-- dump date 20140620_033804 -- class Genbank::CDS -- table cds_note -- id note YP_004763714.1 COG1806 Uncharacterized protein conserved in bacteria YP_004763715.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004763716.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_004763717.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_004763718.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_004763719.1 COG2337 Growth inhibitor YP_004763720.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_004763721.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_004763722.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_004763726.1 COG0666 FOG: Ankyrin repeat YP_004763727.1 COG0042 tRNA-dihydrouridine synthase YP_004763728.1 COG0726 Predicted xylanase/chitin deacetylase YP_004763729.1 COG0802 Predicted ATPase or kinase YP_004763730.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_004763731.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_004763733.1 COG0658 Predicted membrane metal-binding protein YP_004763741.1 COG0711 F0F1-type ATP synthase, subunit b YP_004763742.1 COG0711 F0F1-type ATP synthase, subunit b YP_004763743.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_004763744.1 COG0356 F0F1-type ATP synthase, subunit a YP_004763745.1 COG5336 Uncharacterized protein conserved in bacteria YP_004763746.1 COG1651 Protein-disulfide isomerase YP_004763747.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD YP_004763748.1 COG0500 SAM-dependent methyltransferases YP_004763750.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_004763751.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_004763752.1 COG0262 Dihydrofolate reductase YP_004763753.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_004763759.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_004763760.1 COG1678 Putative transcriptional regulator YP_004763761.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_004763775.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004763777.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_004763778.1 COG1398 Fatty-acid desaturase YP_004763779.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004763781.1 COG0360 Ribosomal protein S6 YP_004763782.1 COG0238 Ribosomal protein S18 YP_004763783.1 COG0359 Ribosomal protein L9 YP_004763784.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_004763785.1 COG0465 ATP-dependent Zn proteases YP_004763787.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_004763788.1 COG3755 Uncharacterized protein conserved in bacteria YP_004763790.1 COG1565 Uncharacterized conserved protein YP_004763791.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_004763792.1 COG0668 Small-conductance mechanosensitive channel YP_004763793.1 COG0706 Preprotein translocase subunit YidC YP_004763794.1 COG0558 Phosphatidylglycerophosphate synthase YP_004763799.1 COG0242 N-formylmethionyl-tRNA deformylase YP_004763800.1 COG3202 ATP/ADP translocase YP_004763801.1 COG2271 Sugar phosphate permease YP_004763802.1 COG0105 Nucleoside diphosphate kinase YP_004763803.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_004763804.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_004763805.1 COG1192 ATPases involved in chromosome partitioning YP_004763806.1 COG1475 Predicted transcriptional regulators YP_004763807.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004763809.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_004763813.1 COG0316 Uncharacterized conserved protein YP_004763815.1 COG0232 dGTP triphosphohydrolase YP_004763816.1 COG0018 Arginyl-tRNA synthetase YP_004763818.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_004763820.1 COG0717 Deoxycytidine deaminase YP_004763821.1 COG1952 Preprotein translocase subunit SecB YP_004763822.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004763823.1 COG2904 Uncharacterized protein conserved in bacteria YP_004763824.1 COG3820 Uncharacterized protein conserved in bacteria YP_004763825.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_004763826.1 COG3047 Outer membrane protein W YP_004763827.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_004763828.1 COG0477 Permeases of the major facilitator superfamily YP_004763831.1 COG1738 Uncharacterized conserved protein YP_004763833.1 COG0215 Cysteinyl-tRNA synthetase YP_004763834.1 COG0052 Ribosomal protein S2 YP_004763835.1 COG0264 Translation elongation factor Ts YP_004763838.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_004763839.1 COG2121 Uncharacterized protein conserved in bacteria YP_004763840.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_004763841.1 COG4115 Uncharacterized protein conserved in bacteria YP_004763842.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_004763843.1 COG0457 FOG: TPR repeat YP_004763844.1 COG2853 Surface lipoprotein YP_004763845.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_004763846.1 COG0787 Alanine racemase YP_004763847.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_004763848.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_004763852.1 COG1871 Chemotaxis protein; stimulates methylation of MCP proteins YP_004763853.1 COG0227 Ribosomal protein L28 YP_004763854.1 COG0254 Ribosomal protein L31 YP_004763855.1 COG0218 Predicted GTPase YP_004763856.1 COG0548 Acetylglutamate kinase YP_004763857.1 COG3702 Type IV secretory pathway, VirB3 components YP_004763858.1 COG3451 Type IV secretory pathway, VirB4 components YP_004763859.1 COG3704 Type IV secretory pathway, VirB6 components YP_004763860.1 COG3704 Type IV secretory pathway, VirB6 components YP_004763861.1 COG3704 Type IV secretory pathway, VirB6 components YP_004763862.1 COG3704 Type IV secretory pathway, VirB6 components YP_004763866.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_004763868.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_004763869.1 COG0335 Ribosomal protein L19 YP_004763870.1 COG3750 Uncharacterized protein conserved in bacteria YP_004763871.1 COG0341 Preprotein translocase subunit SecF YP_004763872.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_004763873.1 COG0681 Signal peptidase I YP_004763874.1 COG0571 dsRNA-specific ribonuclease YP_004763875.1 COG1159 GTPase YP_004763876.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_004763877.1 COG0565 rRNA methylase YP_004763879.1 COG1708 Predicted nucleotidyltransferases YP_004763880.1 COG3660 Predicted nucleoside-diphosphate-sugar epimerase YP_004763881.1 COG0489 ATPases involved in chromosome partitioning YP_004763882.