-- dump date 20140620_032707 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 652103000001 SEQ_END SEQ_END NC_014834.1 5404117 5404117 DR NC_014834.1; contig end 5404117..5404117 Rhodopseudomonas palustris DX-1 YP_004106379.1 CDS Rpdx1_0001 NC_014834.1 167 1576 D TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: bbt:BBta_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 167..1576 Rhodopseudomonas palustris DX-1 10067269 YP_004106380.1 CDS Rpdx1_0002 NC_014834.1 1821 2939 D SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: nha:Nham_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 1821..2939 Rhodopseudomonas palustris DX-1 10062188 YP_004106381.1 CDS Rpdx1_0003 NC_014834.1 3081 4265 D KEGG: bra:BRADO0003 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF 3081..4265 Rhodopseudomonas palustris DX-1 10062189 YP_004106382.1 CDS Rpdx1_0004 NC_014834.1 4482 6923 D SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: nha:Nham_0004 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; DNA gyrase subunit B 4482..6923 Rhodopseudomonas palustris DX-1 10062190 YP_004106383.1 CDS Rpdx1_0005 NC_014834.1 7604 9301 D KEGG: mag:amb3054 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 7604..9301 Rhodopseudomonas palustris DX-1 10062191 YP_004106384.1 CDS Rpdx1_0006 NC_014834.1 9356 10804 R TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-4 domain protein; KEGG: rru:Rru_A2544 signal transduction histidine kinase; SMART: PAS domain containing protein; signal transduction histidine kinase complement(9356..10804) Rhodopseudomonas palustris DX-1 10062192 YP_004106385.1 CDS Rpdx1_0007 NC_014834.1 10801 11085 R PFAM: KaiB domain protein; KEGG: rru:Rru_A2543 KaiB; KaiB domain-containing protein complement(10801..11085) Rhodopseudomonas palustris DX-1 10062193 YP_004106386.1 CDS Rpdx1_0008 NC_014834.1 11095 12786 R PFAM: Circadian clock protein KaiC central region; KEGG: rsk:RSKD131_4430 circadian clock protein KaiC; SMART: AAA ATPase; circadian clock protein KaiC complement(11095..12786) Rhodopseudomonas palustris DX-1 10062194 YP_004106387.1 CDS Rpdx1_0009 NC_014834.1 13021 14100 R PFAM: chemotaxis sensory transducer; KEGG: bja:bll4376 hypothetical protein; methyl-accepting chemotaxis sensory transducer complement(13021..14100) Rhodopseudomonas palustris DX-1 10062195 YP_004106388.1 CDS Rpdx1_0010 NC_014834.1 14363 14872 R KEGG: bja:blr8125 transcriptional regulatory protein; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(14363..14872) Rhodopseudomonas palustris DX-1 10062196 YP_004106389.1 CDS Rpdx1_0011 NC_014834.1 15182 15391 R KEGG: bbt:BBta_2219 hypothetical protein; hypothetical protein complement(15182..15391) Rhodopseudomonas palustris DX-1 10062197 YP_004106390.1 CDS Rpdx1_0012 NC_014834.1 15532 15783 R KEGG: vap:Vapar_3641 glutathione S-transferase domain protein; hypothetical protein complement(15532..15783) Rhodopseudomonas palustris DX-1 10062198 YP_004106391.1 CDS Rpdx1_0013 NC_014834.1 15785 15970 R KEGG: bra:BRADO2445 nitrogen fixation protein FixS; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; cbb3-type cytochrome oxidase maturation protein complement(15785..15970) Rhodopseudomonas palustris DX-1 10062199 YP_004106392.1 CDS Rpdx1_0014 NC_014834.1 15961 18159 R KEGG: bbt:BBta_2797 nitrogen fixation protein FixI; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; copper-translocating P-type ATPase complement(15961..18159) Rhodopseudomonas palustris DX-1 10062200 YP_004106393.1 CDS Rpdx1_0015 NC_014834.1 18194 18694 R PFAM: FixH family protein; KEGG: bra:BRADO2443 nitrogen fixation protein FixH; FixH family protein complement(18194..18694) Rhodopseudomonas palustris DX-1 10062201 YP_004106394.1 CDS Rpdx1_0016 NC_014834.1 18714 20171 R TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: bbt:BBta_2795 nitrogen fixation protein; cytochrome c oxidase accessory protein CcoG complement(18714..20171) Rhodopseudomonas palustris DX-1 10062202 YP_004106395.1 CDS Rpdx1_0017 NC_014834.1 20284 21165 R KEGG: bra:BRADO2441 cytochrome-c oxidase FixP chain; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; cbb3-type cytochrome c oxidase subunit III complement(20284..21165) Rhodopseudomonas palustris DX-1 10062203 YP_004106396.1 CDS Rpdx1_0018 NC_014834.1 21173 21337 R KEGG: bra:BRADO2440 cytochrome oxidase subunit, FixQ; hypothetical protein complement(21173..21337) Rhodopseudomonas palustris DX-1 10062204 YP_004106397.1 CDS Rpdx1_0019 NC_014834.1 21347 22081 R KEGG: bbt:BBta_2793 cytochrome-c oxidase FixO chain; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cbb3-type cytochrome c oxidase subunit II complement(21347..22081) Rhodopseudomonas palustris DX-1 10062205 YP_004106398.1 CDS Rpdx1_0020 NC_014834.1 22094 23740 R TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; KEGG: bja:blr2763 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; cbb3-type cytochrome c oxidase subunit I complement(22094..23740) Rhodopseudomonas palustris DX-1 10062206 YP_004106399.1 CDS Rpdx1_0021 NC_014834.1 24039 24776 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO0329 putative acetoin(diacetyl) reductase (acetoin dehydrogenase) (AR) (meso-2,3-butanediol dehydrogenase); oxidoreductase, short chain dehydrogenase; putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(24039..24776) Rhodopseudomonas palustris DX-1 10062207 YP_004106400.1 CDS Rpdx1_0022 NC_014834.1 24896 25498 R PFAM: DSBA oxidoreductase; KEGG: bja:blr0588 hypothetical protein; DSBA oxidoreductase complement(24896..25498) Rhodopseudomonas palustris DX-1 10062208 YP_004106401.1 CDS Rpdx1_0023 NC_014834.1 25714 26382 D PFAM: Glutathione S-transferase domain; KEGG: bja:bll0585 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein 25714..26382 Rhodopseudomonas palustris DX-1 10062209 YP_004106402.1 CDS Rpdx1_0024 NC_014834.1 26505 27380 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oca:OCAR_4340 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(26505..27380) Rhodopseudomonas palustris DX-1 10062210 YP_004106403.1 CDS Rpdx1_0025 NC_014834.1 27630 29363 R TIGRFAM: gamma-glutamyltransferase; KEGG: nha:Nham_0191 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(27630..29363) Rhodopseudomonas palustris DX-1 10062211 YP_004106404.1 CDS Rpdx1_0026 NC_014834.1 29469 30866 D PFAM: major facilitator superfamily MFS_1; KEGG: nha:Nham_0192 major facilitator transporter; major facilitator superfamily protein 29469..30866 Rhodopseudomonas palustris DX-1 10062212 YP_004106405.1 CDS Rpdx1_0027 NC_014834.1 31081 32169 D TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: mlo:mll4988 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 31081..32169 Rhodopseudomonas palustris DX-1 10062213 YP_004106406.1 CDS Rpdx1_0029 NC_014834.1 32381 33973 R SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: bja:blr0581 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(32381..33973) Rhodopseudomonas palustris DX-1 10062215 YP_004106407.1 CDS Rpdx1_0030 NC_014834.1 34194 35909 R PFAM: Heparinase II/III family protein; KEGG: bja:blr0580 hypothetical protein; heparinase II/III family protein complement(34194..35909) Rhodopseudomonas palustris DX-1 10062216 YP_004106408.1 CDS Rpdx1_0031 NC_014834.1 36247 37599 R PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: bja:blr0579 SUN protein; Fmu (Sun) domain-containing protein complement(36247..37599) Rhodopseudomonas palustris DX-1 10062217 YP_004106409.1 CDS Rpdx1_0032 NC_014834.1 37755 37973 D PFAM: protein of unknown function DUF1674; KEGG: nha:Nham_0198 hypothetical protein; hypothetical protein 37755..37973 Rhodopseudomonas palustris DX-1 10062218 YP_004106410.1 CDS Rpdx1_0033 NC_014834.1 38057 38629 D manually curated; PFAM: nuclease (SNase domain protein); KEGG: nwi:Nwi_0154 nuclease; SMART: nuclease (SNase domain protein); nuclease 38057..38629 Rhodopseudomonas palustris DX-1 10062219 YP_004106411.1 CDS Rpdx1_0034 NC_014834.1 38645 39529 R KEGG: bra:BRADO0145 hypothetical protein; hypothetical protein complement(38645..39529) Rhodopseudomonas palustris DX-1 10062220 YP_004106412.1 CDS Rpdx1_0035 NC_014834.1 39877 41334 D PFAM: amine oxidase; KEGG: bbt:BBta_0209 amine oxidoreductase domain-containing protein; amine oxidase 39877..41334 Rhodopseudomonas palustris DX-1 10062221 YP_004106413.1 CDS Rpdx1_0036 NC_014834.1 41341 43752 R KEGG: bra:BRADO0141 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta complement(41341..43752) Rhodopseudomonas palustris DX-1 10062222 YP_004106414.1 CDS Rpdx1_0037 NC_014834.1 43897 44376 R KEGG: bbt:BBta_0213 hypothetical protein; hypothetical protein complement(43897..44376) Rhodopseudomonas palustris DX-1 10062223 YP_004106415.1 CDS Rpdx1_0038 NC_014834.1 44612 45694 R KEGG: nwi:Nwi_0066 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase subunit alpha complement(44612..45694) Rhodopseudomonas palustris DX-1 10062224 YP_004106416.1 CDS Rpdx1_0039 NC_014834.1 45810 46169 R KEGG: nha:Nham_0075 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; 50S ribosomal protein L20 complement(45810..46169) Rhodopseudomonas palustris DX-1 10062225 YP_004106417.1 CDS Rpdx1_0040 NC_014834.1 46261 46461 R KEGG: bbt:BBta_0216 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 complement(46261..46461) Rhodopseudomonas palustris DX-1 10062226 YP_004106418.1 CDS Rpdx1_0041 NC_014834.1 46792 47331 R manually curated; TIGRFAM: translation initiation factor IF-3; KEGG: bbt:BBta_0218 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; translation initiation factor IF-3 complement(46792..47331) Rhodopseudomonas palustris DX-1 10062227 YP_004106419.1 CDS Rpdx1_0042 NC_014834.1 47654 48439 D KEGG: nha:Nham_0078 hypothetical protein; hypothetical protein 47654..48439 Rhodopseudomonas palustris DX-1 10062228 YP_004106420.1 CDS Rpdx1_0043 NC_014834.1 48432 49634 R PFAM: domain of unknown function DUF1730; KEGG: bja:bll0714 iron-sulfur cluster binding protein; hypothetical protein complement(48432..49634) Rhodopseudomonas palustris DX-1 10062229 YP_004106421.1 CDS Rpdx1_0044 NC_014834.1 49583 50275 R PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_0222 putative glutathione S-transferase family protein; glutathione S-transferase domain-containing protein complement(49583..50275) Rhodopseudomonas palustris DX-1 10062230 YP_004106422.1 CDS Rpdx1_0045 NC_014834.1 50475 51281 D KEGG: bja:blr0716 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 50475..51281 Rhodopseudomonas palustris DX-1 10062231 YP_004106423.1 CDS Rpdx1_0046 NC_014834.1 51337 52302 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bra:BRADO0128 putative NAD dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase complement(51337..52302) Rhodopseudomonas palustris DX-1 10062232 YP_004106424.1 CDS Rpdx1_0047 NC_014834.1 52694 53329 D KEGG: oca:OCAR_4455 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; 3'-5' exonuclease 52694..53329 Rhodopseudomonas palustris DX-1 10062234 YP_004106425.1 CDS Rpdx1_0048 NC_014834.1 53585 54313 D PFAM: protein of unknown function DUF1239; KEGG: bja:blr0720 hypothetical protein; hypothetical protein 53585..54313 Rhodopseudomonas palustris DX-1 10062235 YP_004106426.1 CDS Rpdx1_0049 NC_014834.1 54322 54987 D PFAM: OstA family protein; KEGG: nha:Nham_0177 OstA-like protein; OstA family protein 54322..54987 Rhodopseudomonas palustris DX-1 10062236 YP_004106427.1 CDS Rpdx1_0050 NC_014834.1 55014 55163 D hypothetical protein 55014..55163 Rhodopseudomonas palustris DX-1 10062237 YP_004106428.1 CDS Rpdx1_0051 NC_014834.1 55186 56136 D KEGG: nwi:Nwi_0174 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 55186..56136 Rhodopseudomonas palustris DX-1 10062238 YP_004106429.1 CDS Rpdx1_0052 NC_014834.1 56339 57982 D KEGG: bbt:BBta_0121 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor core-binding region; sigma-54 factor; sigma-54 DNA-binding domain protein; RNA polymerase sigma 54 subunit RpoN 56339..57982 Rhodopseudomonas palustris DX-1 10062239 YP_004106430.1 CDS Rpdx1_0053 NC_014834.1 58039 58647 D KEGG: bbt:BBta_0120 sigma 54 modulation protein / SSU ribosomal protein S30P; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; ribosomal subunit interface protein 58039..58647 Rhodopseudomonas palustris DX-1 10062240 YP_004106431.1 CDS Rpdx1_0054 NC_014834.1 58920 59381 D KEGG: bra:BRADO0111 nitrogen regulatory protein; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; putative PTS IIA-like nitrogen-regulatory protein PtsN 58920..59381 Rhodopseudomonas palustris DX-1 10062241 YP_004106432.1 CDS Rpdx1_0055 NC_014834.1 59652 59918 R PFAM: protein of unknown function DUF1150; KEGG: bbt:BBta_0116 hypothetical protein; hypothetical protein complement(59652..59918) Rhodopseudomonas palustris DX-1 10062242 YP_004106433.1 CDS Rpdx1_0056 NC_014834.1 59968 60393 R PFAM: heat shock protein Hsp20; KEGG: oca:OCAR_4464 heat shock protein HSP20; heat shock protein Hsp20 complement(59968..60393) Rhodopseudomonas palustris DX-1 10062243 YP_004106434.1 CDS Rpdx1_0057 NC_014834.1 60545 61633 R KEGG: bja:bll0730 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein complement(60545..61633) Rhodopseudomonas palustris DX-1 10062244 YP_004106435.1 CDS Rpdx1_0058 NC_014834.1 61639 62487 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll0731 glycerol-3-phosphate ABC transporter membrane spanning protein; binding-protein-dependent transporter inner membrane component complement(61639..62487) Rhodopseudomonas palustris DX-1 10062245 YP_004106436.1 CDS Rpdx1_0059 NC_014834.1 62487 63368 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll0732 glycerol-3-phosphate ABC transporter permease protein; binding-protein-dependent transporter inner membrane component complement(62487..63368) Rhodopseudomonas palustris DX-1 10062246 YP_004106437.1 CDS Rpdx1_0060 NC_014834.1 63534 64862 R PFAM: extracellular solute-binding protein family 1; KEGG: bja:bll0733 ABC transporter glycerol-3-phosphate-binding protein; family 1 extracellular solute-binding protein complement(63534..64862) Rhodopseudomonas palustris DX-1 10062247 YP_004106438.1 CDS Rpdx1_0061 NC_014834.1 65081 66271 R KEGG: bja:bll0734 hypothetical protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; formyl-CoA transferase complement(65081..66271) Rhodopseudomonas palustris DX-1 10062248 YP_004106439.1 CDS Rpdx1_0062 NC_014834.1 66608 67012 R PFAM: conserved hypothetical protein; KEGG: bja:bll0737 hypothetical protein; hypothetical protein complement(66608..67012) Rhodopseudomonas palustris DX-1 10062250 YP_004106440.1 CDS Rpdx1_0063 NC_014834.1 67156 68493 D KEGG: bra:BRADO0098 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 67156..68493 Rhodopseudomonas palustris DX-1 10062251 YP_004106441.1 CDS Rpdx1_0064 NC_014834.1 68497 69171 R PFAM: protein of unknown function DUF374; KEGG: mag:amb4091 hypothetical protein; hypothetical protein complement(68497..69171) Rhodopseudomonas palustris DX-1 10062252 YP_004106442.1 CDS Rpdx1_0065 NC_014834.1 69337 69975 D TIGRFAM: cytidylate kinase; KEGG: bbt:BBta_0104 cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 69337..69975 Rhodopseudomonas palustris DX-1 10062253 YP_004106443.1 CDS Rpdx1_0066 NC_014834.1 70275 71972 D KEGG: nha:Nham_0163 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein; 30S ribosomal protein S1 70275..71972 Rhodopseudomonas palustris DX-1 10062254 YP_004106444.1 CDS Rpdx1_0067 NC_014834.1 72197 73177 D KEGG: bra:BRADO0095 S49 family peptidase; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 72197..73177 Rhodopseudomonas palustris DX-1 10062255 YP_004106445.1 CDS Rpdx1_0068 NC_014834.1 73343 73657 D TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: bra:BRADO0094 integration host factor subunit beta; SMART: histone family protein DNA-binding protein; integration host factor subunit beta 73343..73657 Rhodopseudomonas palustris DX-1 10062256 YP_004106446.1 CDS Rpdx1_0069 NC_014834.1 73695 74081 D KEGG: bja:blr0743 hypothetical protein; hypothetical protein 73695..74081 Rhodopseudomonas palustris DX-1 10062257 YP_004106447.1 CDS Rpdx1_0070 NC_014834.1 74140 74781 D KEGG: nwi:Nwi_0056 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase 74140..74781 Rhodopseudomonas palustris DX-1 10062258 YP_004106448.1 CDS Rpdx1_0071 NC_014834.1 74795 76009 D KEGG: bra:BRADO0091 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; tryptophan synthase subunit beta 74795..76009 Rhodopseudomonas palustris DX-1 10062259 YP_004106449.1 CDS Rpdx1_0072 NC_014834.1 76009 76845 D TIGRFAM: tryptophan synthase, alpha subunit; KEGG: bbt:BBta_0096 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 76009..76845 Rhodopseudomonas palustris DX-1 10062260 YP_004106450.1 CDS Rpdx1_0073 NC_014834.1 76954 77940 D KEGG: nha:Nham_0061 acetyl-CoA carboxylase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase; acetyl-CoA carboxylase, carboxyl transferase subunit beta 76954..77940 Rhodopseudomonas palustris DX-1 10062261 YP_004106451.1 CDS Rpdx1_0074 NC_014834.1 77937 79265 D TIGRFAM: FolC bifunctional protein; KEGG: nha:Nham_0060 FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 77937..79265 Rhodopseudomonas palustris DX-1 10062262 YP_004106452.1 CDS Rpdx1_0075 NC_014834.1 79405 79725 R KEGG: oca:OCAR_4481 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin complement(79405..79725) Rhodopseudomonas palustris DX-1 10062263 YP_004106453.1 CDS Rpdx1_0076 NC_014834.1 79822 83307 R TIGRFAM: double-strand break repair helicase AddA; KEGG: bja:bll0752 putative helicase 2; PFAM: UvrD/REP helicase; double-strand break repair helicase AddA complement(79822..83307) Rhodopseudomonas palustris DX-1 10062264 YP_004106454.1 CDS Rpdx1_0077 NC_014834.1 83304 86453 R TIGRFAM: double-strand break repair protein AddB; KEGG: bbt:BBta_0089 DNA helicase/exodeoxyribonuclease V, subunit B; double-strand break repair protein AddB complement(83304..86453) Rhodopseudomonas palustris DX-1 10062265 YP_004106455.1 CDS Rpdx1_0078 NC_014834.1 86516 87238 R PFAM: Nucleotidyl transferase; KEGG: bja:bll0754 nucleotidyltransferase family protein; nucleotidyl transferase complement(86516..87238) Rhodopseudomonas palustris DX-1 10062266 YP_004106456.1 CDS Rpdx1_0079 NC_014834.1 87387 87698 R KEGG: bbt:BBta_0087 hypothetical protein; hypothetical protein complement(87387..87698) Rhodopseudomonas palustris DX-1 10062267 YP_004106457.1 CDS Rpdx1_0080 NC_014834.1 87802 89322 R PFAM: protein of unknown function UPF0079; aminoglycoside phosphotransferase; KEGG: nha:Nham_0054 hypothetical protein; hypothetical protein complement(87802..89322) Rhodopseudomonas palustris DX-1 10062268 YP_004106458.1 CDS Rpdx1_0081 NC_014834.1 89319 91832 R manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: nwi:Nwi_0045 histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(89319..91832) Rhodopseudomonas palustris DX-1 10062269 YP_004106459.1 CDS Rpdx1_0082 NC_014834.1 92051 92509 R KEGG: bbt:BBta_0084 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut complement(92051..92509) Rhodopseudomonas palustris DX-1 10062270 YP_004106460.1 CDS Rpdx1_0083 NC_014834.1 92506 93951 R TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: bja:bll0759 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase complement(92506..93951) Rhodopseudomonas palustris DX-1 10062271 YP_004106461.1 CDS Rpdx1_0084 NC_014834.1 94005 95582 R KEGG: bbt:BBta_0082 2-octaprenylphenol hydroxylase; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; 2-polyprenylphenol 6-hydroxylase complement(94005..95582) Rhodopseudomonas palustris DX-1 10062272 YP_004106462.1 CDS Rpdx1_0085 NC_014834.1 95579 96340 R KEGG: bja:bll0761 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase complement(95579..96340) Rhodopseudomonas palustris DX-1 10062273 YP_004106463.1 CDS Rpdx1_0086 NC_014834.1 96585 97460 D TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: bbt:BBta_0080 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; formamidopyrimidine-DNA glycosylase 96585..97460 Rhodopseudomonas palustris DX-1 10062274 YP_004106464.1 CDS Rpdx1_0087 NC_014834.1 97521 98861 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bja:bll0764 hypothetical protein; peptidoglycan-binding domain 1 protein complement(97521..98861) Rhodopseudomonas palustris DX-1 10062275 YP_004106465.1 CDS Rpdx1_0088 NC_014834.1 99068 99868 D PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bra:BRADO0069 putative molybdopterin biosynthesis protein MoeB; UBA/THIF-type NAD/FAD-binding protein 99068..99868 Rhodopseudomonas palustris DX-1 10062276 YP_004106466.1 CDS Rpdx1_0089 NC_014834.1 99993 101678 D PFAM: protein of unknown function DUF894 DitE; KEGG: bja:blr0559 MFS permease; hypothetical protein 99993..101678 Rhodopseudomonas palustris DX-1 10062277 YP_004106467.1 CDS Rpdx1_0090 NC_014834.1 101783 102004 R KEGG: bra:BRADO0286 putative signal peptide; hypothetical protein complement(101783..102004) Rhodopseudomonas palustris DX-1 10062278 YP_004106468.1 CDS Rpdx1_0091 NC_014834.1 102082 102423 R PFAM: Phasin; KEGG: bja:blr3464 hypothetical protein; phasin family protein complement(102082..102423) Rhodopseudomonas palustris DX-1 10062279 YP_004106469.1 CDS Rpdx1_0092 NC_014834.1 102664 103068 R KEGG: krh:KRH_09010 hypothetical protein; hypothetical protein complement(102664..103068) Rhodopseudomonas palustris DX-1 10062280 YP_004106470.1 CDS Rpdx1_0093 NC_014834.1 103144 103485 R KEGG: met:M446_4370 triple helix repeat-containing collagen; hypothetical protein complement(103144..103485) Rhodopseudomonas palustris DX-1 10062281 YP_004106471.1 CDS Rpdx1_0094 NC_014834.1 103507 104139 D KEGG: bma:BMAA1451.2 hypothetical protein; hypothetical protein 103507..104139 Rhodopseudomonas palustris DX-1 10062282 YP_004106472.1 CDS Rpdx1_0095 NC_014834.1 104268 104942 D PFAM: regulatory protein TetR; KEGG: bbt:BBta_2740 TetR family transcriptional regulator; regulatory protein TetR 104268..104942 Rhodopseudomonas palustris DX-1 10062283 YP_004106473.1 CDS Rpdx1_0096 NC_014834.1 104939 105853 D KEGG: bja:bll3835 hypothetical protein; hypothetical protein 104939..105853 Rhodopseudomonas palustris DX-1 10062284 YP_004106474.1 CDS Rpdx1_0097 NC_014834.1 105983 107125 D KEGG: nha:Nham_0992 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 105983..107125 Rhodopseudomonas palustris DX-1 10062285 YP_004106475.1 CDS Rpdx1_0098 NC_014834.1 107129 110278 D KEGG: nha:Nham_0993 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 107129..110278 Rhodopseudomonas palustris DX-1 10062286 YP_004106476.1 CDS Rpdx1_0099 NC_014834.1 110415 110825 D PFAM: protein of unknown function DUF1078 domain protein; KEGG: bra:BRADO6624 putative flagellar basal-body rod protein (FlgC); hypothetical protein 110415..110825 Rhodopseudomonas palustris DX-1 10062287 YP_004106477.1 CDS Rpdx1_0100 NC_014834.1 110860 111918 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mrd:Mrad2831_4760 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(110860..111918) Rhodopseudomonas palustris DX-1 10062288 YP_004106478.1 CDS Rpdx1_0101 NC_014834.1 111915 112913 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mrd:Mrad2831_4761 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(111915..112913) Rhodopseudomonas palustris DX-1 10062289 YP_004106479.1 CDS Rpdx1_0102 NC_014834.1 112916 113824 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mrd:Mrad2831_4762 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(112916..113824) Rhodopseudomonas palustris DX-1 10062290 YP_004106480.1 CDS Rpdx1_0103 NC_014834.1 113821 114801 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mrd:Mrad2831_4763 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(113821..114801) Rhodopseudomonas palustris DX-1 10062291 YP_004106481.1 CDS Rpdx1_0104 NC_014834.1 114830 116152 R PFAM: extracellular solute-binding protein family 5; KEGG: mrd:Mrad2831_4764 extracellular solute-binding protein; family 5 extracellular solute-binding protein complement(114830..116152) Rhodopseudomonas palustris DX-1 10062292 YP_004106482.1 CDS Rpdx1_0105 NC_014834.1 116149 116259 R hypothetical protein complement(116149..116259) Rhodopseudomonas palustris DX-1 10062293 YP_004106483.1 CDS Rpdx1_0106 NC_014834.1 116348 117301 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mrd:Mrad2831_4765 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K complement(116348..117301) Rhodopseudomonas palustris DX-1 10062294 YP_004106484.1 CDS Rpdx1_0107 NC_014834.1 117298 118941 R PFAM: Amidohydrolase 3; KEGG: mrd:Mrad2831_4766 amidohydrolase 3; amidohydrolase 3 complement(117298..118941) Rhodopseudomonas palustris DX-1 10062295 YP_004106485.1 CDS Rpdx1_0108 NC_014834.1 119031 120719 D KEGG: mrd:Mrad2831_4755 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 119031..120719 Rhodopseudomonas palustris DX-1 10062296 YP_004106486.1 CDS Rpdx1_0109 NC_014834.1 120838 121626 R PFAM: protein of unknown function DUF81; KEGG: mrd:Mrad2831_4756 hypothetical protein; hypothetical protein complement(120838..121626) Rhodopseudomonas palustris DX-1 10062297 YP_004106487.1 CDS Rpdx1_0110 NC_014834.1 121635 123146 R PFAM: Aldehyde Dehydrogenase; KEGG: mrd:Mrad2831_4757 aldehyde dehydrogenase; aldehyde dehydrogenase complement(121635..123146) Rhodopseudomonas palustris DX-1 10062298 YP_004106488.1 CDS Rpdx1_0111 NC_014834.1 123358 123765 D PFAM: protein of unknown function DUF1486; KEGG: mrd:Mrad2831_4758 hypothetical protein; hypothetical protein 123358..123765 Rhodopseudomonas palustris DX-1 10062299 YP_004106489.1 CDS Rpdx1_0112 NC_014834.1 123762 125156 D PFAM: FAD dependent oxidoreductase; KEGG: bph:Bphy_6224 FAD dependent oxidoreductase; FAD dependent oxidoreductase 123762..125156 Rhodopseudomonas palustris DX-1 10062300 YP_004106490.1 CDS Rpdx1_0113 NC_014834.1 125301 125609 R KEGG: xau:Xaut_4360 hypothetical protein; hypothetical protein complement(125301..125609) Rhodopseudomonas palustris DX-1 10062301 YP_004106491.1 CDS Rpdx1_0114 NC_014834.1 126044 126781 D TIGRFAM: methyltransferase FkbM family; KEGG: smd:Smed_1809 FkbM family methyltransferase; FkbM family methyltransferase 126044..126781 Rhodopseudomonas palustris DX-1 10062302 YP_004106492.1 CDS Rpdx1_0115 NC_014834.1 126796 127686 D KEGG: azc:AZC_3956 hypothetical protein; hypothetical protein 126796..127686 Rhodopseudomonas palustris DX-1 10062303 YP_004106493.1 CDS Rpdx1_0116 NC_014834.1 127777 130056 D KEGG: ava:Ava_1003 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; multi-sensor signal transduction histidine kinase 127777..130056 Rhodopseudomonas palustris DX-1 10062304 YP_004106494.1 CDS Rpdx1_0117 NC_014834.1 130049 131689 D PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: app:CAP2UW1_2571 TrkA-N domain protein; TrkA-N domain-containing protein 130049..131689 Rhodopseudomonas palustris DX-1 10062305 YP_004106495.1 CDS Rpdx1_0118 NC_014834.1 131696 132520 R PFAM: metallophosphoesterase; KEGG: bja:bll4141 hypothetical protein; metallophosphoesterase complement(131696..132520) Rhodopseudomonas palustris DX-1 10062306 YP_004106496.1 CDS Rpdx1_0119 NC_014834.1 132517 133341 R PFAM: metallophosphoesterase; KEGG: mlo:mll3631 3',5'-cyclic-nucleotide phosphodiesterase, CpdA; metallophosphoesterase complement(132517..133341) Rhodopseudomonas palustris DX-1 10062307 YP_004106497.1 CDS Rpdx1_0120 NC_014834.1 133406 134686 R PFAM: extracellular solute-binding protein family 1; KEGG: bmr:BMI_II1186 sugar ABC transporter, periplasmic sugar-binding protein, putative; family 1 extracellular solute-binding protein complement(133406..134686) Rhodopseudomonas palustris DX-1 10062308 YP_004106498.1 CDS Rpdx1_0121 NC_014834.1 134709 135545 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmr:BMI_II1187 sugar ABC transporter, permease protein, putative; binding-protein-dependent transporter inner membrane component complement(134709..135545) Rhodopseudomonas palustris DX-1 10062309 YP_004106499.1 CDS Rpdx1_0122 NC_014834.1 135542 136501 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_1668 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(135542..136501) Rhodopseudomonas palustris DX-1 10062310 YP_004106500.1 CDS Rpdx1_0123 NC_014834.1 136494 137648 R KEGG: sil:SPO1823 sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein complement(136494..137648) Rhodopseudomonas palustris DX-1 10062311 YP_004106501.1 CDS Rpdx1_0124 NC_014834.1 137776 138654 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azl:AZL_a10500 transcriptional regulator; LysR family transcriptional regulator 137776..138654 Rhodopseudomonas palustris DX-1 10062312 YP_004106502.1 CDS Rpdx1_0125 NC_014834.1 138660 139355 R KEGG: tmz:Tmz1t_1807 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(138660..139355) Rhodopseudomonas palustris DX-1 10062313 YP_004106503.1 CDS Rpdx1_0126 NC_014834.1 139352 140125 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_2682 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(139352..140125) Rhodopseudomonas palustris DX-1 10062314 YP_004106504.1 CDS Rpdx1_0127 NC_014834.1 140115 141107 R KEGG: sth:STH760 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein complement(140115..141107) Rhodopseudomonas palustris DX-1 10062315 YP_004106505.1 CDS Rpdx1_0128 NC_014834.1 141120 142979 R KEGG: dvu:DVU1771 [Fe] hydrogenase gamma; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit; hydrogenase, Fe-only complement(141120..142979) Rhodopseudomonas palustris DX-1 10062316 YP_004106506.1 CDS Rpdx1_0129 NC_014834.1 142984 144984 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: dvl:Dvul_1383 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(142984..144984) Rhodopseudomonas palustris DX-1 10062317 YP_004106507.1 CDS Rpdx1_0130 NC_014834.1 145300 148515 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bbt:BBta_0531 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; response regulator receiver; multi-sensor hybrid histidine kinase complement(145300..148515) Rhodopseudomonas palustris DX-1 10062318 YP_004106508.1 CDS Rpdx1_0131 NC_014834.1 148834 149139 R KEGG: bbt:BBta_7548 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; 50S ribosomal protein L28 complement(148834..149139) Rhodopseudomonas palustris DX-1 10062319 YP_004106509.1 CDS Rpdx1_0132 NC_014834.1 149444 150319 D KEGG: nha:Nham_0503 hypothetical protein; hypothetical protein 149444..150319 Rhodopseudomonas palustris DX-1 10062320 YP_004106510.1 CDS Rpdx1_0133 NC_014834.1 150623 153883 D KEGG: nha:Nham_0504 helicase-like; PFAM: helicase domain protein; SMART: helicase domain protein; helicase domain-containing protein 150623..153883 Rhodopseudomonas palustris DX-1 10062321 YP_004106511.1 CDS Rpdx1_0134 NC_014834.1 153913 154182 D KEGG: nha:Nham_0505 RNA-binding S4; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 153913..154182 Rhodopseudomonas palustris DX-1 10062322 YP_004106512.1 CDS Rpdx1_0135 NC_014834.1 154257 154595 D KEGG: bja:bll0157 ferredoxin; ferredoxin 154257..154595 Rhodopseudomonas palustris DX-1 10062323 YP_004106513.1 CDS Rpdx1_0136 NC_014834.1 155110 155904 D PFAM: transcription factor CarD; KEGG: bbt:BBta_7543 CarD family transcriptional regulator; CarD family transcriptional regulator 155110..155904 Rhodopseudomonas palustris DX-1 10062324 YP_004106514.1 CDS Rpdx1_0137 NC_014834.1 155987 157444 R PFAM: peptidase M48 Ste24p; Peptidoglycan-binding lysin domain; KEGG: nha:Nham_0508 peptidase M48, Ste24p; peptidase M48 Ste24p complement(155987..157444) Rhodopseudomonas palustris DX-1 10062325 YP_004106515.1 CDS Rpdx1_0138 NC_014834.1 157515 158306 R PFAM: nuclease (SNase domain protein); KEGG: nha:Nham_0509 nuclease (SNase-like); nuclease complement(157515..158306) Rhodopseudomonas palustris DX-1 10062326 YP_004106516.1 CDS Rpdx1_0139 NC_014834.1 158687 159892 D PFAM: Extracellular ligand-binding receptor; KEGG: bja:bll0144 substrate-binding protein; extracellular ligand-binding receptor 158687..159892 Rhodopseudomonas palustris DX-1 10062327 YP_004106517.1 CDS Rpdx1_0140 NC_014834.1 160075 160863 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_7538 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 160075..160863 Rhodopseudomonas palustris DX-1 10062328 YP_004106518.1 CDS Rpdx1_0141 NC_014834.1 160866 161630 D KEGG: bja:bll0142 hypothetical protein; hypothetical protein 160866..161630 Rhodopseudomonas palustris DX-1 10062329 YP_004106519.1 CDS Rpdx1_0142 NC_014834.1 161802 162608 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr0140 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(161802..162608) Rhodopseudomonas palustris DX-1 10062330 YP_004106520.1 CDS Rpdx1_0143 NC_014834.1 162641 163801 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr0139 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(162641..163801) Rhodopseudomonas palustris DX-1 10062331 YP_004106521.1 CDS Rpdx1_0144 NC_014834.1 163828 164892 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr0138 hypothetical protein; acyl-CoA dehydrogenase domain-containing protein complement(163828..164892) Rhodopseudomonas palustris DX-1 10062332 YP_004106522.1 CDS Rpdx1_0145 NC_014834.1 165153 165935 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll0137 oxidoreductase; short-chain dehydrogenase/reductase SDR 165153..165935 Rhodopseudomonas palustris DX-1 10062333 YP_004106523.1 CDS Rpdx1_0146 NC_014834.1 166001 166297 R KEGG: oca:OCAR_4055 transglycosylase-associated protein; transglycosylase-associated protein complement(166001..166297) Rhodopseudomonas palustris DX-1 10062334 YP_004106524.1 CDS Rpdx1_0147 NC_014834.1 166362 166916 R PFAM: protein of unknown function DUF937; KEGG: nha:Nham_0511 hypothetical protein; hypothetical protein complement(166362..166916) Rhodopseudomonas palustris DX-1 10062335 YP_004106525.1 CDS Rpdx1_0148 NC_014834.1 167050 168381 R PFAM: Protein of unknown function DUF2134, membrane; KEGG: bbt:BBta_7591 hypothetical protein; hypothetical protein complement(167050..168381) Rhodopseudomonas palustris DX-1 10062336 YP_004106526.1 CDS Rpdx1_0149 NC_014834.1 168795 169796 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr0103 oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein complement(168795..169796) Rhodopseudomonas palustris DX-1 10062338 YP_004106527.1 CDS Rpdx1_0150 NC_014834.1 169889 170839 R KEGG: bja:blr0101 hypothetical protein; hypothetical protein complement(169889..170839) Rhodopseudomonas palustris DX-1 10062339 YP_004106528.1 CDS Rpdx1_0151 NC_014834.1 171120 172751 D KEGG: bbt:BBta_7493 glutamate synthase domain-containing protein; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase 171120..172751 Rhodopseudomonas palustris DX-1 10062340 YP_004106529.1 CDS Rpdx1_0152 NC_014834.1 172837 173649 R PFAM: Creatininase; KEGG: nwi:Nwi_0330 creatininase; creatininase complement(172837..173649) Rhodopseudomonas palustris DX-1 10062341 YP_004106530.1 CDS Rpdx1_0153 NC_014834.1 173778 174908 D KEGG: nha:Nham_0425 perplasmic binding protein of ABC transporter; perplasmic-binding protein of ABC transporter 173778..174908 Rhodopseudomonas palustris DX-1 10062342 YP_004106531.1 CDS Rpdx1_0154 NC_014834.1 174917 175747 D KEGG: bbt:BBta_7481 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 174917..175747 Rhodopseudomonas palustris DX-1 10062343 YP_004106532.1 CDS Rpdx1_0155 NC_014834.1 175753 176568 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nha:Nham_0427 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 175753..176568 Rhodopseudomonas palustris DX-1 10062344 YP_004106533.1 CDS Rpdx1_0156 NC_014834.1 176568 177554 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: nha:Nham_0428 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 176568..177554 Rhodopseudomonas palustris DX-1 10062345 YP_004106534.1 CDS Rpdx1_0157 NC_014834.1 177557 178240 D KEGG: nha:Nham_0429 hypothetical protein; hypothetical protein 177557..178240 Rhodopseudomonas palustris DX-1 10062346 YP_004106535.1 CDS Rpdx1_0158 NC_014834.1 178385 179818 D PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: rle:RL1126 hypothetical protein; hypothetical protein 178385..179818 Rhodopseudomonas palustris DX-1 10062347 YP_004106536.1 CDS Rpdx1_0159 NC_014834.1 179874 181367 R KEGG: bra:BRADO0028 succinate-semialdehyde dehydrogenase [NADP+] (SSDH); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinate-semialdehyde dehydrogenase complement(179874..181367) Rhodopseudomonas palustris DX-1 10062348 YP_004106537.1 CDS Rpdx1_0160 NC_014834.1 181524 181850 R KEGG: bja:blr0806 hypothetical protein; hypothetical protein complement(181524..181850) Rhodopseudomonas palustris DX-1 10062349 YP_004106538.1 CDS Rpdx1_0161 NC_014834.1 182095 183282 D PFAM: beta-lactamase; KEGG: bja:bll0805 hypothetical protein; beta-lactamase 182095..183282 Rhodopseudomonas palustris DX-1 10062350 YP_004106539.1 CDS Rpdx1_0162 NC_014834.1 183415 185109 D PFAM: AMP-dependent synthetase and ligase; KEGG: met:M446_2319 AMP-binding domain protein; AMP-dependent synthetase and ligase 183415..185109 Rhodopseudomonas palustris DX-1 10062351 YP_004106540.1 CDS Rpdx1_0163 NC_014834.1 185270 186271 R PFAM: PfkB domain protein; KEGG: nha:Nham_0010 PfkB; PfkB domain-containing protein complement(185270..186271) Rhodopseudomonas palustris DX-1 10062352 YP_004106541.1 CDS Rpdx1_0164 NC_014834.1 186550 188106 D KEGG: bja:bll0803 putative virulence factor; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN 186550..188106 Rhodopseudomonas palustris DX-1 10062353 YP_004106542.1 CDS Rpdx1_0165 NC_014834.1 188162 189214 D TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: nha:Nham_0012 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 188162..189214 Rhodopseudomonas palustris DX-1 10062354 YP_004106543.1 CDS Rpdx1_0166 NC_014834.1 189425 189919 D KEGG: nwi:Nwi_0008 hypothetical protein; hypothetical protein 189425..189919 Rhodopseudomonas palustris DX-1 10062355 YP_004106544.1 CDS Rpdx1_0167 NC_014834.1 190062 190628 D PFAM: Scaffold protein Nfu/NifU ; nitrogen-fixing NifU domain protein; KEGG: bbt:BBta_0040 putative NifU protein; Scaffold protein Nfu/NifU 190062..190628 Rhodopseudomonas palustris DX-1 10062356 YP_004106545.1 CDS Rpdx1_0168 NC_014834.1 190764 191459 D PFAM: peptidase M22 glycoprotease; KEGG: nha:Nham_0018 peptidase M22, glycoprotease; peptidase M22 glycoprotease 190764..191459 Rhodopseudomonas palustris DX-1 10062357 YP_004106546.1 CDS Rpdx1_0169 NC_014834.1 191512 191997 D KEGG: bja:bll0798 putative acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 191512..191997 Rhodopseudomonas palustris DX-1 10062358 YP_004106547.1 CDS Rpdx1_0170 NC_014834.1 192060 192491 D PFAM: ferric-uptake regulator; KEGG: bra:BRADO0039 ferric uptake regulator family protein; Fur family ferric uptake regulator 192060..192491 Rhodopseudomonas palustris DX-1 10062359 YP_004106548.1 CDS Rpdx1_0171 NC_014834.1 192577 193236 D KEGG: bja:bll0796 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 192577..193236 Rhodopseudomonas palustris DX-1 10062360 YP_004106549.1 CDS Rpdx1_0172 NC_014834.1 193354 194745 D TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: bja:bll0795 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB; RNA modification protein, MiaB family 193354..194745 Rhodopseudomonas palustris DX-1 10062361 YP_004106550.1 CDS Rpdx1_0173 NC_014834.1 194752 195810 D KEGG: nha:Nham_0022 PhoH-like protein; PFAM: PhoH family protein; K Homology, type 1, subgroup; SMART: KH domain protein; PhoH family protein 194752..195810 Rhodopseudomonas palustris DX-1 10062362 YP_004106551.1 CDS Rpdx1_0174 NC_014834.1 195878 196381 D PFAM: protein of unknown function UPF0054; KEGG: nha:Nham_0023 hypothetical protein; hypothetical protein 195878..196381 Rhodopseudomonas palustris DX-1 10062363 YP_004106552.1 CDS Rpdx1_0175 NC_014834.1 196383 197522 D KEGG: bja:bll0792 magnesium and cobalt efflux protein; PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; hypothetical protein 196383..197522 Rhodopseudomonas palustris DX-1 10062364 YP_004106553.1 CDS Rpdx1_0176 NC_014834.1 197522 199129 D KEGG: nha:Nham_0025 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 197522..199129 Rhodopseudomonas palustris DX-1 10062365 YP_004106554.1 CDS Rpdx1_0177 NC_014834.1 199330 199749 D KEGG: nha:Nham_0026 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 199330..199749 Rhodopseudomonas palustris DX-1 10062366 YP_004106555.1 CDS Rpdx1_0178 NC_014834.1 199837 200652 D PFAM: putative methyltransferase; KEGG: bra:BRADO0048 tRNA (guanine-N(7)-)-methyltransferase; putative methyltransferase 199837..200652 Rhodopseudomonas palustris DX-1 10062367 YP_004106556.1 CDS Rpdx1_0179 NC_014834.1 200665 201513 R PFAM: Phytanoyl-CoA dioxygenase; KEGG: pla:Plav_0212 phytanoyl-CoA dioxygenase; Phytanoyl-CoA dioxygenase complement(200665..201513) Rhodopseudomonas palustris DX-1 10062368 YP_004106557.1 CDS Rpdx1_0180 NC_014834.1 201598 202683 R PFAM: Protein of unknown function DUF2336; KEGG: oca:OCAR_4513 hypothetical protein; hypothetical protein complement(201598..202683) Rhodopseudomonas palustris DX-1 10062369 YP_004106558.1 CDS Rpdx1_0181 NC_014834.1 203020 203799 D PFAM: protein of unknown function DUF150; KEGG: bbt:BBta_0054 hypothetical protein; hypothetical protein 203020..203799 Rhodopseudomonas palustris DX-1 10062370 YP_004106559.1 CDS Rpdx1_0182 NC_014834.1 203802 205415 D KEGG: bja:bll0785 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; transcription termination factor NusA 203802..205415 Rhodopseudomonas palustris DX-1 10062371 YP_004106560.1 CDS Rpdx1_0183 NC_014834.1 205477 206268 D PFAM: protein of unknown function DUF448; KEGG: nwi:Nwi_0023 hypothetical protein; hypothetical protein 205477..206268 Rhodopseudomonas palustris DX-1 10062372 YP_004106561.1 CDS Rpdx1_0184 NC_014834.1 206261 208927 D KEGG: bja:bll0783 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; elongation factor Tu domain 2 protein; translation initiation factor IF-2 206261..208927 Rhodopseudomonas palustris DX-1 10062373 YP_004106562.1 CDS Rpdx1_0185 NC_014834.1 209143 209556 D KEGG: bja:bll0782 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; ribosome-binding factor A 209143..209556 Rhodopseudomonas palustris DX-1 10062374 YP_004106563.1 CDS Rpdx1_0186 NC_014834.1 209556 210653 D KEGG: nwi:Nwi_0026 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B 209556..210653 Rhodopseudomonas palustris DX-1 10062375 YP_004106564.1 CDS Rpdx1_0187 NC_014834.1 210656 210925 D KEGG: nwi:Nwi_0027 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; 30S ribosomal protein S15 210656..210925 Rhodopseudomonas palustris DX-1 10062376 YP_004106565.1 CDS Rpdx1_0188 NC_014834.1 211269 213437 D SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: nwi:Nwi_0028 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; polyribonucleotide nucleotidyltransferase 211269..213437 Rhodopseudomonas palustris DX-1 10062377 YP_004106566.1 CDS Rpdx1_0189 NC_014834.1 213645 214379 D PFAM: Manganese/iron superoxide dismutase-like; KEGG: oca:OCAR_4502 superoxide dismutase; manganese/iron superoxide dismutase-like protein 213645..214379 Rhodopseudomonas palustris DX-1 10062378 YP_004106567.1 CDS Rpdx1_0190 NC_014834.1 214879 216564 D TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; chemotaxis sensory transducer; KEGG: bbt:BBta_2308 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 214879..216564 Rhodopseudomonas palustris DX-1 10062379 YP_004106568.1 CDS Rpdx1_0191 NC_014834.1 216574 217512 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nwi:Nwi_0029 regulatory protein, LysR; LysR family transcriptional regulator complement(216574..217512) Rhodopseudomonas palustris DX-1 10062380 YP_004106569.1 CDS Rpdx1_0192 NC_014834.1 217780 219990 D KEGG: mes:Meso_0626 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI 217780..219990 Rhodopseudomonas palustris DX-1 10062381 YP_004106570.1 CDS Rpdx1_0194 NC_014834.1 220592 221467 R KEGG: azo:azo3831 hypothetical protein; hypothetical protein complement(220592..221467) Rhodopseudomonas palustris DX-1 10062383 YP_004106571.1 CDS Rpdx1_0195 NC_014834.1 221771 222646 D KEGG: nha:Nham_0446 beta-lactamase; PFAM: beta-lactamase; beta-lactamase 221771..222646 Rhodopseudomonas palustris DX-1 10062384 YP_004106572.1 CDS Rpdx1_0196 NC_014834.1 222768 223130 D KEGG: nha:Nham_1339 hypothetical protein; hypothetical protein 222768..223130 Rhodopseudomonas palustris DX-1 10062385 YP_004106573.1 CDS Rpdx1_0197 NC_014834.1 223229 224128 R KEGG: bja:blr7337 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma 32 subunit RpoH complement(223229..224128) Rhodopseudomonas palustris DX-1 10062386 YP_004106574.1 CDS Rpdx1_0198 NC_014834.1 224349 225353 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bja:blr7336 pseudouridine synthase-like protein; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase complement(224349..225353) Rhodopseudomonas palustris DX-1 10062387 YP_004106575.1 CDS Rpdx1_0199 NC_014834.1 225392 225727 D KEGG: bja:bll7335 hypothetical protein; hypothetical protein 225392..225727 Rhodopseudomonas palustris DX-1 10062388 YP_004106576.1 CDS Rpdx1_0200 NC_014834.1 226108 227979 D KEGG: mea:Mex_1p0058 hypothetical protein; hypothetical protein 226108..227979 Rhodopseudomonas palustris DX-1 10062390 YP_004106577.1 CDS Rpdx1_0201 NC_014834.1 228243 228602 D KEGG: bmb:BruAb1_0263 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 228243..228602 Rhodopseudomonas palustris DX-1 10062391 YP_004106578.1 CDS Rpdx1_0202 NC_014834.1 228599 229135 D PFAM: protein of unknown function DUF955; KEGG: bov:BOV_0254 zinc-dependent metallopeptidase; hypothetical protein 228599..229135 Rhodopseudomonas palustris DX-1 10062392 YP_004106579.1 CDS Rpdx1_0203 NC_014834.1 229300 229428 D KEGG: rpf:Rpic12D_4679 hypothetical protein; hypothetical protein 229300..229428 Rhodopseudomonas palustris DX-1 10062393 YP_004106580.1 CDS Rpdx1_0204 NC_014834.1 229604 230146 R PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: met:M446_7059 hypothetical protein; resolvase domain-containing protein complement(229604..230146) Rhodopseudomonas palustris DX-1 10062394 YP_004106581.1 CDS Rpdx1_0205 NC_014834.1 231121 231399 R KEGG: sbi:SORBI_01g043300 hypothetical protein; hypothetical protein complement(231121..231399) Rhodopseudomonas palustris DX-1 10062395 YP_004106582.1 CDS Rpdx1_0206 NC_014834.1 231592 231738 D KEGG: scb:SCAB_19301 hypothetical protein; hypothetical protein 231592..231738 Rhodopseudomonas palustris DX-1 10062396 YP_004106583.1 CDS Rpdx1_0207 NC_014834.1 232530 235052 R SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; manually curated; TIGRFAM: diguanylate cyclase; PAS sensor protein; KEGG: tgr:Tgr7_2681 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase complement(232530..235052) Rhodopseudomonas palustris DX-1 10062397 YP_004106584.1 CDS Rpdx1_0208 NC_014834.1 235276 236460 R KEGG: mgm:Mmc1_0771 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; methionine gamma-lyase complement(235276..236460) Rhodopseudomonas palustris DX-1 10062398 YP_004106585.1 CDS Rpdx1_0209 NC_014834.1 236569 237054 D KEGG: oan:Oant_0505 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 236569..237054 Rhodopseudomonas palustris DX-1 10062399 YP_004106586.1 CDS Rpdx1_0210 NC_014834.1 237055 237492 R KEGG: mlo:mll6589 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin complement(237055..237492) Rhodopseudomonas palustris DX-1 10062400 YP_004106587.1 CDS Rpdx1_0211 NC_014834.1 237575 238558 R KEGG: bja:blr6070 putative alcohol dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; zinc-binding alcohol dehydrogenase family protein complement(237575..238558) Rhodopseudomonas palustris DX-1 10062401 YP_004106588.1 CDS Rpdx1_0212 NC_014834.1 238635 238856 R PFAM: ChaB family protein; KEGG: tcx:Tcr_2071 ChaB; ChaB family protein complement(238635..238856) Rhodopseudomonas palustris DX-1 10062402 YP_004106589.1 CDS Rpdx1_0213 NC_014834.1 239038 239763 D TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: bja:bll4651 hypothetical protein; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 239038..239763 Rhodopseudomonas palustris DX-1 10062403 YP_004106590.1 CDS Rpdx1_0214 NC_014834.1 239914 240738 D PFAM: UspA domain protein; KEGG: nha:Nham_1926 hypothetical protein; UspA domain-containing protein 239914..240738 Rhodopseudomonas palustris DX-1 10062404 YP_004106591.1 CDS Rpdx1_0215 NC_014834.1 241020 242300 R PFAM: glycoside hydrolase family 4; KEGG: bra:BRADO2867 putative alpha-galactosidase (melibiase); glycoside hydrolase family protein complement(241020..242300) Rhodopseudomonas palustris DX-1 10062405 YP_004106592.1 CDS Rpdx1_0216 NC_014834.1 242542 243480 D TIGRFAM: 1-phosphofructokinase; KEGG: bbt:BBta_6479 6-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 242542..243480 Rhodopseudomonas palustris DX-1 10062406 YP_004106593.1 CDS Rpdx1_0217 NC_014834.1 243587 245899 D KEGG: bbt:BBta_3664 putative oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; oxidoreductase alpha (molybdopterin) subunit 243587..245899 Rhodopseudomonas palustris DX-1 10062407 YP_004106594.1 CDS Rpdx1_0218 NC_014834.1 246168 247430 D KEGG: bra:BRADO6613 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase 246168..247430 Rhodopseudomonas palustris DX-1 10062408 YP_004106595.1 CDS Rpdx1_0219 NC_014834.1 247427 248878 D KEGG: msl:Msil_0213 glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; glycogen/starch synthase 247427..248878 Rhodopseudomonas palustris DX-1 10062409 YP_004106596.1 CDS Rpdx1_0220 NC_014834.1 248995 249786 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pzu:PHZ_c3300 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 248995..249786 Rhodopseudomonas palustris DX-1 10062410 YP_004106597.1 CDS Rpdx1_0221 NC_014834.1 249969 250682 R KEGG: nwi:Nwi_0335 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; DNA repair protein RadC complement(249969..250682) Rhodopseudomonas palustris DX-1 10062411 YP_004106598.1 CDS Rpdx1_0222 NC_014834.1 250794 