substrate binding protein YP_002916183.1 157014 R 562019 CDS YP_002916184.1 238650332 7942369 complement(158047..159273) 1 NC_012730.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; poly(A) polymerase 159273 7942369 RPR_00940 Rickettsia peacockii str. Rustic poly(A) polymerase YP_002916184.1 158047 R 562019 CDS YP_002916185.1 238650333 7942370 complement(160072..160809) 1 NC_012730.1 COG0658 Predicted membrane metal-binding protein; DNA translocation competence protein 160809 7942370 RPR_00950 Rickettsia peacockii str. Rustic DNA translocation competence protein YP_002916185.1 160072 R 562019 CDS YP_002916186.1 238650334 7942371 complement(161183..162277) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 162277 7942371 RPR_00960 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916186.1 161183 R 562019 CDS YP_002916187.1 238650335 7942372 complement(162330..163091) 1 NC_012730.1 COG1189 Predicted rRNA methylase; hemolysin 163091 7942372 RPR_00965 Rickettsia peacockii str. Rustic hemolysin YP_002916187.1 162330 R 562019 CDS YP_002916188.1 238650336 7942373 complement(163250..164485) 1 NC_012730.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 164485 7942373 RPR_00970 Rickettsia peacockii str. Rustic tyrosyl-tRNA synthetase YP_002916188.1 163250 R 562019 CDS YP_002916189.1 238650337 7942376 complement(171283..171777) 1 NC_012730.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 171777 7942376 RPR_01045 Rickettsia peacockii str. Rustic F0F1 ATP synthase subunit B YP_002916189.1 171283 R 562019 CDS YP_002916190.1 238650338 7942377 complement(171777..172250) 1 NC_012730.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; F0F1 ATP synthase subunit B' 172250 7942377 RPR_01050 Rickettsia peacockii str. Rustic F0F1 ATP synthase subunit B' YP_002916190.1 171777 R 562019 CDS YP_002916191.1 238650339 7942378 complement(172269..172493) 1 NC_012730.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 172493 7942378 RPR_01055 Rickettsia peacockii str. Rustic F0F1 ATP synthase subunit C YP_002916191.1 172269 R 562019 CDS YP_002916192.1 238650340 7942379 complement(172689..173417) 1 NC_012730.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 173417 7942379 RPR_01060 Rickettsia peacockii str. Rustic F0F1 ATP synthase subunit A YP_002916192.1 172689 R 562019 CDS YP_002916193.1 238650341 7942380 complement(173422..173685) 1 NC_012730.1 COG5336 Uncharacterized protein conserved in bacteria; hypothetical protein 173685 7942380 RPR_01065 Rickettsia peacockii str. Rustic hypothetical protein YP_002916193.1 173422 R 562019 CDS YP_002916194.1 238650342 7942381 complement(173796..174629) 1 NC_012730.1 COG1651 Protein-disulfide isomerase; Periplasmic thiol:disulfide interchange protein DsbA 174629 7942381 RPR_01070 Rickettsia peacockii str. Rustic Periplasmic thiol:disulfide interchange protein DsbA YP_002916194.1 173796 R 562019 CDS YP_002916195.1 238650343 7942382 174793..175314 1 NC_012730.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD; carD-like transcriptional regulator 175314 7942382 RPR_01075 Rickettsia peacockii str. Rustic carD-like transcriptional regulator YP_002916195.1 174793 D 562019 CDS YP_002916196.1 238650344 7942383 complement(175561..177165) 1 NC_012730.1 COG0500 SAM-dependent methyltransferases; hypothetical protein 177165 7942383 RPR_01080 Rickettsia peacockii str. Rustic hypothetical protein YP_002916196.1 175561 R 562019 CDS YP_002916197.1 238650345 7942384 complement(177598..178680) 1 NC_012730.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 178680 recF 7942384 recF Rickettsia peacockii str. Rustic recombination protein F YP_002916197.1 177598 R 562019 CDS YP_002916198.1 238650346 7942385 complement(179513..180607) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 180607 7942385 RPR_01100 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916198.1 179513 R 562019 CDS YP_002916199.1 238650347 7942386 complement(182576..183247) 1 NC_012730.1 hypothetical protein 183247 7942386 RPR_01120 Rickettsia peacockii str. Rustic hypothetical protein YP_002916199.1 182576 R 562019 CDS YP_002916200.1 238650348 7942387 complement(186760..187329) 1 NC_012730.1 COG1678 Putative transcriptional regulator; hypothetical protein 187329 7942387 RPR_01165 Rickettsia peacockii str. Rustic hypothetical protein YP_002916200.1 186760 R 562019 CDS YP_002916201.1 238650349 7942388 187395..188063 1 NC_012730.1 COG1286 Uncharacterized membrane protein, required for colicin V production; hypothetical protein 188063 7942388 RPR_01170 Rickettsia peacockii str. Rustic hypothetical protein YP_002916201.1 187395 D 562019 CDS YP_002916202.1 238650350 7942389 188949..190010 1 NC_012730.1 hypothetical protein 190010 7942389 RPR_01180 Rickettsia peacockii str. Rustic hypothetical protein YP_002916202.1 188949 D 562019 CDS YP_002916203.1 238650351 7942390 complement(190061..190744) 1 NC_012730.1 COG0293 23S rRNA methylase; cell division protein ftsJ 190744 7942390 RPR_01185 Rickettsia peacockii str. Rustic cell division protein ftsJ YP_002916203.1 190061 R 562019 CDS YP_002916204.1 238650352 7942391 complement(190879..191349) 1 NC_012730.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 191349 nusB 7942391 nusB Rickettsia peacockii str. Rustic transcription antitermination protein NusB YP_002916204.1 190879 R 562019 CDS YP_002916205.1 238650353 7942392 191631..192704 1 NC_012730.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1; M50 family membrane endopeptidase 192704 7942392 RPR_01195 Rickettsia peacockii str. Rustic M50 family membrane endopeptidase YP_002916205.1 191631 D 562019 CDS YP_002916206.1 238650354 7942393 192945..195251 1 NC_012730.1 COG4775 Outer membrane protein/protective antigen OMA87; outer membrane protein assembly factor 195251 7942393 RPR_01200 Rickettsia peacockii str. Rustic outer membrane protein assembly factor YP_002916206.1 192945 D 562019 CDS YP_002916207.1 238650355 7942395 195949..196539 1 NC_012730.1 hypothetical protein 196539 7942395 RPR_01205 Rickettsia peacockii str. Rustic hypothetical protein YP_002916207.1 195949 D 562019 CDS YP_002916208.1 238650356 7942396 197595..199154 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; multidrug resistance protein B 199154 7942396 RPR_01225 Rickettsia peacockii str. Rustic multidrug resistance protein B YP_002916208.1 197595 D 562019 CDS YP_002916209.1 238650357 7942397 199138..199461 1 NC_012730.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit E 199461 7942397 RPR_01230 Rickettsia peacockii str. Rustic putative monovalent cation/H+ antiporter subunit E YP_002916209.1 199138 D 562019 CDS YP_002916210.1 238650358 7942398 199470..200198 1 NC_012730.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 200198 pyrH 7942398 pyrH Rickettsia peacockii str. Rustic uridylate kinase YP_002916210.1 199470 D 562019 CDS YP_002916211.1 238650359 7942399 200486..201046 1 NC_012730.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 201046 frr 7942399 frr Rickettsia peacockii str. Rustic ribosome recycling factor YP_002916211.1 200486 D 562019 CDS YP_002916212.1 238650360 7942400 201828..202130 1 NC_012730.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 202130 gatC 7942400 gatC Rickettsia peacockii str. Rustic aspartyl/glutamyl-tRNA amidotransferase subunit C YP_002916212.1 201828 D 562019 CDS YP_002916213.1 238650361 7942401 202133..203614 1 NC_012730.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 203614 gatA 7942401 gatA Rickettsia peacockii str. Rustic aspartyl/glutamyl-tRNA amidotransferase subunit A YP_002916213.1 202133 D 562019 CDS YP_002916214.1 238650362 7942402 203617..205068 1 NC_012730.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 205068 gatB 7942402 gatB Rickettsia peacockii str. Rustic aspartyl/glutamyl-tRNA amidotransferase subunit B YP_002916214.1 203617 D 562019 CDS YP_002916215.1 238650363 7942403 205325..206050 1 NC_012730.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamine-binding protein 206050 7942403 RPR_01265 Rickettsia peacockii str. Rustic glutamine-binding protein YP_002916215.1 205325 D 562019 CDS YP_002916216.1 238650364 7942404 206035..206514 1 NC_012730.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family; flavoprotein oxygenase DIM6/NTAB family protein 206514 7942404 RPR_01270 Rickettsia peacockii str. Rustic flavoprotein oxygenase DIM6/NTAB family protein YP_002916216.1 206035 D 562019 CDS YP_002916217.1 238650365 7942405 206795..207514 1 NC_012730.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 207514 7942405 RPR_01275 Rickettsia peacockii str. Rustic dihydrodipicolinate reductase YP_002916217.1 206795 D 562019 CDS YP_002916218.1 238650366 7942406 207600..208310 1 NC_012730.1 COG0670 Integral membrane protein, interacts with FtsH; stabilizing membrane protein 208310 7942406 RPR_01280 Rickettsia peacockii str. Rustic stabilizing membrane protein YP_002916218.1 207600 D 562019 CDS YP_002916219.1 238650367 7942407 208694..210808 1 NC_012730.1 hypothetical protein 210808 7942407 RPR_01285 Rickettsia peacockii str. Rustic hypothetical protein YP_002916219.1 208694 D 562019 CDS YP_002916220.1 238650368 7942408 210966..212060 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 212060 7942408 RPR_01290 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916220.1 210966 D 562019 CDS YP_002916221.1 238650369 7942409 complement(214174..219141) 1 NC_012730.1 COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain; outer membrane protein B (cell surface antigen sca5) 219141 7942409 RPR_01315 Rickettsia peacockii str. Rustic outer membrane protein B (cell surface antigen sca5) YP_002916221.1 214174 R 562019 CDS YP_002916222.1 238650370 7942410 complement(219535..220140) 1 NC_012730.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein 220140 7942410 RPR_01320 Rickettsia peacockii str. Rustic guanosine polyphosphate pyrophosphohydrolase/synthetase-like protein YP_002916222.1 219535 R 562019 CDS YP_002916223.1 238650371 7942411 complement(220505..221449) 1 NC_012730.1 COG1472 Beta-glucosidase-related glycosidases; putative beta-glucosidase 221449 7942411 RPR_01325 Rickettsia peacockii str. Rustic putative beta-glucosidase YP_002916223.1 220505 R 562019 CDS YP_002916224.1 238650372 7942082 complement(221998..222285) 1 NC_012730.1 COG0776 Bacterial nucleoid DNA-binding protein; integration host factor alpha-subunit 222285 himA 7942082 himA Rickettsia peacockii str. Rustic integration host factor alpha-subunit YP_002916224.1 221998 R 562019 CDS YP_002916225.1 238650373 7942493 223379..223849 1 NC_012730.1 COG1225 Peroxiredoxin; thioredoxin peroxidase 223849 7942493 RPR_01345 Rickettsia peacockii str. Rustic thioredoxin peroxidase YP_002916225.1 223379 D 562019 CDS YP_002916226.1 238650374 7942494 complement(223969..224841) 1 NC_012730.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 224841 7942494 RPR_01350 Rickettsia peacockii str. Rustic lipid A biosynthesis lauroyl acyltransferase YP_002916226.1 223969 R 562019 CDS YP_002916227.1 238650375 7942495 complement(224816..225781) 1 NC_012730.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 225781 lpxK 7942495 lpxK Rickettsia peacockii str. Rustic tetraacyldisaccharide 4'-kinase YP_002916227.1 224816 R 562019 CDS YP_002916228.1 238650376 7942496 complement(225785..226639) 1 NC_012730.1 COG0739 Membrane proteins related to metalloendopeptidases; putative periplasmic protein 226639 7942496 RPR_01360 Rickettsia peacockii str. Rustic putative periplasmic protein YP_002916228.1 225785 R 562019 CDS YP_002916229.1 238650377 7942497 complement(226639..227361) 1 NC_012730.1 COG2961 Protein involved in catabolism of external DNA; protein involved in external DNA uptake 227361 7942497 RPR_01365 Rickettsia peacockii str. Rustic protein involved in external DNA uptake YP_002916229.1 226639 R 562019 CDS YP_002916230.1 238650378 7942498 complement(228071..230140) 1 NC_012730.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 230140 ligA 7942498 ligA Rickettsia peacockii str. Rustic NAD-dependent DNA ligase LigA YP_002916230.1 228071 R 562019 CDS YP_002916231.1 238650379 7942499 complement(230426..231511) 1 NC_012730.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 231511 tgt 7942499 tgt Rickettsia peacockii str. Rustic queuine tRNA-ribosyltransferase YP_002916231.1 230426 R 562019 CDS YP_002916232.1 238650380 7942500 234436..235023 1 NC_012730.1 hypothetical protein 235023 7942500 RPR_01425 Rickettsia peacockii str. Rustic hypothetical protein YP_002916232.1 234436 D 562019 CDS YP_002916233.1 238650381 7942501 complement(235202..235654) 1 NC_012730.1 hypothetical protein 235654 7942501 RPR_01430 Rickettsia peacockii str. Rustic hypothetical protein YP_002916233.1 235202 R 562019 CDS YP_002916234.1 238650382 7942502 complement(236111..236560) 1 NC_012730.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; toluene transport system protein 236560 7942502 RPR_01445 Rickettsia peacockii str. Rustic toluene transport system protein YP_002916234.1 236111 R 562019 CDS YP_002916235.1 238650383 7942503 complement(236585..236884) 1 NC_012730.1 COG3761 NADH:ubiquinone oxidoreductase 17.2 kDa subunit; hypothetical protein 236884 7942503 RPR_01450 Rickettsia peacockii str. Rustic hypothetical protein YP_002916235.1 236585 R 562019 CDS YP_002916236.1 238650384 7942504 complement(236872..237339) 1 NC_012730.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 237339 rnhA 7942504 rnhA Rickettsia peacockii str. Rustic ribonuclease H YP_002916236.1 236872 R 562019 CDS YP_002916237.1 238650385 7942505 complement(237339..237812) 1 NC_012730.1 COG3814 Uncharacterized protein conserved in bacteria; hypothetical protein 237812 7942505 RPR_01460 Rickettsia peacockii str. Rustic hypothetical protein YP_002916237.1 237339 R 562019 CDS YP_002916238.1 238650386 7942506 238591..239403 1 NC_012730.1 COG3494 Uncharacterized protein conserved in bacteria; hypothetical protein 239403 7942506 RPR_01465 Rickettsia peacockii str. Rustic hypothetical protein YP_002916238.1 238591 D 562019 CDS YP_002916239.1 238650387 7942507 239397..239972 1 NC_012730.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 239972 coaE 7942507 coaE Rickettsia peacockii str. Rustic dephospho-CoA kinase YP_002916239.1 239397 D 562019 CDS YP_002916240.1 238650388 7942508 239960..240649 1 NC_012730.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 240649 7942508 RPR_01475 Rickettsia peacockii str. Rustic DNA polymerase III subunit epsilon YP_002916240.1 239960 D 562019 CDS YP_002916241.1 238650389 7942509 240776..241498 1 NC_012730.1 COG3346 Uncharacterized conserved protein; surfeit locus protein 1 241498 7942509 RPR_01480 Rickettsia peacockii str. Rustic surfeit locus protein 1 YP_002916241.1 240776 D 562019 CDS YP_002916242.1 238650390 7942510 241554..244022 1 NC_012730.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); ATP-dependent helicase 244022 7942510 RPR_01485 Rickettsia peacockii str. Rustic ATP-dependent helicase YP_002916242.1 241554 D 562019 CDS YP_002916243.1 238650391 7942511 complement(244528..245070) 1 NC_012730.1 hypothetical protein 245070 7942511 RPR_01490 Rickettsia peacockii str. Rustic hypothetical protein YP_002916243.1 244528 R 562019 CDS YP_002916244.1 238650392 7942512 245279..246223 1 NC_012730.1 COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl CoA-ACP transacylase 246223 7942512 RPR_01495 Rickettsia peacockii str. Rustic malonyl CoA-ACP transacylase YP_002916244.1 245279 D 562019 CDS YP_002916245.1 238650393 7942513 complement(246294..247388) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 247388 7942513 RPR_01500 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916245.1 246294 R 562019 CDS YP_002916246.1 238650394 7942515 253944..255038 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 255038 7942515 RPR_01580 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916246.1 253944 D 562019 CDS YP_002916247.1 238650395 7942516 complement(255648..256700) 1 NC_012730.1 COG1566 Multidrug resistance efflux pump; multidrug resistance protein A 256700 7942516 RPR_01590 Rickettsia peacockii str. Rustic multidrug resistance protein A YP_002916247.1 255648 R 562019 CDS YP_002916248.1 238650396 7942517 complement(256709..257473) 1 NC_012730.1 COG1183 Phosphatidylserine synthase; CDP-diacylglycerol--serine O-phosphatidyltransferase 257473 7942517 RPR_01595 Rickettsia peacockii str. Rustic CDP-diacylglycerol--serine O-phosphatidyltransferase YP_002916248.1 256709 R 562019 CDS YP_002916249.1 238650397 7942518 complement(257735..258430) 1 NC_012730.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 258430 7942518 RPR_01600 Rickettsia peacockii str. Rustic phosphatidylserine decarboxylase YP_002916249.1 257735 R 562019 CDS YP_002916250.1 238650398 7942519 complement(258464..258787) 1 NC_012730.1 hypothetical protein 258787 7942519 RPR_01605 Rickettsia peacockii str. Rustic hypothetical protein YP_002916250.1 258464 R 562019 CDS YP_002916251.1 238650399 7942520 complement(258859..259605) 1 NC_012730.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family; extragenic suppressor protein suhB 259605 7942520 RPR_01610 Rickettsia peacockii str. Rustic extragenic suppressor protein suhB YP_002916251.1 258859 R 562019 CDS YP_002916252.1 238650400 7942521 complement(259833..260399) 1 NC_012730.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 260399 7942521 RPR_01615 Rickettsia peacockii str. Rustic elongation factor P YP_002916252.1 259833 R 562019 CDS YP_002916253.1 238650401 7942522 260475..261827 1 NC_012730.1 involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; response regulator PleD 261827 pleD 7942522 pleD Rickettsia peacockii str. Rustic response regulator PleD YP_002916253.1 260475 D 562019 CDS YP_002916254.1 238650402 7942523 261852..262337 1 NC_012730.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 262337 7942523 RPR_01625 Rickettsia peacockii str. Rustic dinucleoside polyphosphate hydrolase YP_002916254.1 261852 D 562019 CDS YP_002916255.1 238650403 7942524 complement(263186..263515) 1 NC_012730.1 COG2154 Pterin-4a-carbinolamine dehydratase; putative pterin-4-alpha-carbinolamine dehydratase (PHS) 263515 7942524 RPR_01640 Rickettsia peacockii str. Rustic putative pterin-4-alpha-carbinolamine dehydratase (PHS) YP_002916255.1 263186 R 562019 CDS YP_002916256.1 238650404 7942526 complement(265002..265481) 1 NC_012730.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 265481 rpsI 7942526 rpsI Rickettsia peacockii str. Rustic 30S ribosomal protein S9 YP_002916256.1 265002 R 562019 CDS YP_002916257.1 238650405 7942527 complement(265488..265955) 1 NC_012730.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 265955 rplM 7942527 rplM Rickettsia peacockii str. Rustic 50S ribosomal protein L13 YP_002916257.1 265488 R 562019 CDS YP_002916258.1 238650406 7942528 complement(266048..267292) 1 NC_012730.1 COG1520 FOG: WD40-like repeat; PQQ repeat-containing protein 267292 7942528 RPR_01665 Rickettsia peacockii str. Rustic PQQ repeat-containing protein YP_002916258.1 266048 R 562019 CDS YP_002916259.1 238650407 7942529 complement(267315..267977) 1 NC_012730.1 hypothetical protein 267977 7942529 RPR_01670 Rickettsia peacockii str. Rustic hypothetical protein YP_002916259.1 267315 R 562019 CDS YP_002916260.1 238650408 7942530 complement(267990..268727) 1 NC_012730.1 COG1729 Uncharacterized protein conserved in bacteria; Tol system periplasmic component 268727 7942530 RPR_01675 Rickettsia peacockii str. Rustic Tol system periplasmic component YP_002916260.1 267990 R 562019 CDS YP_002916261.1 238650409 7942531 complement(268793..270286) 1 NC_012730.1 COG0642 Signal transduction histidine kinase; sensory transduction protein kinase 270286 7942531 RPR_01680 Rickettsia peacockii str. Rustic sensory transduction protein kinase YP_002916261.1 268793 R 562019 CDS YP_002916262.1 238650410 7942532 complement(270501..271871) 1 NC_012730.1 COG0793 Periplasmic protease; tail-specific protease precursor 271871 7942532 RPR_01685 Rickettsia peacockii str. Rustic tail-specific protease precursor YP_002916262.1 270501 R 562019 CDS YP_002916263.1 238650411 7942533 complement(272000..273988) 1 NC_012730.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 273988 7942533 RPR_01690 Rickettsia peacockii str. Rustic DNA topoisomerase IV subunit B YP_002916263.1 272000 R 562019 CDS YP_002916264.1 238650412 7942534 complement(274198..275919) 1 NC_012730.1 COG0666 FOG: Ankyrin repeat; hypothetical protein 275919 7942534 RPR_01695 Rickettsia peacockii str. Rustic hypothetical protein YP_002916264.1 274198 R 562019 CDS YP_002916265.1 238650413 7942535 complement(275968..276117) 1 NC_012730.1 hypothetical protein 276117 7942535 RPR_01700 Rickettsia peacockii str. Rustic hypothetical protein YP_002916265.1 275968 R 562019 CDS YP_002916266.1 238650414 7942536 complement(276126..276524) 1 NC_012730.1 COG3827 Uncharacterized protein conserved in bacteria; hypothetical protein 276524 7942536 RPR_01705 Rickettsia peacockii str. Rustic hypothetical protein YP_002916266.1 276126 R 562019 CDS YP_002916267.1 238650415 7942537 complement(276526..277902) 1 NC_012730.1 COG1538 Outer membrane protein; type I secretion outer membrane protein, TolC precursor 277902 7942537 RPR_01710 Rickettsia peacockii str. Rustic type I secretion outer membrane protein, TolC precursor YP_002916267.1 276526 R 562019 CDS YP_002916268.1 238650416 7942538 278232..278447 1 NC_012730.1 hypothetical protein 278447 7942538 RPR_01715 Rickettsia peacockii str. Rustic hypothetical protein YP_002916268.1 278232 D 562019 CDS YP_002916269.1 238650417 7942539 278652..279116 1 NC_012730.1 hypothetical protein 279116 7942539 RPR_01725 Rickettsia peacockii str. Rustic hypothetical protein YP_002916269.1 278652 D 562019 CDS YP_002916270.1 238650418 7942540 279313..279729 1 NC_012730.1 hypothetical protein 279729 7942540 RPR_01735 Rickettsia peacockii str. Rustic hypothetical protein YP_002916270.1 279313 D 562019 CDS YP_002916271.1 238650419 7942541 complement(282774..282998) 1 NC_012730.1 hypothetical protein 282998 7942541 RPR_01775 Rickettsia peacockii str. Rustic hypothetical protein YP_002916271.1 282774 R 562019 CDS YP_002916272.1 238650420 7942542 complement(283086..284993) 1 NC_012730.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 284993 thrS 7942542 thrS Rickettsia peacockii str. Rustic threonyl-tRNA synthetase YP_002916272.1 283086 R 562019 CDS YP_002916273.1 238650421 7942543 complement(285109..286677) 1 NC_012730.1 hypothetical protein 286677 7942543 RPR_01785 Rickettsia peacockii str. Rustic hypothetical protein YP_002916273.1 285109 R 562019 CDS YP_002916274.1 238650422 7942544 complement(286897..287607) 1 NC_012730.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 287607 7942544 RPR_01790 Rickettsia peacockii str. Rustic phosphoribosylaminoimidazole-succinocarboxamide synthase YP_002916274.1 286897 R 562019 CDS YP_002916275.1 238650423 7942545 complement(287761..288999) 1 NC_012730.1 COG0612 Predicted Zn-dependent peptidases; similar to mitochondrial protease; protease 288999 7942545 RPR_01795 Rickettsia peacockii str. Rustic protease YP_002916275.1 287761 R 562019 CDS YP_002916276.1 238650424 7942546 complement(289076..289924) 1 NC_012730.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; beta 1,4 glucosyltransferase 289924 7942546 RPR_01800 Rickettsia peacockii str. Rustic beta 1,4 glucosyltransferase YP_002916276.1 289076 R 562019 CDS YP_002916277.1 238650425 7942547 complement(289917..290174) 1 NC_012730.1 COG4115 Uncharacterized protein conserved in bacteria; Putative toxin of toxin-antitoxin (TA) system 290174 7942547 RPR_01805 Rickettsia peacockii str. Rustic Putative toxin of toxin-antitoxin (TA) system YP_002916277.1 289917 R 562019 CDS YP_002916278.1 238650426 7942548 complement(290185..290427) 1 NC_012730.1 COG2161 Antitoxin of toxin-antitoxin stability system; RelB 290427 7942548 RPR_01810 Rickettsia peacockii str. Rustic RelB YP_002916278.1 290185 R 562019 CDS YP_002916279.1 238650427 7942549 complement(290629..291648) 1 NC_012730.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2; cytochrome d ubiquinol oxidase subunit II 291648 7942549 RPR_01815 Rickettsia peacockii str. Rustic cytochrome d ubiquinol oxidase subunit II YP_002916279.1 290629 R 562019 CDS YP_002916280.1 238650428 7942550 complement(291656..293026) 1 NC_012730.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1; cyanide-insensitive cytochrome bd-type quinol oxidase subunit I 293026 7942550 RPR_01820 Rickettsia peacockii str. Rustic cyanide-insensitive cytochrome bd-type quinol oxidase subunit I YP_002916280.1 291656 R 562019 CDS YP_002916281.1 238650429 7942551 complement(293181..293453) 1 NC_012730.1 hypothetical protein 293453 7942551 RPR_01825 Rickettsia peacockii str. Rustic hypothetical protein YP_002916281.1 293181 R 562019 CDS YP_002916282.1 238650430 7942552 293634..295403 1 NC_012730.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; multidrug resistance ABC transporter ATP-binding and permease protein 295403 7942552 RPR_01830 Rickettsia peacockii str. Rustic multidrug resistance ABC transporter ATP-binding and permease protein YP_002916282.1 293634 D 562019 CDS YP_002916283.1 238650431 7942553 296827..297924 1 NC_012730.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine:tRNA ribosyltransferase-isomerase 297924 7942553 RPR_01855 Rickettsia peacockii str. Rustic S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_002916283.1 296827 D 562019 CDS YP_002916284.1 238650432 7942554 complement(299386..300480) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 300480 7942554 RPR_01870 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916284.1 299386 R 562019 CDS YP_002916285.1 238650433 7942555 complement(300540..301106) 1 NC_012730.1 COG4421 Capsular polysaccharide biosynthesis protein; hypothetical protein 301106 7942555 RPR_01875 Rickettsia peacockii str. Rustic hypothetical protein YP_002916285.1 300540 R 562019 CDS YP_002916286.1 238650434 7942156 complement(304918..305334) 1 NC_012730.1 COG0147 Anthranilate/para-aminobenzoate synthases component I; hypothetical protein 305334 7942156 RPR_01880 Rickettsia peacockii str. Rustic hypothetical protein YP_002916286.1 304918 R 562019 CDS YP_002916287.1 238650435 7942558 complement(305551..306462) 1 NC_012730.