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004763883.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004763884.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004763885.1 COG1054 Predicted sulfurtransferase YP_004763886.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_004763888.1 COG2142 Succinate dehydrogenase, hydrophobic anchor subunit YP_004763889.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_004763890.1 COG0765 ABC-type amino acid transport system, permease component YP_004763891.1 COG0048 Ribosomal protein S12 YP_004763892.1 COG0049 Ribosomal protein S7 YP_004763893.1 COG0480 Translation elongation factors (GTPases) YP_004763894.1 COG0690 Preprotein translocase subunit SecE YP_004763895.1 COG0250 Transcription antiterminator YP_004763896.1 COG0080 Ribosomal protein L11 YP_004763897.1 COG0081 Ribosomal protein L1 YP_004763898.1 COG0244 Ribosomal protein L10 YP_004763899.1 COG0222 Ribosomal protein L7/L12 YP_004763900.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_004763901.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_004763903.1 COG0260 Leucyl aminopeptidase YP_004763904.1 COG1192 ATPases involved in chromosome partitioning YP_004763906.1 COG0173 Aspartyl-tRNA synthetase YP_004763908.1 COG0670 Integral membrane protein, interacts with FtsH YP_004763909.1 COG0289 Dihydrodipicolinate reductase YP_004763910.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_004763911.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_004763912.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_004763913.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_004763914.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_004763915.1 COG0233 Ribosome recycling factor YP_004763916.1 COG0528 Uridylate kinase YP_004763917.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_004763918.1 COG0477 Permeases of the major facilitator superfamily YP_004763919.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_004763921.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_004763922.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_004763923.1 COG0781 Transcription termination factor YP_004763924.1 COG0293 23S rRNA methylase YP_004763927.1 COG2867 Oligoketide cyclase/lipid transport protein YP_004763928.1 COG5508 Uncharacterized conserved small protein YP_004763929.1 COG1385 Uncharacterized protein conserved in bacteria YP_004763930.1 COG2155 Uncharacterized conserved protein YP_004763931.1 COG0841 Cation/multidrug efflux pump YP_004763932.1 COG0776 Bacterial nucleoid DNA-binding protein YP_004763933.1 COG0470 ATPase involved in DNA replication YP_004763934.1 COG0541 Signal recognition particle GTPase YP_004763936.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_004763942.1 COG1301 Na+/H+-dicarboxylate symporters YP_004763943.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_004763944.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_004763945.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004763946.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_004763947.1 COG2317 Zn-dependent carboxypeptidase YP_004763948.1 COG0497 ATPase involved in DNA repair YP_004763949.1 COG4105 DNA uptake lipoprotein YP_004763950.1 COG4572 Putative cation transport regulator YP_004763951.1 COG4572 Putative cation transport regulator YP_004763952.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_004763953.1 COG0443 Molecular chaperone YP_004763954.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004763958.1 COG1466 DNA polymerase III, delta subunit YP_004763959.1 COG2941 Ubiquinone biosynthesis protein COQ7 YP_004763961.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_004763964.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_004763966.1 COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC YP_004763978.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_004763979.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component YP_004763981.1 COG0633 Ferredoxin YP_004763982.1 COG0443 Molecular chaperone YP_004763983.1 COG1076 DnaJ-domain-containing proteins 1 YP_004763984.1 COG0164 Ribonuclease HII YP_004763985.1 COG0556 Helicase subunit of the DNA excision repair complex YP_004763986.1 COG0695 Glutaredoxin and related proteins YP_004763987.1 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components YP_004763989.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_004763993.1 COG1301 Na+/H+-dicarboxylate symporters YP_004763997.1 COG0242 N-formylmethionyl-tRNA deformylase YP_004763998.1 COG0223 Methionyl-tRNA formyltransferase YP_004764000.1 COG1485 Predicted ATPase YP_004764002.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_004764003.1 COG0666 FOG: Ankyrin repeat YP_004764004.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004764006.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_004764007.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_004764008.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_004764009.1 COG4115 Uncharacterized protein conserved in bacteria YP_004764010.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004764011.1 COG0612 Predicted Zn-dependent peptidases YP_004764012.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_004764014.1 COG0441 Threonyl-tRNA synthetase YP_004764016.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004764017.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004764018.1 COG5595 Zn-ribbon-containing, possibly nucleic-acid-binding protein YP_004764022.1 COG0840 Methyl-accepting chemotaxis protein YP_004764024.1 COG1538 Outer membrane protein YP_004764025.1 COG3827 Uncharacterized protein conserved in bacteria YP_004764027.1 COG0666 FOG: Ankyrin repeat YP_004764028.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_004764029.1 COG0793 Periplasmic protease YP_004764030.1 COG0642 Signal transduction histidine kinase YP_004764031.1 COG1729 Uncharacterized protein conserved in bacteria YP_004764033.1 COG1520 FOG: WD40-like repeat YP_004764034.1 COG0102 Ribosomal protein L13 YP_004764035.1 COG0103 Ribosomal protein S9 YP_004764036.1 COG2173 D-alanyl-D-alanine dipeptidase YP_004764037.1 COG2173 D-alanyl-D-alanine dipeptidase YP_004764038.1 COG2154 Pterin-4a-carbinolamine dehydratase YP_004764041.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004764042.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_004764043.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_004764044.