251036 R KEGG: bja:bll5764 hypothetical protein; hypothetical protein complement(250794..251036) Rhodopseudomonas palustris DX-1 10062412 YP_004106599.1 CDS Rpdx1_0223 NC_014834.1 251143 252135 D TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: nha:Nham_0450 hypothetical protein; SMART: Ku domain protein; Ku protein 251143..252135 Rhodopseudomonas palustris DX-1 10062413 YP_004106600.1 CDS Rpdx1_0224 NC_014834.1 252357 253181 R KEGG: nha:Nham_0431 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase complement(252357..253181) Rhodopseudomonas palustris DX-1 10062414 YP_004106601.1 CDS Rpdx1_0225 NC_014834.1 253386 255182 D PFAM: sodium/hydrogen exchanger; transporter-associated region; KEGG: nwi:Nwi_0337 potassium/proton antiporter; sodium/hydrogen exchanger 253386..255182 Rhodopseudomonas palustris DX-1 10062415 YP_004106602.1 CDS Rpdx1_0226 NC_014834.1 255204 256166 R PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: nwi:Nwi_0341 penicillin-insensitive murein endopeptidase; peptidase U6 penicillin-insensitive murein endopeptidase complement(255204..256166) Rhodopseudomonas palustris DX-1 10062416 YP_004106603.1 CDS Rpdx1_0227 NC_014834.1 256532 258769 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bja:bll8156 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase 256532..258769 Rhodopseudomonas palustris DX-1 10062417 YP_004106604.1 CDS Rpdx1_0228 NC_014834.1 258794 260551 R KEGG: rru:Rru_A1289 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; alkaline phosphatase complement(258794..260551) Rhodopseudomonas palustris DX-1 10062418 YP_004106605.1 CDS Rpdx1_0229 NC_014834.1 260661 261620 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: met:M446_5547 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein complement(260661..261620) Rhodopseudomonas palustris DX-1 10062419 YP_004106606.1 CDS Rpdx1_0230 NC_014834.1 261985 262728 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cak:Caul_4355 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 261985..262728 Rhodopseudomonas palustris DX-1 10062420 YP_004106607.1 CDS Rpdx1_0231 NC_014834.1 262796 264133 R TIGRFAM: argininosuccinate synthase; KEGG: oca:OCAR_4294 argininosuccinate synthase; PFAM: argininosuccinate synthase; argininosuccinate synthase complement(262796..264133) Rhodopseudomonas palustris DX-1 10062421 YP_004106608.1 CDS Rpdx1_0232 NC_014834.1 264230 265009 R PFAM: phosphoesterase PA-phosphatase related; KEGG: nwi:Nwi_2804 phosphoesterase, PA-phosphatase related; phosphoesterase PA-phosphatase-like protein complement(264230..265009) Rhodopseudomonas palustris DX-1 10062422 YP_004106609.1 CDS Rpdx1_0233 NC_014834.1 265006 265506 R KEGG: bra:BRADO0245 hypothetical protein; hypothetical protein complement(265006..265506) Rhodopseudomonas palustris DX-1 10062423 YP_004106610.1 CDS Rpdx1_0234 NC_014834.1 265506 266099 R KEGG: bac:BamMC406_4894 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(265506..266099) Rhodopseudomonas palustris DX-1 10062424 YP_004106611.1 CDS Rpdx1_0235 NC_014834.1 266103 267302 R TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bbt:BBta_0241 putative pyruvate formate lyase activating enzyme 2 (YfgB); SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(266103..267302) Rhodopseudomonas palustris DX-1 10062425 YP_004106612.1 CDS Rpdx1_0236 NC_014834.1 267485 268039 R KEGG: nha:Nham_3627 hypothetical protein; hypothetical protein complement(267485..268039) Rhodopseudomonas palustris DX-1 10062426 YP_004106613.1 CDS Rpdx1_0237 NC_014834.1 268213 269049 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll0527 oxidoreductase; short-chain dehydrogenase/reductase SDR complement(268213..269049) Rhodopseudomonas palustris DX-1 10062427 YP_004106614.1 CDS Rpdx1_0238 NC_014834.1 269281 270255 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_0243 putative quinone oxidoreductase (NADPH) and Zn-dependent alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 269281..270255 Rhodopseudomonas palustris DX-1 10062428 YP_004106615.1 CDS Rpdx1_0239 NC_014834.1 270371 272509 R KEGG: bbt:BBta_7528 putative phytoene dehydrogenase and related proteins; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; all-trans-retinol 13,14-reductase complement(270371..272509) Rhodopseudomonas palustris DX-1 10062429 YP_004106616.1 CDS Rpdx1_0240 NC_014834.1 272653 273273 D PFAM: regulatory protein TetR; KEGG: ank:AnaeK_2962 transcriptional regulator, TetR family; regulatory protein TetR 272653..273273 Rhodopseudomonas palustris DX-1 10062430 YP_004106617.1 CDS Rpdx1_0241 NC_014834.1 273289 273663 R PFAM: protein of unknown function DUF1232; KEGG: bja:bll0531 hypothetical protein; hypothetical protein complement(273289..273663) Rhodopseudomonas palustris DX-1 10062431 YP_004106618.1 CDS Rpdx1_0242 NC_014834.1 273743 274048 R PFAM: transcriptional coactivator/pterin dehydratase; KEGG: nwi:Nwi_2809 pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase complement(273743..274048) Rhodopseudomonas palustris DX-1 10062432 YP_004106619.1 CDS Rpdx1_0243 NC_014834.1 274234 275679 D TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:blr0533 hypothetical protein; TAXI family TRAP transporter solute receptor 274234..275679 Rhodopseudomonas palustris DX-1 10062433 YP_004106620.1 CDS Rpdx1_0244 NC_014834.1 275689 277134 R KEGG: mpo:Mpop_0228 PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein complement(275689..277134) Rhodopseudomonas palustris DX-1 10062434 YP_004106621.1 CDS Rpdx1_0245 NC_014834.1 277139 279418 R KEGG: azl:AZL_004810 iron complex outermembrane recepter protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor complement(277139..279418) Rhodopseudomonas palustris DX-1 10062435 YP_004106622.1 CDS Rpdx1_0246 NC_014834.1 280153 281976 D KEGG: bra:BRADO0265 GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A); TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; GTP-binding protein TypA 280153..281976 Rhodopseudomonas palustris DX-1 10062436 YP_004106623.1 CDS Rpdx1_0247 NC_014834.1 282083 283351 D PFAM: amine oxidase; KEGG: bja:blr0541 hypothetical protein; amine oxidase 282083..283351 Rhodopseudomonas palustris DX-1 10062437 YP_004106624.1 CDS Rpdx1_0248 NC_014834.1 283525 284034 D PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr0547 hypothetical protein; N-acetyltransferase GCN5 283525..284034 Rhodopseudomonas palustris DX-1 10062438 YP_004106625.1 CDS Rpdx1_0249 NC_014834.1 284113 284649 D KEGG: bja:blr0548 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; inorganic diphosphatase 284113..284649 Rhodopseudomonas palustris DX-1 10062439 YP_004106626.1 CDS Rpdx1_0250 NC_014834.1 284685 286166 D PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bra:BRADO0276 hypothetical protein; peptidase M20 284685..286166 Rhodopseudomonas palustris DX-1 10062440 YP_004106627.1 CDS Rpdx1_0251 NC_014834.1 286341 287228 R KEGG: nha:Nham_0609 methylenetetrahydrofolate dehydrogenase (NADP+); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase complement(286341..287228) Rhodopseudomonas palustris DX-1 10062441 YP_004106628.1 CDS Rpdx1_0252 NC_014834.1 287335 287661 R PFAM: protein of unknown function DUF167; KEGG: nwi:Nwi_0479 hypothetical protein; hypothetical protein complement(287335..287661) Rhodopseudomonas palustris DX-1 10062442 YP_004106629.1 CDS Rpdx1_0253 NC_014834.1 287671 288030 R KEGG: nwi:Nwi_0478 hypothetical protein; manually curated; PFAM: protein of unknown function YGGT; hypothetical protein complement(287671..288030) Rhodopseudomonas palustris DX-1 10062443 YP_004106630.1 CDS Rpdx1_0254 NC_014834.1 288548 289366 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:bll0552 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(288548..289366) Rhodopseudomonas palustris DX-1 10062445 YP_004106631.1 CDS Rpdx1_0255 NC_014834.1 289441 289941 R KEGG: vei:Veis_3840 hypothetical protein; hypothetical protein complement(289441..289941) Rhodopseudomonas palustris DX-1 10062446 YP_004106632.1 CDS Rpdx1_0256 NC_014834.1 290093 290902 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nha:Nham_0606 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(290093..290902) Rhodopseudomonas palustris DX-1 10062447 YP_004106633.1 CDS Rpdx1_0257 NC_014834.1 291042 291536 R KEGG: nha:Nham_0605 hypothetical protein; hypothetical protein complement(291042..291536) Rhodopseudomonas palustris DX-1 10062448 YP_004106634.1 CDS Rpdx1_0258 NC_014834.1 291673 293058 R PFAM: cytochrome P450; KEGG: bbt:BBta_0276 putative cytochrome P450 hydroxylase superfamily protein; cytochrome P450 complement(291673..293058) Rhodopseudomonas palustris DX-1 10062449 YP_004106635.1 CDS Rpdx1_0259 NC_014834.1 293178 294179 R KEGG: bja:bll0766 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; glyoxylate reductase complement(293178..294179) Rhodopseudomonas palustris DX-1 10062450 YP_004106636.1 CDS Rpdx1_0260 NC_014834.1 294414 294938 D PFAM: protein of unknown function DUF1058; KEGG: bja:blr0767 hypothetical protein; hypothetical protein 294414..294938 Rhodopseudomonas palustris DX-1 10062451 YP_004106637.1 CDS Rpdx1_0261 NC_014834.1 295046 295537 R KEGG: oca:OCAR_4496 ferric uptake regulator, FUR family; manually curated; PFAM: ferric-uptake regulator; Fur family ferric uptake regulator complement(295046..295537) Rhodopseudomonas palustris DX-1 10062452 YP_004106638.1 CDS Rpdx1_0262 NC_014834.1 295796 296323 D TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: nwi:Nwi_0034 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 295796..296323 Rhodopseudomonas palustris DX-1 10062453 YP_004106639.1 CDS Rpdx1_0263 NC_014834.1 296390 297616 D PFAM: Beta-ketoacyl synthase; KEGG: oca:OCAR_4498 3-oxoacyl-(acyl carrier protein) synthase I; beta-ketoacyl synthase 296390..297616 Rhodopseudomonas palustris DX-1 10062454 YP_004106640.1 CDS Rpdx1_0264 NC_014834.1 297791 298603 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr0771 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 297791..298603 Rhodopseudomonas palustris DX-1 10062455 YP_004106641.1 CDS Rpdx1_0266 NC_014834.1 298954 300567 R KEGG: bbt:BBta_7365 phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase complement(298954..300567) Rhodopseudomonas palustris DX-1 10062457 YP_004106642.1 CDS Rpdx1_0267 NC_014834.1 300759 301493 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bja:bll8143 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(300759..301493) Rhodopseudomonas palustris DX-1 10062458 YP_004106643.1 CDS Rpdx1_0268 NC_014834.1 301727 302428 D KEGG: bja:blr8144 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 301727..302428 Rhodopseudomonas palustris DX-1 10062459 YP_004106644.1 CDS Rpdx1_0269 NC_014834.1 302564 304336 D KEGG: nha:Nham_0442 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 302564..304336 Rhodopseudomonas palustris DX-1 10062460 YP_004106645.1 CDS Rpdx1_0270 NC_014834.1 304333 304800 D KEGG: bbt:BBta_7369 HPr kinase; HPr kinase 304333..304800 Rhodopseudomonas palustris DX-1 10062461 YP_004106646.1 CDS Rpdx1_0271 NC_014834.1 304988 305389 D PFAM: PTS system fructose subfamily IIA component; KEGG: nha:Nham_0440 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 304988..305389 Rhodopseudomonas palustris DX-1 10062462 YP_004106647.1 CDS Rpdx1_0272 NC_014834.1 305386 305718 D KEGG: nha:Nham_0439 HPrNtr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr 305386..305718 Rhodopseudomonas palustris DX-1 10062463 YP_004106648.1 CDS Rpdx1_0273 NC_014834.1 305726 307264 R KEGG: bra:BRADO0839 hypothetical protein; hypothetical protein complement(305726..307264) Rhodopseudomonas palustris DX-1 10062464 YP_004106649.1 CDS Rpdx1_0274 NC_014834.1 307409 309220 D KEGG: bbt:BBta_7374 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; GTP-binding protein LepA 307409..309220 Rhodopseudomonas palustris DX-1 10062465 YP_004106650.1 CDS Rpdx1_0275 NC_014834.1 309227 310048 R KEGG: ade:Adeh_3444 hypothetical protein; hypothetical protein complement(309227..310048) Rhodopseudomonas palustris DX-1 10062466 YP_004106651.1 CDS Rpdx1_0276 NC_014834.1 310053 310469 R KEGG: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease Vsr complement(310053..310469) Rhodopseudomonas palustris DX-1 10062467 YP_004106652.1 CDS Rpdx1_0277 NC_014834.1 310466 311638 R KEGG: ade:Adeh_3442 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(310466..311638) Rhodopseudomonas palustris DX-1 10062468 YP_004106653.1 CDS Rpdx1_0278 NC_014834.1 311859 312707 D PFAM: alpha/beta hydrolase fold; KEGG: mac:MA2691 lipolytic enzyme; alpha/beta hydrolase fold protein 311859..312707 Rhodopseudomonas palustris DX-1 10062469 YP_004106654.1 CDS Rpdx1_0279 NC_014834.1 313060 314892 D KEGG: bpt:Bpet0058 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase; (isocitrate dehydrogenase (NADP(+))) kinase 313060..314892 Rhodopseudomonas palustris DX-1 10062470 YP_004106655.1 CDS Rpdx1_0280 NC_014834.1 314982 315725 D KEGG: nwi:Nwi_0060 CysZ-like protein; CysZ-like protein 314982..315725 Rhodopseudomonas palustris DX-1 10062471 YP_004106656.1 CDS Rpdx1_0281 NC_014834.1 315749 315859 R hypothetical protein complement(315749..315859) Rhodopseudomonas palustris DX-1 10062472 YP_004106657.1 CDS Rpdx1_0282 NC_014834.1 316350 317321 D KEGG: rce:RC1_2083 magnesium-chelatase 30 kDa subunit; TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; magnesium chelatase accessory protein 316350..317321 Rhodopseudomonas palustris DX-1 10062473 YP_004106658.1 CDS Rpdx1_0283 NC_014834.1 317449 319014 D PFAM: peptidase S10 serine carboxypeptidase; KEGG: bja:bll5514 hypothetical protein; peptidase S10 serine carboxypeptidase 317449..319014 Rhodopseudomonas palustris DX-1 10062474 YP_004106659.1 CDS Rpdx1_0284 NC_014834.1 319141 319923 R SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: bbt:BBta_0201 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III complement(319141..319923) Rhodopseudomonas palustris DX-1 10062475 YP_004106660.1 CDS Rpdx1_0285 NC_014834.1 319946 320461 D KEGG: nwi:Nwi_0204 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2244, transmembrane; hypothetical protein 319946..320461 Rhodopseudomonas palustris DX-1 10062476 YP_004106661.1 CDS Rpdx1_0286 NC_014834.1 320477 321409 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll0687 transcriptional regulatory protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 320477..321409 Rhodopseudomonas palustris DX-1 10062477 YP_004106662.1 CDS Rpdx1_0287 NC_014834.1 321496 323010 D TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: mrd:Mrad2831_4623 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; phosphoglycerate mutase 321496..323010 Rhodopseudomonas palustris DX-1 10062478 YP_004106663.1 CDS Rpdx1_0288 NC_014834.1 323088 323903 R TIGRFAM: dihydrodipicolinate reductase; KEGG: nha:Nham_0158 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(323088..323903) Rhodopseudomonas palustris DX-1 10062479 YP_004106664.1 CDS Rpdx1_0289 NC_014834.1 324000 324308 R PFAM: protein of unknown function DUF1330; KEGG: bra:BRADO0159 hypothetical protein; hypothetical protein complement(324000..324308) Rhodopseudomonas palustris DX-1 10062480 YP_004106665.1 CDS Rpdx1_0290 NC_014834.1 324334 325047 R TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: bja:blr0683 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase complement(324334..325047) Rhodopseudomonas palustris DX-1 10062481 YP_004106666.1 CDS Rpdx1_0291 NC_014834.1 325044 325637 R PFAM: NADPH-dependent FMN reductase; KEGG: bja:blr0682 putative oxidoreductase; NADPH-dependent FMN reductase complement(325044..325637) Rhodopseudomonas palustris DX-1 10062482 YP_004106667.1 CDS Rpdx1_0292 NC_014834.1 325747 326352 R KEGG: bbt:BBta_0193 phospholipid N-methyltransferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; ribosomal RNA adenine methylase transferase complement(325747..326352) Rhodopseudomonas palustris DX-1 10062483 YP_004106668.1 CDS Rpdx1_0293 NC_014834.1 326446 327585 R TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: nha:Nham_0156 chaperone DnaJ; SMART: heat shock protein DnaJ domain protein; chaperone protein DnaJ complement(326446..327585) Rhodopseudomonas palustris DX-1 10062484 YP_004106669.1 CDS Rpdx1_0294 NC_014834.1 327800 329695 R KEGG: bbt:BBta_0191 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK complement(327800..329695) Rhodopseudomonas palustris DX-1 10062485 YP_004106670.1 CDS Rpdx1_0295 NC_014834.1 330028 330969 D KEGG: bja:bll0679 hypothetical protein; hypothetical protein 330028..330969 Rhodopseudomonas palustris DX-1 10062486 YP_004106671.1 CDS Rpdx1_0296 NC_014834.1 331076 331699 R PFAM: GrpE protein; KEGG: bbt:BBta_0188 protein GrpE (HSP-70 cofactor); GrpE protein HSP-70 cofactor complement(331076..331699) Rhodopseudomonas palustris DX-1 10062487 YP_004106672.1 CDS Rpdx1_0297 NC_014834.1 331790 332878 R KEGG: nha:Nham_0152 heat-inducible transcription repressor; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like; heat-inducible transcription repressor HrcA complement(331790..332878) Rhodopseudomonas palustris DX-1 10062488 YP_004106673.1 CDS Rpdx1_0298 NC_014834.1 333033 333746 D TIGRFAM: ribonuclease PH; KEGG: nha:Nham_0151 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 333033..333746 Rhodopseudomonas palustris DX-1 10062489 YP_004106674.1 CDS Rpdx1_0299 NC_014834.1 333798 334430 D KEGG: bbt:BBta_0185 putative deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 333798..334430 Rhodopseudomonas palustris DX-1 10062490 YP_004106675.1 CDS Rpdx1_0300 NC_014834.1 334420 335577 D TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: bra:BRADO0175 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 334420..335577 Rhodopseudomonas palustris DX-1 10062491 YP_004106676.1 CDS Rpdx1_0301 NC_014834.1 335646 336845 R PFAM: Extracellular ligand-binding receptor; KEGG: nha:Nham_0148 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(335646..336845) Rhodopseudomonas palustris DX-1 10062492 YP_004106677.1 CDS Rpdx1_0302 NC_014834.1 337067 338017 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bja:bll0670 hypothetical protein; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 337067..338017 Rhodopseudomonas palustris DX-1 10062493 YP_004106678.1 CDS Rpdx1_0303 NC_014834.1 338010 338402 D PFAM: protein of unknown function UPF0102; KEGG: bra:BRADO0179 hypothetical protein; hypothetical protein 338010..338402 Rhodopseudomonas palustris DX-1 10062494 YP_004106679.1 CDS Rpdx1_0304 NC_014834.1 338472 339413 D TIGRFAM: glutathione synthetase; KEGG: nha:Nham_0145 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein; glutathione synthetase 338472..339413 Rhodopseudomonas palustris DX-1 10062495 YP_004106680.1 CDS Rpdx1_0305 NC_014834.1 339651 340382 D KEGG: bbt:BBta_7112 LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 339651..340382 Rhodopseudomonas palustris DX-1 10062496 YP_004106681.1 CDS Rpdx1_0306 NC_014834.1 340468 341124 D PFAM: autoinducer synthesis protein; KEGG: bra:BRADO0941 putative autoinducer (acylhomoserine lactone) synthase; autoinducer synthesis protein 340468..341124 Rhodopseudomonas palustris DX-1 10062497 YP_004106682.1 CDS Rpdx1_0307 NC_014834.1 341121 341354 D KEGG: smt:Smal_0037 TonB-dependent receptor; hypothetical protein 341121..341354 Rhodopseudomonas palustris DX-1 10062498 YP_004106683.1 CDS Rpdx1_0308 NC_014834.1 341451 342989 D TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: bja:bll0661 hypothetical protein; SMART: AAA ATPase; Mg chelatase subunit ChlI 341451..342989 Rhodopseudomonas palustris DX-1 10062499 YP_004106684.1 CDS Rpdx1_0309 NC_014834.1 343125 345047 D KEGG: nha:Nham_0129 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; integral membrane sensor hybrid histidine kinase 343125..345047 Rhodopseudomonas palustris DX-1 10062500 YP_004106685.1 CDS Rpdx1_0310 NC_014834.1 345207 346160 D KEGG: oca:OCAR_4402 hypothetical protein; hypothetical protein 345207..346160 Rhodopseudomonas palustris DX-1 10062501 YP_004106686.1 CDS Rpdx1_0311 NC_014834.1 346293 347249 R TIGRFAM: pantothenate kinase; KEGG: nha:Nham_0128 pantothenate kinase; pantothenate kinase complement(346293..347249) Rhodopseudomonas palustris DX-1 10062502 YP_004106687.1 CDS Rpdx1_0312 NC_014834.1 347329 347652 R KEGG: bja:blr0655 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-ATP diphosphatase complement(347329..347652) Rhodopseudomonas palustris DX-1 10062503 YP_004106688.1 CDS Rpdx1_0313 NC_014834.1 347706 348473 R KEGG: nha:Nham_0126 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; Imidazole glycerol phosphate synthase cyclase subunit complement(347706..348473) Rhodopseudomonas palustris DX-1 10062504 YP_004106689.1 CDS Rpdx1_0314 NC_014834.1 348484 349221 R TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: bbt:BBta_0145 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(348484..349221) Rhodopseudomonas palustris DX-1 10062505 YP_004106690.1 CDS Rpdx1_0315 NC_014834.1 349218 349517 R KEGG: cac:CAC1202 hypothetical protein; hypothetical protein complement(349218..349517) Rhodopseudomonas palustris DX-1 10062506 YP_004106691.1 CDS Rpdx1_0316 NC_014834.1 349519 350169 R KEGG: bbt:BBta_0146 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit complement(349519..350169) Rhodopseudomonas palustris DX-1 10062507 YP_004106692.1 CDS Rpdx1_0317 NC_014834.1 350166 350687 R KEGG: nwi:Nwi_0125 hypothetical protein; hypothetical protein complement(350166..350687) Rhodopseudomonas palustris DX-1 10062508 YP_004106693.1 CDS Rpdx1_0318 NC_014834.1 350715 351308 R KEGG: bja:blr0650 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase complement(350715..351308) Rhodopseudomonas palustris DX-1 10062509 YP_004106694.1 CDS Rpdx1_0319 NC_014834.1 351496 352059 D PFAM: 20S proteasome A and B subunits; KEGG: nha:Nham_0121 ATP-dependent protease peptidase subunit; 20S proteasome subunits A/B 351496..352059 Rhodopseudomonas palustris DX-1 10062510 YP_004106695.1 CDS Rpdx1_0320 NC_014834.1 352211 353512 D TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: nwi:Nwi_0129 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase; heat shock protein HslVU, ATPase subunit HslU 352211..353512 Rhodopseudomonas palustris DX-1 10062511 YP_004106696.1 CDS Rpdx1_0321 NC_014834.1 353876 354454 R KEGG: bra:BRADO0206 putative Smr protein/MutS2 C-terminal; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; Smr protein/MutS2 complement(353876..354454) Rhodopseudomonas palustris DX-1 10062512 YP_004106697.1 CDS Rpdx1_0322 NC_014834.1 354460 355887 R PFAM: MltA domain protein; 3D domain protein; KEGG: nha:Nham_0118 MltA; MltA domain-containing protein complement(354460..355887) Rhodopseudomonas palustris DX-1 10062513 YP_004106698.1 CDS Rpdx1_0323 NC_014834.1 355925 356701 R KEGG: bja:blr0642 hypothetical protein; manually curated; PFAM: import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 complement(355925..356701) Rhodopseudomonas palustris DX-1 10062514 YP_004106699.1 CDS Rpdx1_0324 NC_014834.1 357093 357566 D KEGG: nwi:Nwi_0106 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; protein-export protein SecB 357093..357566 Rhodopseudomonas palustris DX-1 10062515 YP_004106700.1 CDS Rpdx1_0325 NC_014834.1 357646 358344 R SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bja:blr0640 DNA polymerase III epsilon chain; PFAM: Exonuclease RNase T and DNA polymerase III; DNA polymerase III subunit epsilon complement(357646..358344) Rhodopseudomonas palustris DX-1 10062516 YP_004106701.1 CDS Rpdx1_0326 NC_014834.1 358384 358983 R TIGRFAM: dephospho-CoA kinase; KEGG: nha:Nham_0114 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(358384..358983) Rhodopseudomonas palustris DX-1 10062517 YP_004106702.1 CDS Rpdx1_0327 NC_014834.1 359074 359682 R PFAM: Maf family protein; KEGG: bja:blr0638 Maf-like protein; Maf family protein complement(359074..359682) Rhodopseudomonas palustris DX-1 10062518 YP_004106703.1 CDS Rpdx1_0328 NC_014834.1 359679 360518 R PFAM: protein of unknown function DUF299; KEGG: bbt:BBta_0161 hypothetical protein; hypothetical protein complement(359679..360518) Rhodopseudomonas palustris DX-1 10062519 YP_004106704.1 CDS Rpdx1_0329 NC_014834.1 360972 361412 D PFAM: conserved hypothetical protein; KEGG: bbt:BBta_0162 hypothetical protein; hypothetical protein 360972..361412 Rhodopseudomonas palustris DX-1 10062520 YP_004106705.1 CDS Rpdx1_0330 NC_014834.1 361675 362940 D TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: nwi:Nwi_0100 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho 361675..362940 Rhodopseudomonas palustris DX-1 10062521 YP_004106706.1 CDS Rpdx1_0331 NC_014834.1 363031 364359 D SMART: AAA ATPase; manually curated; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; KEGG: bja:bll0634 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; tRNA modification GTPase TrmE 363031..364359 Rhodopseudomonas palustris DX-1 10062522 YP_004106707.1 CDS Rpdx1_0332 NC_014834.1 364640 366508 D KEGG: nwi:Nwi_0097 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; glucose inhibited division protein A 364640..366508 Rhodopseudomonas palustris DX-1 10062523 YP_004106708.1 CDS Rpdx1_0333 NC_014834.1 366677 367348 D KEGG: bbt:BBta_0166 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB 366677..367348 Rhodopseudomonas palustris DX-1 10062524 YP_004106709.1 CDS Rpdx1_0334 NC_014834.1 367375 368229 D KEGG: nha:Nham_0103 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 367375..368229 Rhodopseudomonas palustris DX-1 10062525 YP_004106710.1 CDS Rpdx1_0335 NC_014834.1 368401 369291 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: nwi:Nwi_0094 ParB-like partition protein; SMART: ParB domain protein nuclease; parB-like partition protein 368401..369291 Rhodopseudomonas palustris DX-1 10062526 YP_004106711.1 CDS Rpdx1_0336 NC_014834.1 369766 370767 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sme:SM_b20636 putative transposase of insertion sequence ISRm19 protein; transposase IS116/IS110/IS902 family protein 369766..370767 Rhodopseudomonas palustris DX-1 10062527 YP_004106712.1 CDS Rpdx1_0337 NC_014834.1 370834 371865 R KEGG: bja:blr0629 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta complement(370834..371865) Rhodopseudomonas palustris DX-1 10062528 YP_004106713.1 CDS Rpdx1_0338 NC_014834.1 371922 372485 R PFAM: Protein of unknown function DUF2159, secreted; KEGG: nha:Nham_0099 hypothetical protein; hypothetical protein complement(371922..372485) Rhodopseudomonas palustris DX-1 10062529 YP_004106714.1 CDS Rpdx1_0339 NC_014834.1 372472 375102 R KEGG: bbt:BBta_0171 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; leucyl-tRNA synthetase complement(372472..375102) Rhodopseudomonas palustris DX-1 10062530 YP_004106715.1 CDS Rpdx1_0340 NC_014834.1 375307 376980 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bja:blr0624 hypothetical protein; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; diguanylate cyclase complement(375307..376980) Rhodopseudomonas palustris DX-1 10062531 YP_004106716.1 CDS Rpdx1_0341 NC_014834.1 377149 377808 D PFAM: alanine racemase domain protein; KEGG: bra:BRADO0186 putative signal peptide; alanine racemase domain-containing protein 377149..377808 Rhodopseudomonas palustris DX-1 10062532 YP_004106717.1 CDS Rpdx1_0342 NC_014834.1 377822 378391 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_0095 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(377822..378391) Rhodopseudomonas palustris DX-1 10062533 YP_004106718.1 CDS Rpdx1_0343 NC_014834.1 378558 379244 D KEGG: bja:bll0620 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 378558..379244 Rhodopseudomonas palustris DX-1 10062534 YP_004106719.1 CDS Rpdx1_0344 NC_014834.1 379284 379733 D KEGG: bja:bll0619 hypothetical protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; putative Crp/Fnr family transcriptional regulator 379284..379733 Rhodopseudomonas palustris DX-1 10062535 YP_004106720.1 CDS Rpdx1_0345 NC_014834.1 379734 380546 R KEGG: bra:BRADO0181 putative exodeoxyribonuclease III (XthA); TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth complement(379734..380546) Rhodopseudomonas palustris DX-1 10062536 YP_004106721.1 CDS Rpdx1_0346 NC_014834.1 380599 381195 R PFAM: Methyltransferase type 12; KEGG: msl:Msil_3873 methyltransferase type 12; type 12 methyltransferase complement(380599..381195) Rhodopseudomonas palustris DX-1 10062537 YP_004106722.1 CDS Rpdx1_0347 NC_014834.1 381207 382148 R PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bra:BRADO0223 putative signal peptide; outer membrane lipoprotein carrier protein LolA complement(381207..382148) Rhodopseudomonas palustris DX-1 10062538 YP_004106723.1 CDS Rpdx1_0348 NC_014834.1 382163 384637 R KEGG: bja:blr0616 cell division protein; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; cell division protein FtsK complement(382163..384637) Rhodopseudomonas palustris DX-1 10062539 YP_004106724.1 CDS Rpdx1_0349 NC_014834.1 384651 385877 R PFAM: aminotransferase class I and II; KEGG: nha:Nham_0089 aminotransferase, class I and II; class I/II aminotransferase complement(384651..385877) Rhodopseudomonas palustris DX-1 10062540 YP_004106725.1 CDS Rpdx1_0350 NC_014834.1 386014 386358 R PFAM: protein of unknown function DUF86; KEGG: mrd:Mrad2831_3537 hypothetical protein; hypothetical protein complement(386014..386358) Rhodopseudomonas palustris DX-1 10062541 YP_004106726.1 CDS Rpdx1_0351 NC_014834.1 386348 386773 R PFAM: DNA polymerase beta domain protein region; KEGG: cak:Caul_1178 DNA polymerase beta subunit; DNA polymerase beta domain-containing protein complement(386348..386773) Rhodopseudomonas palustris DX-1 10062542 YP_004106727.1 CDS Rpdx1_0353 NC_014834.1 388330 389772 R KEGG: bja:blr0613 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter; ammonium transporter complement(388330..389772) Rhodopseudomonas palustris DX-1 10062544 YP_004106728.1 CDS Rpdx1_0354 NC_014834.1 389810 390148 R PFAM: nitrogen regulatory protein P-II; KEGG: bja:blr0612 nitrogen regulatory protein PII; nitrogen regulatory protein P-II complement(389810..390148) Rhodopseudomonas palustris DX-1 10062545 YP_004106729.1 CDS Rpdx1_0355 NC_014834.1 390490 390828 R PFAM: nitrogen regulatory protein P-II; KEGG: bbt:BBta_0295 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(390490..390828) Rhodopseudomonas palustris DX-1 10062546 YP_004106730.1 CDS Rpdx1_0356 NC_014834.1 390967 391842 R KEGG: bbt:BBta_0297 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II complement(390967..391842) Rhodopseudomonas palustris DX-1 10062547 YP_004106731.1 CDS Rpdx1_0357 NC_014834.1 391974 393194 D KEGG: nwi:Nwi_0079 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; Ubiquinone biosynthesis hydroxylase 391974..393194 Rhodopseudomonas palustris DX-1 10062548 YP_004106732.1 CDS Rpdx1_0358 NC_014834.1 393325 393522 R PFAM: protein of unknown function DUF343; KEGG: nha:Nham_0083 hypothetical protein; hypothetical protein complement(393325..393522) Rhodopseudomonas palustris DX-1 10062549 YP_004106733.1 CDS Rpdx1_0359 NC_014834.1 393610 394287 R KEGG: bja:blr0595 hypothetical protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; peptidase S16 lon domain-containing protein complement(393610..394287) Rhodopseudomonas palustris DX-1 10062550 YP_004106734.1 CDS Rpdx1_0360 NC_014834.1 394315 395235 R KEGG: bra:BRADO0321 putative thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin complement(394315..395235) Rhodopseudomonas palustris DX-1 10062551 YP_004106735.1 CDS Rpdx1_0361 NC_014834.1 395866 397278 D PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: azl:AZL_019970 membrane bound O-acyl transferase; membrane bound O-acyl transferase 395866..397278 Rhodopseudomonas palustris DX-1 10062553 YP_004106736.1 CDS Rpdx1_0362 NC_014834.1 397281 398450 D KEGG: bav:BAV2623 cellulose acetylase subunit; hypothetical protein 397281..398450 Rhodopseudomonas palustris DX-1 10062554 YP_004106737.1 CDS Rpdx1_0363 NC_014834.1 398579 399415 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msl:Msil_2835 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(398579..399415) Rhodopseudomonas palustris DX-1 10062555 YP_004106738.1 CDS Rpdx1_0364 NC_014834.1 399412 400650 R KEGG: msl:Msil_2834 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal complement(399412..400650) Rhodopseudomonas palustris DX-1 10062556 YP_004106739.1 CDS Rpdx1_0365 NC_014834.1 400664 401536 R KEGG: msl:Msil_2833 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(400664..401536) Rhodopseudomonas palustris DX-1 10062557 YP_004106740.1 CDS Rpdx1_0366 NC_014834.1 401616 402497 R KEGG: bra:BRADO2770 putative thiosulfate sulfurtransferase (rhodanese-like protein); PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein complement(401616..402497) Rhodopseudomonas palustris DX-1 10062558 YP_004106741.1 CDS Rpdx1_0367 NC_014834.1 402625 403755 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mno:Mnod_1706 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(402625..403755) Rhodopseudomonas palustris DX-1 10062559 YP_004106742.1 CDS Rpdx1_0368 NC_014834.1 403790 404362 R PFAM: OsmC family protein; KEGG: xau:Xaut_2612 OsmC family protein; OsmC family protein complement(403790..404362) Rhodopseudomonas palustris DX-1 10062560 YP_004106743.1 CDS Rpdx1_0369 NC_014834.1 404621 405229 D PFAM: regulatory protein TetR; KEGG: bja:blr5739 transcriptional regulatory protein; regulatory protein TetR 404621..405229 Rhodopseudomonas palustris DX-1 10062561 YP_004106744.1 CDS Rpdx1_0370 NC_014834.1 405234 407195 R PFAM: acyltransferase 3; KEGG: oca:OCAR_5879 acyltransferase 3; acyltransferase 3 complement(405234..407195) Rhodopseudomonas palustris DX-1 10062562 YP_004106745.1 CDS Rpdx1_0371 NC_014834.1 407419 407847 D PFAM: protein of unknown function UPF0047; KEGG: cts:Ctha_1708 protein of unknown function UPF0047; hypothetical protein 407419..407847 Rhodopseudomonas palustris DX-1 10062563 YP_004106746.1 CDS Rpdx1_0372 NC_014834.1 407852 409150 D KEGG: alv:Alvin_2545 ribulose-bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; RuBisCO-like protein 407852..409150 Rhodopseudomonas palustris DX-1 10062564 YP_004106747.1 CDS Rpdx1_0373 NC_014834.1 409179 410264 R KEGG: nwi:Nwi_2399 hypothetical protein; hypothetical protein complement(409179..410264) Rhodopseudomonas palustris DX-1 10062565 YP_004106748.1 CDS Rpdx1_0374 NC_014834.1 410438 411229 R manually curated; KEGG: rce:RC1_2117 coenzyme B12-binding aerobic repressor; hypothetical protein complement(410438..411229) Rhodopseudomonas palustris DX-1 10062566 YP_004106749.1 CDS Rpdx1_0375 NC_014834.1 412079 412861 D KEGG: avi:Avi_4013 methyl-accepting chemotaxis protein; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; histidine kinase HAMP region domain-containing protein 412079..412861 Rhodopseudomonas palustris DX-1 10062567 YP_004106750.1 CDS Rpdx1_0376 NC_014834.1 413624 415321 R PFAM: HemY domain protein; KEGG: bja:bll0564 hypothetical protein; HemY domain-containing protein complement(413624..415321) Rhodopseudomonas palustris DX-1 10062569 YP_004106751.1 CDS Rpdx1_0377 NC_014834.1 415330 416745 R KEGG: nha:Nham_0564 hypothetical protein; hypothetical protein complement(415330..416745) Rhodopseudomonas palustris DX-1 10062570 YP_004106752.1 CDS Rpdx1_0378 NC_014834.1 416797 417543 R PFAM: Uroporphyrinogen III synthase HEM4; KEGG: bja:bll0566 uroporphyrinogen III synthase; uroporphyrinogen III synthase HEM4 complement(416797..417543) Rhodopseudomonas palustris DX-1 10062571 YP_004106753.1 CDS Rpdx1_0379 NC_014834.1 417783 418874 D TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: nwi:Nwi_0470 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 417783..418874 Rhodopseudomonas palustris DX-1 10062572 YP_004106754.1 CDS Rpdx1_0380 NC_014834.1 418911 419900 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bbt:BBta_0290 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 418911..419900 Rhodopseudomonas palustris DX-1 10062573 YP_004106755.1 CDS Rpdx1_0381 NC_014834.1 419903 420316 D PFAM: protein of unknown function DUF55; KEGG: bja:blr0569 hypothetical protein; hypothetical protein 419903..420316 Rhodopseudomonas palustris DX-1 10062574 YP_004106756.1 CDS Rpdx1_0382 NC_014834.1 420495 421157 D KEGG: xau:Xaut_1107 hypothetical protein; hypothetical protein 420495..421157 Rhodopseudomonas palustris DX-1 10062575 YP_004106757.1 CDS Rpdx1_0383 NC_014834.1 421167 422438 R TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; KEGG: bra:BRADO0384 putative MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein complement(421167..422438) Rhodopseudomonas palustris DX-1 10062576 YP_004106758.1 CDS Rpdx1_0384 NC_014834.1 422438 423319 R KEGG: nwi:Nwi_2776 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase complement(422438..423319) Rhodopseudomonas palustris DX-1 10062577 YP_004106759.1 CDS Rpdx1_0385 NC_014834.1 423556 424350 D PFAM: transcription activator effector binding; KEGG: bja:blr0478 hypothetical protein; transcription activator effector-binding protein 423556..424350 Rhodopseudomonas palustris DX-1 10062578 YP_004106760.1 CDS Rpdx1_0386 NC_014834.1 424347 425042 D PFAM: protein of unknown function DUF541; KEGG: nha:Nham_3577 hypothetical protein; hypothetical protein 424347..425042 Rhodopseudomonas palustris DX-1 10062579 YP_004106761.1 CDS Rpdx1_0387 NC_014834.1 425052 426026 R KEGG: bra:BRADO0380 putative metallo-hydrolase/oxidoreductase; putative metallo-hydrolase/oxidoreductase complement(425052..426026) Rhodopseudomonas palustris DX-1 10062580 YP_004106762.1 CDS Rpdx1_0388 NC_014834.1 426118 426522 R PFAM: PilT protein domain protein; KEGG: sus:Acid_1772 PilT protein; PilT domain-containing protein complement(426118..426522) Rhodopseudomonas palustris DX-1 10062581 YP_004106763.1 CDS Rpdx1_0389 NC_014834.1 426525 426770 R TIGRFAM: prevent-host-death family protein; KEGG: sus:Acid_1771 prevent-host-death family protein; prevent-host-death family protein complement(426525..426770) Rhodopseudomonas palustris DX-1 10062582 YP_004106764.1 CDS Rpdx1_0390 NC_014834.1 427037 428581 D TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: bbt:BBta_0368 signal recognition particle subunit FFH/SRP54 (SRP54); SMART: AAA ATPase; signal recognition particle protein 427037..428581 Rhodopseudomonas palustris DX-1 10062583 YP_004106765.1 CDS Rpdx1_0391 NC_014834.1 428753 429073 D KEGG: bra:BRADO0378 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; 30S ribosomal protein S16 428753..429073 Rhodopseudomonas palustris DX-1 10062584 YP_004106766.1 CDS Rpdx1_0392 NC_014834.1 429086 429616 D KEGG: bja:blr0483 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA processing protein RimM 429086..429616 Rhodopseudomonas palustris DX-1 10062585 YP_004106767.1 CDS Rpdx1_0393 NC_014834.1 429755 430501 D TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: bja:blr0486 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 429755..430501 Rhodopseudomonas palustris DX-1 10062586 YP_004106768.1 CDS Rpdx1_0394 NC_014834.1 430615 431004 D KEGG: nha:Nham_3582 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; 50S ribosomal protein L19 430615..431004 Rhodopseudomonas palustris DX-1 10062587 YP_004106769.1 CDS Rpdx1_0395 NC_014834.1 431315 432724 D KEGG: nha:Nham_3584 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase large subunit 431315..432724 Rhodopseudomonas palustris DX-1 10062588 YP_004106770.1 CDS Rpdx1_0396 NC_014834.1 432883 433170 R KEGG: nha:Nham_3587 hypothetical protein; hypothetical protein complement(432883..433170) Rhodopseudomonas palustris DX-1 10062589 YP_004106771.1 CDS Rpdx1_0397 NC_014834.1 433308 433595 R KEGG: bbt:BBta_0355 hypothetical protein; hypothetical protein complement(433308..433595) Rhodopseudomonas palustris DX-1 10062590 YP_004106772.1 CDS Rpdx1_0398 NC_014834.1 433834 434163 R KEGG: bra:BRADO0367 hypothetical protein; hypothetical protein complement(433834..434163) Rhodopseudomonas palustris DX-1 10062591 YP_004106773.1 CDS Rpdx1_0399 NC_014834.1 434270 434671 D PFAM: protein of unknown function DUF1025; KEGG: bja:blr0494 hypothetical protein; hypothetical protein 434270..434671 Rhodopseudomonas palustris DX-1 10062592 YP_004106774.1 CDS Rpdx1_0400 NC_014834.1 434757 435362 D KEGG: bja:blr0495 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 434757..435362 Rhodopseudomonas palustris DX-1 10062593 YP_004106775.1 CDS Rpdx1_0401 NC_014834.1 436094 437785 D KEGG: mag:amb3991 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 436094..437785 Rhodopseudomonas palustris DX-1 10062594 YP_004106776.1 CDS Rpdx1_0402 NC_014834.1 437954 438832 R KEGG: bbt:BBta_0347 putative citrate lyase beta chain; PFAM: HpcH/HpaI aldolase; citryl-coA lyase complement(437954..438832) Rhodopseudomonas palustris DX-1 10062595 YP_004106777.1 CDS Rpdx1_0403 NC_014834.1 439012 439656 D KEGG: bbt:BBta_0346 putative carbonic anhydrase 2; PFAM: carbonic anhydrase; carbonate dehydratase 439012..439656 Rhodopseudomonas palustris DX-1 10062596 YP_004106778.1 CDS Rpdx1_0404 NC_014834.1 439804 440358 R PFAM: conserved hypothetical protein; KEGG: bbt:BBta_0345 hypothetical protein; hypothetical protein complement(439804..440358) Rhodopseudomonas palustris DX-1 10062597 YP_004106779.1 CDS Rpdx1_0405 NC_014834.1 440493 441527 R TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: bbt:BBta_0344 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase complement(440493..441527) Rhodopseudomonas palustris DX-1 10062598 YP_004106780.1 CDS Rpdx1_0406 NC_014834.1 441643 442452 D KEGG: bbt:BBta_0343 hypothetical protein; hypothetical protein 441643..442452 Rhodopseudomonas palustris DX-1 10062599 YP_004106781.1 CDS Rpdx1_0407 NC_014834.1 442596 442997 D KEGG: nha:Nham_3594 hypothetical protein; hypothetical protein 442596..442997 Rhodopseudomonas palustris DX-1 10062600 YP_004106782.1 CDS Rpdx1_0408 NC_014834.1 443096 444466 D KEGG: rle:RL2002 putative transposase-related protein; manually curated; PFAM: transposase IS4 family protein; transposase IS4 family protein 443096..444466 Rhodopseudomonas palustris DX-1 10062601 YP_004106783.1 CDS Rpdx1_0409 NC_014834.1 444668 445780 R TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: nha:Nham_3595 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(444668..445780) Rhodopseudomonas palustris DX-1 10062602 YP_004106784.1 CDS Rpdx1_0410 NC_014834.1 445809 446006 D KEGG: bbt:BBta_7330 hypothetical protein; hypothetical protein 445809..446006 Rhodopseudomonas palustris DX-1 10062603 YP_004106785.1 CDS Rpdx1_0411 NC_014834.1 446003 447196 D KEGG: bja:blr0503 hypothetical protein; hypothetical protein 446003..447196 Rhodopseudomonas palustris DX-1 10062604 YP_004106786.1 CDS Rpdx1_0412 NC_014834.1 447351 448130 R PFAM: oxidoreductase molybdopterin binding; KEGG: nha:Nham_3598 oxidoreductase, molybdopterin binding; oxidoreductase molybdopterin-binding protein complement(447351..448130) Rhodopseudomonas palustris DX-1 10062605 YP_004106787.1 CDS Rpdx1_0413 NC_014834.1 448150 448788 R KEGG: nha:Nham_3599 hypothetical protein; hypothetical protein complement(448150..448788) Rhodopseudomonas palustris DX-1 10062606 YP_004106788.1 CDS Rpdx1_0414 NC_014834.1 449012 449587 R KEGG: bbt:BBta_0336 Fas1 domain-containing protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin complement(449012..449587) Rhodopseudomonas palustris DX-1 10062607 YP_004106789.1 CDS Rpdx1_0415 NC_014834.1 449861 451372 D PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0226 malonyl-CoA synthase; AMP-dependent synthetase and ligase 449861..451372 Rhodopseudomonas palustris DX-1 10062608 YP_004106790.1 CDS Rpdx1_0416 NC_014834.1 451729 452676 R KEGG: met:M446_3953 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter complement(451729..452676) Rhodopseudomonas palustris DX-1 10062609 YP_004106791.1 CDS Rpdx1_0417 NC_014834.1 453057 453455 D manually curated; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; KEGG: bja:blr0512 succinate dehydrogenase cytochrome b-556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 453057..453455 Rhodopseudomonas palustris DX-1 10062610 YP_004106792.1 CDS Rpdx1_0418 NC_014834.1 453452 453865 D KEGG: nha:Nham_3617 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; succinate dehydrogenase, hydrophobic membrane anchor protein 453452..453865 Rhodopseudomonas palustris DX-1 10062611 YP_004106793.1 CDS Rpdx1_0419 NC_014834.1 453869 455692 D KEGG: bbt:BBta_0230 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; succinate dehydrogenase, flavoprotein subunit 453869..455692 Rhodopseudomonas palustris DX-1 10062612 YP_004106794.1 CDS Rpdx1_0420 NC_014834.1 455831 456613 D KEGG: bja:blr0515 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 455831..456613 Rhodopseudomonas palustris DX-1 10062613 YP_004106795.1 CDS Rpdx1_0421 NC_014834.1 456849 457337 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bbt:BBta_0235 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 456849..457337 Rhodopseudomonas palustris DX-1 10062614 YP_004106796.1 CDS Rpdx1_0422 NC_014834.1 457338 457598 D KEGG: bbt:BBta_0236 hypothetical protein; hypothetical protein 457338..457598 Rhodopseudomonas palustris DX-1 10062615 YP_004106797.1 CDS Rpdx1_0423 NC_014834.1 457814 458842 R KEGG: lma:LmjF35.0290 hypothetical protein; hypothetical protein complement(457814..458842) Rhodopseudomonas palustris DX-1 10062616 YP_004106798.1 CDS Rpdx1_0424 NC_014834.1 458866 459870 D PFAM: OmpA/MotB domain protein; KEGG: bbt:BBta_0237 OmpA family protein; OmpA/MotB domain-containing protein 458866..459870 Rhodopseudomonas palustris DX-1 10062617 YP_004106799.1 CDS Rpdx1_0425 NC_014834.1 459966 460493 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr0574 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(459966..460493) Rhodopseudomonas palustris DX-1 10062618 YP_004106800.1 CDS Rpdx1_0426 NC_014834.1 460889 462841 R KEGG: bra:BRADO0344 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; acetate/CoA ligase complement(460889..462841) Rhodopseudomonas palustris DX-1 10062619 YP_004106801.1 CDS Rpdx1_0427 NC_014834.1 463195 464097 R PFAM: pseudouridine synthase; KEGG: bra:BRADO0385 putative RNA pseudouridine synthase (uracil hydrolyase); pseudouridine synthase complement(463195..464097) Rhodopseudomonas palustris DX-1 10062620 YP_004106802.1 CDS Rpdx1_0428 NC_014834.1 464126 465073 D TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: nha:Nham_0402 signal recognition particle-docking protein FtsY; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 464126..465073 Rhodopseudomonas palustris DX-1 10062621 YP_004106803.1 CDS Rpdx1_0429 NC_014834.1 465070 465687 D KEGG: nwi:Nwi_0317 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein A 465070..465687 Rhodopseudomonas palustris DX-1 10062622 YP_004106804.1 CDS Rpdx1_0430 NC_014834.1 465719 466102 R KEGG: mch:Mchl_2719 hypothetical protein; hypothetical protein complement(465719..466102) Rhodopseudomonas palustris DX-1 10062623 YP_004106805.1 CDS Rpdx1_0431 NC_014834.1 466243 466839 R KEGG: nwi:Nwi_0318 periplasmic protein thiol-disulfide oxidoreductase DsbE; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; protein thiol/disulfide oxidoreductase DsbE complement(466243..466839) Rhodopseudomonas palustris DX-1 10062624 YP_004106806.1 CDS Rpdx1_0432 NC_014834.1 466855 467028 R KEGG: nha:Nham_0412 heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); heme exporter protein CcmD complement(466855..467028) Rhodopseudomonas palustris DX-1 10062625 YP_004106807.1 CDS Rpdx1_0433 NC_014834.1 467028 467762 R KEGG: nwi:Nwi_0320 cytochrome c-type biogenesis protein CcmC; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; heme exporter protein CcmC complement(467028..467762) Rhodopseudomonas palustris DX-1 10062626 YP_004106808.1 CDS Rpdx1_0434 NC_014834.1 467933 468601 R KEGG: bja:blr0468 heme exporter protein B; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB complement(467933..468601) Rhodopseudomonas palustris DX-1 10062627 YP_004106809.1 CDS Rpdx1_0435 NC_014834.1 468598 469200 R TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: bja:blr0467 cytochrome c biogenesis protein CcmA; SMART: AAA ATPase; heme exporter protein CcmA complement(468598..469200) Rhodopseudomonas palustris DX-1 10062628 YP_004106810.1 CDS Rpdx1_0436 NC_014834.1 469416 472133 D KEGG: bbt:BBta_0382 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; aconitate hydratase 1 469416..472133 Rhodopseudomonas palustris DX-1 10062629 YP_004106811.1 CDS Rpdx1_0437 NC_014834.1 472314 473069 D PFAM: protein of unknown function DUF1223; KEGG: bja:bll0465 hypothetical protein; hypothetical protein 472314..473069 Rhodopseudomonas palustris DX-1 10062630 YP_004106812.1 CDS Rpdx1_0438 NC_014834.1 473490 473858 D KEGG: nha:Nham_0406 hypothetical protein; hypothetical protein 473490..473858 Rhodopseudomonas palustris DX-1 10062631 YP_004106813.1 CDS Rpdx1_0439 NC_014834.1 473969 474499 R KEGG: bja:blr0463 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; phosphinothricin acetyltransferase complement(473969..474499) Rhodopseudomonas palustris DX-1 10062632 YP_004106814.1 CDS Rpdx1_0440 NC_014834.1 474656 475447 R PFAM: protein of unknown function UPF0005; KEGG: oca:OCAR_4575 integral membrane protein; hypothetical protein complement(474656..475447) Rhodopseudomonas palustris DX-1 10062633 YP_004106815.1 CDS Rpdx1_0441 NC_014834.1 475795 478368 R PFAM: protein of unknown function DUF214; KEGG: bja:blr0461 ABC transporter permease; hypothetical protein complement(475795..478368) Rhodopseudomonas palustris DX-1 10062634 YP_004106816.1 CDS Rpdx1_0442 NC_014834.1 478372 479115 R KEGG: bja:blr0460 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(478372..479115) Rhodopseudomonas palustris DX-1 10062635 YP_004106817.1 CDS Rpdx1_0443 NC_014834.1 479195 479812 D PFAM: lipolytic protein G-D-S-L family; KEGG: bra:BRADO0400 multifunctional: acyl-CoA