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 306462 fmt 7942558 fmt Rickettsia peacockii str. Rustic methionyl-tRNA formyltransferase YP_002916287.1 305551 R 562019 CDS YP_002916288.1 238650436 7942559 complement(306459..306986) 1 NC_012730.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 306986 def 7942559 def Rickettsia peacockii str. Rustic peptide deformylase YP_002916288.1 306459 R 562019 CDS YP_002916289.1 238650437 7942560 complement(307435..307620) 1 NC_012730.1 hypothetical protein 307620 7942560 RPR_01900 Rickettsia peacockii str. Rustic hypothetical protein YP_002916289.1 307435 R 562019 CDS YP_002916290.1 238650438 7942561 complement(309641..312358) 1 NC_012730.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 312358 7942561 RPR_01920 Rickettsia peacockii str. Rustic DNA gyrase subunit A YP_002916290.1 309641 R 562019 CDS YP_002916291.1 238650439 7942562 complement(312726..312896) 1 NC_012730.1 hypothetical protein 312896 7942562 RPR_01925 Rickettsia peacockii str. Rustic hypothetical protein YP_002916291.1 312726 R 562019 CDS YP_002916292.1 238650440 7942563 complement(315330..315638) 1 NC_012730.1 COG0695 Glutaredoxin and related proteins; glutaredoxin 3 315638 7942563 RPR_01945 Rickettsia peacockii str. Rustic glutaredoxin 3 YP_002916292.1 315330 R 562019 CDS YP_002916293.1 238650441 7942564 315709..317694 1 NC_012730.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 317694 7942564 RPR_01950 Rickettsia peacockii str. Rustic excinuclease ABC subunit B YP_002916293.1 315709 D 562019 CDS YP_002916294.1 238650442 7942565 complement(317848..318414) 1 NC_012730.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 318414 rnhB 7942565 rnhB Rickettsia peacockii str. Rustic ribonuclease HII YP_002916294.1 317848 R 562019 CDS YP_002916295.1 238650443 7942566 318498..318998 1 NC_012730.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 318998 hscB 7942566 hscB Rickettsia peacockii str. Rustic co-chaperone HscB YP_002916295.1 318498 D 562019 CDS YP_002916296.1 238650444 7942567 318989..320776 1 NC_012730.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 320776 hscA 7942567 hscA Rickettsia peacockii str. Rustic chaperone protein HscA YP_002916296.1 318989 D 562019 CDS YP_002916297.1 238650445 7942568 320840..321178 1 NC_012730.1 COG0633 Ferredoxin; ferredoxin 321178 7942568 RPR_01970 Rickettsia peacockii str. Rustic ferredoxin YP_002916297.1 320840 D 562019 CDS YP_002916298.1 238650446 7942569 321191..322261 1 NC_012730.1 hypothetical protein 322261 7942569 RPR_01975 Rickettsia peacockii str. Rustic hypothetical protein YP_002916298.1 321191 D 562019 CDS YP_002916299.1 238650447 7942570 322266..323207 1 NC_012730.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component; immunogenic protein 323207 7942570 RPR_01980 Rickettsia peacockii str. Rustic immunogenic protein YP_002916299.1 322266 D 562019 CDS YP_002916300.1 238650448 7942571 323217..323663 1 NC_012730.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins; hypothetical protein 323663 7942571 RPR_01985 Rickettsia peacockii str. Rustic hypothetical protein YP_002916300.1 323217 D 562019 CDS YP_002916301.1 238650449 7942572 complement(326018..326842) 1 NC_012730.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 326842 dapD 7942572 dapD Rickettsia peacockii str. Rustic 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_002916301.1 326018 R 562019 CDS YP_002916302.1 238650450 7942573 326918..327550 1 NC_012730.1 hypothetical protein 327550 7942573 RPR_02010 Rickettsia peacockii str. Rustic hypothetical protein YP_002916302.1 326918 D 562019 CDS YP_002916303.1 238650451 7942656 complement(327894..328253) 1 NC_012730.1 COG3838 Type IV secretory pathway, VirB2 components (pilins); virB2 protein 328253 7942656 RPR_02015 Rickettsia peacockii str. Rustic virB2 protein YP_002916303.1 327894 R 562019 CDS YP_002916304.1 238650452 7942657 complement(328409..329260) 1 NC_012730.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3; cytochrome c oxidase subunit III 329260 7942657 RPR_02020 Rickettsia peacockii str. Rustic cytochrome c oxidase subunit III YP_002916304.1 328409 R 562019 CDS YP_002916305.1 238650453 7942658 complement(329801..330340) 1 NC_012730.1 COG2941 Ubiquinone biosynthesis protein COQ7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 330340 7942658 RPR_02025 Rickettsia peacockii str. Rustic 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_002916305.1 329801 R 562019 CDS YP_002916306.1 238650454 7942659 complement(330476..331450) 1 NC_012730.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 331450 holA 7942659 holA Rickettsia peacockii str. Rustic DNA polymerase III subunit delta YP_002916306.1 330476 R 562019 CDS YP_002916307.1 238650455 7942660 complement(331458..331931) 1 NC_012730.1 hypothetical protein 331931 7942660 RPR_02035 Rickettsia peacockii str. Rustic hypothetical protein YP_002916307.1 331458 R 562019 CDS YP_002916308.1 238650456 7942661 complement(333629..335101) 1 NC_012730.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; heat shock protease 335101 7942661 RPR_02050 Rickettsia peacockii str. Rustic heat shock protease YP_002916308.1 333629 R 562019 CDS YP_002916309.1 238650457 7942662 335186..337069 1 NC_012730.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 337069 dnaK 7942662 dnaK Rickettsia peacockii str. Rustic molecular chaperone DnaK YP_002916309.1 335186 D 562019 CDS YP_002916310.1 238650458 7942663 337198..338319 1 NC_012730.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 338319 7942663 RPR_02060 Rickettsia peacockii str. Rustic chaperone protein DnaJ YP_002916310.1 337198 D 562019 CDS YP_002916311.1 238650459 7942664 338861..339616 1 NC_012730.1 COG4105 DNA uptake lipoprotein; ComL family lipoprotein 339616 7942664 RPR_02070 Rickettsia peacockii str. Rustic ComL family lipoprotein YP_002916311.1 338861 D 562019 CDS YP_002916312.1 238650460 7942665 339624..341261 1 NC_012730.1 COG0497 ATPase involved in DNA repair; DNA repair protein RecN 341261 7942665 RPR_02075 Rickettsia peacockii str. Rustic DNA repair protein RecN YP_002916312.1 339624 D 562019 CDS YP_002916313.1 238650461 7942666 341438..342928 1 NC_012730.1 COG2317 Zn-dependent carboxypeptidase; thermostable carboxypeptidase 342928 7942666 RPR_02080 Rickettsia peacockii str. Rustic thermostable carboxypeptidase YP_002916313.1 341438 D 562019 CDS YP_002916314.1 238650462 7942667 343065..345851 1 NC_012730.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 345851 sucA 7942667 sucA Rickettsia peacockii str. Rustic 2-oxoglutarate dehydrogenase E1 component YP_002916314.1 343065 D 562019 CDS YP_002916315.1 238650463 7942668 346016..347203 1 NC_012730.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 347203 7942668 RPR_02090 Rickettsia peacockii str. Rustic dihydrolipoamide succinyltransferase YP_002916315.1 346016 D 562019 CDS YP_002916316.1 238650464 7942669 347373..347789 1 NC_012730.1 COG0720 6-pyruvoyl-tetrahydropterin synthase; hypothetical protein 347789 7942669 RPR_02095 Rickettsia peacockii str. Rustic hypothetical protein YP_002916316.1 347373 D 562019 CDS YP_002916317.1 238650465 7942670 347792..348106 1 NC_012730.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations; periplasmic divalent cation tolerance protein 348106 7942670 RPR_02100 Rickettsia peacockii str. Rustic periplasmic divalent cation tolerance protein YP_002916317.1 347792 D 562019 CDS YP_002916318.1 238650466 7942671 348147..349346 1 NC_012730.1 COG1301 Na+/H+-dicarboxylate symporters; Na+/H+-dicarboxylate symporter 349346 7942671 RPR_02105 Rickettsia peacockii str. Rustic Na+/H+-dicarboxylate symporter YP_002916318.1 348147 D 562019 CDS YP_002916319.1 238650467 7942672 complement(350282..351376) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 351376 7942672 RPR_02120 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916319.1 350282 R 562019 CDS YP_002916320.1 238650468 7942673 complement(351451..351654) 1 NC_012730.1 hypothetical protein 351654 7942673 RPR_02125 Rickettsia peacockii str. Rustic hypothetical protein YP_002916320.1 351451 R 562019 CDS YP_002916321.1 238650469 7942674 complement(351651..351893) 1 NC_012730.1 COG0271 Stress-induced morphogen (activity unknown); hypothetical protein 351893 7942674 RPR_02130 Rickettsia peacockii str. Rustic hypothetical protein YP_002916321.1 351651 R 562019 CDS YP_002916322.1 238650470 7942675 351957..353174 1 NC_012730.1 COG2200 FOG: EAL domain; hypothetical protein 353174 7942675 RPR_02135 Rickettsia peacockii str. Rustic hypothetical protein YP_002916322.1 351957 D 562019 CDS YP_002916323.1 238650471 7942676 353395..354852 1 NC_012730.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 354852 murC 7942676 murC Rickettsia peacockii str. Rustic UDP-N-acetylmuramate--L-alanine ligase YP_002916323.1 353395 D 562019 CDS YP_002916324.1 238650472 7942677 355075..355962 1 NC_012730.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 355962 murB 7942677 murB Rickettsia peacockii str. Rustic UDP-N-acetylenolpyruvoylglucosamine reductase YP_002916324.1 355075 D 562019 CDS YP_002916325.1 238650473 7942678 356206..357177 1 NC_012730.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 357177 ddl 7942678 ddl Rickettsia peacockii str. Rustic D-alanine--D-alanine ligase YP_002916325.1 356206 D 562019 CDS YP_002916326.1 238650474 7942679 357174..357977 1 NC_012730.1 COG1589 Cell division septal protein; cell division protein 357977 7942679 RPR_02155 Rickettsia peacockii str. Rustic cell division protein YP_002916326.1 357174 D 562019 CDS YP_002916327.1 238650475 7942680 358105..359340 1 NC_012730.1 COG0849 Actin-like ATPase involved in cell division; cell division protein ftsA 359340 7942680 RPR_02160 Rickettsia peacockii str. Rustic cell division protein ftsA YP_002916327.1 358105 D 562019 CDS YP_002916328.1 238650476 7942681 complement(359483..359953) 1 NC_012730.1 hypothetical protein 359953 7942681 RPR_02165 Rickettsia peacockii str. Rustic hypothetical protein YP_002916328.1 359483 R 562019 CDS YP_002916329.1 238650477 7942682 complement(359943..360470) 1 NC_012730.1 COG3474 Cytochrome c2; cytochrome c 360470 7942682 RPR_02170 Rickettsia peacockii str. Rustic cytochrome c YP_002916329.1 359943 R 562019 CDS YP_002916330.1 238650478 7942683 360584..361615 1 NC_012730.1 hypothetical protein 361615 7942683 RPR_02175 Rickettsia peacockii str. Rustic hypothetical protein YP_002916330.1 360584 D 562019 CDS YP_002916331.1 238650479 7942684 complement(361662..362537) 1 NC_012730.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 362537 lpxC 7942684 lpxC Rickettsia peacockii str. Rustic UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_002916331.1 361662 R 562019 CDS YP_002916332.1 238650480 7942685 complement(362895..364043) 1 NC_012730.1 hypothetical protein 364043 7942685 RPR_02185 Rickettsia peacockii str. Rustic hypothetical protein YP_002916332.1 362895 R 562019 CDS YP_002916333.1 238650481 7942686 364470..366542 1 NC_012730.1 COG1530 Ribonucleases G and E; ribonuclease E 366542 7942686 RPR_02190 Rickettsia peacockii str. Rustic ribonuclease E YP_002916333.1 364470 D 562019 CDS YP_002916334.1 238650482 7942687 366835..367803 1 NC_012730.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly; cytochrome c oxidase assembly protein 367803 7942687 RPR_02195 Rickettsia peacockii str. Rustic cytochrome c oxidase assembly protein YP_002916334.1 366835 D 562019 CDS YP_002916335.1 238650483 7942688 367816..368727 1 NC_012730.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein 368727 7942688 RPR_02200 Rickettsia peacockii str. Rustic hypothetical protein YP_002916335.1 367816 D 562019 CDS YP_002916336.1 238650484 7942689 368882..370063 1 NC_012730.1 COG1680 Beta-lactamase class C and other penicillin binding proteins; penicillin-binding protein 4* 370063 7942689 RPR_02205 Rickettsia peacockii str. Rustic penicillin-binding protein 4* YP_002916336.1 368882 D 562019 CDS YP_002916337.1 238650485 7942690 370210..371025 1 NC_012730.1 COG0708 Exonuclease III; exodeoxyribonuclease III 371025 7942690 RPR_02210 Rickettsia peacockii str. Rustic exodeoxyribonuclease III YP_002916337.1 370210 D 562019 CDS YP_002916338.1 238650486 7942691 371048..372028 1 NC_012730.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit; pyruvate dehydrogenase e1 component, alpha subunit precursor 372028 7942691 RPR_02215 Rickettsia peacockii str. Rustic pyruvate dehydrogenase e1 component, alpha subunit precursor YP_002916338.1 371048 D 562019 CDS YP_002916339.1 238650487 7942692 372189..373169 1 NC_012730.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acyltransferase within the complex. The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2); it contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 373169 7942692 RPR_02220 Rickettsia peacockii str. Rustic pyruvate dehydrogenase subunit beta YP_002916339.1 372189 D 562019 CDS YP_002916340.1 238650488 7942693 complement(373307..375136) 1 NC_012730.1 COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein 375136 7942693 RPR_02225 Rickettsia peacockii str. Rustic GTP-binding protein YP_002916340.1 373307 R 562019 CDS YP_002916341.1 238650489 7942694 376330..376815 1 NC_012730.1 COG2825 Outer membrane protein; Outer membrane protein H precursor 376815 7942694 RPR_02245 Rickettsia peacockii str. Rustic Outer membrane protein H precursor YP_002916341.1 376330 D 562019 CDS YP_002916342.1 238650490 7942695 376993..378444 1 NC_012730.1 catalyzes the formation of 2-oxoglutarate from isocitrate; isocitrate dehydrogenase 378444 7942695 RPR_02250 Rickettsia peacockii str. Rustic isocitrate dehydrogenase YP_002916342.1 376993 D 562019 CDS YP_002916343.1 238650491 7942696 378559..378879 1 NC_012730.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit G 378879 7942696 RPR_02255 Rickettsia peacockii str. Rustic putative monovalent cation/H+ antiporter subunit G YP_002916343.1 378559 D 562019 CDS YP_002916344.1 238650492 7942697 378943..380016 1 NC_012730.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit B 380016 7942697 RPR_02260 Rickettsia peacockii str. Rustic putative monovalent cation/H+ antiporter subunit B YP_002916344.1 378943 D 562019 CDS YP_002916345.1 238650493 7942698 380009..380656 1 NC_012730.1 heme exporter protein B 380656 7942698 RPR_02265 Rickettsia peacockii str. Rustic heme exporter protein B YP_002916345.1 380009 D 562019 CDS YP_002916346.1 238650494 7942699 380731..381189 1 NC_012730.1 hypothetical protein 381189 7942699 RPR_02270 Rickettsia peacockii str. Rustic hypothetical protein YP_002916346.1 380731 D 562019 CDS YP_002916347.1 238650495 7942700 381211..381744 1 NC_012730.1 COG0723 Rieske Fe-S protein; ubiquinol-cytochrome c reductase iron-sulfur subunit 381744 7942700 RPR_02275 Rickettsia peacockii str. Rustic ubiquinol-cytochrome c reductase iron-sulfur subunit YP_002916347.1 381211 D 562019 CDS YP_002916348.1 238650496 7942701 381751..382947 1 NC_012730.1 COG1290 Cytochrome b subunit of the bc complex; cytochrome b 382947 7942701 RPR_02280 Rickettsia peacockii str. Rustic cytochrome b YP_002916348.1 381751 D 562019 CDS YP_002916349.1 238650497 7942702 383450..384205 1 NC_012730.1 COG2857 Cytochrome c1; cytochrome c1, heme protein precursor 384205 7942702 RPR_02285 Rickettsia peacockii str. Rustic cytochrome c1, heme protein precursor YP_002916349.1 383450 D 562019 CDS YP_002916350.1 238650498 7942703 384994..385497 1 NC_012730.1 COG0071 Molecular chaperone (small heat shock protein); small heat shock protein 385497 7942703 RPR_02300 Rickettsia peacockii str. Rustic small heat shock protein YP_002916350.1 384994 D 562019 CDS YP_002916351.1 238650499 7942704 complement(387398..388255) 1 NC_012730.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 388255 prfB 7942704 prfB Rickettsia peacockii str. Rustic peptide chain release factor 2 YP_002916351.1 387398 R 562019 CDS YP_002916352.1 238650500 7942705 388623..390425 1 NC_012730.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 390425 7942705 RPR_02330 Rickettsia peacockii str. Rustic GTP-binding protein LepA YP_002916352.1 388623 D 562019 CDS YP_002916353.1 238650501 7942707 390727..391821 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 391821 7942707 RPR_02340 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916353.1 390727 D 562019 CDS YP_002916354.1 238650502 7942708 392166..394739 1 NC_012730.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; clpB protein 394739 7942708 RPR_02350 Rickettsia peacockii str. Rustic clpB protein YP_002916354.1 392166 D 562019 CDS YP_002916355.1 238650503 7942709 complement(394980..395471) 1 NC_012730.1 hypothetical protein 395471 7942709 RPR_02355 Rickettsia peacockii str. Rustic hypothetical protein YP_002916355.1 394980 R 562019 CDS YP_002916356.1 238650504 7942710 complement(395598..396632) 1 NC_012730.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 396632 7942710 RPR_02360 Rickettsia peacockii str. Rustic putative DNA-binding/iron metalloprotein/AP endonuclease YP_002916356.1 395598 R 562019 CDS YP_002916357.1 238650505 7942711 complement(396815..398008) 1 NC_012730.1 COG1398 Fatty-acid desaturase; acyl-CoA desaturase 398008 7942711 RPR_02365 Rickettsia peacockii str. Rustic acyl-CoA desaturase YP_002916357.1 396815 R 562019 CDS YP_002916358.1 238650506 7942712 398963..399328 1 NC_012730.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 399328 rpsF 7942712 rpsF Rickettsia peacockii str. Rustic 30S ribosomal protein S6 YP_002916358.1 398963 D 562019 CDS YP_002916359.1 238650507 7942713 399353..399640 1 NC_012730.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 399640 rpsR 7942713 rpsR Rickettsia peacockii str. Rustic 30S ribosomal protein S18 YP_002916359.1 399353 D 562019 CDS YP_002916360.1 238650508 7942714 399652..400167 1 NC_012730.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 400167 rplI 7942714 rplI Rickettsia peacockii str. Rustic 50S ribosomal protein L9 YP_002916360.1 399652 D 562019 CDS YP_002916361.1 238650509 7942715 400470..402071 1 NC_012730.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthetase 402071 7942715 RPR_02390 Rickettsia peacockii str. Rustic tRNA(Ile)-lysidine synthetase YP_002916361.1 400470 D 562019 CDS YP_002916362.1 238650510 7942716 402172..404085 1 NC_012730.1 COG0465 ATP-dependent Zn proteases; cell division protein ftsH 404085 7942716 RPR_02395 Rickettsia peacockii str. Rustic cell division protein ftsH YP_002916362.1 402172 D 562019 CDS YP_002916363.1 238650511 7942798 404903..405688 1 NC_012730.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 405688 sdhB 7942798 sdhB Rickettsia peacockii str. Rustic succinate dehydrogenase iron-sulfur subunit YP_002916363.1 404903 D 562019 CDS YP_002916364.1 238650512 7942800 complement(406262..407482) 1 NC_012730.1 COG1565 Uncharacterized conserved protein; hypothetical protein 407482 7942800 RPR_02415 Rickettsia peacockii str. Rustic hypothetical protein YP_002916364.1 406262 R 562019 CDS YP_002916365.1 238650513 7942801 complement(407461..408240) 1 NC_012730.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 408240 7942801 RPR_02420 Rickettsia peacockii str. Rustic prolipoprotein diacylglyceryl transferase YP_002916365.1 407461 R 562019 CDS YP_002916366.1 238650514 7942802 408485..409648 1 NC_012730.1 COG0668 Small-conductance mechanosensitive channel; hypothetical protein 409648 7942802 RPR_02430 Rickettsia peacockii str. Rustic hypothetical protein YP_002916366.1 408485 D 562019 CDS YP_002916367.1 238650515 7942803 409840..411522 1 NC_012730.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 411522 7942803 RPR_02435 Rickettsia peacockii str. Rustic putative inner membrane protein translocase component YidC YP_002916367.1 409840 D 562019 CDS YP_002916368.1 238650516 7942804 411526..412071 1 NC_012730.1 COG0558 Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 412071 7942804 RPR_02440 Rickettsia peacockii str. Rustic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002916368.1 411526 D 562019 CDS YP_002916369.1 238650517 7942805 412085..412639 1 NC_012730.1 hypothetical protein 412639 7942805 RPR_02445 Rickettsia peacockii str. Rustic hypothetical protein YP_002916369.1 412085 D 562019 CDS YP_002916370.1 238650518 7942806 complement(412814..413197) 1 NC_012730.1 putative prokaryotic lipoprotein; hypothetical protein 413197 7942806 RPR_02450 Rickettsia peacockii str. Rustic hypothetical protein YP_002916370.1 412814 R 562019 CDS YP_002916371.1 238650519 7942807 complement(415312..415986) 1 NC_012730.1 COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase 415986 7942807 RPR_02485 Rickettsia peacockii str. Rustic peptide deformylase YP_002916371.1 415312 R 562019 CDS YP_002916372.1 238650520 7942808 416185..417690 1 NC_012730.1 COG3202 ATP/ADP translocase; ADP,ATP carrier protein 417690 7942808 RPR_02490 Rickettsia peacockii str. Rustic ADP,ATP carrier protein YP_002916372.1 416185 D 562019 CDS YP_002916373.1 238650521 7942809 417910..419211 1 NC_012730.1 COG2271 Sugar phosphate permease; glycerol-3-phosphate transporter 419211 7942809 RPR_02495 Rickettsia peacockii str. Rustic glycerol-3-phosphate transporter YP_002916373.1 417910 D 562019 CDS YP_002916374.1 238650522 7942810 419236..419658 1 NC_012730.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 419658 ndk 7942810 ndk Rickettsia peacockii str. Rustic nucleoside diphosphate kinase YP_002916374.1 419236 D 562019 CDS YP_002916375.1 238650523 7942811 419662..421530 1 NC_012730.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 421530 7942811 RPR_02505 Rickettsia peacockii str. Rustic tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_002916375.1 419662 D 562019 CDS YP_002916376.1 238650524 7942812 421514..422089 1 NC_012730.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 422089 gidB 7942812 gidB Rickettsia peacockii str. Rustic 16S rRNA methyltransferase GidB YP_002916376.1 421514 D 562019 CDS YP_002916377.1 238650525 7942813 422086..422853 1 NC_012730.1 COG1192 ATPases involved in chromosome partitioning; chromosome partitioning protein 422853 7942813 RPR_02515 Rickettsia peacockii str. Rustic chromosome partitioning protein YP_002916377.1 422086 D 562019 CDS YP_002916378.1 238650526 7942814 422840..423700 1 NC_012730.1 COG1475 Predicted transcriptional regulators; stage 0 sporulation protein J 423700 7942814 RPR_02520 Rickettsia peacockii str. Rustic stage 0 sporulation protein J YP_002916378.1 422840 D 562019 CDS YP_002916379.1 238650527 7942815 423938..425605 1 NC_012730.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 425605 7942815 RPR_02525 Rickettsia peacockii str. Rustic putative ABC transporter ATP-binding protein YP_002916379.1 423938 D 562019 CDS YP_002916380.1 238650528 7942816 425960..426784 1 NC_012730.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 426784 7942816 RPR_02535 Rickettsia peacockii str. Rustic 2-dehydro-3-deoxyphosphooctonate aldolase YP_002916380.1 425960 D 562019 CDS YP_002916381.1 238650529 7942817 complement(428607..428939) 1 NC_012730.1 COG0316 Uncharacterized conserved protein; HesB protein family protein 428939 7942817 RPR_02555 Rickettsia peacockii str. Rustic HesB protein family protein YP_002916381.1 428607 R 562019 CDS YP_002916382.1 238650530 7942818 429169..430323 1 NC_012730.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 430323 7942818 RPR_02560 Rickettsia peacockii str. Rustic deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_002916382.1 429169 D 562019 CDS YP_002916383.1 238650531 7942819 430473..432203 1 NC_012730.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 432203 argS 7942819 argS Rickettsia peacockii str. Rustic arginyl-tRNA synthetase YP_002916383.1 430473 D 562019 CDS YP_002916384.1 238650532 7942820 432376..433050 1 NC_012730.1 hypothetical protein 433050 7942820 RPR_02570 Rickettsia peacockii str. Rustic hypothetical protein YP_002916384.1 432376 D 562019 CDS YP_002916385.1 238650533 7942821 433228..435444 1 NC_012730.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 435444 7942821 RPR_02575 Rickettsia peacockii str. Rustic DNA topoisomerase IV subunit A YP_002916385.1 433228 D 562019 CDS YP_002916386.1 238650534 7942822 complement(436144..437460) 1 NC_012730.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; hypothetical protein 437460 7942822 RPR_02585 Rickettsia peacockii str. Rustic hypothetical protein YP_002916386.1 436144 R 562019 CDS YP_002916387.1 238650535 7942823 437742..438308 1 NC_012730.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 438308 dcd 7942823 dcd Rickettsia peacockii str. Rustic deoxycytidine triphosphate deaminase YP_002916387.1 437742 D 562019 CDS YP_002916388.1 238650536 7942824 438354..438812 1 NC_012730.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 438812 7942824 RPR_02595 Rickettsia peacockii str. Rustic preprotein translocase subunit SecB YP_002916388.1 438354 D 562019 CDS YP_002916389.1 238650537 7942825 439037..439750 1 NC_012730.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional activator protein czcR 439750 7942825 RPR_02600 Rickettsia peacockii str. Rustic transcriptional activator protein czcR YP_002916389.1 439037 D 562019 CDS YP_002916390.1 238650538 7942826 439754..440575 1 NC_012730.