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_004764046.1 COG0688 Phosphatidylserine decarboxylase YP_004764047.1 COG1183 Phosphatidylserine synthase YP_004764048.1 COG1566 Multidrug resistance efflux pump YP_004764052.1 COG0271 Stress-induced morphogen (activity unknown) YP_004764053.1 COG2200 FOG: EAL domain YP_004764054.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_004764055.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_004764056.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_004764057.1 COG1589 Cell division septal protein YP_004764058.1 COG0849 Actin-like ATPase involved in cell division YP_004764060.1 COG3474 Cytochrome c2 YP_004764062.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_004764064.1 COG1530 Ribonucleases G and E YP_004764065.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_004764066.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004764067.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_004764068.1 COG0708 Exonuclease III YP_004764069.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_004764070.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_004764071.1 COG1217 Predicted membrane GTPase involved in stress response YP_004764074.1 COG2825 Outer membrane protein YP_004764075.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_004764076.1 COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit YP_004764077.1 COG1563 Predicted subunit of the Multisubunit Na+/H+ antiporter YP_004764080.1 COG0723 Rieske Fe-S protein YP_004764081.1 COG1290 Cytochrome b subunit of the bc complex YP_004764082.1 COG2827 Predicted endonuclease containing a URI domain YP_004764083.1 COG2857 Cytochrome c1 YP_004764084.1 COG0071 Molecular chaperone (small heat shock protein) YP_004764086.1 COG4804 Uncharacterized conserved protein YP_004764087.1 COG1186 Protein chain release factor B YP_004764088.1 COG0481 Membrane GTPase LepA YP_004764091.1 COG3093 Plasmid maintenance system antidote protein YP_004764097.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_004764099.1 COG0772 Bacterial cell division membrane protein YP_004764100.1 COG1770 Protease II YP_004764101.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_004764102.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_004764104.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_004764105.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_004764106.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_004764107.1 COG3504 Type IV secretory pathway, VirB9 components YP_004764108.1 COG3736 Type IV secretory pathway, component VirB8 YP_004764110.1 COG3736 Type IV secretory pathway, component VirB8 YP_004764111.1 COG3504 Type IV secretory pathway, VirB9 components YP_004764112.1 COG2948 Type IV secretory pathway, VirB10 components YP_004764113.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis YP_004764114.1 COG3505 Type IV secretory pathway, VirD4 components YP_004764115.1 COG0248 Exopolyphosphatase YP_004764119.1 COG4695 Phage-related protein YP_004764123.1 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase YP_004764124.1 COG0249 Mismatch repair ATPase (MutS family) YP_004764125.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_004764126.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004764127.1 COG1451 Predicted metal-dependent hydrolase YP_004764128.1 COG1351 Predicted alternative thymidylate synthase YP_004764129.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004764130.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004764131.1 COG3175 Cytochrome oxidase assembly factor YP_004764133.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_004764134.1 COG0531 Amino acid transporters YP_004764135.1 COG0124 Histidyl-tRNA synthetase YP_004764136.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004764139.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_004764140.1 COG0457 FOG: TPR repeat YP_004764143.1 COG0811 Biopolymer transport proteins YP_004764144.1 COG0848 Biopolymer transport protein YP_004764147.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_004764148.1 COG0477 Permeases of the major facilitator superfamily YP_004764149.1 COG0845 Membrane-fusion protein YP_004764150.1 COG4618 ABC-type protease/lipase transport system, ATPase and permease components YP_004764151.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_004764152.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_004764155.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_004764156.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_004764159.1 COG0763 Lipid A disaccharide synthetase YP_004764161.1 COG1559 Predicted periplasmic solute-binding protein YP_004764162.1 COG1965 Protein implicated in iron transport, frataxin homolog YP_004764167.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_004764168.1 COG0550 Topoisomerase IA YP_004764170.1 COG0450 Peroxiredoxin YP_004764171.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004764172.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_004764173.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase YP_004764174.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_004764175.1 COG3093 Plasmid maintenance system antidote protein YP_004764176.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_004764177.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases YP_004764178.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_004764180.1 COG0500 SAM-dependent methyltransferases YP_004764182.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004764183.1 COG0845 Membrane-fusion protein YP_004764185.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004764186.1 COG0438 Glycosyltransferase YP_004764189.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_004764190.1 COG0522 Ribosomal protein S4 and related proteins YP_004764191.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_004764192.1 COG1533 DNA repair photolyase YP_004764194.1 COG0457 FOG: TPR repeat YP_004764195.1 COG2982 Uncharacterized protein involved in outer membrane biogenesis YP_004764196.1 COG0806 RimM protein, required for 16S rRNA processing YP_004764198.1 COG1722 Exonuclease VII small subunit YP_004764200.1 COG2094 3-methyladenine DNA glycosylase YP_004764201.1 COG0759 Uncharacterized conserved protein YP_004764202.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_004764203.1 COG2827 Predicted endonuclease containing a URI domain YP_004764204.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_004764205.