thioesterase I; protease I; lysophospholipasel(I); G-D-S-L family lipolytic protein 479195..479812 Rhodopseudomonas palustris DX-1 10062636 YP_004106818.1 CDS Rpdx1_0444 NC_014834.1 480019 480558 D KEGG: bra:BRADO0401 putative 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; 2'-5' RNA ligase 480019..480558 Rhodopseudomonas palustris DX-1 10062637 YP_004106819.1 CDS Rpdx1_0445 NC_014834.1 480645 481829 D PFAM: AFG1-family ATPase; KEGG: bra:BRADO0402 AFG1 family ATPase; AFG1 family ATPase 480645..481829 Rhodopseudomonas palustris DX-1 10062638 YP_004106820.1 CDS Rpdx1_0446 NC_014834.1 481974 482942 D KEGG: bbt:BBta_0392 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase 481974..482942 Rhodopseudomonas palustris DX-1 10062639 YP_004106821.1 CDS Rpdx1_0447 NC_014834.1 483038 484234 D TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: oca:OCAR_6554 succinyl-CoA synthetase beta chain (SCS-alpha); PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit beta 483038..484234 Rhodopseudomonas palustris DX-1 10062640 YP_004106822.1 CDS Rpdx1_0448 NC_014834.1 484299 485183 D KEGG: bbt:BBta_0394 succinyl-CoA synthetase (ADP-forming) alpha subunit; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; succinyl-CoA synthetase subunit alpha 484299..485183 Rhodopseudomonas palustris DX-1 10062641 YP_004106823.1 CDS Rpdx1_0449 NC_014834.1 485311 488268 D KEGG: bbt:BBta_0395 2-oxoglutarate dehydrogenase E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; 2-oxoglutarate dehydrogenase, E1 subunit 485311..488268 Rhodopseudomonas palustris DX-1 10062642 YP_004106824.1 CDS Rpdx1_0450 NC_014834.1 488368 489609 D KEGG: bra:BRADO0407 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 488368..489609 Rhodopseudomonas palustris DX-1 10062643 YP_004106825.1 CDS Rpdx1_0451 NC_014834.1 489675 490067 D KEGG: bmr:BMI_I1943 hypothetical protein; hypothetical protein 489675..490067 Rhodopseudomonas palustris DX-1 10062644 YP_004106826.1 CDS Rpdx1_0452 NC_014834.1 490075 490821 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO0408 oxidoreductase; short-chain dehydrogenase/reductase SDR 490075..490821 Rhodopseudomonas palustris DX-1 10062645 YP_004106827.1 CDS Rpdx1_0453 NC_014834.1 490853 492256 D KEGG: bbt:BBta_0398 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; dihydrolipoamide dehydrogenase 490853..492256 Rhodopseudomonas palustris DX-1 10062646 YP_004106828.1 CDS Rpdx1_0454 NC_014834.1 492283 492840 D KEGG: bja:bll0448 hypothetical protein; hypothetical protein 492283..492840 Rhodopseudomonas palustris DX-1 10062647 YP_004106829.1 CDS Rpdx1_0455 NC_014834.1 492946 494388 D KEGG: rmr:Rmar_2078 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter 492946..494388 Rhodopseudomonas palustris DX-1 10062648 YP_004106830.1 CDS Rpdx1_0456 NC_014834.1 494394 494984 R KEGG: oca:OCAR_4586 hypothetical protein; hypothetical protein complement(494394..494984) Rhodopseudomonas palustris DX-1 10062649 YP_004106831.1 CDS Rpdx1_0457 NC_014834.1 495125 496096 R PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bja:blr0446 site-specific tyrosine recombinase XerC; integrase family protein complement(495125..496096) Rhodopseudomonas palustris DX-1 10062650 YP_004106832.1 CDS Rpdx1_0458 NC_014834.1 496293 498503 D TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: nha:Nham_0535 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' 496293..498503 Rhodopseudomonas palustris DX-1 10062651 YP_004106833.1 CDS Rpdx1_0459 NC_014834.1 498674 499150 R KEGG: bja:blr044 hypothetical protein; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; rare lipoprotein A complement(498674..499150) Rhodopseudomonas palustris DX-1 10062652 YP_004106834.1 CDS Rpdx1_0460 NC_014834.1 499853 500413 D KEGG: nwi:Nwi_0429 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 499853..500413 Rhodopseudomonas palustris DX-1 10062653 YP_004106835.1 CDS Rpdx1_0461 NC_014834.1 500413 501945 D KEGG: nha:Nham_0532 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha 500413..501945 Rhodopseudomonas palustris DX-1 10062654 YP_004106836.1 CDS Rpdx1_0462 NC_014834.1 502089 502964 D KEGG: nha:Nham_0531 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; ATP synthase F1 subunit gamma 502089..502964 Rhodopseudomonas palustris DX-1 10062655 YP_004106837.1 CDS Rpdx1_0463 NC_014834.1 503036 504466 D TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: nha:Nham_0529 F0F1 ATP synthase subunit beta; SMART: AAA ATPase; ATP synthase F1 subunit beta 503036..504466 Rhodopseudomonas palustris DX-1 10062656 YP_004106838.1 CDS Rpdx1_0464 NC_014834.1 504583 505002 D KEGG: nwi:Nwi_0434 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; ATP synthase F1 subunit epsilon 504583..505002 Rhodopseudomonas palustris DX-1 10062657 YP_004106839.1 CDS Rpdx1_0465 NC_014834.1 505204 505713 R PFAM: NUDIX hydrolase; KEGG: bja:blr0437 dinucleoside polyphosphate hydrolase; NUDIX hydrolase complement(505204..505713) Rhodopseudomonas palustris DX-1 10062658 YP_004106840.1 CDS Rpdx1_0466 NC_014834.1 505710 506657 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(505710..506657) Rhodopseudomonas palustris DX-1 10062659 YP_004106841.1 CDS Rpdx1_0467 NC_014834.1 506876 507946 D KEGG: mea:Mex_1p4746 hypothetical protein; hypothetical protein 506876..507946 Rhodopseudomonas palustris DX-1 10062660 YP_004106842.1 CDS Rpdx1_0468 NC_014834.1 508022 508528 R PFAM: NUDIX hydrolase; KEGG: bja:blr0436 dinucleoside polyphosphate hydrolase; NUDIX hydrolase complement(508022..508528) Rhodopseudomonas palustris DX-1 10062661 YP_004106843.1 CDS Rpdx1_0469 NC_014834.1 508568 509806 R PFAM: protein of unknown function DUF610 YibQ; KEGG: nha:Nham_0526 protein of unknown function DUF610, YibQ; hypothetical protein complement(508568..509806) Rhodopseudomonas palustris DX-1 10062662 YP_004106844.1 CDS Rpdx1_0470 NC_014834.1 510158 511537 R SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: bja:blr0434 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease complement(510158..511537) Rhodopseudomonas palustris DX-1 10062663 YP_004106845.1 CDS Rpdx1_0471 NC_014834.1 511534 512934 R KEGG: nha:Nham_0524 peptidase M23B; manually curated; PFAM: Peptidase M23; peptidase M23 complement(511534..512934) Rhodopseudomonas palustris DX-1 10062664 YP_004106846.1 CDS Rpdx1_0472 NC_014834.1 512954 513427 R PFAM: protein of unknown function DUF163; KEGG: bra:BRADO0427 hypothetical protein; hypothetical protein complement(512954..513427) Rhodopseudomonas palustris DX-1 10062665 YP_004106847.1 CDS Rpdx1_0473 NC_014834.1 513530 513826 R KEGG: bbt:BBta_0417 hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein complement(513530..513826) Rhodopseudomonas palustris DX-1 10062666 YP_004106848.1 CDS Rpdx1_0474 NC_014834.1 514195 514824 R TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; KEGG: bja:blr0430 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(514195..514824) Rhodopseudomonas palustris DX-1 10062667 YP_004106849.1 CDS Rpdx1_0475 NC_014834.1 514849 516141 R KEGG: bja:blr0429 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase complement(514849..516141) Rhodopseudomonas palustris DX-1 10062668 YP_004106850.1 CDS Rpdx1_0476 NC_014834.1 516265 516546 D TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: mpo:Mpop_0594 putative addiction module antidote protein, CopG/Arc/MetJ family; addiction module antidote protein 516265..516546 Rhodopseudomonas palustris DX-1 10062669 YP_004106851.1 CDS Rpdx1_0478 NC_014834.1 516834 517964 R TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: bbt:BBta_0422 gamma-glutamyl kinase; SMART: PUA domain containing protein; glutamate 5-kinase complement(516834..517964) Rhodopseudomonas palustris DX-1 10062671 YP_004106852.1 CDS Rpdx1_0479 NC_014834.1 518122 519183 R KEGG: bra:BRADO0432 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP-binding protein Obg/CgtA complement(518122..519183) Rhodopseudomonas palustris DX-1 10062672 YP_004106853.1 CDS Rpdx1_0480 NC_014834.1 519335 520234 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbt:BBta_0424 DMT family permease; hypothetical protein 519335..520234 Rhodopseudomonas palustris DX-1 10062673 YP_004106854.1 CDS Rpdx1_0481 NC_014834.1 520235 520408 R KEGG: der:Dere_GG10289 GG10289 gene product from transcript GG10289-RA; hypothetical protein complement(520235..520408) Rhodopseudomonas palustris DX-1 10062674 YP_004106855.1 CDS Rpdx1_0482 NC_014834.1 520539 520730 R KEGG: ecb:100060039 hypothetical LOC100060039; hypothetical protein complement(520539..520730) Rhodopseudomonas palustris DX-1 10062675 YP_004106856.1 CDS Rpdx1_0483 NC_014834.1 520934 521533 R PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_0516 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(520934..521533) Rhodopseudomonas palustris DX-1 10062676 YP_004106857.1 CDS Rpdx1_0484 NC_014834.1 521669 521941 R KEGG: nha:Nham_0515 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; 50S ribosomal protein L27 complement(521669..521941) Rhodopseudomonas palustris DX-1 10062677 YP_004106858.1 CDS Rpdx1_0485 NC_014834.1 522029 522409 R KEGG: nha:Nham_0514 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; 50S ribosomal protein L21 complement(522029..522409) Rhodopseudomonas palustris DX-1 10062678 YP_004106859.1 CDS Rpdx1_0486 NC_014834.1 522739 523890 D KEGG: bra:BRADO0437 putative glucokinase; putative glucokinase 522739..523890 Rhodopseudomonas palustris DX-1 10062679 YP_004106860.1 CDS Rpdx1_0487 NC_014834.1 524318 525634 R KEGG: bja:bll1985 HipA protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; HipA N-terminal domain-containing protein complement(524318..525634) Rhodopseudomonas palustris DX-1 10062681 YP_004106861.1 CDS Rpdx1_0488 NC_014834.1 525636 525890 R KEGG: bja:bsl1986 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(525636..525890) Rhodopseudomonas palustris DX-1 10062682 YP_004106862.1 CDS Rpdx1_0489 NC_014834.1 526109 527110 D PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: bja:bll6944 HupU protein; NADH ubiquinone oxidoreductase 20 kDa subunit 526109..527110 Rhodopseudomonas palustris DX-1 10062683 YP_004106863.1 CDS Rpdx1_0490 NC_014834.1 527107 528552 D PFAM: nickel-dependent hydrogenase large subunit; KEGG: bja:bll6943 HupV protein; nickel-dependent hydrogenase large subunit 527107..528552 Rhodopseudomonas palustris DX-1 10062684 YP_004106864.1 CDS Rpdx1_0491 NC_014834.1 528788 529900 D TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: bja:bll6942 uptake hydrogenase precursor; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; hydrogenase (NiFe) small subunit HydA 528788..529900 Rhodopseudomonas palustris DX-1 10062685 YP_004106865.1 CDS Rpdx1_0492 NC_014834.1 529919 531712 D PFAM: nickel-dependent hydrogenase large subunit; KEGG: bbt:BBta_1997 uptake hydrogenase large subunit precursor; nickel-dependent hydrogenase large subunit 529919..531712 Rhodopseudomonas palustris DX-1 10062686 YP_004106866.1 CDS Rpdx1_0493 NC_014834.1 531729 532457 D TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; KEGG: bja:blr6947 Ni/Fe-hydrogenase B-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 531729..532457 Rhodopseudomonas palustris DX-1 10062687 YP_004106867.1 CDS Rpdx1_0494 NC_014834.1 532585 533172 D KEGG: bja:bll6939 HupD protein; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; hydrogenase expression/formation protein 532585..533172 Rhodopseudomonas palustris DX-1 10062688 YP_004106868.1 CDS Rpdx1_0495 NC_014834.1 533186 533779 D KEGG: xau:Xaut_2188 HupE/UreJ protein; HupE/UreJ protein 533186..533779 Rhodopseudomonas palustris DX-1 10062689 YP_004106869.1 CDS Rpdx1_0496 NC_014834.1 533801 534103 D KEGG: bja:bsl6938 hydrogenase expression/formation protein; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 533801..534103 Rhodopseudomonas palustris DX-1 10062690 YP_004106870.1 CDS Rpdx1_0497 NC_014834.1 534324 534725 D PFAM: hydrogenase-1 expression HyaE; KEGG: bra:BRADO1689 hydrogenase expression/formation protein HupG; hydrogenase-1 expression HyaE 534324..534725 Rhodopseudomonas palustris DX-1 10062691 YP_004106871.1 CDS Rpdx1_0498 NC_014834.1 534722 535588 D PFAM: HupH hydrogenase expression protein; KEGG: bra:BRADO1690 hydrogenase expression/formation protein HupH; HupH hydrogenase expression protein 534722..535588 Rhodopseudomonas palustris DX-1 10062692 YP_004106872.1 CDS Rpdx1_0499 NC_014834.1 535585 535797 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: azo:azo3796 rubredoxin protein; rubredoxin-type Fe(Cys)4 protein 535585..535797 Rhodopseudomonas palustris DX-1 10062693 YP_004106873.1 CDS Rpdx1_0500 NC_014834.1 535787 536314 D KEGG: bbt:BBta_2004 hydrogenase expression/formation; hydrogenase expression/formation 535787..536314 Rhodopseudomonas palustris DX-1 10062694 YP_004106874.1 CDS Rpdx1_0501 NC_014834.1 536311 537420 D KEGG: bbt:BBta_2005 hydrogenase expression/formation; hydrogenase expression/formation 536311..537420 Rhodopseudomonas palustris DX-1 10062695 YP_004106875.1 CDS Rpdx1_0502 NC_014834.1 537413 537754 D KEGG: bja:bll6932 HypA protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; hydrogenase nickel incorporation protein HypA 537413..537754 Rhodopseudomonas palustris DX-1 10062696 YP_004106876.1 CDS Rpdx1_0503 NC_014834.1 538042 538737 D KEGG: msl:Msil_2744 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; hydrogenase nickel incorporation protein HypB 538042..538737 Rhodopseudomonas palustris DX-1 10062697 YP_004106877.1 CDS Rpdx1_0504 NC_014834.1 538742 540994 D KEGG: bja:bll6930 hydrogenase maturation protein; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; (NiFe) hydrogenase maturation protein HypF 538742..540994 Rhodopseudomonas palustris DX-1 10062698 YP_004106878.1 CDS Rpdx1_0505 NC_014834.1 540994 541227 D KEGG: bja:bsl6929 hydrogenase expression/formation protein; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 540994..541227 Rhodopseudomonas palustris DX-1 10062699 YP_004106879.1 CDS Rpdx1_0506 NC_014834.1 541224 542366 D KEGG: bja:bll6928 HypD' protein; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 541224..542366 Rhodopseudomonas palustris DX-1 10062700 YP_004106880.1 CDS Rpdx1_0507 NC_014834.1 542363 543409 D KEGG: bbt:BBta_2011 hydrogenase maturation; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; hydrogenase expression/formation protein HypE 542363..543409 Rhodopseudomonas palustris DX-1 10062701 YP_004106881.1 CDS Rpdx1_0508 NC_014834.1 543449 544897 D KEGG: bra:BRADO1701 two component sigma-54-dependent hydrogenase fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; Fis family two component sigma54 specific transcriptional regulator 543449..544897 Rhodopseudomonas palustris DX-1 10062702 YP_004106882.1 CDS Rpdx1_0509 NC_014834.1 544890 546239 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bja:bll6924 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase 544890..546239 Rhodopseudomonas palustris DX-1 10062703 YP_004106883.1 CDS Rpdx1_0510 NC_014834.1 546469 548178 R KEGG: bja:blr2350 hypothetical protein; hypothetical protein complement(546469..548178) Rhodopseudomonas palustris DX-1 10062704 YP_004106884.1 CDS Rpdx1_0511 NC_014834.1 548186 549277 R PFAM: CheB methylesterase; response regulator receiver; KEGG: bbt:BBta_6730 chemotaxis response regulator protein CheB-glutamate methylesterase; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase complement(548186..549277) Rhodopseudomonas palustris DX-1 10062705 YP_004106885.1 CDS Rpdx1_0512 NC_014834.1 549298 550155 R PFAM: MCP methyltransferase CheR-type; KEGG: bja:blr2348 protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; CheR-type MCP methyltransferase complement(549298..550155) Rhodopseudomonas palustris DX-1 10062706 YP_004106886.1 CDS Rpdx1_0513 NC_014834.1 550305 552113 R KEGG: bja:blr2347 putative sensory transducer protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(550305..552113) Rhodopseudomonas palustris DX-1 10062707 YP_004106887.1 CDS Rpdx1_0514 NC_014834.1 552180 552662 R KEGG: bbt:BBta_7835 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein complement(552180..552662) Rhodopseudomonas palustris DX-1 10062708 YP_004106888.1 CDS Rpdx1_0515 NC_014834.1 552723 553190 R KEGG: bbt:BBta_6736 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein complement(552723..553190) Rhodopseudomonas palustris DX-1 10062709 YP_004106889.1 CDS Rpdx1_0516 NC_014834.1 553190 555211 R KEGG: bbt:BBta_6737 chemotaxis protein CheA; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; CheA signal transduction histidine kinase complement(553190..555211) Rhodopseudomonas palustris DX-1 10062710 YP_004106890.1 CDS Rpdx1_0517 NC_014834.1 555208 555573 R KEGG: bja:blr2342 chemotaxis two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(555208..555573) Rhodopseudomonas palustris DX-1 10062711 YP_004106891.1 CDS Rpdx1_0518 NC_014834.1 555573 555896 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bja:blr2341 hypothetical protein; sulfate transporter/antisigma-factor antagonist STAS complement(555573..555896) Rhodopseudomonas palustris DX-1 10062712 YP_004106892.1 CDS Rpdx1_0519 NC_014834.1 556197 557315 D KEGG: bja:bll2340 two-component response regulator; PFAM: metal-dependent phosphohydrolase HD sub domain; response regulator receiver; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; response regulator receiver modulated metal dependent phosphohydrolase 556197..557315 Rhodopseudomonas palustris DX-1 10062713 YP_004106893.1 CDS Rpdx1_0520 NC_014834.1 557337 557678 R KEGG: pla:Plav_0565 hypothetical protein; hypothetical protein complement(557337..557678) Rhodopseudomonas palustris DX-1 10062714 YP_004106894.1 CDS Rpdx1_0521 NC_014834.1 557675 560209 R KEGG: pla:Plav_0564 cytochrome c oxidase subunit I type; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I complement(557675..560209) Rhodopseudomonas palustris DX-1 10062715 YP_004106895.1 CDS Rpdx1_0522 NC_014834.1 560206 560907 R KEGG: nwi:Nwi_2313 cytochrome c oxidase, subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c oxidase subunit II complement(560206..560907) Rhodopseudomonas palustris DX-1 10062716 YP_004106896.1 CDS Rpdx1_0523 NC_014834.1 560929 561411 D KEGG: protein of unknown function DUF2231, transmembrane; hypothetical protein 560929..561411 Rhodopseudomonas palustris DX-1 10062717 YP_004106897.1 CDS Rpdx1_0524 NC_014834.1 561375 561869 R KEGG: pla:Plav_0562 hypothetical protein; hypothetical protein complement(561375..561869) Rhodopseudomonas palustris DX-1 10062718 YP_004106898.1 CDS Rpdx1_0525 NC_014834.1 561866 562600 R PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: nwi:Nwi_2311 hypothetical protein; caa3-type cytochrome c oxidase assembly factor CtaG-like protein complement(561866..562600) Rhodopseudomonas palustris DX-1 10062719 YP_004106899.1 CDS Rpdx1_0526 NC_014834.1 562984 564120 R KEGG: nha:Nham_0500 hypothetical protein; hypothetical protein complement(562984..564120) Rhodopseudomonas palustris DX-1 10062720 YP_004106900.1 CDS Rpdx1_0527 NC_014834.1 564144 566045 R SMART: von Willebrand factor type A; TIGRFAM: cobalt chelatase, pCobT subunit; KEGG: bbt:BBta_7564 aerobic cobaltochelatase subunit CobT; PFAM: Cobalt chelatase CobT subunit; cobalt chelatase large subunit complement(564144..566045) Rhodopseudomonas palustris DX-1 10062721 YP_004106901.1 CDS Rpdx1_0528 NC_014834.1 566051 566563 R PFAM: protein of unknown function DUF29; KEGG: mrd:Mrad2831_3699 hypothetical protein; hypothetical protein complement(566051..566563) Rhodopseudomonas palustris DX-1 10062722 YP_004106902.1 CDS Rpdx1_0529 NC_014834.1 566610 567605 R TIGRFAM: cobalt chelatase, pCobS small subunit; KEGG: oca:OCAR_4070 cobaltochelatase, CobS subunit; PFAM: ATPase associated with various cellular activities AAA_5; cobalt chelatase small subunit complement(566610..567605) Rhodopseudomonas palustris DX-1 10062723 YP_004106903.1 CDS Rpdx1_0530 NC_014834.1 567882 568505 D PFAM: SNARE associated Golgi protein; KEGG: bja:blr0181 hypothetical protein; hypothetical protein 567882..568505 Rhodopseudomonas palustris DX-1 10062724 YP_004106904.1 CDS Rpdx1_0531 NC_014834.1 568625 569269 R KEGG: nha:Nham_0496 heat shock protein DnaJ-like; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(568625..569269) Rhodopseudomonas palustris DX-1 10062725 YP_004106905.1 CDS Rpdx1_0532 NC_014834.1 569387 569656 D PFAM: BolA family protein; KEGG: nha:Nham_0495 BolA-like protein; BolA family protein 569387..569656 Rhodopseudomonas palustris DX-1 10062726 YP_004106906.1 CDS Rpdx1_0533 NC_014834.1 569751 571067 R PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bbt:BBta_7571 CBS domain-containing protein; hypothetical protein complement(569751..571067) Rhodopseudomonas palustris DX-1 10062727 YP_004106907.1 CDS Rpdx1_0534 NC_014834.1 571082 572230 R KEGG: bja:bll0187 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase complement(571082..572230) Rhodopseudomonas palustris DX-1 10062728 YP_004106908.1 CDS Rpdx1_0535 NC_014834.1 572227 572844 R KEGG: nha:Nham_0490 shikimate kinase; PFAM: shikimate kinase; shikimate kinase complement(572227..572844) Rhodopseudomonas palustris DX-1 10062729 YP_004106909.1 CDS Rpdx1_0536 NC_014834.1 572980 573126 D KEGG: bja:bsr0189 hypothetical protein; hypothetical protein 572980..573126 Rhodopseudomonas palustris DX-1 10062730 YP_004106910.1 CDS Rpdx1_0537 NC_014834.1 573176 574159 D KEGG: nha:Nham_0488 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; tyrosine recombinase XerD 573176..574159 Rhodopseudomonas palustris DX-1 10062731 YP_004106911.1 CDS Rpdx1_0538 NC_014834.1 574272 574895 D PFAM: transcriptional regulator PadR family protein; KEGG: acr:Acry_2218 PadR-like family transcriptional regulator; PadR-like family transcriptional regulator 574272..574895 Rhodopseudomonas palustris DX-1 10062732 YP_004106912.1 CDS Rpdx1_0539 NC_014834.1 574938 576074 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; KEGG: nwi:Nwi_0392 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 574938..576074 Rhodopseudomonas palustris DX-1 10062733 YP_004106913.1 CDS Rpdx1_0540 NC_014834.1 576447 577880 D KEGG: bra:BRADO0605 putative exported protein; putative transcriptional regulatory protein at C-terminal; putative transcriptional regulatory protein 576447..577880 Rhodopseudomonas palustris DX-1 10062734 YP_004106914.1 CDS Rpdx1_0541 NC_014834.1 578120 580960 R KEGG: bja:bll0204 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; preprotein translocase subunit SecA complement(578120..580960) Rhodopseudomonas palustris DX-1 10062735 YP_004106915.1 CDS Rpdx1_0542 NC_014834.1 581303 582220 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bja:blr0205 hypothetical protein; PpiC-type peptidyl-prolyl cis-trans isomerase 581303..582220 Rhodopseudomonas palustris DX-1 10062736 YP_004106916.1 CDS Rpdx1_0543 NC_014834.1 582313 585036 R TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: bja:bll0924 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; DNA mismatch repair protein MutS complement(582313..585036) Rhodopseudomonas palustris DX-1 10062737 YP_004106917.1 CDS Rpdx1_0544 NC_014834.1 585199 586407 D TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; KEGG: bja:blr0925 beta-ketoadipyl CoA thiolase; PFAM: Thiolase-like; beta-ketoadipyl CoA thiolase 585199..586407 Rhodopseudomonas palustris DX-1 10062738 YP_004106918.1 CDS Rpdx1_0545 NC_014834.1 586575 588137 R KEGG: bbt:BBta_7638 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter complement(586575..588137) Rhodopseudomonas palustris DX-1 10062739 YP_004106919.1 CDS Rpdx1_0546 NC_014834.1 588141 589307 R PFAM: secretion protein HlyD family protein; KEGG: bra:BRADO0542 efflux pump protein; secretion protein HlyD family protein complement(588141..589307) Rhodopseudomonas palustris DX-1 10062740 YP_004106920.1 CDS Rpdx1_0547 NC_014834.1 589325 589786 R KEGG: bja:bll0933 transcriptional regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator complement(589325..589786) Rhodopseudomonas palustris DX-1 10062741 YP_004106921.1 CDS Rpdx1_0548 NC_014834.1 589989 590477 D PFAM: ferric-uptake regulator; KEGG: nha:Nham_0618 ferric uptake regulator family protein; Fur family ferric uptake regulator 589989..590477 Rhodopseudomonas palustris DX-1 10062742 YP_004106922.1 CDS Rpdx1_0549 NC_014834.1 590643 591566 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr0935 hypothetical protein; hypothetical protein 590643..591566 Rhodopseudomonas palustris DX-1 10062743 YP_004106923.1 CDS Rpdx1_0550 NC_014834.1 591580 592875 D KEGG: bja:blr0936 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 591580..592875 Rhodopseudomonas palustris DX-1 10062744 YP_004106924.1 CDS Rpdx1_0551 NC_014834.1 593219 593326 R hypothetical protein complement(593219..593326) Rhodopseudomonas palustris DX-1 10062745 YP_004106925.1 CDS Rpdx1_0552 NC_014834.1 593407 595068 D TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: met:M446_1827 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 593407..595068 Rhodopseudomonas palustris DX-1 10062746 YP_004106926.1 CDS Rpdx1_0553 NC_014834.1 595086 595529 D PFAM: BLUF domain protein; KEGG: mch:Mchl_4401 BLUF domain protein; BLUF domain-containing protein 595086..595529 Rhodopseudomonas palustris DX-1 10062747 YP_004106927.1 CDS Rpdx1_0554 NC_014834.1 595540 596466 R PFAM: Polyprenyl synthetase; KEGG: bja:bll0946 geranyltranstransferase; polyprenyl synthetase complement(595540..596466) Rhodopseudomonas palustris DX-1 10062748 YP_004106928.1 CDS Rpdx1_0555 NC_014834.1 596567 597271 D KEGG: nha:Nham_0624 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; monofunctional biosynthetic peptidoglycan transglycosylase 596567..597271 Rhodopseudomonas palustris DX-1 10062749 YP_004106929.1 CDS Rpdx1_0556 NC_014834.1 597433 597615 D KEGG: bra:BRADO0557 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; 50S ribosomal protein L32 597433..597615 Rhodopseudomonas palustris DX-1 10062750 YP_004106930.1 CDS Rpdx1_0557 NC_014834.1 597866 598504 D KEGG: bbt:BBta_7618 hypothetical protein; hypothetical protein 597866..598504 Rhodopseudomonas palustris DX-1 10062751 YP_004106931.1 CDS Rpdx1_0558 NC_014834.1 598525 598839 R KEGG: nha:Nham_0627 hypothetical protein; hypothetical protein complement(598525..598839) Rhodopseudomonas palustris DX-1 10062752 YP_004106932.1 CDS Rpdx1_0559 NC_014834.1 599078 600148 D KEGG: bja:blr0951 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 599078..600148 Rhodopseudomonas palustris DX-1 10062753 YP_004106933.1 CDS Rpdx1_0560 NC_014834.1 600425 601015 R KEGG: bbt:BBta_7615 putative polyhydroxyalkanoate synthesis repressor PhaR-like protein; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein; polyhydroxyalkonate synthesis repressor PhaR complement(600425..601015) Rhodopseudomonas palustris DX-1 10062754 YP_004106934.1 CDS Rpdx1_0561 NC_014834.1 601287 602465 D TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bja:bll0226 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 601287..602465 Rhodopseudomonas palustris DX-1 10062755 YP_004106935.1 CDS Rpdx1_0562 NC_014834.1 602647 603372 D KEGG: bja:bll0225 acetoacetyl CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; acetoacetyl-CoA reductase 602647..603372 Rhodopseudomonas palustris DX-1 10062756 YP_004106936.1 CDS Rpdx1_0563 NC_014834.1 603449 604315 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_3690 hypothetical protein; hypothetical protein 603449..604315 Rhodopseudomonas palustris DX-1 10062757 YP_004106937.1 CDS Rpdx1_0564 NC_014834.1 604353 604871 R KEGG: bbt:BBta_7351 putative protease; putative protease complement(604353..604871) Rhodopseudomonas palustris DX-1 10062758 YP_004106938.1 CDS Rpdx1_0565 NC_014834.1 605002 607698 R TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; KEGG: bbt:BBta_7352 ATP-dependent helicase; SMART: helicase domain protein; DEAD-like helicase; ATP-dependent helicase HrpB complement(605002..607698) Rhodopseudomonas palustris DX-1 10062759 YP_004106939.1 CDS Rpdx1_0566 NC_014834.1 607772 608824 D PFAM: acyltransferase 3; KEGG: bbt:BBta_7354 hypothetical protein; acyltransferase 3 607772..608824 Rhodopseudomonas palustris DX-1 10062760 YP_004106940.1 CDS Rpdx1_0568 NC_014834.1 609266 611254 D PFAM: TRAG family protein; KEGG: mes:Meso_0515 conjugal transfer coupling protein TraG; TRAG family protein 609266..611254 Rhodopseudomonas palustris DX-1 10062762 YP_004106941.1 CDS Rpdx1_0569 NC_014834.1 611261 611686 D KEGG: mes:Meso_0514 helix-turn-helix protein, CopG; helix-turn-helix domain-containing protein 611261..611686 Rhodopseudomonas palustris DX-1 10062763 YP_004106942.1 CDS Rpdx1_0570 NC_014834.1 611820 613148 D PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3355 hypothetical protein; major facilitator superfamily protein 611820..613148 Rhodopseudomonas palustris DX-1 10062764 YP_004106943.1 CDS Rpdx1_0571 NC_014834.1 613317 614291 D manually curated; TIGRFAM: P-type conjugative transfer ATPase TrbB; KEGG: bbt:BBta_7741 conjugal transfer protein TrbB; PFAM: type II secretion system protein E; P-type conjugative transfer ATPase TrbB 613317..614291 Rhodopseudomonas palustris DX-1 10062765 YP_004106944.1 CDS Rpdx1_0572 NC_014834.1 614293 614616 D PFAM: Conjugal transfer protein TrbC; KEGG: pzu:PHZ_c1513 conjugal transfer protein; conjugal transfer protein TrbC 614293..614616 Rhodopseudomonas palustris DX-1 10062766 YP_004106945.1 CDS Rpdx1_0573 NC_014834.1 614616 614879 D KEGG: bbt:BBta_1502 conjugal transfer protein TrbD; conjugal transfer protein TrbD 614616..614879 Rhodopseudomonas palustris DX-1 10062767 YP_004106946.1 CDS Rpdx1_0574 NC_014834.1 614890 617331 D KEGG: bbt:BBta_1503 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase; type IV transporter subunit CagE/TrbE/VirB 614890..617331 Rhodopseudomonas palustris DX-1 10062768 YP_004106947.1 CDS Rpdx1_0575 NC_014834.1 617328 618056 D TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: bbt:BBta_3368 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ 617328..618056 Rhodopseudomonas palustris DX-1 10062769 YP_004106948.1 CDS Rpdx1_0576 NC_014834.1 618424 619647 D KEGG: bbt:BBta_1505 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL 618424..619647 Rhodopseudomonas palustris DX-1 10062770 YP_004106949.1 CDS Rpdx1_0577 NC_014834.1 619748 620431 D KEGG: bja:blr1618 conjugal transfer protein TrbF; conjugal transfer protein TrbF 619748..620431 Rhodopseudomonas palustris DX-1 10062771 YP_004106950.1 CDS Rpdx1_0578 NC_014834.1 620428 621462 D KEGG: bja:blr1619 conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 620428..621462 Rhodopseudomonas palustris DX-1 10062772 YP_004106951.1 CDS Rpdx1_0579 NC_014834.1 621459 622670 D PFAM: conjugation TrbI family protein; KEGG: bja:blr1620 conjugal transfer protein; conjugation TrbI family protein 621459..622670 Rhodopseudomonas palustris DX-1 10062773 YP_004106952.1 CDS Rpdx1_0580 NC_014834.1 622679 622918 D PFAM: Protein of unknown function DUF2274; KEGG: bja:bsr1621 hypothetical protein; hypothetical protein 622679..622918 Rhodopseudomonas palustris DX-1 10062774 YP_004106953.1 CDS Rpdx1_0581 NC_014834.1 622891 623847 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_1510 LysR family transcriptional regulator; LysR family transcriptional regulator complement(622891..623847) Rhodopseudomonas palustris DX-1 10062775 YP_004106954.1 CDS Rpdx1_0582 NC_014834.1 623907 624536 R KEGG: mlo:mlr6385 conjugation factor synthase TraI; PFAM: autoinducer synthesis protein; acyl-homoserine-lactone synthase complement(623907..624536) Rhodopseudomonas palustris DX-1 10062776 YP_004106955.1 CDS Rpdx1_0583 NC_014834.1 624618 625346 R manually curated; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; KEGG: mlo:mlr6102 transcriptional regulator; SMART: regulatory protein LuxR; autoinducer-binding domain-containing protein complement(624618..625346) Rhodopseudomonas palustris DX-1 10062777 YP_004106956.1 CDS Rpdx1_0584 NC_014834.1 625677 627269 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: cti:RALTA_B1332 FAD flavoprotein oxidoreductase; glucose-methanol-choline oxidoreductase complement(625677..627269) Rhodopseudomonas palustris DX-1 10062778 YP_004106957.1 CDS Rpdx1_0585 NC_014834.1 627441 627581 D hypothetical protein 627441..627581 Rhodopseudomonas palustris DX-1 10062779 YP_004106958.1 CDS Rpdx1_0586 NC_014834.1 627578 628825 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A1310 alpha-methylacyl-CoA racemase; L-carnitine dehydratase/bile acid-inducible protein F complement(627578..628825) Rhodopseudomonas palustris DX-1 10062780 YP_004106959.1 CDS Rpdx1_0588 NC_014834.1 630140 631501 D PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_1879 extracellular solute-binding protein; family 1 extracellular solute-binding protein 630140..631501 Rhodopseudomonas palustris DX-1 10062782 YP_004106960.1 CDS Rpdx1_0589 NC_014834.1 631534 632406 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_1880 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 631534..632406 Rhodopseudomonas palustris DX-1 10062783 YP_004106961.1 CDS Rpdx1_0590 NC_014834.1 632403 633389 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_1881 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 632403..633389 Rhodopseudomonas palustris DX-1 10062784 YP_004106962.1 CDS Rpdx1_0591 NC_014834.1 633477 634205 R KEGG: oca:OCAR_5301 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(633477..634205) Rhodopseudomonas palustris DX-1 10062785 YP_004106963.1 CDS Rpdx1_0592 NC_014834.1 634408 635793 D KEGG: nha:Nham_1482 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; glutathione-disulfide reductase 634408..635793 Rhodopseudomonas palustris DX-1 10062786 YP_004106964.1 CDS Rpdx1_0593 NC_014834.1 636009 637565 D PFAM: AMP-dependent synthetase and ligase; KEGG: bgl:bglu_1g29230 AMP-binding domain protein; AMP-dependent synthetase and ligase 636009..637565 Rhodopseudomonas palustris DX-1 10062787 YP_004106965.1 CDS Rpdx1_0594 NC_014834.1 637591 639045 D PFAM: Aldehyde Dehydrogenase; KEGG: oca:OCAR_7071 succinate-semialdehyde dehydrogenase [NADP+] (ssdh); aldehyde dehydrogenase 637591..639045 Rhodopseudomonas palustris DX-1 10062788 YP_004106966.1 CDS Rpdx1_0595 NC_014834.1 639173 640042 D KEGG: pla:Plav_1965 hypothetical protein; hypothetical protein 639173..640042 Rhodopseudomonas palustris DX-1 10062789 YP_004106967.1 CDS Rpdx1_0596 NC_014834.1 640130 641566 D PFAM: FAD linked oxidase domain protein; KEGG: ret:RHE_CH00808 glycolate oxidase subunit D protein; FAD linked oxidase domain-containing protein 640130..641566 Rhodopseudomonas palustris DX-1 10062790 YP_004106968.1 CDS Rpdx1_0597 NC_014834.1 641582 642772 D PFAM: FAD linked oxidase domain protein; KEGG: mno:Mnod_0677 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 641582..642772 Rhodopseudomonas palustris DX-1 10062791 YP_004106969.1 CDS Rpdx1_0598 NC_014834.1 642789 644096 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mno:Mnod_0680 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein 642789..644096 Rhodopseudomonas palustris DX-1 10062792 YP_004106970.1 CDS Rpdx1_0599 NC_014834.1 644124 645164 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: rme:Rmet_4580 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(644124..645164) Rhodopseudomonas palustris DX-1 10062793 YP_004106971.1 CDS Rpdx1_0600 NC_014834.1 645161 646159 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: reh:H16_B0717 ABC transporter ATPase; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(645161..646159) Rhodopseudomonas palustris DX-1 10062794 YP_004106972.1 CDS Rpdx1_0601 NC_014834.1 646163 647860 R PFAM: extracellular solute-binding protein family 5; KEGG: rme:Rmet_4578 extracellular solute-binding protein; family 5 extracellular solute-binding protein complement(646163..647860) Rhodopseudomonas palustris DX-1 10062795 YP_004106973.1 CDS Rpdx1_0602 NC_014834.1 647894 648796 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B0719 ABC transporter permease; binding-protein-dependent transporter inner membrane component complement(647894..648796) Rhodopseudomonas palustris DX-1 10062796 YP_004106974.1 CDS Rpdx1_0603 NC_014834.1 648800 649756 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B0720 ABC transporter permease; binding-protein-dependent transporter inner membrane component complement(648800..649756) Rhodopseudomonas palustris DX-1 10062797 YP_004106975.1 CDS Rpdx1_0604 NC_014834.1 650128 651780 D PFAM: FAD linked oxidase domain protein; KEGG: pol:Bpro_5107 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 650128..651780 Rhodopseudomonas palustris DX-1 10062798 YP_004106976.1 CDS Rpdx1_0605 NC_014834.1 651793 652473 D PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_2266 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein 651793..652473 Rhodopseudomonas palustris DX-1 10062799 YP_004106977.1 CDS Rpdx1_0606 NC_014834.1 652509 652850 D KEGG: bbr:BB0279 ferredoxin; manually curated; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Rieske (2Fe-2S) iron-sulfur domain 652509..652850 Rhodopseudomonas palustris DX-1 10062800 YP_004106978.1 CDS Rpdx1_0607 NC_014834.1 652954 654369 D PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; Rieske [2Fe-2S] iron-sulphur domain; KEGG: nar:Saro_1680 ring hydroxylating dioxygenase, alpha subunit; aromatic-ring-hydroxylating dioxygenase subunit alpha-like protein 652954..654369 Rhodopseudomonas palustris DX-1 10062801 YP_004106979.1 CDS Rpdx1_0608 NC_014834.1 654379 654879 D PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: nar:Saro_1681 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 654379..654879 Rhodopseudomonas palustris DX-1 10062802 YP_004106980.1 CDS Rpdx1_0609 NC_014834.1 655026 656207 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mlo:mll9218 putative ferredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 655026..656207 Rhodopseudomonas palustris DX-1 10062803 YP_004106981.1 CDS Rpdx1_0610 NC_014834.1 656666 657142 R manually curated; KEGG: dol:Dole_2089 hypothetical protein; hypothetical protein complement(656666..657142) Rhodopseudomonas palustris DX-1 10062804 YP_004106982.1 CDS Rpdx1_0611 NC_014834.1 657143 658342 R KEGG: dol:Dole_2090 hypothetical protein; hypothetical protein complement(657143..658342) Rhodopseudomonas palustris DX-1 10062805 YP_004106983.1 CDS Rpdx1_0612 NC_014834.1 658339 659355 R KEGG: cyc:PCC7424_5594 patatin; manually curated; PFAM: Patatin; patatin complement(658339..659355) Rhodopseudomonas palustris DX-1 10062806 YP_004106984.1 CDS Rpdx1_0613 NC_014834.1 659361 659585 R KEGG: cak:Caul_1158 hypothetical protein; hypothetical protein complement(659361..659585) Rhodopseudomonas palustris DX-1 10062807 YP_004106985.1 CDS Rpdx1_0614 NC_014834.1 659720 660034 D manually curated; PFAM: helix-turn-helix domain protein; KEGG: bac:BamMC406_6747 XRE family transcriptional regulator; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 659720..660034 Rhodopseudomonas palustris DX-1 10062808 YP_004106986.1 CDS Rpdx1_0615 NC_014834.1 660045 660926 D PFAM: protein of unknown function DUF955; KEGG: xau:Xaut_0551 hypothetical protein; hypothetical protein 660045..660926 Rhodopseudomonas palustris DX-1 10062809 YP_004106987.1 CDS Rpdx1_0616 NC_014834.1 661372 662742 R PFAM: integrase family protein; KEGG: mlo:mll6432 symbiosis island integrase; integrase family protein complement(661372..662742) Rhodopseudomonas palustris DX-1 10062810 YP_004106988.1 CDS Rpdx1_0617 NC_014834.1 663206 663751 D KEGG: nha:Nham_3497 disulphide bond formation protein DsbB; disulfide bond formation protein DsbB 663206..663751 Rhodopseudomonas palustris DX-1 10062812 YP_004106989.1 CDS Rpdx1_0618 NC_014834.1 663917 665122 D KEGG: bja:bll6988 hypothetical protein; PFAM: histidine kinase dimerisation/phosphoacceptor; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein; signal transduction histidine kinase 663917..665122 Rhodopseudomonas palustris DX-1 10062813 YP_004106990.1 CDS Rpdx1_0619 NC_014834.1 665196 665573 D KEGG: mlo:mll9592 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 665196..665573 Rhodopseudomonas palustris DX-1 10062814 YP_004106991.1 CDS Rpdx1_0620 NC_014834.1 665679 666392 D PFAM: PRC-barrel domain protein; KEGG: mlo:mlr9581 hypothetical protein; PRC-barrel domain-containing protein 665679..666392 Rhodopseudomonas palustris DX-1 10062815 YP_004106992.1 CDS Rpdx1_0621 NC_014834.1 666435 667514 R KEGG: bja:bll1341 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; hypothetical protein complement(666435..667514) Rhodopseudomonas palustris DX-1 10062816 YP_004106993.1 CDS Rpdx1_0622 NC_014834.1 667683 668264 D KEGG: bra:BRADO6543 putative signal peptide; hypothetical protein 667683..668264 Rhodopseudomonas palustris DX-1 10062817 YP_004106994.1 CDS Rpdx1_0623 NC_014834.1 668412 668795 D PFAM: LrgA family protein; KEGG: bja:blr1347 hypothetical protein; LrgA family protein 668412..668795 Rhodopseudomonas palustris DX-1 10062818 YP_004106995.1 CDS Rpdx1_0624 NC_014834.1 668792 669514 D PFAM: LrgB family protein; KEGG: bja:blr1348 hypothetical protein; LrgB family protein 668792..669514 Rhodopseudomonas palustris DX-1 10062819 YP_004106996.1 CDS Rpdx1_0625 NC_014834.1 669607 670071 D KEGG: mrd:Mrad2831_1254 hypothetical protein; hypothetical protein 669607..670071 Rhodopseudomonas palustris DX-1 10062820 YP_004106997.1 CDS Rpdx1_0626 NC_014834.1 670075 671151 R KEGG: bja:bll1350 hypothetical protein; hypothetical protein complement(670075..671151) Rhodopseudomonas palustris DX-1 10062821 YP_004106998.1 CDS Rpdx1_0627 NC_014834.1 671330 672475 D PFAM: protein of unknown function UPF0118; KEGG: bbt:BBta_2998 hypothetical protein; hypothetical protein 671330..672475 Rhodopseudomonas palustris DX-1 10062822 YP_004106999.1 CDS Rpdx1_0628 NC_014834.1 672472 673134 R TIGRFAM: anti-sigma factor, , ChrR family; KEGG: avi:Avi_0090 anti sigma factor protein; anti-ECFsigma factor ChrR complement(672472..673134) Rhodopseudomonas palustris DX-1 10062823 YP_004107000.1 CDS Rpdx1_0629 NC_014834.1 673131 673718 R KEGG: rru:Rru_A0722 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(673131..673718) Rhodopseudomonas palustris DX-1 10062824 YP_004107001.1 CDS Rpdx1_0630 NC_014834.1 674108 674209 D hypothetical protein 674108..674209 Rhodopseudomonas palustris DX-1 10062825 YP_004107002.1 CDS Rpdx1_0631 NC_014834.1 674314 674922 R PFAM: Methyltransferase type 12; KEGG: mno:Mnod_2730 methyltransferase type 12; type 12 methyltransferase complement(674314..674922) Rhodopseudomonas palustris DX-1 10062826 YP_004107003.1 CDS Rpdx1_0632 NC_014834.1 674922 675803 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mrd:Mrad2831_3013 LysR family transcriptional regulator; LysR family transcriptional regulator complement(674922..675803) Rhodopseudomonas palustris DX-1 10062827 YP_004107004.1 CDS Rpdx1_0633 NC_014834.1 675909 677216 D PFAM: sodium:dicarboxylate symporter; KEGG: mrd:Mrad2831_3012 C4-dicarboxylate transporter DctA; sodium:dicarboxylate symporter 675909..677216 Rhodopseudomonas palustris DX-1 10062828 YP_004107005.1 CDS Rpdx1_0634 NC_014834.1 677257 678096 D KEGG: mrd:Mrad2831_3011 hypothetical protein; TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; allantoin catabolism protein 677257..678096 Rhodopseudomonas palustris DX-1 10062829 YP_004107006.1 CDS Rpdx1_0635 NC_014834.1 678093 678605 D KEGG: mrd:Mrad2831_3010 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase; ureidoglycolate hydrolase 678093..678605 Rhodopseudomonas palustris DX-1 10062830 YP_004107007.1 CDS Rpdx1_0636 NC_014834.1 678649 679269 R PFAM: Methyltransferase type 11; KEGG: dac:Daci_2653 methyltransferase type 11; type 11 methyltransferase complement(678649..679269) Rhodopseudomonas palustris DX-1 10062831 YP_004107008.1 CDS Rpdx1_0637 NC_014834.1 679387 679944 R KEGG: bja:bll1367 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease complement(679387..679944) Rhodopseudomonas palustris DX-1 10062832 YP_004107009.1 CDS Rpdx1_0638 NC_014834.1 680225 681223 D KEGG: bja:bll4682 cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; cysteine synthase A 680225..681223 Rhodopseudomonas palustris DX-1 10062833 YP_004107010.1 CDS Rpdx1_0639 NC_014834.1 681294 682211 R TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: bja:bll0812 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(681294..682211) Rhodopseudomonas palustris DX-1 10062834 YP_004107011.1 CDS Rpdx1_0640 NC_014834.1 682282 683199 R PFAM: Pirin domain protein; KEGG: bja:bll0813 hypothetical protein; Pirin domain-containing protein complement(682282..683199) Rhodopseudomonas palustris DX-1 10062835 YP_004107012.1 CDS Rpdx1_0641 NC_014834.1 683351 684769 R KEGG: oca:OCAR_4530 malonyl-CoA decarboxylase; PFAM: Malonyl-CoA decarboxylase; malonyl-CoA decarboxylase complement(683351..684769) Rhodopseudomonas palustris DX-1 10062836 YP_004107013.1 CDS Rpdx1_0642 NC_014834.1 684975 685580 R PFAM: PAS fold-4 domain protein; KEGG: sma:SAV_698 magnesium or manganese-dependent protein phosphatase; PAS fold-4 domain-containing protein complement(684975..685580) Rhodopseudomonas palustris DX-1 10062837 YP_004107014.1 CDS Rpdx1_0643 NC_014834.1 685660 687024 R PFAM: MmgE/PrpD family protein; KEGG: bja:bll0816 hypothetical protein; MmgE/PrpD family protein complement(685660..687024) Rhodopseudomonas palustris DX-1 10062838 YP_004107015.1 CDS Rpdx1_0644 NC_014834.1 687195 688307 D KEGG: bbt:BBta_0015 hypothetical protein; hypothetical protein 687195..688307 Rhodopseudomonas palustris DX-1 10062839 YP_004107016.1 CDS Rpdx1_0645 NC_014834.1 688315 688776 R KEGG: alv:Alvin_1734 protein of unknown function DUF2269, transmembrane; hypothetical protein complement(688315..688776) Rhodopseudomonas palustris DX-1 10062840 YP_004107017.1 CDS Rpdx1_0646 NC_014834.1 689023 690180 D TIGRFAM: esterase, PHB depolymerase family; KEGG: bja:blr0899 poly(3-hydroxyalkanoate) depolymerase; esterase, PHB depolymerase family 689023..690180 Rhodopseudomonas palustris DX-1 10062841 YP_004107018.1 CDS Rpdx1_0647 NC_014834.1 690300 690719 D PFAM: protein of unknown function DUF1236; KEGG: nha:Nham_0234 hypothetical protein; hypothetical protein 690300..690719 Rhodopseudomonas palustris DX-1 10062842 YP_004107019.1 CDS Rpdx1_0648 NC_014834.1 690792 691769 R KEGG: bja:blr7666 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(690792..691769) Rhodopseudomonas palustris DX-1 10062843 YP_004107020.1 CDS Rpdx1_0649 NC_014834.1 692004 692672 R KEGG: bbt:BBta_7673 metallo-hydrolase/oxidoreductase domain-containing protein; metallo-hydrolase/oxidoreductase domain-containing protein complement(692004..692672) Rhodopseudomonas palustris DX-1 10062844 YP_004107021.1 CDS Rpdx1_0650 NC_014834.1 692741 693859 R SMART: von Willebrand factor type A; KEGG: hch:HCH_00942 von Willebrand factor type A domain-containing protein; von Willebrand factor type A complement(692741..693859) Rhodopseudomonas palustris DX-1 10062845 YP_004107022.1 CDS Rpdx1_0651 NC_014834.1 694011 694490 D KEGG: nha:Nham_0232 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1052; hypothetical protein 694011..694490 Rhodopseudomonas palustris DX-1 10062846 YP_004107023.1 CDS Rpdx1_0652 NC_014834.1 694628 695182 R KEGG: bja:bll0904 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(694628..695182) Rhodopseudomonas palustris DX-1 10062847 YP_004107024.1 CDS Rpdx1_0653 NC_014834.1 695274 696596 R KEGG: nwi:Nwi_0110 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(695274..696596) Rhodopseudomonas palustris DX-1 10062848 YP_004107025.1 CDS Rpdx1_0654 NC_014834.1 696870 697667 D KEGG: bja:blr0906 nodulation ATP-binding protein I; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 696870..697667 Rhodopseudomonas palustris DX-1 10062849 YP_004107026.1 CDS Rpdx1_0655 NC_014834.1 697664 698494 D PFAM: ABC-2 type transporter; KEGG: bja:blr0907 hypothetical protein; ABC-2 type transporter 697664..698494 Rhodopseudomonas palustris DX-1 10062850 YP_004107027.1 CDS Rpdx1_0656 NC_014834.1 698633 699961 D KEGG: bja:blr0908 hypothetical protein; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; polyhydroxyalkanoate depolymerase 698633..699961 Rhodopseudomonas palustris DX-1 10062851 YP_004107028.1 CDS Rpdx1_0657 NC_014834.1 700218 701051 D KEGG: bja:blr0909 hypothetical protein; manually curated; PFAM: protein of unknown function DUF45; hypothetical protein 700218..701051 Rhodopseudomonas palustris DX-1 10062852 YP_004107029.1 CDS Rpdx1_0658 NC_014834.1 701323 703572 R KEGG: nha:Nham_0227 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein complement(701323..703572) Rhodopseudomonas palustris DX-1 10062853 YP_004107030.1 CDS Rpdx1_0659 NC_014834.1 703756 704007 D KEGG: bra:BRADO5555 hypothetical protein; hypothetical protein 703756..704007 Rhodopseudomonas palustris DX-1 10062854 YP_004107031.1 CDS Rpdx1_0660 NC_014834.1 704042 704254 R KEGG: afu:AF2218 hypothetical protein; hypothetical protein complement(704042..704254) Rhodopseudomonas palustris DX-1 10062855 YP_004107032.1 CDS Rpdx1_0661 NC_014834.1 704439 705659 R PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_7651 putative branched-chain amino acid ABC transporter, periplasmic binding protein; extracellular ligand-binding receptor complement(704439..705659) Rhodopseudomonas palustris DX-1 10062856 YP_004107033.1 CDS Rpdx1_0662 NC_014834.1 705794 706156 R PFAM: protein of unknown function DUF1304; KEGG: bbt:BBta_7649 hypothetical protein; hypothetical protein complement(705794..706156) Rhodopseudomonas palustris DX-1 10062857 YP_004107034.1 CDS Rpdx1_0663 NC_014834.1 706237 706665 D KEGG: bja:blr0911 hypothetical protein; hypothetical protein 706237..706665 Rhodopseudomonas palustris DX-1 10062858 YP_004107035.1 CDS Rpdx1_0664 NC_014834.1 706761 709496 D KEGG: bra:BRADO3478 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; multi-sensor hybrid histidine kinase 706761..709496 Rhodopseudomonas