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 440575 queF 7942826 queF Rickettsia peacockii str. Rustic 7-cyano-7-deazaguanine reductase YP_002916390.1 439754 D 562019 CDS YP_002916391.1 238650539 7942827 complement(440893..441453) 1 NC_012730.1 COG3820 Uncharacterized protein conserved in bacteria; putative cytoplasmic protein 441453 7942827 RPR_02610 Rickettsia peacockii str. Rustic putative cytoplasmic protein YP_002916391.1 440893 R 562019 CDS YP_002916392.1 238650540 7942828 complement(441508..442659) 1 NC_012730.1 COG1282 NAD/NADP transhydrogenase beta subunit. N-terminal truncation of 82 AA's due to frameshift. Rusults in change from nine putative transmembrane domains to six.; truncated NAD(P) transhydrogenase subunit beta 442659 7942828 RPR_02615 Rickettsia peacockii str. Rustic truncated NAD(P) transhydrogenase subunit beta YP_002916392.1 441508 R 562019 CDS YP_002916393.1 238650541 7942829 complement(443043..443777) 1 NC_012730.1 COG3047 Outer membrane protein W; hypothetical protein 443777 7942829 RPR_02625 Rickettsia peacockii str. Rustic hypothetical protein YP_002916393.1 443043 R 562019 CDS YP_002916394.1 238650542 7942830 443932..444816 1 NC_012730.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 444816 7942830 RPR_02630 Rickettsia peacockii str. Rustic hypothetical protein YP_002916394.1 443932 D 562019 CDS YP_002916395.1 238650543 7942831 444803..446059 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; major facilitator transporter 446059 7942831 RPR_02635 Rickettsia peacockii str. Rustic major facilitator transporter YP_002916395.1 444803 D 562019 CDS YP_002916396.1 238650544 7942833 446895..447197 1 NC_012730.1 preprotein translocase subunit SecG 447197 secG 7942833 secG Rickettsia peacockii str. Rustic preprotein translocase subunit SecG YP_002916396.1 446895 D 562019 CDS YP_002916397.1 238650545 7942834 complement(448103..453301) 1 NC_012730.1 190 kDa antigen precursor 453301 7942834 RPR_02655 Rickettsia peacockii str. Rustic 190 kDa antigen precursor YP_002916397.1 448103 R 562019 CDS YP_002916398.1 238650546 7942835 453598..454977 1 NC_012730.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 454977 cysS 7942835 cysS Rickettsia peacockii str. Rustic cysteinyl-tRNA synthetase YP_002916398.1 453598 D 562019 CDS YP_002916399.1 238650547 7942836 455224..456111 1 NC_012730.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 456111 rpsB 7942836 rpsB Rickettsia peacockii str. Rustic 30S ribosomal protein S2 YP_002916399.1 455224 D 562019 CDS YP_002916400.1 238650548 7942837 456308..457237 1 NC_012730.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 457237 tsf 7942837 tsf Rickettsia peacockii str. Rustic elongation factor Ts YP_002916400.1 456308 D 562019 CDS YP_002916401.1 238650549 7942838 complement(458752..460146) 1 NC_012730.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 460146 7942838 RPR_02690 Rickettsia peacockii str. Rustic 3-deoxy-D-manno-octulosonic-acid transferase YP_002916401.1 458752 R 562019 CDS YP_002916402.1 238650550 7942839 complement(460143..460799) 1 NC_012730.1 COG2121 Uncharacterized protein conserved in bacteria; lipoprotein 460799 7942839 RPR_02695 Rickettsia peacockii str. Rustic lipoprotein YP_002916402.1 460143 R 562019 CDS YP_002916403.1 238650551 7942840 complement(460950..462155) 1 NC_012730.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 462155 7942840 RPR_02700 Rickettsia peacockii str. Rustic aspartate aminotransferase YP_002916403.1 460950 R 562019 CDS YP_002916404.1 238650552 7942841 complement(462277..462471) 1 NC_012730.1 COG4115 Uncharacterized protein conserved in bacteria; hypothetical protein 462471 7942841 RPR_02705 Rickettsia peacockii str. Rustic hypothetical protein YP_002916404.1 462277 R 562019 CDS YP_002916405.1 238650553 7942842 complement(462464..462715) 1 NC_012730.1 COG2161 Antitoxin of toxin-antitoxin stability system; antitoxin of toxin-antitoxin 462715 7942842 RPR_02710 Rickettsia peacockii str. Rustic antitoxin of toxin-antitoxin YP_002916405.1 462464 R 562019 CDS YP_002916406.1 238650554 7942843 463195..463848 1 NC_012730.1 COG0500 SAM-dependent methyltransferases; SAM-dependent methyltransferase 463848 7942843 RPR_02715 Rickettsia peacockii str. Rustic SAM-dependent methyltransferase YP_002916406.1 463195 D 562019 CDS YP_002916407.1 238650555 7942844 463826..464608 1 NC_012730.1 COG2853 Surface lipoprotein; vacJ lipoprotein precursor 464608 7942844 RPR_02720 Rickettsia peacockii str. Rustic vacJ lipoprotein precursor YP_002916407.1 463826 D 562019 CDS YP_002916408.1 238650556 7942845 464628..465227 1 NC_012730.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component; hypothetical protein 465227 7942845 RPR_02725 Rickettsia peacockii str. Rustic hypothetical protein YP_002916408.1 464628 D 562019 CDS YP_002916409.1 238650557 7942846 466467..467534 1 NC_012730.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 467534 alr 7942846 alr Rickettsia peacockii str. Rustic alanine racemase YP_002916409.1 466467 D 562019 CDS YP_002916410.1 238650558 7942847 467691..468470 1 NC_012730.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; ABC transporter permease 468470 7942847 RPR_02755 Rickettsia peacockii str. Rustic ABC transporter permease YP_002916410.1 467691 D 562019 CDS YP_002916411.1 238650559 7942848 468619..469374 1 NC_012730.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; ribonucleotide ABC transporter ATP-binding protein 469374 7942848 RPR_02760 Rickettsia peacockii str. Rustic ribonucleotide ABC transporter ATP-binding protein YP_002916411.1 468619 D 562019 CDS YP_002916412.1 238650560 7942849 469376..469624 1 NC_012730.1 hypothetical membrane protein 469624 7942849 RPR_02765 Rickettsia peacockii str. Rustic hypothetical membrane protein YP_002916412.1 469376 D 562019 CDS YP_002916413.1 238650561 7942850 complement(469702..470106) 1 NC_012730.1 hypothetical protein 470106 7942850 RPR_02770 Rickettsia peacockii str. Rustic hypothetical protein YP_002916413.1 469702 R 562019 CDS YP_002916414.1 238650562 7942851 complement(470189..470473) 1 NC_012730.1 hypothetical protein 470473 7942851 RPR_02775 Rickettsia peacockii str. Rustic hypothetical protein YP_002916414.1 470189 R 562019 CDS YP_002916415.1 238650563 7942852 complement(470781..471278) 1 NC_012730.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins, CheD superfamily; hypothetical protein 471278 7942852 RPR_02780 Rickettsia peacockii str. Rustic hypothetical protein YP_002916415.1 470781 R 562019 CDS YP_002916416.1 238650564 7942853 472074..472367 1 NC_012730.1 required for 70S ribosome assembly; 50S ribosomal protein L28 472367 rpmB 7942853 rpmB Rickettsia peacockii str. Rustic 50S ribosomal protein L28 YP_002916416.1 472074 D 562019 CDS YP_002916417.1 238650565 7942854 472364..472600 1 NC_012730.1 RpmE; RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 472600 7942854 RPR_02805 Rickettsia peacockii str. Rustic 50S ribosomal protein L31 YP_002916417.1 472364 D 562019 CDS YP_002916418.1 238650566 7942856 472958..473596 1 NC_012730.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 473596 engB 7942856 engB Rickettsia peacockii str. Rustic ribosome biogenesis GTP-binding protein YsxC YP_002916418.1 472958 D 562019 CDS YP_002916419.1 238650567 7942857 473544..474467 1 NC_012730.1 COG0548 Acetylglutamate kinase; acetylglutamate kinase 474467 7942857 RPR_02815 Rickettsia peacockii str. Rustic acetylglutamate kinase YP_002916419.1 473544 D 562019 CDS YP_002916420.1 238650568 7942858 474480..474767 1 NC_012730.1 COG3702 Type IV secretory pathway, VirB3 components; type IV secretion system protein VirB3 474767 7942858 RPR_02820 Rickettsia peacockii str. Rustic type IV secretion system protein VirB3 YP_002916420.1 474480 D 562019 CDS YP_002916421.1 238650569 7942859 474983..477400 1 NC_012730.1 COG3451 Type IV secretory pathway, VirB4 components; type IV secretion system ATPase VirB4 477400 7942859 RPR_02825 Rickettsia peacockii str. Rustic type IV secretion system ATPase VirB4 YP_002916421.1 474983 D 562019 CDS YP_002916422.1 238650570 7942860 477518..480484 1 NC_012730.1 COG3704 Type IV secretory pathway, VirB6 components; virB6a protein 480484 7942860 RPR_02830 Rickettsia peacockii str. Rustic virB6a protein YP_002916422.1 477518 D 562019 CDS YP_002916423.1 238650571 7942861 480471..482456 1 NC_012730.1 COG3704 Type IV secretory pathway, VirB6 components; virB6b protein 482456 7942861 RPR_02835 Rickettsia peacockii str. Rustic virB6b protein YP_002916423.1 480471 D 562019 CDS YP_002916424.1 238650572 7942862 482463..485363 1 NC_012730.1 COG3704 Type IV secretory pathway, VirB6 components; virB6c protein 485363 7942862 RPR_02840 Rickettsia peacockii str. Rustic virB6c protein YP_002916424.1 482463 D 562019 CDS YP_002916425.1 238650573 7942863 485537..488212 1 NC_012730.1 COG3704 Type IV secretory pathway, VirB6 components; virB6d protein 488212 7942863 RPR_02845 Rickettsia peacockii str. Rustic virB6d protein YP_002916425.1 485537 D 562019 CDS YP_002916426.1 238650574 7942864 488365..491826 1 NC_012730.1 COG3704 Type IV secretory pathway, VirB6 components; virB6e protein 491826 7942864 RPR_02850 Rickettsia peacockii str. Rustic virB6e protein YP_002916426.1 488365 D 562019 CDS YP_002916427.1 238650575 7942865 495051..495755 1 NC_012730.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 495755 trmD 7942865 trmD Rickettsia peacockii str. Rustic tRNA (guanine-N(1)-)-methyltransferase YP_002916427.1 495051 D 562019 CDS YP_002916428.1 238650576 7942866 495773..496189 1 NC_012730.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 496189 rplS 7942866 rplS Rickettsia peacockii str. Rustic 50S ribosomal protein L19 YP_002916428.1 495773 D 562019 CDS YP_002916429.1 238650577 7942867 496395..497489 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 497489 7942867 RPR_02895 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916429.1 496395 D 562019 CDS YP_002916430.1 238650578 7942869 500043..500321 1 NC_012730.1 COG1396 Predicted transcriptional regulators; transcriptional regulator 500321 7942869 RPR_02925 Rickettsia peacockii str. Rustic transcriptional regulator YP_002916430.1 500043 D 562019 CDS YP_002916431.1 238650579 7942870 500444..501103 1 NC_012730.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 501103 cmk 7942870 cmk Rickettsia peacockii str. Rustic cytidylate kinase YP_002916431.1 500444 D 562019 CDS YP_002916432.1 238650580 7942871 501358..503064 1 NC_012730.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 503064 rpsA 7942871 rpsA Rickettsia peacockii str. Rustic 30S ribosomal protein S1 YP_002916432.1 501358 D 562019 CDS YP_002916433.1 238650581 7942872 503224..503829 1 NC_012730.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 503829 clpP 7942872 clpP Rickettsia peacockii str. Rustic ATP-dependent Clp protease proteolytic subunit YP_002916433.1 503224 D 562019 CDS YP_002916434.1 238650582 7942874 504401..504568 1 NC_012730.1 hypothetical protein 504568 7942874 RPR_02945 Rickettsia peacockii str. Rustic hypothetical protein YP_002916434.1 504401 D 562019 CDS YP_002916435.1 238650583 7942875 504847..505875 1 NC_012730.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase 505875 7942875 RPR_02950 Rickettsia peacockii str. Rustic isopentenyl pyrophosphate isomerase YP_002916435.1 504847 D 562019 CDS YP_002916436.1 238650584 7942876 complement(505906..507000) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 507000 7942876 RPR_02955 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916436.1 505906 R 562019 CDS YP_002916437.1 238650585 7942877 complement(509354..511981) 1 NC_012730.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 511981 7942877 RPR_02990 Rickettsia peacockii str. Rustic DNA polymerase I YP_002916437.1 509354 R 562019 CDS YP_002916438.1 238650586 7942878 complement(512145..513056) 1 NC_012730.1 COG0552 Signal recognition particle GTPase; cell division protein 513056 7942878 RPR_02995 Rickettsia peacockii str. Rustic cell division protein YP_002916438.1 512145 R 562019 CDS YP_002916439.1 238650587 7942879 complement(513260..513733) 1 NC_012730.1 COG2913 Small protein A (tmRNA-binding); SmpA/OmlA family lipoprotein 513733 7942879 RPR_03000 Rickettsia peacockii str. Rustic SmpA/OmlA family lipoprotein YP_002916439.1 513260 R 562019 CDS YP_002916440.1 238650588 7942880 513829..514029 1 NC_012730.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 514029 rpmF 7942880 rpmF Rickettsia peacockii str. Rustic 50S ribosomal protein L32 YP_002916440.1 513829 D 562019 CDS YP_002916441.1 238650589 7942000 514037..514993 1 NC_012730.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 514993 7942000 RPR_03010 Rickettsia peacockii str. Rustic 3-oxoacyl-(acyl carrier protein) synthase III YP_002916441.1 514037 D 562019 CDS YP_002916442.1 238650590 7942001 515481..515948 1 NC_012730.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein precursor 515948 7942001 RPR_03020 Rickettsia peacockii str. Rustic peptidoglycan-associated lipoprotein precursor YP_002916442.1 515481 D 562019 CDS YP_002916443.1 238650591 7942003 516376..517464 1 NC_012730.1 COG0795 Predicted permeases; hypothetical protein 517464 7942003 RPR_03025 Rickettsia peacockii str. Rustic hypothetical protein YP_002916443.1 516376 D 562019 CDS YP_002916444.1 238650592 7942004 517675..518715 1 NC_012730.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 518715 7942004 RPR_03030 Rickettsia peacockii str. Rustic rod shape-determining protein MreB YP_002916444.1 517675 D 562019 CDS YP_002916445.1 238650593 7942005 518727..519566 1 NC_012730.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 519566 7942005 RPR_03035 Rickettsia peacockii str. Rustic rod shape-determining protein MreC YP_002916445.1 518727 D 562019 CDS YP_002916446.1 238650594 7942006 519920..520156 1 NC_012730.1 COG1396 Predicted transcriptional regulators; hypothetical protein 520156 7942006 RPR_03040 Rickettsia peacockii str. Rustic hypothetical protein YP_002916446.1 519920 D 562019 CDS YP_002916447.1 238650595 7942007 520297..520986 1 NC_012730.1 COG0194 Guanylate kinase; guanylate kinase 520986 gmk 7942007 gmk Rickettsia peacockii str. Rustic guanylate kinase YP_002916447.1 520297 D 562019 CDS YP_002916448.1 238650596 7942008 521056..522210 1 NC_012730.1 COG1373 Predicted ATPase (AAA+ superfamily); ATPase 522210 7942008 RPR_03050 Rickettsia peacockii str. Rustic ATPase YP_002916448.1 521056 D 562019 CDS YP_002916449.1 238650597 7942009 complement(522476..523543) 1 NC_012730.1 hypothetical protein 523543 7942009 RPR_03060 Rickettsia peacockii str. Rustic hypothetical protein YP_002916449.1 522476 R 562019 CDS YP_002916450.1 238650598 7942010 complement(523620..525401) 1 NC_012730.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein 525401 7942010 RPR_03065 Rickettsia peacockii str. Rustic ABC transporter ATP-binding protein YP_002916450.1 523620 R 562019 CDS YP_002916451.1 238650599 7942011 complement(525683..526969) 1 NC_012730.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 526969 7942011 RPR_03070 Rickettsia peacockii str. Rustic 3-oxoacyl-(acyl carrier protein) synthase II YP_002916451.1 525683 R 562019 CDS YP_002916452.1 238650600 7942012 complement(527006..527251) 1 NC_012730.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 527251 acpP 7942012 acpP Rickettsia peacockii str. Rustic acyl carrier protein YP_002916452.1 527006 R 562019 CDS YP_002916453.1 238650601 7942013 complement(527430..528155) 1 NC_012730.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 528155 fabG 7942013 fabG Rickettsia peacockii str. Rustic 3-ketoacyl-ACP reductase YP_002916453.1 527430 R 562019 CDS YP_002916454.1 238650602 7942014 complement(528148..529179) 1 NC_012730.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 529179 recA 7942014 recA Rickettsia peacockii str. Rustic recombinase A YP_002916454.1 528148 R 562019 CDS YP_002916455.1 238650603 7942015 complement(531654..532955) 1 NC_012730.1 hypothetical protein 532955 7942015 RPR_03120 Rickettsia peacockii str. Rustic hypothetical protein YP_002916455.1 531654 R 562019 CDS YP_002916456.1 238650604 7942016 complement(533348..534685) 1 NC_012730.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 534685 trmE 7942016 trmE Rickettsia peacockii str. Rustic tRNA modification GTPase TrmE YP_002916456.1 533348 R 562019 CDS YP_002916457.1 238650605 7942017 534770..539518 1 NC_012730.1 COG2902 NAD-specific glutamate dehydrogenase; hypothetical protein 539518 7942017 RPR_03130 Rickettsia peacockii str. Rustic hypothetical protein YP_002916457.1 534770 D 562019 CDS YP_002916458.1 238650606 7942018 539531..539875 1 NC_012730.1 COG1426 Uncharacterized protein conserved in bacteria; hypothetical protein 539875 7942018 RPR_03135 Rickettsia peacockii str. Rustic hypothetical protein YP_002916458.1 539531 D 562019 CDS YP_002916459.1 238650607 7942019 539882..540229 1 NC_012730.1 COG0419 ATPase involved in DNA repair; hypothetical protein 540229 7942019 RPR_03140 Rickettsia peacockii str. Rustic hypothetical protein YP_002916459.1 539882 D 562019 CDS YP_002916460.1 238650608 7942020 540232..540549 1 NC_012730.1 COG3027 Uncharacterized protein conserved in bacteria; hypothetical protein 540549 7942020 RPR_03145 Rickettsia peacockii str. Rustic hypothetical protein YP_002916460.1 540232 D 562019 CDS YP_002916461.1 238650609 7942021 540877..542118 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter 542118 7942021 RPR_03150 Rickettsia peacockii str. Rustic proline/betaine transporter YP_002916461.1 540877 D 562019 CDS YP_002916462.1 238650610 7942022 542220..542807 1 NC_012730.1 hypothetical protein 542807 7942022 RPR_03155 Rickettsia peacockii str. Rustic hypothetical protein YP_002916462.1 542220 D 562019 CDS YP_002916463.1 238650611 7942023 complement(544040..544534) 1 NC_012730.1 COG1396 Predicted transcriptional regulators; hypothetical protein 544534 7942023 RPR_03170 Rickettsia peacockii str. Rustic hypothetical protein YP_002916463.1 544040 R 562019 CDS YP_002916464.1 238650612 7942024 complement(544818..546023) 1 NC_012730.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 546023 7942024 RPR_03175 Rickettsia peacockii str. Rustic aspartate kinase YP_002916464.1 544818 R 562019 CDS YP_002916465.1 238650613 7942025 complement(546307..546567) 1 NC_012730.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 546567 rpmA 7942025 rpmA Rickettsia peacockii str. Rustic 50S ribosomal protein L27 YP_002916465.1 546307 R 562019 CDS YP_002916466.1 238650614 7942026 complement(546592..546909) 1 NC_012730.1 COG0261 Ribosomal protein L21; 50S ribosomal protein L21 546909 rplU 7942026 rplU Rickettsia peacockii str. Rustic 50S ribosomal protein L21 YP_002916466.1 546592 R 562019 CDS YP_002916467.1 238650615 7942027 complement(546998..547597) 1 NC_012730.1 COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidylglycerophosphatase A 547597 7942027 RPR_03190 Rickettsia peacockii str. Rustic phosphatidylglycerophosphatase A YP_002916467.1 546998 R 562019 CDS YP_002916468.1 238650616 7942028 547678..547845 1 NC_012730.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 547845 tatA 7942028 tatA Rickettsia peacockii str. Rustic twin arginine translocase protein A YP_002916468.1 547678 D 562019 CDS YP_002916469.1 238650617 7942029 complement(548077..549195) 1 NC_012730.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component; hypothetical protein 549195 7942029 RPR_03200 Rickettsia peacockii str. Rustic hypothetical protein YP_002916469.1 548077 R 562019 CDS YP_002916470.1 238650618 7942030 549220..550065 1 NC_012730.1 COG0313 Predicted methyltransferases; tetrapyrrole methylase 550065 7942030 RPR_03205 Rickettsia peacockii str. Rustic tetrapyrrole methylase YP_002916470.1 549220 D 562019 CDS YP_002916471.1 238650619 7942031 complement(551100..551276) 1 NC_012730.1 COG5510 Predicted small secreted protein; entericidin B-like protein 551276 7942031 RPR_03225 Rickettsia peacockii str. Rustic entericidin B-like protein YP_002916471.1 551100 R 562019 CDS YP_002916472.1 238650620 7942032 551514..551954 1 NC_012730.1 hypothetical protein 551954 7942032 RPR_03230 Rickettsia peacockii str. Rustic hypothetical protein YP_002916472.1 551514 D 562019 CDS YP_002916473.1 238650621 7942033 552106..552297 1 NC_012730.1 hypothetical protein 552297 7942033 RPR_03235 Rickettsia peacockii str. Rustic hypothetical protein YP_002916473.1 552106 D 562019 CDS YP_002916474.1 238650622 7942034 552342..552824 1 NC_012730.1 hypothetical protein 552824 7942034 RPR_03240 Rickettsia peacockii str. Rustic hypothetical protein YP_002916474.1 552342 D 562019 CDS YP_002916475.1 238650623 7942035 complement(552898..553530) 1 NC_012730.1 COG0177 Predicted EndoIII-related endonuclease; endonuclease III 553530 7942035 RPR_03245 Rickettsia peacockii str. Rustic endonuclease III YP_002916475.1 552898 R 562019 CDS YP_002916476.1 238650624 7942036 553568..553903 1 NC_012730.1 COG0278 Glutaredoxin-related protein; glutaredoxin 553903 7942036 RPR_03250 Rickettsia peacockii str. Rustic glutaredoxin YP_002916476.1 553568 D 562019 CDS YP_002916477.1 238650625 7942037 554059..554709 1 NC_012730.1 COG0400 Predicted esterase; carboxylesterase 554709 7942037 RPR_03255 Rickettsia peacockii str. Rustic carboxylesterase YP_002916477.1 554059 D 562019 CDS YP_002916478.1 238650626 7942038 554824..556086 1 NC_012730.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 556086 glyA 7942038 glyA Rickettsia peacockii str. Rustic serine hydroxymethyltransferase YP_002916478.1 554824 D 562019 CDS YP_002916479.1 238650627 7942039 556079..556969 1 NC_012730.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 556969 7942039 RPR_03265 Rickettsia peacockii str. Rustic lipoyl synthase YP_002916479.1 556079 D 562019 CDS YP_002916480.1 238650628 7942040 557651..558154 1 NC_012730.1 COG0319 Predicted metal-dependent hydrolase; putative metalloprotease 558154 7942040 RPR_03280 Rickettsia peacockii str. Rustic putative metalloprotease YP_002916480.1 557651 D 562019 CDS YP_002916481.1 238650629 7942041 558171..559070 1 NC_012730.1 COG1253 Hemolysins and related proteins containing CBS domains; hemolysin 559070 7942041 RPR_03285 Rickettsia peacockii str. Rustic hemolysin YP_002916481.1 558171 D 562019 CDS YP_002916482.1 238650630 7942042 complement(560638..562047) 1 NC_012730.1 COG3202 ATP/ADP translocase; ADP,ATP carrier protein 562047 7942042 RPR_03305 Rickettsia peacockii str. Rustic ADP,ATP carrier protein YP_002916482.1 560638 R 562019 CDS YP_002916483.1 238650631 7942043 562486..563169 1 NC_012730.1 COG3243 Poly(3-hydroxyalkanoate) synthetase; Poly-beta-hydroxybutyrate polymerase 563169 7942043 RPR_03310 Rickettsia peacockii str. Rustic Poly-beta-hydroxybutyrate polymerase YP_002916483.1 562486 D 562019 CDS YP_002916484.1 238650632 7942044 complement(567581..568675) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 568675 7942044 RPR_03370 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916484.1 567581 R 562019 CDS YP_002916485.1 238650633 7942045 568956..569297 1 NC_012730.1 COG0666 FOG: Ankyrin repeat; ankyrin repeat-containing protein 569297 7942045 RPR_03380 Rickettsia peacockii str. Rustic ankyrin repeat-containing protein YP_002916485.1 568956 D 562019 CDS YP_002916486.1 238650634 7942046 569817..570911 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 570911 7942046 RPR_03390 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916486.1 569817 D 562019 CDS YP_002916487.1 238650635 7942047 complement(571215..573134) 1 NC_012730.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 573134 uvrC 7942047 uvrC Rickettsia peacockii str. Rustic excinuclease ABC subunit C YP_002916487.1 571215 R 562019 CDS YP_002916488.1 238650636 7942048 complement(573309..573836) 1 NC_012730.1 COG2847 Uncharacterized protein conserved in bacteria; hypothetical protein 573836 7942048 RPR_03400 Rickettsia peacockii str. Rustic hypothetical protein YP_002916488.1 573309 R 562019 CDS YP_002916489.1 238650637 7942050 complement(581497..584217) 1 NC_012730.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 584217 7942050 RPR_03495 Rickettsia peacockii str. Rustic preprotein translocase subunit SecA YP_002916489.1 581497 R 562019 CDS YP_002916490.1 238650638 7942051 584433..585281 1 NC_012730.1 COG0760 Parvulin-like peptidyl-prolyl isomerase; protein export protein prsA precursor 585281 7942051 RPR_03500 Rickettsia peacockii str. Rustic protein export protein prsA precursor YP_002916490.1 584433 D 562019 CDS YP_002916491.1 238650639 7942052 complement(585492..585887) 1 NC_012730.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 585887 acpS 7942052 acpS Rickettsia peacockii str. Rustic 4'-phosphopantetheinyl transferase YP_002916491.1 585492 R 562019 CDS YP_002916492.1 238650640 7942053 complement(585888..586271) 1 NC_012730.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 586271 rpoZ 7942053 rpoZ Rickettsia peacockii str. Rustic DNA-directed RNA polymerase subunit omega YP_002916492.1 585888 R 562019 CDS YP_002916493.1 238650641 7942054 complement(586450..587709) 1 NC_012730.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 587709 7942054 RPR_03515 Rickettsia peacockii str. Rustic UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002916493.1 586450 R 562019 CDS YP_002916494.1 238650642 7942055 complement(587801..590224) 1 NC_012730.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 590224 gyrB 7942055 gyrB Rickettsia peacockii str. Rustic DNA gyrase subunit B YP_002916494.1 587801 R 562019 CDS YP_002916495.1 238650643 7942056 590330..591190 1 NC_012730.1 COG0647 Predicted sugar phosphatases of the HAD superfamily; HAD family hydrolase 591190 7942056 RPR_03525 Rickettsia peacockii str. Rustic HAD family hydrolase YP_002916495.1 590330 D 562019 CDS YP_002916496.1 238650644 7942058 591696..593066 1 NC_012730.