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_004764206.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_004764207.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_004764208.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_004764209.1 COG4765 Uncharacterized protein conserved in bacteria YP_004764210.1 COG4974 Site-specific recombinase XerD YP_004764213.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_004764214.1 COG0815 Apolipoprotein N-acyltransferase YP_004764216.1 COG3023 Negative regulator of beta-lactamase expression YP_004764217.1 COG2984 ABC-type uncharacterized transport system, periplasmic component YP_004764218.1 COG4120 ABC-type uncharacterized transport system, permease component YP_004764219.1 COG1101 ABC-type uncharacterized transport system, ATPase component YP_004764221.1 COG0666 FOG: Ankyrin repeat YP_004764222.1 COG0666 FOG: Ankyrin repeat YP_004764223.1 COG0666 FOG: Ankyrin repeat YP_004764224.1 COG1495 Disulfide bond formation protein DsbB YP_004764225.1 COG1384 Lysyl-tRNA synthetase (class I) YP_004764226.1 COG0679 Predicted permeases YP_004764227.1 COG0281 Malic enzyme YP_004764229.1 COG4374 Uncharacterized protein conserved in bacteria YP_004764230.1 COG2002 Regulators of stationary/sporulation gene expression YP_004764231.1 COG0477 Permeases of the major facilitator superfamily YP_004764234.1 COG0541 Signal recognition particle GTPase YP_004764238.1 COG0039 Malate/lactate dehydrogenases YP_004764241.1 COG3202 ATP/ADP translocase YP_004764242.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_004764243.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_004764245.1 COG1051 ADP-ribose pyrophosphatase YP_004764247.1 COG0302 GTP cyclohydrolase I YP_004764248.1 COG0442 Prolyl-tRNA synthetase YP_004764249.1 COG3177 Uncharacterized conserved protein YP_004764251.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_004764255.1 COG2255 Holliday junction resolvasome, helicase subunit YP_004764256.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004764257.1 COG0477 Permeases of the major facilitator superfamily YP_004764258.1 COG1686 D-alanyl-D-alanine carboxypeptidase YP_004764259.1 COG0797 Lipoproteins YP_004764260.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_004764261.1 COG2917 Intracellular septation protein A YP_004764262.1 COG0672 High-affinity Fe2+/Pb2+ permease YP_004764264.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_004764265.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_004764266.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004764267.1 COG0616 Periplasmic serine proteases (ClpP class) YP_004764268.1 COG0756 dUTPase YP_004764269.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_004764271.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_004764272.1 COG2887 RecB family exonuclease YP_004764274.1 COG2071 Predicted glutamine amidotransferases YP_004764275.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_004764276.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_004764277.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_004764278.1 COG0615 Cytidylyltransferase YP_004764279.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004764280.1 COG0597 Lipoprotein signal peptidase YP_004764282.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_004764283.1 COG0772 Bacterial cell division membrane protein YP_004764284.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_004764289.1 COG0841 Cation/multidrug efflux pump YP_004764290.1 COG0841 Cation/multidrug efflux pump YP_004764291.1 COG0841 Cation/multidrug efflux pump YP_004764292.1 COG0841 Cation/multidrug efflux pump YP_004764293.1 COG0841 Cation/multidrug efflux pump YP_004764295.1 COG1538 Outer membrane protein YP_004764296.1 COG0438 Glycosyltransferase YP_004764298.1 COG0253 Diaminopimelate epimerase YP_004764299.1 COG0621 2-methylthioadenine synthetase YP_004764300.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_004764301.1 COG0073 EMAP domain YP_004764302.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_004764305.1 COG0495 Leucyl-tRNA synthetase YP_004764307.1 COG0349 Ribonuclease D YP_004764308.1 COG2919 Septum formation initiator YP_004764309.1 COG0575 CDP-diglyceride synthetase YP_004764310.1 COG0020 Undecaprenyl pyrophosphate synthase YP_004764311.1 COG0642 Signal transduction histidine kinase YP_004764312.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004764313.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_004764314.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_004764315.1 COG0691 tmRNA-binding protein YP_004764316.1 COG1651 Protein-disulfide isomerase YP_004764317.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_004764318.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_004764319.1 COG2002 Regulators of stationary/sporulation gene expression YP_004764321.1 COG3038 Cytochrome B561 YP_004764322.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_004764323.1 COG4395 Uncharacterized protein conserved in bacteria YP_004764326.1 COG0858 Ribosome-binding factor A YP_004764327.1 COG1238 Predicted membrane protein YP_004764328.1 COG1714 Predicted membrane protein/domain YP_004764329.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_004764330.1 COG0061 Predicted sugar kinase YP_004764331.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_004764332.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_004764334.1 COG0679 Predicted permeases YP_004764335.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004764336.1 COG0492 Thioredoxin reductase YP_004764339.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004764340.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004764341.1 COG0210 Superfamily I DNA and RNA helicases YP_004764343.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_004764345.1 COG1171 Threonine dehydratase YP_004764346.1 COG0466 ATP-dependent Lon protease, bacterial type YP_004764350.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_004764351.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_004764352.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_004764353.1 COG0492 Thioredoxin reductase YP_004764355.1 COG3121 P pilus assembly protein, chaperone PapD YP_004764356.1 COG5430 Uncharacterized secreted protein YP_004764359.1 COG0209 Ribonucleotide reductase, alpha subunit YP_004764361.1 COG0208 Ribonucleotide reductase, beta subunit YP_004764362.1 COG1357 Uncharacterized low-complexity proteins YP_004764365.