palustris DX-1 10062859 YP_004107036.1 CDS Rpdx1_0665 NC_014834.1 709687 712023 D KEGG: bra:BRADO0672 transcriptional accessory protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Tex-like protein 709687..712023 Rhodopseudomonas palustris DX-1 10062860 YP_004107037.1 CDS Rpdx1_0667 NC_014834.1 713713 714936 R KEGG: nha:Nham_1938 chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; chromate transporter complement(713713..714936) Rhodopseudomonas palustris DX-1 10062862 YP_004107038.1 CDS Rpdx1_0668 NC_014834.1 714933 715826 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: alv:Alvin_1021 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(714933..715826) Rhodopseudomonas palustris DX-1 10062863 YP_004107039.1 CDS Rpdx1_0669 NC_014834.1 715971 716660 R PFAM: regulatory protein TetR; KEGG: ctt:CtCNB1_4790 transcriptional regulator, TetR family; regulatory protein TetR complement(715971..716660) Rhodopseudomonas palustris DX-1 10062864 YP_004107040.1 CDS Rpdx1_0670 NC_014834.1 716756 718423 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rfr:Rfer_0523 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 716756..718423 Rhodopseudomonas palustris DX-1 10062865 YP_004107041.1 CDS Rpdx1_0671 NC_014834.1 718505 719839 R TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: afr:AFE_0524 carboxy-terminal peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease complement(718505..719839) Rhodopseudomonas palustris DX-1 10062866 YP_004107042.1 CDS Rpdx1_0672 NC_014834.1 719995 722796 R SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: bja:bll0916 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein; UTP-GlnB uridylyltransferase, GlnD complement(719995..722796) Rhodopseudomonas palustris DX-1 10062867 YP_004107043.1 CDS Rpdx1_0673 NC_014834.1 723020 724261 D TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: bbt:BBta_7590 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 723020..724261 Rhodopseudomonas palustris DX-1 10062868 YP_004107044.1 CDS Rpdx1_0674 NC_014834.1 724461 724862 D PFAM: NUDIX hydrolase; KEGG: bbt:BBta_7592 putative mutator protein MutT; NUDIX hydrolase 724461..724862 Rhodopseudomonas palustris DX-1 10062869 YP_004107045.1 CDS Rpdx1_0675 NC_014834.1 725072 725896 R PFAM: Methyltransferase type 11; KEGG: bja:bll0208 methyltransferase; type 11 methyltransferase complement(725072..725896) Rhodopseudomonas palustris DX-1 10062870 YP_004107046.1 CDS Rpdx1_0676 NC_014834.1 725922 726224 R KEGG: bbt:BBta_7253 hypothetical protein; hypothetical protein complement(725922..726224) Rhodopseudomonas palustris DX-1 10062871 YP_004107047.1 CDS Rpdx1_0677 NC_014834.1 726327 727142 D PFAM: phosphoribosyltransferase; KEGG: nha:Nham_0480 phosphoribosyltransferase; phosphoribosyltransferase 726327..727142 Rhodopseudomonas palustris DX-1 10062872 YP_004107048.1 CDS Rpdx1_0678 NC_014834.1 727184 727459 D KEGG: bra:BRADO0582 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 3 727184..727459 Rhodopseudomonas palustris DX-1 10062873 YP_004107049.1 CDS Rpdx1_0679 NC_014834.1 727456 728331 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bbt:BBta_7596 putative nitrilase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 727456..728331 Rhodopseudomonas palustris DX-1 10062874 YP_004107050.1 CDS Rpdx1_0680 NC_014834.1 728328 728822 D PFAM: protein of unknown function DUF1178; KEGG: bja:blr0212 hypothetical protein; hypothetical protein 728328..728822 Rhodopseudomonas palustris DX-1 10062875 YP_004107051.1 CDS Rpdx1_0681 NC_014834.1 728953 729483 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_0476 hypothetical protein; hypothetical protein 728953..729483 Rhodopseudomonas palustris DX-1 10062876 YP_004107052.1 CDS Rpdx1_0682 NC_014834.1 729484 730383 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_0475 hypothetical protein; hypothetical protein complement(729484..730383) Rhodopseudomonas palustris DX-1 10062877 YP_004107053.1 CDS Rpdx1_0683 NC_014834.1 730543 731367 D KEGG: bra:BRADO0882 putative metal-dependent hydrolase; putative metal-dependent hydrolase 730543..731367 Rhodopseudomonas palustris DX-1 10062878 YP_004107054.1 CDS Rpdx1_0684 NC_014834.1 731472 732233 R TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: bra:BRADO0576 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11; ubiquinone biosynthesis O-methyltransferase complement(731472..732233) Rhodopseudomonas palustris DX-1 10062879 YP_004107055.1 CDS Rpdx1_0685 NC_014834.1 732442 733695 D KEGG: bra:BRADO0574 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 732442..733695 Rhodopseudomonas palustris DX-1 10062880 YP_004107056.1 CDS Rpdx1_0686 NC_014834.1 734026 736293 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; GAF domain protein; PEP-utilising protein mobile region; KEGG: bja:blr0217 phosphoenolpyruvate-protein phosphotransferase; SMART: GAF domain protein; protein PtsP 734026..736293 Rhodopseudomonas palustris DX-1 10062881 YP_004107057.1 CDS Rpdx1_0687 NC_014834.1 736348 737433 D KEGG: bbt:BBta_7604 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 1 736348..737433 Rhodopseudomonas palustris DX-1 10062882 YP_004107058.1 CDS Rpdx1_0688 NC_014834.1 737430 738299 D manually curated; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; KEGG: nha:Nham_0469 HemK family modification methylase; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase 737430..738299 Rhodopseudomonas palustris DX-1 10062883 YP_004107059.1 CDS Rpdx1_0689 NC_014834.1 738751 739455 D KEGG: nha:Nham_0468 hypothetical protein; hypothetical protein 738751..739455 Rhodopseudomonas palustris DX-1 10062884 YP_004107060.1 CDS Rpdx1_0690 NC_014834.1 739605 740384 R PFAM: Methyltransferase type 11; KEGG: oca:OCAR_4101 methyltransferase type 11; type 11 methyltransferase complement(739605..740384) Rhodopseudomonas palustris DX-1 10062885 YP_004107061.1 CDS Rpdx1_0691 NC_014834.1 740549 741316 D TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: nha:Nham_0466 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 740549..741316 Rhodopseudomonas palustris DX-1 10062886 YP_004107062.1 CDS Rpdx1_0692 NC_014834.1 741313 741744 D PFAM: protein of unknown function DUF985; KEGG: xau:Xaut_2020 hypothetical protein; hypothetical protein 741313..741744 Rhodopseudomonas palustris DX-1 10062887 YP_004107063.1 CDS Rpdx1_0693 NC_014834.1 741919 742857 R PFAM: PfkB domain protein; KEGG: nha:Nham_0460 PfkB; PfkB domain-containing protein complement(741919..742857) Rhodopseudomonas palustris DX-1 10062888 YP_004107064.1 CDS Rpdx1_0694 NC_014834.1 742854 743786 R KEGG: bja:blr8123 MutT/NUDIX family protein; PFAM: NUDIX hydrolase; Zinc ribbon NADH pyrophosphatase; NADH pyrophosphatase-like; NAD(+) diphosphatase complement(742854..743786) Rhodopseudomonas palustris DX-1 10062889 YP_004107065.1 CDS Rpdx1_0695 NC_014834.1 743791 744210 R PFAM: histidine triad (HIT) protein; KEGG: bbt:BBta_7347 hypothetical protein; histidine triad (HIT) protein complement(743791..744210) Rhodopseudomonas palustris DX-1 10062890 YP_004107066.1 CDS Rpdx1_0696 NC_014834.1 744680 746554 D TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: bja:bll8116 DNA polymerase III subunits gamma and tau; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 744680..746554 Rhodopseudomonas palustris DX-1 10062892 YP_004107067.1 CDS Rpdx1_0697 NC_014834.1 746576 746896 D PFAM: conserved hypothetical protein; KEGG: nha:Nham_0463 hypothetical protein; hypothetical protein 746576..746896 Rhodopseudomonas palustris DX-1 10062893 YP_004107068.1 CDS Rpdx1_0698 NC_014834.1 747002 747607 D TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain protein; KEGG: oca:OCAR_7543 recombination protein RecR; SMART: Toprim sub domain protein; recombination protein RecR 747002..747607 Rhodopseudomonas palustris DX-1 10062894 YP_004107069.1 CDS Rpdx1_0699 NC_014834.1 747627 748058 D KEGG: bja:bll8113 hypothetical protein; hypothetical protein 747627..748058 Rhodopseudomonas palustris DX-1 10062895 YP_004107070.1 CDS Rpdx1_0700 NC_014834.1 748096 749475 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr8112 hypothetical protein; major facilitator superfamily protein complement(748096..749475) Rhodopseudomonas palustris DX-1 10062896 YP_004107071.1 CDS Rpdx1_0701 NC_014834.1 749546 750745 R PFAM: protein of unknown function DUF195; KEGG: bja:blr8110 hypothetical protein; hypothetical protein complement(749546..750745) Rhodopseudomonas palustris DX-1 10062897 YP_004107072.1 CDS Rpdx1_0702 NC_014834.1 750895 751422 D TIGRFAM: peptide deformylase; KEGG: bja:bll8109 peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 750895..751422 Rhodopseudomonas palustris DX-1 10062898 YP_004107073.1 CDS Rpdx1_0703 NC_014834.1 751503 752438 D KEGG: nha:Nham_3694 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase 751503..752438 Rhodopseudomonas palustris DX-1 10062899 YP_004107074.1 CDS Rpdx1_0704 NC_014834.1 752551 753288 D TIGRFAM: tRNA pseudouridine synthase A; KEGG: bra:BRADO0772 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 752551..753288 Rhodopseudomonas palustris DX-1 10062900 YP_004107075.1 CDS Rpdx1_0705 NC_014834.1 753427 754584 R KEGG: nwi:Nwi_3068 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; succinyl-diaminopimelate desuccinylase complement(753427..754584) Rhodopseudomonas palustris DX-1 10062901 YP_004107076.1 CDS Rpdx1_0706 NC_014834.1 754592 755437 R TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: nha:Nham_3698 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase complement(754592..755437) Rhodopseudomonas palustris DX-1 10062902 YP_004107077.1 CDS Rpdx1_0707 NC_014834.1 755779 756480 R KEGG: nha:Nham_3699 pyrimidine 5-nucleotidase; TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; pyrimidine 5'-nucleotidase complement(755779..756480) Rhodopseudomonas palustris DX-1 10062903 YP_004107078.1 CDS Rpdx1_0708 NC_014834.1 756477 757496 R KEGG: bja:blr8102 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1036; Peptidoglycan-binding domain 1 protein; hypothetical protein complement(756477..757496) Rhodopseudomonas palustris DX-1 10062904 YP_004107079.1 CDS Rpdx1_0709 NC_014834.1 757583 758479 R TIGRFAM: acetylglutamate kinase; KEGG: bra:BRADO0779 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase complement(757583..758479) Rhodopseudomonas palustris DX-1 10062905 YP_004107080.1 CDS Rpdx1_0710 NC_014834.1 758593 758967 R PFAM: protein of unknown function DUF423; KEGG: bbt:BBta_7328 hypothetical protein; hypothetical protein complement(758593..758967) Rhodopseudomonas palustris DX-1 10062906 YP_004107081.1 CDS Rpdx1_0711 NC_014834.1 758967 759617 R KEGG: bra:BRADO0781 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related; ribosome biogenesis GTP-binding protein YsxC complement(758967..759617) Rhodopseudomonas palustris DX-1 10062907 YP_004107082.1 CDS Rpdx1_0712 NC_014834.1 759778 761655 R KEGG: bja:blr8098 putative inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60 kDa inner membrane insertion protein; membrane protein insertase complement(759778..761655) Rhodopseudomonas palustris DX-1 10062908 YP_004107083.1 CDS Rpdx1_0713 NC_014834.1 761672 762013 R KEGG: nha:Nham_3704 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; ribonuclease P protein component complement(761672..762013) Rhodopseudomonas palustris DX-1 10062909 YP_004107084.1 CDS Rpdx1_0715 NC_014834.1 762514 763992 D KEGG: nha:Nham_3706 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 762514..763992 Rhodopseudomonas palustris DX-1 10062911 YP_004107085.1 CDS Rpdx1_0716 NC_014834.1 764948 766270 D PFAM: pentapeptide repeat protein; KEGG: tel:tll0709 hypothetical protein; pentapeptide repeat-containing protein 764948..766270 Rhodopseudomonas palustris DX-1 10062913 YP_004107086.1 CDS Rpdx1_0717 NC_014834.1 766425 766553 R hypothetical protein complement(766425..766553) Rhodopseudomonas palustris DX-1 10062914 YP_004107087.1 CDS Rpdx1_0718 NC_014834.1 766819 767403 D KEGG: cps:CPS_1517 flagellar biosynthesis regulator FlhF; hypothetical protein 766819..767403 Rhodopseudomonas palustris DX-1 10062915 YP_004107088.1 CDS Rpdx1_0720 NC_014834.1 768487 769203 R PFAM: glutamine amidotransferase class-I; KEGG: pde:Pden_1435 glutamine amidotransferase class-I; glutamine amidotransferase complement(768487..769203) Rhodopseudomonas palustris DX-1 10062917 YP_004107089.1 CDS Rpdx1_0721 NC_014834.1 769426 769965 D PFAM: protein of unknown function DUF1234; KEGG: rlg:Rleg_4455 protein of unknown function DUF1234; hypothetical protein 769426..769965 Rhodopseudomonas palustris DX-1 10062918 YP_004107090.1 CDS Rpdx1_0722 NC_014834.1 769967 770617 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: azc:AZC_2068 efflux protein; lysine exporter protein LysE/YggA 769967..770617 Rhodopseudomonas palustris DX-1 10062919 YP_004107091.1 CDS Rpdx1_0723 NC_014834.1 770635 772008 R KEGG: zmo:ZMO1944 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(770635..772008) Rhodopseudomonas palustris DX-1 10062920 YP_004107092.1 CDS Rpdx1_0724 NC_014834.1 772318 773229 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rsp:RSP_1915 LysR family transcriptional regulator; LysR family transcriptional regulator 772318..773229 Rhodopseudomonas palustris DX-1 10062921 YP_004107093.1 CDS Rpdx1_0725 NC_014834.1 773259 773753 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: rsh:Rsph17029_0568 cupin 2 domain-containing protein; cupin complement(773259..773753) Rhodopseudomonas palustris DX-1 10062922 YP_004107094.1 CDS Rpdx1_0726 NC_014834.1 773758 774048 R PFAM: protein of unknown function DUF1330; KEGG: rce:RC1_4047 hypothetical protein; hypothetical protein complement(773758..774048) Rhodopseudomonas palustris DX-1 10062923 YP_004107095.1 CDS Rpdx1_0727 NC_014834.1 774101 774493 R PFAM: protein of unknown function DUF1486; KEGG: pde:Pden_1443 hypothetical protein; hypothetical protein complement(774101..774493) Rhodopseudomonas palustris DX-1 10062924 YP_004107096.1 CDS Rpdx1_0728 NC_014834.1 774844 775314 D PFAM: thioesterase superfamily protein; KEGG: rce:RC1_4046 thioesterase family protein; thioesterase superfamily protein 774844..775314 Rhodopseudomonas palustris DX-1 10062925 YP_004107097.1 CDS Rpdx1_0729 NC_014834.1 775591 778575 D KEGG: acp:A2cp1_2977 glutamate synthase (NADPH), homotetrameric; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; glutamate synthase 775591..778575 Rhodopseudomonas palustris DX-1 10062926 YP_004107098.1 CDS Rpdx1_0730 NC_014834.1 778599 780632 R KEGG: bja:blr7973 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(778599..780632) Rhodopseudomonas palustris DX-1 10062927 YP_004107099.1 CDS Rpdx1_0731 NC_014834.1 780699 781313 R PFAM: regulatory protein TetR; KEGG: fre:Franean1_3028 TetR family transcriptional regulator; regulatory protein TetR complement(780699..781313) Rhodopseudomonas palustris DX-1 10062928 YP_004107100.1 CDS Rpdx1_0732 NC_014834.1 781460 782491 D PFAM: secretion protein HlyD family protein; KEGG: mpo:Mpop_0535 secretion protein HlyD family protein; secretion protein HlyD family protein 781460..782491 Rhodopseudomonas palustris DX-1 10062929 YP_004107101.1 CDS Rpdx1_0733 NC_014834.1 782488 785202 D KEGG: mpo:Mpop_0536 ABC transporter related; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; ABC transporter-like protein 782488..785202 Rhodopseudomonas palustris DX-1 10062930 YP_004107102.1 CDS Rpdx1_0734 NC_014834.1 785205 786332 D PFAM: ABC-2 type transporter; KEGG: sil:SPO0109 hypothetical protein; ABC-2 type transporter 785205..786332 Rhodopseudomonas palustris DX-1 10062931 YP_004107103.1 CDS Rpdx1_0735 NC_014834.1 786339 787628 R KEGG: bja:blr4505 hypothetical protein; hypothetical protein complement(786339..787628) Rhodopseudomonas palustris DX-1 10062932 YP_004107104.1 CDS Rpdx1_0736 NC_014834.1 787798 787983 R KEGG: bra:BRADO3583 hypothetical protein; hypothetical protein complement(787798..787983) Rhodopseudomonas palustris DX-1 10062933 YP_004107105.1 CDS Rpdx1_0737 NC_014834.1 788127 789005 D KEGG: bja:blr5288 transcriptional regulatory protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 788127..789005 Rhodopseudomonas palustris DX-1 10062934 YP_004107106.1 CDS Rpdx1_0738 NC_014834.1 789165 790139 D PFAM: conserved hypothetical protein; KEGG: bja:blr5289 hypothetical protein; hypothetical protein 789165..790139 Rhodopseudomonas palustris DX-1 10062935 YP_004107107.1 CDS Rpdx1_0739 NC_014834.1 790212 790859 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bja:blr1229 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(790212..790859) Rhodopseudomonas palustris DX-1 10062936 YP_004107108.1 CDS Rpdx1_0740 NC_014834.1 790840 791424 R KEGG: bbt:BBta_5841 putative ATP-binding component, PhnN protein; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN complement(790840..791424) Rhodopseudomonas palustris DX-1 10062937 YP_004107109.1 CDS Rpdx1_0741 NC_014834.1 791421 792599 R KEGG: bja:blr1227 phosphonate metabolism protein; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; phosphonate metabolism protein PhnM complement(791421..792599) Rhodopseudomonas palustris DX-1 10062938 YP_004107110.1 CDS Rpdx1_0742 NC_014834.1 792596 793306 R TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: bja:blr1226 phosphonate uptake transporter ATP-binding protein; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL complement(792596..793306) Rhodopseudomonas palustris DX-1 10062939 YP_004107111.1 CDS Rpdx1_0743 NC_014834.1 793306 794124 R TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bbt:BBta_5844 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK complement(793306..794124) Rhodopseudomonas palustris DX-1 10062940 YP_004107112.1 CDS Rpdx1_0744 NC_014834.1 794117 794995 R PFAM: phosphonate metabolism PhnJ; KEGG: bbt:BBta_5845 putative PhnJ protein, phosphonate metabolism; phosphonate metabolism PhnJ complement(794117..794995) Rhodopseudomonas palustris DX-1 10062941 YP_004107113.1 CDS Rpdx1_0745 NC_014834.1 794992 796089 R PFAM: phosphonate metabolism; KEGG: bja:blr1223 phosphonate metabolism protein; phosphonate metabolism protein complement(794992..796089) Rhodopseudomonas palustris DX-1 10062942 YP_004107114.1 CDS Rpdx1_0746 NC_014834.1 796093 796695 R KEGG: bja:blr1222 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; phosphonate C-P lyase system protein PhnH complement(796093..796695) Rhodopseudomonas palustris DX-1 10062943 YP_004107115.1 CDS Rpdx1_0747 NC_014834.1 796698 797267 R KEGG: bja:blr1221 phosphonate metabolism protein; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; phosphonate C-P lyase system protein PhnG complement(796698..797267) Rhodopseudomonas palustris DX-1 10062944 YP_004107116.1 CDS Rpdx1_0748 NC_014834.1 797283 798011 D TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: bbt:BBta_5849 GntR family transcriptional regulator; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 797283..798011 Rhodopseudomonas palustris DX-1 10062945 YP_004107117.1 CDS Rpdx1_0749 NC_014834.1 798109 798975 R KEGG: bra:BRADO5363 putative PhnE protein, phosphonate ABC transporter, putative membrane protein; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit complement(798109..798975) Rhodopseudomonas palustris DX-1 10062946 YP_004107118.1 CDS Rpdx1_0750 NC_014834.1 798972 799853 R KEGG: xau:Xaut_1320 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit complement(798972..799853) Rhodopseudomonas palustris DX-1 10062947 YP_004107119.1 CDS Rpdx1_0751 NC_014834.1 799922 800830 R TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: xau:Xaut_1321 phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein complement(799922..800830) Rhodopseudomonas palustris DX-1 10062948 YP_004107120.1 CDS Rpdx1_0752 NC_014834.1 800940 801752 R TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bja:bll7947 phosphonates transport system nucleotide binding/ATPase protein; SMART: AAA ATPase; phosphonate ABC transporter ATPase complement(800940..801752) Rhodopseudomonas palustris DX-1 10062949 YP_004107121.1 CDS Rpdx1_0753 NC_014834.1 801937 802617 D TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: bbt:BBta_5859 putative acetyltransferase; phosphonate metabolism protein 801937..802617 Rhodopseudomonas palustris DX-1 10062950 YP_004107122.1 CDS Rpdx1_0754 NC_014834.1 802614 803807 D KEGG: bja:blr7949 phosphonate metabolism protein; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; phosphonate metabolism protein PhnM 802614..803807 Rhodopseudomonas palustris DX-1 10062951 YP_004107123.1 CDS Rpdx1_0755 NC_014834.1 803830 804534 D KEGG: bja:blr7950 hypothetical protein; TIGRFAM: phosphonate metabolism protein; PFAM: protein of unknown function DUF1045; phosphonate metabolism protein 803830..804534 Rhodopseudomonas palustris DX-1 10062952 YP_004107124.1 CDS Rpdx1_0756 NC_014834.1 804545 805627 R KEGG: mpt:Mpe_A3544 hypothetical protein; hypothetical protein complement(804545..805627) Rhodopseudomonas palustris DX-1 10062953 YP_004107125.1 CDS Rpdx1_0757 NC_014834.1 805774 805968 D hypothetical protein 805774..805968 Rhodopseudomonas palustris DX-1 10062954 YP_004107126.1 CDS Rpdx1_0758 NC_014834.1 806027 806503 D PFAM: protein of unknown function DUF123; KEGG: rru:Rru_A0067 hypothetical protein; hypothetical protein 806027..806503 Rhodopseudomonas palustris DX-1 10062955 YP_004107127.1 CDS Rpdx1_0759 NC_014834.1 806481 806804 R PFAM: CutA1 divalent ion tolerance protein; KEGG: oca:OCAR_6913 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein complement(806481..806804) Rhodopseudomonas palustris DX-1 10062956 YP_004107128.1 CDS Rpdx1_0760 NC_014834.1 806904 807119 D KEGG: aba:Acid345_1009 hypothetical protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; FmdB family regulatory protein 806904..807119 Rhodopseudomonas palustris DX-1 10062957 YP_004107129.1 CDS Rpdx1_0761 NC_014834.1 807233 807736 D KEGG: ank:AnaeK_2200 hypothetical protein; hypothetical protein 807233..807736 Rhodopseudomonas palustris DX-1 10062958 YP_004107130.1 CDS Rpdx1_0762 NC_014834.1 807908 808396 D PFAM: PEBP family protein; KEGG: pph:Ppha_1458 PEBP family protein; PEBP family protein 807908..808396 Rhodopseudomonas palustris DX-1 10062959 YP_004107131.1 CDS Rpdx1_0763 NC_014834.1 808912 809613 R TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; KEGG: bbt:BBta_3155 cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase complement(808912..809613) Rhodopseudomonas palustris DX-1 10062960 YP_004107132.1 CDS Rpdx1_0764 NC_014834.1 809610 810665 R TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(809610..810665) Rhodopseudomonas palustris DX-1 10062961 YP_004107133.1 CDS Rpdx1_0765 NC_014834.1 811067 811498 D PFAM: protein of unknown function DUF1636; KEGG: mrd:Mrad2831_3113 hypothetical protein; hypothetical protein 811067..811498 Rhodopseudomonas palustris DX-1 10062962 YP_004107134.1 CDS Rpdx1_0766 NC_014834.1 811495 812025 D KEGG: mag:amb4425 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; adenosylcobinamide-phosphate guanylyltransferase 811495..812025 Rhodopseudomonas palustris DX-1 10062963 YP_004107135.1 CDS Rpdx1_0767 NC_014834.1 812029 813033 D KEGG: mno:Mnod_2148 cobalamin biosynthesis protein CobW; TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; cobalamin biosynthesis protein CobW 812029..813033 Rhodopseudomonas palustris DX-1 10062964 YP_004107136.1 CDS Rpdx1_0768 NC_014834.1 813166 816879 D TIGRFAM: cobaltochelatase, CobN subunit; KEGG: mag:amb4427 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase; cobaltochelatase subunit CobN 813166..816879 Rhodopseudomonas palustris DX-1 10062965 YP_004107137.1 CDS Rpdx1_0769 NC_014834.1 816876 817502 D TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: rlt:Rleg2_2130 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 816876..817502 Rhodopseudomonas palustris DX-1 10062966 YP_004107138.1 CDS Rpdx1_0770 NC_014834.1 817642 819126 D KEGG: rsq:Rsph17025_0384 cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyric acid synthase CobQ 817642..819126 Rhodopseudomonas palustris DX-1 10062967 YP_004107139.1 CDS Rpdx1_0771 NC_014834.1 819099 820070 R KEGG: sme:SMc04279 cobalamin biosynthesis protein; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CobD complement(819099..820070) Rhodopseudomonas palustris DX-1 10062968 YP_004107140.1 CDS Rpdx1_0772 NC_014834.1 820072 820884 R PFAM: periplasmic binding protein; KEGG: nha:Nham_3728 periplasmic binding protein; periplasmic-binding protein complement(820072..820884) Rhodopseudomonas palustris DX-1 10062969 YP_004107141.1 CDS Rpdx1_0773 NC_014834.1 820948 821940 D KEGG: rce:RC1_3874 threonine-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; L-threonine-O-3-phosphate decarboxylase 820948..821940 Rhodopseudomonas palustris DX-1 10062970 YP_004107142.1 CDS Rpdx1_0774 NC_014834.1 821952 822731 R KEGG: nwi:Nwi_3049 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(821952..822731) Rhodopseudomonas palustris DX-1 10062971 YP_004107143.1 CDS Rpdx1_0775 NC_014834.1 822728 823753 R PFAM: transport system permease protein; KEGG: nha:Nham_3730 transport system permease protein; transporter permease complement(822728..823753) Rhodopseudomonas palustris DX-1 10062972 YP_004107144.1 CDS Rpdx1_0776 NC_014834.1 823761 824819 R KEGG: bmj:BMULJ_01659 high-affinity nickel-transport protein; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter; high-affinity nickel-transporter complement(823761..824819) Rhodopseudomonas palustris DX-1 10062973 YP_004107145.1 CDS Rpdx1_0778 NC_014834.1 825477 826214 R PFAM: Methyltransferase type 12; KEGG: mlo:mlr1575 hypothetical protein; type 12 methyltransferase complement(825477..826214) Rhodopseudomonas palustris DX-1 10062975 YP_004107146.1 CDS Rpdx1_0779 NC_014834.1 826367 827590 D KEGG: bid:Bind_3049 hypothetical protein; hypothetical protein 826367..827590 Rhodopseudomonas palustris DX-1 10062976 YP_004107147.1 CDS Rpdx1_0780 NC_014834.1 827877 828770 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_3092 LysR family transcriptional regulator; LysR family transcriptional regulator 827877..828770 Rhodopseudomonas palustris DX-1 10062977 YP_004107148.1 CDS Rpdx1_0781 NC_014834.1 829062 829532 D PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bja:bll3138 formate dehydrogenase subunit gamma; NADH dehydrogenase (ubiquinone) 24 kDa subunit 829062..829532 Rhodopseudomonas palustris DX-1 10062978 YP_004107149.1 CDS Rpdx1_0782 NC_014834.1 829529 831085 D KEGG: bja:bll3137 NADH dehydrogenase I chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 829529..831085 Rhodopseudomonas palustris DX-1 10062979 YP_004107150.1 CDS Rpdx1_0783 NC_014834.1 831097 833943 D KEGG: bja:bll3136 formate dehydrogenase alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 831097..833943 Rhodopseudomonas palustris DX-1 10062980 YP_004107151.1 CDS Rpdx1_0784 NC_014834.1 833946 834773 D KEGG: bbt:BBta_3088 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; formate dehydrogenase family accessory protein fdhD 833946..834773 Rhodopseudomonas palustris DX-1 10062981 YP_004107152.1 CDS Rpdx1_0785 NC_014834.1 834763 834978 D KEGG: bja:bsl3134 putative NAD-dependent formate dehydrogenase; putative NAD-dependent formate dehydrogenase 834763..834978 Rhodopseudomonas palustris DX-1 10062982 YP_004107153.1 CDS Rpdx1_0786 NC_014834.1 835040 836689 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2314 MFS permease; major facilitator superfamily protein 835040..836689 Rhodopseudomonas palustris DX-1 10062983 YP_004107154.1 CDS Rpdx1_0787 NC_014834.1 837140 838393 D KEGG: bja:bll0591 hypothetical protein; hypothetical protein 837140..838393 Rhodopseudomonas palustris DX-1 10062984 YP_004107155.1 CDS Rpdx1_0788 NC_014834.1 838627 839211 D PFAM: cytochrome c class I; KEGG: bbt:BBta_0312 putative cytochrome c4 precursor; cytochrome c class I 838627..839211 Rhodopseudomonas palustris DX-1 10062985 YP_004107156.1 CDS Rpdx1_0789 NC_014834.1 839569 841665 D KEGG: rru:Rru_A1356 catalase; PFAM: Catalase related subgroup; Catalase domain protein; catalase 839569..841665 Rhodopseudomonas palustris DX-1 10062986 YP_004107157.1 CDS Rpdx1_0790 NC_014834.1 841820 842941 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: dal:Dalk_4842 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 841820..842941 Rhodopseudomonas palustris DX-1 10062987 YP_004107158.1 CDS Rpdx1_0791 NC_014834.1 842938 843885 D KEGG: bja:blr6138 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; ATPase 842938..843885 Rhodopseudomonas palustris DX-1 10062988 YP_004107159.1 CDS Rpdx1_0792 NC_014834.1 843885 845276 D PFAM: VWA containing CoxE family protein; KEGG: bja:blr6139 hypothetical protein; VWA containing CoxE family protein 843885..845276 Rhodopseudomonas palustris DX-1 10062989 YP_004107160.1 CDS Rpdx1_0793 NC_014834.1 845450 846976 D PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0667 putative O-succinylbenzoate--CoA ligase; AMP-dependent synthetase and ligase 845450..846976 Rhodopseudomonas palustris DX-1 10062990 YP_004107161.1 CDS Rpdx1_0794 NC_014834.1 847064 847345 R KEGG: rso:RSc2290 iron oxidase precursor oxidoreductase protein; iron oxidase oxidoreductase protein complement(847064..847345) Rhodopseudomonas palustris DX-1 10062991 YP_004107162.1 CDS Rpdx1_0795 NC_014834.1 847485 849917 R TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family; KEGG: gem:GM21_0398 hypothetical protein; decaheme-associated outer membrane protein complement(847485..849917) Rhodopseudomonas palustris DX-1 10062992 YP_004107163.1 CDS Rpdx1_0796 NC_014834.1 850014 851660 R TIGRFAM: decaheme c-type cytochrome, DmsE family; cytochrome C family protein; KEGG: nhl:Nhal_1192 cytochrome c family protein; decaheme c-type cytochrome, DmsE family complement(850014..851660) Rhodopseudomonas palustris DX-1 10062993 YP_004107164.1 CDS Rpdx1_0797 NC_014834.1 852208 853254 R TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: oca:OCAR_7383 sulfate/thiosulfate import ATP-binding protein CysA; SMART: AAA ATPase; sulfate ABC transporter ATPase complement(852208..853254) Rhodopseudomonas palustris DX-1 10062994 YP_004107165.1 CDS Rpdx1_0798 NC_014834.1 853244 854125 R KEGG: nwi:Nwi_2758 sulfate ABC transporter, permease protein CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease complement(853244..854125) Rhodopseudomonas palustris DX-1 10062995 YP_004107166.1 CDS Rpdx1_0799 NC_014834.1 854166 855002 R KEGG: nha:Nham_3559 sulfate ABC transporter, permease protein CysT; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease complement(854166..855002) Rhodopseudomonas palustris DX-1 10062996 YP_004107167.1 CDS Rpdx1_0800 NC_014834.1 855336 856325 R KEGG: oca:OCAR_7386 thiosulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter substrate-binding protein complement(855336..856325) Rhodopseudomonas palustris DX-1 10062997 YP_004107168.1 CDS Rpdx1_0801 NC_014834.1 856450 857190 R PFAM: phosphoadenosine phosphosulfate reductase; KEGG: nha:Nham_3561 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase complement(856450..857190) Rhodopseudomonas palustris DX-1 10062998 YP_004107169.1 CDS Rpdx1_0802 NC_014834.1 857474 858379 D PFAM: phosphoadenosine phosphosulfate reductase; KEGG: bbt:BBta_6983 sulfate adenylyltransferase subunit 2; phosphoadenosine phosphosulfate reductase 857474..858379 Rhodopseudomonas palustris DX-1 10062999 YP_004107170.1 CDS Rpdx1_0803 NC_014834.1 858401 860311 D TIGRFAM: sulfate adenylyltransferase, large subunit; adenylylsulfate kinase; KEGG: nwi:Nwi_2764 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase large subunit 858401..860311 Rhodopseudomonas palustris DX-1 10063000 YP_004107171.1 CDS Rpdx1_0804 NC_014834.1 860339 861316 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bja:bll7916 ABC transporter ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(860339..861316) Rhodopseudomonas palustris DX-1 10063001 YP_004107172.1 CDS Rpdx1_0805 NC_014834.1 861317 862729 R PFAM: Amidase; KEGG: bja:bll7917 putative glutamyl-tRNA(Gln) amidotransferase; amidase complement(861317..862729) Rhodopseudomonas palustris DX-1 10063002 YP_004107173.1 CDS Rpdx1_0806 NC_014834.1 862726 862920 R KEGG: bbt:BBta_7146 hypothetical protein; hypothetical protein complement(862726..862920) Rhodopseudomonas palustris DX-1 10063003 YP_004107174.1 CDS Rpdx1_0807 NC_014834.1 862934 863992 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bja:bll7918 ABC transporter ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(862934..863992) Rhodopseudomonas palustris DX-1 10063004 YP_004107175.1 CDS Rpdx1_0808 NC_014834.1 863997 864887 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1552 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component complement(863997..864887) Rhodopseudomonas palustris DX-1 10063005 YP_004107176.1 CDS Rpdx1_0809 NC_014834.1 864907 865860 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7920 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component complement(864907..865860) Rhodopseudomonas palustris DX-1 10063006 YP_004107177.1 CDS Rpdx1_0810 NC_014834.1 866057 867718 R PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_7150 putative oligopeptide ABC transporter (substrate binding protein); family 5 extracellular solute-binding protein complement(866057..867718) Rhodopseudomonas palustris DX-1 10063007 YP_004107178.1 CDS Rpdx1_0811 NC_014834.1 867906 869507 D PFAM: extracellular solute-binding protein family 5; KEGG: bja:blr7922 ABC transporter substrate-binding protein; family 5 extracellular solute-binding protein 867906..869507 Rhodopseudomonas palustris DX-1 10063008 YP_004107179.1 CDS Rpdx1_0812 NC_014834.1 869709 870143 R KEGG: sil:SPO0636 EF hand domain-containing protein; EF hand domain-containing protein complement(869709..870143) Rhodopseudomonas palustris DX-1 10063009 YP_004107180.1 CDS Rpdx1_0813 NC_014834.1 870164 872533 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE1205 TonB-dependent receptor protein; TonB-dependent receptor complement(870164..872533) Rhodopseudomonas palustris DX-1 10063010 YP_004107181.1 CDS Rpdx1_0814 NC_014834.1 872924 873628 D KEGG: mdi:METDI0368 putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 872924..873628 Rhodopseudomonas palustris DX-1 10063011 YP_004107182.1 CDS Rpdx1_0815 NC_014834.1 873787 875205 D KEGG: rsq:Rsph17025_3536 hypothetical protein; hypothetical protein 873787..875205 Rhodopseudomonas palustris DX-1 10063012 YP_004107183.1 CDS Rpdx1_0816 NC_014834.1 875383 876324 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: met:M446_6787 diguanylate cyclase/phosphodiesterase; SMART: GGDEF domain containing protein; PAS/PAC sensor -containing diguanylate cyclase 875383..876324 Rhodopseudomonas palustris DX-1 10063013 YP_004107184.1 CDS Rpdx1_0818 NC_014834.1 876858 877250 R KEGG: cvi:CV_2285 hypothetical protein; hypothetical protein complement(876858..877250) Rhodopseudomonas palustris DX-1 10063015 YP_004107185.1 CDS Rpdx1_0819 NC_014834.1 877309 877800 R KEGG: sfu:Sfum_1197 hypothetical protein; hypothetical protein complement(877309..877800) Rhodopseudomonas palustris DX-1 10063016 YP_004107186.1 CDS Rpdx1_0820 NC_014834.1 878147 879088 D KEGG: rcu:RCOM_1905080 hypothetical protein; hypothetical protein 878147..879088 Rhodopseudomonas palustris DX-1 10063017 YP_004107187.1 CDS Rpdx1_0821 NC_014834.1 879191 879982 D KEGG: reh:PHG265 transmembrane nitrate/nitrite sensor kinase; hypothetical protein 879191..879982 Rhodopseudomonas palustris DX-1 10063018 YP_004107188.1 CDS Rpdx1_0822 NC_014834.1 880108 881286 R manually curated; KEGG: pth:PTH_0722 hypothetical protein; hypothetical protein complement(880108..881286) Rhodopseudomonas palustris DX-1 10063019 YP_004107189.1 CDS Rpdx1_0823 NC_014834.1 881290 883575 R KEGG: pth:PTH_0723 hypothetical protein; manually curated; PFAM: stem cell self-renewal protein Piwi domain protein; hypothetical protein complement(881290..883575) Rhodopseudomonas palustris DX-1 10063020 YP_004107190.1 CDS Rpdx1_0825 NC_014834.1 886343 886747 D KEGG: oca:OCAR_4017 hypothetical protein; hypothetical protein 886343..886747 Rhodopseudomonas palustris DX-1 10063022 YP_004107191.1 CDS Rpdx1_0826 NC_014834.1 886836 887531 D KEGG: bac:BamMC406_2103 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 886836..887531 Rhodopseudomonas palustris DX-1 10063023 YP_004107192.1 CDS Rpdx1_0827 NC_014834.1 888161 888478 D PFAM: protein of unknown function DUF736; KEGG: oca:OCAR_4014 hypothetical protein; hypothetical protein 888161..888478 Rhodopseudomonas palustris DX-1 10063024 YP_004107193.1 CDS Rpdx1_0828 NC_014834.1 888547 889197 R KEGG: mea:Mex_2p0350 hypothetical protein; hypothetical protein complement(888547..889197) Rhodopseudomonas palustris DX-1 10063025 YP_004107194.1 CDS Rpdx1_0829 NC_014834.1 889471 890313 D KEGG: swi:Swit_3678 hypothetical protein; hypothetical protein 889471..890313 Rhodopseudomonas palustris DX-1 10063026 YP_004107195.1 CDS Rpdx1_0830 NC_014834.1 890619 890822 D KEGG: mes:Meso_2340 hypothetical protein; hypothetical protein 890619..890822 Rhodopseudomonas palustris DX-1 10063027 YP_004107196.1 CDS Rpdx1_0831 NC_014834.1 890893 891402 D KEGG: oca:OCAR_4011 hypothetical protein; hypothetical protein 890893..891402 Rhodopseudomonas palustris DX-1 10063028 YP_004107197.1 CDS Rpdx1_0832 NC_014834.1 891405 891710 R KEGG: mes:Meso_2328 hypothetical protein; hypothetical protein complement(891405..891710) Rhodopseudomonas palustris DX-1 10063029 YP_004107198.1 CDS Rpdx1_0833 NC_014834.1 891844 892065 D KEGG: bbt:BBta_1485 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 891844..892065 Rhodopseudomonas palustris DX-1 10063030 YP_004107199.1 CDS Rpdx1_0834 NC_014834.1 892269 892538 D KEGG: oca:OCAR_4009 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 892269..892538 Rhodopseudomonas palustris DX-1 10063031 YP_004107200.1 CDS Rpdx1_0835 NC_014834.1 892539 893666 D PFAM: Replication initiator protein A; KEGG: oca:OCAR_4008 replication protein A; replication initiator protein A 892539..893666 Rhodopseudomonas palustris DX-1 10063032 YP_004107201.1 CDS Rpdx1_0836 NC_014834.1 893663 894181 D KEGG: oca:OCAR_4005 hypothetical protein; hypothetical protein 893663..894181 Rhodopseudomonas palustris DX-1 10063033 YP_004107202.1 CDS Rpdx1_0837 NC_014834.1 894178 894723 D KEGG: zmn:Za10_1345 TraF peptidase. serine peptidase MEROPS family S26C; TIGRFAM: conjugative transfer signal peptidase TraF; PFAM: Peptidase S26, conserved region; conjugative transfer signal peptidase TraF 894178..894723 Rhodopseudomonas palustris DX-1 10063034 YP_004107203.1 CDS Rpdx1_0838 NC_014834.1 894791 895126 D PFAM: protein of unknown function DUF736; KEGG: zmn:Za10_1346 protein of unknown function DUF736; hypothetical protein 894791..895126 Rhodopseudomonas palustris DX-1 10063035 YP_004107204.1 CDS Rpdx1_0839 NC_014834.1 895131 896054 D PFAM: Lytic transglycosylase catalytic; KEGG: oca:OCAR_4002 lytic transglycosylase, catalytic; lytic transglycosylase 895131..896054 Rhodopseudomonas palustris DX-1 10063036 YP_004107205.1 CDS Rpdx1_0840 NC_014834.1 896368 898428 D KEGG: zmn:Za10_1349 hypothetical protein; hypothetical protein 896368..898428 Rhodopseudomonas palustris DX-1 10063037 YP_004107206.1 CDS Rpdx1_0841 NC_014834.1 898493 899185 R KEGG: mno:Mnod_0480 hypothetical protein; hypothetical protein complement(898493..899185) Rhodopseudomonas palustris DX-1 10063038 YP_004107207.1 CDS Rpdx1_0842 NC_014834.1 899212 899709 R PFAM: regulatory protein TetR; KEGG: adg:Adeg_1061 transcriptional regulator, TetR family; regulatory protein TetR complement(899212..899709) Rhodopseudomonas palustris DX-1 10063039 YP_004107208.1 CDS Rpdx1_0843 NC_014834.1 899916 900812 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: oca:OCAR_7611 transcriptional regulator, LysR family; LysR family transcriptional regulator 899916..900812 Rhodopseudomonas palustris DX-1 10063040 YP_004107209.1 CDS Rpdx1_0844 NC_014834.1 900957 902939 D PFAM: TRAG family protein; KEGG: oca:OCAR_7610 conjugal transfer coupling protein TraG; TRAG family protein 900957..902939 Rhodopseudomonas palustris DX-1 10063041 YP_004107210.1 CDS Rpdx1_0845 NC_014834.1 902950 903414 D KEGG: zmn:Za10_1355 CopG domain protein DNA-binding domain protein; CopG domain-containing/DNA-binding domain-containing protein 902950..903414 Rhodopseudomonas palustris DX-1 10063042 YP_004107211.1 CDS Rpdx1_0846 NC_014834.1 903556 904551 D manually curated; TIGRFAM: P-type conjugative transfer ATPase TrbB; KEGG: oca:OCAR_7608 P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; P-type conjugative transfer ATPase TrbB 903556..904551 Rhodopseudomonas palustris DX-1 10063043 YP_004107212.1 CDS Rpdx1_0847 NC_014834.1 904548 904880 D PFAM: Conjugal transfer protein TrbC; KEGG: pla:Plav_3542 conjugal transfer protein TrbC; conjugal transfer protein TrbC 904548..904880 Rhodopseudomonas palustris DX-1 10063044 YP_004107213.1 CDS Rpdx1_0848 NC_014834.1 904880 905158 D KEGG: oca:OCAR_7606 conjugal transfer protein TrbB; conjugal transfer protein TrbB 904880..905158 Rhodopseudomonas palustris DX-1 10063045 YP_004107214.1 CDS Rpdx1_0849 NC_014834.1 905173 907629 D KEGG: oca:OCAR_7605 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase; type IV transporter subunit CagE/TrbE/VirB 905173..907629 Rhodopseudomonas palustris DX-1 10063046 YP_004107215.1 CDS Rpdx1_0850 NC_014834.1 907626 908390 D TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: oca:OCAR_7604 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ 907626..908390 Rhodopseudomonas palustris DX-1 10063047 YP_004107216.1 CDS Rpdx1_0851 NC_014834.1 908401 908688 D KEGG: mes:Meso_2319 hypothetical protein; hypothetical protein 908401..908688 Rhodopseudomonas palustris DX-1 10063048 YP_004107217.1 CDS Rpdx1_0852 NC_014834.1 908692 910065 D KEGG: oca:OCAR_4186 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL 908692..910065 Rhodopseudomonas palustris DX-1 10063049 YP_004107218.1 CDS Rpdx1_0853 NC_014834.1 910062 910751 D KEGG: oca:OCAR_7601 conjugal transfer protein TrbF; conjugal transfer protein TrbF 910062..910751 Rhodopseudomonas palustris DX-1 10063050 YP_004107219.1 CDS Rpdx1_0854 NC_014834.1 910748 911704 D KEGG: oca:OCAR_7600 conjugal transfer protein TrbG/VirB9/CagX; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 910748..911704 Rhodopseudomonas palustris DX-1 10063051 YP_004107220.1 CDS Rpdx1_0855 NC_014834.1 911701 912843 D PFAM: conjugation TrbI family protein; KEGG: mes:Meso_0500 conjugation TrbI-like protein; conjugation TrbI family protein 911701..912843 Rhodopseudomonas palustris DX-1 10063052 YP_004107221.1 CDS Rpdx1_0856 NC_014834.1 912846 913064 D PFAM: Protein of unknown function DUF2274; KEGG: mpo:Mpop_3096 hypothetical protein; hypothetical protein 912846..913064 Rhodopseudomonas palustris DX-1 10063053 YP_004107222.1 CDS Rpdx1_0857 NC_014834.1 913227 914081 D manually curated; KEGG: hne:HNE_1724 hypothetical protein; hypothetical protein 913227..914081 Rhodopseudomonas palustris DX-1 10063054 YP_004107223.1 CDS Rpdx1_0858 NC_014834.1 914074 917364 D KEGG: bid:Bind_3765 helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 914074..917364 Rhodopseudomonas palustris DX-1 10063055 YP_004107224.1 CDS Rpdx1_0859 NC_014834.1 917606 917923 D KEGG: swi:Swit_3385 hypothetical protein; hypothetical protein 917606..917923 Rhodopseudomonas palustris DX-1 10063056 YP_004107225.1 CDS Rpdx1_0860 NC_014834.1 917920 918273 D KEGG: app:CAP2UW1_4477 hypothetical protein; hypothetical protein 917920..918273 Rhodopseudomonas palustris DX-1 10063057 YP_004107226.1 CDS Rpdx1_0861 NC_014834.1 918270 918668 D KEGG: sme:SMa2167 hypothetical protein; hypothetical protein 918270..918668 Rhodopseudomonas palustris DX-1 10063058 YP_004107227.1 CDS Rpdx1_0862 NC_014834.1 918665 920323 D PFAM: Resolvase domain; Recombinase; KEGG: swi:Swit_3384 resolvase domain-containing protein; resolvase domain-containing protein 918665..920323 Rhodopseudomonas palustris DX-1 10063059 YP_004107228.1 CDS Rpdx1_0863 NC_014834.1 920519 921841 D PFAM: integrase family protein; KEGG: bbt:BBta_7820 putative phage integrase; integrase family protein 920519..921841 Rhodopseudomonas palustris DX-1 10063060 YP_004107229.1 CDS Rpdx1_0864 NC_014834.1 921905 925414 R KEGG: sjp:SJA_C1-03600 putative helicase; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; DEAD/DEAH box helicase complement(921905..925414) Rhodopseudomonas palustris DX-1 10063061 YP_004107230.1 CDS Rpdx1_0865 NC_014834.1 925401 926183 R KEGG: sjp:SJA_C1-03610 hypothetical protein; hypothetical protein complement(925401..926183) Rhodopseudomonas palustris DX-1 10063062 YP_004107231.1 CDS Rpdx1_0866 NC_014834.1 926170 926955 R KEGG: gox:GOX1507 putative restriction endonuclease; putative restriction endonuclease complement(926170..926955) Rhodopseudomonas palustris DX-1 10063063 YP_004107232.1 CDS Rpdx1_0867 NC_014834.1 926952 928916 R KEGG: pde:Pden_1524 putative chromosome segregation SMC protein; putative chromosome segregation SMC protein complement(926952..928916) Rhodopseudomonas palustris DX-1 10063064 YP_004107233.1 CDS Rpdx1_0868 NC_014834.1 928906 933369 R KEGG: pde:Pden_1525 hypothetical protein; hypothetical protein complement(928906..933369) Rhodopseudomonas palustris DX-1 10063065 YP_004107234.1 CDS Rpdx1_0869 NC_014834.1 933373 936138 R KEGG: gox:GOX1504 ATP-dependent helicase HepA; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; helicase domain-containing protein complement(933373..936138) Rhodopseudomonas palustris DX-1 10063066 YP_004107235.1 CDS Rpdx1_0870 NC_014834.1 936143 941314 R KEGG: gox:GOX1503 ATP-dependent helicase Lhr; PFAM: Protein of unknown function DUF1998; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; hypothetical protein complement(936143..941314) Rhodopseudomonas palustris DX-1 10063067 YP_004107236.1 CDS Rpdx1_0873 NC_014834.1 941961 942833 R PFAM: Domain of unknown function DUF1814; KEGG: smd:Smed_5454 hypothetical protein; hypothetical protein complement(941961..942833) Rhodopseudomonas palustris DX-1 10063070 YP_004107237.1 CDS Rpdx1_0874 NC_014834.1 942826 943443 R KEGG: smd:Smed_5453 hypothetical protein; hypothetical protein complement(942826..943443) Rhodopseudomonas palustris DX-1 10063071 YP_004107238.1 CDS Rpdx1_0875 NC_014834.1 943755 944717 D PFAM: domain of unknown function DUF1738; KEGG: bbt:BBta_7394 putative ArdC antirestriction protein; hypothetical protein 943755..944717 Rhodopseudomonas palustris DX-1 10063072 YP_004107239.1 CDS Rpdx1_0876 NC_014834.1 944714 945085 D KEGG: nwi:Nwi_2122 hypothetical protein; hypothetical protein 944714..945085 Rhodopseudomonas palustris DX-1 10063073 YP_004107240.1 CDS Rpdx1_0877 NC_014834.1 945265 947388 D KEGG: bja:bll0065 putative DNA-binding protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; ParB domain-containing protein nuclease 945265..947388 Rhodopseudomonas palustris DX-1 10063074 YP_004107241.1 CDS Rpdx1_0878 NC_014834.1 947457 948521 D KEGG: gdj:Gdia_2785 hypothetical protein; hypothetical protein 947457..948521 Rhodopseudomonas palustris DX-1 10063075 YP_004107242.1 CDS Rpdx1_0879 NC_014834.1 948845 949765 D PFAM: Protein of unknown function DUF2493; KEGG: mes:Meso_0533 hypothetical protein; hypothetical protein 948845..949765 Rhodopseudomonas palustris DX-1 10063076 YP_004107243.1 CDS Rpdx1_0880 NC_014834.1 949915 950187 R KEGG: mlo:msl1988 hypothetical protein; hypothetical protein complement(949915..950187) Rhodopseudomonas palustris DX-1 10063077 YP_004107244.1 CDS Rpdx1_0881 NC_014834.1 950416 950733 D KEGG: mes:Meso_4060 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 950416..950733 Rhodopseudomonas palustris DX-1 10063078 YP_004107245.1 CDS Rpdx1_0882 NC_014834.1 950730 951215 D PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mkm:Mkms_3597 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 950730..951215 Rhodopseudomonas palustris DX-1 10063079 YP_004107246.1 CDS Rpdx1_0883 NC_014834.1 951858 952394 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: ara:Arad_9899 bifunctional deaminase-reductase, C-terminal; bifunctional deaminase-reductase domain-containing protein 951858..952394 Rhodopseudomonas palustris DX-1 10063080 YP_004107247.1 CDS Rpdx1_0884 NC_014834.1 952391 952954 D PFAM: regulatory protein TetR; KEGG: ara:Arad_9898 hypothetical protein; regulatory protein TetR 952391..952954 Rhodopseudomonas palustris DX-1 10063081 YP_004107248.1 CDS Rpdx1_0885 NC_014834.1 953113 953550 D KEGG: xau:Xaut_2861 hypothetical protein; hypothetical protein 953113..953550 Rhodopseudomonas palustris DX-1 10063082 YP_004107249.1 CDS Rpdx1_0886 NC_014834.1 954133 954453 D PFAM: protein of unknown function DUF736; KEGG: nwi:Nwi_2134 hypothetical protein; hypothetical protein 954133..954453 Rhodopseudomonas palustris DX-1 10063083 YP_004107250.1 CDS Rpdx1_0887 NC_014834.1 954517 954735 R KEGG: gdj:Gdia_2792 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(954517..954735) Rhodopseudomonas palustris DX-1 10063084 YP_004107251.1 CDS Rpdx1_0888 NC_014834.1 954906 955169 D KEGG: cak:Caul_3813 hypothetical protein; hypothetical protein 954906..955169 Rhodopseudomonas palustris DX-1 10063085 YP_004107252.1 CDS Rpdx1_0889 NC_014834.1 955312 955647 D KEGG: cak:Caul_3814 hypothetical protein; hypothetical protein 955312..955647 Rhodopseudomonas palustris DX-1 10063086 YP_004107253.1 CDS Rpdx1_0890 NC_014834.1 955595 956071 D KEGG: pla:Plav_3529 hypothetical protein; hypothetical protein 955595..956071 Rhodopseudomonas palustris DX-1 10063087 YP_004107254.1 CDS Rpdx1_0891 NC_014834.1 956199 956471 D KEGG: cak:Caul_3816 putative transcriptional regulator; putative transcriptional regulator 956199..956471 Rhodopseudomonas palustris DX-1 10063088 YP_004107255.1 CDS Rpdx1_0892 NC_014834.1 956480 957655 D KEGG: azc:AZC_3834 replication protein A; manually curated; PFAM: Replication initiator protein A; replication initiator protein A 956480..957655 