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); Mg2+ transporter 593066 7942058 RPR_03530 Rickettsia peacockii str. Rustic Mg2+ transporter YP_002916496.1 591696 D 562019 CDS YP_002916497.1 238650645 7942060 complement(596332..596562) 1 NC_012730.1 COG4710 Predicted DNA-binding protein with an HTH domain; putative antitoxin of toxin-antitoxin 596562 7942060 RPR_03550 Rickettsia peacockii str. Rustic putative antitoxin of toxin-antitoxin YP_002916497.1 596332 R 562019 CDS YP_002916498.1 238650646 7942061 596954..597379 1 NC_012730.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 597379 yajC 7942061 yajC Rickettsia peacockii str. Rustic preprotein translocase subunit YajC YP_002916498.1 596954 D 562019 CDS YP_002916499.1 238650647 7942062 597363..598919 1 NC_012730.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 598919 secD 7942062 secD Rickettsia peacockii str. Rustic preprotein translocase subunit SecD YP_002916499.1 597363 D 562019 CDS YP_002916500.1 238650648 7942063 599164..599781 1 NC_012730.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems; sco2 protein precursor 599781 7942063 RPR_03565 Rickettsia peacockii str. Rustic sco2 protein precursor YP_002916500.1 599164 D 562019 CDS YP_002916501.1 238650649 7942064 599883..600269 1 NC_012730.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 600269 7942064 RPR_03570 Rickettsia peacockii str. Rustic cytochrome c-type biogenesis protein CcmE YP_002916501.1 599883 D 562019 CDS YP_002916502.1 238650650 7942065 600397..600918 1 NC_012730.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 600918 7942065 RPR_03575 Rickettsia peacockii str. Rustic inorganic pyrophosphatase YP_002916502.1 600397 D 562019 CDS YP_002916503.1 238650651 7942066 601129..602796 1 NC_012730.1 COG0728 Uncharacterized membrane protein, putative virulence factor; integral membrane protein MviN 602796 7942066 RPR_03580 Rickettsia peacockii str. Rustic integral membrane protein MviN YP_002916503.1 601129 D 562019 CDS YP_002916504.1 238650652 7942067 602777..603529 1 NC_012730.1 hypothetical protein 603529 7942067 RPR_03585 Rickettsia peacockii str. Rustic hypothetical protein YP_002916504.1 602777 D 562019 CDS YP_002916505.1 238650653 7942068 complement(605425..607566) 1 NC_012730.1 COG1200 RecG-like helicase; ATP-dependent DNA helicase 607566 7942068 RPR_03605 Rickettsia peacockii str. Rustic ATP-dependent DNA helicase YP_002916505.1 605425 R 562019 CDS YP_002916506.1 238650654 7942069 607752..608846 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 608846 7942069 RPR_03610 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916506.1 607752 D 562019 CDS YP_002916507.1 238650655 7942070 complement(608872..609228) 1 NC_012730.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 609228 rnpA 7942070 rnpA Rickettsia peacockii str. Rustic ribonuclease P YP_002916507.1 608872 R 562019 CDS YP_002916508.1 238650656 7942071 complement(609248..609382) 1 NC_012730.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 609382 rpmH 7942071 rpmH Rickettsia peacockii str. Rustic 50S ribosomal protein L34 YP_002916508.1 609248 R 562019 CDS YP_002916509.1 238650657 7942072 complement(609465..609818) 1 NC_012730.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 609818 rplT 7942072 rplT Rickettsia peacockii str. Rustic 50S ribosomal protein L20 YP_002916509.1 609465 R 562019 CDS YP_002916510.1 238650658 7942073 complement(609838..610044) 1 NC_012730.1 COG0291 Ribosomal protein L35; 50S ribosomal protein L35 610044 rpmI 7942073 rpmI Rickettsia peacockii str. Rustic 50S ribosomal protein L35 YP_002916510.1 609838 R 562019 CDS YP_002916511.1 238650659 7942074 610210..610887 1 NC_012730.1 COG0602 Organic radical activating enzymes; queuosine biosynthesis protein 610887 7942074 RPR_03635 Rickettsia peacockii str. Rustic queuosine biosynthesis protein YP_002916511.1 610210 D 562019 CDS YP_002916512.1 238650660 7942075 611642..612253 1 NC_012730.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 612253 7942075 RPR_03650 Rickettsia peacockii str. Rustic 50S ribosomal protein L25/general stress protein Ctc YP_002916512.1 611642 D 562019 CDS YP_002916513.1 238650661 7942076 612575..613123 1 NC_012730.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 613123 7942076 RPR_03655 Rickettsia peacockii str. Rustic peptidyl-tRNA hydrolase YP_002916513.1 612575 D 562019 CDS YP_002916514.1 238650662 7942077 613762..614859 1 NC_012730.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 614859 7942077 RPR_03670 Rickettsia peacockii str. Rustic GTP-dependent nucleic acid-binding protein EngD YP_002916514.1 613762 D 562019 CDS YP_002916515.1 238651135 7942078 complement(617437..618666) 1 NC_012730.1 COG3621 Patatin [General function prediction only]. As a result of a frameshift mutation, protein is truncated relative to most but not all rickettsial patatins, and contains the entire patatin superfamily domain; truncated putative patatin b1 precursor 618666 7942078 RPR_03690 Rickettsia peacockii str. Rustic truncated putative patatin b1 precursor YP_002916515.1 617437 R 562019 CDS YP_002916516.1 238650663 7942160 complement(619952..621349) 1 NC_012730.1 COG0591 Na+/proline symporter; major facilitator superfamily permease 621349 7942160 RPR_03720 Rickettsia peacockii str. Rustic major facilitator superfamily permease YP_002916516.1 619952 R 562019 CDS YP_002916517.1 238650664 7942079 complement(622002..622520) 1 NC_012730.1 COG0666 FOG: Ankyrin repeat; hypothetical protein 622520 7942079 RPR_03725 Rickettsia peacockii str. Rustic hypothetical protein YP_002916517.1 622002 R 562019 CDS YP_002916518.1 238650665 7942080 622944..623393 1 NC_012730.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 623393 7942080 RPR_03730 Rickettsia peacockii str. Rustic cell division protein MraZ YP_002916518.1 622944 D 562019 CDS YP_002916519.1 238650666 7942081 623393..624316 1 NC_012730.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; S-adenosyl-methyltransferase MraW 624316 mraW 7942081 mraW Rickettsia peacockii str. Rustic S-adenosyl-methyltransferase MraW YP_002916519.1 623393 D 562019 CDS YP_002916520.1 238650667 7942574 624323..624721 1 NC_012730.1 cell division protein FtsL 624721 7942574 RPR_03740 Rickettsia peacockii str. Rustic cell division protein FtsL YP_002916520.1 624323 D 562019 CDS YP_002916521.1 238650668 7942575 625065..626750 1 NC_012730.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2; cell division protein 626750 7942575 RPR_03745 Rickettsia peacockii str. Rustic cell division protein YP_002916521.1 625065 D 562019 CDS YP_002916522.1 238650669 7942576 626925..627119 1 NC_012730.1 hypothetical protein 627119 7942576 RPR_03750 Rickettsia peacockii str. Rustic hypothetical protein YP_002916522.1 626925 D 562019 CDS YP_002916523.1 238650670 7942577 627369..627890 1 NC_012730.1 hypothetical protein 627890 7942577 RPR_03755 Rickettsia peacockii str. Rustic hypothetical protein YP_002916523.1 627369 D 562019 CDS YP_002916524.1 238650671 7942578 627880..629661 1 NC_012730.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 629661 7942578 RPR_03760 Rickettsia peacockii str. Rustic penicillin-binding protein YP_002916524.1 627880 D 562019 CDS YP_002916525.1 238650672 7942579 complement(631507..633252) 1 NC_012730.1 COG1357 Uncharacterized low-complexity proteins; hypothetical protein 633252 7942579 RPR_03775 Rickettsia peacockii str. Rustic hypothetical protein YP_002916525.1 631507 R 562019 CDS YP_002916526.1 238650673 7942580 complement(633245..634669) 1 NC_012730.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; nitrogen assimilation regulatory protein ntrX 634669 7942580 RPR_03780 Rickettsia peacockii str. Rustic nitrogen assimilation regulatory protein ntrX YP_002916526.1 633245 R 562019 CDS YP_002916527.1 238650674 7942581 635176..635475 1 NC_012730.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit F 635475 7942581 RPR_03785 Rickettsia peacockii str. Rustic putative monovalent cation/H+ antiporter subunit F YP_002916527.1 635176 D 562019 CDS YP_002916528.1 238650675 7942582 635456..636742 1 NC_012730.1 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase 636742 7942582 RPR_03790 Rickettsia peacockii str. Rustic 2-octaprenyl-6-methoxyphenyl hydroxylase YP_002916528.1 635456 D 562019 CDS YP_002916529.1 238650676 7942583 647188..647826 1 NC_012730.1 COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 647826 7942583 RPR_03885 Rickettsia peacockii str. Rustic hypothetical protein YP_002916529.1 647188 D 562019 CDS YP_002916530.1 238650677 7942584 648111..648848 1 NC_012730.1 LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily; hypothetical protein 648848 7942584 RPR_03890 Rickettsia peacockii str. Rustic hypothetical protein YP_002916530.1 648111 D 562019 CDS YP_002916531.1 238650678 7942585 650799..651893 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 651893 7942585 RPR_03920 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916531.1 650799 D 562019 CDS YP_002916532.1 238650679 7942586 complement(652092..653939) 1 NC_012730.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 653939 aspS 7942586 aspS Rickettsia peacockii str. Rustic aspartyl-tRNA synthetase YP_002916532.1 652092 R 562019 CDS YP_002916533.1 238650680 7942587 complement(654000..654434) 1 NC_012730.1 hypothetical protein 654434 7942587 RPR_03930 Rickettsia peacockii str. Rustic hypothetical protein YP_002916533.1 654000 R 562019 CDS YP_002916534.1 238650681 7942588 complement(654517..655317) 1 NC_012730.1 COG1192 ATPases involved in chromosome partitioning; chromosome partitioning ATPase protein 655317 7942588 RPR_03935 Rickettsia peacockii str. Rustic chromosome partitioning ATPase protein YP_002916534.1 654517 R 562019 CDS YP_002916535.1 238650682 7942589 complement(655536..657038) 1 NC_012730.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 657038 7942589 RPR_03940 Rickettsia peacockii str. Rustic leucyl aminopeptidase YP_002916535.1 655536 R 562019 CDS YP_002916536.1 238650683 7942590 657247..658368 1 NC_012730.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kDa subunit; hypothetical protein 658368 7942590 RPR_03945 Rickettsia peacockii str. Rustic hypothetical protein YP_002916536.1 657247 D 562019 CDS YP_002916537.1 238650684 7942591 complement(658772..662890) 1 NC_012730.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 662890 7942591 RPR_03950 Rickettsia peacockii str. Rustic DNA-directed RNA polymerase subunit beta' YP_002916537.1 658772 R 562019 CDS YP_002916538.1 238650685 7942592 complement(663148..667269) 1 NC_012730.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 667269 rpoB 7942592 rpoB Rickettsia peacockii str. Rustic DNA-directed RNA polymerase subunit beta YP_002916538.1 663148 R 562019 CDS YP_002916539.1 238650686 7942593 complement(668076..668510) 1 NC_012730.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 668510 rplL 7942593 rplL Rickettsia peacockii str. Rustic 50S ribosomal protein L7/L12 YP_002916539.1 668076 R 562019 CDS YP_002916540.1 238650687 7942594 complement(668654..669163) 1 NC_012730.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 669163 rplJ 7942594 rplJ Rickettsia peacockii str. Rustic 50S ribosomal protein L10 YP_002916540.1 668654 R 562019 CDS YP_002916541.1 238650688 7942595 complement(669274..669993) 1 NC_012730.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 669993 rplA 7942595 rplA Rickettsia peacockii str. Rustic 50S ribosomal protein L1 YP_002916541.1 669274 R 562019 CDS YP_002916542.1 238650689 7942596 complement(669999..670436) 1 NC_012730.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 670436 rplK 7942596 rplK Rickettsia peacockii str. Rustic 50S ribosomal protein L11 YP_002916542.1 669999 R 562019 CDS YP_002916543.1 238650690 7942597 complement(670707..671285) 1 NC_012730.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 671285 nusG 7942597 nusG Rickettsia peacockii str. Rustic transcription antitermination protein NusG YP_002916543.1 670707 R 562019 CDS YP_002916544.1 238650691 7942598 complement(671301..671555) 1 NC_012730.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 671555 secE 7942598 secE Rickettsia peacockii str. Rustic preprotein translocase subunit SecE YP_002916544.1 671301 R 562019 CDS YP_002916545.1 238650692 7942600 complement(671923..674022) 1 NC_012730.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 674022 7942600 RPR_03990 Rickettsia peacockii str. Rustic elongation factor G YP_002916545.1 671923 R 562019 CDS YP_002916546.1 238650693 7942601 complement(674034..674516) 1 NC_012730.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 674516 7942601 RPR_03995 Rickettsia peacockii str. Rustic 30S ribosomal protein S7 YP_002916546.1 674034 R 562019 CDS YP_002916547.1 238650694 7942602 complement(674543..674932) 1 NC_012730.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 674932 rpsL 7942602 rpsL Rickettsia peacockii str. Rustic 30S ribosomal protein S12 YP_002916547.1 674543 R 562019 CDS YP_002916548.1 238650695 7942603 complement(675093..675749) 1 NC_012730.1 COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease 675749 7942603 RPR_04005 Rickettsia peacockii str. Rustic amino acid ABC transporter permease YP_002916548.1 675093 R 562019 CDS YP_002916549.1 238650696 7942604 complement(675896..677686) 1 NC_012730.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 677686 sdhA 7942604 sdhA Rickettsia peacockii str. Rustic succinate dehydrogenase flavoprotein subunit YP_002916549.1 675896 R 562019 CDS YP_002916550.1 238650697 7942605 complement(677820..678197) 1 NC_012730.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit; succinate dehydrogenase membrane anchor subunit 678197 7942605 RPR_04015 Rickettsia peacockii str. Rustic succinate dehydrogenase membrane anchor subunit YP_002916550.1 677820 R 562019 CDS YP_002916551.1 238650698 7942606 complement(678345..678719) 1 NC_012730.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; succinate dehydrogenase cytochrome b-556 subunit 678719 7942606 RPR_04025 Rickettsia peacockii str. Rustic succinate dehydrogenase cytochrome b-556 subunit YP_002916551.1 678345 R 562019 CDS YP_002916552.1 238650699 7942607 complement(678886..679629) 1 NC_012730.1 COG1054 Predicted sulfurtransferase; hypothetical protein 679629 7942607 RPR_04030 Rickettsia peacockii str. Rustic hypothetical protein YP_002916552.1 678886 R 562019 CDS YP_002916553.1 238650700 7942608 complement(679802..681280) 1 NC_012730.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; endopeptidase 681280 7942608 RPR_04035 Rickettsia peacockii str. Rustic endopeptidase YP_002916553.1 679802 R 562019 CDS YP_002916554.1 238650701 7942609 complement(681318..682178) 1 NC_012730.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs; protease activity modulator 682178 7942609 RPR_04040 Rickettsia peacockii str. Rustic protease activity modulator YP_002916554.1 681318 R 562019 CDS YP_002916555.1 238650702 7942610 complement(682271..683311) 1 NC_012730.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs; protease activity modulator HflK 683311 7942610 RPR_04045 Rickettsia peacockii str. Rustic protease activity modulator HflK YP_002916555.1 682271 R 562019 CDS YP_002916556.1 238650703 7942611 683417..684376 1 NC_012730.1 COG0489 ATPases involved in chromosome partitioning; Mrp protein 684376 7942611 RPR_04050 Rickettsia peacockii str. Rustic Mrp protein YP_002916556.1 683417 D 562019 CDS YP_002916557.1 238650704 7942612 684373..685419 1 NC_012730.1 COG3660 Predicted nucleoside-diphosphate-sugar epimerase; hypothetical protein 685419 7942612 RPR_04055 Rickettsia peacockii str. Rustic hypothetical protein YP_002916557.1 684373 D 562019 CDS YP_002916558.1 238650705 7942613 685528..686097 1 NC_012730.1 hypothetical protein 686097 7942613 RPR_04060 Rickettsia peacockii str. Rustic hypothetical protein YP_002916558.1 685528 D 562019 CDS YP_002916559.1 238650706 7942614 complement(686078..686770) 1 NC_012730.1 COG0565 rRNA methylase; rRNA methylase 686770 7942614 RPR_04065 Rickettsia peacockii str. Rustic rRNA methylase YP_002916559.1 686078 R 562019 CDS YP_002916560.1 238650707 7942615 complement(686772..687245) 1 NC_012730.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 687245 ruvC 7942615 ruvC Rickettsia peacockii str. Rustic Holliday junction resolvase YP_002916560.1 686772 R 562019 CDS YP_002916561.1 238650708 7942616 complement(687363..688382) 1 NC_012730.1 COG1159 GTPase; GTP-binding protein Era 688382 era 7942616 era Rickettsia peacockii str. Rustic GTP-binding protein Era YP_002916561.1 687363 R 562019 CDS YP_002916562.1 238650709 7942617 complement(688375..689058) 1 NC_012730.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 689058 rnc 7942617 rnc Rickettsia peacockii str. Rustic ribonuclease III YP_002916562.1 688375 R 562019 CDS YP_002916563.1 238650710 7942618 complement(689058..689858) 1 NC_012730.1 COG0681 Signal peptidase I; signal peptidase I 689858 7942618 RPR_04085 Rickettsia peacockii str. Rustic signal peptidase I YP_002916563.1 689058 R 562019 CDS YP_002916564.1 238650711 7942619 complement(690042..691307) 1 NC_012730.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 691307 7942619 RPR_04090 Rickettsia peacockii str. Rustic NADH dehydrogenase I subunit F YP_002916564.1 690042 R 562019 CDS YP_002916565.1 238650712 7942620 complement(691472..692398) 1 NC_012730.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 692398 secF 7942620 secF Rickettsia peacockii str. Rustic preprotein translocase subunit SecF YP_002916565.1 691472 R 562019 CDS YP_002916566.1 238650713 7942621 692471..692707 1 NC_012730.1 COG3750 Uncharacterized protein conserved in bacteria; hypothetical protein 692707 7942621 RPR_04100 Rickettsia peacockii str. Rustic hypothetical protein YP_002916566.1 692471 D 562019 CDS YP_002916567.1 238650714 7942622 complement(692763..693857) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 693857 7942622 RPR_04105 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916567.1 692763 R 562019 CDS YP_002916568.1 238650715 7942623 complement(694602..695993) 1 NC_012730.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 695993 dnaA 7942623 dnaA Rickettsia peacockii str. Rustic chromosomal replication initiation protein YP_002916568.1 694602 R 562019 CDS YP_002916569.1 238650716 7942624 complement(695994..696326) 1 NC_012730.1 COG0607 Rhodanese-related sulfurtransferase; hypothetical protein 696326 7942624 RPR_04115 Rickettsia peacockii str. Rustic hypothetical protein YP_002916569.1 695994 R 562019 CDS YP_002916570.1 238650717 7942625 696482..696745 1 NC_012730.1 COG2938 Uncharacterized conserved protein; hypothetical protein 696745 7942625 RPR_04120 Rickettsia peacockii str. Rustic hypothetical protein YP_002916570.1 696482 D 562019 CDS YP_002916571.1 238650718 7942626 696757..700125 1 NC_012730.1 COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor 700125 7942626 RPR_04125 Rickettsia peacockii str. Rustic transcription-repair coupling factor YP_002916571.1 696757 D 562019 CDS YP_002916572.1 238650719 7942627 700272..701711 1 NC_012730.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 701711 murE 7942627 murE Rickettsia peacockii str. Rustic UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002916572.1 700272 D 562019 CDS YP_002916573.1 238650720 7942628 701920..703269 1 NC_012730.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 703269 7942628 RPR_04135 Rickettsia peacockii str. Rustic UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_002916573.1 701920 D 562019 CDS YP_002916574.1 238650721 7942629 703454..704539 1 NC_012730.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 704539 mraY 7942629 mraY Rickettsia peacockii str. Rustic phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002916574.1 703454 D 562019 CDS YP_002916575.1 238650722 7942630 complement(704800..705894) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 705894 7942630 RPR_04150 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916575.1 704800 R 562019 CDS YP_002916576.1 238650723 7942631 706087..706371 1 NC_012730.1 hypothetical protein 706371 7942631 RPR_04155 Rickettsia peacockii str. Rustic hypothetical protein YP_002916576.1 706087 D 562019 CDS YP_002916577.1 238650724 7942632 708774..709262 1 NC_012730.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 709262 7942632 RPR_04180 Rickettsia peacockii str. Rustic guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase YP_002916577.1 708774 D 562019 CDS YP_002916578.1 238650725 7942633 complement(710362..711462) 1 NC_012730.1 COG0772 Bacterial cell division membrane protein; rod shape-determining protein rodA 711462 7942633 RPR_04190 Rickettsia peacockii str. Rustic rod shape-determining protein rodA YP_002916578.1 710362 R 562019 CDS YP_002916579.1 238650726 7942634 complement(711584..712678) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 712678 7942634 RPR_04195 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916579.1 711584 R 562019 CDS YP_002916580.1 238650727 7942635 complement(715044..716582) 1 NC_012730.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 716582 7942635 RPR_04210 Rickettsia peacockii str. Rustic putative monovalent cation/H+ antiporter subunit D YP_002916580.1 715044 R 562019 CDS YP_002916581.1 238650728 7942636 complement(716584..716988) 1 NC_012730.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain; Toxin of toxin-antitoxin system VapC 716988 7942636 RPR_04215 Rickettsia peacockii str. Rustic Toxin of toxin-antitoxin system VapC YP_002916581.1 716584 R 562019 CDS YP_002916582.1 238650729 7942637 complement(716979..717266) 1 NC_012730.1 Antitoxin of toxin-antitoxin (TA) system VapB 717266 7942637 RPR_04220 Rickettsia peacockii str. Rustic Antitoxin of toxin-antitoxin (TA) system VapB YP_002916582.1 716979 R 562019 CDS YP_002916583.1 238650730 7942638 complement(717453..718916) 1 NC_012730.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 718916 7942638 RPR_04225 Rickettsia peacockii str. Rustic putative monovalent cation/H+ antiporter subunit D YP_002916583.1 717453 R 562019 CDS YP_002916584.1 238650731 7942639 complement(719062..720177) 1 NC_012730.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 720177 7942639 RPR_04230 Rickettsia peacockii str. Rustic putative monovalent cation/H+ antiporter subunit D YP_002916584.1 719062 R 562019 CDS YP_002916585.1 238650732 7942640 complement(720360..720695) 1 NC_012730.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 720695 7942640 RPR_04235 Rickettsia peacockii str. Rustic putative monovalent cation/H+ antiporter subunit C YP_002916585.1 720360 R 562019 CDS YP_002916586.1 238650733 7942641 complement(720774..721526) 1 NC_012730.1 COG3504 Type IV secretory pathway, VirB9 components; conjugal transfer protein trbG precursor, virB9a 721526 7942641 RPR_04240 Rickettsia peacockii str. Rustic conjugal transfer protein trbG precursor, virB9a YP_002916586.1 720774 R 562019 CDS YP_002916587.1 238650734 7942642 complement(721528..722226) 1 NC_012730.1 COG3736 Type IV secretory pathway, component VirB8; virB8a protein 722226 7942642 RPR_04245 Rickettsia peacockii str. Rustic virB8a protein YP_002916587.1 721528 R 562019 CDS YP_002916588.1 238650735 7942643 722691..722870 1 NC_012730.1 virB7 protein 722870 7942643 RPR_04250 Rickettsia peacockii str. Rustic virB7 protein YP_002916588.1 722691 D 562019 CDS YP_002916589.1 238650736 7942644 722920..723651 1 NC_012730.1 COG3736 Type IV secretory pathway, component VirB8; virB8b protein 723651 7942644 RPR_04255 Rickettsia peacockii str. Rustic virB8b protein YP_002916589.1 722920 D 562019 CDS YP_002916590.1 238650737 7942645 723638..724111 1 NC_012730.1 COG3504 Type IV secretory pathway, VirB9 components; virB9b protein 724111 7942645 RPR_04260 Rickettsia peacockii str. Rustic virB9b protein YP_002916590.1 723638 D 562019 CDS YP_002916591.1 238650738 7942646 724295..725743 1 NC_012730.1 COG2948 Type IV secretory pathway, VirB10 components; virB10 protein 725743 7942646 RPR_04265 Rickettsia peacockii str. Rustic virB10 protein YP_002916591.1 724295 D 562019 CDS YP_002916592.1 238650739 7942647 725740..726744 1 NC_012730.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; type IV secretion system ATPase VirB11 726744 7942647 RPR_04270 Rickettsia peacockii str. Rustic type IV secretion system ATPase VirB11 YP_002916592.1 725740 D 562019 CDS YP_002916593.1 238650740 7942648 726899..728674 1 NC_012730.1 COG3505 Type IV secretory pathway, VirD4 components; type IV secretion system component VirD4 728674 7942648 RPR_04275 Rickettsia peacockii str. Rustic type IV secretion system component VirD4 YP_002916593.1 726899 D 562019 CDS YP_002916594.1 238650741 7942649 728667..730088 1 NC_012730.1 COG0248 Exopolyphosphatase; exopolyphosphatase 730088 7942649 RPR_04280 Rickettsia peacockii str. Rustic exopolyphosphatase YP_002916594.1 728667 D 562019 CDS YP_002916595.1 238650742 7942650 complement(732492..732776) 1 NC_012730.1 phage host specificity protein 732776 7942650 RPR_04315 Rickettsia peacockii str. Rustic phage host specificity protein YP_002916595.1 732492 R 562019 CDS YP_002916596.1 238650743 7942651 733018..733902 1 NC_012730.1 hypothetical protein 733902 7942651 RPR_04320 Rickettsia peacockii str. Rustic hypothetical protein YP_002916596.1 733018 D 562019 CDS YP_002916597.1 238650744 7942652 733886..734710 1 NC_012730.1 hypothetical protein 734710 7942652 RPR_04325 Rickettsia peacockii str. Rustic hypothetical protein YP_002916597.1 733886 D 562019 CDS YP_002916598.1 238650745 7942653 734713..735489 1 NC_012730.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; 3'(2'),5'-bisphosphate nucleotidase 735489 7942653 RPR_04330 Rickettsia peacockii str. Rustic 3'(2'),5'-bisphosphate nucleotidase YP_002916598.1 734713 D 562019 CDS YP_002916599.1 238650746 7942654 complement(735629..738301) 1 NC_012730.