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_004764367.1 COG1109 Phosphomannomutase YP_004764368.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_004764369.1 COG1934 Uncharacterized protein conserved in bacteria YP_004764370.1 COG5375 Uncharacterized protein conserved in bacteria YP_004764371.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_004764372.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_004764373.1 COG0184 Ribosomal protein S15P/S13E YP_004764374.1 COG0130 Pseudouridine synthase YP_004764375.1 COG3202 ATP/ADP translocase YP_004764377.1 COG1396 Predicted transcriptional regulators YP_004764378.1 COG1295 Predicted membrane protein YP_004764379.1 COG0174 Glutamine synthetase YP_004764380.1 COG1496 Uncharacterized conserved protein YP_004764381.1 COG0242 N-formylmethionyl-tRNA deformylase YP_004764382.1 COG4118 Antitoxin of toxin-antitoxin stability system YP_004764385.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_004764386.1 COG0625 Glutathione S-transferase YP_004764387.1 COG4285 Uncharacterized conserved protein YP_004764388.1 COG1268 Uncharacterized conserved protein YP_004764389.1 COG0285 Folylpolyglutamate synthase YP_004764391.1 COG0605 Superoxide dismutase YP_004764392.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase YP_004764395.1 COG5448 Uncharacterized conserved protein YP_004764396.1 COG5449 Uncharacterized conserved protein YP_004764398.1 COG5346 Predicted membrane protein YP_004764399.1 COG0290 Translation initiation factor 3 (IF-3) YP_004764400.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004764401.1 COG0216 Protein chain release factor A YP_004764402.1 COG0608 Single-stranded DNA-specific exonuclease YP_004764403.1 COG0500 SAM-dependent methyltransferases YP_004764404.1 COG1158 Transcription termination factor YP_004764405.1 COG0616 Periplasmic serine proteases (ClpP class) YP_004764406.1 COG0776 Bacterial nucleoid DNA-binding protein YP_004764409.1 COG3022 Uncharacterized protein conserved in bacteria YP_004764411.1 COG1396 Predicted transcriptional regulators YP_004764412.1 COG0283 Cytidylate kinase YP_004764413.1 COG0539 Ribosomal protein S1 YP_004764414.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_004764416.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_004764418.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_004764419.1 COG0217 Uncharacterized conserved protein YP_004764423.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_004764428.1 COG0338 Site-specific DNA methylase YP_004764431.1 COG0500 SAM-dependent methyltransferases YP_004764432.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_004764433.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_004764435.1 COG0349 Ribonuclease D YP_004764436.1 COG1723 Uncharacterized conserved protein YP_004764437.1 COG0354 Predicted aminomethyltransferase related to GcvT YP_004764440.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_004764441.1 COG0181 Porphobilinogen deaminase YP_004764445.1 COG0180 Tryptophanyl-tRNA synthetase YP_004764446.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004764447.1 COG5622 Protein required for attachment to host cells YP_004764449.1 COG3077 DNA-damage-inducible protein J YP_004764450.1 COG2945 Predicted hydrolase of the alpha/beta superfamily YP_004764451.1 COG2956 Predicted N-acetylglucosaminyl transferase YP_004764453.1 COG1587 Uroporphyrinogen-III synthase YP_004764454.1 COG1279 Lysine efflux permease YP_004764455.1 COG0477 Permeases of the major facilitator superfamily YP_004764458.1 COG3202 ATP/ADP translocase YP_004764460.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_004764461.1 COG0006 Xaa-Pro aminopeptidase YP_004764462.1 COG0531 Amino acid transporters YP_004764463.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004764466.1 COG0316 Uncharacterized conserved protein YP_004764467.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_004764468.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_004764469.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_004764470.1 COG1959 Predicted transcriptional regulator YP_004764476.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_004764478.1 COG0113 Delta-aminolevulinic acid dehydratase YP_004764480.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_004764481.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_004764483.1 COG0305 Replicative DNA helicase YP_004764485.1 COG0814 Amino acid permeases YP_004764486.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_004764487.1 COG1357 Uncharacterized low-complexity proteins YP_004764488.1 COG0742 N6-adenine-specific methylase YP_004764489.1 COG1066 Predicted ATP-dependent serine protease YP_004764490.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_004764491.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_004764492.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_004764493.1 COG1129 ABC-type sugar transport system, ATPase component YP_004764494.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_004764495.1 COG0195 Transcription elongation factor YP_004764496.1 COG0779 Uncharacterized protein conserved in bacteria YP_004764499.1 COG1959 Predicted transcriptional regulator YP_004764500.1 COG1189 Predicted rRNA methylase YP_004764501.1 COG0162 Tyrosyl-tRNA synthetase YP_004764503.1 COG5304 Uncharacterized protein conserved in bacteria YP_004764506.1 COG3547 Transposase and inactivated derivatives YP_004764510.1 COG1672 Predicted ATPase (AAA+ superfamily) YP_004764511.1 COG0477 Permeases of the major facilitator superfamily YP_004764512.1 COG0477 Permeases of the major facilitator superfamily YP_004764513.1 COG0671 Membrane-associated phospholipid phosphatase YP_004764514.1 COG2373 Large extracellular alpha-helical protein YP_004764516.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_004764517.1 COG1040 Predicted amidophosphoribosyltransferases YP_004764521.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004764522.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_004764523.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004764524.1 COG1357 Uncharacterized low-complexity proteins YP_004764526.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_004764529.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_004764531.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_004764532.1 COG2001 Uncharacterized protein conserved in bacteria YP_004764534.1 COG0591 Na+/proline symporter YP_004764537.1 COG0322 Nuclease subunit of the excinuclease complex YP_004764538.1 COG2847 Uncharacterized protein conserved in bacteria YP_004764539.