Rhodopseudomonas palustris DX-1 10063089 YP_004107256.1 CDS Rpdx1_0893 NC_014834.1 957652 958290 D KEGG: cak:Caul_3818 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 957652..958290 Rhodopseudomonas palustris DX-1 10063090 YP_004107257.1 CDS Rpdx1_0894 NC_014834.1 958287 958538 D KEGG: mpo:Mpop_3078 hypothetical protein; hypothetical protein 958287..958538 Rhodopseudomonas palustris DX-1 10063091 YP_004107258.1 CDS Rpdx1_0895 NC_014834.1 958535 959056 D KEGG: oca:OCAR_4200 hypothetical protein; hypothetical protein 958535..959056 Rhodopseudomonas palustris DX-1 10063092 YP_004107259.1 CDS Rpdx1_0896 NC_014834.1 959053 959598 D PFAM: Peptidase S26, conserved region; KEGG: xau:Xaut_4011 peptidase S26C conjugative transfer signal peptidase TraF; peptidase S26 959053..959598 Rhodopseudomonas palustris DX-1 10063093 YP_004107260.1 CDS Rpdx1_0897 NC_014834.1 959647 959982 D PFAM: protein of unknown function DUF736; KEGG: pde:Pden_1509 hypothetical protein; hypothetical protein 959647..959982 Rhodopseudomonas palustris DX-1 10063094 YP_004107261.1 CDS Rpdx1_0898 NC_014834.1 959986 960753 D PFAM: Lytic transglycosylase catalytic; KEGG: oca:OCAR_4197 lytic transglycosylase, catalytic; lytic transglycosylase 959986..960753 Rhodopseudomonas palustris DX-1 10063095 YP_004107262.1 CDS Rpdx1_0899 NC_014834.1 960997 962736 D KEGG: oca:OCAR_4196 type IV secretory pathway VirD2 components; type IV secretory pathway VirD2 component 960997..962736 Rhodopseudomonas palustris DX-1 10063096 YP_004107263.1 CDS Rpdx1_0900 NC_014834.1 962854 963855 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mlo:mll7611 serine/threonine dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta complement(962854..963855) Rhodopseudomonas palustris DX-1 10063097 YP_004107264.1 CDS Rpdx1_0901 NC_014834.1 963852 964271 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: hmo:HM1_0326 conserved hypothetical protein, putative cupin domain protein; cupin complement(963852..964271) Rhodopseudomonas palustris DX-1 10063098 YP_004107265.1 CDS Rpdx1_0902 NC_014834.1 964290 964589 R SMART: regulatory protein ArsR; KEGG: mlo:mll3509 hypothetical protein; regulatory protein ArsR complement(964290..964589) Rhodopseudomonas palustris DX-1 10063099 YP_004107266.1 CDS Rpdx1_0903 NC_014834.1 964936 965250 D KEGG: nfa:nfa16520 hypothetical protein; hypothetical protein 964936..965250 Rhodopseudomonas palustris DX-1 10063100 YP_004107267.1 CDS Rpdx1_0904 NC_014834.1 965247 965600 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmj:BMULJ_04885 glyoxalase/bleomycin resistance protein; glyoxalase/bleomycin resistance protein/dioxygenase 965247..965600 Rhodopseudomonas palustris DX-1 10063101 YP_004107268.1 CDS Rpdx1_0905 NC_014834.1 965694 966920 R PFAM: major facilitator superfamily MFS_1; KEGG: cyn:Cyan7425_0013 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(965694..966920) Rhodopseudomonas palustris DX-1 10063102 YP_004107269.1 CDS Rpdx1_0906 NC_014834.1 967016 967912 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pag:PLES_30461 transcriptional regulator PtxR; LysR family transcriptional regulator 967016..967912 Rhodopseudomonas palustris DX-1 10063103 YP_004107270.1 CDS Rpdx1_0907 NC_014834.1 968141 970126 D PFAM: TRAG family protein; KEGG: xau:Xaut_2876 conjugal transfer coupling protein TraG; TRAG family protein 968141..970126 Rhodopseudomonas palustris DX-1 10063104 YP_004107271.1 CDS Rpdx1_0908 NC_014834.1 970130 970558 D KEGG: oca:OCAR_4194 helix-turn-helix protein of CopG family; helix-turn-helix domain-containing protein 970130..970558 Rhodopseudomonas palustris DX-1 10063105 YP_004107272.1 CDS Rpdx1_0909 NC_014834.1 970976 972148 D PFAM: aminotransferase class V; KEGG: scl:sce8911 class-V aminotransferase; class V aminotransferase 970976..972148 Rhodopseudomonas palustris DX-1 10063106 YP_004107273.1 CDS Rpdx1_0910 NC_014834.1 972448 973569 D PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: gym:GYMC10_3404 epoxide hydrolase domain protein; epoxide hydrolase domain-containing protein 972448..973569 Rhodopseudomonas palustris DX-1 10063107 YP_004107274.1 CDS Rpdx1_0911 NC_014834.1 973731 973988 D hypothetical protein 973731..973988 Rhodopseudomonas palustris DX-1 10063108 YP_004107275.1 CDS Rpdx1_0912 NC_014834.1 974166 975020 R PFAM: TrkA-N domain protein; KEGG: vap:Vapar_5657 NmrA family protein; TrkA-N domain-containing protein complement(974166..975020) Rhodopseudomonas palustris DX-1 10063109 YP_004107276.1 CDS Rpdx1_0913 NC_014834.1 975100 975783 R KEGG: cvi:CV_2335 DeoR family transcriptional regulator; DeoR family transcriptional regulator complement(975100..975783) Rhodopseudomonas palustris DX-1 10063110 YP_004107277.1 CDS Rpdx1_0914 NC_014834.1 976016 977041 D KEGG: xau:Xaut_3004 P-type conjugative transfer ATPase TrbB; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; P-type conjugative transfer ATPase TrbB 976016..977041 Rhodopseudomonas palustris DX-1 10063111 YP_004107278.1 CDS Rpdx1_0915 NC_014834.1 977022 977354 D PFAM: Conjugal transfer protein TrbC; KEGG: mes:Meso_0508 conjugal transfer protein TrbC; conjugal transfer protein TrbC 977022..977354 Rhodopseudomonas palustris DX-1 10063112 YP_004107279.1 CDS Rpdx1_0916 NC_014834.1 977354 977635 D KEGG: sjp:SJA_C1-19970 type IV secretory pathway TrbD component; type IV secretory pathway TrbD component 977354..977635 Rhodopseudomonas palustris DX-1 10063113 YP_004107280.1 CDS Rpdx1_0917 NC_014834.1 977652 980117 D SMART: AAA ATPase; KEGG: sjp:SJA_C1-19960 type IV secretory pathway VirB4 component; AAA ATPase 977652..980117 Rhodopseudomonas palustris DX-1 10063114 YP_004107281.1 CDS Rpdx1_0918 NC_014834.1 980104 980877 D TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: mes:Meso_0505 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ 980104..980877 Rhodopseudomonas palustris DX-1 10063115 YP_004107282.1 CDS Rpdx1_0919 NC_014834.1 980907 981188 D KEGG: pde:Pden_1479 hypothetical protein; hypothetical protein 980907..981188 Rhodopseudomonas palustris DX-1 10063116 YP_004107283.1 CDS Rpdx1_0920 NC_014834.1 981195 982547 D KEGG: xau:Xaut_2884 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL 981195..982547 Rhodopseudomonas palustris DX-1 10063117 YP_004107284.1 CDS Rpdx1_0921 NC_014834.1 982544 983233 D KEGG: oan:Oant_3219 conjugal transfer protein TrbF; conjugal transfer protein TrbF 982544..983233 Rhodopseudomonas palustris DX-1 10063118 YP_004107285.1 CDS Rpdx1_0922 NC_014834.1 983230 984213 D KEGG: oca:OCAR_4184 conjugal transfer protein TrbG/VirB9/CagX; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 983230..984213 Rhodopseudomonas palustris DX-1 10063119 YP_004107286.1 CDS Rpdx1_0923 NC_014834.1 984210 985385 D PFAM: conjugation TrbI family protein; KEGG: mes:Meso_0500 conjugation TrbI-like protein; conjugation TrbI family protein 984210..985385 Rhodopseudomonas palustris DX-1 10063120 YP_004107287.1 CDS Rpdx1_0924 NC_014834.1 985424 985612 D KEGG: bja:bsl8278 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2274; hypothetical protein 985424..985612 Rhodopseudomonas palustris DX-1 10063121 YP_004107288.1 CDS Rpdx1_0925 NC_014834.1 985584 986543 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mes:Meso_3862 LysR family transcriptional regulator; LysR family transcriptional regulator complement(985584..986543) Rhodopseudomonas palustris DX-1 10063122 YP_004107289.1 CDS Rpdx1_0926 NC_014834.1 986599 987084 D PFAM: regulatory protein MarR; KEGG: pde:Pden_4527 MarR family transcriptional regulator; regulatory protein MarR 986599..987084 Rhodopseudomonas palustris DX-1 10063123 YP_004107290.1 CDS Rpdx1_0927 NC_014834.1 987077 987829 D PFAM: Methyltransferase type 11; KEGG: pde:Pden_4526 methyltransferase type 11; type 11 methyltransferase 987077..987829 Rhodopseudomonas palustris DX-1 10063124 YP_004107291.1 CDS Rpdx1_0928 NC_014834.1 987826 988287 D manually curated; KEGG: sna:Snas_3802 hypothetical protein; hypothetical protein 987826..988287 Rhodopseudomonas palustris DX-1 10063125 YP_004107292.1 CDS Rpdx1_0929 NC_014834.1 988345 989229 D PFAM: alpha/beta hydrolase fold; KEGG: rde:RD1_2829 haloacetate dehalogenase H-1, putative; alpha/beta hydrolase fold protein 988345..989229 Rhodopseudomonas palustris DX-1 10063126 YP_004107293.1 CDS Rpdx1_0930 NC_014834.1 989471 989851 D PFAM: Camphor resistance CrcB protein; KEGG: gbe:GbCGDNIH1_1541 CrcB family protein; camphor resistance CrcB protein 989471..989851 Rhodopseudomonas palustris DX-1 10063127 YP_004107294.1 CDS Rpdx1_0933 NC_014834.1 990925 992199 D PFAM: beta-lactamase; KEGG: smt:Smal_2573 beta-lactamase; beta-lactamase 990925..992199 Rhodopseudomonas palustris DX-1 10063130 YP_004107295.1 CDS Rpdx1_0934 NC_014834.1 993177 993602 R PFAM: protein of unknown function DUF307; KEGG: bja:blr2954 hypothetical protein; hypothetical protein complement(993177..993602) Rhodopseudomonas palustris DX-1 10063132 YP_004107296.1 CDS Rpdx1_0935 NC_014834.1 993811 994134 D KEGG: bja:bsr4225 hypothetical protein; hypothetical protein 993811..994134 Rhodopseudomonas palustris DX-1 10063133 YP_004107297.1 CDS Rpdx1_0936 NC_014834.1 994167 995759 R KEGG: bja:bll2229 ACY1 bifunctional acylase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(994167..995759) Rhodopseudomonas palustris DX-1 10063134 YP_004107298.1 CDS Rpdx1_0937 NC_014834.1 995875 998586 R TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bja:blr4813 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(995875..998586) Rhodopseudomonas palustris DX-1 10063135 YP_004107299.1 CDS Rpdx1_0938 NC_014834.1 998802 999203 R KEGG: saj:SaurJH9_0901 phage-related protein-like protein; hypothetical protein complement(998802..999203) Rhodopseudomonas palustris DX-1 10063136 YP_004107300.1 CDS Rpdx1_0939 NC_014834.1 999637 999831 D KEGG: bra:BRADO7011 hypothetical protein; hypothetical protein 999637..999831 Rhodopseudomonas palustris DX-1 10063137 YP_004107301.1 CDS Rpdx1_0940 NC_014834.1 999832 1001097 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: xau:Xaut_4077 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein complement(999832..1001097) Rhodopseudomonas palustris DX-1 10063138 YP_004107302.1 CDS Rpdx1_0941 NC_014834.1 1001180 1001521 R KEGG: bra:BRADO0362 putative cytochrome c precursor (cytochrome c552)(CycB); putative cytochrome c complement(1001180..1001521) Rhodopseudomonas palustris DX-1 10063139 YP_004107303.1 CDS Rpdx1_0942 NC_014834.1 1001530 1001964 R KEGG: bja:blr0497 hypothetical protein; hypothetical protein complement(1001530..1001964) Rhodopseudomonas palustris DX-1 10063140 YP_004107304.1 CDS Rpdx1_0943 NC_014834.1 1002158 1003975 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: nha:Nham_3276 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase complement(1002158..1003975) Rhodopseudomonas palustris DX-1 10063141 YP_004107305.1 CDS Rpdx1_0944 NC_014834.1 1004153 1004995 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr0893 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 1004153..1004995 Rhodopseudomonas palustris DX-1 10063142 YP_004107306.1 CDS Rpdx1_0945 NC_014834.1 1005121 1006500 R PFAM: cytochrome P450; KEGG: bbt:BBta_7679 putative cytochrome P450 family protein; cytochrome P450 complement(1005121..1006500) Rhodopseudomonas palustris DX-1 10063143 YP_004107307.1 CDS Rpdx1_0946 NC_014834.1 1006624 1008018 R KEGG: bja:blr4264 putative adenylate cyclase protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase complement(1006624..1008018) Rhodopseudomonas palustris DX-1 10063144 YP_004107308.1 CDS Rpdx1_0947 NC_014834.1 1008075 1009043 D PFAM: peptidase M48 Ste24p; KEGG: bja:blr2450 heat shock protein HtpX; peptidase M48 Ste24p 1008075..1009043 Rhodopseudomonas palustris DX-1 10063145 YP_004107309.1 CDS Rpdx1_0948 NC_014834.1 1009310 1010725 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr0898 ATP-binding protein; major facilitator superfamily protein 1009310..1010725 Rhodopseudomonas palustris DX-1 10063146 YP_004107310.1 CDS Rpdx1_0949 NC_014834.1 1010722 1011909 R PFAM: aminotransferase class V; KEGG: bbt:BBta_0544 putative aminotransferase, class V; class V aminotransferase complement(1010722..1011909) Rhodopseudomonas palustris DX-1 10063147 YP_004107311.1 CDS Rpdx1_0950 NC_014834.1 1011966 1012820 R KEGG: mlo:mlr2577 hypothetical protein; hypothetical protein complement(1011966..1012820) Rhodopseudomonas palustris DX-1 10063148 YP_004107312.1 CDS Rpdx1_0951 NC_014834.1 1012850 1013581 R KEGG: bbt:BBta_0545 putative nuclease-like protein; PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); nuclease complement(1012850..1013581) Rhodopseudomonas palustris DX-1 10063149 YP_004107313.1 CDS Rpdx1_0952 NC_014834.1 1013696 1015435 R KEGG: nha:Nham_3607 hypothetical protein; hypothetical protein complement(1013696..1015435) Rhodopseudomonas palustris DX-1 10063150 YP_004107314.1 CDS Rpdx1_0953 NC_014834.1 1015879 1016745 D PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bra:BRADO6982 putative peptidase; caspase-like; peptidase C14 caspase catalytic subunit p20 1015879..1016745 Rhodopseudomonas palustris DX-1 10063151 YP_004107315.1 CDS Rpdx1_0954 NC_014834.1 1016836 1017594 R KEGG: bja:bll1137 carbonic anhydrase; PFAM: carbonic anhydrase; carbonate dehydratase complement(1016836..1017594) Rhodopseudomonas palustris DX-1 10063152 YP_004107316.1 CDS Rpdx1_0955 NC_014834.1 1017685 1018317 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: nha:Nham_0557 putative phage repressor; putative phage repressor complement(1017685..1018317) Rhodopseudomonas palustris DX-1 10063153 YP_004107317.1 CDS Rpdx1_0956 NC_014834.1 1018644 1018988 D PFAM: protein of unknown function DUF952; KEGG: nha:Nham_0556 hypothetical protein; hypothetical protein 1018644..1018988 Rhodopseudomonas palustris DX-1 10063154 YP_004107318.1 CDS Rpdx1_0957 NC_014834.1 1018985 1020079 D TIGRFAM: dihydroorotate dehydrogenase; KEGG: bja:blr1140 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase; dihydroorotate dehydrogenase 1018985..1020079 Rhodopseudomonas palustris DX-1 10063155 YP_004107319.1 CDS Rpdx1_0958 NC_014834.1 1020412 1021146 R KEGG: bja:bll1142 hypothetical protein; hypothetical protein complement(1020412..1021146) Rhodopseudomonas palustris DX-1 10063156 YP_004107320.1 CDS Rpdx1_0959 NC_014834.1 1021293 1022000 R PFAM: carbonic anhydrase; KEGG: msl:Msil_2753 carbonic anhydrase; carbonic anhydrase complement(1021293..1022000) Rhodopseudomonas palustris DX-1 10063157 YP_004107321.1 CDS Rpdx1_0960 NC_014834.1 1022137 1023435 R KEGG: bja:bll1141 DNA-damage-inducible protein F; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(1022137..1023435) Rhodopseudomonas palustris DX-1 10063158 YP_004107322.1 CDS Rpdx1_0961 NC_014834.1 1023476 1023778 R KEGG: nwi:Nwi_0463 hypothetical protein; hypothetical protein complement(1023476..1023778) Rhodopseudomonas palustris DX-1 10063159 YP_004107323.1 CDS Rpdx1_0962 NC_014834.1 1023852 1025693 R PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: bja:bll1144 ATP-dependent DNA ligase; ATP dependent DNA ligase complement(1023852..1025693) Rhodopseudomonas palustris DX-1 10063160 YP_004107324.1 CDS Rpdx1_0963 NC_014834.1 1025690 1026736 R KEGG: bbt:BBta_0799 putative metallo-hydrolase/oxidoreductase; putative metallo-hydrolase/oxidoreductase complement(1025690..1026736) Rhodopseudomonas palustris DX-1 10063161 YP_004107325.1 CDS Rpdx1_0964 NC_014834.1 1026851 1028197 R PFAM: porin; KEGG: nha:Nham_0239 putative outer membrane protein; porin complement(1026851..1028197) Rhodopseudomonas palustris DX-1 10063162 YP_004107326.1 CDS Rpdx1_0965 NC_014834.1 1028536 1029756 D PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_0801 putative amino-acid ABC transport system, periplasmic binding protein; extracellular ligand-binding receptor 1028536..1029756 Rhodopseudomonas palustris DX-1 10063163 YP_004107327.1 CDS Rpdx1_0966 NC_014834.1 1029851 1032619 D manually curated; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: bbt:BBta_0802 putative ATP dependent DNA helicase; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 1029851..1032619 Rhodopseudomonas palustris DX-1 10063164 YP_004107328.1 CDS Rpdx1_0967 NC_014834.1 1032718 1033440 D KEGG: nha:Nham_0241 metallophosphoesterase; metallophosphoesterase 1032718..1033440 Rhodopseudomonas palustris DX-1 10063165 YP_004107329.1 CDS Rpdx1_0968 NC_014834.1 1033604 1034467 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:bll1150 transcriptional regulatory protein; LysR family transcriptional regulator complement(1033604..1034467) Rhodopseudomonas palustris DX-1 10063166 YP_004107330.1 CDS Rpdx1_0969 NC_014834.1 1034569 1035489 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_0243 hypothetical protein; hypothetical protein 1034569..1035489 Rhodopseudomonas palustris DX-1 10063167 YP_004107331.1 CDS Rpdx1_0970 NC_014834.1 1035569 1036915 D KEGG: bja:bll8038 putative manganese transport protein; putative manganese transport protein 1035569..1036915 Rhodopseudomonas palustris DX-1 10063168 YP_004107332.1 CDS Rpdx1_0971 NC_014834.1 1037081 1037878 R PFAM: hypothetical protein; KEGG: bra:BRADO6731 hypothetical protein; hypothetical protein complement(1037081..1037878) Rhodopseudomonas palustris DX-1 10063169 YP_004107333.1 CDS Rpdx1_0972 NC_014834.1 1037878 1038840 R PFAM: protein of unknown function DUF81; KEGG: bja:bll1154 hypothetical protein; hypothetical protein complement(1037878..1038840) Rhodopseudomonas palustris DX-1 10063170 YP_004107334.1 CDS Rpdx1_0973 NC_014834.1 1039037 1042420 R KEGG: bja:bll1155 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein complement(1039037..1042420) Rhodopseudomonas palustris DX-1 10063171 YP_004107335.1 CDS Rpdx1_0974 NC_014834.1 1042674 1043231 R PFAM: regulatory protein TetR; KEGG: bja:blr0601 transcriptional regulatory protein; regulatory protein TetR complement(1042674..1043231) Rhodopseudomonas palustris DX-1 10063172 YP_004107336.1 CDS Rpdx1_0975 NC_014834.1 1043564 1043950 D KEGG: bbt:BBta_0814 hypothetical protein; hypothetical protein 1043564..1043950 Rhodopseudomonas palustris DX-1 10063173 YP_004107337.1 CDS Rpdx1_0976 NC_014834.1 1044044 1045834 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1158 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1044044..1045834 Rhodopseudomonas palustris DX-1 10063174 YP_004107338.1 CDS Rpdx1_0977 NC_014834.1 1045988 1047196 D TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bra:BRADO6724 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 1045988..1047196 Rhodopseudomonas palustris DX-1 10063175 YP_004107339.1 CDS Rpdx1_0979 NC_014834.1 1047396 1049612 D PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_0817 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein 1047396..1049612 Rhodopseudomonas palustris DX-1 10063177 YP_004107340.1 CDS Rpdx1_0980 NC_014834.1 1049923 1050537 R PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_0818 glutathione S-transferase; glutathione S-transferase domain-containing protein complement(1049923..1050537) Rhodopseudomonas palustris DX-1 10063178 YP_004107341.1 CDS Rpdx1_0981 NC_014834.1 1050617 1051528 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dsh:Dshi_2523 putative hydrogen peroxide-inducible genes activator; LysR family transcriptional regulator complement(1050617..1051528) Rhodopseudomonas palustris DX-1 10063179 YP_004107342.1 CDS Rpdx1_0982 NC_014834.1 1051632 1052273 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: alv:Alvin_1006 peroxiredoxin; alkyl hydroperoxide reductase 1051632..1052273 Rhodopseudomonas palustris DX-1 10063180 YP_004107343.1 CDS Rpdx1_0983 NC_014834.1 1052349 1052792 D PFAM: Ferritin Dps family protein; KEGG: pzu:PHZ_p0100 DNA-binding ferritin-like protein (oxidative damage protectant); ferritin Dps family protein 1052349..1052792 Rhodopseudomonas palustris DX-1 10063181 YP_004107344.1 CDS Rpdx1_0984 NC_014834.1 1052858 1053730 D KEGG: mch:Mchl_4146 beta-lactamase domain protein; beta-lactamase domain-containing protein 1052858..1053730 Rhodopseudomonas palustris DX-1 10063182 YP_004107345.1 CDS Rpdx1_0985 NC_014834.1 1053898 1054467 D KEGG: bra:BRADO6719 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 1053898..1054467 Rhodopseudomonas palustris DX-1 10063183 YP_004107346.1 CDS Rpdx1_0986 NC_014834.1 1054561 1055931 D TIGRFAM: glutamate/cysteine ligase; KEGG: bja:blr1164 putative glutathione synthetase; PFAM: glutamate--cysteine ligase GCS2; glutamate/cysteine ligase 1054561..1055931 Rhodopseudomonas palustris DX-1 10063184 YP_004107347.1 CDS Rpdx1_0987 NC_014834.1 1056111 1056629 D SMART: Apple; KEGG: bja:blr1165 hypothetical protein; hypothetical protein 1056111..1056629 Rhodopseudomonas palustris DX-1 10063185 YP_004107348.1 CDS Rpdx1_0988 NC_014834.1 1056648 1057418 R TIGRFAM: signal peptidase I; KEGG: nha:Nham_0252 peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I complement(1056648..1057418) Rhodopseudomonas palustris DX-1 10063186 YP_004107349.1 CDS Rpdx1_0989 NC_014834.1 1057415 1058842 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bbt:BBta_0825 putative peptidase TldD; peptidase U62 modulator of DNA gyrase complement(1057415..1058842) Rhodopseudomonas palustris DX-1 10063187 YP_004107350.1 CDS Rpdx1_0990 NC_014834.1 1058966 1059181 D PFAM: protein of unknown function DUF433; KEGG: ana:asr2958 hypothetical protein; hypothetical protein 1058966..1059181 Rhodopseudomonas palustris DX-1 10063188 YP_004107351.1 CDS Rpdx1_0991 NC_014834.1 1059185 1059298 R hypothetical protein complement(1059185..1059298) Rhodopseudomonas palustris DX-1 10063189 YP_004107352.1 CDS Rpdx1_0992 NC_014834.1 1059482 1059952 D KEGG: rso:RS02614 putative transcription regulator protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 1059482..1059952 Rhodopseudomonas palustris DX-1 10063190 YP_004107353.1 CDS Rpdx1_0993 NC_014834.1 1060075 1060500 D KEGG: pmy:Pmen_2630 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein; peroxiredoxin 1060075..1060500 Rhodopseudomonas palustris DX-1 10063191 YP_004107354.1 CDS Rpdx1_0995 NC_014834.1 1060722 1061270 R PFAM: Invasion associated locus B family protein; KEGG: nwi:Nwi_0222 invasion associated locus B; invasion associated locus B family protein complement(1060722..1061270) Rhodopseudomonas palustris DX-1 10063193 YP_004107355.1 CDS Rpdx1_0996 NC_014834.1 1061692 1062549 D KEGG: bja:blr1170 cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c oxidase subunit II 1061692..1062549 Rhodopseudomonas palustris DX-1 10063194 YP_004107356.1 CDS Rpdx1_0997 NC_014834.1 1062618 1064243 D KEGG: bra:BRADO6706 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 1062618..1064243 Rhodopseudomonas palustris DX-1 10063195 YP_004107357.1 CDS Rpdx1_0998 NC_014834.1 1064316 1065254 D KEGG: bja:blr1172 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 1064316..1065254 Rhodopseudomonas palustris DX-1 10063196 YP_004107358.1 CDS Rpdx1_0999 NC_014834.1 1065266 1065433 D KEGG: oca:OCAR_4688 hypothetical protein; hypothetical protein 1065266..1065433 Rhodopseudomonas palustris DX-1 10063197 YP_004107359.1 CDS Rpdx1_1000 NC_014834.1 1065448 1066074 D PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: nha:Nham_3459 cytochrome c oxidase assembly protein; cytochrome c oxidase assembly protein CtaG/Cox11 1065448..1066074 Rhodopseudomonas palustris DX-1 10063198 YP_004107360.1 CDS Rpdx1_1001 NC_014834.1 1066146 1067000 D PFAM: cytochrome c oxidase subunit III; KEGG: bbt:BBta_0833 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 1066146..1067000 Rhodopseudomonas palustris DX-1 10063199 YP_004107361.1 CDS Rpdx1_1002 NC_014834.1 1067164 1067559 D PFAM: protein of unknown function DUF983; KEGG: bja:blr1176 hypothetical protein; hypothetical protein 1067164..1067559 Rhodopseudomonas palustris DX-1 10063200 YP_004107362.1 CDS Rpdx1_1003 NC_014834.1 1067556 1068338 D PFAM: Surfeit locus 1 family protein; KEGG: oca:OCAR_4692 surfeit locus 1 family protein; surfeit locus 1 family protein 1067556..1068338 Rhodopseudomonas palustris DX-1 10063201 YP_004107363.1 CDS Rpdx1_1004 NC_014834.1 1068430 1068660 D PFAM: protein of unknown function UPF0150; KEGG: rrs:RoseRS_1435 hypothetical protein; hypothetical protein 1068430..1068660 Rhodopseudomonas palustris DX-1 10063202 YP_004107364.1 CDS Rpdx1_1005 NC_014834.1 1068662 1068898 D PFAM: YcfA family protein; KEGG: mta:Moth_0298 YcfA-like; hypothetical protein 1068662..1068898 Rhodopseudomonas palustris DX-1 10063203 YP_004107365.1 CDS Rpdx1_1006 NC_014834.1 1069105 1070523 D TIGRFAM: threonine synthase; KEGG: nha:Nham_0262 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase 1069105..1070523 Rhodopseudomonas palustris DX-1 10063204 YP_004107366.1 CDS Rpdx1_1007 NC_014834.1 1070520 1071809 D KEGG: bja:blr1182 mitochondrial processing peptidase-like protein; PFAM: peptidase M16 domain protein; processing peptidase 1070520..1071809 Rhodopseudomonas palustris DX-1 10063205 YP_004107367.1 CDS Rpdx1_1008 NC_014834.1 1071870 1072457 D KEGG: bja:blr1183 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Ribosomal-protein-alanine N-acetyltransferase 1071870..1072457 Rhodopseudomonas palustris DX-1 10063206 YP_004107368.1 CDS Rpdx1_1009 NC_014834.1 1072553 1073206 D KEGG: bja:blr1184 hypothetical protein; hypothetical protein 1072553..1073206 Rhodopseudomonas palustris DX-1 10063207 YP_004107369.1 CDS Rpdx1_1010 NC_014834.1 1073722 1074213 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: nha:Nham_0266 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' complement(1073722..1074213) Rhodopseudomonas palustris DX-1 10063208 YP_004107370.1 CDS Rpdx1_1011 NC_014834.1 1074218 1074775 R PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: nwi:Nwi_0236 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' complement(1074218..1074775) Rhodopseudomonas palustris DX-1 10063209 YP_004107371.1 CDS Rpdx1_1012 NC_014834.1 1074833 1075060 R PFAM: H+transporting two-sector ATPase C subunit; KEGG: nwi:Nwi_0237 F0F1 ATP synthase subunit C; H+transporting two-sector ATPase subunit C complement(1074833..1075060) Rhodopseudomonas palustris DX-1 10063210 YP_004107372.1 CDS Rpdx1_1013 NC_014834.1 1075109 1075855 R KEGG: nwi:Nwi_0238 F0F1 ATP synthase subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; ATP synthase F0 subunit A complement(1075109..1075855) Rhodopseudomonas palustris DX-1 10063211 YP_004107373.1 CDS Rpdx1_1014 NC_014834.1 1075925 1076311 R manually curated; KEGG: nha:Nham_0270 FoF1 ATP synthase, subunit I; FoF1 ATP synthase subunit I complement(1075925..1076311) Rhodopseudomonas palustris DX-1 10063212 YP_004107374.1 CDS Rpdx1_1015 NC_014834.1 1076614 1077237 D PFAM: DSBA oxidoreductase; KEGG: bbt:BBta_0848 hypothetical protein; DSBA oxidoreductase 1076614..1077237 Rhodopseudomonas palustris DX-1 10063213 YP_004107375.1 CDS Rpdx1_1016 NC_014834.1 1077301 1077891 D KEGG: bja:blr1191 hypothetical protein; hypothetical protein 1077301..1077891 Rhodopseudomonas palustris DX-1 10063214 YP_004107376.1 CDS Rpdx1_1017 NC_014834.1 1077915 1078388 D PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein; hypothetical protein 1077915..1078388 Rhodopseudomonas palustris DX-1 10063215 YP_004107377.1 CDS Rpdx1_1018 NC_014834.1 1078530 1080194 R KEGG: bbt:BBta_0851 MFS family sugar transporter; MFS family sugar transporter complement(1078530..1080194) Rhodopseudomonas palustris DX-1 10063216 YP_004107378.1 CDS Rpdx1_1019 NC_014834.1 1080530 1081207 D KEGG: bra:BRADO6680 two-component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; LuxR family two component transcriptional regulator 1080530..1081207 Rhodopseudomonas palustris DX-1 10063217 YP_004107379.1 CDS Rpdx1_1020 NC_014834.1 1081490 1084999 R KEGG: bbt:BBta_0860 putative two-component hybrid sensor histidine kinase and response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Na+/solute symporter; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; ATP-binding protein complement(1081490..1084999) Rhodopseudomonas palustris DX-1 10063218 YP_004107380.1 CDS Rpdx1_1021 NC_014834.1 1085176 1086405 R TIGRFAM: 5-aminolevulinic acid synthase; KEGG: bra:BRADO6672 5-aminolevulinate synthase; PFAM: aminotransferase class I and II; 5-aminolevulinate synthase complement(1085176..1086405) Rhodopseudomonas palustris DX-1 10063219 YP_004107381.1 CDS Rpdx1_1022 NC_014834.1 1086630 1087691 R KEGG: bja:bll1202 hypothetical protein; hypothetical protein complement(1086630..1087691) Rhodopseudomonas palustris DX-1 10063220 YP_004107382.1 CDS Rpdx1_1023 NC_014834.1 1087832 1089970 R KEGG: bja:bll1203 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(1087832..1089970) Rhodopseudomonas palustris DX-1 10063221 YP_004107383.1 CDS Rpdx1_1024 NC_014834.1 1090194 1090901 R KEGG: bra:BRADO6669 putative outer-membrane immunogenic protein precursor; putative secreted protein; putative outer-membrane immunogenic protein complement(1090194..1090901) Rhodopseudomonas palustris DX-1 10063222 YP_004107384.1 CDS Rpdx1_1025 NC_014834.1 1091467 1092216 D KEGG: nha:Nham_3428 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1091467..1092216 Rhodopseudomonas palustris DX-1 10063223 YP_004107385.1 CDS Rpdx1_1026 NC_014834.1 1092225 1093094 D PFAM: ABC-3 protein; KEGG: nwi:Nwi_0915 ABC-type Mn2+/Zn2+ transport systems permease components; ABC-3 protein 1092225..1093094 Rhodopseudomonas palustris DX-1 10063224 YP_004107386.1 CDS Rpdx1_1027 NC_014834.1 1093100 1094005 D PFAM: periplasmic solute binding protein; KEGG: oca:OCAR_4907 periplasmic chelated iron-binding protein YfeA; periplasmic solute-binding protein 1093100..1094005 Rhodopseudomonas palustris DX-1 10063225 YP_004107387.1 CDS Rpdx1_1028 NC_014834.1 1094128 1095177 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bbt:BBta_1342 putative cobalamin synthesis protein/P47K family protein; cobalamin synthesis protein P47K 1094128..1095177 Rhodopseudomonas palustris DX-1 10063226 YP_004107388.1 CDS Rpdx1_1029 NC_014834.1 1095174 1096193 D PFAM: WD40 repeat, subgroup; KEGG: bja:bll7767 hypothetical protein; WD40 repeat-containing protein 1095174..1096193 Rhodopseudomonas palustris DX-1 10063227 YP_004107389.1 CDS Rpdx1_1030 NC_014834.1 1096228 1096950 D PFAM: MgtC/SapB transporter; KEGG: bja:bll7766 hypothetical protein; MgtC/SapB transporter 1096228..1096950 Rhodopseudomonas palustris DX-1 10063228 YP_004107390.1 CDS Rpdx1_1031 NC_014834.1 1097058 1097411 D KEGG: oca:OCAR_4911 hypothetical protein; hypothetical protein 1097058..1097411 Rhodopseudomonas palustris DX-1 10063229 YP_004107391.1 CDS Rpdx1_1032 NC_014834.1 1097681 1099111 R KEGG: nwi:Nwi_0921 homospermidine synthase; homospermidine synthase complement(1097681..1099111) Rhodopseudomonas palustris DX-1 10063230 YP_004107392.1 CDS Rpdx1_1033 NC_014834.1 1099230 1099634 R PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: nha:Nham_3421 GreA/GreB family elongation factor; GreA/GreB family elongation factor complement(1099230..1099634) Rhodopseudomonas palustris DX-1 10063231 YP_004107393.1 CDS Rpdx1_1034 NC_014834.1 1099899 1100285 R PFAM: Endoribonuclease L-PSP; KEGG: bja:blr7761 hypothetical protein; endoribonuclease L-PSP complement(1099899..1100285) Rhodopseudomonas palustris DX-1 10063232 YP_004107394.1 CDS Rpdx1_1035 NC_014834.1 1100382 1100549 R hypothetical protein complement(1100382..1100549) Rhodopseudomonas palustris DX-1 10063233 YP_004107395.1 CDS Rpdx1_1036 NC_014834.1 1100560 1101147 R PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr7760 hypothetical protein; N-acetyltransferase GCN5 complement(1100560..1101147) Rhodopseudomonas palustris DX-1 10063234 YP_004107396.1 CDS Rpdx1_1037 NC_014834.1 1101360 1102502 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: oca:OCAR_4918 ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 complement(1101360..1102502) Rhodopseudomonas palustris DX-1 10063235 YP_004107397.1 CDS Rpdx1_1038 NC_014834.1 1103168 1103428 R KEGG: bra:BRADO6259 hypothetical protein; hypothetical protein complement(1103168..1103428) Rhodopseudomonas palustris DX-1 10063236 YP_004107398.1 CDS Rpdx1_1039 NC_014834.1 1103635 1105725 D KEGG: bja:bll7756 peptidyl-dipeptidase; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; peptidyl-dipeptidase Dcp 1103635..1105725 Rhodopseudomonas palustris DX-1 10063237 YP_004107399.1 CDS Rpdx1_1040 NC_014834.1 1105730 1106383 D PFAM: protein of unknown function DUF1007; KEGG: bja:bll7755 hypothetical protein; hypothetical protein 1105730..1106383 Rhodopseudomonas palustris DX-1 10063238 YP_004107400.1 CDS Rpdx1_1041 NC_014834.1 1106380 1107546 D PFAM: high-affinity nickel-transporter; KEGG: bja:bll7754 hypothetical protein; high-affinity nickel-transporter 1106380..1107546 Rhodopseudomonas palustris DX-1 10063239 YP_004107401.1 CDS Rpdx1_1042 NC_014834.1 1107721 1108758 D TIGRFAM: ferrochelatase; KEGG: nha:Nham_3415 ferrochelatase; PFAM: ferrochelatase; ferrochelatase 1107721..1108758 Rhodopseudomonas palustris DX-1 10063240 YP_004107402.1 CDS Rpdx1_1043 NC_014834.1 1108982 1109983 D KEGG: bja:bll7750 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein 1108982..1109983 Rhodopseudomonas palustris DX-1 10063241 YP_004107403.1 CDS Rpdx1_1044 NC_014834.1 1110000 1110449 D PFAM: protein of unknown function DUF107; KEGG: bbt:BBta_1360 hypothetical protein; hypothetical protein 1110000..1110449 Rhodopseudomonas palustris DX-1 10063242 YP_004107404.1 CDS Rpdx1_1045 NC_014834.1 1110554 1111414 R KEGG: bpy:Bphyt_0019 transcriptional regulator, AraC family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(1110554..1111414) Rhodopseudomonas palustris DX-1 10063243 YP_004107405.1 CDS Rpdx1_1046 NC_014834.1 1111766 1112779 R TIGRFAM: KpsF/GutQ family protein; KEGG: nha:Nham_3413 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; KpsF/GutQ family protein complement(1111766..1112779) Rhodopseudomonas palustris DX-1 10063244 YP_004107406.1 CDS Rpdx1_1047 NC_014834.1 1112985 1114697 D manually curated; KEGG: bja:bll7745 hypothetical protein; hypothetical protein 1112985..1114697 Rhodopseudomonas palustris DX-1 10063245 YP_004107407.1 CDS Rpdx1_1048 NC_014834.1 1114772 1115044 R KEGG: bra:BRADO1091 hypothetical protein; hypothetical protein complement(1114772..1115044) Rhodopseudomonas palustris DX-1 10063246 YP_004107408.1 CDS Rpdx1_1049 NC_014834.1 1115218 1116726 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:bll1500 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1115218..1116726 Rhodopseudomonas palustris DX-1 10063247 YP_004107409.1 CDS Rpdx1_1050 NC_014834.1 1116754 1117629 R TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: bbt:BBta_6959 UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase complement(1116754..1117629) Rhodopseudomonas palustris DX-1 10063248 YP_004107410.1 CDS Rpdx1_1051 NC_014834.1 1117753 1118697 R PFAM: alpha/beta hydrolase fold; KEGG: bja:bll7739 lysophospholipase; alpha/beta hydrolase fold protein complement(1117753..1118697) Rhodopseudomonas palustris DX-1 10063249 YP_004107411.1 CDS Rpdx1_1052 NC_014834.1 1118914 1119390 D PFAM: heat shock protein Hsp20; KEGG: nwi:Nwi_2952 heat shock protein HSP20; heat shock protein Hsp20 1118914..1119390 Rhodopseudomonas palustris DX-1 10063250 YP_004107412.1 CDS Rpdx1_1053 NC_014834.1 1119490 1120266 R KEGG: bja:bll7742 hypothetical protein; hypothetical protein complement(1119490..1120266) Rhodopseudomonas palustris DX-1 10063251 YP_004107413.1 CDS Rpdx1_1054 NC_014834.1 1120681 1125420 D KEGG: nha:Nham_1138 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase 1120681..1125420 Rhodopseudomonas palustris DX-1 10063252 YP_004107414.1 CDS Rpdx1_1055 NC_014834.1 1125618 1127072 D KEGG: bbt:BBta_1370 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase small subunit 1125618..1127072 Rhodopseudomonas palustris DX-1 10063253 YP_004107415.1 CDS Rpdx1_1056 NC_014834.1 1128444 1129220 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pzu:PHZ_c1118 3-oxoacyl-[ACP] reductase; short-chain dehydrogenase/reductase SDR complement(1128444..1129220) Rhodopseudomonas palustris DX-1 10063254 YP_004107416.1 CDS Rpdx1_1057 NC_014834.1 1129361 1130095 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr1495 oxidoreductase; short-chain dehydrogenase/reductase SDR 1129361..1130095 Rhodopseudomonas palustris DX-1 10063255 YP_004107417.1 CDS Rpdx1_1058 NC_014834.1 1130285 1131907 R PFAM: protein of unknown function DUF459; KEGG: bja:bll1497 hypothetical protein; hypothetical protein complement(1130285..1131907) Rhodopseudomonas palustris DX-1 10063256 YP_004107418.1 CDS Rpdx1_1059 NC_014834.1 1132054 1132977 R KEGG: bja:blr7382 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase complement(1132054..1132977) Rhodopseudomonas palustris DX-1 10063257 YP_004107419.1 CDS Rpdx1_1060 NC_014834.1 1133245 1134666 R KEGG: bja:bll1498 transglycolase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; lytic murein transglycosylase complement(1133245..1134666) Rhodopseudomonas palustris DX-1 10063258 YP_004107420.1 CDS Rpdx1_1061 NC_014834.1 1134854 1135486 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bra:BRADO6219 LysE family amino acid efflux protein; lysine exporter protein LysE/YggA 1134854..1135486 Rhodopseudomonas palustris DX-1 10063259 YP_004107421.1 CDS Rpdx1_1062 NC_014834.1 1135503 1136270 R PFAM: protein of unknown function DUF81; KEGG: met:M446_6144 hypothetical protein; hypothetical protein complement(1135503..1136270) Rhodopseudomonas palustris DX-1 10063260 YP_004107422.1 CDS Rpdx1_1063 NC_014834.1 1136303 1136734 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll2418 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(1136303..1136734) Rhodopseudomonas palustris DX-1 10063261 YP_004107423.1 CDS Rpdx1_1064 NC_014834.1 1136796 1137380 D PFAM: regulatory protein TetR; KEGG: mlo:mlr2419 transcriptional regulator; regulatory protein TetR 1136796..1137380 Rhodopseudomonas palustris DX-1 10063262 YP_004107424.1 CDS Rpdx1_1065 NC_014834.1 1137396 1138178 R KEGG: bja:blr7731 inositol monophosphatase family protein; TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; histidinol-phosphate phosphatase complement(1137396..1138178) Rhodopseudomonas palustris DX-1 10063263 YP_004107425.1 CDS Rpdx1_1066 NC_014834.1 1138296 1138418 R hypothetical protein complement(1138296..1138418) Rhodopseudomonas palustris DX-1 10063264 YP_004107426.1 CDS Rpdx1_1067 NC_014834.1 1138750 1139637 R PFAM: N-formylglutamate amidohydrolase; KEGG: bja:blr7730 hypothetical protein; N-formylglutamate amidohydrolase complement(1138750..1139637) Rhodopseudomonas palustris DX-1 10063265 YP_004107427.1 CDS Rpdx1_1068 NC_014834.1 1139946 1140305 D KEGG: nha:Nham_1143 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1139946..1140305 Rhodopseudomonas palustris DX-1 10063266 YP_004107428.1 CDS Rpdx1_1069 NC_014834.1 1140563 1141186 R PFAM: regulatory protein TetR; KEGG: rle:RL2982 TetR family transcriptional regulator; regulatory protein TetR complement(1140563..1141186) Rhodopseudomonas palustris DX-1 10063268 YP_004107429.1 CDS Rpdx1_1070 NC_014834.1 1141415 1141951 D PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: rce:RC1_3068 oxidoreductase with iron-sulfur subunit, putative; (2Fe-2S)-binding domain-containing protein 1141415..1141951 Rhodopseudomonas palustris DX-1 10063269 YP_004107430.1 CDS Rpdx1_1071 NC_014834.1 1141948 1143015 D PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rce:RC1_3069 xanthine dehydrogenase YagS FAD-binding subunit,putative; FAD-binding molybdopterin dehydrogenase protein 1141948..1143015 Rhodopseudomonas palustris DX-1 10063270 YP_004107431.1 CDS Rpdx1_1072 NC_014834.1 1142984 1145263 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rce:RC1_3070 xanthine dehydrogenase YagR molybdenum-binding subunit, putative; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 1142984..1145263 Rhodopseudomonas palustris DX-1 10063271 YP_004107432.1 CDS Rpdx1_1073 NC_014834.1 1145406 1145555 R KEGG: bbt:BBta_1649 hypothetical protein; hypothetical protein complement(1145406..1145555) Rhodopseudomonas palustris DX-1 10063272 YP_004107433.1 CDS Rpdx1_1074 NC_014834.1 1145705 1146304 R KEGG: bbt:BBta_1650 TrpR binding protein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavoprotein WrbA complement(1145705..1146304) Rhodopseudomonas palustris DX-1 10063273 YP_004107434.1 CDS Rpdx1_1075 NC_014834.1 1146470 1147168 R PFAM: Pirin domain protein; KEGG: bbt:BBta_1651 putative pirin family protein; Pirin domain-containing protein complement(1146470..1147168) Rhodopseudomonas palustris DX-1 10063274 YP_004107435.1 CDS Rpdx1_1076 NC_014834.1 1147300 1148223 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:bll7565 transcriptional regulatory protein; LysR family transcriptional regulator 1147300..1148223 Rhodopseudomonas palustris DX-1 10063275 YP_004107436.1 CDS Rpdx1_1077 NC_014834.1 1148238 1149071 R KEGG: bja:bll1491 hypothetical protein; hypothetical protein complement(1148238..1149071) Rhodopseudomonas palustris DX-1 10063276 YP_004107437.1 CDS Rpdx1_1078 NC_014834.1 1149207 1149860 D PFAM: protein of unknown function DUF179; KEGG: nha:Nham_3550 hypothetical protein; hypothetical protein 1149207..1149860 Rhodopseudomonas palustris DX-1 10063277 YP_004107438.1 CDS Rpdx1_1079 NC_014834.1 1150050 1152929 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; Diverse 7TM receptor transmembrane region; Diverse 7TM receptor extracellular region 2; PAS fold-3 domain protein; GGDEF domain containing protein; KEGG: bja:bll1502 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase complement(1150050..1152929) Rhodopseudomonas palustris DX-1 10063278 YP_004107439.1 CDS Rpdx1_1080 NC_014834.1 1153051 1154049 R KEGG: bra:BRADO1103 putative NADPH quinone oxidoreductase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; NAD(P)H quinone oxidoreductase complement(1153051..1154049) Rhodopseudomonas palustris DX-1 10063279 YP_004107440.1 CDS Rpdx1_1081 NC_014834.1 1154162 1154353 D PFAM: protein of unknown function DUF1192; KEGG: bja:bsr1504 hypothetical protein; hypothetical protein 1154162..1154353 Rhodopseudomonas palustris DX-1 10063280 YP_004107441.1 CDS Rpdx1_1082 NC_014834.1 1154772 1155281 D PFAM: protein of unknown function DUF1465; KEGG: bra:BRADO1105 hypothetical protein; hypothetical protein 1154772..1155281 Rhodopseudomonas palustris DX-1 10063281 YP_004107442.1 CDS Rpdx1_1083 NC_014834.1 1155484 1155711 R KEGG: bbt:BBta_6943 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(1155484..1155711) Rhodopseudomonas palustris DX-1 10063282 YP_004107443.1 CDS Rpdx1_1084 NC_014834.1 1155910 1157814 D TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: nwi:Nwi_2746 ABC transporter, ATP-binding/permease protein; SMART: AAA ATPase; lipid A ABC exporter family, fused ATPase and inner membrane subunits 1155910..1157814 Rhodopseudomonas palustris DX-1 10063283 YP_004107444.1 CDS Rpdx1_1085 NC_014834.1 1157823 1158116 R PFAM: plasmid stabilization system; KEGG: rle:pRL70123 putative stabilisation protein; plasmid stabilization system complement(1157823..1158116) Rhodopseudomonas palustris DX-1 10063284 YP_004107445.1 CDS Rpdx1_1086 NC_014834.1 1158113 1158340 R KEGG: mea:Mex_1p4309 hypothetical protein; hypothetical protein complement(1158113..1158340) Rhodopseudomonas palustris DX-1 10063285 YP_004107446.1 CDS Rpdx1_1087 NC_014834.1 1158378 1158839 R PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_3543 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1158378..1158839) Rhodopseudomonas palustris DX-1 10063286 YP_004107447.1 CDS Rpdx1_1088 NC_014834.1 1158917 1159942 R PFAM: OmpA/MotB domain protein; KEGG: bja:bll1510 hypothetical protein; OmpA/MotB domain-containing protein complement(1158917..1159942) Rhodopseudomonas palustris DX-1 10063287 YP_004107448.1 CDS Rpdx1_1089 NC_014834.1 1159942 1160940 R KEGG: bja:bll1511 hypothetical protein; hypothetical protein complement(1159942..1160940) Rhodopseudomonas palustris DX-1 10063288 YP_004107449.1 CDS Rpdx1_1090 NC_014834.1 1161122 1161949 D PFAM: protein of unknown function DUF1295; KEGG: bbt:BBta_6937 hypothetical protein; hypothetical protein 1161122..1161949 Rhodopseudomonas palustris DX-1 10063289 YP_004107450.1 CDS Rpdx1_1091 NC_014834.1 1161946 1162971 D PFAM: Methyltransferase type 11; KEGG: bra:BRADO1113 putative cyclopropane-fatty-acyl-phospholipid synthase; type 11 methyltransferase 1161946..1162971 Rhodopseudomonas palustris DX-1 10063290 YP_004107451.1 CDS Rpdx1_1092 NC_014834.1 1163252 1163443 D KEGG: hha:Hhal_2261 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; hypothetical protein 1163252..1163443 Rhodopseudomonas palustris DX-1 10063291 YP_004107452.1 CDS Rpdx1_1093 NC_014834.1 1163531 1163731 D KEGG: fre:Franean1_5996 hypothetical protein; hypothetical protein 1163531..1163731 Rhodopseudomonas palustris DX-1 10063292 YP_004107453.1 CDS Rpdx1_1094 NC_014834.1 1163818 1164027 R KEGG: xau:Xaut_0314 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator complement(1163818..1164027) Rhodopseudomonas palustris DX-1 10063293 YP_004107454.1 CDS Rpdx1_1095 NC_014834.1 1164031 1164609 R KEGG: xau:Xaut_0315 hypothetical protein; hypothetical protein complement(1164031..1164609) Rhodopseudomonas palustris DX-1 10063294 YP_004107455.1 CDS Rpdx1_1096 NC_014834.1 1164688 1165266 D KEGG: mno:Mnod_0507 hypothetical protein; hypothetical protein 1164688..1165266 Rhodopseudomonas palustris DX-1 10063295 YP_004107456.1 CDS Rpdx1_1097 NC_014834.1 1165485 1166087 R KEGG: bja:blr7630 decarboxylase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(1165485..1166087) Rhodopseudomonas palustris DX-1 10063296 YP_004107457.1 CDS Rpdx1_1098 NC_014834.1 1166084 1167622 R KEGG: bja:blr7629 hypothetical protein; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase complement(1166084..1167622) Rhodopseudomonas palustris DX-1 10063297 YP_004107458.1 CDS Rpdx1_1099 NC_014834.1 1167774 1168283 D KEGG: oca:OCAR_5036 sterol binding protein; sterol-binding protein 1167774..1168283 Rhodopseudomonas palustris DX-1 10063298 YP_004107459.1 CDS Rpdx1_1100 NC_014834.1 1168287 1169264 D PFAM: peptidase U32; KEGG: oca:OCAR_5037 peptidase U32; peptidase U32 1168287..1169264 Rhodopseudomonas palustris DX-1 10063299 YP_004107460.1 CDS Rpdx1_1101 NC_014834.1 1169333 1170253 D PFAM: peptidase U32; KEGG: oca:OCAR_5038 peptidase U32; peptidase U32 1169333..1170253 Rhodopseudomonas palustris DX-1 10063300 YP_004107461.1 CDS Rpdx1_1102 NC_014834.1 1170618 1171406 R PFAM: inositol monophosphatase; KEGG: oca:OCAR_7316 inositol-1-monophosphatase (IMPase); inositol monophosphatase complement(1170618..1171406) Rhodopseudomonas palustris DX-1 10063301 YP_004107462.1 CDS Rpdx1_1103 NC_014834.1 1171510 1172604 R KEGG: nha:Nham_3536 Sel1; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein complement(1171510..1172604) Rhodopseudomonas palustris DX-1 10063302 YP_004107463.1 CDS Rpdx1_1104 NC_014834.1 1172621 1173280 R PFAM: thiamine monophosphate synthase; KEGG: nha:Nham_3535 thiamine monophosphate synthase; thiamine monophosphate synthase complement(1172621..1173280) Rhodopseudomonas palustris DX-1 10063303 YP_004107464.1 CDS Rpdx1_1105 NC_014834.1 1173286 1174320 R KEGG: oca:OCAR_7313 fructose-bisphosphate aldolase class-I; PFAM: fructose-bisphosphate aldolase class-I; fructose-bisphosphate aldolase complement(1173286..1174320) Rhodopseudomonas palustris DX-1 10063304 YP_004107465.1 CDS Rpdx1_1106 NC_014834.1 1174942 1176138 R KEGG: nwi:Nwi_2736 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; phosphoglycerate kinase complement(1174942..1176138) Rhodopseudomonas palustris DX-1 10063305 YP_004107466.1 CDS Rpdx1_1107 NC_014834.1 1176311 1177318 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bra:BRADO1124 glyceraldehyde-3-phosphate dehydrogenase (GAPDH); PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase complement(1176311..1177318) Rhodopseudomonas palustris DX-1 10063306 YP_004107467.1 CDS Rpdx1_1108 NC_014834.1 1177533 1179518 R KEGG: nwi:Nwi_2734 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; transketolase complement(1177533..1179518) Rhodopseudomonas palustris DX-1 10063307 YP_004107468.1 CDS Rpdx1_1109 NC_014834.1 1179843 1180187 D KEGG: nha:Nham_3530 hypothetical protein; hypothetical protein 1179843..1180187 Rhodopseudomonas palustris DX-1 10063308 YP_004107469.1 CDS Rpdx1_1110 NC_014834.1 1180184 1180594 D PFAM: protein of unknown function DUF710; KEGG: bbt:BBta_6921 cell division protein ZapA; hypothetical protein 1180184..1180594 Rhodopseudomonas palustris DX-1 10063309 YP_004107470.1 CDS Rpdx1_1111 NC_014834.1 1180949 1182190 R PFAM: (Uracil-5)-methyltransferase; KEGG: bra:BRADO2158 putative RNA methyltransferase; (uracil-5)-methyltransferase complement(1180949..1182190) Rhodopseudomonas palustris DX-1 10063310 YP_004107471.1 CDS Rpdx1_1112 NC_014834.1 1182237 1183661 R KEGG: bja:bll0821 multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(1182237..1183661) Rhodopseudomonas palustris DX-1 10063311 YP_004107472.1 CDS Rpdx1_1113 NC_014834.1 1183717 1184457 R KEGG: nha:Nham_0777 hemolysin A; TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; hemolysin A complement(1183717..1184457) Rhodopseudomonas palustris DX-1 10063312 YP_004107473.1 CDS Rpdx1_1114 NC_014834.1 1184461 1185030 R PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: bbt:BBta_2478 putative nucleoside 2-deoxyribosyltransferase; nucleoside 2-deoxyribosyltransferase complement(1184461..1185030) Rhodopseudomonas palustris DX-1 10063313 YP_004107474.1 CDS Rpdx1_1115 NC_014834.1 1185209 1187134 R KEGG: nha:Nham_0778 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; deoxyxylulose-5-phosphate synthase complement(1185209..1187134) Rhodopseudomonas palustris DX-1 10063314 YP_004107475.1 CDS Rpdx1_1116 NC_014834.1 1187546 1187797 R KEGG: nha:Nham_0779 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(1187546..1187797) Rhodopseudomonas