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 738301 7942654 RPR_04335 Rickettsia peacockii str. Rustic DNA mismatch repair protein MutS YP_002916599.1 735629 R 562019 CDS YP_002916600.1 238650747 7942655 complement(738472..738906) 1 NC_012730.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 738906 7942655 RPR_04340 Rickettsia peacockii str. Rustic ribose-5-phosphate isomerase B YP_002916600.1 738472 R 562019 CDS YP_002916601.1 238650748 7942799 738994..739632 1 NC_012730.1 COG0739 Membrane proteins related to metalloendopeptidases; peptidoglycan-specific endopeptidase, M23 family protein 739632 7942799 RPR_04345 Rickettsia peacockii str. Rustic peptidoglycan-specific endopeptidase, M23 family protein YP_002916601.1 738994 D 562019 CDS YP_002916602.1 238650749 7942247 739633..740325 1 NC_012730.1 COG1451 Predicted metal-dependent hydrolase; zinc metalloprotease 740325 7942247 RPR_04350 Rickettsia peacockii str. Rustic zinc metalloprotease YP_002916602.1 739633 D 562019 CDS YP_002916603.1 238650750 7942717 740434..741318 1 NC_012730.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 741318 thyX 7942717 thyX Rickettsia peacockii str. Rustic FAD-dependent thymidylate synthase YP_002916603.1 740434 D 562019 CDS YP_002916604.1 238650751 7942718 741393..742727 1 NC_012730.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 742727 tolB 7942718 tolB Rickettsia peacockii str. Rustic translocation protein TolB YP_002916604.1 741393 D 562019 CDS YP_002916605.1 238650752 7942719 complement(742865..743746) 1 NC_012730.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 743746 7942719 RPR_04365 Rickettsia peacockii str. Rustic RNA polymerase factor sigma-32 YP_002916605.1 742865 R 562019 CDS YP_002916606.1 238650753 7942720 743835..744401 1 NC_012730.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 744401 7942720 RPR_04370 Rickettsia peacockii str. Rustic cytochrome C oxidase assembly protein YP_002916606.1 743835 D 562019 CDS YP_002916607.1 238650754 7942721 complement(744499..745479) 1 NC_012730.1 COG0457 FOG: TPR repeat; hypothetical protein 745479 7942721 RPR_04375 Rickettsia peacockii str. Rustic hypothetical protein YP_002916607.1 744499 R 562019 CDS YP_002916608.1 238651140 7942157 complement(745659..746639) 1 NC_012730.1 COG0457 FOG: TPR repeat; hypothetical protein 746639 7942157 RPR_04376 Rickettsia peacockii str. Rustic hypothetical protein YP_002916608.1 745659 R 562019 CDS YP_002916609.1 238650755 7942722 746901..747998 1 NC_012730.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 747998 mnmA 7942722 mnmA Rickettsia peacockii str. Rustic tRNA-specific 2-thiouridylase MnmA YP_002916609.1 746901 D 562019 CDS YP_002916610.1 238650756 7942723 748129..749526 1 NC_012730.1 COG0531 Amino acid transporters; cationic amino acid transporter-1 749526 7942723 RPR_04385 Rickettsia peacockii str. Rustic cationic amino acid transporter-1 YP_002916610.1 748129 D 562019 CDS YP_002916611.1 238650757 7942724 749676..750920 1 NC_012730.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 750920 hisS 7942724 hisS Rickettsia peacockii str. Rustic histidyl-tRNA synthetase YP_002916611.1 749676 D 562019 CDS YP_002916612.1 238650758 7942725 755783..756508 1 NC_012730.1 COG0811 Biopolymer transport proteins; tolQ protein 756508 7942725 RPR_04435 Rickettsia peacockii str. Rustic tolQ protein YP_002916612.1 755783 D 562019 CDS YP_002916613.1 238650759 7942726 756508..756939 1 NC_012730.1 COG0848 Biopolymer transport protein; tolR protein 756939 7942726 RPR_04440 Rickettsia peacockii str. Rustic tolR protein YP_002916613.1 756508 D 562019 CDS YP_002916614.1 238651139 7942727 756929..757900 1 NC_012730.1 COG0810 Periplasmic protein TonB, links inner and outer membranes; tonB/tolA protein 757900 7942727 RPR_04445 Rickettsia peacockii str. Rustic tonB/tolA protein YP_002916614.1 756929 D 562019 CDS YP_002916615.1 238650760 7942161 758888..759595 1 NC_012730.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; hypothetical protein 759595 7942161 RPR_04450 Rickettsia peacockii str. Rustic hypothetical protein YP_002916615.1 758888 D 562019 CDS YP_002916616.1 238650761 7942728 complement(759546..760862) 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter 760862 7942728 RPR_04455 Rickettsia peacockii str. Rustic proline/betaine transporter YP_002916616.1 759546 R 562019 CDS YP_002916617.1 238650762 7942729 complement(761001..762536) 1 NC_012730.1 COG0845 Membrane-fusion protein; type I secretion adaptor protein 762536 7942729 RPR_04460 Rickettsia peacockii str. Rustic type I secretion adaptor protein YP_002916617.1 761001 R 562019 CDS YP_002916618.1 238650763 7942730 complement(762721..764475) 1 NC_012730.1 COG4618 ABC-type protease/lipase transport system, ATPase and permease components; type I protein secretion ATP-binding protein 764475 7942730 RPR_04465 Rickettsia peacockii str. Rustic type I protein secretion ATP-binding protein YP_002916618.1 762721 R 562019 CDS YP_002916619.1 238650764 7942731 complement(764486..765502) 1 NC_012730.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 765502 7942731 RPR_04470 Rickettsia peacockii str. Rustic aspartate-semialdehyde dehydrogenase YP_002916619.1 764486 R 562019 CDS YP_002916620.1 238650765 7942732 complement(765495..765854) 1 NC_012730.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; hypothetical protein 765854 7942732 RPR_04475 Rickettsia peacockii str. Rustic hypothetical protein YP_002916620.1 765495 R 562019 CDS YP_002916621.1 238650766 7942733 complement(766044..766394) 1 NC_012730.1 hypothetical protein 766394 7942733 RPR_04480 Rickettsia peacockii str. Rustic hypothetical protein YP_002916621.1 766044 R 562019 CDS YP_002916622.1 238650767 7942734 766668..767216 1 NC_012730.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 767216 7942734 RPR_04485 Rickettsia peacockii str. Rustic ATP-dependent protease peptidase subunit YP_002916622.1 766668 D 562019 CDS YP_002916623.1 238650768 7942735 767213..768565 1 NC_012730.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 768565 hslU 7942735 hslU Rickettsia peacockii str. Rustic ATP-dependent protease ATP-binding subunit HslU YP_002916623.1 767213 D 562019 CDS YP_002916624.1 238650769 7942736 770711..771289 1 NC_012730.1 hypothetical protein 771289 7942736 RPR_04520 Rickettsia peacockii str. Rustic hypothetical protein YP_002916624.1 770711 D 562019 CDS YP_002916625.1 238650770 7942737 771299..772639 1 NC_012730.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 772639 lpxB 7942737 lpxB Rickettsia peacockii str. Rustic lipid-A-disaccharide synthase YP_002916625.1 771299 D 562019 CDS YP_002916626.1 238650771 7942738 complement(772636..772908) 1 NC_012730.1 hypothetical protein 772908 7942738 RPR_04530 Rickettsia peacockii str. Rustic hypothetical protein YP_002916626.1 772636 R 562019 CDS YP_002916627.1 238650772 7942739 773256..774275 1 NC_012730.1 COG1559 Predicted periplasmic solute-binding protein; hypothetical protein 774275 7942739 RPR_04535 Rickettsia peacockii str. Rustic hypothetical protein YP_002916627.1 773256 D 562019 CDS YP_002916628.1 238650773 7942740 774415..774726 1 NC_012730.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 774726 cyaY 7942740 cyaY Rickettsia peacockii str. Rustic frataxin-like protein YP_002916628.1 774415 D 562019 CDS YP_002916629.1 238650774 7942741 775843..776319 1 NC_012730.1 hypothetical protein 776319 7942741 RPR_04555 Rickettsia peacockii str. Rustic hypothetical protein YP_002916629.1 775843 D 562019 CDS YP_002916630.1 238650775 7942743 complement(778916..779908) 1 NC_012730.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 779908 7942743 RPR_04575 Rickettsia peacockii str. Rustic tryptophanyl-tRNA synthetase YP_002916630.1 778916 R 562019 CDS YP_002916631.1 238650776 7942744 780136..780711 1 NC_012730.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 780711 7942744 RPR_04580 Rickettsia peacockii str. Rustic 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_002916631.1 780136 D 562019 CDS YP_002916632.1 238650777 7942745 780776..781216 1 NC_012730.1 COG5622 Protein required for attachment to host cells; hypothetical protein 781216 7942745 RPR_04585 Rickettsia peacockii str. Rustic hypothetical protein YP_002916632.1 780776 D 562019 CDS YP_002916633.1 238650778 7942746 781453..782172 1 NC_012730.1 COG2945 Predicted hydrolase of the alpha/beta superfamily; hypothetical protein 782172 7942746 RPR_04590 Rickettsia peacockii str. Rustic hypothetical protein YP_002916633.1 781453 D 562019 CDS YP_002916634.1 238650779 7942747 complement(782364..783368) 1 NC_012730.1 COG2956 Predicted N-acetylglucosaminyl transferase; hypothetical protein 783368 7942747 RPR_04595 Rickettsia peacockii str. Rustic hypothetical protein YP_002916634.1 782364 R 562019 CDS YP_002916635.1 238650780 7942748 complement(783361..784116) 1 NC_012730.1 hypothetical protein 784116 7942748 RPR_04600 Rickettsia peacockii str. Rustic hypothetical protein YP_002916635.1 783361 R 562019 CDS YP_002916636.1 238650781 7942749 complement(784100..784774) 1 NC_012730.1 COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 784774 7942749 RPR_04605 Rickettsia peacockii str. Rustic uroporphyrinogen-III synthase YP_002916636.1 784100 R 562019 CDS YP_002916637.1 238650782 7942750 complement(784752..785393) 1 NC_012730.1 COG1279 Lysine efflux permease; lysine efflux permease 785393 7942750 RPR_04610 Rickettsia peacockii str. Rustic lysine efflux permease YP_002916637.1 784752 R 562019 CDS YP_002916638.1 238650783 7942751 complement(785988..787373) 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; AmpG 787373 7942751 RPR_04620 Rickettsia peacockii str. Rustic AmpG YP_002916638.1 785988 R 562019 CDS YP_002916639.1 238650784 7942752 788435..789940 1 NC_012730.1 COG3202 ATP/ADP translocase; ADP,ATP carrier protein 789940 7942752 RPR_04640 Rickettsia peacockii str. Rustic ADP,ATP carrier protein YP_002916639.1 788435 D 562019 CDS YP_002916640.1 238650785 7942753 790136..791794 1 NC_012730.1 hypothetical protein 791794 7942753 RPR_04645 Rickettsia peacockii str. Rustic hypothetical protein YP_002916640.1 790136 D 562019 CDS YP_002916641.1 238650786 7942754 791781..792896 1 NC_012730.1 COG0142 Geranylgeranyl pyrophosphate synthase; octaprenyl-diphosphate synthase 792896 7942754 RPR_04650 Rickettsia peacockii str. Rustic octaprenyl-diphosphate synthase YP_002916641.1 791781 D 562019 CDS YP_002916642.1 238650787 7942757 complement(793211..795058) 1 NC_012730.1 COG0006 Xaa-Pro aminopeptidase; putative aminopeptidase 795058 7942757 RPR_04655 Rickettsia peacockii str. Rustic putative aminopeptidase YP_002916642.1 793211 R 562019 CDS YP_002916643.1 238650788 7942758 complement(795200..796483) 1 NC_012730.1 COG0531 Amino acid transporters; amino acid permease 796483 7942758 RPR_04660 Rickettsia peacockii str. Rustic amino acid permease YP_002916643.1 795200 R 562019 CDS YP_002916644.1 238650789 7942759 complement(797336..797668) 1 NC_012730.1 COG0316 Uncharacterized conserved protein; HesB protein family protein 797668 7942759 RPR_04670 Rickettsia peacockii str. Rustic HesB protein family protein YP_002916644.1 797336 R 562019 CDS YP_002916645.1 238650790 7942760 complement(797672..798067) 1 NC_012730.1 COG0822 NifU homolog involved in Fe-S cluster formation; scaffold protein 798067 7942760 RPR_04675 Rickettsia peacockii str. Rustic scaffold protein YP_002916645.1 797672 R 562019 CDS YP_002916646.1 238650791 7942761 complement(798219..799451) 1 NC_012730.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 799451 7942761 RPR_04680 Rickettsia peacockii str. Rustic cysteine desulfurase YP_002916646.1 798219 R 562019 CDS YP_002916647.1 238650792 7942762 complement(799554..800672) 1 NC_012730.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; NifS protein 800672 7942762 RPR_04685 Rickettsia peacockii str. Rustic NifS protein YP_002916647.1 799554 R 562019 CDS YP_002916648.1 238650793 7942763 complement(800669..801088) 1 NC_012730.1 COG1959 Predicted transcriptional regulator; Rrf2 family protein 801088 7942763 RPR_04690 Rickettsia peacockii str. Rustic Rrf2 family protein YP_002916648.1 800669 R 562019 CDS YP_002916649.1 238650794 7942764 complement(803076..803948) 1 NC_012730.1 hypothetical protein 803948 7942764 RPR_04710 Rickettsia peacockii str. Rustic hypothetical protein YP_002916649.1 803076 R 562019 CDS YP_002916650.1 238650795 7942765 804399..804848 1 NC_012730.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; putative histone and other protein acetyltransferase 804848 7942765 RPR_04715 Rickettsia peacockii str. Rustic putative histone and other protein acetyltransferase YP_002916650.1 804399 D 562019 CDS YP_002916651.1 238650796 7942766 805464..806558 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 806558 7942766 RPR_04730 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916651.1 805464 D 562019 CDS YP_002916652.1 238650797 7942767 complement(814640..818185) 1 NC_012730.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 818185 dnaE 7942767 dnaE Rickettsia peacockii str. Rustic DNA polymerase III subunit alpha YP_002916652.1 814640 R 562019 CDS YP_002916653.1 238650798 7942768 complement(818343..819641) 1 NC_012730.1 COG1004 Predicted UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 819641 7942768 RPR_04805 Rickettsia peacockii str. Rustic UDP-glucose 6-dehydrogenase YP_002916653.1 818343 R 562019 CDS YP_002916654.1 238650799 7942769 819889..822399 1 NC_012730.1 hypothetical protein 822399 7942769 RPR_04810 Rickettsia peacockii str. Rustic hypothetical protein YP_002916654.1 819889 D 562019 CDS YP_002916655.1 238650800 7942770 822537..824078 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; AmpG 824078 7942770 RPR_04815 Rickettsia peacockii str. Rustic AmpG YP_002916655.1 822537 D 562019 CDS YP_002916656.1 238650801 7942771 824145..824900 1 NC_012730.1 COG0805 Sec-independent protein secretion pathway component TatC; Sec-independent protein translocase protein 824900 7942771 RPR_04820 Rickettsia peacockii str. Rustic Sec-independent protein translocase protein YP_002916656.1 824145 D 562019 CDS YP_002916657.1 238650802 7942772 824878..826155 1 NC_012730.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 826155 7942772 RPR_04825 Rickettsia peacockii str. Rustic seryl-tRNA synthetase YP_002916657.1 824878 D 562019 CDS YP_002916658.1 238650803 7942773 826493..828925 1 NC_012730.1 COG3451 Type IV secretory pathway, VirB4 components; virB4b ATPase 828925 7942773 RPR_04830 Rickettsia peacockii str. Rustic virB4b ATPase YP_002916658.1 826493 D 562019 CDS YP_002916659.1 238650804 7942774 829061..832549 1 NC_012730.1 hypothetical protein 832549 7942774 RPR_04835 Rickettsia peacockii str. Rustic hypothetical protein YP_002916659.1 829061 D 562019 CDS YP_002916660.1 238650805 7942775 832554..833459 1 NC_012730.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance; tellurium resistance protein TerC 833459 7942775 RPR_04840 Rickettsia peacockii str. Rustic tellurium resistance protein TerC YP_002916660.1 832554 D 562019 CDS YP_002916661.1 238650806 7942776 833503..834246 1 NC_012730.1 COG3637 Opacity protein and related surface antigens; hypothetical protein 834246 7942776 RPR_04845 Rickettsia peacockii str. Rustic hypothetical protein YP_002916661.1 833503 D 562019 CDS YP_002916662.1 238650807 7942777 834301..835965 1 NC_012730.1 COG0500 SAM-dependent methyltransferases; hypothetical protein 835965 7942777 RPR_04850 Rickettsia peacockii str. Rustic hypothetical protein YP_002916662.1 834301 D 562019 CDS YP_002916663.1 238650808 7942778 836008..836229 1 NC_012730.1 hypothetical protein 836229 7942778 RPR_04855 Rickettsia peacockii str. Rustic hypothetical protein YP_002916663.1 836008 D 562019 CDS YP_002916664.1 238650809 7942779 836302..836730 1 NC_012730.1 COG2944 Predicted transcriptional regulator; hypothetical protein 836730 7942779 RPR_04860 Rickettsia peacockii str. Rustic hypothetical protein YP_002916664.1 836302 D 562019 CDS YP_002916665.1 238650810 7942780 836763..837380 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 837380 7942780 RPR_04865 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit J YP_002916665.1 836763 D 562019 CDS YP_002916666.1 238650811 7942781 837373..837687 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 837687 7942781 RPR_04870 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit K YP_002916666.1 837373 D 562019 CDS YP_002916667.1 238650812 7942782 837720..839660 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 839660 7942782 RPR_04875 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit L YP_002916667.1 837720 D 562019 CDS YP_002916668.1 238650813 7942783 839814..841295 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 841295 7942783 RPR_04880 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit M YP_002916668.1 839814 D 562019 CDS YP_002916669.1 238650814 7942784 841581..842285 1 NC_012730.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 842285 7942784 RPR_04885 Rickettsia peacockii str. Rustic cytochrome c biogenesis protein CcmA YP_002916669.1 841581 D 562019 CDS YP_002916670.1 238650815 7942785 complement(842770..843249) 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 843249 7942785 RPR_04890 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit I YP_002916670.1 842770 R 562019 CDS YP_002916671.1 238650816 7942786 complement(843436..844455) 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 844455 7942786 RPR_04895 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit H YP_002916671.1 843436 R 562019 CDS YP_002916672.1 238650817 7942787 complement(844577..846607) 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 846607 7942787 RPR_04900 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit G YP_002916672.1 844577 R 562019 CDS YP_002916673.1 238650818 7942788 complement(846595..846951) 1 NC_012730.1 COG3671 Predicted membrane protein; hypothetical protein 846951 7942788 RPR_04905 Rickettsia peacockii str. Rustic hypothetical protein YP_002916673.1 846595 R 562019 CDS YP_002916674.1 238650819 7942789 complement(847120..849756) 1 NC_012730.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 849756 7942789 RPR_04910 Rickettsia peacockii str. Rustic aconitate hydratase YP_002916674.1 847120 R 562019 CDS YP_002916675.1 238650820 7942790 complement(849938..850276) 1 NC_012730.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 850276 atpC 7942790 atpC Rickettsia peacockii str. Rustic F0F1 ATP synthase subunit epsilon YP_002916675.1 849938 R 562019 CDS YP_002916676.1 238650821 7942791 complement(850334..851755) 1 NC_012730.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 851755 7942791 RPR_04920 Rickettsia peacockii str. Rustic F0F1 ATP synthase subunit beta YP_002916676.1 850334 R 562019 CDS YP_002916677.1 238650822 7942792 complement(851928..852899) 1 NC_012730.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 852899 7942792 RPR_04925 Rickettsia peacockii str. Rustic F0F1 ATP synthase subunit gamma YP_002916677.1 851928 R 562019 CDS YP_002916678.1 238650823 7942793 complement(853032..854564) 1 NC_012730.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 854564 7942793 RPR_04930 Rickettsia peacockii str. Rustic F0F1 ATP synthase subunit alpha YP_002916678.1 853032 R 562019 CDS YP_002916679.1 238650824 7942794 complement(854730..855284) 1 NC_012730.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 855284 7942794 RPR_04935 Rickettsia peacockii str. Rustic F0F1 ATP synthase subunit delta YP_002916679.1 854730 R 562019 CDS YP_002916680.1 238650825 7942795 complement(855446..856825) 1 NC_012730.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 856825 7942795 RPR_04940 Rickettsia peacockii str. Rustic dihydrolipoamide dehydrogenase YP_002916680.1 855446 R 562019 CDS YP_002916681.1 238650826 7942796 complement(856980..857408) 1 NC_012730.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); ferroxidase 857408 7942796 RPR_04945 Rickettsia peacockii str. Rustic ferroxidase YP_002916681.1 856980 R 562019 CDS YP_002916682.1 238650827 7942797 complement(859829..861166) 1 NC_012730.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 861166 tig 7942797 tig Rickettsia peacockii str. Rustic trigger factor YP_002916682.1 859829 R 562019 CDS YP_002916683.1 238650828 7942165 complement(862457..863701) 1 NC_012730.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 863701 7942165 RPR_04980 Rickettsia peacockii str. Rustic 5-aminolevulinate synthase YP_002916683.1 862457 R 562019 CDS YP_002916684.1 238650829 7942166 complement(863880..865745) 1 NC_012730.1 molecular chaperone; heat shock protein 90 865745 7942166 RPR_04985 Rickettsia peacockii str. Rustic heat shock protein 90 YP_002916684.1 863880 R 562019 CDS YP_002916685.1 238650830 7942167 complement(865889..866206) 1 NC_012730.1 COG1872 Uncharacterized conserved protein; hypothetical protein 866206 7942167 RPR_04990 Rickettsia peacockii str. Rustic hypothetical protein YP_002916685.1 865889 R 562019 CDS YP_002916686.1 238650831 7942169 complement(867882..868709) 1 NC_012730.1 hypothetical protein 868709 7942169 RPR_05010 Rickettsia peacockii str. Rustic hypothetical protein YP_002916686.1 867882 R 562019 CDS YP_002916687.1 238650832 7942170 complement(868721..869179) 1 NC_012730.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 869179 7942170 RPR_05015 Rickettsia peacockii str. Rustic single-stranded DNA-binding protein YP_002916687.1 868721 R 562019 CDS YP_002916688.1 238650833 7942171 869288..872149 1 NC_012730.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 872149 uvrA 7942171 uvrA Rickettsia peacockii str. Rustic excinuclease ABC subunit A YP_002916688.1 869288 D 562019 CDS YP_002916689.1 238650834 7942172 complement(874366..875067) 1 NC_012730.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component; zinc ABC transporter ATP-binding protein 875067 7942172 RPR_05055 Rickettsia peacockii str. Rustic zinc ABC transporter ATP-binding protein YP_002916689.1 874366 R 562019 CDS YP_002916690.1 238650835 7942173 complement(875207..875671) 1 NC_012730.1 COG1881 Phospholipid-binding protein; phosphatidylethanolamine-binding protein PEBP 875671 7942173 RPR_05060 Rickettsia peacockii str. Rustic phosphatidylethanolamine-binding protein PEBP YP_002916690.1 875207 R 562019 CDS YP_002916691.1 238650836 7942174 complement(875802..876281) 1 NC_012730.1 COG4520 Surface antigen; 17 kDa common-antigen 876281 7942174 RPR_05065 Rickettsia peacockii str. Rustic 17 kDa common-antigen YP_002916691.1 875802 R 562019 CDS YP_002916692.1 238650837 7942175 876483..877388 1 NC_012730.1 COG0053 Predicted Co/Zn/Cd cation transporters; CzcD 877388 7942175 RPR_05070 Rickettsia peacockii str. Rustic CzcD YP_002916692.1 876483 D 562019 CDS YP_002916693.1 238650838 7942176 877369..877875 1 NC_012730.1 COG0590 Cytosine/adenosine deaminases; tRNA-specific adenosine deaminase 877875 7942176 RPR_05075 Rickettsia peacockii str. Rustic tRNA-specific adenosine deaminase YP_002916693.1 877369 D 562019 CDS YP_002916694.1 238650839 7942177 877890..878582 1 NC_012730.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component; heme chaperone heme-lyase 878582 7942177 RPR_05080 Rickettsia peacockii str. Rustic heme chaperone heme-lyase YP_002916694.1 877890 D 562019 CDS YP_002916695.1 238650840 7942178 878587..878913 1 NC_012730.1 COG1146 Ferredoxin; ferredoxin 878913 7942178 RPR_05085 Rickettsia peacockii str. Rustic ferredoxin YP_002916695.1 878587 D 562019 CDS YP_002916696.1 238650841 7942179 879237..879911 1 NC_012730.1 COG3637 Opacity protein and related surface antigens; hypothetical protein 879911 7942179 RPR_05090 Rickettsia peacockii str. Rustic hypothetical protein YP_002916696.1 879237 D 562019 CDS YP_002916697.1 238650842 7942180 880158..880895 1 NC_012730.1 COG3637 Opacity protein and related surface antigens; hypothetical protein 880895 7942180 RPR_05095 Rickettsia peacockii str. Rustic hypothetical protein YP_002916697.1 880158 D 562019 CDS YP_002916698.1 238650843 7942181 complement(881389..881712) 1 NC_012730.1 hypothetical protein 881712 7942181 RPR_05100 Rickettsia peacockii str. Rustic hypothetical protein YP_002916698.1 881389 R 562019 CDS YP_002916699.1 238650844 7942182 complement(881709..882692) 1 NC_012730.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; UDP-phosphate alpha-N-acetylglucosaminyltransferase 882692 7942182 RPR_05105 Rickettsia peacockii str. Rustic UDP-phosphate alpha-N-acetylglucosaminyltransferase YP_002916699.1 881709 R 562019 CDS YP_002916700.1 238650845 7942183 complement(883609..884388) 1 NC_012730.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 884388 7942183 RPR_05125 Rickettsia peacockii str. Rustic methionine aminopeptidase YP_002916700.1 883609 R 562019 CDS YP_002916701.1 238650846 7942184 885595..887829 1 NC_012730.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; cell division protein 887829 7942184 RPR_05135 Rickettsia peacockii str. Rustic cell division protein YP_002916701.1 885595 D 562019 CDS YP_002916702.1 238650847 7942185 893135..894709 1 NC_012730.1 COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase 894709 7942185 RPR_05175 Rickettsia peacockii str. Rustic peptidyl-prolyl cis-trans isomerase YP_002916702.1 893135 D 562019 CDS YP_002916703.1 238650848 7942186 894862..896340 1 NC_012730.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-polyprenyl-4-hydroxybenzoate decarboxylase 896340 7942186 RPR_05180 Rickettsia peacockii str. Rustic 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_002916703.1 894862 D 562019 CDS YP_002916704.1 238650849 7942187 897063..897665 1 NC_012730.