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_004764543.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_004764549.1 COG0642 Signal transduction histidine kinase YP_004764551.1 COG0666 FOG: Ankyrin repeat YP_004764552.1 COG0666 FOG: Ankyrin repeat YP_004764561.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_004764562.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_004764563.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_004764564.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_004764565.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_004764566.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_004764567.1 COG0647 Predicted sugar phosphatases of the HAD superfamily YP_004764568.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_004764572.1 COG0477 Permeases of the major facilitator superfamily YP_004764573.1 COG4710 Predicted DNA-binding protein with an HTH domain YP_004764575.1 COG1862 Preprotein translocase subunit YajC YP_004764576.1 COG0342 Preprotein translocase subunit SecD YP_004764577.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_004764578.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_004764579.1 COG0221 Inorganic pyrophosphatase YP_004764580.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_004764583.1 COG1200 RecG-like helicase YP_004764584.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_004764585.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_004764586.1 COG0655 Multimeric flavodoxin WrbA YP_004764588.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_004764589.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_004764590.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_004764591.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_004764592.1 COG2938 Uncharacterized conserved protein YP_004764593.1 COG0607 Rhodanese-related sulfurtransferase YP_004764594.1 COG0593 ATPase involved in DNA replication initiation YP_004764600.1 COG3621 Patatin YP_004764601.1 COG0477 Permeases of the major facilitator superfamily YP_004764602.1 COG2250 Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN YP_004764604.1 COG0012 Predicted GTPase, probable translation factor YP_004764606.1 COG0193 Peptidyl-tRNA hydrolase YP_004764607.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_004764610.1 COG0602 Organic radical activating enzymes YP_004764611.1 COG0291 Ribosomal protein L35 YP_004764612.1 COG0292 Ribosomal protein L20 YP_004764613.1 COG0230 Ribosomal protein L34 YP_004764615.1 COG0666 FOG: Ankyrin repeat YP_004764620.1 COG3173 Predicted aminoglycoside phosphotransferase YP_004764621.1 COG3173 Predicted aminoglycoside phosphotransferase YP_004764622.1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_004764623.1 COG0828 Ribosomal protein S21 YP_004764624.1 COG5590 Uncharacterized conserved protein YP_004764629.1 COG0060 Isoleucyl-tRNA synthetase YP_004764632.1 COG0457 FOG: TPR repeat YP_004764634.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_004764635.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_004764637.1 COG0477 Permeases of the major facilitator superfamily YP_004764638.1 COG3070 Regulator of competence-specific genes YP_004764639.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_004764640.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_004764641.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_004764642.1 COG5342 Invasion protein B, involved in pathogenesis YP_004764645.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_004764646.1 COG0459 Chaperonin GroEL (HSP60 family) YP_004764647.1 COG0234 Co-chaperonin GroES (HSP10) YP_004764649.1 COG0689 RNase PH YP_004764651.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_004764652.1 COG0628 Predicted permease YP_004764653.1 COG0593 ATPase involved in DNA replication initiation YP_004764654.1 COG0477 Permeases of the major facilitator superfamily YP_004764655.1 COG0477 Permeases of the major facilitator superfamily YP_004764658.1 COG0477 Permeases of the major facilitator superfamily YP_004764659.1 COG0268 Ribosomal protein S20 YP_004764660.1 COG0203 Ribosomal protein L17 YP_004764661.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_004764662.1 COG0100 Ribosomal protein S11 YP_004764663.1 COG0099 Ribosomal protein S13 YP_004764664.1 COG0563 Adenylate kinase and related kinases YP_004764665.1 COG0201 Preprotein translocase subunit SecY YP_004764666.1 COG0200 Ribosomal protein L15 YP_004764667.1 COG1841 Ribosomal protein L30/L7E YP_004764668.1 COG0098 Ribosomal protein S5 YP_004764669.1 COG0256 Ribosomal protein L18 YP_004764670.1 COG0097 Ribosomal protein L6P/L9E YP_004764671.1 COG0096 Ribosomal protein S8 YP_004764672.1 COG0199 Ribosomal protein S14 YP_004764673.1 COG0094 Ribosomal protein L5 YP_004764674.1 COG0198 Ribosomal protein L24 YP_004764675.1 COG0093 Ribosomal protein L14 YP_004764676.1 COG0186 Ribosomal protein S17 YP_004764677.1 COG0255 Ribosomal protein L29 YP_004764678.1 COG0197 Ribosomal protein L16/L10E YP_004764679.1 COG0092 Ribosomal protein S3 YP_004764680.1 COG0091 Ribosomal protein L22 YP_004764681.1 COG0185 Ribosomal protein S19 YP_004764682.1 COG0090 Ribosomal protein L2 YP_004764683.1 COG0089 Ribosomal protein L23 YP_004764684.1 COG0088 Ribosomal protein L4 YP_004764685.1 COG0087 Ribosomal protein L3 YP_004764686.1 COG0051 Ribosomal protein S10 YP_004764687.1 COG0050 GTPases - translation elongation factors YP_004764688.1 COG0566 rRNA methylases YP_004764690.1 COG0114 Fumarase YP_004764691.1 COG4118 Antitoxin of toxin-antitoxin stability system YP_004764694.1 COG0206 Cell division GTPase YP_004764695.1 COG4574 Serine protease inhibitor ecotin YP_004764696.1 COG0694 Thioredoxin-like proteins and domains YP_004764697.1 COG0477 Permeases of the major facilitator superfamily YP_004764698.1 COG0513 Superfamily II DNA and RNA helicases YP_004764699.1 COG1278 Cold shock proteins YP_004764701.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_004764702.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_004764703.1 COG1452 Organic solvent tolerance protein OstA YP_004764704.1 COG1570 Exonuclease VII, large subunit YP_004764707.1 COG0708 Exonuclease III YP_004764708.1 COG4095 Uncharacterized conserved protein YP_004764709.1 COG1160 Predicted GTPases YP_004764713.1 COG0661 Predicted unusual protein kinase YP_004764714.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_004764715.