palustris DX-1 10063315 YP_004107476.1 CDS Rpdx1_1117 NC_014834.1 1187879 1188808 R PFAM: histone deacetylase superfamily; KEGG: bja:bll2653 hypothetical protein; histone deacetylase superfamily protein complement(1187879..1188808) Rhodopseudomonas palustris DX-1 10063316 YP_004107477.1 CDS Rpdx1_1118 NC_014834.1 1188921 1190603 R PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: bja:bll2654 putative 5'-nucleotidase family protein; 5'-nucleotidase domain-containing protein complement(1188921..1190603) Rhodopseudomonas palustris DX-1 10063317 YP_004107478.1 CDS Rpdx1_1119 NC_014834.1 1190828 1191304 D KEGG: bra:BRADO3396 putative signal peptide; hypothetical protein 1190828..1191304 Rhodopseudomonas palustris DX-1 10063318 YP_004107479.1 CDS Rpdx1_1120 NC_014834.1 1191816 1193519 D TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: nha:Nham_2994 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 1191816..1193519 Rhodopseudomonas palustris DX-1 10063319 YP_004107480.1 CDS Rpdx1_1121 NC_014834.1 1193530 1195602 D KEGG: nha:Nham_2993 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; K+-transporting ATPase subunit B 1193530..1195602 Rhodopseudomonas palustris DX-1 10063320 YP_004107481.1 CDS Rpdx1_1122 NC_014834.1 1195616 1196218 D TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: nha:Nham_2992 potassium-transporting ATPase subunit C; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 1195616..1196218 Rhodopseudomonas palustris DX-1 10063321 YP_004107482.1 CDS Rpdx1_1123 NC_014834.1 1196234 1198924 D KEGG: nha:Nham_2991 osmosensitive K+ channel signal transduction histidine kinase; PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; osmosensitive K channel signal transduction histidine kinase 1196234..1198924 Rhodopseudomonas palustris DX-1 10063322 YP_004107483.1 CDS Rpdx1_1124 NC_014834.1 1198921 1199625 D KEGG: nha:Nham_2990 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 1198921..1199625 Rhodopseudomonas palustris DX-1 10063323 YP_004107484.1 CDS Rpdx1_1125 NC_014834.1 1199756 1200517 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nha:Nham_0781 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(1199756..1200517) Rhodopseudomonas palustris DX-1 10063324 YP_004107485.1 CDS Rpdx1_1126 NC_014834.1 1200581 1202362 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_2498 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(1200581..1202362) Rhodopseudomonas palustris DX-1 10063325 YP_004107486.1 CDS Rpdx1_1127 NC_014834.1 1202765 1206313 R TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; KEGG: rle:pRL90293 putative UreA amidolyase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase complement(1202765..1206313) Rhodopseudomonas palustris DX-1 10063327 YP_004107487.1 CDS Rpdx1_1128 NC_014834.1 1206316 1206951 R KEGG: rlg:Rleg_6106 UreA carboxylase-associated protein 1; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989; urea carboxylase-associated protein 1 complement(1206316..1206951) Rhodopseudomonas palustris DX-1 10063328 YP_004107488.1 CDS Rpdx1_1129 NC_014834.1 1206954 1207793 R KEGG: xau:Xaut_1224 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989; urea carboxylase-associated protein 2 complement(1206954..1207793) Rhodopseudomonas palustris DX-1 10063329 YP_004107489.1 CDS Rpdx1_1130 NC_014834.1 1207832 1208623 R KEGG: azc:AZC_4399 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1207832..1208623) Rhodopseudomonas palustris DX-1 10063330 YP_004107490.1 CDS Rpdx1_1131 NC_014834.1 1208620 1209438 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1226 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(1208620..1209438) Rhodopseudomonas palustris DX-1 10063331 YP_004107491.1 CDS Rpdx1_1132 NC_014834.1 1209474 1210544 R KEGG: xau:Xaut_1227 NlpA lipoprotein; TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; PFAM: NLPA lipoprotein; ABC transporter substrate-binding protein complement(1209474..1210544) Rhodopseudomonas palustris DX-1 10063332 YP_004107492.1 CDS Rpdx1_1133 NC_014834.1 1210946 1213333 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bja:blr5269 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver; PAS/PAC sensor hybrid histidine kinase 1210946..1213333 Rhodopseudomonas palustris DX-1 10063333 YP_004107493.1 CDS Rpdx1_1134 NC_014834.1 1213358 1214152 R TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bja:blr1071 transcriptional regulatory protein; SMART: regulatory protein IclR; IclR family transcriptional regulator complement(1213358..1214152) Rhodopseudomonas palustris DX-1 10063334 YP_004107494.1 CDS Rpdx1_1135 NC_014834.1 1214514 1215872 D PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:bll1070 dioxygenase; Rieske (2Fe-2S) iron-sulfur domain 1214514..1215872 Rhodopseudomonas palustris DX-1 10063335 YP_004107495.1 CDS Rpdx1_1136 NC_014834.1 1215869 1217329 D PFAM: glutamine synthetase catalytic region; KEGG: mno:Mnod_8463 glutamine synthetase catalytic region; glutamine synthetase 1215869..1217329 Rhodopseudomonas palustris DX-1 10063336 YP_004107496.1 CDS Rpdx1_1137 NC_014834.1 1217378 1218553 D PFAM: Extracellular ligand-binding receptor; KEGG: bov:BOV_A0610 amino acid ABC transporter, periplasmic amino-acid binding protein; extracellular ligand-binding receptor 1217378..1218553 Rhodopseudomonas palustris DX-1 10063337 YP_004107497.1 CDS Rpdx1_1138 NC_014834.1 1218933 1219799 D PFAM: inner-membrane translocator; KEGG: bmr:BMI_II646 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 1218933..1219799 Rhodopseudomonas palustris DX-1 10063338 YP_004107498.1 CDS Rpdx1_1139 NC_014834.1 1219801 1220799 D PFAM: inner-membrane translocator; KEGG: ara:Arad_9508 branched-chain amino acid ABC transporter; inner-membrane translocator 1219801..1220799 Rhodopseudomonas palustris DX-1 10063339 YP_004107499.1 CDS Rpdx1_1140 NC_014834.1 1220796 1221560 D KEGG: azl:AZL_d00570 branched-chain amino acid transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1220796..1221560 Rhodopseudomonas palustris DX-1 10063340 YP_004107500.1 CDS Rpdx1_1141 NC_014834.1 1221541 1222254 D KEGG: rec:RHECIAT_CH0003687 probable branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1221541..1222254 Rhodopseudomonas palustris DX-1 10063341 YP_004107501.1 CDS Rpdx1_1142 NC_014834.1 1222276 1224813 R KEGG: atc:AGR_C_3927 hypothetical protein; PFAM: PAS fold-2 domain protein; GAF domain protein; Phytochrome central region domain protein; HWE histidine kinase; response regulator receiver; SMART: GAF domain protein; response regulator receiver; putative PAS/PAC sensor protein complement(1222276..1224813) Rhodopseudomonas palustris DX-1 10063342 YP_004107502.1 CDS Rpdx1_1143 NC_014834.1 1225077 1225820 D SMART: regulatory protein Crp; KEGG: bja:blr0536 transcriptional regulatory protein; putative Crp/Fnr family transcriptional regulator 1225077..1225820 Rhodopseudomonas palustris DX-1 10063343 YP_004107503.1 CDS Rpdx1_1144 NC_014834.1 1225875 1226606 R PFAM: cyclic nucleotide-binding; KEGG: bbt:BBta_6056 Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator complement(1225875..1226606) Rhodopseudomonas palustris DX-1 10063344 YP_004107504.1 CDS Rpdx1_1145 NC_014834.1 1226780 1227349 D PFAM: Phosphoglycerate mutase; KEGG: bja:bll327 cobalamin synthesis protein; phosphoglycerate mutase 1226780..1227349 Rhodopseudomonas palustris DX-1 10063345 YP_004107505.1 CDS Rpdx1_1146 NC_014834.1 1227794 1228129 D KEGG: rsq:Rsph17025_3448 hypothetical protein; hypothetical protein 1227794..1228129 Rhodopseudomonas palustris DX-1 10063346 YP_004107506.1 CDS Rpdx1_1147 NC_014834.1 1228195 1229340 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pla:Plav_0463 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein complement(1228195..1229340) Rhodopseudomonas palustris DX-1 10063347 YP_004107507.1 CDS Rpdx1_1148 NC_014834.1 1229505 1229948 R KEGG: bbt:BBta_7584 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(1229505..1229948) Rhodopseudomonas palustris DX-1 10063348 YP_004107508.1 CDS Rpdx1_1149 NC_014834.1 1230107 1231291 D KEGG: bja:bll0199 nitrile hydratase regulator; nitrile hydratase regulator 1230107..1231291 Rhodopseudomonas palustris DX-1 10063349 YP_004107509.1 CDS Rpdx1_1150 NC_014834.1 1231455 1232969 D PFAM: Amidase; KEGG: bja:bll0198 amidase; amidase 1231455..1232969 Rhodopseudomonas palustris DX-1 10063350 YP_004107510.1 CDS Rpdx1_1151 NC_014834.1 1233005 1233862 D PFAM: inner-membrane translocator; KEGG: bja:bll0197 ABC transporter permease protein; inner-membrane translocator 1233005..1233862 Rhodopseudomonas palustris DX-1 10063351 YP_004107511.1 CDS Rpdx1_1152 NC_014834.1 1233867 1235090 D PFAM: Extracellular ligand-binding receptor; KEGG: bja:bll0196 ABC transporter substrate-binding protein; extracellular ligand-binding receptor 1233867..1235090 Rhodopseudomonas palustris DX-1 10063352 YP_004107512.1 CDS Rpdx1_1153 NC_014834.1 1235407 1236399 D PFAM: inner-membrane translocator; KEGG: bja:bll0195 ABC transporter permease protein; inner-membrane translocator 1235407..1236399 Rhodopseudomonas palustris DX-1 10063353 YP_004107513.1 CDS Rpdx1_1154 NC_014834.1 1236386 1237120 D KEGG: bja:bll0194 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1236386..1237120 Rhodopseudomonas palustris DX-1 10063354 YP_004107514.1 CDS Rpdx1_1155 NC_014834.1 1237113 1237814 D KEGG: bja:bll0193 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1237113..1237814 Rhodopseudomonas palustris DX-1 10063355 YP_004107515.1 CDS Rpdx1_1156 NC_014834.1 1237934 1238803 R PFAM: alpha/beta hydrolase fold; KEGG: bja:bll2527 putative hydrolase; alpha/beta hydrolase fold protein complement(1237934..1238803) Rhodopseudomonas palustris DX-1 10063356 YP_004107516.1 CDS Rpdx1_1157 NC_014834.1 1239034 1239462 D KEGG: mdi:METDI0764 transcriptional regulator, ArsR family; putative SoxR protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 1239034..1239462 Rhodopseudomonas palustris DX-1 10063357 YP_004107517.1 CDS Rpdx1_1158 NC_014834.1 1239476 1239850 R KEGG: rme:Rmet_2371 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein complement(1239476..1239850) Rhodopseudomonas palustris DX-1 10063358 YP_004107518.1 CDS Rpdx1_1159 NC_014834.1 1239904 1241031 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pyridine nucleotide-disulfide oxidoreductase family protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1239904..1241031) Rhodopseudomonas palustris DX-1 10063359 YP_004107519.1 CDS Rpdx1_1160 NC_014834.1 1241226 1241840 D PFAM: Methyltransferase type 12; KEGG: tbd:Tbd_2330 hypothetical protein; type 12 methyltransferase 1241226..1241840 Rhodopseudomonas palustris DX-1 10063360 YP_004107520.1 CDS Rpdx1_1161 NC_014834.1 1241848 1242243 R KEGG: azl:AZL_007750 nitrogenase-associated protein; TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; nitrogenase-associated protein complement(1241848..1242243) Rhodopseudomonas palustris DX-1 10063361 YP_004107521.1 CDS Rpdx1_1162 NC_014834.1 1242255 1242845 R PFAM: Protein of unknown function DUF2478; KEGG: bja:blr6953 molybdenum ABC transporter ATP-binding protein; hypothetical protein complement(1242255..1242845) Rhodopseudomonas palustris DX-1 10063362 YP_004107522.1 CDS Rpdx1_1163 NC_014834.1 1243092 1243934 D KEGG: bja:bll6950 putative pyrophosphorylase; TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; modD protein 1243092..1243934 Rhodopseudomonas palustris DX-1 10063363 YP_004107523.1 CDS Rpdx1_1164 NC_014834.1 1243883 1244143 R KEGG: der:Dere_GG20400 GG20400 gene product from transcript GG20400-RA; hypothetical protein complement(1243883..1244143) Rhodopseudomonas palustris DX-1 10063364 YP_004107524.1 CDS Rpdx1_1165 NC_014834.1 1244188 1245822 R PFAM: AMP-dependent synthetase and ligase; KEGG: xau:Xaut_4075 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(1244188..1245822) Rhodopseudomonas palustris DX-1 10063365 YP_004107525.1 CDS Rpdx1_1166 NC_014834.1 1246067 1246273 D KEGG: bra:BRADO2820 hypothetical protein; hypothetical protein 1246067..1246273 Rhodopseudomonas palustris DX-1 10063366 YP_004107526.1 CDS Rpdx1_1167 NC_014834.1 1246391 1247011 D PFAM: NUDIX hydrolase; KEGG: bja:bll6630 hypothetical protein; NUDIX hydrolase 1246391..1247011 Rhodopseudomonas palustris DX-1 10063367 YP_004107527.1 CDS Rpdx1_1168 NC_014834.1 1247149 1247523 D PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: bbt:BBta_2733 protocatechuate 4,5-dioxygenase subunit alpha; extradiol ring-cleavage dioxygenase LigAB LigA subunit 1247149..1247523 Rhodopseudomonas palustris DX-1 10063368 YP_004107528.1 CDS Rpdx1_1169 NC_014834.1 1247536 1248393 D PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bbt:BBta_2734 protocatechuate 4,5-dioxygenase subunit beta; extradiol ring-cleavage dioxygenase class III protein subunit B 1247536..1248393 Rhodopseudomonas palustris DX-1 10063369 YP_004107529.1 CDS Rpdx1_1170 NC_014834.1 1248607 1249794 D PFAM: cytochrome P450; KEGG: bra:BRADO2350 putative cytochrome P450; cytochrome P450 1248607..1249794 Rhodopseudomonas palustris DX-1 10063370 YP_004107530.1 CDS Rpdx1_1171 NC_014834.1 1249798 1250091 R KEGG: bra:BRADO5343 hypothetical protein; hypothetical protein complement(1249798..1250091) Rhodopseudomonas palustris DX-1 10063371 YP_004107531.1 CDS Rpdx1_1172 NC_014834.1 1250332 1251096 D PFAM: protein of unknown function DUF81; KEGG: mlo:mll3907 putative integral membrane protein; hypothetical protein 1250332..1251096 Rhodopseudomonas palustris DX-1 10063372 YP_004107532.1 CDS Rpdx1_1173 NC_014834.1 1251117 1252559 R TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: bra:BRADO3206 nitrogen fixation protein FixG; cytochrome c oxidase accessory protein CcoG complement(1251117..1252559) Rhodopseudomonas palustris DX-1 10063373 YP_004107533.1 CDS Rpdx1_1174 NC_014834.1 1252678 1252878 R KEGG: bja:bsr3073 hypothetical protein; hypothetical protein complement(1252678..1252878) Rhodopseudomonas palustris DX-1 10063374 YP_004107534.1 CDS Rpdx1_1175 NC_014834.1 1253178 1253858 D PFAM: transcriptional regulator PadR family protein; KEGG: xau:Xaut_0164 PadR-like family transcriptional regulator; PadR-like family transcriptional regulator 1253178..1253858 Rhodopseudomonas palustris DX-1 10063375 YP_004107535.1 CDS Rpdx1_1176 NC_014834.1 1253855 1254388 D KEGG: bbt:BBta_p0097 ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1253855..1254388 Rhodopseudomonas palustris DX-1 10063376 YP_004107536.1 CDS Rpdx1_1177 NC_014834.1 1254563 1254955 D KEGG: rsq:Rsph17025_1840 hypothetical protein; hypothetical protein 1254563..1254955 Rhodopseudomonas palustris DX-1 10063377 YP_004107537.1 CDS Rpdx1_1178 NC_014834.1 1255173 1255376 R KEGG: bra:BRADO4593 hypothetical protein; hypothetical protein complement(1255173..1255376) Rhodopseudomonas palustris DX-1 10063378 YP_004107538.1 CDS Rpdx1_1179 NC_014834.1 1255490 1255810 D KEGG: bja:bll5773 transcriptional regulatory protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 1255490..1255810 Rhodopseudomonas palustris DX-1 10063379 YP_004107539.1 CDS Rpdx1_1180 NC_014834.1 1255812 1256810 D KEGG: bbt:BBta_3720 RND family efflux pump membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1255812..1256810 Rhodopseudomonas palustris DX-1 10063380 YP_004107540.1 CDS Rpdx1_1181 NC_014834.1 1256807 1260031 D PFAM: acriflavin resistance protein; KEGG: bja:bll5771 AcrB/AcrD/AcrF family cation efflux protein; acriflavin resistance protein 1256807..1260031 Rhodopseudomonas palustris DX-1 10063381 YP_004107541.1 CDS Rpdx1_1182 NC_014834.1 1260106 1260759 D PFAM: DSBA oxidoreductase; KEGG: bja:blr1349 hypothetical protein; DSBA oxidoreductase 1260106..1260759 Rhodopseudomonas palustris DX-1 10063382 YP_004107542.1 CDS Rpdx1_1183 NC_014834.1 1260925 1261236 D KEGG: app:CAP2UW1_2673 hypothetical protein; hypothetical protein 1260925..1261236 Rhodopseudomonas palustris DX-1 10063383 YP_004107543.1 CDS Rpdx1_1184 NC_014834.1 1261241 1262506 D PFAM: Ferric reductase domain protein transmembrane component domain; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: app:CAP2UW1_2674 ferric reductase domain protein protein transmembrane component domain protein; ferric reductase domain-containing transmembrane protein 1261241..1262506 Rhodopseudomonas palustris DX-1 10063384 YP_004107544.1 CDS Rpdx1_1185 NC_014834.1 1262503 1262865 D PFAM: cytochrome b5; KEGG: app:CAP2UW1_2675 cytochrome b5; cytochrome b5 1262503..1262865 Rhodopseudomonas palustris DX-1 10063385 YP_004107545.1 CDS Rpdx1_1186 NC_014834.1 1262967 1264097 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: nha:Nham_3225 DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein complement(1262967..1264097) Rhodopseudomonas palustris DX-1 10063386 YP_004107546.1 CDS Rpdx1_1187 NC_014834.1 1264471 1265391 D PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: nwi:Nwi_2602 hypothetical protein; hypothetical protein 1264471..1265391 Rhodopseudomonas palustris DX-1 10063387 YP_004107547.1 CDS Rpdx1_1188 NC_014834.1 1265529 1266077 D KEGG: bja:blr2511 molybdopterin biosynthesis protein B; TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor biosynthesis protein B 1265529..1266077 Rhodopseudomonas palustris DX-1 10063388 YP_004107548.1 CDS Rpdx1_1189 NC_014834.1 1266190 1267008 D PFAM: coenzyme A transferase; KEGG: bja:bll1293 glutaconate CoA-transferase subunit A; coenzyme A transferase 1266190..1267008 Rhodopseudomonas palustris DX-1 10063389 YP_004107549.1 CDS Rpdx1_1190 NC_014834.1 1267005 1267757 D PFAM: coenzyme A transferase; KEGG: bja:bll1292 hypothetical protein; coenzyme A transferase 1267005..1267757 Rhodopseudomonas palustris DX-1 10063390 YP_004107550.1 CDS Rpdx1_1191 NC_014834.1 1267807 1269156 R PFAM: amino acid permease-associated region; KEGG: pmy:Pmen_3544 amino acid permease-associated region; amino acid permease complement(1267807..1269156) Rhodopseudomonas palustris DX-1 10063391 YP_004107551.1 CDS Rpdx1_1192 NC_014834.1 1269210 1269986 R PFAM: putative RNA methylase; KEGG: rce:RC1_1514 hypothetical protein; putative RNA methylase complement(1269210..1269986) Rhodopseudomonas palustris DX-1 10063392 YP_004107552.1 CDS Rpdx1_1193 NC_014834.1 1270099 1270251 R KEGG: ani:AN6720.2 hypothetical protein; hypothetical protein complement(1270099..1270251) Rhodopseudomonas palustris DX-1 10063393 YP_004107553.1 CDS Rpdx1_1194 NC_014834.1 1270251 1271192 R KEGG: bja:bll2512 transcriptional regulatory protein; PFAM: regulatory protein MarR; GCN5-related N-acetyltransferase; SMART: regulatory protein MarR; MarR family transcriptional regulator with acetyltransferase activity complement(1270251..1271192) Rhodopseudomonas palustris DX-1 10063394 YP_004107554.1 CDS Rpdx1_1195 NC_014834.1 1271357 1271923 R PFAM: glycosyl transferase family 2; KEGG: bja:bll2513 hypothetical protein; glycosyl transferase family 2 protein complement(1271357..1271923) Rhodopseudomonas palustris DX-1 10063395 YP_004107555.1 CDS Rpdx1_1196 NC_014834.1 1272106 1273266 D KEGG: bja:blr2519 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1272106..1273266 Rhodopseudomonas palustris DX-1 10063396 YP_004107556.1 CDS Rpdx1_1197 NC_014834.1 1273361 1274260 D KEGG: bbt:BBta_2343 ribonuclease HII; PFAM: ribonuclease HII/HIII; ribonuclease H 1273361..1274260 Rhodopseudomonas palustris DX-1 10063397 YP_004107557.1 CDS Rpdx1_1198 NC_014834.1 1274331 1275839 D KEGG: nha:Nham_3220 hypothetical protein; hypothetical protein 1274331..1275839 Rhodopseudomonas palustris DX-1 10063398 YP_004107558.1 CDS Rpdx1_1199 NC_014834.1 1275877 1278126 R KEGG: azc:AZC_1729 TonB-dependent siderophore receptor precursor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor complement(1275877..1278126) Rhodopseudomonas palustris DX-1 10063399 YP_004107559.1 CDS Rpdx1_1200 NC_014834.1 1278582 1279409 R KEGG: bra:BRADO2019 putative DNA polymerases; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-like protein complement(1278582..1279409) Rhodopseudomonas palustris DX-1 10063400 YP_004107560.1 CDS Rpdx1_1201 NC_014834.1 1279612 1281270 D KEGG: bra:BRADO2020 putative electron transfer flavoprotein dehydrogenases; PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; electron-transferring-flavoprotein dehydrogenase 1279612..1281270 Rhodopseudomonas palustris DX-1 10063401 YP_004107561.1 CDS Rpdx1_1202 NC_014834.1 1281359 1283344 D PFAM: TPR repeat-containing protein; KEGG: bja:blr2525 hypothetical protein; hypothetical protein 1281359..1283344 Rhodopseudomonas palustris DX-1 10063402 YP_004107562.1 CDS Rpdx1_1203 NC_014834.1 1283461 1284360 D TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: nha:Nham_3216 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1283461..1284360 Rhodopseudomonas palustris DX-1 10063403 YP_004107563.1 CDS Rpdx1_1204 NC_014834.1 1284502 1285512 R PFAM: Polyprenyl synthetase; KEGG: bbt:BBta_2349 octaprenyl diphosphate synthase; polyprenyl synthetase complement(1284502..1285512) Rhodopseudomonas palustris DX-1 10063404 YP_004107564.1 CDS Rpdx1_1205 NC_014834.1 1285720 1285947 D PFAM: Protein of unknown function DUF2007; KEGG: nwi:Nwi_2591 hypothetical protein; hypothetical protein 1285720..1285947 Rhodopseudomonas palustris DX-1 10063405 YP_004107565.1 CDS Rpdx1_1206 NC_014834.1 1285940 1286719 D PFAM: methyltransferase small; KEGG: bra:BRADO2025 hypothetical protein; methyltransferase small 1285940..1286719 Rhodopseudomonas palustris DX-1 10063406 YP_004107566.1 CDS Rpdx1_1207 NC_014834.1 1286767 1286868 R KEGG: bra:BRADO2026 hypothetical protein; hypothetical protein complement(1286767..1286868) Rhodopseudomonas palustris DX-1 10063407 YP_004107567.1 CDS Rpdx1_1208 NC_014834.1 1286983 1287885 D PFAM: peptidase S49; KEGG: bja:blr2534 proteinase; peptidase S49 1286983..1287885 Rhodopseudomonas palustris DX-1 10063408 YP_004107568.1 CDS Rpdx1_1209 NC_014834.1 1288003 1288191 D KEGG: bbt:BBta_2354 hypothetical protein; hypothetical protein 1288003..1288191 Rhodopseudomonas palustris DX-1 10063409 YP_004107569.1 CDS Rpdx1_1210 NC_014834.1 1288388 1289323 D TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: nwi:Nwi_2587 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit; glycyl-tRNA synthetase subunit alpha 1288388..1289323 Rhodopseudomonas palustris DX-1 10063410 YP_004107570.1 CDS Rpdx1_1211 NC_014834.1 1289399 1289833 D manually curated; KEGG: bbt:BBta_2356 hypothetical protein; hypothetical protein 1289399..1289833 Rhodopseudomonas palustris DX-1 10063411 YP_004107571.1 CDS Rpdx1_1212 NC_014834.1 1289833 1292073 D TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: nwi:Nwi_2586 glycyl-tRNA synthetase subunit beta; glycyl-tRNA synthetase subunit beta 1289833..1292073 Rhodopseudomonas palustris DX-1 10063412 YP_004107572.1 CDS Rpdx1_1213 NC_014834.1 1292418 1293518 D KEGG: cak:Caul_3593 hypothetical protein; hypothetical protein 1292418..1293518 Rhodopseudomonas palustris DX-1 10063413 YP_004107573.1 CDS Rpdx1_1214 NC_014834.1 1293532 1294809 R KEGG: acr:Acry_0183 membrane protein-like protein; hypothetical protein complement(1293532..1294809) Rhodopseudomonas palustris DX-1 10063414 YP_004107574.1 CDS Rpdx1_1215 NC_014834.1 1295335 1295490 D KEGG: mpo:Mpop_3015 hypothetical protein; hypothetical protein 1295335..1295490 Rhodopseudomonas palustris DX-1 10063415 YP_004107575.1 CDS Rpdx1_1216 NC_014834.1 1295582 1298644 D TIGRFAM: pyruvate, phosphate dikinase; KEGG: bja:blr2538 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; pyruvate, phosphate dikinase 1295582..1298644 Rhodopseudomonas palustris DX-1 10063416 YP_004107576.1 CDS Rpdx1_1217 NC_014834.1 1298964 1300409 D PFAM: cell wall hydrolase SleB; KEGG: nha:Nham_3504 cell wall hydrolase, SleB; cell wall hydrolase SleB 1298964..1300409 Rhodopseudomonas palustris DX-1 10063417 YP_004107577.1 CDS Rpdx1_1218 NC_014834.1 1300597 1301472 R TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: bja:bll2540 nicotinate-mononucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(1300597..1301472) Rhodopseudomonas palustris DX-1 10063418 YP_004107578.1 CDS Rpdx1_1219 NC_014834.1 1301488 1303104 R KEGG: bja:bll2541 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase complement(1301488..1303104) Rhodopseudomonas palustris DX-1 10063419 YP_004107579.1 CDS Rpdx1_1220 NC_014834.1 1303198 1304310 R TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: oca:OCAR_6942 quinolinate synthetase; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A complement(1303198..1304310) Rhodopseudomonas palustris DX-1 10063420 YP_004107580.1 CDS Rpdx1_1221 NC_014834.1 1304664 1305650 D KEGG: nha:Nham_3502 alcohol dehydrogenase GroES-like protein; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; YhdH/YhfP family quinone oxidoreductase 1304664..1305650 Rhodopseudomonas palustris DX-1 10063421 YP_004107581.1 CDS Rpdx1_1222 NC_014834.1 1305765 1306337 D KEGG: nha:Nham_3501 hypothetical protein; hypothetical protein 1305765..1306337 Rhodopseudomonas palustris DX-1 10063422 YP_004107582.1 CDS Rpdx1_1223 NC_014834.1 1306363 1307733 R KEGG: pmy:Pmen_3748 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(1306363..1307733) Rhodopseudomonas palustris DX-1 10063423 YP_004107583.1 CDS Rpdx1_1224 NC_014834.1 1308089 1308838 D PFAM: Threonyl/alanyl tRNA synthetase SAD; Alanyl-tRNA synthetase, class IIc-like; KEGG: rso:RSc0988 hypothetical protein; threonyl/alanyl tRNA synthetase SAD 1308089..1308838 Rhodopseudomonas palustris DX-1 10063424 YP_004107584.1 CDS Rpdx1_1225 NC_014834.1 1308855 1311542 R PFAM: Protein of unknown function DUF2339, transmembrane; KEGG: bja:bll2549 hypothetical protein; hypothetical protein complement(1308855..1311542) Rhodopseudomonas palustris DX-1 10063425 YP_004107585.1 CDS Rpdx1_1227 NC_014834.1 1311808 1314678 R KEGG: nhl:Nhal_4024 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; helicase domain-containing protein complement(1311808..1314678) Rhodopseudomonas palustris DX-1 10063427 YP_004107586.1 CDS Rpdx1_1228 NC_014834.1 1314671 1315735 R KEGG: hsa:80324 pseudouridylate synthase 1; hypothetical protein complement(1314671..1315735) Rhodopseudomonas palustris DX-1 10063428 YP_004107587.1 CDS Rpdx1_1229 NC_014834.1 1315827 1316822 R KEGG: bja:bll2550 hypothetical protein; hypothetical protein complement(1315827..1316822) Rhodopseudomonas palustris DX-1 10063429 YP_004107588.1 CDS Rpdx1_1230 NC_014834.1 1316819 1317325 R KEGG: nha:Nham_4022 hypothetical protein; hypothetical protein complement(1316819..1317325) Rhodopseudomonas palustris DX-1 10063430 YP_004107589.1 CDS Rpdx1_1231 NC_014834.1 1317393 1318010 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: nha:Nham_4021 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(1317393..1318010) Rhodopseudomonas palustris DX-1 10063431 YP_004107590.1 CDS Rpdx1_1232 NC_014834.1 1318057 1318914 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nar:Saro_2477 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1318057..1318914) Rhodopseudomonas palustris DX-1 10063432 YP_004107591.1 CDS Rpdx1_1233 NC_014834.1 1319044 1320018 D PFAM: protein of unknown function DUF897; KEGG: jan:Jann_0109 hypothetical protein; hypothetical protein 1319044..1320018 Rhodopseudomonas palustris DX-1 10063433 YP_004107592.1 CDS Rpdx1_1234 NC_014834.1 1320047 1320682 R TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: bja:bll2553 3-methyladenine-DNA glycosylase; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(1320047..1320682) Rhodopseudomonas palustris DX-1 10063434 YP_004107593.1 CDS Rpdx1_1235 NC_014834.1 1320679 1321560 R KEGG: nwi:Nwi_2704 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; folate-binding protein YgfZ complement(1320679..1321560) Rhodopseudomonas palustris DX-1 10063435 YP_004107594.1 CDS Rpdx1_1236 NC_014834.1 1321708 1323042 D TIGRFAM: dihydroorotase, multifunctional complex type; KEGG: nha:Nham_4018 dihydroorotase; PFAM: amidohydrolase; multifunctional complex dihydroorotase 1321708..1323042 Rhodopseudomonas palustris DX-1 10063436 YP_004107595.1 CDS Rpdx1_1237 NC_014834.1 1323369 1323524 D KEGG: bra:BRADO5216 hypothetical protein; hypothetical protein 1323369..1323524 Rhodopseudomonas palustris DX-1 10063437 YP_004107596.1 CDS Rpdx1_1238 NC_014834.1 1323548 1323811 R KEGG: nha:Nham_4017 hypothetical protein; hypothetical protein complement(1323548..1323811) Rhodopseudomonas palustris DX-1 10063438 YP_004107597.1 CDS Rpdx1_1239 NC_014834.1 1323943 1324320 R PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_2701 hypothetical protein; hypothetical protein complement(1323943..1324320) Rhodopseudomonas palustris DX-1 10063439 YP_004107598.1 CDS Rpdx1_1240 NC_014834.1 1324380 1324823 R PFAM: NUDIX hydrolase; KEGG: bja:bll2562 GDP-mannose mannosyl hydrolase; NUDIX hydrolase complement(1324380..1324823) Rhodopseudomonas palustris DX-1 10063440 YP_004107599.1 CDS Rpdx1_1241 NC_014834.1 1324820 1325317 R KEGG: nha:Nham_4012 hypothetical protein; hypothetical protein complement(1324820..1325317) Rhodopseudomonas palustris DX-1 10063441 YP_004107600.1 CDS Rpdx1_1242 NC_014834.1 1325379 1326152 D PFAM: protein of unknown function DUF159; KEGG: bja:blr2564 hypothetical protein; hypothetical protein 1325379..1326152 Rhodopseudomonas palustris DX-1 10063442 YP_004107601.1 CDS Rpdx1_1243 NC_014834.1 1326165 1327592 R PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_2386 putative D-lactate ferricytochrome c oxidoreductase; FAD linked oxidase domain-containing protein complement(1326165..1327592) Rhodopseudomonas palustris DX-1 10063443 YP_004107602.1 CDS Rpdx1_1244 NC_014834.1 1327712 1328710 R KEGG: bja:bll2570 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; Sua5/YciO/YrdC/YwlC family protein complement(1327712..1328710) Rhodopseudomonas palustris DX-1 10063444 YP_004107603.1 CDS Rpdx1_1245 NC_014834.1 1328939 1329838 D KEGG: azc:AZC_3223 putative transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1328939..1329838 Rhodopseudomonas palustris DX-1 10063445 YP_004107604.1 CDS Rpdx1_1246 NC_014834.1 1329963 1331255 D PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_3224 putative 4-methylmuconolactone transporter; major facilitator superfamily protein 1329963..1331255 Rhodopseudomonas palustris DX-1 10063446 YP_004107605.1 CDS Rpdx1_1247 NC_014834.1 1331248 1332150 D PFAM: amidohydrolase 2; KEGG: azc:AZC_3225 putative 2-pyrone-4,6-dicarboxylate hydrolase; amidohydrolase 2 1331248..1332150 Rhodopseudomonas palustris DX-1 10063447 YP_004107606.1 CDS Rpdx1_1248 NC_014834.1 1332471 1333115 R KEGG: met:M446_2417 hypothetical protein; hypothetical protein complement(1332471..1333115) Rhodopseudomonas palustris DX-1 10063449 YP_004107607.1 CDS Rpdx1_1249 NC_014834.1 1333467 1334801 D PFAM: Curlin associated repeat protein; KEGG: ppw:PputW619_2955 curlin-associated protein; curlin associated repeat-containing protein 1333467..1334801 Rhodopseudomonas palustris DX-1 10063450 YP_004107608.1 CDS Rpdx1_1250 NC_014834.1 1334916 1335236 D KEGG: mes:Meso_0925 hypothetical protein; hypothetical protein 1334916..1335236 Rhodopseudomonas palustris DX-1 10063451 YP_004107609.1 CDS Rpdx1_1251 NC_014834.1 1335233 1335715 D KEGG: bur:Bcep18194_B2589 hypothetical protein; hypothetical protein 1335233..1335715 Rhodopseudomonas palustris DX-1 10063452 YP_004107610.1 CDS Rpdx1_1252 NC_014834.1 1335712 1336128 D PFAM: Curli production assembly/transport component CsgF; KEGG: mpo:Mpop_0031 hypothetical protein; curli production assembly/transport component CsgF 1335712..1336128 Rhodopseudomonas palustris DX-1 10063453 YP_004107611.1 CDS Rpdx1_1253 NC_014834.1 1336182 1337123 D PFAM: Curli production assembly/transport component CsgG; KEGG: met:M446_2419 curli production assembly/transport component CsgG; curli production assembly/transport component CsgG 1336182..1337123 Rhodopseudomonas palustris DX-1 10063454 YP_004107612.1 CDS Rpdx1_1254 NC_014834.1 1337126 1337908 D PFAM: Lytic transglycosylase catalytic; KEGG: met:M446_4519 lytic transglycosylase catalytic; lytic transglycosylase 1337126..1337908 Rhodopseudomonas palustris DX-1 10063455 YP_004107613.1 CDS Rpdx1_1255 NC_014834.1 1337925 1338239 R KEGG: mpo:Mpop_0037 hypothetical protein; hypothetical protein complement(1337925..1338239) Rhodopseudomonas palustris DX-1 10063456 YP_004107614.1 CDS Rpdx1_1256 NC_014834.1 1338486 1338746 D KEGG: xau:Xaut_1427 hypothetical protein; hypothetical protein 1338486..1338746 Rhodopseudomonas palustris DX-1 10063457 YP_004107615.1 CDS Rpdx1_1257 NC_014834.1 1338946 1339620 D KEGG: mag:amb3351 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 1338946..1339620 Rhodopseudomonas palustris DX-1 10063458 YP_004107616.1 CDS Rpdx1_1258 NC_014834.1 1339722 1339910 D KEGG: azo:azo2883 hypothetical protein; hypothetical protein 1339722..1339910 Rhodopseudomonas palustris DX-1 10063459 YP_004107617.1 CDS Rpdx1_1259 NC_014834.1 1339990 1340361 D KEGG: azl:AZL_025200 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 1339990..1340361 Rhodopseudomonas palustris DX-1 10063460 YP_004107618.1 CDS Rpdx1_1260 NC_014834.1 1340497 1341576 D KEGG: nwi:Nwi_0607 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1340497..1341576 Rhodopseudomonas palustris DX-1 10063461 YP_004107619.1 CDS Rpdx1_1261 NC_014834.1 1341637 1342851 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_2451 glutaryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1341637..1342851 Rhodopseudomonas palustris DX-1 10063462 YP_004107620.1 CDS Rpdx1_1262 NC_014834.1 1343038 1343970 D KEGG: bra:BRADO2135 putative beta-lactamase; putative beta-lactamase 1343038..1343970 Rhodopseudomonas palustris DX-1 10063463 YP_004107621.1 CDS Rpdx1_1263 NC_014834.1 1343984 1345741 R KEGG: bja:bll1533 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1343984..1345741) Rhodopseudomonas palustris DX-1 10063464 YP_004107622.1 CDS Rpdx1_1264 NC_014834.1 1345938 1346684 D PFAM: protein of unknown function DUF28; KEGG: bja:blr1534 hypothetical protein; hypothetical protein 1345938..1346684 Rhodopseudomonas palustris DX-1 10063465 YP_004107623.1 CDS Rpdx1_1265 NC_014834.1 1346973 1347494 D TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: oca:OCAR_7302 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 1346973..1347494 Rhodopseudomonas palustris DX-1 10063466 YP_004107624.1 CDS Rpdx1_1267 NC_014834.1 1347661 1348278 D KEGG: bja:blr1536 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; Holliday junction DNA helicase RuvA 1347661..1348278 Rhodopseudomonas palustris DX-1 10063468 YP_004107625.1 CDS Rpdx1_1268 NC_014834.1 1348275 1348700 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bbt:BBta_6907 hypothetical protein; zinc-binding CMP/dCMP deaminase protein 1348275..1348700 Rhodopseudomonas palustris DX-1 10063469 YP_004107626.1 CDS Rpdx1_1270 NC_014834.1 1348869 1349915 D TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: nha:Nham_3521 Holliday junction DNA helicase RuvB; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 1348869..1349915 Rhodopseudomonas palustris DX-1 10063471 YP_004107627.1 CDS Rpdx1_1271 NC_014834.1 1349912 1350160 D KEGG: hsl:OE3653R phosphoglyceromutase; hypothetical protein 1349912..1350160 Rhodopseudomonas palustris DX-1 10063472 YP_004107628.1 CDS Rpdx1_1272 NC_014834.1 1350167 1350613 D KEGG: nha:Nham_3520 4-hydroxybenzoyl-CoA thioesterase; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; tol-pal system-associated acyl-CoA thioesterase 1350167..1350613 Rhodopseudomonas palustris DX-1 10063473 YP_004107629.1 CDS Rpdx1_1273 NC_014834.1 1350711 1352021 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tmz:Tmz1t_3718 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1350711..1352021 Rhodopseudomonas palustris DX-1 10063474 YP_004107630.1 CDS Rpdx1_1274 NC_014834.1 1352132 1353382 D PFAM: conserved hypothetical protein; KEGG: bja:bll7876 putative OpgC protein; hypothetical protein 1352132..1353382 Rhodopseudomonas palustris DX-1 10063475 YP_004107631.1 CDS Rpdx1_1275 NC_014834.1 1353440 1353907 D PFAM: protein of unknown function DUF1348; KEGG: bja:bll7210 hypothetical protein; hypothetical protein 1353440..1353907 Rhodopseudomonas palustris DX-1 10063476 YP_004107632.1 CDS Rpdx1_1276 NC_014834.1 1353926 1354471 D PFAM: regulatory protein TetR; KEGG: xau:Xaut_1146 TetR family transcriptional regulator; regulatory protein TetR 1353926..1354471 Rhodopseudomonas palustris DX-1 10063477 YP_004107633.1 CDS Rpdx1_1277 NC_014834.1 1354574 1355032 D PFAM: YCII-related; KEGG: mno:Mnod_1364 YCII-related; hypothetical protein 1354574..1355032 Rhodopseudomonas palustris DX-1 10063478 YP_004107634.1 CDS Rpdx1_1278 NC_014834.1 1355029 1356297 D KEGG: bja:bll7170 hypothetical protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; putative ECF subfamily RNA polymerase sigma-24 subunit 1355029..1356297 Rhodopseudomonas palustris DX-1 10063479 YP_004107635.1 CDS Rpdx1_1279 NC_014834.1 1356318 1357106 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr7165 oxidoreductase; short-chain dehydrogenase/reductase SDR complement(1356318..1357106) Rhodopseudomonas palustris DX-1 10063480 YP_004107636.1 CDS Rpdx1_1280 NC_014834.1 1357362 1357538 D KEGG: rsh:Rsph17029_3809 hypothetical protein; hypothetical protein 1357362..1357538 Rhodopseudomonas palustris DX-1 10063481 YP_004107637.1 CDS Rpdx1_1281 NC_014834.1 1357657 1357758 R KEGG: bra:BRADO3129 hypothetical protein; hypothetical protein complement(1357657..1357758) Rhodopseudomonas palustris DX-1 10063482 YP_004107638.1 CDS Rpdx1_1282 NC_014834.1 1358083 1358499 D PFAM: YCII-related; KEGG: nha:Nham_3518 hypothetical protein; hypothetical protein 1358083..1358499 Rhodopseudomonas palustris DX-1 10063483 YP_004107639.1 CDS Rpdx1_1283 NC_014834.1 1358577 1359281 D PFAM: regulatory protein TetR; KEGG: nha:Nham_3517 TetR family transcriptional regulator; regulatory protein TetR 1358577..1359281 Rhodopseudomonas palustris DX-1 10063484 YP_004107640.1 CDS Rpdx1_1284 NC_014834.1 1359423 1359884 D KEGG: bja:bll7160 hypothetical protein; hypothetical protein 1359423..1359884 Rhodopseudomonas palustris DX-1 10063485 YP_004107641.1 CDS Rpdx1_1285 NC_014834.1 1360034 1360501 D KEGG: nha:Nham_3277 alkylhydroperoxidase AhpD core; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 1360034..1360501 Rhodopseudomonas palustris DX-1 10063486 YP_004107642.1 CDS Rpdx1_1286 NC_014834.1 1360485 1361408 D KEGG: sme:SM_b20030 RNA polymerase sigma factor SigJ; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1360485..1361408 Rhodopseudomonas palustris DX-1 10063487 YP_004107643.1 CDS Rpdx1_1287 NC_014834.1 1361683 1362393 D KEGG: bbt:BBta_6884 TolQ protein; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ 1361683..1362393 Rhodopseudomonas palustris DX-1 10063488 YP_004107644.1 CDS Rpdx1_1288 NC_014834.1 1362428 1362898 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bra:BRADO1171 putative TolR protein; biopolymer transport protein ExbD/TolR 1362428..1362898 Rhodopseudomonas palustris DX-1 10063489 YP_004107645.1 CDS Rpdx1_1289 NC_014834.1 1362949 1363947 D KEGG: nha:Nham_3513 putative TolA; putative TolA protein 1362949..1363947 Rhodopseudomonas palustris DX-1 10063490 YP_004107646.1 CDS Rpdx1_1290 NC_014834.1 1364020 1365354 D KEGG: nha:Nham_3512 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; Tol-Pal system beta propeller repeat-containing protein TolB 1364020..1365354 Rhodopseudomonas palustris DX-1 10063491 YP_004107647.1 CDS Rpdx1_1291 NC_014834.1 1365537 1367867 D TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: nha:Nham_3511 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 1365537..1367867 Rhodopseudomonas palustris DX-1 10063492 YP_004107648.1 CDS Rpdx1_1292 NC_014834.1 1368063 1368812 D KEGG: nha:Nham_3510 hypothetical protein; hypothetical protein 1368063..1368812 Rhodopseudomonas palustris DX-1 10063493 YP_004107649.1 CDS Rpdx1_1293 NC_014834.1 1369107 1369604 D KEGG: bja:bll7149 peptidoglycan-associated lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; peptidoglycan-associated lipoprotein 1369107..1369604 Rhodopseudomonas palustris DX-1 10063494 YP_004107650.1 CDS Rpdx1_1294 NC_014834.1 1369762 1370790 D TIGRFAM: tol-pal system protein YbgF; KEGG: bja:bll7148 hypothetical protein; tol-pal system protein YbgF 1369762..1370790 Rhodopseudomonas palustris DX-1 10063495 YP_004107651.1 CDS Rpdx1_1295 NC_014834.1 1370844 1371869 D KEGG: bja:bll7147 hypothetical protein; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; tRNA(Ile)-lysidine synthetase 1370844..1371869 Rhodopseudomonas palustris DX-1 10063496 YP_004107652.1 CDS Rpdx1_1296 NC_014834.1 1372105 1374021 D SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: nha:Nham_3506 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; ATP-dependent metalloprotease FtsH 1372105..1374021 Rhodopseudomonas palustris DX-1 10063497 YP_004107653.1 CDS Rpdx1_1297 NC_014834.1 1374252 1375349 D KEGG: tmz:Tmz1t_1487 hypothetical protein; hypothetical protein 1374252..1375349 Rhodopseudomonas palustris DX-1 10063498 YP_004107654.1 CDS Rpdx1_1298 NC_014834.1 1375393 1376199 D PFAM: AzlC family protein; KEGG: azc:AZC_0085 putative branched-chain amino acid transport protein; AzlC family protein 1375393..1376199 Rhodopseudomonas palustris DX-1 10063499 YP_004107655.1 CDS Rpdx1_1299 NC_014834.1 1376196 1376513 D PFAM: branched-chain amino acid transport; KEGG: xau:Xaut_1764 branched-chain amino acid transport; branched-chain amino acid transport 1376196..1376513 Rhodopseudomonas palustris DX-1 10063500 YP_004107656.1 CDS Rpdx1_1300 NC_014834.1 1376698 1377372 D PFAM: regulatory protein TetR; KEGG: bbt:BBta_6871 TetR family transcriptional regulator; regulatory protein TetR 1376698..1377372 Rhodopseudomonas palustris DX-1 10063501 YP_004107657.1 CDS Rpdx1_1301 NC_014834.1 1377496 1378989 D PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_1662 glycolate oxidase, subunit GlcD; FAD linked oxidase domain-containing protein 1377496..1378989 Rhodopseudomonas palustris DX-1 10063502 YP_004107658.1 CDS Rpdx1_1302 NC_014834.1 1379159 1380400 D PFAM: FAD linked oxidase domain protein; KEGG: bja:bll7541 glycolate oxidase subunit; FAD linked oxidase domain-containing protein 1379159..1380400 Rhodopseudomonas palustris DX-1 10063503 YP_004107659.1 CDS Rpdx1_1303 NC_014834.1 1380397 1381710 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: nha:Nham_3202 protein of unknown function DUF224, cysteine-rich region; hypothetical protein 1380397..1381710 Rhodopseudomonas palustris DX-1 10063504 YP_004107660.1 CDS Rpdx1_1304 NC_014834.1 1381785 1382708 D KEGG: pfs:PFLU5927 transcriptional regulatory protein algp (alginate regulatory protein algr3); hypothetical protein 1381785..1382708 Rhodopseudomonas palustris DX-1 10063505 YP_004107661.1 CDS Rpdx1_1305 NC_014834.1 1383171 1384100 D KEGG: oca:OCAR_7278 hypothetical protein; hypothetical protein 1383171..1384100 Rhodopseudomonas palustris DX-1 10063506 YP_004107662.1 CDS Rpdx1_1306 NC_014834.1 1384319 1386070 R KEGG: bbt:BBta_1667 putative ABC transporter (fused ATP-binding and permease components); PFAM: ABC transporter domain protein; ABC transporter related; SMART: AAA ATPase; ABC transporter domain-containing protein complement(1384319..1386070) Rhodopseudomonas palustris DX-1 10063507 YP_004107663.1 CDS Rpdx1_1307 NC_014834.1 1386456 1386869 D KEGG: nha:Nham_3198 hypothetical protein; hypothetical protein 1386456..1386869 Rhodopseudomonas palustris DX-1 10063508 YP_004107664.1 CDS Rpdx1_1308 NC_014834.1 1386866 1388377 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: oca:OCAR_7274 amine oxidase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(1386866..1388377) Rhodopseudomonas palustris DX-1 10063509 YP_004107665.1 CDS Rpdx1_1309 NC_014834.1 1388481 1389671 R KEGG: bbt:BBta_1670 hypothetical protein; hypothetical protein complement(1388481..1389671) Rhodopseudomonas palustris DX-1 10063510 YP_004107666.1 CDS Rpdx1_1310 NC_014834.1 1389969 1391615 R KEGG: bbt:BBta_1671 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; chaperonin GroEL complement(1389969..1391615) Rhodopseudomonas palustris DX-1 10063511 YP_004107667.1 CDS Rpdx1_1311 NC_014834.1 1391655 1391951 R PFAM: Chaperonin Cpn10; KEGG: nwi:Nwi_2573 co-chaperonin GroES; chaperonin Cpn10 complement(1391655..1391951) Rhodopseudomonas palustris DX-1 10063512 YP_004107668.1 CDS Rpdx1_1312 NC_014834.1 1392257 1392772 D KEGG: bja:bll7531 hypothetical protein; hypothetical protein 1392257..1392772 Rhodopseudomonas palustris DX-1 10063513 YP_004107669.1 CDS Rpdx1_1313 NC_014834.1 1392820 1394028 D PFAM: major facilitator superfamily MFS_1; KEGG: oca:OCAR_7269 major facilitator superfamily MFS_1; major facilitator superfamily protein 1392820..1394028 Rhodopseudomonas palustris DX-1 10063514 YP_004107670.1 CDS Rpdx1_1314 NC_014834.1 1394058 1394789 R KEGG: bbt:BBta_1674 hypothetical protein; hypothetical protein complement(1394058..1394789) Rhodopseudomonas palustris DX-1 10063515 YP_004107671.1 CDS Rpdx1_1315 NC_014834.1 1395142 1395927 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_3192 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 1395142..1395927 Rhodopseudomonas palustris DX-1 10063516 YP_004107672.1 CDS Rpdx1_1316 NC_014834.1 1396029 1396889 R PFAM: Protein of unknown function DUF2076; KEGG: bja:blr7528 hypothetical protein; putative periplasmic ligand-binding sensor protein complement(1396029..1396889) Rhodopseudomonas palustris DX-1 10063517 YP_004107673.1 CDS Rpdx1_1317 NC_014834.1 1396987 1397880 R PFAM: YdjC family protein; KEGG: nha:Nham_3190 YdjC-like protein; hypothetical protein complement(1396987..1397880) Rhodopseudomonas palustris DX-1 10063518 YP_004107674.1 CDS Rpdx1_1318 NC_014834.1 1397877 1398929 R PFAM: glycosyl transferase family 2; KEGG: bja:blr7526 glycosyl transferase; glycosyl transferase family 2 protein complement(1397877..1398929) Rhodopseudomonas palustris DX-1 10063519 YP_004107675.1 CDS Rpdx1_1319 NC_014834.1 1399026 1400003 R TIGRFAM: ATP phosphoribosyltransferase; KEGG: bra:BRADO6107 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase complement(1399026..1400003) Rhodopseudomonas palustris DX-1 10063520 YP_004107676.1 CDS Rpdx1_1320 NC_014834.1 1400000 1401148 R KEGG: bra:BRADO6106 ATP phosphoribosyltransferase regulatory subunit; PFAM: tRNA synthetase class II (G H P and S); Histidine--tRNA ligase complement(1400000..1401148) Rhodopseudomonas palustris DX-1 10063521 YP_004107677.1 CDS Rpdx1_1321 NC_014834.1 1401274 1402047 R PFAM: protein of unknown function DUF558; KEGG: bja:blr7523 16S ribosomal RNA methyltransferase RsmE; hypothetical protein complement(1401274..1402047) Rhodopseudomonas palustris DX-1 10063522 YP_004107678.1 CDS Rpdx1_1322 NC_014834.1 1402241 1402948 D KEGG: bja:bll7522 hypothetical protein; hypothetical protein 1402241..1402948 Rhodopseudomonas palustris DX-1 10063523 YP_004107679.1 CDS Rpdx1_1323 NC_014834.1 1402945 1403895 D KEGG: bja:bll7521 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate polyprenyltransferase 1402945..1403895 Rhodopseudomonas palustris DX-1 10063524 YP_004107680.1 CDS Rpdx1_1324 NC_014834.1 1403931 1404455 R KEGG: bra:BRADO6101 hypothetical protein; hypothetical protein complement(1403931..1404455) Rhodopseudomonas palustris DX-1 10063525 YP_004107681.1 CDS Rpdx1_1325 NC_014834.1 1404753 1406150 D KEGG: bja:bll7519 PmbA/TldD related protein; manually curated; PFAM: peptidase U62 modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 1404753..1406150 Rhodopseudomonas palustris DX-1 10063526 YP_004107682.1 CDS Rpdx1_1326 NC_014834.1 1406137 1406952 D PFAM: inositol monophosphatase; KEGG: nha:Nham_3181 inositol monophosphatase; inositol monophosphatase 1406137..1406952 Rhodopseudomonas palustris DX-1 10063527 YP_004107683.1 CDS Rpdx1_1327 NC_014834.1 1406990 1407238 D KEGG: nha:Nham_3180 hypothetical protein; hypothetical protein 1406990..1407238 Rhodopseudomonas palustris DX-1 10063528 YP_004107684.1 CDS Rpdx1_1328 NC_014834.1 1407308 1408612 D PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: bra:BRADO6096 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase); three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 1407308..1408612 Rhodopseudomonas palustris DX-1 10063529 YP_004107685.1 CDS Rpdx1_1329 NC_014834.1 1408605 1409627 D TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: nha:Nham_3177 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 1408605..1409627 Rhodopseudomonas palustris DX-1 10063530 YP_004107686.1 CDS Rpdx1_1330 NC_014834.1 1409635 1409862 R PFAM: Protein of unknown function DUF2093; KEGG: bra:BRADO6094 hypothetical protein; hypothetical protein complement(1409635..1409862) Rhodopseudomonas palustris DX-1 10063531 YP_004107687.1 CDS Rpdx1_1331 NC_014834.1 1410008 1411621 R TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: nwi:Nwi_2553 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit complement(1410008..1411621) Rhodopseudomonas palustris DX-1 10063532 YP_004107688.1 CDS Rpdx1_1332 NC_014834.1 1411858 1413141 D TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: nha:Nham_3173 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine/glycine ligase 1411858..1413141 Rhodopseudomonas palustris DX-1 10063533 YP_004107689.1 CDS Rpdx1_1333 NC_014834.1 1413290 1414198 D PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO6083 putative hydrolase; alpha/beta hydrolase fold protein 1413290..1414198 Rhodopseudomonas palustris DX-1 10063534 YP_004107690.1 CDS Rpdx1_1334 NC_014834.1 1414182 1414628 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: oca:OCAR_7244 tRNA-specific adenosine deaminase; zinc-binding CMP/dCMP deaminase protein complement(1414182..1414628) Rhodopseudomonas palustris DX-1 10063535 YP_004107691.1 CDS Rpdx1_1335 NC_014834.1 1414795 1416948 D KEGG: nha:Nham_3171 pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1414795..1416948 Rhodopseudomonas palustris DX-1 10063536 YP_004107692.1 CDS Rpdx1_1336 NC_014834.1 1417187 1417750 D KEGG: bja:bll7494 hypothetical protein; TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; methyltransferase 1417187..1417750 Rhodopseudomonas palustris DX-1 10063537 YP_004107693.1 CDS Rpdx1_1337 NC_014834.1 1417885 1418898 R KEGG: bja:blr7474 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific complement(1417885..1418898) Rhodopseudomonas palustris DX-1 10063538 YP_004107694.1 CDS Rpdx1_1338 NC_014834.1 1418898 1419365 R PFAM: molybdopterin biosynthesis MoaE protein; KEGG: nha:Nham_3143 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE protein complement(1418898..1419365) Rhodopseudomonas palustris DX-1 10063539 YP_004107695.1 CDS Rpdx1_1339 NC_014834.1 1419391 1419642 R KEGG: bbt:BBta_1725 molybdopterin synthase subunit MoaD; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; molybdopterin converting factor subunit 1 complement(1419391..1419642) Rhodopseudomonas palustris DX-1 10063540 YP_004107696.1 CDS Rpdx1_1340 NC_014834.1 1419639 1420265 R TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: nwi:Nwi_2525 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase complement(1419639..1420265) Rhodopseudomonas palustris DX-1 10063541 YP_004107697.1 CDS Rpdx1_1341 NC_014834.1 1420402 1422501 R TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: nha:Nham_3146 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C complement(1420402..1422501) Rhodopseudomonas palustris DX-1 10063542 YP_004107698.1 CDS Rpdx1_1342 NC_014834.1 1422812 1423435 D KEGG: bja:bll7469 putative outer-membrane immunogenic protein precursor; putative outer-membrane immunogenic protein 1422812..1423435 Rhodopseudomonas palustris DX-1 10063543 YP_004107699.1 CDS Rpdx1_1343 NC_014834.1 1423689 1423901 R KEGG: bra:BRADO6053 cold shock protein, DNA binding; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(1423689..1423901) Rhodopseudomonas palustris DX-1 10063544 YP_004107700.1 CDS Rpdx1_1344 NC_014834.1 1424175 1425032 R PFAM: protein of unknown function DUF519; KEGG: nha:Nham_3149 hypothetical protein; hypothetical protein complement(1424175..1425032) Rhodopseudomonas palustris DX-1 10063545 YP_004107701.1 CDS Rpdx1_1345 NC_014834.1 1425468 1425863 D KEGG: nha:Nham_3160 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1425468..1425863 Rhodopseudomonas palustris DX-1 10063546 YP_004107702.1 CDS Rpdx1_1346 NC_014834.1 1425955 1426350 R KEGG: bja:bll7455 hypothetical protein; hypothetical protein complement(1425955..1426350) Rhodopseudomonas palustris DX-1 10063547 YP_004107703.1 CDS Rpdx1_1347 NC_014834.1 1426454 1426657 R PFAM: 4-oxalocrotonate tautomerase; KEGG: bbt:BBta_1741 putative 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(1426454..1426657) Rhodopseudomonas palustris DX-1 10063548 YP_004107704.1 CDS Rpdx1_1348 NC_014834.1 1426918 1428447 R TIGRFAM: histidyl-tRNA synthetase; KEGG: nwi:Nwi_2533 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase complement(1426918..1428447) Rhodopseudomonas palustris DX-1 10063549 YP_004107705.1 CDS Rpdx1_1349 NC_014834.1 1428662 1430008 D KEGG: bbt:BBta_1722 beta alanine--pyruvate transaminase; PFAM: aminotransferase class-III; beta-alanine--pyruvate transaminase 1428662..1430008 Rhodopseudomonas palustris DX-1 10063550 YP_004107706.1 CDS Rpdx1_1350 NC_014834.1 1430106 1431644 D KEGG: bra:BRADO6063 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 1430106..1431644 Rhodopseudomonas palustris DX-1 10063551 YP_004107707.1 CDS Rpdx1_1351 NC_014834.1 1431657 1432511 D KEGG: bja:blr7478 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; HAD-superfamily subfamily IIA hydrolase like protein; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 1431657..1432511 Rhodopseudomonas palustris DX-1 10063552 YP_004107708.1 CDS Rpdx1_1352 NC_014834.1 1432543 1434627 R PFAM: protein of unknown function DUF1355; KEGG: bra:BRADO1961 hypothetical protein; hypothetical protein complement(1432543..1434627) Rhodopseudomonas palustris DX-1 10063553 YP_004107709.1 CDS Rpdx1_1353 NC_014834.1 1434756 1437581 R TIGRFAM: conserved hypothetical protein; KEGG: nha:Nham_3253 double-transmembrane region-like; hypothetical protein complement(1434756..1437581) Rhodopseudomonas palustris DX-1 10063554 YP_004107710.1 CDS Rpdx1_1354 NC_014834.1 1437578 1438510 R PFAM: protein of unknown function DUF58; KEGG: bbt:BBta_2270 hypothetical protein; hypothetical protein complement(1437578..1438510) Rhodopseudomonas palustris DX-1 10063555 YP_004107711.1 CDS Rpdx1_1355 NC_014834.1 1438510 1439514 R PFAM: ATPase associated with various cellular activities AAA_3; KEGG: bbt:BBta_2271 putative MoxR family protein; ATPase complement(1438510..1439514) Rhodopseudomonas palustris DX-1 10063556 YP_004107712.1 CDS Rpdx1_1356 NC_014834.1 1439748 1440359 D PFAM: protein of unknown function DUF1285; KEGG: nwi:Nwi_2625 hypothetical protein; hypothetical protein 1439748..1440359 Rhodopseudomonas palustris DX-1 10063557 YP_004107713.1 CDS Rpdx1_1357 NC_014834.1 1440356 1441033 D PFAM: NUDIX hydrolase; KEGG: bra:BRADO1966 putative NUDIX hydrolase; NUDIX hydrolase 1440356..1441033 Rhodopseudomonas palustris DX-1 10063558 YP_004107714.1 CDS Rpdx1_1358 NC_014834.1 1441030 1441293 D KEGG: bbt:BBta_2274 hypothetical protein; hypothetical protein 1441030..1441293 Rhodopseudomonas palustris DX-1 10063559 YP_004107715.1 CDS Rpdx1_1359 NC_014834.1 1441290 1442546 D PFAM: Polynucleotide adenylyltransferase region; KEGG: nha:Nham_3247 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 1441290..1442546 Rhodopseudomonas palustris DX-1 10063560 YP_004107716.1 CDS Rpdx1_1360 NC_014834.1 1442755 1442979 R PFAM: Protein of unknown function DUF2158; KEGG: bja:bsl2479 hypothetical protein; hypothetical protein complement(1442755..1442979) Rhodopseudomonas palustris DX-1 10063561 YP_004107717.1 CDS Rpdx1_1361 NC_014834.1 1443056 1443688 R PFAM: Radical SAM domain protein; KEGG: nwi:Nwi_2619 hypothetical protein; radical SAM protein complement(1443056..1443688) Rhodopseudomonas palustris DX-1 10063562 YP_004107718.1 CDS Rpdx1_1362 NC_014834.1 1443699 1444154 R PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: nwi:Nwi_2618 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU complement(1443699..1444154) Rhodopseudomonas palustris DX-1 10063563 YP_004107719.1 CDS Rpdx1_1363 NC_014834.1 1444411 1444956 D KEGG: bja:blr2485 Rieske iron-sulfur protein; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1444411..1444956 Rhodopseudomonas palustris DX-1 10063564 YP_004107720.1 CDS Rpdx1_1364 NC_014834.1 1444997 1447063 D PFAM: cytochrome c1; Cytochrome b/b6 domain; KEGG: bbt:BBta_2301 cytochrome b/c1; cytochrome c1 1444997..1447063 Rhodopseudomonas palustris DX-1 10063565 YP_004107721.1 CDS Rpdx1_1365 NC_014834.1 1447213 1447887 D KEGG: bja:blr2487 hypothetical protein; carboxymethylenebutenolidase 1447213..1447887 Rhodopseudomonas palustris DX-1 10063566 YP_004107722.1 CDS Rpdx1_1366 NC_014834.1 1447978 1448202 D manually curated; KEGG: bbt:BBta_2461 hypothetical protein; hypothetical protein 1447978..1448202 Rhodopseudomonas palustris DX-1 10063567 YP_004107723.1 CDS Rpdx1_1367 NC_014834.1 1448339 1449115 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_2462 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1448339..1449115) Rhodopseudomonas palustris DX-1 10063568 YP_004107724.1 CDS Rpdx1_1368 NC_014834.1 1449112 1449750 R TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: bja:bll2624 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like; pyridoxamine 5'-phosphate oxidase complement(1449112..1449750) Rhodopseudomonas palustris DX-1 10063569 YP_004107725.1 CDS Rpdx1_1369 NC_014834.1 1449766 1450284 D KEGG: nha:Nham_0766 hypothetical protein; hypothetical protein 1449766..1450284 Rhodopseudomonas palustris DX-1 10063570 YP_004107726.1 CDS Rpdx1_1370 NC_014834.1 1450401 1451372 D KEGG: bra:BRADO2148 putative heat shock protein DnaJ; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 1450401..1451372 Rhodopseudomonas palustris DX-1 10063571 YP_004107727.1 CDS Rpdx1_1371 NC_014834.1 1451582 1452403 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2151 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 1451582..1452403 Rhodopseudomonas palustris DX-1 10063572 YP_004107728.1 CDS Rpdx1_1372 NC_014834.1 1452501 1453094 D PFAM: Phosphoglycerate mutase; KEGG: bja:blr2630 phosphoglycerate mutase; phosphoglycerate mutase 1452501..1453094 Rhodopseudomonas palustris DX-1 10063573 YP_004107729.1 CDS Rpdx1_1373 NC_014834.1 1453243 1454331 D TIGRFAM: chorismate synthase; KEGG: bja:blr2631 chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1453243..1454331 Rhodopseudomonas palustris DX-1 10063574 YP_004107730.1 CDS Rpdx1_1374 NC_014834.1 1454442 1455641 D KEGG: bja:blr2632 putative adenylate cyclase protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase 1454442..1455641 Rhodopseudomonas palustris DX-1 10063575 YP_004107731.1 CDS Rpdx1_1375 NC_014834.1 1455900 1456205 R PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: bja:bll2636 ATP-dependent Clp protease adaptor; ATP-dependent Clp protease adaptor protein ClpS complement(1455900..1456205) Rhodopseudomonas palustris DX-1 10063576 YP_004107732.1 CDS Rpdx1_1376 NC_014834.1 1456409 1457251 D PFAM: protein of unknown function DUF1194; KEGG: bja:blr2641 hypothetical protein; hypothetical protein 1456409..1457251 Rhodopseudomonas palustris DX-1 10063577 YP_004107733.1 CDS Rpdx1_1377 NC_014834.1 1457488 1458891 R PFAM: Carotenoid oxygenase; KEGG: bja:blr5790 putative lignostilbene-alpha,beta-dioxygenase; carotenoid oxygenase complement(1457488..1458891) Rhodopseudomonas palustris DX-1 10063578 YP_004107734.1 CDS Rpdx1_1378 NC_014834.1 1458929 1460308 R KEGG: hha:Hhal_0248 hypothetical protein; hypothetical protein complement(1458929..1460308) Rhodopseudomonas palustris DX-1 10063579 YP_004107735.1 CDS Rpdx1_1379 NC_014834.1 1460301 1461410 R KEGG: hha:Hhal_0249 hypothetical protein; hypothetical protein complement(1460301..1461410) Rhodopseudomonas palustris DX-1 10063580 YP_004107736.1 CDS Rpdx1_1380 NC_014834.1 1461429 1462469 R KEGG: hha:Hhal_0250 hypothetical protein; hypothetical protein complement(1461429..1462469) Rhodopseudomonas palustris DX-1 10063581 YP_004107737.1 CDS Rpdx1_1381 NC_014834.1 1462642 1463637 R PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO1608 putative alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(1462642..1463637) Rhodopseudomonas palustris DX-1 10063582 YP_004107738.1 CDS Rpdx1_1382 NC_014834.1 1463861 1465363 R PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: bja:blr5601 hypothetical protein; microcystin LR degradation protein MlrC-like protein complement(1463861..1465363) Rhodopseudomonas palustris DX-1 10063583 YP_004107739.1 CDS Rpdx1_1383 NC_014834.1 1465492 1467144 R KEGG: bbt:BBta_5258 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter-like protein complement(1465492..1467144) Rhodopseudomonas palustris DX-1 10063584 YP_004107740.1 CDS Rpdx1_1384 NC_014834.1 1467212 1468102 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2920 putative ABC transporter (permease protein); putative membrane protein; binding-protein-dependent transporter inner membrane component complement(1467212..1468102) Rhodopseudomonas palustris DX-1 10063585 YP_004107741.1 CDS Rpdx1_1385 NC_014834.1 1468114 1469055 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_5256 putative ABC transporter (permease protein); binding-protein-dependent transporter inner membrane component complement(1468114..1469055) Rhodopseudomonas palustris DX-1 10063586 YP_004107742.1 CDS Rpdx1_1386 NC_014834.1 1469216 1470346 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bbt:BBta_5255 carboxypeptidase; peptidase M20 complement(1469216..1470346) Rhodopseudomonas palustris DX-1 10063587 YP_004107743.1 CDS Rpdx1_1387 NC_014834.1 1470599 1472209 D PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_5254 putative ABC transporter (substrate-binding protein); family 5 extracellular solute-binding protein 1470599..1472209 Rhodopseudomonas palustris DX-1 10063588 YP_004107744.1 CDS Rpdx1_1388 NC_014834.1 1472410 1473036 R KEGG: dwi:Dwil_GK22681 GK22681 gene product from transcript GK22681-RA; hypothetical protein complement(1472410..1473036) Rhodopseudomonas palustris DX-1 10063589 YP_004107745.1 CDS Rpdx1_1389 NC_014834.1 1473516 1474532 D KEGG: bbt:BBta_3002 signal-transduction protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; putative signal transduction protein 1473516..1474532 Rhodopseudomonas palustris DX-1 10063590 YP_004107746.1 CDS Rpdx1_1390 NC_014834.1 1474555 1475346 R KEGG: bln:Blon_1962 sulfatase; hypothetical protein complement(1474555..1475346) Rhodopseudomonas palustris DX-1 10063591 YP_004107747.1 CDS Rpdx1_1391 NC_014834.1 1475375 1476307 R PFAM: CHAD domain containing protein; KEGG: mch:Mchl_3398 CHAD domain containing protein; CHAD domain-containing protein complement(1475375..1476307) Rhodopseudomonas palustris DX-1 10063592 YP_004107748.1 CDS Rpdx1_1392 NC_014834.1 1476427 1476750 R KEGG: psb:Psyr_0088 PAS:GGDEF; hypothetical protein complement(1476427..1476750) Rhodopseudomonas palustris DX-1 10063593 YP_004107749.1 CDS Rpdx1_1393 NC_014834.1 1477021 1478589 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: chy:CHY_0121 indolepyruvate ferredoxin oxidoreductase, IorA subunit; thiamine pyrophosphate domain-containing TPP-binding protein 1477021..1478589 Rhodopseudomonas palustris DX-1 10063594 YP_004107750.1 CDS Rpdx1_1394 NC_014834.1 1478702 1484839 R KEGG: bra:BRADO5083 putative methyl-accepting chemotaxis protein; putative methyl-accepting chemotaxis protein complement(1478702..1484839) Rhodopseudomonas palustris DX-1 10063595 YP_004107751.1 CDS Rpdx1_1395 NC_014834.1 1485251 1485640 D PFAM: Hpt domain protein; KEGG: bja:bll5886 two-component hybrid sensor and regulator; Hpt domain-containing protein 1485251..1485640 Rhodopseudomonas palustris DX-1 10063596 YP_004107752.1 CDS Rpdx1_1396 NC_014834.1 1485737 1486057 D PFAM: ferredoxin; KEGG: bja:bll5885 ferrodoxin; ferredoxin 1485737..1486057 Rhodopseudomonas palustris DX-1 10063597 YP_004107753.1 CDS Rpdx1_1397 NC_014834.1 1486188 1486643 R PFAM: thioesterase superfamily protein; KEGG: bja:blr5884 hypothetical protein; thioesterase superfamily protein complement(1486188..1486643) Rhodopseudomonas palustris DX-1 10063598 YP_004107754.1 CDS Rpdx1_1398 NC_014834.1 1486804 1487832 D KEGG: nha:Nham_1321 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NADP(+) reductase 1486804..1487832 Rhodopseudomonas palustris DX-1 10063599 YP_004107755.1 CDS Rpdx1_1399 NC_014834.1 1488011 1489294 D PFAM: Cl- channel voltage-gated family protein; KEGG: bra:BRADO3095 putative H(+)/Cl(-) exchange transporter; Cl- channel voltage-gated family protein 1488011..1489294 Rhodopseudomonas palustris DX-1 10063600 YP_004107756.1 CDS Rpdx1_1400 NC_014834.1 1489323 1490363 R PFAM: glycosyl transferase family 2; KEGG: ppd:Ppro_3227 glycosyl transferase family protein; glycosyl transferase family 2 protein complement(1489323..1490363) Rhodopseudomonas palustris DX-1 10063601 YP_004107757.1 CDS Rpdx1_1401 NC_014834.1 1490530 1491855 D PFAM: glycosyl transferase group 1; KEGG: bte:BTH_I1330 glycosyltransferase WbpX, putative; glycosyl transferase group 1 protein 1490530..1491855 Rhodopseudomonas palustris DX-1 10063602 YP_004107758.1 CDS Rpdx1_1402 NC_014834.1 1491863 1493134 D KEGG: aeh:Mlg_2800 O-antigen polymerase; hypothetical protein 1491863..1493134 Rhodopseudomonas palustris DX-1 10063603 YP_004107759.1 CDS Rpdx1_1403 NC_014834.1 1493224 1493898 D PFAM: Protein of unknown function DUF2147; KEGG: bja:bll5882 hypothetical protein; hypothetical protein 1493224..1493898 Rhodopseudomonas palustris DX-1 10063604 YP_004107760.1 CDS Rpdx1_1404 NC_014834.1 1494065 1496104 R KEGG: bbt:BBta_5548 hypothetical protein; hypothetical protein complement(1494065..1496104) Rhodopseudomonas palustris DX-1 10063605 YP_004107761.1 CDS Rpdx1_1405 NC_014834.1 1496199 1497272 R KEGG: nha:Nham_1324 hypothetical protein; hypothetical protein complement(1496199..1497272) Rhodopseudomonas palustris DX-1 10063606 YP_004107762.1 CDS Rpdx1_1406 NC_014834.1 1497257 1497349 R hypothetical protein complement(1497257..1497349) Rhodopseudomonas palustris DX-1 10063607 YP_004107763.1 CDS Rpdx1_1407 NC_014834.1 1497667 1498173 D PFAM: protein of unknown function DUF892; KEGG: bja:bll5866 hypothetical protein; hypothetical protein 1497667..1498173 Rhodopseudomonas palustris DX-1 10063608 YP_004107764.1 CDS Rpdx1_1408 NC_014834.1 1498271 1498711 R KEGG: nha:Nham_1325 hypothetical protein; hypothetical protein complement(1498271..1498711) Rhodopseudomonas palustris DX-1 10063609 YP_004107765.1 CDS Rpdx1_1409 NC_014834.1 1498830 1499459 D KEGG: nha:Nham_1326 hypothetical protein; hypothetical protein 1498830..1499459 Rhodopseudomonas palustris DX-1 10063610 YP_004107766.1 CDS Rpdx1_1410 NC_014834.1 1499485 1499916 R PFAM: UspA domain protein; KEGG: bra:BRADO5069 putative universal stress protein (Usp); UspA domain-containing protein complement(1499485..1499916) Rhodopseudomonas palustris DX-1 10063611 YP_004107767.1 CDS Rpdx1_1411 NC_014834.1 1499962 1500492 R PFAM: Phosphoglycerate mutase; KEGG: nha:Nham_1328 putative phosphohistidine phosphatase, SixA; putative phosphohistidine phosphatase SixA complement(1499962..1500492) Rhodopseudomonas palustris DX-1 10063612 YP_004107768.1 CDS Rpdx1_1412 NC_014834.1 1500635 1502095 D PFAM: FAD dependent oxidoreductase; KEGG: bja:bll5856 hypothetical protein; FAD dependent oxidoreductase 1500635..1502095 Rhodopseudomonas palustris DX-1 10063613 YP_004107769.1 CDS Rpdx1_1413 NC_014834.1 1502249 1502746 D TIGRFAM: methionine-R-sulfoxide reductase; KEGG: nha:Nham_1330 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 1502249..1502746 Rhodopseudomonas palustris DX-1 10063614 YP_004107770.1 CDS Rpdx1_1414 NC_014834.1 1502904 1504397 D KEGG: cbd:CBUD_1484 undecaprenyl-phosphomannose:protein mannosyltransferase; hypothetical protein 1502904..1504397 Rhodopseudomonas palustris DX-1 10063615 YP_004107771.1 CDS Rpdx1_1415 NC_014834.1 1504447 1504719 R KEGG: bbt:BBta_2392 hypothetical protein; hypothetical protein complement(1504447..1504719) Rhodopseudomonas palustris DX-1 10063616 YP_004107772.1 CDS Rpdx1_1417 NC_014834.1 1509419 1511269 D KEGG: oca:OCAR_5369 flagellar basal body FlaE domain protein; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar hook-basal body protein 1509419..1511269 Rhodopseudomonas palustris DX-1 10063618 YP_004107773.1 CDS Rpdx1_1418 NC_014834.1 1511310 1513181 D KEGG: oca:OCAR_5370 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK 1511310..1513181 Rhodopseudomonas palustris DX-1 10063619 YP_004107774.1 CDS Rpdx1_1419 NC_014834.1 1513190 1514797 D KEGG: oca:OCAR_5371 hypothetical protein; hypothetical protein 1513190..1514797 Rhodopseudomonas palustris DX-1 10063620 YP_004107775.1 CDS Rpdx1_1420 NC_014834.1 1515105 1517783 D PFAM: protein of unknown function DUF1522; KEGG: bja:bll5846 flagellin; hypothetical protein 1515105..1517783 Rhodopseudomonas palustris DX-1 10063621 YP_004107776.1 CDS Rpdx1_1421 NC_014834.1 1517935 1518867 D TIGRFAM: methyltransferase FkbM family; KEGG: cyn:Cyan7425_2162 methyltransferase FkbM family; FkbM family methyltransferase 1517935..1518867 Rhodopseudomonas palustris DX-1 10063622 YP_004107777.1 CDS Rpdx1_1422 NC_014834.1 1518991 1519659 D PFAM: sugar isomerase (SIS); KEGG: rlt:Rleg2_5603 sugar isomerase (SIS); sugar isomerase 1518991..1519659 Rhodopseudomonas palustris DX-1 10063623 YP_004107778.1 CDS Rpdx1_1423 NC_014834.1 1519801 1520739 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bbt:BBta_5633 putative sugar-nucleotide epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1519801..1520739 Rhodopseudomonas palustris DX-1 10063624 YP_004107779.1 CDS Rpdx1_1424 NC_014834.1 1520736 1521773 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bbt:BBta_5635 putative dTDP-glucose 4,6-dehydratase; NAD-dependent epimerase/dehydratase 1520736..1521773 Rhodopseudomonas palustris DX-1 10063625 YP_004107780.1 CDS Rpdx1_1425 NC_014834.1 1521782 1522441 D PFAM: Methyltransferase type 11; KEGG: cbd:CBUD_0696 methyltransferase; type 11 methyltransferase 1521782..1522441 Rhodopseudomonas palustris DX-1 10063626 YP_004107781.1 CDS Rpdx1_1426 NC_014834.1 1522438 1523412 D KEGG: cbu:CBU_0693 putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase 1522438..1523412 Rhodopseudomonas palustris DX-1 10063627 YP_004107782.1 CDS Rpdx1_1427 NC_014834.1 1523423 1524475 D PFAM: Transketolase central region; Transketolase domain protein; KEGG: cbd:CBUD_0706 pyruvate dehydrogenase E1 component beta subunit; transketolase central region 1523423..1524475 Rhodopseudomonas palustris DX-1 10063628 YP_004107783.1 CDS Rpdx1_1428 NC_014834.1 1524483 1524629 D hypothetical protein 1524483..1524629 Rhodopseudomonas palustris DX-1 10063629 YP_004107784.1 CDS Rpdx1_1429 NC_014834.1 1524620 1525675 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_5638 putative alcohol dehydrogenase (zinc-binding); alcohol dehydrogenase zinc-binding domain-containing protein 1524620..1525675 Rhodopseudomonas palustris DX-1 10063630 YP_004107785.1 CDS Rpdx1_1430 NC_014834.1 1525681 1527165 D KEGG: bra:BRADO5164 putative bifunctional enzyme (sugar kinase/cytidylyltransferase); TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; PfkB domain protein; cytidyltransferase-like domain-containing protein 1525681..1527165 Rhodopseudomonas palustris DX-1 10063631 YP_004107786.1 CDS Rpdx1_1431 NC_014834.1 1527162 1528091 D PFAM: Nucleotidyl transferase; KEGG: bbt:BBta_5632 putative sugar-phosphate nucleotidyl transferase; nucleotidyl transferase 1527162..1528091 Rhodopseudomonas palustris DX-1 10063632 YP_004107787.1 CDS Rpdx1_1432 NC_014834.1 1528088 1528894 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lhk:LHK_02873 probable oxidoreductase; short-chain dehydrogenase/reductase SDR 1528088..1528894 Rhodopseudomonas palustris DX-1 10063633 YP_004107788.1 CDS Rpdx1_1433 NC_014834.1 1528918 1530720 D PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sus:Acid_2243 thiamine pyrophosphate binding domain-containing protein; thiamine pyrophosphate domain-containing TPP-binding protein 1528918..1530720 Rhodopseudomonas palustris DX-1 10063634 YP_004107789.1 CDS Rpdx1_1434 NC_014834.1 1530733 1532880 R KEGG: bra:BRADO1360 O-linked N-acetylglucosamine transferase; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; hypothetical protein complement(1530733..1532880) Rhodopseudomonas palustris DX-1 10063635 YP_004107790.1 CDS Rpdx1_1435 NC_014834.1 1533403 1536066 D PFAM: protein of unknown function DUF1522; KEGG: bja:bll5846 flagellin; hypothetical protein 1533403..1536066 Rhodopseudomonas palustris DX-1 10063636 YP_004107791.1 CDS Rpdx1_1436 NC_014834.1 1536282 1536662 D PFAM: flagellar FlbT family protein; KEGG: bra:BRADO7004 flagellar biosynthesis repressor FlbT; flagellar FlbT family protein 1536282..1536662 Rhodopseudomonas palustris DX-1 10063637 YP_004107792.1 CDS Rpdx1_1437 NC_014834.1 1536666 1537034 D PFAM: flagellar FlaF family protein; KEGG: oca:OCAR_5375 flagellar biosynthesis regulatory protein FlaF; flagellar FlaF family protein 1536666..1537034 Rhodopseudomonas palustris DX-1 10063638 YP_004107793.1 CDS Rpdx1_1438 NC_014834.1 1537141 1537512 R KEGG: nha:Nham_1340 hypothetical protein; hypothetical protein complement(1537141..1537512) Rhodopseudomonas palustris DX-1 10063639 YP_004107794.1 CDS Rpdx1_1439 NC_014834.1 1537694 1538185 R KEGG: nwi:Nwi_1109 hypothetical protein; hypothetical protein complement(1537694..1538185) Rhodopseudomonas palustris DX-1 10063640 YP_004107795.1 CDS Rpdx1_1440 NC_014834.1 1538205 1538540 R PFAM: Flagellar protein FlgJ-like; KEGG: nwi:Nwi_1110 chemotactic signal-response protein CheL; flagellar protein FlgJ-like protein complement(1538205..1538540) Rhodopseudomonas palustris DX-1 10063641 YP_004107796.1 CDS Rpdx1_1441 NC_014834.1 1538540 1539661 R PFAM: flagellar P-ring protein; KEGG: bbt:BBta_5520 flagellar basal body P-ring protein; flagellar P-ring protein complement(1538540..1539661) Rhodopseudomonas palustris DX-1 10063642 YP_004107797.1 CDS Rpdx1_1442 NC_014834.1 1539959 1540369 D PFAM: Flagellar assembly regulator FliX, class II; KEGG: bja:bll5837 flagellar assembly regulator FliX; flagellar assembly regulator FliX, class II 1539959..1540369 Rhodopseudomonas palustris DX-1 10063643 YP_004107798.1 CDS Rpdx1_1443 NC_014834.1 1540508 1540918 D manually curated; TIGRFAM: RNA polymerase-binding protein DksA; KEGG: nha:Nham_1346 TraR/DksA family transcriptional regulator; PFAM: zinc finger DksA/TraR C4-type; TraR/DksA family transcriptional regulator 1540508..1540918 Rhodopseudomonas palustris DX-1 10063644 YP_004107799.1 CDS Rpdx1_1444 NC_014834.1 1541031 1541318 R KEGG: nha:Nham_0415 hypothetical protein; hypothetical protein complement(1541031..1541318) Rhodopseudomonas palustris DX-1 10063645 YP_004107800.1 CDS Rpdx1_1445 NC_014834.1 1541513 1542076 R PFAM: regulatory protein TetR; KEGG: atc:AGR_C_4219 hypothetical protein; regulatory protein TetR complement(1541513..1542076) Rhodopseudomonas palustris DX-1 10063646 YP_004107801.1 CDS Rpdx1_1446 NC_014834.1 1542225 1543418 D KEGG: rhi:NGR_c35220 putative efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1542225..1543418 Rhodopseudomonas palustris DX-1 10063647 YP_004107802.1 CDS Rpdx1_1447 NC_014834.1 1543431 1546583 D KEGG: atc:AGR_L_3217 RND multidrug efflux transporter MexD; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1543431..1546583 Rhodopseudomonas palustris DX-1 10063648 YP_004107803.1 CDS Rpdx1_1448 NC_014834.1 1546777 1547535 R PFAM: flagellar L-ring protein; KEGG: nha:Nham_1381 flagellar basal body L-ring protein; flagellar L-ring protein complement(1546777..1547535) Rhodopseudomonas palustris DX-1 10063649 YP_004107804.1 CDS Rpdx1_1449 NC_014834.1 1547541 1548572 R KEGG: nha:Nham_1382 flagellar basal body P-ring biosynthesis protein FlgA; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; flagella basal body P-ring formation protein FlgA complement(1547541..1548572) Rhodopseudomonas palustris DX-1 10063650 YP_004107805.1 CDS Rpdx1_1450 NC_014834.1 1548585 1549373 R KEGG: nha:Nham_1383 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgG complement(1548585..1549373) Rhodopseudomonas palustris DX-1 10063651 YP_004107806.1 CDS Rpdx1_1451 NC_014834.1 1549386 1550147 R KEGG: nha:Nham_1384 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgF complement(1549386..1550147) Rhodopseudomonas palustris DX-1 10063652 YP_004107807.1 CDS Rpdx1_1452 NC_014834.1 1550513 1551013 D PFAM: flagellar basal body-associated protein FliL; KEGG: bbt:BBta_5508 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 1550513..1551013 Rhodopseudomonas palustris DX-1 10063653 YP_004107808.1 CDS Rpdx1_1453 NC_014834.1 1551021 1552223 D KEGG: nwi:Nwi_1124 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM 1551021..1552223 Rhodopseudomonas palustris DX-1 10063654 YP_004107809.1 CDS Rpdx1_1454 NC_014834.1 1552220 1552645 D KEGG: bja:bll5824 hypothetical protein; hypothetical protein 1552220..1552645 Rhodopseudomonas palustris DX-1 10063655 YP_004107810.1 CDS Rpdx1_1455 NC_014834.1 1552642 1553403 D KEGG: nha:Nham_1388 hypothetical protein; hypothetical protein 1552642..1553403 Rhodopseudomonas palustris DX-1 10063656 YP_004107811.1 CDS Rpdx1_1456 NC_014834.1 1553417 1553746 R KEGG: bja:blr5534 hypothetical protein; hypothetical protein complement(1553417..1553746) Rhodopseudomonas palustris DX-1 10063657 YP_004107812.1 CDS Rpdx1_1457 NC_014834.1 1554204 1558004 D KEGG: nha:Nham_1389 tetratricopeptide TPR_4 protein; tetratricopeptide-repeat containing protein 1554204..1558004 Rhodopseudomonas palustris DX-1 10063658 YP_004107813.1 CDS Rpdx1_1458 NC_014834.1 1558162 1558929 R manually curated; TIGRFAM: flagellar biosynthetic protein FliP; KEGG: nha:Nham_1390 flagellar biosynthesis protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP complement(1558162..1558929) Rhodopseudomonas palustris DX-1 10063659 YP_004107814.1 CDS Rpdx1_1459 NC_014834.1 1558904 1560058 R KEGG: bbt:BBta_5498 hypothetical protein; hypothetical protein complement(1558904..1560058) Rhodopseudomonas palustris DX-1 10063660 YP_004107815.1 CDS Rpdx1_1460 NC_014834.1 1560382 1560792 D PFAM: flagellar basal body rod protein; KEGG: bra:BRADO5029 flagellar basal body rod protein FlgB; flagellar basal body rod protein 1560382..1560792 Rhodopseudomonas palustris DX-1 10063661 YP_004107816.1 CDS Rpdx1_1461 NC_014834.1 1560816 1561241 D KEGG: bja:bll5813 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgC 1560816..1561241 Rhodopseudomonas palustris DX-1 10063662 YP_004107817.1 CDS Rpdx1_1462 NC_014834.1 1561276 1561584 D PFAM: flagellar hook-basal body complex protein FliE; KEGG: bja:bll5812 flagellar hook-basal body protein FliE; flagellar hook-basal body complex protein FliE 1561276..1561584 Rhodopseudomonas palustris DX-1 10063663 YP_004107818.1 CDS Rpdx1_1463 NC_014834.1 1561747 1562010 D PFAM: export protein FliQ family 3; KEGG: nwi:Nwi_1135 flagellar biosynthesis protein FliQ; export protein FliQ family 3 1561747..1562010 Rhodopseudomonas palustris DX-1 10063664 YP_004107819.1 CDS Rpdx1_1464 NC_014834.1 1562081 1562887 D KEGG: bja:bll5810 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 1562081..1562887 Rhodopseudomonas palustris DX-1 10063665 YP_004107820.1 CDS Rpdx1_1465 NC_014834.1 1562914 1563987 D KEGG: bra:BRADO5024 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; flagellar biosynthetic protein FlhB 1562914..1563987 Rhodopseudomonas palustris DX-1 10063666 YP_004107821.1 CDS Rpdx1_1466 NC_014834.1 1564097 1566742 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: nha:Nham_1398 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; multi-sensor hybrid histidine kinase 1564097..1566742 Rhodopseudomonas palustris DX-1 10063667 YP_004107822.1 CDS Rpdx1_1467 NC_014834.1 1566815 1567609 D PFAM: FRG domain protein; KEGG: pla:Plav_0332 FRG domain-containing protein; FRG domain-containing protein 1566815..1567609 Rhodopseudomonas palustris DX-1 10063668 YP_004107823.1 CDS Rpdx1_1468 NC_014834.1 1567606 1567977 D KEGG: mpo:Mpop_2510 hypothetical protein; hypothetical protein 1567606..1567977 Rhodopseudomonas palustris DX-1 10063669 YP_004107824.1 CDS Rpdx1_1469 NC_014834.1 1568118 1569194 D PFAM: import inner membrane translocase subunit Tim44; KEGG: bja:bll5807 hypothetical protein; import inner membrane translocase subunit Tim44 1568118..1569194 Rhodopseudomonas palustris DX-1 10063670 YP_004107825.1 CDS Rpdx1_1470 NC_014834.1 1569319 1570029 D PFAM: Glutathione S-transferase domain; KEGG: bja:bll5800 hypothetical protein; glutathione S-transferase domain-containing protein 1569319..1570029 Rhodopseudomonas palustris DX-1 10063671 YP_004107826.1 CDS Rpdx1_1471 NC_014834.1 1570186 1570545 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: nha:Nham_2565 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein complement(1570186..1570545) Rhodopseudomonas palustris DX-1 10063672 YP_004107827.1 CDS Rpdx1_1472 NC_014834.1 1570686 1570856 R KEGG: dmo:Dmoj_GI10546 GI10546 gene product from transcript GI10546-RA; hypothetical protein complement(1570686..1570856) Rhodopseudomonas palustris DX-1 10063673 YP_004107828.1 CDS Rpdx1_1473 NC_014834.1 1571052 1571549 R KEGG: nha:Nham_2563 hypothetical protein; hypothetical protein complement(1571052..1571549) Rhodopseudomonas palustris DX-1 10063674 YP_004107829.1 CDS Rpdx1_1474 NC_014834.1 1571672 1571905 D manually curated; KEGG: xau:Xaut_3830 hypothetical protein; hypothetical protein 1571672..1571905 Rhodopseudomonas palustris DX-1 10063675 YP_004107830.1 CDS Rpdx1_1475 NC_014834.1 1571902 1572186 D PFAM: plasmid stabilization system; KEGG: sme:SMa0473 hypothetical protein; plasmid stabilization system 1571902..1572186 Rhodopseudomonas palustris DX-1 10063676 YP_004107831.1 CDS Rpdx1_1476 NC_014834.1 1572291 1573961 D KEGG: bja:bll5796 fumarate hydratase class I; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 1572291..1573961 Rhodopseudomonas palustris DX-1 10063677 YP_004107832.1 CDS Rpdx1_1478 NC_014834.1 1574426 1575097 D KEGG: cpc:Cpar_0295 hypothetical protein; hypothetical protein 1574426..1575097 Rhodopseudomonas palustris DX-1 10063679 YP_004107833.1 CDS Rpdx1_1479 NC_014834.1 1575310 1575606 R KEGG: bbt:BBta_5480 hypothetical protein; hypothetical protein complement(1575310..1575606) Rhodopseudomonas palustris DX-1 10063680 YP_004107834.1 CDS Rpdx1_1480 NC_014834.1 1575869 1576576 D KEGG: sus:Acid_6846 NHL repeat-containing protein; hypothetical protein 1575869..1576576 Rhodopseudomonas palustris DX-1 10063681 YP_004107835.1 CDS Rpdx1_1481 NC_014834.1 1576581 1577165 R KEGG: bja:blr5793 hypothetical protein; hypothetical protein complement(1576581..1577165) Rhodopseudomonas palustris DX-1 10063682 YP_004107836.1 CDS Rpdx1_1482 NC_014834.1 1577306 1577935 R KEGG: bja:blr5788 hypothetical protein; hypothetical protein complement(1577306..1577935) Rhodopseudomonas palustris DX-1 10063683 YP_004107837.1 CDS Rpdx1_1483 NC_014834.1 1578093 1578842 D KEGG: bbt:BBta_5473 histone-lysine N-methyltransferase; PFAM: nuclear protein SET; SMART: nuclear protein SET; nuclear protein SET 1578093..1578842 Rhodopseudomonas palustris DX-1 10063684 YP_004107838.1 CDS Rpdx1_1484 NC_014834.1 1578962 1579312 R KEGG: bra:BRADO5003 hypothetical protein; hypothetical protein complement(1578962..1579312) Rhodopseudomonas palustris DX-1 10063685 YP_004107839.1 CDS Rpdx1_1485 NC_014834.1 1579513 1580334 D KEGG: bbt:BBta_5469 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1579513..1580334 Rhodopseudomonas palustris DX-1 10063686 YP_004107840.1 CDS Rpdx1_1486 NC_014834.1 1580407 1581072 D PFAM: DSBA oxidoreductase; KEGG: bbt:BBta_5468 hypothetical protein; DSBA oxidoreductase 1580407..1581072 Rhodopseudomonas palustris DX-1 10063687 YP_004107841.1 CDS Rpdx1_1487 NC_014834.1 1581073 1582293 R KEGG: nwi:Nwi_1273 hypothetical protein; hypothetical protein complement(1581073..1582293) Rhodopseudomonas palustris DX-1 10063688 YP_004107842.1 CDS Rpdx1_1488 NC_014834.1 1582469 1583929 D PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: nwi:Nwi_1274 peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 1582469..1583929 Rhodopseudomonas palustris DX-1 10063689 YP_004107843.1 CDS Rpdx1_1489 NC_014834.1 1583995 1584456 R PFAM: thioesterase superfamily protein; KEGG: bja:blr5765 hypothetical protein; thioesterase superfamily protein complement(1583995..1584456) Rhodopseudomonas palustris DX-1 10063690 YP_004107844.1 CDS Rpdx1_1490 NC_014834.1 1584583 1584711 D KEGG: tfu:Tfu_1773 FKBP-type peptidyl-prolyl cis-trans isomerase 1; FKBP-type peptidyl-prolyl cis-trans isomerase 1 1584583..1584711 Rhodopseudomonas palustris DX-1 10063691 YP_004107845.1 CDS Rpdx1_1491 NC_014834.1 1584753 1585019 D KEGG: nha:Nham_1522 hypothetical protein; hypothetical protein 1584753..1585019 Rhodopseudomonas palustris DX-1 10063692 YP_004107846.1 CDS Rpdx1_1492 NC_014834.1 1585178 1585855 D KEGG: bja:bll2244 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 1585178..1585855 Rhodopseudomonas palustris DX-1 10063693 YP_004107847.1 CDS Rpdx1_1493 NC_014834.1 1585878 1586060 R manually curated; KEGG: bbt:BBta_5457 hypothetical protein; hypothetical protein complement(1585878..1586060) Rhodopseudomonas palustris DX-1 10063694 YP_004107848.1 CDS Rpdx1_1494 NC_014834.1 1586325 1586711 R KEGG: met:M446_4370 triple helix repeat-containing collagen; triple helix repeat-containing collagen complement(1586325..1586711) Rhodopseudomonas palustris DX-1 10063695 YP_004107849.1 CDS Rpdx1_1495 NC_014834.1 1586793 1587587 D KEGG: oaa:100075123 similar to splicing coactivator subunit SRm300; hypothetical protein 1586793..1587587 Rhodopseudomonas palustris DX-1 10063696 YP_004107850.1 CDS Rpdx1_1496 NC_014834.1 1587637 1587825 D KEGG: nml:Namu_4871 major facilitator superfamily MFS_1; major facilitator superfamily protein 1587637..1587825 Rhodopseudomonas palustris DX-1 10063697 YP_004107851.1 CDS Rpdx1_1497 NC_014834.1 1587841 1588098 R KEGG: nha:Nham_4592 hypothetical protein; hypothetical protein complement(1587841..1588098) Rhodopseudomonas palustris DX-1 10063698 YP_004107852.1 CDS Rpdx1_1498 NC_014834.1 1588348 1589439 D TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: nha:Nham_1616 recombinase A; SMART: AAA ATPase; recA protein 1588348..1589439 Rhodopseudomonas palustris DX-1 10063699 YP_004107853.1 CDS Rpdx1_1499 NC_014834.1 1589706 1592612 R KEGG: bja:blr5753 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like; aromatic amino acid beta-eliminating lyase/threonine aldolase; glycine dehydrogenase complement(1589706..1592612) Rhodopseudomonas palustris DX-1 10063700 YP_004107854.1 CDS Rpdx1_1500 NC_014834.1 1592780 1593145 R KEGG: bra:BRADO4983 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein complement(1592780..1593145) Rhodopseudomonas palustris DX-1 10063701 YP_004107855.1 CDS Rpdx1_1501 NC_014834.1 1593155 1594303 R KEGG: bja:blr5751 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; glycine cleavage system T protein complement(1593155..1594303) Rhodopseudomonas palustris DX-1 10063702 YP_004107856.1 CDS Rpdx1_1502 NC_014834.1 1594771 1597443 D KEGG: bja:bll5750 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; alanyl-tRNA synthetase 1594771..1597443 Rhodopseudomonas palustris DX-1 10063703 YP_004107857.1 CDS Rpdx1_1503 NC_014834.1 1597457 1598200 D PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_3334 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1597457..1598200 Rhodopseudomonas palustris DX-1 10063704 YP_004107858.1 CDS Rpdx1_1504 NC_014834.1 1598362 1600134 R PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: kefC2; glutathione-regulated potassium-efflux system protein KefC-2; sodium/hydrogen exchanger complement(1598362..1600134) Rhodopseudomonas palustris DX-1 10063705 YP_004107859.1 CDS Rpdx1_1505 NC_014834.1 1600293 1602050 D KEGG: oca:OCAR_5438 inner membrane protein YbaL; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein 1600293..1602050 Rhodopseudomonas palustris DX-1 10063706 YP_004107860.1 CDS Rpdx1_1506 NC_014834.1 1602080 1603183 R KEGG: pfl:PFL_3499 PepSY-associated membrane protein; hypothetical protein complement(1602080..1603183) Rhodopseudomonas palustris DX-1 10063707 YP_004107861.1 CDS Rpdx1_1507 NC_014834.1 1603183 1603713 R KEGG: ssl:SS1G_01630 hypothetical protein; hypothetical protein complement(1603183..1603713) Rhodopseudomonas palustris DX-1 10063708 YP_004107862.1 CDS Rpdx1_1508 NC_014834.1 1603732 1606041 R KEGG: pfl:PFL_3498 outer membrane ferripyochelin receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor complement(1603732..1606041) Rhodopseudomonas palustris DX-1 10063709 YP_004107863.1 CDS Rpdx1_1509 NC_014834.1 1606182 1607021 R KEGG: pag:PLES_07001 transcriptional regulator PchR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(1606182..1607021) Rhodopseudomonas palustris DX-1 10063710 YP_004107864.1 CDS Rpdx1_1510 NC_014834.1 1607174 1607506 R PFAM: protein of unknown function UPF0060; KEGG: oca:OCAR_5428 membrane protein; hypothetical protein complement(1607174..1607506) Rhodopseudomonas palustris DX-1 10063711 YP_004107865.1 CDS Rpdx1_1511 NC_014834.1 1607638 1608864 R TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: bja:blr5747 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase complement(1607638..1608864) Rhodopseudomonas palustris DX-1 10063712 YP_004107866.1 CDS Rpdx1_1512 NC_014834.1 1609256 1610458 D KEGG: bja:bll5746 tRNA/rRNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); TrmH family RNA methyltransferase 1609256..1610458 Rhodopseudomonas palustris DX-1 10063713 YP_004107867.1 CDS Rpdx1_1513 NC_014834.1 1610535 1610936 D PFAM: Protein of unknown function DUF2147; KEGG: bbt:BBta_5701 hypothetical protein; hypothetical protein 1610535..1610936 Rhodopseudomonas palustris DX-1 10063714 YP_004107868.1 CDS Rpdx1_1514 NC_014834.1 1610970 1611473 D KEGG: dge:Dgeo_1718 uracil-DNA glycosylase superfamily protein; uracil-DNA glycosylase superfamily protein 1610970..1611473 Rhodopseudomonas palustris DX-1 10063715 YP_004107869.1 CDS Rpdx1_1515 NC_014834.1 1611492 1612016 D PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bja:bll7224 transcription elongation factor regulatory protein; GreA/GreB family elongation factor 1611492..1612016 Rhodopseudomonas palustris DX-1 10063716 YP_004107870.1 CDS Rpdx1_1516 NC_014834.1 1612098 1612739 R KEGG: bte:BTH_II1885 ImcF-like family protein; hypothetical protein complement(1612098..1612739) Rhodopseudomonas palustris DX-1 10063717 YP_004107871.1 CDS Rpdx1_1518 NC_014834.1 1613781 1614602 D KEGG: oca:OCAR_5717 PEP phosphonomutase; PEP phosphonomutase 1613781..1614602 Rhodopseudomonas palustris DX-1 10063719 YP_004107872.1 CDS Rpdx1_1519 NC_014834.1 1614780 1615838 R KEGG: cak:Caul_0007 putative DNA-binding protein; putative DNA-binding protein complement(1614780..1615838) Rhodopseudomonas palustris DX-1 10063720 YP_004107873.1 CDS Rpdx1_1520 NC_014834.1 1616073 1616747 R KEGG: oca:OCAR_5446 hypothetical protein; hypothetical protein complement(1616073..1616747) Rhodopseudomonas palustris DX-1 10063721 YP_004107874.1 CDS Rpdx1_1521 NC_014834.1 1617253 1617576 R PFAM: protein of unknown function DUF1476; KEGG: nha:Nham_1632 hypothetical protein; hypothetical protein complement(1617253..1617576) Rhodopseudomonas palustris DX-1 10063722 YP_004107875.1 CDS Rpdx1_1522 NC_014834.1 1617846 1618643 D TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: oca:OCAR_5449 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1617846..1618643 Rhodopseudomonas palustris DX-1 10063723 YP_004107876.1 CDS Rpdx1_1523 NC_014834.1 1618833 1619078 D KEGG: oca:OCAR_5450 phosphoribosylformylglycinamidine synthase subunit PurS; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; phosphoribosylformylglycinamidine synthase PurS 1618833..1619078 Rhodopseudomonas palustris DX-1 10063724 YP_004107877.1 CDS Rpdx1_1524 NC_014834.1 1619102 1619341 D KEGG: bra:BRADO2778 hypothetical protein; hypothetical protein 1619102..1619341 Rhodopseudomonas palustris DX-1 10063725 YP_004107878.1 CDS Rpdx1_1525 NC_014834.1 1619398 1620099 D TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: nwi:Nwi_1306 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; phosphoribosylformylglycinamidine synthase I 1619398..1620099 Rhodopseudomonas palustris DX-1 10063726 YP_004107879.1 CDS Rpdx1_1526 NC_014834.1 1620424 1621731 R KEGG: bra:BRADO2830 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase-like; fumarate lyase; adenylosuccinate lyase complement(1620424..1621731) Rhodopseudomonas palustris DX-1 10063727 YP_004107880.1 CDS Rpdx1_1527 NC_014834.1 1622032 1622670 D KEGG: mdo:100022100 similar to plasma phospholipid transfer protein; hypothetical protein 1622032..1622670 Rhodopseudomonas palustris DX-1 10063728 YP_004107881.1 CDS Rpdx1_1528 NC_014834.1 1622667 1623365 R TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: bja:blr5680 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(1622667..1623365) Rhodopseudomonas palustris DX-1 10063729 YP_004107882.1 CDS Rpdx1_1529 NC_014834.1 1623633 1624397 D KEGG: bra:BRADO2843 hypothetical protein; PFAM: EF-Hand, Calmodulin; SMART: Calcium-binding EF-hand-containing protein; calmodulin 1623633..1624397 Rhodopseudomonas palustris DX-1 10063730 YP_004107883.1 CDS Rpdx1_1530 NC_014834.1 1624387 1625385 R PFAM: peptidase S58 DmpA; KEGG: nwi:Nwi_2215 peptidase S58, DmpA; peptidase S58 DmpA complement(1624387..1625385) Rhodopseudomonas palustris DX-1 10063731 YP_004107884.1 CDS Rpdx1_1531 NC_014834.1 1625531 1626265 D PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bja:blr2789 cytochrome c-type biogenesis protein; cytochrome c biogenesis transmembrane protein 1625531..1626265 Rhodopseudomonas palustris DX-1 10063732 YP_004107885.1 CDS Rpdx1_1532 NC_014834.1 1626520 1626807 D PFAM: Excinuclease ABC C subunit domain protein; KEGG: nha:Nham_1409 excinuclease ABC subunit C; excinuclease ABC subunit C domain-containing protein 1626520..1626807 Rhodopseudomonas palustris DX-1 10063733 YP_004107886.1 CDS Rpdx1_1533 NC_014834.1 1626876 1627982 R PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_5327 high-affinity branched-chain amino acid ABC transporter (substrate-binding protein); extracellular ligand-binding receptor complement(1626876..1627982) Rhodopseudomonas palustris DX-1 10063734 YP_004107887.1 CDS Rpdx1_1534 NC_014834.1 1628148 1628894 R KEGG: bbt:BBta_5326 high-affinity branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1628148..1628894) Rhodopseudomonas palustris DX-1 10063735 YP_004107888.1 CDS Rpdx1_1535 NC_014834.1 1629031 1629870 R KEGG: nwi:Nwi_2211 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1629031..1629870) Rhodopseudomonas palustris DX-1 10063736 YP_004107889.1 CDS Rpdx1_1536 NC_014834.1 1629867 1631195 R PFAM: inner-membrane translocator; KEGG: bbt:BBta_5324 high-affinity branched-chain amino acid ABC transporter (permease protein); inner-membrane translocator complement(1629867..1631195) Rhodopseudomonas palustris DX-1 10063737 YP_004107890.1 CDS Rpdx1_1537 NC_014834.1 1631208 1632125 R PFAM: inner-membrane translocator; KEGG: bbt:BBta_5323 high-affinity branched-chain amino acid ABC transporter (permease protein); inner-membrane translocator complement(1631208..1632125) Rhodopseudomonas palustris DX-1 10063738 YP_004107891.1 CDS Rpdx1_1538 NC_014834.1 1632764 1633288 D KEGG: nha:Nham_2610 hypothetical protein; hypothetical protein 1632764..1633288 Rhodopseudomonas palustris DX-1 10063739 YP_004107892.1 CDS Rpdx1_1539 NC_014834.1 1633482 1633946 D PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bja:bll5666 hypothetical protein; carbon monoxide dehydrogenase subunit G 1633482..1633946 Rhodopseudomonas palustris DX-1 10063740 YP_004107893.1 CDS Rpdx1_1540 NC_014834.1 1634121 1634606 D PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bra:BRADO2857 putative carbon-monoxide dehydrogenase small subunit, CoxS-like protein; (2Fe-2S)-binding domain-containing protein 1634121..1634606 Rhodopseudomonas palustris DX-1 10063741 YP_004107894.1 CDS Rpdx1_1541 NC_014834.1 1634682 1635488 D PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bja:bll5664 putative carbon monoxide dehydrogenase medium subunit; FAD-binding molybdopterin dehydrogenase protein 1634682..1635488 Rhodopseudomonas palustris DX-1 10063742 YP_004107895.1 CDS Rpdx1_1542 NC_014834.1 1635508 1636416 D KEGG: bbt:BBta_5316 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase 1635508..1636416 Rhodopseudomonas palustris DX-1 10063743 YP_004107896.1 CDS Rpdx1_1543 NC_014834.1 1636659 1637876 D PFAM: VWA containing CoxE family protein; KEGG: bja:bll5662 hypothetical protein; VWA containing CoxE family protein 1636659..1637876 Rhodopseudomonas palustris DX-1 10063744 YP_004107897.1 CDS Rpdx1_1544 NC_014834.1 1637912 1638238 D PFAM: protein of unknown function DUF182; KEGG: bja:bll5661 hypothetical protein; hypothetical protein 1637912..1638238 Rhodopseudomonas palustris DX-1 10063745 YP_004107898.1 CDS Rpdx1_1545 NC_014834.1 1638270 1638971 D KEGG: bbt:BBta_5313 sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis; sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis 1638270..1638971 Rhodopseudomonas palustris DX-1 10063746 YP_004107899.1 CDS Rpdx1_1546 NC_014834.1 1638968 1640569 D PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; molybdopterin binding domain; KEGG: bbt:BBta_5312 molybdenum cofactor cytidylyltransferase / molybdopterin molybdochelatase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1638968..1640569 Rhodopseudomonas palustris DX-1 10063747 YP_004107900.1 CDS Rpdx1_1547 NC_014834.1 1640580 1641410 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: swi:Swit_2160 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1640580..1641410) Rhodopseudomonas palustris DX-1 10063748 YP_004107901.1 CDS Rpdx1_1548 NC_014834.1 1641510 1642262 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sme:SMc01153 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 1641510..1642262 Rhodopseudomonas palustris DX-1 10063749 YP_004107902.1 CDS Rpdx1_1549 NC_014834.1 1642363 1642746 D KEGG: bja:bll5657 hypothetical protein; hypothetical protein 1642363..1642746 Rhodopseudomonas palustris DX-1 10063750 YP_004107903.1 CDS Rpdx1_1550 NC_014834.1 1642707 1642856 D hypothetical protein 1642707..1642856 Rhodopseudomonas palustris DX-1 10063751 YP_004107904.1 CDS Rpdx1_1551 NC_014834.1 1642867 1643043 R KEGG: bra:BRADO3443 hypothetical protein; hypothetical protein complement(1642867..1643043) Rhodopseudomonas palustris DX-1 10063752 YP_004107905.1 CDS Rpdx1_1552 NC_014834.1 1643312 1644385 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: fre:Franean1_4360 serine/threonine protein kinase; SMART: GGDEF domain containing protein; diguanylate cyclase 1643312..1644385 Rhodopseudomonas palustris DX-1 10063753 YP_004107906.1 CDS Rpdx1_1553 NC_014834.1 1644456 1645172 D PFAM: regulatory protein TetR; KEGG: nha:Nham_0716 TetR family transcriptional regulator; regulatory protein TetR 1644456..1645172 Rhodopseudomonas palustris DX-1 10063754 YP_004107907.1 CDS Rpdx1_1554 NC_014834.1 1645169 1645969 D PFAM: secretion protein HlyD family protein; KEGG: bja:bll5650 hypothetical protein; secretion protein HlyD family protein 1645169..1645969 Rhodopseudomonas palustris DX-1 10063755 YP_004107908.1 CDS Rpdx1_1555 NC_014834.1 1645966 1646919 D KEGG: bja:bll5649 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1645966..1646919 Rhodopseudomonas palustris DX-1 10063756 YP_004107909.1 CDS Rpdx1_1556 NC_014834.1 1646916 1648085 D PFAM: ABC-2 type transporter; KEGG: bbt:BBta_5303 putative ABC transporter (fused ATP-binding and permease components); ABC-2 