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; phospholipase D superfamily protein PLD 897665 7942187 RPR_05195 Rickettsia peacockii str. Rustic phospholipase D superfamily protein PLD YP_002916704.1 897063 D 562019 CDS YP_002916705.1 238650850 7942188 898176..899093 1 NC_012730.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 899093 xerC 7942188 xerC Rickettsia peacockii str. Rustic site-specific tyrosine recombinase XerC YP_002916705.1 898176 D 562019 CDS YP_002916706.1 238650851 7942189 899196..899627 1 NC_012730.1 COG1734 DnaK suppressor protein; dnaK suppressor protein 899627 7942189 RPR_05210 Rickettsia peacockii str. Rustic dnaK suppressor protein YP_002916706.1 899196 D 562019 CDS YP_002916707.1 238650852 7942190 complement(899761..900408) 1 NC_012730.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 900408 7942190 RPR_05215 Rickettsia peacockii str. Rustic Maf-like protein YP_002916707.1 899761 R 562019 CDS YP_002916708.1 238650853 7942191 complement(900420..900635) 1 NC_012730.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 900635 infA 7942191 infA Rickettsia peacockii str. Rustic translation initiation factor IF-1 YP_002916708.1 900420 R 562019 CDS YP_002916709.1 238650854 7942193 complement(908297..908536) 1 NC_012730.1 COG0271 Stress-induced morphogen (activity unknown); BolA 908536 7942193 RPR_05290 Rickettsia peacockii str. Rustic BolA YP_002916709.1 908297 R 562019 CDS YP_002916710.1 238650855 7942194 908692..909018 1 NC_012730.1 COG0799 Uncharacterized homolog of plant Iojap protein; iojap superfamily protein 909018 7942194 RPR_05295 Rickettsia peacockii str. Rustic iojap superfamily protein YP_002916710.1 908692 D 562019 CDS YP_002916711.1 238650856 7942195 909015..910742 1 NC_012730.1 COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein 910742 7942195 RPR_05300 Rickettsia peacockii str. Rustic glutathione-regulated potassium-efflux system protein YP_002916711.1 909015 D 562019 CDS YP_002916712.1 238650857 7942196 910735..911214 1 NC_012730.1 COG3807 Uncharacterized protein conserved in bacteria; hypothetical protein 911214 7942196 RPR_05305 Rickettsia peacockii str. Rustic hypothetical protein YP_002916712.1 910735 D 562019 CDS YP_002916713.1 238650858 7942197 complement(911338..912432) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 912432 7942197 RPR_05310 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916713.1 911338 R 562019 CDS YP_002916714.1 238650859 7942198 complement(912723..913778) 1 NC_012730.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 913778 hemC 7942198 hemC Rickettsia peacockii str. Rustic porphobilinogen deaminase YP_002916714.1 912723 R 562019 CDS YP_002916715.1 238650860 7942199 complement(913775..914764) 1 NC_012730.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF; microcin C7 self-immunity protein 914764 7942199 RPR_05320 Rickettsia peacockii str. Rustic microcin C7 self-immunity protein YP_002916715.1 913775 R 562019 CDS YP_002916716.1 238650861 7942200 complement(918583..918921) 1 NC_012730.1 hypothetical protein 918921 7942200 RPR_05355 Rickettsia peacockii str. Rustic hypothetical protein YP_002916716.1 918583 R 562019 CDS YP_002916717.1 238650862 7942201 complement(919250..920257) 1 NC_012730.1 COG0354 Predicted aminomethyltransferase related to GcvT; hypothetical protein 920257 7942201 RPR_05365 Rickettsia peacockii str. Rustic hypothetical protein YP_002916717.1 919250 R 562019 CDS YP_002916718.1 238650863 7942202 920370..921161 1 NC_012730.1 COG1723 Uncharacterized conserved protein; hypothetical protein 921161 7942202 RPR_05370 Rickettsia peacockii str. Rustic hypothetical protein YP_002916718.1 920370 D 562019 CDS YP_002916719.1 238650864 7942203 921171..922016 1 NC_012730.1 COG0349 Ribonuclease D; ribonuclease D 922016 7942203 RPR_05375 Rickettsia peacockii str. Rustic ribonuclease D YP_002916719.1 921171 D 562019 CDS YP_002916720.1 238650865 7942204 complement(922086..922295) 1 NC_012730.1 hypothetical protein 922295 7942204 RPR_05380 Rickettsia peacockii str. Rustic hypothetical protein YP_002916720.1 922086 R 562019 CDS YP_002916721.1 238650866 7942205 complement(922392..922913) 1 NC_012730.1 COG0212 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 922913 7942205 RPR_05385 Rickettsia peacockii str. Rustic 5-formyltetrahydrofolate cyclo-ligase YP_002916721.1 922392 R 562019 CDS YP_002916722.1 238650867 7942206 complement(923205..924584) 1 NC_012730.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 924584 7942206 RPR_05390 Rickettsia peacockii str. Rustic dihydrolipoamide dehydrogenase YP_002916722.1 923205 R 562019 CDS YP_002916723.1 238650868 7942207 complement(924737..925417) 1 NC_012730.1 COG0500 SAM-dependent methyltransferases; biotin synthesis protein BioC 925417 7942207 RPR_05395 Rickettsia peacockii str. Rustic biotin synthesis protein BioC YP_002916723.1 924737 R 562019 CDS YP_002916724.1 238650869 7942208 complement(925488..925943) 1 NC_012730.1 hypothetical protein 925943 7942208 RPR_05400 Rickettsia peacockii str. Rustic hypothetical protein YP_002916724.1 925488 R 562019 CDS YP_002916725.1 238650870 7942209 932501..933838 1 NC_012730.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 933838 7942209 RPR_05480 Rickettsia peacockii str. Rustic (dimethylallyl)adenosine tRNA methylthiotransferase YP_002916725.1 932501 D 562019 CDS YP_002916726.1 238650871 7942210 933842..936214 1 NC_012730.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein; multimodular transpeptidase-transglycosylase PBP 1A 936214 7942210 RPR_05485 Rickettsia peacockii str. Rustic multimodular transpeptidase-transglycosylase PBP 1A YP_002916726.1 933842 D 562019 CDS YP_002916727.1 238650872 7942211 936610..937704 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 937704 7942211 RPR_05495 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916727.1 936610 D 562019 CDS YP_002916728.1 238650873 7942213 complement(938095..938841) 1 NC_012730.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); UDP-N-acetylglucosamine pyrophosphorylase 938841 7942213 RPR_05500 Rickettsia peacockii str. Rustic UDP-N-acetylglucosamine pyrophosphorylase YP_002916728.1 938095 R 562019 CDS YP_002916729.1 238650874 7942214 complement(938838..939599) 1 NC_012730.1 COG0217 Uncharacterized conserved protein; hypothetical protein 939599 7942214 RPR_05505 Rickettsia peacockii str. Rustic hypothetical protein YP_002916729.1 938838 R 562019 CDS YP_002916730.1 238651136 7942215 complement(939808..939933) 1 NC_012730.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 939933 rpmJ 7942215 rpmJ Rickettsia peacockii str. Rustic 50S ribosomal protein L36 YP_002916730.1 939808 R 562019 CDS YP_002916731.1 238650875 7942162 940243..940425 1 NC_012730.1 hypothetical protein 940425 7942162 RPR_05515 Rickettsia peacockii str. Rustic hypothetical protein YP_002916731.1 940243 D 562019 CDS YP_002916732.1 238650876 7942216 940887..941339 1 NC_012730.1 hypothetical protein 941339 7942216 RPR_05520 Rickettsia peacockii str. Rustic hypothetical protein YP_002916732.1 940887 D 562019 CDS YP_002916733.1 238650877 7942217 941441..942283 1 NC_012730.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); virB1 protein 942283 7942217 RPR_05525 Rickettsia peacockii str. Rustic virB1 protein YP_002916733.1 941441 D 562019 CDS YP_002916734.1 238650878 7942218 942288..942773 1 NC_012730.1 hypothetical protein 942773 7942218 RPR_05530 Rickettsia peacockii str. Rustic hypothetical protein YP_002916734.1 942288 D 562019 CDS YP_002916735.1 238650879 7942219 complement(942850..943944) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 943944 7942219 RPR_05535 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916735.1 942850 R 562019 CDS YP_002916736.1 238650880 7942220 complement(944131..944589) 1 NC_012730.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 944589 smpB 7942220 smpB Rickettsia peacockii str. Rustic SsrA-binding protein YP_002916736.1 944131 R 562019 CDS YP_002916737.1 238650881 7942221 complement(944586..945470) 1 NC_012730.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 945470 7942221 RPR_05545 Rickettsia peacockii str. Rustic dihydrodipicolinate synthase YP_002916737.1 944586 R 562019 CDS YP_002916738.1 238650882 7942222 complement(945656..946528) 1 NC_012730.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 946528 7942222 RPR_05550 Rickettsia peacockii str. Rustic branched-chain amino acid aminotransferase YP_002916738.1 945656 R 562019 CDS YP_002916739.1 238650883 7942223 946744..947424 1 NC_012730.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator protein OmpR 947424 7942223 RPR_05555 Rickettsia peacockii str. Rustic response regulator protein OmpR YP_002916739.1 946744 D 562019 CDS YP_002916740.1 238650884 7942224 947399..948838 1 NC_012730.1 COG0642 Signal transduction histidine kinase; osmolarity sensor protein envZ 948838 7942224 RPR_05560 Rickettsia peacockii str. Rustic osmolarity sensor protein envZ YP_002916740.1 947399 D 562019 CDS YP_002916741.1 238650885 7942225 948984..949691 1 NC_012730.1 COG0020 Undecaprenyl pyrophosphate synthase; UDP pyrophosphate synthetase 949691 7942225 RPR_05565 Rickettsia peacockii str. Rustic UDP pyrophosphate synthetase YP_002916741.1 948984 D 562019 CDS YP_002916742.1 238650886 7942226 949651..950340 1 NC_012730.1 COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 950340 7942226 RPR_05570 Rickettsia peacockii str. Rustic phosphatidate cytidylyltransferase YP_002916742.1 949651 D 562019 CDS YP_002916743.1 238650887 7942227 950340..950645 1 NC_012730.1 COG2919 Septum formation initiator; septum formation initiator 950645 7942227 RPR_05575 Rickettsia peacockii str. Rustic septum formation initiator YP_002916743.1 950340 D 562019 CDS YP_002916744.1 238650888 7942228 950796..951407 1 NC_012730.1 COG0349 Ribonuclease D; ribonuclease D 951407 7942228 RPR_05580 Rickettsia peacockii str. Rustic ribonuclease D YP_002916744.1 950796 D 562019 CDS YP_002916745.1 238650889 7942229 951812..951970 1 NC_012730.1 hypothetical protein 951970 7942229 RPR_05585 Rickettsia peacockii str. Rustic hypothetical protein YP_002916745.1 951812 D 562019 CDS YP_002916746.1 238650890 7942230 complement(952488..954995) 1 NC_012730.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 954995 leuS 7942230 leuS Rickettsia peacockii str. Rustic leucyl-tRNA synthetase YP_002916746.1 952488 R 562019 CDS YP_002916747.1 238650891 7942231 complement(955124..955627) 1 NC_012730.1 hypothetical protein 955627 7942231 RPR_05600 Rickettsia peacockii str. Rustic hypothetical protein YP_002916747.1 955124 R 562019 CDS YP_002916748.1 238650892 7942232 complement(955987..957126) 1 NC_012730.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 957126 7942232 RPR_05615 Rickettsia peacockii str. Rustic DNA polymerase III subunit beta YP_002916748.1 955987 R 562019 CDS YP_002916749.1 238650893 7942233 complement(957131..959587) 1 NC_012730.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 959587 pheT 7942233 pheT Rickettsia peacockii str. Rustic phenylalanyl-tRNA synthetase subunit beta YP_002916749.1 957131 R 562019 CDS YP_002916750.1 238650894 7942234 complement(959584..960633) 1 NC_012730.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 960633 pheS 7942234 pheS Rickettsia peacockii str. Rustic phenylalanyl-tRNA synthetase subunit alpha YP_002916750.1 959584 R 562019 CDS YP_002916751.1 238650895 7942235 complement(960876..962141) 1 NC_012730.1 COG0621 2-methylthioadenine synthetase; tRNA 2-methylthioadenosine synthase-like protein 962141 7942235 RPR_05635 Rickettsia peacockii str. Rustic tRNA 2-methylthioadenosine synthase-like protein YP_002916751.1 960876 R 562019 CDS YP_002916752.1 238650896 7942236 complement(962116..962928) 1 NC_012730.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 962928 dapF 7942236 dapF Rickettsia peacockii str. Rustic diaminopimelate epimerase YP_002916752.1 962116 R 562019 CDS YP_002916753.1 238650897 7942237 963909..964928 1 NC_012730.1 COG0438 Glycosyltransferase; capM protein 964928 7942237 RPR_05660 Rickettsia peacockii str. Rustic capM protein YP_002916753.1 963909 D 562019 CDS YP_002916754.1 238650898 7942238 complement(968646..969296) 1 NC_012730.1 hypothetical protein 969296 7942238 RPR_05710 Rickettsia peacockii str. Rustic hypothetical protein YP_002916754.1 968646 R 562019 CDS YP_002916755.1 238650899 7942239 complement(969693..970823) 1 NC_012730.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase 970823 murG 7942239 murG Rickettsia peacockii str. Rustic UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase YP_002916755.1 969693 R 562019 CDS YP_002916756.1 238650900 7942240 complement(970820..971953) 1 NC_012730.1 COG0772 Bacterial cell division membrane protein; cell division protein FtsW 971953 7942240 RPR_05720 Rickettsia peacockii str. Rustic cell division protein FtsW YP_002916756.1 970820 R 562019 CDS YP_002916757.1 238650901 7942241 complement(972085..973587) 1 NC_012730.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 973587 murD 7942241 murD Rickettsia peacockii str. Rustic UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_002916757.1 972085 R 562019 CDS YP_002916758.1 238650902 7942242 complement(973759..974007) 1 NC_012730.1 hypothetical protein 974007 7942242 RPR_05730 Rickettsia peacockii str. Rustic hypothetical protein YP_002916758.1 973759 R 562019 CDS YP_002916759.1 238650903 7942243 complement(974161..974781) 1 NC_012730.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 974781 lspA 7942243 lspA Rickettsia peacockii str. Rustic lipoprotein signal peptidase YP_002916759.1 974161 R 562019 CDS YP_002916760.1 238650904 7942244 complement(974960..976324) 1 NC_012730.1 COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 976324 7942244 RPR_05740 Rickettsia peacockii str. Rustic hypothetical protein YP_002916760.1 974960 R 562019 CDS YP_002916761.1 238650905 7942245 976563..976976 1 NC_012730.1 COG0615 Cytidylyltransferase; glycerol-3-phosphate cytidyltransferase TagD 976976 7942245 RPR_05745 Rickettsia peacockii str. Rustic glycerol-3-phosphate cytidyltransferase TagD YP_002916761.1 976563 D 562019 CDS YP_002916762.1 238650906 7942246 977147..978094 1 NC_012730.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2; cytochrome c oxidase polypeptide II 978094 7942246 RPR_05750 Rickettsia peacockii str. Rustic cytochrome c oxidase polypeptide II YP_002916762.1 977147 D 562019 CDS YP_002916763.1 238650907 7941999 978287..978670 1 NC_012730.1 COG0110 Acetyltransferase (isoleucine patch superfamily); hypothetical protein 978670 7941999 RPR_05755 Rickettsia peacockii str. Rustic hypothetical protein YP_002916763.1 978287 D 562019 CDS YP_002916764.1 238650908 7942412 978676..980274 1 NC_012730.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; cytochrome c oxidase polypeptide I 980274 7942412 RPR_05760 Rickettsia peacockii str. Rustic cytochrome c oxidase polypeptide I YP_002916764.1 978676 D 562019 CDS YP_002916765.1 238650909 7942413 980484..981212 1 NC_012730.1 COG2071 Predicted glutamine amidotransferases; glutamine amidotransferase, class I 981212 7942413 RPR_05765 Rickettsia peacockii str. Rustic glutamine amidotransferase, class I YP_002916765.1 980484 D 562019 CDS YP_002916766.1 238650910 7942414 complement(981217..981618) 1 NC_012730.1 hypothetical protein 981618 7942414 RPR_05770 Rickettsia peacockii str. Rustic hypothetical protein YP_002916766.1 981217 R 562019 CDS YP_002916767.1 238650911 7942415 981768..984284 1 NC_012730.1 COG2887 RecB family exonuclease; hypothetical protein 984284 7942415 RPR_05775 Rickettsia peacockii str. Rustic hypothetical protein YP_002916767.1 981768 D 562019 CDS YP_002916768.1 238650912 7942416 complement(984506..985453) 1 NC_012730.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF; muramoyltetrapeptide carboxypeptidase 985453 7942416 RPR_05780 Rickettsia peacockii str. Rustic muramoyltetrapeptide carboxypeptidase YP_002916768.1 984506 R 562019 CDS YP_002916769.1 238650913 7942417 complement(985649..986605) 1 NC_012730.1 hypothetical protein 986605 7942417 RPR_05785 Rickettsia peacockii str. Rustic hypothetical protein YP_002916769.1 985649 R 562019 CDS YP_002916770.1 238650914 7942418 complement(986692..988653) 1 NC_012730.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); putative soluble lytic murein transglycosylase precursor 988653 7942418 RPR_05790 Rickettsia peacockii str. Rustic putative soluble lytic murein transglycosylase precursor YP_002916770.1 986692 R 562019 CDS YP_002916771.1 238650915 7942419 complement(988869..989315) 1 NC_012730.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 989315 dut 7942419 dut Rickettsia peacockii str. Rustic deoxyuridine 5'-triphosphate nucleotidohydrolase YP_002916771.1 988869 R 562019 CDS YP_002916772.1 238650916 7942420 complement(989317..990231) 1 NC_012730.1 COG0616 Periplasmic serine proteases (ClpP class); signal peptide peptidase 990231 7942420 RPR_05800 Rickettsia peacockii str. Rustic signal peptide peptidase YP_002916772.1 989317 R 562019 CDS YP_002916773.1 238650917 7942421 complement(990396..991040) 1 NC_012730.1 COG0526 Thiol-disulfide isomerase and thioredoxins; thiol:disulfide interchange protein 991040 7942421 RPR_05805 Rickettsia peacockii str. Rustic thiol:disulfide interchange protein YP_002916773.1 990396 R 562019 CDS YP_002916774.1 238650918 7942422 complement(991248..991874) 1 NC_012730.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit; putative protocatechuate-3,4-dioxygenase, beta subunit 991874 7942422 RPR_05810 Rickettsia peacockii str. Rustic putative protocatechuate-3,4-dioxygenase, beta subunit YP_002916774.1 991248 R 562019 CDS YP_002916775.1 238650919 7942423 992015..993010 1 NC_012730.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1; FKBP-type peptidyl-prolyl cis-trans isomerase 993010 7942423 RPR_05815 Rickettsia peacockii str. Rustic FKBP-type peptidyl-prolyl cis-trans isomerase YP_002916775.1 992015 D 562019 CDS YP_002916776.1 238650920 7942424 993201..993581 1 NC_012730.1 hypothetical protein 993581 7942424 RPR_05820 Rickettsia peacockii str. Rustic hypothetical protein YP_002916776.1 993201 D 562019 CDS YP_002916777.1 238650921 7942425 993591..994439 1 NC_012730.1 COG0672 High-affinity Fe2+/Pb2+ permease; hypothetical protein 994439 7942425 RPR_05825 Rickettsia peacockii str. Rustic hypothetical protein YP_002916777.1 993591 D 562019 CDS YP_002916778.1 238650922 7942426 994469..995011 1 NC_012730.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 995011 7942426 RPR_05830 Rickettsia peacockii str. Rustic intracellular septation protein A YP_002916778.1 994469 D 562019 CDS YP_002916779.1 238650923 7942427 995309..995896 1 NC_012730.1 COG2823 Predicted periplasmic or secreted lipoprotein; lipoprotein 995896 7942427 RPR_05835 Rickettsia peacockii str. Rustic lipoprotein YP_002916779.1 995309 D 562019 CDS YP_002916780.1 238650924 7942428 995905..996867 1 NC_012730.1 COG0797 Lipoproteins; rare lipoprotein A precursor 996867 7942428 RPR_05840 Rickettsia peacockii str. Rustic rare lipoprotein A precursor YP_002916780.1 995905 D 562019 CDS YP_002916781.1 238650925 7942429 complement(997034..997954) 1 NC_012730.1 COG1686 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein dacF precursor 997954 7942429 RPR_05845 Rickettsia peacockii str. Rustic penicillin-binding protein dacF precursor YP_002916781.1 997034 R 562019 CDS YP_002916782.1 238650926 7942430 complement(999564..1001327) 1 NC_012730.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; putative lipid A export ATP-binding/permease protein MsbA 1001327 7942430 RPR_05860 Rickettsia peacockii str. Rustic putative lipid A export ATP-binding/permease protein MsbA YP_002916782.1 999564 R 562019 CDS YP_002916783.1 238650927 7942431 complement(1001320..1002348) 1 NC_012730.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1002348 ruvB 7942431 ruvB Rickettsia peacockii str. Rustic Holliday junction DNA helicase RuvB YP_002916783.1 1001320 R 562019 CDS YP_002916784.1 238650928 7942432 complement(1003347..1003958) 1 NC_012730.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1003958 ruvA 7942432 ruvA Rickettsia peacockii str. Rustic Holliday junction DNA helicase RuvA YP_002916784.1 1003347 R 562019 CDS YP_002916785.1 238650929 7942433 complement(1004360..1005328) 1 NC_012730.1 COG3177 Uncharacterized conserved protein; putative cell filamentation proteins (fic) 1005328 7942433 RPR_05890 Rickettsia peacockii str. Rustic putative cell filamentation proteins (fic) YP_002916785.1 1004360 R 562019 CDS YP_002916786.1 238650930 7942434 complement(1005541..1006821) 1 NC_012730.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1006821 7942434 RPR_05895 Rickettsia peacockii str. Rustic prolyl-tRNA synthetase YP_002916786.1 1005541 R 562019 CDS YP_002916787.1 238650931 7942435 complement(1006986..1007555) 1 NC_012730.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1007555 folE 7942435 folE Rickettsia peacockii str. Rustic GTP cyclohydrolase I YP_002916787.1 1006986 R 562019 CDS YP_002916788.1 238650932 7942438 1010307..1011047 1 NC_012730.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1011047 7942438 RPR_05930 Rickettsia peacockii str. Rustic 3-deoxy-manno-octulosonate cytidylyltransferase YP_002916788.1 1010307 D 562019 CDS YP_002916789.1 238650933 7942439 1011050..1012663 1 NC_012730.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1012663 pyrG 7942439 pyrG Rickettsia peacockii str. Rustic CTP synthetase YP_002916789.1 1011050 D 562019 CDS YP_002916790.1 238650934 7942440 1012874..1014397 1 NC_012730.1 COG3202 ATP/ADP translocase; ADP,ATP carrier protein 1014397 7942440 RPR_05940 Rickettsia peacockii str. Rustic ADP,ATP carrier protein YP_002916790.1 1012874 D 562019 CDS YP_002916791.1 238650935 7942441 1015855..1016820 1 NC_012730.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 1016820 7942441 RPR_05955 Rickettsia peacockii str. Rustic malate dehydrogenase YP_002916791.1 1015855 D 562019 CDS YP_002916792.1 238650936 7942442 complement(1022704..1023222) 1 NC_012730.1 COG1495 Disulfide bond formation protein DsbB; hypothetical protein 1023222 7942442 RPR_06030 Rickettsia peacockii str. Rustic hypothetical protein YP_002916792.1 1022704 R 562019 CDS YP_002916793.1 238650937 7942443 1023402..1024970 1 NC_012730.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 1024970 lysK 7942443 lysK Rickettsia peacockii str. Rustic lysyl-tRNA synthetase YP_002916793.1 1023402 D 562019 CDS YP_002916794.1 238650938 7942444 1025104..1026036 1 NC_012730.1 COG0679 Predicted permeases; hypothetical protein 1026036 7942444 RPR_06040 Rickettsia peacockii str. Rustic hypothetical protein YP_002916794.1 1025104 D 562019 CDS YP_002916795.1 238650939 7942445 1026176..1028479 1 NC_012730.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 1028479 7942445 RPR_06045 Rickettsia peacockii str. Rustic malic enzyme YP_002916795.1 1026176 D 562019 CDS YP_002916796.1 238650940 7942446 1029080..1030402 1 NC_012730.1 hypothetical protein 1030402 7942446 RPR_06055 Rickettsia peacockii str. Rustic hypothetical protein YP_002916796.1 1029080 D 562019 CDS YP_002916797.1 238650941 7942447 1032649..1033743 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 1033743 7942447 RPR_06070 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916797.1 1032649 D 562019 CDS YP_002916798.1 238650942 7942448 complement(1034115..1035332) 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter 1035332 7942448 RPR_06080 Rickettsia peacockii str. Rustic proline/betaine transporter YP_002916798.1 1034115 R 562019 CDS YP_002916799.1 238650943 7942449 1035569..1035817 1 NC_012730.1 COG2002 Regulators of stationary/sporulation gene expression; hypothetical protein 1035817 7942449 RPR_06085 Rickettsia peacockii str. Rustic hypothetical protein YP_002916799.1 1035569 D 562019 CDS YP_002916800.1 238650944 7942450 1035810..1036196 1 NC_012730.1 COG4374 Uncharacterized protein conserved in bacteria; hypothetical protein 1036196 7942450 RPR_06090 Rickettsia peacockii str. Rustic hypothetical protein YP_002916800.1 1035810 D 562019 CDS YP_002916801.1 238650945 7942451 1036464..1037558 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 1037558 7942451 RPR_06095 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916801.1 1036464 D 562019 CDS YP_002916802.1 238650946 7942453 complement(1037811..1038089) 1 NC_012730.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1038089 rpsT 7942453 rpsT Rickettsia peacockii str. Rustic 30S ribosomal protein S20 YP_002916802.1 1037811 R 562019 CDS YP_002916803.1 238650947 7942454 complement(1038108..1038518) 1 NC_012730.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1038518 rplQ 7942454 rplQ Rickettsia peacockii str. Rustic 50S ribosomal protein L17 YP_002916803.1 1038108 R 562019 CDS YP_002916804.1 238650948 7942455 complement(1038529..1039551) 1 NC_012730.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1039551 7942455 RPR_06110 Rickettsia peacockii str. Rustic DNA-directed RNA polymerase subunit alpha YP_002916804.1 1038529 R 562019 CDS YP_002916805.1 238650949 7942456 complement(1039570..1039953) 1 NC_012730.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1039953 7942456 RPR_06115 Rickettsia peacockii str. Rustic 30S ribosomal protein S11 YP_002916805.1 1039570 R 562019 CDS YP_002916806.1 238650950 7942457 complement(1039978..1040355) 1 NC_012730.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1040355 rpsM 7942457 rpsM Rickettsia peacockii str. Rustic 30S ribosomal protein S13 YP_002916806.1 1039978 R 562019 CDS YP_002916807.1 238650951 7942458 complement(1040414..1041052) 1 NC_012730.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1041052 adk 7942458 adk Rickettsia peacockii str. Rustic adenylate kinase YP_002916807.1 1040414 R 562019 CDS YP_002916808.1 238650952 7942459 complement(1041068..1042369) 1 NC_012730.