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_004764716.1 COG0469 Pyruvate kinase YP_004764720.1 COG2958 Uncharacterized protein conserved in bacteria YP_004764722.1 COG2958 Uncharacterized protein conserved in bacteria YP_004764723.1 COG2958 Uncharacterized protein conserved in bacteria YP_004764724.1 COG0084 Mg-dependent DNase YP_004764725.1 COG0143 Methionyl-tRNA synthetase YP_004764726.1 COG0125 Thymidylate kinase YP_004764727.1 COG0477 Permeases of the major facilitator superfamily YP_004764728.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_004764729.1 COG0525 Valyl-tRNA synthetase YP_004764730.1 COG3475 LPS biosynthesis protein YP_004764731.1 COG3475 LPS biosynthesis protein YP_004764732.1 COG1322 Uncharacterized protein conserved in bacteria YP_004764734.1 COG3306 Glycosyltransferase involved in LPS biosynthesis YP_004764737.1 COG5528 Predicted integral membrane protein YP_004764738.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_004764739.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_004764740.1 COG0603 Predicted PP-loop superfamily ATPase YP_004764741.1 COG1598 Uncharacterized conserved protein YP_004764743.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004764745.1 COG0477 Permeases of the major facilitator superfamily YP_004764746.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_004764747.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004764749.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_004764750.1 COG1138 Cytochrome c biogenesis factor YP_004764751.1 COG4625 Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain YP_004764752.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_004764753.1 COG1472 Beta-glucosidase-related glycosidases YP_004764754.1 COG0789 Predicted transcriptional regulators YP_004764755.1 COG0776 Bacterial nucleoid DNA-binding protein YP_004764757.1 COG1225 Peroxiredoxin YP_004764758.1 COG1560 Lauroyl/myristoyl acyltransferase YP_004764759.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_004764760.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004764761.1 COG2961 Protein involved in catabolism of external DNA YP_004764762.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_004764763.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_004764764.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_004764765.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_004764766.1 MFS type sugar transporter PFAM00083 YP_004764769.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_004764770.1 COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_004764771.1 COG0328 Ribonuclease HI YP_004764772.1 COG3814 Uncharacterized protein conserved in bacteria YP_004764773.1 COG3494 Uncharacterized protein conserved in bacteria YP_004764774.1 COG0237 Dephospho-CoA kinase YP_004764775.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_004764776.1 COG3346 Uncharacterized conserved protein YP_004764777.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_004764779.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_004764780.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_004764783.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_004764788.1 COG0183 Acetyl-CoA acetyltransferase YP_004764789.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_004764790.1 COG3202 ATP/ADP translocase YP_004764792.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004764795.1 COG1253 Hemolysins and related proteins containing CBS domains YP_004764796.1 COG0319 Predicted metal-dependent hydrolase YP_004764799.1 COG0320 Lipoate synthase YP_004764800.1 COG0112 Glycine/serine hydroxymethyltransferase YP_004764801.1 COG0400 Predicted esterase YP_004764802.1 COG0278 Glutaredoxin-related protein YP_004764803.1 COG0177 Predicted EndoIII-related endonuclease YP_004764806.1 COG5510 Predicted small secreted protein YP_004764809.1 COG0313 Predicted methyltransferases YP_004764810.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_004764812.1 COG1826 Sec-independent protein secretion pathway components YP_004764813.1 COG1267 Phosphatidylglycerophosphatase A and related proteins YP_004764814.1 COG0261 Ribosomal protein L21 YP_004764815.1 COG0211 Ribosomal protein L27 YP_004764816.1 COG0527 Aspartokinases YP_004764817.1 COG1396 Predicted transcriptional regulators YP_004764819.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004764820.1 COG0477 Permeases of the major facilitator superfamily YP_004764821.1 COG3027 Uncharacterized protein conserved in bacteria YP_004764822.1 COG1192 ATPases involved in chromosome partitioning YP_004764823.1 COG1426 Uncharacterized protein conserved in bacteria YP_004764824.1 COG2902 NAD-specific glutamate dehydrogenase YP_004764825.1 COG0486 Predicted GTPase YP_004764827.1 COG0477 Permeases of the major facilitator superfamily YP_004764828.1 COG0477 Permeases of the major facilitator superfamily YP_004764829.1 COG0477 Permeases of the major facilitator superfamily YP_004764830.1 COG0477 Permeases of the major facilitator superfamily YP_004764831.1 COG0468 RecA/RadA recombinase YP_004764832.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004764833.1 COG0236 Acyl carrier protein YP_004764834.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004764835.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004764837.1 COG1373 Predicted ATPase (AAA+ superfamily) YP_004764838.1 COG0194 Guanylate kinase YP_004764839.1 COG1396 Predicted transcriptional regulators YP_004764840.1 COG1792 Cell shape-determining protein YP_004764841.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_004764842.1 COG0795 Predicted permeases YP_004764843.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004764845.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_004764846.1 COG0333 Ribosomal protein L32 YP_004764847.1 COG2913 Small protein A (tmRNA-binding) YP_004764848.1 COG0552 Signal recognition particle GTPase YP_004764849.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_004764855.1 COG0587 DNA polymerase III, alpha subunit YP_004764856.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_004764858.1 COG0477 Permeases of the major facilitator superfamily YP_004764859.1 COG0805 Sec-independent protein secretion pathway component TatC YP_004764860.1 COG0172 Seryl-tRNA synthetase YP_004764861.1 COG3451 Type IV secretory pathway, VirB4 components YP_004764863.