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1042369 secY 7942459 secY Rickettsia peacockii str. Rustic preprotein translocase subunit SecY YP_002916808.1 1041068 R 562019 CDS YP_002916809.1 238650953 7942460 complement(1042373..1042834) 1 NC_012730.1 late assembly protein; 50S ribosomal protein L15 1042834 rplO 7942460 rplO Rickettsia peacockii str. Rustic 50S ribosomal protein L15 YP_002916809.1 1042373 R 562019 CDS YP_002916810.1 238650954 7942461 complement(1042848..1043039) 1 NC_012730.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1043039 rpmD 7942461 rpmD Rickettsia peacockii str. Rustic 50S ribosomal protein L30 YP_002916810.1 1042848 R 562019 CDS YP_002916811.1 238650955 7942462 complement(1043063..1043593) 1 NC_012730.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1043593 rpsE 7942462 rpsE Rickettsia peacockii str. Rustic 30S ribosomal protein S5 YP_002916811.1 1043063 R 562019 CDS YP_002916812.1 238650956 7942463 complement(1043611..1043967) 1 NC_012730.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1043967 rplR 7942463 rplR Rickettsia peacockii str. Rustic 50S ribosomal protein L18 YP_002916812.1 1043611 R 562019 CDS YP_002916813.1 238650957 7942464 complement(1043983..1044516) 1 NC_012730.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1044516 rplF 7942464 rplF Rickettsia peacockii str. Rustic 50S ribosomal protein L6 YP_002916813.1 1043983 R 562019 CDS YP_002916814.1 238650958 7942465 complement(1044525..1044923) 1 NC_012730.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1044923 rpsH 7942465 rpsH Rickettsia peacockii str. Rustic 30S ribosomal protein S8 YP_002916814.1 1044525 R 562019 CDS YP_002916815.1 238650959 7942466 complement(1044943..1045248) 1 NC_012730.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1045248 rpsN 7942466 rpsN Rickettsia peacockii str. Rustic 30S ribosomal protein S14 YP_002916815.1 1044943 R 562019 CDS YP_002916816.1 238650960 7942467 complement(1045266..1045805) 1 NC_012730.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1045805 rplE 7942467 rplE Rickettsia peacockii str. Rustic 50S ribosomal protein L5 YP_002916816.1 1045266 R 562019 CDS YP_002916817.1 238650961 7942468 complement(1045805..1046134) 1 NC_012730.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1046134 rplX 7942468 rplX Rickettsia peacockii str. Rustic 50S ribosomal protein L24 YP_002916817.1 1045805 R 562019 CDS YP_002916818.1 238650962 7942469 complement(1046135..1046503) 1 NC_012730.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1046503 rplN 7942469 rplN Rickettsia peacockii str. Rustic 50S ribosomal protein L14 YP_002916818.1 1046135 R 562019 CDS YP_002916819.1 238650963 7942470 complement(1046578..1046811) 1 NC_012730.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1046811 rpsQ 7942470 rpsQ Rickettsia peacockii str. Rustic 30S ribosomal protein S17 YP_002916819.1 1046578 R 562019 CDS YP_002916820.1 238650964 7942471 complement(1046813..1047028) 1 NC_012730.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1047028 rpmC 7942471 rpmC Rickettsia peacockii str. Rustic 50S ribosomal protein L29 YP_002916820.1 1046813 R 562019 CDS YP_002916821.1 238650965 7942472 complement(1047021..1047431) 1 NC_012730.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1047431 rplP 7942472 rplP Rickettsia peacockii str. Rustic 50S ribosomal protein L16 YP_002916821.1 1047021 R 562019 CDS YP_002916822.1 238650966 7942473 complement(1047446..1048099) 1 NC_012730.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1048099 rpsC 7942473 rpsC Rickettsia peacockii str. Rustic 30S ribosomal protein S3 YP_002916822.1 1047446 R 562019 CDS YP_002916823.1 238650967 7942474 complement(1048101..1048460) 1 NC_012730.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1048460 rplV 7942474 rplV Rickettsia peacockii str. Rustic 50S ribosomal protein L22 YP_002916823.1 1048101 R 562019 CDS YP_002916824.1 238650968 7942475 complement(1048469..1048747) 1 NC_012730.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1048747 rpsS 7942475 rpsS Rickettsia peacockii str. Rustic 30S ribosomal protein S19 YP_002916824.1 1048469 R 562019 CDS YP_002916825.1 238650969 7942476 complement(1048772..1049593) 1 NC_012730.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1049593 rplB 7942476 rplB Rickettsia peacockii str. Rustic 50S ribosomal protein L2 YP_002916825.1 1048772 R 562019 CDS YP_002916826.1 238650970 7942477 complement(1049594..1049890) 1 NC_012730.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1049890 rplW 7942477 rplW Rickettsia peacockii str. Rustic 50S ribosomal protein L23 YP_002916826.1 1049594 R 562019 CDS YP_002916827.1 238650971 7942478 complement(1049887..1050510) 1 NC_012730.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1050510 rplD 7942478 rplD Rickettsia peacockii str. Rustic 50S ribosomal protein L4 YP_002916827.1 1049887 R 562019 CDS YP_002916828.1 238650972 7942479 complement(1050621..1051268) 1 NC_012730.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1051268 rplC 7942479 rplC Rickettsia peacockii str. Rustic 50S ribosomal protein L3 YP_002916828.1 1050621 R 562019 CDS YP_002916829.1 238650973 7942480 complement(1051269..1051586) 1 NC_012730.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1051586 rpsJ 7942480 rpsJ Rickettsia peacockii str. Rustic 30S ribosomal protein S10 YP_002916829.1 1051269 R 562019 CDS YP_002916830.1 238650974 7942481 complement(1051583..1051717) 1 NC_012730.1 hypothetical protein 1051717 7942481 RPR_06240 Rickettsia peacockii str. Rustic hypothetical protein YP_002916830.1 1051583 R 562019 CDS YP_002916831.1 238650975 7942482 complement(1051827..1053011) 1 NC_012730.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1053011 7942482 RPR_06245 Rickettsia peacockii str. Rustic elongation factor Tu YP_002916831.1 1051827 R 562019 CDS YP_002916832.1 238650976 7942485 1053543..1054265 1 NC_012730.1 COG0566 rRNA methylases; 23S rRNA Gm2251 methyltransferase 1054265 7942485 RPR_06255 Rickettsia peacockii str. Rustic 23S rRNA Gm2251 methyltransferase YP_002916832.1 1053543 D 562019 CDS YP_002916833.1 238650977 7942486 1054376..1054828 1 NC_012730.1 hypothetical protein 1054828 7942486 RPR_06260 Rickettsia peacockii str. Rustic hypothetical protein YP_002916833.1 1054376 D 562019 CDS YP_002916834.1 238650978 7942487 1054825..1056216 1 NC_012730.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1056216 fumC 7942487 fumC Rickettsia peacockii str. Rustic fumarate hydratase YP_002916834.1 1054825 D 562019 CDS YP_002916835.1 238650979 7942488 1056313..1056567 1 NC_012730.1 COG4118 Antitoxin of toxin-antitoxin stability system; hypothetical protein 1056567 7942488 RPR_06270 Rickettsia peacockii str. Rustic hypothetical protein YP_002916835.1 1056313 D 562019 CDS YP_002916836.1 238650980 7942489 1056554..1056877 1 NC_012730.1 hypothetical protein 1056877 7942489 RPR_06275 Rickettsia peacockii str. Rustic hypothetical protein YP_002916836.1 1056554 D 562019 CDS YP_002916837.1 238650981 7942490 1057217..1058575 1 NC_012730.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1058575 7942490 RPR_06280 Rickettsia peacockii str. Rustic cell division protein FtsZ YP_002916837.1 1057217 D 562019 CDS YP_002916838.1 238650982 7942491 1058932..1059444 1 NC_012730.1 hypothetical protein 1059444 7942491 RPR_06285 Rickettsia peacockii str. Rustic hypothetical protein YP_002916838.1 1058932 D 562019 CDS YP_002916839.1 238650983 7942492 1059676..1059990 1 NC_012730.1 COG4574 Serine protease inhibitor ecotin; ecotin precursor 1059990 7942492 RPR_06290 Rickettsia peacockii str. Rustic ecotin precursor YP_002916839.1 1059676 D 562019 CDS YP_002916840.1 238650984 7942248 complement(1060184..1060756) 1 NC_012730.1 COG0694 Thioredoxin-like proteins and domains; hypothetical protein 1060756 7942248 RPR_06295 Rickettsia peacockii str. Rustic hypothetical protein YP_002916840.1 1060184 R 562019 CDS YP_002916841.1 238650985 7942249 complement(1061104..1062168) 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; ampG protein 1062168 7942249 RPR_06300 Rickettsia peacockii str. Rustic ampG protein YP_002916841.1 1061104 R 562019 CDS YP_002916842.1 238650986 7942250 complement(1062521..1063753) 1 NC_012730.1 COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase RhlE 1063753 7942250 RPR_06305 Rickettsia peacockii str. Rustic ATP-dependent RNA helicase RhlE YP_002916842.1 1062521 R 562019 CDS YP_002916843.1 238650987 7942251 complement(1064265..1064477) 1 NC_012730.1 COG1278 Cold shock proteins; cold shock protein 1064477 7942251 RPR_06310 Rickettsia peacockii str. Rustic cold shock protein YP_002916843.1 1064265 R 562019 CDS YP_002916844.1 238650988 7942253 complement(1065823..1066728) 1 NC_012730.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1066728 ksgA 7942253 ksgA Rickettsia peacockii str. Rustic dimethyladenosine transferase YP_002916844.1 1065823 R 562019 CDS YP_002916845.1 238650989 7942254 complement(1066882..1067769) 1 NC_012730.1 COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein 1067769 7942254 RPR_06330 Rickettsia peacockii str. Rustic hypothetical protein YP_002916845.1 1066882 R 562019 CDS YP_002916846.1 238650990 7942255 complement(1067925..1070045) 1 NC_012730.1 COG1452 Organic solvent tolerance protein OstA; organic solvent tolerance protein 1070045 7942255 RPR_06335 Rickettsia peacockii str. Rustic organic solvent tolerance protein YP_002916846.1 1067925 R 562019 CDS YP_002916847.1 238650991 7942256 1070296..1071669 1 NC_012730.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1071669 xseA 7942256 xseA Rickettsia peacockii str. Rustic exodeoxyribonuclease VII large subunit YP_002916847.1 1070296 D 562019 CDS YP_002916848.1 238650992 7942257 1072345..1073127 1 NC_012730.1 COG0708 Exonuclease III; exodeoxyribonuclease III 1073127 7942257 RPR_06355 Rickettsia peacockii str. Rustic exodeoxyribonuclease III YP_002916848.1 1072345 D 562019 CDS YP_002916849.1 238650993 7942258 1073323..1073586 1 NC_012730.1 COG4095 Uncharacterized conserved protein; hypothetical protein 1073586 7942258 RPR_06360 Rickettsia peacockii str. Rustic hypothetical protein YP_002916849.1 1073323 D 562019 CDS YP_002916850.1 238650994 7942259 1073590..1074933 1 NC_012730.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1074933 engA 7942259 engA Rickettsia peacockii str. Rustic GTP-binding protein EngA YP_002916850.1 1073590 D 562019 CDS YP_002916851.1 238650995 7942260 complement(1078858..1080294) 1 NC_012730.1 COG0661 Predicted unusual protein kinase; Ubiquinone biosynthesis monooxygenase UbiB 1080294 7942260 RPR_06410 Rickettsia peacockii str. Rustic Ubiquinone biosynthesis monooxygenase UbiB YP_002916851.1 1078858 R 562019 CDS YP_002916852.1 238650996 7942261 complement(1080442..1081188) 1 NC_012730.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1081188 ubiE 7942261 ubiE Rickettsia peacockii str. Rustic ubiquinone/menaquinone biosynthesis methyltransferase YP_002916852.1 1080442 R 562019 CDS YP_002916853.1 238650997 7942262 1081217..1082038 1 NC_012730.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 1082038 7942262 RPR_06420 Rickettsia peacockii str. Rustic formamidopyrimidine-DNA glycosylase YP_002916853.1 1081217 D 562019 CDS YP_002916854.1 238650998 7942263 1083981..1084229 1 NC_012730.1 hypothetical protein 1084229 7942263 RPR_06445 Rickettsia peacockii str. Rustic hypothetical protein YP_002916854.1 1083981 D 562019 CDS YP_002916855.1 238650999 7942264 complement(1086912..1087883) 1 NC_012730.1 COG0084 Mg-dependent DNase; TatD family deoxyribonuclease 1087883 7942264 RPR_06485 Rickettsia peacockii str. Rustic TatD family deoxyribonuclease YP_002916855.1 1086912 R 562019 CDS YP_002916856.1 238651000 7942265 complement(1087936..1089462) 1 NC_012730.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1089462 7942265 RPR_06490 Rickettsia peacockii str. Rustic methionyl-tRNA synthetase YP_002916856.1 1087936 R 562019 CDS YP_002916857.1 238651001 7942266 complement(1089459..1090070) 1 NC_012730.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1090070 tmk 7942266 tmk Rickettsia peacockii str. Rustic thymidylate kinase YP_002916857.1 1089459 R 562019 CDS YP_002916858.1 238651002 7942267 1090329..1091696 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter 1091696 7942267 RPR_06500 Rickettsia peacockii str. Rustic proline/betaine transporter YP_002916858.1 1090329 D 562019 CDS YP_002916859.1 238651003 7942268 complement(1091847..1092695) 1 NC_012730.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 1092695 ubiA 7942268 ubiA Rickettsia peacockii str. Rustic 4-hydroxybenzoate polyprenyltransferase YP_002916859.1 1091847 R 562019 CDS YP_002916860.1 238651004 7942269 1093830..1096268 1 NC_012730.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1096268 valS 7942269 valS Rickettsia peacockii str. Rustic valyl-tRNA synthetase YP_002916860.1 1093830 D 562019 CDS YP_002916861.1 238651005 7942270 1096237..1097037 1 NC_012730.1 COG3475 LPS biosynthesis protein; LicD family protein 1097037 7942270 RPR_06535 Rickettsia peacockii str. Rustic LicD family protein YP_002916861.1 1096237 D 562019 CDS YP_002916862.1 238651006 7942271 1098780..1100066 1 NC_012730.1 COG1322 Uncharacterized protein conserved in bacteria; RmuC family protein 1100066 7942271 RPR_06550 Rickettsia peacockii str. Rustic RmuC family protein YP_002916862.1 1098780 D 562019 CDS YP_002916863.1 238651007 7942272 1105440..1105829 1 NC_012730.1 COG5528 Predicted integral membrane protein; hypothetical protein 1105829 7942272 RPR_06605 Rickettsia peacockii str. Rustic hypothetical protein YP_002916863.1 1105440 D 562019 CDS YP_002916864.1 238651008 7942273 complement(1106188..1107465) 1 NC_012730.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1107465 clpX 7942273 clpX Rickettsia peacockii str. Rustic ATP-dependent protease ATP-binding subunit ClpX YP_002916864.1 1106188 R 562019 CDS YP_002916865.1 238651009 7942274 complement(1107502..1108053) 1 NC_012730.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; ribosomal-protein-alanine acetyltransferase 1108053 7942274 RPR_06615 Rickettsia peacockii str. Rustic ribosomal-protein-alanine acetyltransferase YP_002916865.1 1107502 R 562019 CDS YP_002916866.1 238651010 7942275 complement(1108217..1108903) 1 NC_012730.1 COG0603 Predicted PP-loop superfamily ATPase; trans-regulatory protein ExsB 1108903 7942275 RPR_06620 Rickettsia peacockii str. Rustic trans-regulatory protein ExsB YP_002916866.1 1108217 R 562019 CDS YP_002916867.1 238651011 7942276 complement(1108900..1109244) 1 NC_012730.1 COG1598 Uncharacterized conserved protein; HicB family protein 1109244 7942276 RPR_06625 Rickettsia peacockii str. Rustic HicB family protein YP_002916867.1 1108900 R 562019 CDS YP_002916868.1 238651012 7942278 1109867..1111597 1 NC_012730.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; putative lipid A export ATP-binding/permease protein MsbA 1111597 7942278 RPR_06640 Rickettsia peacockii str. Rustic putative lipid A export ATP-binding/permease protein MsbA YP_002916868.1 1109867 D 562019 CDS YP_002916869.1 238651013 7942279 1111900..1112148 1 NC_012730.1 hypothetical protein 1112148 7942279 RPR_06645 Rickettsia peacockii str. Rustic hypothetical protein YP_002916869.1 1111900 D 562019 CDS YP_002916870.1 238651014 7942280 1112848..1113849 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; bicyclomycin resistance protein 1113849 7942280 RPR_06650 Rickettsia peacockii str. Rustic bicyclomycin resistance protein YP_002916870.1 1112848 D 562019 CDS YP_002916871.1 238651015 7942281 1113982..1115337 1 NC_012730.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component; lipoprotein releasing system transmembrane protein 1115337 7942281 RPR_06655 Rickettsia peacockii str. Rustic lipoprotein releasing system transmembrane protein YP_002916871.1 1113982 D 562019 CDS YP_002916872.1 238651016 7942282 1115330..1115995 1 NC_012730.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component; lipoprotein releasing system ATP-binding protein 1115995 7942282 RPR_06660 Rickettsia peacockii str. Rustic lipoprotein releasing system ATP-binding protein YP_002916872.1 1115330 D 562019 CDS YP_002916873.1 238651017 7942283 1116214..1118115 1 NC_012730.1 hypothetical protein 1118115 7942283 RPR_06665 Rickettsia peacockii str. Rustic hypothetical protein YP_002916873.1 1116214 D 562019 CDS YP_002916874.1 238651018 7942284 1118190..1119464 1 NC_012730.1 COG4536 Putative Mg2+ and Co2+ transporter CorB; magnesium and cobalt efflux protein 1119464 7942284 RPR_06670 Rickettsia peacockii str. Rustic magnesium and cobalt efflux protein YP_002916874.1 1118190 D 562019 CDS YP_002916875.1 238651019 7942285 1119457..1121442 1 NC_012730.1 COG1138 Cytochrome c biogenesis factor; heme chaperone--apocytochrome heme-lyase 1121442 7942285 RPR_06675 Rickettsia peacockii str. Rustic heme chaperone--apocytochrome heme-lyase YP_002916875.1 1119457 D 562019 CDS YP_002916876.1 238651020 7942286 1121752..1122846 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 1122846 7942286 RPR_06685 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916876.1 1121752 D 562019 CDS YP_002916877.1 238651021 7942287 complement(1122889..1123329) 1 NC_012730.1 COG2867 Oligoketide cyclase/lipid transport protein; hypothetical protein 1123329 7942287 RPR_06690 Rickettsia peacockii str. Rustic hypothetical protein YP_002916877.1 1122889 R 562019 CDS YP_002916878.1 238651022 7942288 complement(1123329..1123613) 1 NC_012730.1 COG5508 Uncharacterized conserved small protein; hypothetical protein 1123613 7942288 RPR_06695 Rickettsia peacockii str. Rustic hypothetical protein YP_002916878.1 1123329 R 562019 CDS YP_002916879.1 238651023 7942289 1123627..1124361 1 NC_012730.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1124361 7942289 RPR_06700 Rickettsia peacockii str. Rustic 16S ribosomal RNA methyltransferase RsmE YP_002916879.1 1123627 D 562019 CDS YP_002916880.1 238651024 7942290 complement(1124450..1124686) 1 NC_012730.1 COG2155 Uncharacterized conserved protein; hypothetical protein 1124686 7942290 RPR_06705 Rickettsia peacockii str. Rustic hypothetical protein YP_002916880.1 1124450 R 562019 CDS YP_002916881.1 238651137 7942291 complement(1124943..1127618) 1 NC_012730.1 As a result of a frameshift mutation, protein is truncated relative to rickettsial homologs but contains the entire acriflavin resistance protein domain; truncated acriflavin resistance protein 1127618 7942291 RPR_06710 Rickettsia peacockii str. Rustic truncated acriflavin resistance protein YP_002916881.1 1124943 R 562019 CDS YP_002916882.1 238651025 7942163 1128447..1128779 1 NC_012730.1 COG0776 Bacterial nucleoid DNA-binding protein; DNA-binding protein HU 1128779 7942163 RPR_06720 Rickettsia peacockii str. Rustic DNA-binding protein HU YP_002916882.1 1128447 D 562019 CDS YP_002916883.1 238651026 7942292 1128919..1129728 1 NC_012730.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 1129728 7942292 RPR_06725 Rickettsia peacockii str. Rustic DNA polymerase III subunit delta' YP_002916883.1 1128919 D 562019 CDS YP_002916884.1 238651027 7942293 1129938..1131287 1 NC_012730.1 COG0541 Signal recognition particle GTPase; signal recognition particle protein 1131287 7942293 RPR_06730 Rickettsia peacockii str. Rustic signal recognition particle protein YP_002916884.1 1129938 D 562019 CDS YP_002916885.1 238651028 7942294 complement(1136106..1137605) 1 NC_012730.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1137605 lnt 7942294 lnt Rickettsia peacockii str. Rustic apolipoprotein N-acyltransferase YP_002916885.1 1136106 R 562019 CDS YP_002916886.1 238651029 7942295 1137681..1138463 1 NC_012730.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 1138463 7942295 RPR_06795 Rickettsia peacockii str. Rustic enoyl-(acyl carrier protein) reductase YP_002916886.1 1137681 D 562019 CDS YP_002916887.1 238651030 7942296 complement(1138659..1139822) 1 NC_012730.1 hypothetical protein 1139822 7942296 RPR_06800 Rickettsia peacockii str. Rustic hypothetical protein YP_002916887.1 1138659 R 562019 CDS YP_002916888.1 238651031 7942297 complement(1141039..1141959) 1 NC_012730.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 1141959 xerD 7942297 xerD Rickettsia peacockii str. Rustic site-specific tyrosine recombinase XerD YP_002916888.1 1141039 R 562019 CDS YP_002916889.1 238651032 7942299 1143768..1144241 1 NC_012730.1 COG4765 Uncharacterized protein conserved in bacteria; hypothetical protein 1144241 7942299 RPR_06840 Rickettsia peacockii str. Rustic hypothetical protein YP_002916889.1 1143768 D 562019 CDS YP_002916890.1 238651033 7942300 1144242..1145477 1 NC_012730.1 COG3307 Lipid A core - O-antigen ligase and related enzymes; O-antigen polymerase 1145477 7942300 RPR_06845 Rickettsia peacockii str. Rustic O-antigen polymerase YP_002916890.1 1144242 D 562019 CDS YP_002916891.1 238651034 7942301 1145635..1146006 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 1146006 7942301 RPR_06850 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit A YP_002916891.1 1145635 D 562019 CDS YP_002916892.1 238651035 7942302 1146011..1146535 1 NC_012730.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1146535 7942302 RPR_06855 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit B YP_002916892.1 1146011 D 562019 CDS YP_002916893.1 238651036 7942303 1146513..1147241 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 1147241 7942303 RPR_06860 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit C YP_002916893.1 1146513 D 562019 CDS YP_002916894.1 238651037 7942304 1147340..1148515 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1148515 7942304 RPR_06865 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit D YP_002916894.1 1147340 D 562019 CDS YP_002916895.1 238651038 7942305 1148933..1149436 1 NC_012730.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1149436 7942305 RPR_06870 Rickettsia peacockii str. Rustic NADH dehydrogenase subunit E YP_002916895.1 1148933 D 562019 CDS YP_002916896.1 238651039 7942306 1149429..1149677 1 NC_012730.1 COG0759 Uncharacterized conserved protein; hypothetical protein 1149677 7942306 RPR_06875 Rickettsia peacockii str. Rustic hypothetical protein YP_002916896.1 1149429 D 562019 CDS YP_002916897.1 238651040 7942307 1149775..1149978 1 NC_012730.1 COG2350 Uncharacterized protein conserved in bacteria; hypothetical protein 1149978 7942307 RPR_06880 Rickettsia peacockii str. Rustic hypothetical protein YP_002916897.1 1149775 D 562019 CDS YP_002916898.1 238651041 7942308 1149971..1150522 1 NC_012730.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 1150522 7942308 RPR_06885 Rickettsia peacockii str. Rustic 3-methyladenine DNA glycosylase YP_002916898.1 1149971 D 562019 CDS YP_002916899.1 238651042 7942309 complement(1150780..1151214) 1 NC_012730.1 hypothetical protein 1151214 7942309 RPR_06890 Rickettsia peacockii str. Rustic hypothetical protein YP_002916899.1 1150780 R 562019 CDS YP_002916900.1 238651043 7942310 complement(1151910..1152152) 1 NC_012730.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1152152 7942310 RPR_06905 Rickettsia peacockii str. Rustic exodeoxyribonuclease VII small subunit YP_002916900.1 1151910 R 562019 CDS YP_002916901.1 238651044 7942311 complement(1152165..1154795) 1 NC_012730.1 hypothetical protein 1154795 7942311 RPR_06910 Rickettsia peacockii str. Rustic hypothetical protein YP_002916901.1 1152165 R 562019 CDS YP_002916902.1 238651045 7942312 1154855..1155352 1 NC_012730.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1155352 rimM 7942312 rimM Rickettsia peacockii str. Rustic 16S rRNA-processing protein RimM YP_002916902.1 1154855 D 562019 CDS YP_002916903.1 238651046 7942313 1155701..1158193 1 NC_012730.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis; outer membrane assembly protein 1158193 7942313 RPR_06920 Rickettsia peacockii str. Rustic outer membrane assembly protein YP_002916903.1 1155701 D 562019 CDS YP_002916904.1 238651047 7942314 complement(1158334..1158693) 1 NC_012730.1 COG0457 FOG: TPR repeat; hypothetical protein 1158693 7942314 RPR_06925 Rickettsia peacockii str. Rustic hypothetical protein YP_002916904.1 1158334 R 562019 CDS YP_002916905.1 238651048 7942315 complement(1158846..1159061) 1 NC_012730.1 hypothetical protein 1159061 7942315 RPR_06930 Rickettsia peacockii str. Rustic hypothetical protein YP_002916905.1 1158846 R 562019 CDS YP_002916906.1 238651049 7942316 1159261..1159929 1 NC_012730.1 COG1533 DNA repair photolyase; spore photoproduct lyase 1159929 7942316 RPR_06935 Rickettsia peacockii str. Rustic spore photoproduct lyase YP_002916906.1 1159261 D 562019 CDS YP_002916907.1 238651050 7942317 complement(1160211..1161128) 1 NC_012730.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1161128 7942317 RPR_06940 Rickettsia peacockii str. Rustic protoheme IX farnesyltransferase YP_002916907.1 1160211 R 562019 CDS YP_002916908.1 238651051 7942318 1161253..1161870 1 NC_012730.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1161870 rpsD 7942318 rpsD Rickettsia peacockii str. Rustic 30S ribosomal protein S4 YP_002916908.1 1161253 D 562019 CDS YP_002916909.1 238651052 7942319 1162060..1162701 1 NC_012730.1 30S ribosomal protein S4 1162701 7942319 RPR_06950 Rickettsia peacockii str. Rustic 30S ribosomal protein S4 YP_002916909.1 1162060 D 562019 CDS YP_002916910.1 238651053 7942320 complement(1164385..1165557) 1 NC_012730.1 COG0438 Glycosyltransferase; glycosyltransferase 1165557 7942320 RPR_06965 Rickettsia peacockii str. Rustic glycosyltransferase YP_002916910.1 1164385 R 562019 CDS YP_002916911.1 238651054 7942321 1165590..1166357 1 NC_012730.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase family protein 1166357 7942321 RPR_06970 Rickettsia peacockii str. Rustic alpha/beta hydrolase family protein YP_002916911.1 1165590 D 562019 CDS YP_002916912.1 238651055 7942322 1166367..1167161 1 NC_012730.1 hypothetical protein 1167161 7942322 RPR_06975 Rickettsia peacockii str. Rustic hypothetical protein YP_002916912.1 1166367 D 562019 CDS YP_002916913.1 238651056 7942323 complement(1168255..1170069) 1 NC_012730.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyltransferase 1170069 7942323 RPR_06995 Rickettsia peacockii str. Rustic glycosyltransferase YP_002916913.1 1168255 R 562019 CDS YP_002916914.1 238651057 7942324 complement(1170506..1170991) 1 NC_012730.1 COG0500 SAM-dependent methyltransferases; methyltransferase 1170991 7942324 RPR_07000 Rickettsia peacockii str. Rustic methyltransferase YP_002916914.1 1170506 R 562019 CDS YP_002916915.1 238651058 7942325 complement(1172304..1173437) 1 NC_012730.1 COG0381 UDP-N-acetylglucosamine 2-epimerase; UDP-2-acetamido-2,6-dideoxy-beta-L-talose 2-epimerase 1173437 7942325 RPR_07015 Rickettsia peacockii str. Rustic UDP-2-acetamido-2,6-dideoxy-beta-L-talose 2-epimerase YP_002916915.1 1172304 R 562019 CDS YP_002916916.1 238651059 7942326 complement(1173430..1174455) 1 NC_012730.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases; capD protein 1174455 7942326 RPR_07020 Rickettsia peacockii str. Rustic capD protein YP_002916916.1 1173430 R 562019 CDS YP_002916917.1 238651060 7942327 complement(1174638..1175492) 1 NC_012730.1 COG1091 dTDP-4-dehydrorhamnose reductase; UDP-2-acetamido-2,6-dideoxy-beta-L-mannose 4-dehydrogenase 1175492 7942327 RPR_07025 Rickettsia peacockii str. Rustic UDP-2-acetamido-2,6-dideoxy-beta-L-mannose 4-dehydrogenase YP_002916917.1 1174638 R 562019 CDS YP_002916918.1 238651061 7942328 complement(1175663..1175833) 1 NC_012730.1 COG3093 Plasmid maintenance system antidote protein; plasmid maintenance system antidote protein 1175833 7942328 RPR_07030 Rickettsia peacockii str. Rustic plasmid maintenance system antidote protein YP_002916918.1 1175663 R 562019 CDS YP_002916919.1 238651062 7942329 complement(1176091..1176555) 1 NC_012730.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1176555 7942329 RPR_07035 Rickettsia peacockii str. Rustic Holliday junction resolvase-like protein YP_002916919.1 1176091 R 562019 CDS YP_002916920.1 238651063 7942083 1178530..1179468 1 NC_012730.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein 1179468 7942083 RPR_07055 Rickettsia peacockii str. Rustic hypothetical protein YP_002916920.1 1178530 D 562019 CDS YP_002916921.1 238651064 7942084 1179550..1180152 1 NC_012730.1 COG0450 Peroxiredoxin; thioredoxin peroxidase 1 1180152 7942084 RPR_07060 Rickettsia peacockii str. Rustic thioredoxin peroxidase 1 YP_002916921.1 1179550 D 562019 CDS YP_002916922.1 238651065 7942085 1181557..1183887 1 NC_012730.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1183887 7942085 RPR_07080 Rickettsia peacockii str. Rustic DNA topoisomerase I YP_002916922.1 1181557 D 562019 CDS YP_002916923.1 238651066 7942086 1183996..1185339 1 NC_012730.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1185339 gltX 7942086 gltX Rickettsia peacockii str. Rustic glutamyl-tRNA synthetase YP_002916923.1 1183996 D 562019 CDS YP_002916924.1 238651138 7942087 complement(1186806..1187063) 1 NC_012730.1 COG1471: Ribosomal protein S4E; ribosomal protein S4E 1187063 7942087 RPR_07100 Rickettsia peacockii str. Rustic ribosomal protein S4E YP_002916924.1 1186806 R 562019 CDS YP_002916925.1 238651067 7942164 complement(1188540..1189499) 1 NC_012730.1 COG0598 Mg2+ and Co2+ transporters; magnesium and cobalt transport protein CorA 1189499 7942164 RPR_07115 Rickettsia peacockii str. Rustic magnesium and cobalt transport protein CorA YP_002916925.1 1188540 R 562019 CDS YP_002916926.1 238651068 7942089 complement(1194252..1196051) 1 NC_012730.1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; nitrogen regulation protein 1196051 7942089 RPR_07145 Rickettsia peacockii str. Rustic nitrogen regulation protein YP_002916926.1 1194252 R 562019 CDS YP_002916927.1 238651069 7942090 complement(1196415..1196615) 1 NC_012730.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1196615 rpsU 7942090 rpsU Rickettsia peacockii str. Rustic 30S ribosomal protein S21 YP_002916927.1 1196415 R 562019 CDS YP_002916928.1 238651070 7942091 1196694..1197305 1 NC_012730.1 COG5590 Uncharacterized conserved protein; hypothetical protein 1197305 7942091 RPR_07155 Rickettsia peacockii str. Rustic hypothetical protein YP_002916928.1 1196694 D 562019 CDS YP_002916929.1 238651071 7942092 1198604..1201882 1 NC_012730.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin); isoleucyl-tRNA synthetase 1201882 ileS 7942092 ileS Rickettsia peacockii str. Rustic isoleucyl-tRNA synthetase YP_002916929.1 1198604 D 562019 CDS YP_002916930.1 238651072 7942093 complement(1204227..1206224) 1 NC_012730.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit; propionyl-CoA carboxylase biotin-containing subunit 1206224 7942093 RPR_07220 Rickettsia peacockii str. Rustic propionyl-CoA carboxylase biotin-containing subunit YP_002916930.1 1204227 R 562019 CDS YP_002916931.1 238651073 7942094 complement(1206322..1207866) 1 NC_012730.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); propionyl-CoA carboxylase carboxyltransferase subunit 1207866 7942094 RPR_07225 Rickettsia peacockii str. Rustic propionyl-CoA carboxylase carboxyltransferase subunit YP_002916931.1 1206322 R 562019 CDS YP_002916932.1 238651074 7942095 1208430..1211852 1 NC_012730.1 Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein; acylglycerophosphoethanolamine acyltransferase 1211852 7942095 RPR_07235 Rickettsia peacockii str. Rustic acylglycerophosphoethanolamine acyltransferase YP_002916932.1 1208430 D 562019 CDS YP_002916933.1 238651075 7942096 complement(1212097..1212330) 1 NC_012730.1 putative COG3070 Regulator of competence-specific genes, TfoX N-terminal domain; hypothetical protein 1212330 7942096 RPR_07240 Rickettsia peacockii str. Rustic hypothetical protein YP_002916933.1 1212097 R 562019 CDS YP_002916934.1 238651076 7942097 complement(1212327..1213088) 1 NC_012730.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Zinc/manganese ABC transporter permease protein 1213088 7942097 RPR_07245 Rickettsia peacockii str. Rustic Zinc/manganese ABC transporter permease protein YP_002916934.1 1212327 R 562019 CDS YP_002916935.1 238651077 7942098 1213229..1214098 1 NC_012730.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 1214098 7942098 RPR_07250 Rickettsia peacockii str. Rustic 3-demethylubiquinone-9 3-methyltransferase YP_002916935.1 1213229 D 562019 CDS YP_002916936.1 238651078 7942099 1214397..1215938 1 NC_012730.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1215938 gltX 7942099 gltX Rickettsia peacockii str. Rustic glutamyl-tRNA synthetase YP_002916936.1 1214397 D 562019 CDS YP_002916937.1 238651079 7942100 1215935..1216471 1 NC_012730.1 COG5342 Invasion protein B, involved in pathogenesis; hypothetical protein 1216471 7942100 RPR_07260 Rickettsia peacockii str. Rustic hypothetical protein YP_002916937.1 1215935 D 562019 CDS YP_002916938.1 238651080 7942101 complement(1218258..1219901) 1 NC_012730.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 1219901 groEL 7942101 groEL Rickettsia peacockii str. Rustic chaperonin GroEL YP_002916938.1 1218258 R 562019 CDS YP_002916939.1 238651081 7942102 complement(1219929..1220216) 1 NC_012730.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1220216 groES 7942102 groES Rickettsia peacockii str. Rustic co-chaperonin GroES YP_002916939.1 1219929 R 562019 CDS YP_002916940.1 238651082 7942103 complement(1222331..1222726) 1 NC_012730.1 hypothetical protein 1222726 7942103 RPR_07305 Rickettsia peacockii str. Rustic hypothetical protein YP_002916940.1 1222331 R 562019 CDS YP_002916941.1 238651083 7942104 complement(1223422..1224141) 1 NC_012730.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 1224141 rph 7942104 rph Rickettsia peacockii str. Rustic ribonuclease PH YP_002916941.1 1223422 R 562019 CDS YP_002916942.1 238651084 7942105 1224365..1224901 1 NC_012730.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1224901 7942105 RPR_07320 Rickettsia peacockii str. Rustic heat shock protein GrpE YP_002916942.1 1224365 D 562019 CDS YP_002916943.1 238651085 7942106 1225045..1226100 1 NC_012730.1 COG0628 Predicted permease; putative permease PerM-like protein 1226100 7942106 RPR_07325 Rickettsia peacockii str. Rustic putative permease PerM-like protein YP_002916943.1 1225045 D 562019 CDS YP_002916944.1 238651086 7942107 1226116..1226784 1 NC_012730.1 COG0593 ATPase involved in DNA replication initiation; hypothetical protein 1226784 7942107 RPR_07330 Rickettsia peacockii str. Rustic hypothetical protein YP_002916944.1 1226116 D 562019 CDS YP_002916945.1 238651087 7942108 complement(1228301..1229395) 1 NC_012730.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 1229395 7942108 RPR_07360 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002916945.1 1228301 R 562019 CDS YP_002916946.1 238651088 7942109 complement(1230109..1231101) 1 NC_012730.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1231101 obgE 7942109 obgE Rickettsia peacockii str. Rustic GTPase ObgE YP_002916946.1 1230109 R 562019 CDS YP_002916947.1 238651089 7942110 complement(1231210..1232517) 1 NC_012730.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 1232517 gltA 7942110 gltA Rickettsia peacockii str. Rustic type II citrate synthase YP_002916947.1 1231210 R 562019 CDS YP_002916948.1 238651090 7942111 complement(1233160..1233945) 1 NC_012730.1 COG1573 Uracil-DNA glycosylase; N-terminus of bacteriophage-type DNA polymerase 1233945 7942111 RPR_07390 Rickettsia peacockii str. Rustic N-terminus of bacteriophage-type DNA polymerase YP_002916948.1 1233160 R 562019 CDS YP_002916949.1 238651091 7942112 1233962..1234903 1 NC_012730.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; ribosomal large subunit pseudouridine synthase D 1234903 7942112 RPR_07395 Rickettsia peacockii str. Rustic ribosomal large subunit pseudouridine synthase D YP_002916949.1 1233962 D 562019 CDS YP_002916950.1 238651092 7942113 1236534..1238108 1 NC_012730.1 fusion of hemK/trmB; N-terminal HemK domain transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; C-terminal; bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase 1238108 7942113 RPR_07430 Rickettsia peacockii str. Rustic bifunctional N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase/tRNA (m7G46) methyltransferase YP_002916950.1 1236534 D 562019 CDS YP_002916951.1 238651093 7942114 complement(1238074..1239012) 1 NC_012730.1 COG0009 Putative translation factor (SUA5); hypothetical protein 1239012 7942114 RPR_07435 Rickettsia peacockii str. Rustic hypothetical protein YP_002916951.1 1238074 R 562019 CDS YP_002916952.1 238651094 7942115 complement(1239009..1241003) 1 NC_012730.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1241003 glyS 7942115 glyS Rickettsia peacockii str. Rustic glycyl-tRNA synthetase subunit beta YP_002916952.1 1239009 R 562019 CDS YP_002916953.1 238651095 7942116 complement(1241000..1241866) 1 NC_012730.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 1241866 glyQ 7942116 glyQ Rickettsia peacockii str. Rustic glycyl-tRNA synthetase subunit alpha YP_002916953.1 1241000 R 562019 CDS YP_002916954.1 238651096 7942117 complement(1241898..1242305) 1 NC_012730.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain; putative plasmid stability protein 1242305 7942117 RPR_07450 Rickettsia peacockii str. Rustic putative plasmid stability protein YP_002916954.1 1241898 R 562019 CDS YP_002916955.1 238651097 7942118 complement(1242302..1242547) 1 NC_012730.1 COG2161 Antitoxin of toxin-antitoxin stability system; hypothetical protein 1242547 7942118 RPR_07455 Rickettsia peacockii str. Rustic hypothetical protein YP_002916955.1 1242302 R 562019 CDS YP_002916956.1 238651098 7942119 complement(1242634..1243263) 1 NC_012730.1 COG1636 Uncharacterized protein conserved in bacteria; putative cytoplasmic protein 1243263 7942119 RPR_07460 Rickettsia peacockii str. Rustic putative cytoplasmic protein YP_002916956.1 1242634 R 562019 CDS YP_002916957.1 238651099 7942120 complement(1244743..1245693) 1 NC_012730.1 hypothetical protein 1245693 7942120 RPR_07480 Rickettsia peacockii str. Rustic hypothetical protein YP_002916957.1 1244743 R 562019 CDS YP_002916958.1 238651100 7942121 complement(1245703..1246338) 1 NC_012730.1 COG1474 Cdc6-related protein, AAA superfamily ATPase; hypothetical protein 1246338 7942121 RPR_07485 Rickettsia peacockii str. Rustic hypothetical protein YP_002916958.1 1245703 R 562019 CDS YP_002916959.1 238651101 7942122 complement(1246413..1247984) 1 NC_012730.1 hypothetical protein 1247984 7942122 RPR_07490 Rickettsia peacockii str. Rustic hypothetical protein YP_002916959.1 1246413 R 562019 CDS YP_002916960.1 238651102 7942123 1248183..1250819 1 NC_012730.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1250819 alaS 7942123 alaS Rickettsia peacockii str. Rustic alanyl-tRNA synthetase YP_002916960.1 1248183 D 562019 CDS YP_002916961.1 238651103 7942124 complement(1251028..1251765) 1 NC_012730.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1251765 truA 7942124 truA Rickettsia peacockii str. Rustic tRNA pseudouridine synthase A YP_002916961.1 1251028 R 562019 CDS YP_002916962.1 238651104 7942125 complement(1251861..1253765) 1 NC_012730.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 1253765 7942125 RPR_07505 Rickettsia peacockii str. Rustic RNA polymerase sigma factor RpoD YP_002916962.1 1251861 R 562019 CDS YP_002916963.1 238651105 7942126 complement(1253810..1255597) 1 NC_012730.1 synthesizes RNA primers at the replication forks; DNA primase 1255597 dnaG 7942126 dnaG Rickettsia peacockii str. Rustic DNA primase YP_002916963.1 1253810 R 562019 CDS YP_002916964.1 238651106 7942127 complement(1255602..1256216) 1 NC_012730.1 COG0170 Dolichol kinase; hypothetical protein 1256216 7942127 RPR_07515 Rickettsia peacockii str. Rustic hypothetical protein YP_002916964.1 1255602 R 562019 CDS YP_002916965.1 238651107 7942128 1256345..1256965 1 NC_012730.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 1256965 greA 7942128 greA Rickettsia peacockii str. Rustic transcription elongation factor GreA YP_002916965.1 1256345 D 562019 CDS YP_002916966.1 238651108 7942129 1258731..1259369 1 NC_012730.1 COG2834 Outer membrane lipoprotein-sorting protein; hypothetical protein 1259369 7942129 RPR_07545 Rickettsia peacockii str. Rustic hypothetical protein YP_002916966.1 1258731 D 562019 CDS YP_002916967.1 238651109 7942130 1259591..1261120 1 NC_012730.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; rhe tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1261120 7942130 RPR_07550 Rickettsia peacockii str. Rustic DNA polymerase III subunits gamma and tau YP_002916967.1 1259591 D 562019 CDS YP_002916968.1 238651110 7942131 1261140..1261463 1 NC_012730.1 COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein 1261463 7942131 RPR_07555 Rickettsia peacockii str. Rustic hypothetical protein YP_002916968.1 1261140 D 562019 CDS YP_002916969.1 238651111 7942132 complement(1262341..1263036) 1 NC_012730.1 COG3577 Predicted aspartyl protease; retroviral aspartyl protease family protein 1263036 7942132 RPR_07575 Rickettsia peacockii str. Rustic retroviral aspartyl protease family protein YP_002916969.1 1262341 R 562019 CDS YP_002916970.1 238651112 7942133 complement(1264235..1264474) 1 NC_012730.1 COG2161 Antitoxin of toxin-antitoxin stability system; RelB 1264474 7942133 RPR_07595 Rickettsia peacockii str. Rustic RelB YP_002916970.1 1264235 R 562019 CDS YP_002916971.1 238651113 7942134 complement(1264679..1265401) 1 NC_012730.1 COG1126 ABC-type polar amino acid transport system, ATPase component; hypothetical protein 1265401 7942134 RPR_07600 Rickettsia peacockii str. Rustic hypothetical protein YP_002916971.1 1264679 R 562019 CDS YP_002916972.1 238651114 7942135 complement(1265405..1266169) 1 NC_012730.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I; beta-lactamase superfamily hydrolase 1266169 7942135 RPR_07605 Rickettsia peacockii str. Rustic beta-lactamase superfamily hydrolase YP_002916972.1 1265405 R 562019 CDS YP_002916973.1 238651115 7942136 1266184..1266828 1 NC_012730.1 COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 1266828 7942136 RPR_07610 Rickettsia peacockii str. Rustic hypothetical protein YP_002916973.1 1266184 D 562019 CDS YP_002916974.1 238651116 7942137 1266922..1267185 1 NC_012730.1 COG3077 DNA-damage-inducible protein J; DNA-damage-inducible protein J 1267185 7942137 RPR_07615 Rickettsia peacockii str. Rustic DNA-damage-inducible protein J YP_002916974.1 1266922 D 562019 CDS YP_002916975.1 238651117 7942138 1267525..1268634 1 NC_012730.1 COG0795 Predicted permeases; hypothetical protein 1268634 7942138 RPR_07620 Rickettsia peacockii str. Rustic hypothetical protein YP_002916975.1 1267525 D 562019 CDS YP_002916976.1 238651118 7942139 complement(1268640..1269104) 1 NC_012730.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 1269104 7942139 RPR_07625 Rickettsia peacockii str. Rustic DNA polymerase III subunit chi YP_002916976.1 1268640 R 562019 CDS YP_002916977.1 238651119 7942141 complement(1269300..1270445) 1 NC_012730.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1270445 7942141 RPR_07630 Rickettsia peacockii str. Rustic succinyl-diaminopimelate desuccinylase YP_002916977.1 1269300 R 562019 CDS YP_002916978.1 238651120 7942142 complement(1270449..1271384) 1 NC_012730.1 COG0732 Restriction endonuclease S subunits; putative type I restriction enzyme S subunit 1271384 7942142 RPR_07635 Rickettsia peacockii str. Rustic putative type I restriction enzyme S subunit YP_002916978.1 1270449 R 562019 CDS YP_002916979.1 238651121 7942143 complement(1274205..1274720) 1 NC_012730.1 COG1434 Uncharacterized conserved protein; hypothetical protein 1274720 7942143 RPR_07675 Rickettsia peacockii str. Rustic hypothetical protein YP_002916979.1 1274205 R 562019 CDS YP_002916980.1 238651122 7942144 complement(1274717..1275346) 1 NC_012730.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1275346 lipB 7942144 lipB Rickettsia peacockii str. Rustic lipoate-protein ligase B YP_002916980.1 1274717 R 562019 CDS YP_002916981.1 238651123 7942145 complement(1275343..1276086) 1 NC_012730.1 COG3023 Negative regulator of beta-lactamase expression; N-acetylmuramoyl-L-alanine amidase 1276086 7942145 RPR_07685 Rickettsia peacockii str. Rustic N-acetylmuramoyl-L-alanine amidase YP_002916981.1 1275343 R 562019 CDS YP_002916982.1 238651124 7942147 complement(1276583..1276918) 1 NC_012730.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1276918 rpsP 7942147 rpsP Rickettsia peacockii str. Rustic 30S ribosomal protein S16 YP_002916982.1 1276583 R 562019 CDS YP_002916983.1 238651125 7942148 complement(1276935..1277105) 1 NC_012730.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1277105 rpmG 7942148 rpmG Rickettsia peacockii str. Rustic 50S ribosomal protein L33 YP_002916983.1 1276935 R 562019 CDS YP_002916984.1 238651126 7942149 complement(1277326..1279158) 1 NC_012730.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 1279158 mutL 7942149 mutL Rickettsia peacockii str. Rustic DNA mismatch repair protein YP_002916984.1 1277326 R 562019 CDS YP_002916985.1 238651127 7942150 complement(1281453..1282142) 1 NC_012730.1 COG0457 FOG: TPR repeat; TPR repeat-containing protein 1282142 7942150 RPR_07730 Rickettsia peacockii str. Rustic TPR repeat-containing protein YP_002916985.1 1281453 R 562019 CDS YP_002916986.1 238651128 7942151 1282279..1283553 1 NC_012730.1 COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter 1283553 7942151 RPR_07735 Rickettsia peacockii str. Rustic proline/betaine transporter YP_002916986.1 1282279 D 562019 CDS YP_002916987.1 238651129 7942152 1283537..1284376 1 NC_012730.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1284376 7942152 RPR_07740 Rickettsia peacockii str. Rustic coproporphyrinogen III oxidase YP_002916987.1 1283537 D 562019 CDS YP_002916988.1 238651130 7942153 complement(1285611..1286048) 1 NC_012730.1 COG1981 Predicted membrane protein; hypothetical protein 1286048 7942153 RPR_07755 Rickettsia peacockii str. Rustic hypothetical protein YP_002916988.1 1285611 R 562019 CDS YP_002916989.1 238651131 7942154 complement(1286060..1287100) 1 NC_012730.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1287100 hemH 7942154 hemH Rickettsia peacockii str. Rustic ferrochelatase YP_002916989.1 1286060 R 562019 CDS YP_002916990.1 238651132 7942155 complement(1287057..1288097) 1 NC_012730.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1288097 hemE 7942155 hemE Rickettsia peacockii str. Rustic uroporphyrinogen decarboxylase YP_002916990.1 1287057 R 562019 CDS YP_002921997.1 238651160 7942982 601..1332 1 NC_012732.1 COG1192 ATPases involved in chromosome partitioning; plasmid stability protein ParA 1332 7942982 RPR_p01 Rickettsia peacockii str. Rustic plasmid stability protein ParA YP_002921997.1 601 D 562019 CDS YP_002921998.1 238651161 7942963 1335..1583 1 NC_012732.1 hypothetical protein 1583 7942963 RPR_p02 Rickettsia peacockii str. Rustic hypothetical protein YP_002921998.1 1335 D 562019 CDS YP_002921999.1 238651162 7942964 1598..2023 1 NC_012732.1 hypothetical protein 2023 7942964 RPR_p03 Rickettsia peacockii str. Rustic hypothetical protein YP_002921999.1 1598 D 562019 CDS YP_002922000.1 238651163 7942965 2771..5110 1 NC_012732.1 COG0593 ATPase involved in DNA replication initiation; DnaA-like protein 5110 7942965 RPR_p04 Rickettsia peacockii str. Rustic DnaA-like protein YP_002922000.1 2771 D 562019 CDS YP_002922001.1 238651164 7942966 6542..7636 1 NC_012732.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 7636 7942966 RPR_p05 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002922001.1 6542 D 562019 CDS YP_002922002.1 238651165 7942967 complement(7673..8290) 1 NC_012732.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; hypothetical protein 8290 7942967 RPR_p06 Rickettsia peacockii str. Rustic hypothetical protein YP_002922002.1 7673 R 562019 CDS YP_002922003.1 238651166 7942968 complement(8287..9420) 1 NC_012732.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit; putative phenylpropionate dioxygenase 9420 7942968 RPR_p07 Rickettsia peacockii str. Rustic putative phenylpropionate dioxygenase YP_002922003.1 8287 R 562019 CDS YP_002922004.1 238651167 7942969 complement(9608..10375) 1 NC_012732.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase/reductase family oxidoreductase 10375 7942969 RPR_p08 Rickettsia peacockii str. Rustic short chain dehydrogenase/reductase family oxidoreductase YP_002922004.1 9608 R 562019 CDS YP_002922005.1 238651168 7942970 complement(10402..11364) 1 NC_012732.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase III 11364 7942970 RPR_p09 Rickettsia peacockii str. Rustic 3-oxoacyl-ACP synthase III YP_002922005.1 10402 R 562019 CDS YP_002922006.1 238651169 7942971 12066..12290 1 NC_012732.1 COG0236 Acyl carrier protein; hypothetical protein 12290 7942971 RPR_p10 Rickettsia peacockii str. Rustic hypothetical protein YP_002922006.1 12066 D 562019 CDS YP_002922007.1 238651170 7942972 12513..14279 1 NC_012732.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC transporter 14279 7942972 RPR_p11 Rickettsia peacockii str. Rustic ABC transporter YP_002922007.1 12513 D 562019 CDS YP_002922008.1 238651171 7942973 15813..16340 1 NC_012732.1 COG0071 Molecular chaperone (small heat shock protein); small heat shock protein 16340 7942973 RPR_p12 Rickettsia peacockii str. Rustic small heat shock protein YP_002922008.1 15813 D 562019 CDS YP_002922009.1 238651172 7942974 16422..16886 1 NC_012732.1 COG0071 Molecular chaperone (small heat shock protein); small heat shock protein 16886 7942974 RPR_p13 Rickettsia peacockii str. Rustic small heat shock protein YP_002922009.1 16422 D 562019 CDS YP_002922010.1 238651173 7942975 17189..18103 1 NC_012732.1 COG5464 Uncharacterized conserved protein, transposase like; hypothetical protein 18103 7942975 RPR_p14 Rickettsia peacockii str. Rustic hypothetical protein YP_002922010.1 17189 D 562019 CDS YP_002922011.1 238651174 7942976 complement(18158..19252) 1 NC_012732.1 COG2801 Transposase and inactivated derivatives; transposase ISRpe1 19252 7942976 RPR_p15 Rickettsia peacockii str. Rustic transposase ISRpe1 YP_002922011.1 18158 R 562019 CDS YP_002922012.1 238651175 7942977 complement(21210..21569) 1 NC_012732.1 putative lipoprotein; hypothetical protein 21569 7942977 RPR_p16 Rickettsia peacockii str. Rustic hypothetical protein YP_002922012.1 21210 R 562019 CDS YP_002922013.1 238651176 7942978 complement(22268..22609) 1 NC_012732.1 COG2076 Membrane transporters of cations and cationic drugs; SMR-type multi-drug efflux transporter 22609 7942978 RPR_p17 Rickettsia peacockii str. Rustic SMR-type multi-drug efflux transporter YP_002922013.1 22268 R 562019 CDS YP_002922014.1 238651177 7942979 complement(22652..23170) 1 NC_012732.1 COG0457 FOG: TPR repeat; TPR repeat-containing protein 23170 7942979 RPR_p18 Rickettsia peacockii str. Rustic TPR repeat-containing protein YP_002922014.1 22652 R 562019 CDS YP_002922015.1 238651178 7942980 complement(23382..24794) 1 NC_012732.1 only 5' half of CDS has similarity to part of Sca4 producing apparent chimeric protein; hypothetical protein 24794 7942980 RPR_p19 Rickettsia peacockii str. Rustic hypothetical protein YP_002922015.1 23382 R 562019 CDS YP_002922016.1 238651179 7942981 complement(24972..26018) 1 NC_012732.1 COG0419 ATPase involved in DNA repair, truncated relative to rickettsial homologs; hypothetical protein 26018 7942981 RPR_p20 Rickettsia peacockii str. Rustic hypothetical protein YP_002922016.1 24972 R 562019 CDS