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_004764864.1 COG3637 Opacity protein and related surface antigens YP_004764865.1 COG0500 SAM-dependent methyltransferases YP_004764866.1 COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system YP_004764867.1 COG2944 Predicted transcriptional regulator YP_004764868.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_004764869.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_004764870.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_004764871.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_004764872.1 COG4133 ABC-type transport system involved in cytochrome c biogenesis, ATPase component YP_004764873.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_004764874.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_004764875.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_004764876.1 COG3671 Predicted membrane protein YP_004764877.1 COG1048 Aconitase A YP_004764878.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_004764879.1 COG0055 F0F1-type ATP synthase, beta subunit YP_004764880.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_004764881.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_004764882.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_004764883.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_004764886.1 COG2602 Beta-lactamase class D YP_004764887.1 COG2602 Beta-lactamase class D YP_004764888.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_004764889.1 COG0621 2-methylthioadenine synthetase YP_004764895.1 COG3807 Uncharacterized protein conserved in bacteria YP_004764896.1 COG0475 Kef-type K+ transport systems, membrane components YP_004764897.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_004764898.1 COG0271 Stress-induced morphogen (activity unknown) YP_004764903.1 COG0361 Translation initiation factor 1 (IF-1) YP_004764904.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_004764905.1 COG1734 DnaK suppressor protein YP_004764906.1 COG0582 Integrase YP_004764908.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_004764909.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_004764910.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases YP_004764911.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_004764913.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_004764914.1 COG1835 Predicted acyltransferases YP_004764915.1 COG0024 Methionine aminopeptidase YP_004764916.1 COG2003 DNA repair proteins YP_004764917.1 COG2003 DNA repair proteins YP_004764918.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_004764920.1 COG3637 Opacity protein and related surface antigens YP_004764921.1 COG3637 Opacity protein and related surface antigens YP_004764922.1 COG1146 Ferredoxin YP_004764923.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_004764924.1 COG0590 Cytosine/adenosine deaminases YP_004764925.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_004764926.1 COG4520 Surface antigen YP_004764927.1 COG1881 Phospholipid-binding protein YP_004764928.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_004764934.1 COG0178 Excinuclease ATPase subunit YP_004764935.1 COG0629 Single-stranded DNA-binding protein YP_004764938.1 COG3772 Phage-related lysozyme (muraminidase) YP_004764940.1 COG1872 Uncharacterized conserved protein YP_004764941.1 COG0326 Molecular chaperone, HSP90 family YP_004764942.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_004764943.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_004764944.1 COG0536 Predicted GTPase YP_004764945.1 COG0372 Citrate synthase YP_004764947.1 COG1573 Uracil-DNA glycosylase YP_004764948.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004764949.1 COG0621 2-methylthioadenine synthetase YP_004764951.1 COG2890 Methylase of polypeptide chain release factors YP_004764952.1 COG0009 Putative translation factor (SUA5) YP_004764953.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_004764954.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_004764955.1 COG1487 Predicted nucleic acid-binding protein, contains PIN domain YP_004764956.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_004764957.1 COG1636 Uncharacterized protein conserved in bacteria YP_004764958.1 COG0477 Permeases of the major facilitator superfamily YP_004764960.1 COG1474 Cdc6-related protein, AAA superfamily ATPase YP_004764962.1 COG0013 Alanyl-tRNA synthetase YP_004764963.1 COG0101 Pseudouridylate synthase YP_004764964.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004764965.1 COG0358 DNA primase (bacterial type) YP_004764966.1 COG0170 Dolichol kinase YP_004764967.1 COG0782 Transcription elongation factor YP_004764968.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_004764969.1 COG3288 NAD/NADP transhydrogenase alpha subunit YP_004764970.1 COG2834 Outer membrane lipoprotein-sorting protein YP_004764971.1 COG2812 DNA polymerase III, gamma/tau subunits YP_004764972.1 COG0718 Uncharacterized protein conserved in bacteria YP_004764975.1 COG0666 FOG: Ankyrin repeat YP_004764976.1 COG3577 Predicted aspartyl protease YP_004764982.1 COG2161 Antitoxin of toxin-antitoxin stability system YP_004764983.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_004764984.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_004764985.1 COG0671 Membrane-associated phospholipid phosphatase YP_004764986.1 COG3077 DNA-damage-inducible protein J YP_004764987.1 COG3041 Uncharacterized protein conserved in bacteria YP_004764988.1 COG0795 Predicted permeases YP_004764989.1 COG2927 DNA polymerase III, chi subunit YP_004764990.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004764991.1 COG0732 Restriction endonuclease S subunits YP_004764994.1 COG3004 Na+/H+ antiporter YP_004764996.1 COG1434 Uncharacterized conserved protein YP_004764997.1 COG0321 Lipoate-protein ligase B YP_004764998.1 COG3023 Negative regulator of beta-lactamase expression YP_004764999.1 COG0228 Ribosomal protein S16 YP_004765000.1 COG0267 Ribosomal protein L33 YP_004765001.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_004765002.1 COG4391 Uncharacterized protein conserved in bacteria YP_004765003.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004765004.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004765005.1 COG0457 FOG: TPR repeat YP_004765006.1 COG0477 Permeases of the major facilitator superfamily YP_004765007.1 COG0408 Coproporphyrinogen III oxidase YP_004765008.1 COG1981 Predicted membrane protein YP_004765009.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_004765010.1 COG0407 Uroporphyrinogen-III decarboxylase