type transporter 1646916..1648085 Rhodopseudomonas palustris DX-1 10063757 YP_004107910.1 CDS Rpdx1_1557 NC_014834.1 1648113 1649009 R KEGG: nha:Nham_2600 hypothetical protein; hypothetical protein complement(1648113..1649009) Rhodopseudomonas palustris DX-1 10063758 YP_004107911.1 CDS Rpdx1_1558 NC_014834.1 1649106 1649396 R KEGG: pam:PANA_0485 Tar; hypothetical protein complement(1649106..1649396) Rhodopseudomonas palustris DX-1 10063759 YP_004107912.1 CDS Rpdx1_1559 NC_014834.1 1649507 1650337 R PFAM: protein of unknown function DUF72; KEGG: bbt:BBta_5299 hypothetical protein; hypothetical protein complement(1649507..1650337) Rhodopseudomonas palustris DX-1 10063760 YP_004107913.1 CDS Rpdx1_1560 NC_014834.1 1650565 1651701 D KEGG: bbt:BBta_5297 putative dolichol-phosphate mannosyltransferase; PFAM: glycosyl transferase family 2; GtrA family protein; dolichyl-phosphate beta-D-mannosyltransferase 1650565..1651701 Rhodopseudomonas palustris DX-1 10063761 YP_004107914.1 CDS Rpdx1_1561 NC_014834.1 1651709 1653205 D KEGG: bja:bll5638 hypothetical protein; hypothetical protein 1651709..1653205 Rhodopseudomonas palustris DX-1 10063762 YP_004107915.1 CDS Rpdx1_1562 NC_014834.1 1653329 1654546 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nha:Nham_2703 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1653329..1654546 Rhodopseudomonas palustris DX-1 10063763 YP_004107916.1 CDS Rpdx1_1563 NC_014834.1 1654656 1655549 R PFAM: PfkB domain protein; KEGG: bra:BRADO2493 putative sugar kinase; PfkB domain-containing protein complement(1654656..1655549) Rhodopseudomonas palustris DX-1 10063764 YP_004107917.1 CDS Rpdx1_1564 NC_014834.1 1655887 1656759 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bra:BRADO2495 putative glyoxalase/bleomycin resistance protein/dioxygenase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 1655887..1656759 Rhodopseudomonas palustris DX-1 10063765 YP_004107918.1 CDS Rpdx1_1565 NC_014834.1 1656769 1658322 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr2248 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(1656769..1658322) Rhodopseudomonas palustris DX-1 10063766 YP_004107919.1 CDS Rpdx1_1566 NC_014834.1 1658493 1659713 R PFAM: cytochrome P450; KEGG: bja:bll2856 cytochrome P450; cytochrome P450 complement(1658493..1659713) Rhodopseudomonas palustris DX-1 10063767 YP_004107920.1 CDS Rpdx1_1567 NC_014834.1 1659970 1660671 D PFAM: regulatory protein TetR; KEGG: nha:Nham_2701 TetR family transcriptional regulator; regulatory protein TetR 1659970..1660671 Rhodopseudomonas palustris DX-1 10063768 YP_004107921.1 CDS Rpdx1_1568 NC_014834.1 1660673 1661866 D KEGG: nha:Nham_2700 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1660673..1661866 Rhodopseudomonas palustris DX-1 10063769 YP_004107922.1 CDS Rpdx1_1569 NC_014834.1 1661986 1665090 D PFAM: acriflavin resistance protein; KEGG: nwi:Nwi_2283 acriflavin resistance protein; acriflavin resistance protein 1661986..1665090 Rhodopseudomonas palustris DX-1 10063770 YP_004107923.1 CDS Rpdx1_1570 NC_014834.1 1665367 1666620 D KEGG: nha:Nham_2698 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; D-amino-acid dehydrogenase 1665367..1666620 Rhodopseudomonas palustris DX-1 10063771 YP_004107924.1 CDS Rpdx1_1571 NC_014834.1 1666710 1666964 D KEGG: bja:bsr2878 hypothetical protein; hypothetical protein 1666710..1666964 Rhodopseudomonas palustris DX-1 10063772 YP_004107925.1 CDS Rpdx1_1572 NC_014834.1 1666983 1667774 D KEGG: bja:blr2879 hypothetical protein; hypothetical protein 1666983..1667774 Rhodopseudomonas palustris DX-1 10063773 YP_004107926.1 CDS Rpdx1_1573 NC_014834.1 1667821 1668141 D KEGG: bbt:BBta_2862 hypothetical protein; hypothetical protein 1667821..1668141 Rhodopseudomonas palustris DX-1 10063774 YP_004107927.1 CDS Rpdx1_1574 NC_014834.1 1668355 1668858 D TIGRFAM: phasin; KEGG: bra:BRADO2517 hypothetical protein; phasin 1668355..1668858 Rhodopseudomonas palustris DX-1 10063775 YP_004107928.1 CDS Rpdx1_1575 NC_014834.1 1669085 1669759 R PFAM: regulatory protein TetR; KEGG: xau:Xaut_0894 TetR family transcriptional regulator; TetR family transcriptional regulator complement(1669085..1669759) Rhodopseudomonas palustris DX-1 10063776 YP_004107929.1 CDS Rpdx1_1576 NC_014834.1 1669882 1670865 D KEGG: bja:blr2891 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; phenylacetate-CoA oxygenase subunit PaaG 1669882..1670865 Rhodopseudomonas palustris DX-1 10063777 YP_004107930.1 CDS Rpdx1_1577 NC_014834.1 1670899 1671186 D KEGG: bra:BRADO2520 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; phenylacetate-CoA oxygenase subunit PaaH 1670899..1671186 Rhodopseudomonas palustris DX-1 10063778 YP_004107931.1 CDS Rpdx1_1578 NC_014834.1 1671350 1672120 D KEGG: bbt:BBta_2867 phenylacetic acid degradation protein PaaC; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; phenylacetate-CoA oxygenase subunit PaaI 1671350..1672120 Rhodopseudomonas palustris DX-1 10063779 YP_004107932.1 CDS Rpdx1_1579 NC_014834.1 1672117 1672617 D KEGG: bbt:BBta_2868 phenylacetic acid degradation protein PaaD; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; phenylacetate-CoA oxygenase subunit PaaJ 1672117..1672617 Rhodopseudomonas palustris DX-1 10063780 YP_004107933.1 CDS Rpdx1_1580 NC_014834.1 1672626 1673714 D KEGG: bja:blr2895 putative ferredoxin reductase electron transfer component protein; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; phenylacetate-CoA oxygenase/reductase subunit PaaK 1672626..1673714 Rhodopseudomonas palustris DX-1 10063781 YP_004107934.1 CDS Rpdx1_1581 NC_014834.1 1673869 1675494 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: bbt:BBta_2937 hypothetical protein; thiamine pyrophosphate domain-containing TPP-binding protein complement(1673869..1675494) Rhodopseudomonas palustris DX-1 10063782 YP_004107935.1 CDS Rpdx1_1582 NC_014834.1 1675523 1676395 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bra:BRADO2592 putative 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), bifunctional protein isomerase/decarboxylase HpcE-like; fumarylacetoacetate (FAA) hydrolase complement(1675523..1676395) Rhodopseudomonas palustris DX-1 10063783 YP_004107936.1 CDS Rpdx1_1583 NC_014834.1 1676550 1677527 R TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; KEGG: bja:bll2967 putative metapyrocatechase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3,4-dihydroxyphenylacetate 2,3-dioxygenase complement(1676550..1677527) Rhodopseudomonas palustris DX-1 10063784 YP_004107937.1 CDS Rpdx1_1584 NC_014834.1 1677697 1679238 R KEGG: bja:bll2968 NAD-dependent succinate aldehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase complement(1677697..1679238) Rhodopseudomonas palustris DX-1 10063785 YP_004107938.1 CDS Rpdx1_1585 NC_014834.1 1679231 1679629 R PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bbt:BBta_2940 putative 5-carboxymethyl-2-hydroxymuconate isomerase, HpcD-like protein; 5-carboxymethyl-2-hydroxymuconate isomerase complement(1679231..1679629) Rhodopseudomonas palustris DX-1 10063786 YP_004107939.1 CDS Rpdx1_1586 NC_014834.1 1679790 1680455 D TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bja:blr2971 transcriptional regulatory protein; SMART: regulatory protein MarR; homoprotocatechuate degradation operon regulator HpaR 1679790..1680455 Rhodopseudomonas palustris DX-1 10063787 YP_004107940.1 CDS Rpdx1_1587 NC_014834.1 1680496 1681581 D PFAM: Malate/L-lactate dehydrogenase; KEGG: bra:BRADO2597 hypothetical protein; malate/L-lactate dehydrogenase 1680496..1681581 Rhodopseudomonas palustris DX-1 10063788 YP_004107941.1 CDS Rpdx1_1588 NC_014834.1 1681581 1681709 D KEGG: bph:Bphy_1748 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 1681581..1681709 Rhodopseudomonas palustris DX-1 10063789 YP_004107942.1 CDS Rpdx1_1589 NC_014834.1 1681901 1682677 D KEGG: bra:BRADO2598 putative aldolase; PFAM: HpcH/HpaI aldolase; 4-hydroxy-2-oxovalerate aldolase 1681901..1682677 Rhodopseudomonas palustris DX-1 10063790 YP_004107943.1 CDS Rpdx1_1590 NC_014834.1 1682926 1684659 D KEGG: jan:Jann_3430 hypothetical protein; hypothetical protein 1682926..1684659 Rhodopseudomonas palustris DX-1 10063791 YP_004107944.1 CDS Rpdx1_1591 NC_014834.1 1684802 1688140 D KEGG: bbt:BBta_2947 hypothetical protein; PFAM: Protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; hypothetical protein 1684802..1688140 Rhodopseudomonas palustris DX-1 10063792 YP_004107945.1 CDS Rpdx1_1592 NC_014834.1 1688166 1690667 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; protein of unknown function DUF403; KEGG: bbt:BBta_2948 hypothetical protein; hypothetical protein 1688166..1690667 Rhodopseudomonas palustris DX-1 10063793 YP_004107946.1 CDS Rpdx1_1593 NC_014834.1 1690664 1691542 D KEGG: bra:BRADO2603 hypothetical protein; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; transglutaminase domain-containing protein 1690664..1691542 Rhodopseudomonas palustris DX-1 10063794 YP_004107947.1 CDS Rpdx1_1594 NC_014834.1 1691745 1692200 D PFAM: Cache type 2 domain protein; KEGG: dma:DMR_10750 hypothetical protein; Cache type 2 domain-containing protein 1691745..1692200 Rhodopseudomonas palustris DX-1 10063795 YP_004107948.1 CDS Rpdx1_1595 NC_014834.1 1692254 1693957 D KEGG: oca:OCAR_6729 methyl-accepting chemotaxis receptor/sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1692254..1693957 Rhodopseudomonas palustris DX-1 10063796 YP_004107949.1 CDS Rpdx1_1596 NC_014834.1 1694020 1695402 D KEGG: bja:blr2994 ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit; ethanolamine ammonia-lyase 1694020..1695402 Rhodopseudomonas palustris DX-1 10063797 YP_004107950.1 CDS Rpdx1_1597 NC_014834.1 1695627 1697213 D KEGG: bra:BRADO2623 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1695627..1697213 Rhodopseudomonas palustris DX-1 10063798 YP_004107951.1 CDS Rpdx1_1598 NC_014834.1 1697219 1697986 D KEGG: bja:blr2996 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain; ethanolamine ammonia-lyase 1697219..1697986 Rhodopseudomonas palustris DX-1 10063799 YP_004107952.1 CDS Rpdx1_1599 NC_014834.1 1698194 1700566 D KEGG: nha:Nham_2688 RND superfamily transporter; RND superfamily transporter 1698194..1700566 Rhodopseudomonas palustris DX-1 10063800 YP_004107953.1 CDS Rpdx1_1600 NC_014834.1 1700649 1701152 R KEGG: bra:BRADO2625 hypothetical protein; hypothetical protein complement(1700649..1701152) Rhodopseudomonas palustris DX-1 10063801 YP_004107954.1 CDS Rpdx1_1601 NC_014834.1 1701533 1701772 D KEGG: oca:OCAR_6662 hypothetical protein; hypothetical protein 1701533..1701772 Rhodopseudomonas palustris DX-1 10063802 YP_004107955.1 CDS Rpdx1_1602 NC_014834.1 1701984 1702862 D KEGG: bja:blr3001 hypothetical protein; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; squalene synthase 1701984..1702862 Rhodopseudomonas palustris DX-1 10063803 YP_004107956.1 CDS Rpdx1_1603 NC_014834.1 1702859 1703698 D TIGRFAM: squalene synthase HpnD; KEGG: bja:blr3002 putative phytoene synthase; PFAM: Squalene/phytoene synthase; squalene synthase 1702859..1703698 Rhodopseudomonas palustris DX-1 10063804 YP_004107957.1 CDS Rpdx1_1604 NC_014834.1 1703698 1704954 D KEGG: bja:blr3003 hypothetical protein; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; squalene-associated FAD-dependent desaturase 1703698..1704954 Rhodopseudomonas palustris DX-1 10063805 YP_004107958.1 CDS Rpdx1_1605 NC_014834.1 1704987 1706948 D TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; KEGG: bja:blr3004 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 1704987..1706948 Rhodopseudomonas palustris DX-1 10063806 YP_004107959.1 CDS Rpdx1_1606 NC_014834.1 1706945 1707688 D KEGG: nha:Nham_2681 hypothetical protein; TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1; hopanoid-associated phosphorylase 1706945..1707688 Rhodopseudomonas palustris DX-1 10063807 YP_004107960.1 CDS Rpdx1_1608 NC_014834.1 1708174 1709334 R KEGG: bja:bll3006 hypothetical protein; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; hopanoid biosynthesis associated radical SAM protein HpnH complement(1708174..1709334) Rhodopseudomonas palustris DX-1 10063809 YP_004107961.1 CDS Rpdx1_1609 NC_014834.1 1709376 1710320 R TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: nwi:Nwi_2266 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase complement(1709376..1710320) Rhodopseudomonas palustris DX-1 10063810 YP_004107962.1 CDS Rpdx1_1610 NC_014834.1 1710633 1713239 D TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: nwi:Nwi_2265 hypothetical protein; hopanoid biosynthesis associated RND transporter like protein HpnN 1710633..1713239 Rhodopseudomonas palustris DX-1 10063811 YP_004107963.1 CDS Rpdx1_1611 NC_014834.1 1713574 1714965 D PFAM: aminotransferase class-III; KEGG: bra:BRADO2635 putative aminotransferase; putative ornithine aminotransferase; class III aminotransferase 1713574..1714965 Rhodopseudomonas palustris DX-1 10063812 YP_004107964.1 CDS Rpdx1_1612 NC_014834.1 1715197 1716036 D PFAM: UspA domain protein; KEGG: msl:Msil_1452 UspA domain protein; UspA domain-containing protein 1715197..1716036 Rhodopseudomonas palustris DX-1 10063813 YP_004107965.1 CDS Rpdx1_1613 NC_014834.1 1716213 1716518 D PFAM: SpoVT/AbrB domain protein; KEGG: bbt:BBta_4599 putative nitrogen regulatory protein; SpoVT/AbrB domain-containing protein 1716213..1716518 Rhodopseudomonas palustris DX-1 10063814 YP_004107966.1 CDS Rpdx1_1614 NC_014834.1 1716529 1716936 D KEGG: bbt:BBta_4600 putative nitrogen regulatory protein (NtrR-like), putative virulence associated protein (vap); manually curated; PFAM: PilT protein domain protein; PilT domain-containing protein 1716529..1716936 Rhodopseudomonas palustris DX-1 10063815 YP_004107967.1 CDS Rpdx1_1615 NC_014834.1 1717043 1717429 D KEGG: gbe:GbCGDNIH1_1596 hypothetical protein; hypothetical protein 1717043..1717429 Rhodopseudomonas palustris DX-1 10063816 YP_004107968.1 CDS Rpdx1_1616 NC_014834.1 1717469 1718923 D KEGG: rci:RCIX1317 type I restriction modification system, methyltransferase subunit; PFAM: N-6 DNA methylase; adenine-specific DNA-methyltransferase 1717469..1718923 Rhodopseudomonas palustris DX-1 10063817 YP_004107969.1 CDS Rpdx1_1618 NC_014834.1 1719500 1721119 R PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: xau:Xaut_3245 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(1719500..1721119) Rhodopseudomonas palustris DX-1 10063819 YP_004107970.1 CDS Rpdx1_1619 NC_014834.1 1721244 1722416 D TIGRFAM: amidohydrolase; KEGG: nha:Nham_2671 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1721244..1722416 Rhodopseudomonas palustris DX-1 10063820 YP_004107971.1 CDS Rpdx1_1620 NC_014834.1 1722365 1722538 R KEGG: oca:OCAR_5169 metallophosphoesterase; hypothetical protein complement(1722365..1722538) Rhodopseudomonas palustris DX-1 10063821 YP_004107972.1 CDS Rpdx1_1621 NC_014834.1 1722560 1724650 R PFAM: Carbohydrate-selective porin OprB; KEGG: bbt:BBta_3415 putative outer membrane protein of unknown function; carbohydrate-selective porin OprB complement(1722560..1724650) Rhodopseudomonas palustris DX-1 10063822 YP_004107973.1 CDS Rpdx1_1622 NC_014834.1 1724745 1725794 R PFAM: Mg2 transporter protein CorA family protein; KEGG: bra:BRADO6358 putative divalent cation transporter, CorA-like; Mg2 transporter protein CorA family protein complement(1724745..1725794) Rhodopseudomonas palustris DX-1 10063823 YP_004107974.1 CDS Rpdx1_1623 NC_014834.1 1726044 1726544 D PFAM: protein of unknown function DUF892; KEGG: nha:Nham_2670 hypothetical protein; hypothetical protein 1726044..1726544 Rhodopseudomonas palustris DX-1 10063824 YP_004107975.1 CDS Rpdx1_1624 NC_014834.1 1726634 1727863 R PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7829 hypothetical protein; extracellular ligand-binding receptor complement(1726634..1727863) Rhodopseudomonas palustris DX-1 10063825 YP_004107976.1 CDS Rpdx1_1625 NC_014834.1 1728213 1729448 R PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7827 ABC transporter substrate-binding protein; extracellular ligand-binding receptor complement(1728213..1729448) Rhodopseudomonas palustris DX-1 10063826 YP_004107977.1 CDS Rpdx1_1626 NC_014834.1 1729630 1730853 R PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_7080 branched chain amino acid ABC transporter periplasmic-binding protein; extracellular ligand-binding receptor complement(1729630..1730853) Rhodopseudomonas palustris DX-1 10063827 YP_004107978.1 CDS Rpdx1_1627 NC_014834.1 1731090 1732109 R PFAM: inner-membrane translocator; KEGG: bra:BRADO0976 high-affinity branched-chain amino acid ABC transporter permease; inner-membrane translocator complement(1731090..1732109) Rhodopseudomonas palustris DX-1 10063828 YP_004107979.1 CDS Rpdx1_1628 NC_014834.1 1732112 1732990 R PFAM: inner-membrane translocator; KEGG: bbt:BBta_7078 putative high-affinity branched-chain amino acid transport system permease protein LivH; inner-membrane translocator complement(1732112..1732990) Rhodopseudomonas palustris DX-1 10063829 YP_004107980.1 CDS Rpdx1_1629 NC_014834.1 1733002 1733715 R KEGG: bja:blr7824 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1733002..1733715) Rhodopseudomonas palustris DX-1 10063830 YP_004107981.1 CDS Rpdx1_1630 NC_014834.1 1733712 1734512 R KEGG: bja:blr7823 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1733712..1734512) Rhodopseudomonas palustris DX-1 10063831 YP_004107982.1 CDS Rpdx1_1631 NC_014834.1 1734543 1735409 R KEGG: bja:blr7822 transcriptional regulatory protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator complement(1734543..1735409) Rhodopseudomonas palustris DX-1 10063832 YP_004107983.1 CDS Rpdx1_1632 NC_014834.1 1735541 1737640 D PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bja:bll7821 fatty oxidation complex alpha subunit; NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein 1735541..1737640 Rhodopseudomonas palustris DX-1 10063833 YP_004107984.1 CDS Rpdx1_1634 NC_014834.1 1737807 1739465 D KEGG: bra:BRADO0982 putative long-chain-fatty-acid--CoA ligase; putative long-chain acyl-CoA synthetase; pimeloyl-CoA ligase PimA; TIGRFAM: dicarboxylate/CoA ligase PimA; PFAM: AMP-dependent synthetase and ligase; dicarboxylate/CoA ligase PimA 1737807..1739465 Rhodopseudomonas palustris DX-1 10063835 YP_004107985.1 CDS Rpdx1_1635 NC_014834.1 1739497 1740684 D TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bbt:BBta_7072 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 1739497..1740684 Rhodopseudomonas palustris DX-1 10063836 YP_004107986.1 CDS Rpdx1_1636 NC_014834.1 1740844 1742034 D KEGG: bra:BRADO0984 putative acyl-CoA dehydrogenase; pimeloyl-CoA dehydrogenase PimC (large subunit); TIGRFAM: pimeloyl-CoA dehydrogenase, large subunit; PFAM: acyl-CoA dehydrogenase domain protein; pimeloyl-CoA dehydrogenase large subunit 1740844..1742034 Rhodopseudomonas palustris DX-1 10063837 YP_004107987.1 CDS Rpdx1_1637 NC_014834.1 1742202 1743344 D KEGG: bra:BRADO0985 putative acyl-CoA dehydrogenase; pimeloyl-CoA dehydrogenase PimD (small subunit); TIGRFAM: pimeloyl-CoA dehydrogenase, small subunit; PFAM: acyl-CoA dehydrogenase domain protein; pimeloyl-CoA dehydrogenase small subunit 1742202..1743344 Rhodopseudomonas palustris DX-1 10063838 YP_004107988.1 CDS Rpdx1_1638 NC_014834.1 1743478 1744251 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_7068 SDR family dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 1743478..1744251 Rhodopseudomonas palustris DX-1 10063839 YP_004107989.1 CDS Rpdx1_1639 NC_014834.1 1744396 1746015 R PFAM: FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bra:BRADO3794 sulfite reductase; FAD-binding domain-containing protein complement(1744396..1746015) Rhodopseudomonas palustris DX-1 10063840 YP_004107990.1 CDS Rpdx1_1640 NC_014834.1 1746012 1747784 R KEGG: bra:BRADO3793 ferredoxin-nitrite reductase; TIGRFAM: precorrin-3B synthase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; precorrin-3B synthase complement(1746012..1747784) Rhodopseudomonas palustris DX-1 10063841 YP_004107991.1 CDS Rpdx1_1641 NC_014834.1 1747827 1748249 R PFAM: globin; KEGG: azc:AZC_0683 putative hemoprotein; globin complement(1747827..1748249) Rhodopseudomonas palustris DX-1 10063842 YP_004107992.1 CDS Rpdx1_1642 NC_014834.1 1748607 1749047 R PFAM: globin; KEGG: bbt:BBta_3847 putative globin-like protein; globin complement(1748607..1749047) Rhodopseudomonas palustris DX-1 10063843 YP_004107993.1 CDS Rpdx1_1643 NC_014834.1 1749068 1750228 R KEGG: bja:bll4572 putative nitrate transport protein; putative nitrate transport protein complement(1749068..1750228) Rhodopseudomonas palustris DX-1 10063844 YP_004107994.1 CDS Rpdx1_1644 NC_014834.1 1750225 1750377 R KEGG: nwi:Nwi_1288 hypothetical protein; hypothetical protein complement(1750225..1750377) Rhodopseudomonas palustris DX-1 10063845 YP_004107995.1 CDS Rpdx1_1645 NC_014834.1 1750374 1750958 R PFAM: ANTAR domain protein; response regulator receiver; KEGG: bja:bll4573 two-component response regulator; response regulator receiver and ANTAR domain-containing protein complement(1750374..1750958) Rhodopseudomonas palustris DX-1 10063846 YP_004107996.1 CDS Rpdx1_1646 NC_014834.1 1751167 1752669 D KEGG: bbt:BBta_7067 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; glycerol kinase 1751167..1752669 Rhodopseudomonas palustris DX-1 10063847 YP_004107997.1 CDS Rpdx1_1647 NC_014834.1 1752687 1752923 D KEGG: spe:Spro_4104 hypothetical protein; hypothetical protein 1752687..1752923 Rhodopseudomonas palustris DX-1 10063848 YP_004107998.1 CDS Rpdx1_1648 NC_014834.1 1752904 1753167 D KEGG: tgr:Tgr7_2980 hypothetical protein; hypothetical protein 1752904..1753167 Rhodopseudomonas palustris DX-1 10063849 YP_004107999.1 CDS Rpdx1_1649 NC_014834.1 1753309 1753941 D PFAM: Glutathione S-transferase domain; KEGG: bja:blr1415 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein 1753309..1753941 Rhodopseudomonas palustris DX-1 10063850 YP_004108000.1 CDS Rpdx1_1650 NC_014834.1 1754732 1758613 R KEGG: bra:BRADO0994 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; methionine synthase complement(1754732..1758613) Rhodopseudomonas palustris DX-1 10063851 YP_004108001.1 CDS Rpdx1_1651 NC_014834.1 1758625 1759026 R KEGG: spe:Spro_1572 hypothetical protein; hypothetical protein complement(1758625..1759026) Rhodopseudomonas palustris DX-1 10063852 YP_004108002.1 CDS Rpdx1_1652 NC_014834.1 1759110 1759997 R TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: bbt:BBta_7060 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase complement(1759110..1759997) Rhodopseudomonas palustris DX-1 10063853 YP_004108003.1 CDS Rpdx1_1653 NC_014834.1 1760401 1761423 D KEGG: bja:blr1420 flavin dependant oxidoreductase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; luciferase family oxidoreductase 1760401..1761423 Rhodopseudomonas palustris DX-1 10063854 YP_004108004.1 CDS Rpdx1_1654 NC_014834.1 1761537 1762391 R KEGG: bbt:BBta_7058 prephenate dehydratase; PFAM: prephenate dehydratase; Prephenate dehydratase complement(1761537..1762391) Rhodopseudomonas palustris DX-1 10063855 YP_004108005.1 CDS Rpdx1_1655 NC_014834.1 1762451 1763188 R TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: nha:Nham_0376 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(1762451..1763188) Rhodopseudomonas palustris DX-1 10063856 YP_004108006.1 CDS Rpdx1_1656 NC_014834.1 1763416 1763970 D PFAM: cytochrome c class I; KEGG: bja:blr1423 cytochrome c; cytochrome c class I 1763416..1763970 Rhodopseudomonas palustris DX-1 10063857 YP_004108007.1 CDS Rpdx1_1657 NC_014834.1 1764182 1766077 D PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_7055 oligopeptide ABC transporter periplasmic substrate-binding protein; family 5 extracellular solute-binding protein 1764182..1766077 Rhodopseudomonas palustris DX-1 10063858 YP_004108008.1 CDS Rpdx1_1658 NC_014834.1 1766092 1767945 D PFAM: extracellular solute-binding protein family 5; KEGG: nha:Nham_0379 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1766092..1767945 Rhodopseudomonas palustris DX-1 10063859 YP_004108009.1 CDS Rpdx1_1659 NC_014834.1 1767947 1769056 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nha:Nham_0380 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 1767947..1769056 Rhodopseudomonas palustris DX-1 10063860 YP_004108010.1 CDS Rpdx1_1660 NC_014834.1 1769056 1770234 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nwi:Nwi_0291 binding-protein dependent transport system inner membrane protein; binding-protein-dependent transporter inner membrane component 1769056..1770234 Rhodopseudomonas palustris DX-1 10063861 YP_004108011.1 CDS Rpdx1_1661 NC_014834.1 1770240 1771877 D KEGG: nwi:Nwi_0292 ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter-like protein 1770240..1771877 Rhodopseudomonas palustris DX-1 10063862 YP_004108012.1 CDS Rpdx1_1662 NC_014834.1 1771885 1772523 D PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2637 NUDIX hydrolase; NUDIX hydrolase 1771885..1772523 Rhodopseudomonas palustris DX-1 10063863 YP_004108013.1 CDS Rpdx1_1663 NC_014834.1 1772507 1773364 R PFAM: NLP/P60 protein; KEGG: bbt:BBta_7040 NLP/P60 family protein; NLP/P60 protein complement(1772507..1773364) Rhodopseudomonas palustris DX-1 10063864 YP_004108014.1 CDS Rpdx1_1664 NC_014834.1 1773357 1774739 R KEGG: nha:Nham_0384 leucyl aminopeptidase; manually curated; PFAM: peptidase M17 leucyl aminopeptidase domain protein; peptidase M17 leucyl aminopeptidase domain-containing protein complement(1773357..1774739) Rhodopseudomonas palustris DX-1 10063865 YP_004108015.1 CDS Rpdx1_1665 NC_014834.1 1774852 1775643 D KEGG: nha:Nham_0385 tetratricopeptide TPR_2; tetratricopeptide-repeat containing protein 1774852..1775643 Rhodopseudomonas palustris DX-1 10063866 YP_004108016.1 CDS Rpdx1_1666 NC_014834.1 1775672 1776646 R PFAM: Type II secretion system F domain; KEGG: nha:Nham_0386 type II secretion system protein; Type II secretion system F domain complement(1775672..1776646) Rhodopseudomonas palustris DX-1 10063867 YP_004108017.1 CDS Rpdx1_1667 NC_014834.1 1776656 1777630 R PFAM: Type II secretion system F domain; KEGG: bra:BRADO1015 putative pilus assembly protein; putative membrane protein; Type II secretion system F domain complement(1776656..1777630) Rhodopseudomonas palustris DX-1 10063868 YP_004108018.1 CDS Rpdx1_1668 NC_014834.1 1777643 1779103 R PFAM: type II secretion system protein E; KEGG: bja:bll1436 pilus assembly protein; type II secretion system protein E complement(1777643..1779103) Rhodopseudomonas palustris DX-1 10063869 YP_004108019.1 CDS Rpdx1_1669 NC_014834.1 1779125 1780396 R KEGG: bra:BRADO1017 putative pilus assembly protein CpaE; putative pilus assembly protein CpaE complement(1779125..1780396) Rhodopseudomonas palustris DX-1 10063870 YP_004108020.1 CDS Rpdx1_1670 NC_014834.1 1780393 1781121 R KEGG: nha:Nham_0390 pilus assembly protein CpaD; TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: Pilus biogenesis CpaD-related; pilus biogenesis lipoprotein CpaD complement(1780393..1781121) Rhodopseudomonas palustris DX-1 10063871 YP_004108021.1 CDS Rpdx1_1671 NC_014834.1 1781141 1782577 R PFAM: type II and III secretion system protein; transport-associated; KEGG: nha:Nham_0391 type II and III secretion system protein; type II and III secretion system protein complement(1781141..1782577) Rhodopseudomonas palustris DX-1 10063872 YP_004108022.1 CDS Rpdx1_1672 NC_014834.1 1782591 1783391 R KEGG: nha:Nham_0392 Flp pilus assembly CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; Flp pilus assembly protein CpaB complement(1782591..1783391) Rhodopseudomonas palustris DX-1 10063873 YP_004108023.1 CDS Rpdx1_1673 NC_014834.1 1783498 1784022 R PFAM: peptidase A24A prepilin type IV; KEGG: nha:Nham_0393 peptidase A24A, prepilin type IV; peptidase A24A prepilin type IV complement(1783498..1784022) Rhodopseudomonas palustris DX-1 10063874 YP_004108024.1 CDS Rpdx1_1674 NC_014834.1 1784368 1784535 R PFAM: Flp/Fap pilin component; KEGG: bbt:BBta_7028 putative Flp/Fap pilin component; Flp/Fap pilin component complement(1784368..1784535) Rhodopseudomonas palustris DX-1 10063875 YP_004108025.1 CDS Rpdx1_1675 NC_014834.1 1784935 1785423 D KEGG: nwi:Nwi_0305 hypothetical protein; hypothetical protein 1784935..1785423 Rhodopseudomonas palustris DX-1 10063876 YP_004108026.1 CDS Rpdx1_1676 NC_014834.1 1785588 1786109 D PFAM: TadE family protein; KEGG: bbt:BBta_7024 hypothetical protein; TadE family protein 1785588..1786109 Rhodopseudomonas palustris DX-1 10063877 YP_004108027.1 CDS Rpdx1_1677 NC_014834.1 1786122 1786739 D PFAM: TadE family protein; KEGG: bbt:BBta_7023 hypothetical protein; TadE family protein 1786122..1786739 Rhodopseudomonas palustris DX-1 10063878 YP_004108028.1 CDS Rpdx1_1678 NC_014834.1 1786880 1787134 R KEGG: bbt:BBta_7022 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(1786880..1787134) Rhodopseudomonas palustris DX-1 10063879 YP_004108029.1 CDS Rpdx1_1679 NC_014834.1 1787374 1787652 R KEGG: nwi:Nwi_0312 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; translation initiation factor IF-1 complement(1787374..1787652) Rhodopseudomonas palustris DX-1 10063880 YP_004108030.1 CDS Rpdx1_1680 NC_014834.1 1787677 1789098 R KEGG: nha:Nham_0400 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase complement(1787677..1789098) Rhodopseudomonas palustris DX-1 10063881 YP_004108031.1 CDS Rpdx1_1681 NC_014834.1 1789594 1790916 D TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bra:BRADO1031 branched chain amino-acid ABC transporter substrate-binding protein; urea ABC transporter urea-binding protein 1789594..1790916 Rhodopseudomonas palustris DX-1 10063882 YP_004108032.1 CDS Rpdx1_1682 NC_014834.1 1791025 1792638 D KEGG: bja:blr1449 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; urea ABC transporter permease UrtB 1791025..1792638 Rhodopseudomonas palustris DX-1 10063883 YP_004108033.1 CDS Rpdx1_1683 NC_014834.1 1792796 1793992 D KEGG: bja:blr1450 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; urea ABC transporter permease UrtC 1792796..1793992 Rhodopseudomonas palustris DX-1 10063884 YP_004108034.1 CDS Rpdx1_1684 NC_014834.1 1793989 1794753 D TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bbt:BBta_7015 putative branched-chain amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtD 1793989..1794753 Rhodopseudomonas palustris DX-1 10063885 YP_004108035.1 CDS Rpdx1_1685 NC_014834.1 1794865 1795560 D TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: bbt:BBta_7014 putative branched-chain amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE 1794865..1795560 Rhodopseudomonas palustris DX-1 10063886 YP_004108036.1 CDS Rpdx1_1686 NC_014834.1 1795596 1796432 D PFAM: Urease accessory protein UreD; KEGG: bja:blr1453 urease accessory protein; Urease accessory protein UreD 1795596..1796432 Rhodopseudomonas palustris DX-1 10063887 YP_004108037.1 CDS Rpdx1_1687 NC_014834.1 1796479 1796781 D TIGRFAM: urease, gamma subunit; KEGG: sme:SMc01941 urease subunit gamma; PFAM: Urease gamma subunit region; urease subunit gamma 1796479..1796781 Rhodopseudomonas palustris DX-1 10063888 YP_004108038.1 CDS Rpdx1_1688 NC_014834.1 1796941 1797246 D TIGRFAM: urease, beta subunit; KEGG: bbt:BBta_7011 urease subunit beta; PFAM: Urease beta subunit; urease subunit beta 1796941..1797246 Rhodopseudomonas palustris DX-1 10063889 YP_004108039.1 CDS Rpdx1_1689 NC_014834.1 1797248 1798960 D TIGRFAM: urease, alpha subunit; KEGG: bja:blr1457 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein; urease subunit alpha 1797248..1798960 Rhodopseudomonas palustris DX-1 10063890 YP_004108040.1 CDS Rpdx1_1690 NC_014834.1 1799174 1799473 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bja:bsr1458 hypothetical protein; antibiotic biosynthesis monooxygenase 1799174..1799473 Rhodopseudomonas palustris DX-1 10063891 YP_004108041.1 CDS Rpdx1_1691 NC_014834.1 1799482 1800138 D PFAM: UreE urease accessory domain protein; KEGG: bra:BRADO1043 urease accessory protein UreE; UreE urease accessory domain-containing protein 1799482..1800138 Rhodopseudomonas palustris DX-1 10063892 YP_004108042.1 CDS Rpdx1_1692 NC_014834.1 1800128 1800850 D PFAM: Urease accessory protein UreF; KEGG: bja:blr1459 urease accessory protein; Urease accessory protein UreF 1800128..1800850 Rhodopseudomonas palustris DX-1 10063893 YP_004108043.1 CDS Rpdx1_1693 NC_014834.1 1801003 1802565 R PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll1329 acyl-CoA synthetase; AMP-dependent synthetase and ligase complement(1801003..1802565) Rhodopseudomonas palustris DX-1 10063894 YP_004108044.1 CDS Rpdx1_1694 NC_014834.1 1802677 1803639 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: bja:blr1330 hypothetical protein; 2-nitropropane dioxygenase 1802677..1803639 Rhodopseudomonas palustris DX-1 10063895 YP_004108045.1 CDS Rpdx1_1695 NC_014834.1 1803719 1804771 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bja:blr2780 NAD-dependent alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 1803719..1804771 Rhodopseudomonas palustris DX-1 10063896 YP_004108046.1 CDS Rpdx1_1696 NC_014834.1 1804881 1805501 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: mes:Meso_2432 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A complement(1804881..1805501) Rhodopseudomonas palustris DX-1 10063897 YP_004108047.1 CDS Rpdx1_1697 NC_014834.1 1805629 1805886 D PFAM: SirA family protein; KEGG: bja:bsr2313 hypothetical protein; SirA family protein 1805629..1805886 Rhodopseudomonas palustris DX-1 10063898 YP_004108048.1 CDS Rpdx1_1698 NC_014834.1 1805950 1806369 D KEGG: oca:OCAR_4053 hypothetical protein; hypothetical protein 1805950..1806369 Rhodopseudomonas palustris DX-1 10063899 YP_004108049.1 CDS Rpdx1_1699 NC_014834.1 1806434 1807393 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: met:M446_5547 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein complement(1806434..1807393) Rhodopseudomonas palustris DX-1 10063900 YP_004108050.1 CDS Rpdx1_1700 NC_014834.1 1807734 1808618 R TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bja:blr6774 hypothetical protein; SMART: Ku domain protein; Ku protein complement(1807734..1808618) Rhodopseudomonas palustris DX-1 10063901 YP_004108051.1 CDS Rpdx1_1701 NC_014834.1 1808752 1811496 D KEGG: bja:bll6773 ATP-dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA primase small subunit; DNA ligase D 1808752..1811496 Rhodopseudomonas palustris DX-1 10063902 YP_004108052.1 CDS Rpdx1_1702 NC_014834.1 1811580 1811744 R KEGG: nha:Nham_2869 hypothetical protein; hypothetical protein complement(1811580..1811744) Rhodopseudomonas palustris DX-1 10063903 YP_004108053.1 CDS Rpdx1_1703 NC_014834.1 1811921 1812229 D KEGG: bbt:BBta_6327 hypothetical protein; hypothetical protein 1811921..1812229 Rhodopseudomonas palustris DX-1 10063904 YP_004108054.1 CDS Rpdx1_1704 NC_014834.1 1812627 1815413 R SMART: alpha amylase catalytic sub domain; TIGRFAM: malto-oligosyltrehalose synthase; KEGG: bra:BRADO5820 putative glycosyl hydrolase (glycosidase); PFAM: alpha amylase catalytic region; malto-oligosyltrehalose synthase complement(1812627..1815413) Rhodopseudomonas palustris DX-1 10063905 YP_004108055.1 CDS Rpdx1_1705 NC_014834.1 1815414 1817183 R TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: bbt:BBta_6325 putative maltooligosyltrehalose trehalohydrolase; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase complement(1815414..1817183) Rhodopseudomonas palustris DX-1 10063906 YP_004108056.1 CDS Rpdx1_1706 NC_014834.1 1817180 1819261 R TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: bja:blr6769 glycogen debranching enzyme; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX complement(1817180..1819261) Rhodopseudomonas palustris DX-1 10063907 YP_004108057.1 CDS Rpdx1_1707 NC_014834.1 1819524 1821674 R TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: bja:blr6768 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan branching protein complement(1819524..1821674) Rhodopseudomonas palustris DX-1 10063908 YP_004108058.1 CDS Rpdx1_1708 NC_014834.1 1821671 1824973 R TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; aminoglycoside phosphotransferase; KEGG: bja:blr6767 trehalose synthase; SMART: alpha amylase catalytic sub domain; trehalose synthase complement(1821671..1824973) Rhodopseudomonas palustris DX-1 10063909 YP_004108059.1 CDS Rpdx1_1709 NC_014834.1 1824984 1826975 R KEGG: nha:Nham_1466 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase complement(1824984..1826975) Rhodopseudomonas palustris DX-1 10063910 YP_004108060.1 CDS Rpdx1_1710 NC_014834.1 1827141 1829099 D TIGRFAM: 4-alpha-glucanotransferase; KEGG: bra:BRADO5815 putative 4-alpha-glucanotransferase (MalQ-like); PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase 1827141..1829099 Rhodopseudomonas palustris DX-1 10063911 YP_004108061.1 CDS Rpdx1_1711 NC_014834.1 1829096 1830913 D PFAM: glycoside hydrolase 15-related; KEGG: bja:bll6764 hypothetical protein; glycoside hydrolase 15-like protein 1829096..1830913 Rhodopseudomonas palustris DX-1 10063912 YP_004108062.1 CDS Rpdx1_1712 NC_014834.1 1830910 1831728 R KEGG: bja:blr6763 hypothetical protein; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase complement(1830910..1831728) Rhodopseudomonas palustris DX-1 10063913 YP_004108063.1 CDS Rpdx1_1713 NC_014834.1 1831855 1832397 R TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: bra:BRADO5812 putative bifunctional: 6-phosphogluconolactonase (N-terminal) (Pgl); D-gluconate kinase (C-terminal); PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase complement(1831855..1832397) Rhodopseudomonas palustris DX-1 10063914 YP_004108064.1 CDS Rpdx1_1714 NC_014834.1 1832387 1833127 R KEGG: bja:blr6761 putative 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; 6-phosphogluconolactonase complement(1832387..1833127) Rhodopseudomonas palustris DX-1 10063915 YP_004108065.1 CDS Rpdx1_1715 NC_014834.1 1833131 1834645 R TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: bbt:BBta_6317 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(1833131..1834645) Rhodopseudomonas palustris DX-1 10063916 YP_004108066.1 CDS Rpdx1_1716 NC_014834.1 1834642 1835682 R KEGG: bbt:BBta_6316 6-phosphogluconate dehydrogenase-like protein; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase complement(1834642..1835682) Rhodopseudomonas palustris DX-1 10063917 YP_004108067.1 CDS Rpdx1_1717 NC_014834.1 1835870 1838722 R KEGG: bja:blr6758 bifunctional transaldolase/phosoglucose isomerase; TIGRFAM: transaldolase; PFAM: Transaldolase; phosphoglucose isomerase (PGI); transaldolase complement(1835870..1838722) Rhodopseudomonas palustris DX-1 10063918 YP_004108068.1 CDS Rpdx1_1718 NC_014834.1 1838958 1839956 R KEGG: bbt:BBta_6305 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase complement(1838958..1839956) Rhodopseudomonas palustris DX-1 10063919 YP_004108069.1 CDS Rpdx1_1719 NC_014834.1 1840059 1840337 D KEGG: nha:Nham_3268 hypothetical protein; hypothetical protein 1840059..1840337 Rhodopseudomonas palustris DX-1 10063920 YP_004108070.1 CDS Rpdx1_1720 NC_014834.1 1840409 1841806 D PFAM: Amidase; KEGG: bja:bll6733 amidase; amidase 1840409..1841806 Rhodopseudomonas palustris DX-1 10063921 YP_004108071.1 CDS Rpdx1_1721 NC_014834.1 1841825 1842301 D KEGG: bra:BRADO5788 glutathione peroxidase; PFAM: glutathione peroxidase; peroxiredoxin 1841825..1842301 Rhodopseudomonas palustris DX-1 10063922 YP_004108072.1 CDS Rpdx1_1722 NC_014834.1 1842298 1842552 D PFAM: Protein of unknown function DUF3297; KEGG: bra:BRADO5787 hypothetical protein; hypothetical protein 1842298..1842552 Rhodopseudomonas palustris DX-1 10063923 YP_004108073.1 CDS Rpdx1_1723 NC_014834.1 1843393 1843734 R PFAM: Excinuclease ABC C subunit domain protein; KEGG: oca:OCAR_7056 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C domain-containing protein complement(1843393..1843734) Rhodopseudomonas palustris DX-1 10063924 YP_004108074.1 CDS Rpdx1_1724 NC_014834.1 1843849 1844235 D KEGG: nha:Nham_2920 hypothetical protein; hypothetical protein 1843849..1844235 Rhodopseudomonas palustris DX-1 10063925 YP_004108075.1 CDS Rpdx1_1725 NC_014834.1 1844386 1845315 D PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bra:BRADO5762 putative gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 1844386..1845315 Rhodopseudomonas palustris DX-1 10063926 YP_004108076.1 CDS Rpdx1_1726 NC_014834.1 1845467 1846063 D PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_2919 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1845467..1846063 Rhodopseudomonas palustris DX-1 10063927 YP_004108077.1 CDS Rpdx1_1727 NC_014834.1 1846203 1846487 D KEGG: nfi:NFIA_062490 cytochrome P450 monooxygenase (Fum15), putative; hypothetical protein 1846203..1846487 Rhodopseudomonas palustris DX-1 10063928 YP_004108078.1 CDS Rpdx1_1728 NC_014834.1 1846559 1847551 R PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bja:blr2392 putative dioxygenase subunit; ferredoxin complement(1846559..1847551) Rhodopseudomonas palustris DX-1 10063929 YP_004108079.1 CDS Rpdx1_1729 NC_014834.1 1847583 1848338 R KEGG: bja:blr2391 transcriptional regulatory protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(1847583..1848338) Rhodopseudomonas palustris DX-1 10063930 YP_004108080.1 CDS Rpdx1_1730 NC_014834.1 1848342 1849385 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:blr2390 vanillate O-demethylase oxygenase subunit; Rieske (2Fe-2S) iron-sulfur domain complement(1848342..1849385) Rhodopseudomonas palustris DX-1 10063931 YP_004108081.1 CDS Rpdx1_1731 NC_014834.1 1849579 1850733 D PFAM: Protein of unknown function DUF1963; KEGG: btk:BT9727_1822 hypothetical protein; hypothetical protein 1849579..1850733 Rhodopseudomonas palustris DX-1 10063932 YP_004108082.1 CDS Rpdx1_1732 NC_014834.1 1850837 1851679 R KEGG: bbt:BBta_6260 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase complement(1850837..1851679) Rhodopseudomonas palustris DX-1 10063933 YP_004108083.1 CDS Rpdx1_1733 NC_014834.1 1851797 1852051 R PFAM: Transglycosylase-associated protein; KEGG: nha:Nham_2918 transglycosylase-associated protein; transglycosylase-associated protein complement(1851797..1852051) Rhodopseudomonas palustris DX-1 10063934 YP_004108084.1 CDS Rpdx1_1734 NC_014834.1 1852239 1854176 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: bja:bll1362 hypothetical protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor -containing diguanylate cyclase complement(1852239..1854176) Rhodopseudomonas palustris DX-1 10063935 YP_004108085.1 CDS Rpdx1_1735 NC_014834.1 1854344 1855519 D KEGG: bra:BRADO5746 hypothetical protein; hypothetical protein 1854344..1855519 Rhodopseudomonas palustris DX-1 10063936 YP_004108086.1 CDS Rpdx1_1736 NC_014834.1 1855663 1856073 D KEGG: bbt:BBta_6257 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 1855663..1856073 Rhodopseudomonas palustris DX-1 10063937 YP_004108087.1 CDS Rpdx1_1737 NC_014834.1 1856266 1857123 D KEGG: nha:Nham_2916 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 1856266..1857123 Rhodopseudomonas palustris DX-1 10063938 YP_004108088.1 CDS Rpdx1_1738 NC_014834.1 1857133 1858113 R KEGG: nwi:Nwi_2489 hypothetical protein; hypothetical protein complement(1857133..1858113) Rhodopseudomonas palustris DX-1 10063939 YP_004108089.1 CDS Rpdx1_1739 NC_014834.1 1858537 1859700 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:bll6688 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1858537..1859700 Rhodopseudomonas palustris DX-1 10063940 YP_004108090.1 CDS Rpdx1_1740 NC_014834.1 1859787 1859990 R KEGG: bja:bsr6686 hypothetical protein; hypothetical protein complement(1859787..1859990) Rhodopseudomonas palustris DX-1 10063941 YP_004108091.1 CDS Rpdx1_1741 NC_014834.1 1860157 1862556 R KEGG: gsu:GSU0709 hypothetical protein; manually curated; PFAM: KAP P-loop domain protein; KAP P-loop domain-containing protein complement(1860157..1862556) Rhodopseudomonas palustris DX-1 10063942 YP_004108092.1 CDS Rpdx1_1742 NC_014834.1 1862656 1864305 D KEGG: bbt:BBta_6251 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1862656..1864305 Rhodopseudomonas palustris DX-1 10063943 YP_004108093.1 CDS Rpdx1_1743 NC_014834.1 1864316 1864714 R PFAM: PilT protein domain protein; KEGG: rhi:NGR_b23580 putative nucleic acid-binding protein; PilT domain-containing protein complement(1864316..1864714) Rhodopseudomonas palustris DX-1 10063944 YP_004108094.1 CDS Rpdx1_1744 NC_014834.1 1864711 1864965 R KEGG: sme:SMc02658 hypothetical protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator complement(1864711..1864965) Rhodopseudomonas palustris DX-1 10063945 YP_004108095.1 CDS Rpdx1_1745 NC_014834.1 1865129 1865899 D KEGG: nha:Nham_2909 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 11; trans-aconitate 2-methyltransferase 1865129..1865899 Rhodopseudomonas palustris DX-1 10063946 YP_004108096.1 CDS Rpdx1_1746 NC_014834.1 1866076 1866666 D PFAM: conserved hypothetical protein; KEGG: oca:OCAR_7046 hypothetical protein; hypothetical protein 1866076..1866666 Rhodopseudomonas palustris DX-1 10063947 YP_004108097.1 CDS Rpdx1_1747 NC_014834.1 1866663 1867910 D KEGG: bja:bll6684 transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; lytic murein transglycosylase 1866663..1867910 Rhodopseudomonas palustris DX-1 10063948 YP_004108098.1 CDS Rpdx1_1748 NC_014834.1 1867986 1868270 R KEGG: nha:Nham_2906 hypothetical protein; hypothetical protein complement(1867986..1868270) Rhodopseudomonas palustris DX-1 10063949 YP_004108099.1 CDS Rpdx1_1749 NC_014834.1 1868492 1868836 R KEGG: bja:blr6682 hypothetical protein; hypothetical protein complement(1868492..1868836) Rhodopseudomonas palustris DX-1 10063950 YP_004108100.1 CDS Rpdx1_1750 NC_014834.1 1869213 1869413 D PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bbt:BBta_6243 putative bacterioferritin-associated ferredoxin; BFD domain-containing /(2Fe-2S)-binding domain-containing protein 1869213..1869413 Rhodopseudomonas palustris DX-1 10063951 YP_004108101.1 CDS Rpdx1_1751 NC_014834.1 1869544 1870023 D KEGG: xau:Xaut_3765 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; bacterioferritin 1869544..1870023 Rhodopseudomonas palustris DX-1 10063952 YP_004108102.1 CDS Rpdx1_1752 NC_014834.1 1870064 1870606 R KEGG: geo:Geob_1855 hypothetical protein; hypothetical protein complement(1870064..1870606) Rhodopseudomonas palustris DX-1 10063953 YP_004108103.1 CDS Rpdx1_1753 NC_014834.1 1870746 1872449 R KEGG: bbt:BBta_2901 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(1870746..1872449) Rhodopseudomonas palustris DX-1 10063954 YP_004108104.1 CDS Rpdx1_1755 NC_014834.1 1873378 1874007 R PFAM: SOUL heme-binding protein; KEGG: mrd:Mrad2831_4266 SOUL heme-binding protein; SOUL heme-binding protein complement(1873378..1874007) Rhodopseudomonas palustris DX-1 10063956 YP_004108105.1 CDS Rpdx1_1756 NC_014834.1 1874164 1874415 R manually curated; KEGG: bbt:BBta_6234 putative collagen-like protein; putative collagen-like protein complement(1874164..1874415) Rhodopseudomonas palustris DX-1 10063957 YP_004108106.1 CDS Rpdx1_1757 NC_014834.1 1874887 1875966 R KEGG: rrs:RoseRS_3378 protein kinase; hypothetical protein complement(1874887..1875966) Rhodopseudomonas palustris DX-1 10063958 YP_004108107.1 CDS Rpdx1_1758 NC_014834.1 1876328 1876927 D KEGG: sro:Sros_5931 hypothetical protein; hypothetical protein 1876328..1876927 Rhodopseudomonas palustris DX-1 10063959 YP_004108108.1 CDS Rpdx1_1759 NC_014834.1 1877068 1878018 R KEGG: nwi:Nwi_2469 hypothetical protein; hypothetical protein complement(1877068..1878018) Rhodopseudomonas palustris DX-1 10063960 YP_004108109.1 CDS Rpdx1_1760 NC_014834.1 1878210 1878638 D KEGG: nha:Nham_2898 hypothetical protein; hypothetical protein 1878210..1878638 Rhodopseudomonas palustris DX-1 10063961 YP_004108110.1 CDS Rpdx1_1761 NC_014834.1 1878631 1879182 R KEGG: bvi:Bcep1808_5397 L-carnitine dehydratase/bile acid-inducible protein F; hypothetical protein complement(1878631..1879182) Rhodopseudomonas palustris DX-1 10063962 YP_004108111.1 CDS Rpdx1_1762 NC_014834.1 1879478 1880770 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bbt:BBta_7587 hypothetical protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 1879478..1880770 Rhodopseudomonas palustris DX-1 10063963 YP_004108112.1 CDS Rpdx1_1763 NC_014834.1 1880788 1880976 R hypothetical protein complement(1880788..1880976) Rhodopseudomonas palustris DX-1 10063964 YP_004108113.1 CDS Rpdx1_1764 NC_014834.1 1881157 1881441 R KEGG: bcy:Bcer98_0238 alanine racemase; hypothetical protein complement(1881157..1881441) Rhodopseudomonas palustris DX-1 10063965 YP_004108114.1 CDS Rpdx1_1765 NC_014834.1 1881603 1883081 R KEGG: saq:Sare_0277 amino acid permease-associated region; hypothetical protein complement(1881603..1883081) Rhodopseudomonas palustris DX-1 10063966 YP_004108115.1 CDS Rpdx1_1766 NC_014834.1 1883299 1884066 D KEGG: met:M446_2033 methyltransferase type 11; type 11 methyltransferase 1883299..1884066 Rhodopseudomonas palustris DX-1 10063967 YP_004108116.1 CDS Rpdx1_1767 NC_014834.1 1884288 1884800 D KEGG: dal:Dalk_1505 von Willebrand factor type A; hypothetical protein 1884288..1884800 Rhodopseudomonas palustris DX-1 10063968 YP_004108117.1 CDS Rpdx1_1768 NC_014834.1 1884864 1885394 D KEGG: psa:PST_1052 transposase and inactivated derivative; transposase-like protein 1884864..1885394 Rhodopseudomonas palustris DX-1 10063969 YP_004108118.1 CDS Rpdx1_1769 NC_014834.1 1885515 1885748 D KEGG: rlg:Rleg_2764 hypothetical protein; hypothetical protein 1885515..1885748 Rhodopseudomonas palustris DX-1 10063970 YP_004108119.1 CDS Rpdx1_1771 NC_014834.1 1886665 1887003 D PFAM: Protein of unknown function DUF1778; KEGG: bid:Bind_1482 hypothetical protein; hypothetical protein 1886665..1887003 Rhodopseudomonas palustris DX-1 10063972 YP_004108120.1 CDS Rpdx1_1772 NC_014834.1 1886991 1887524 D manually curated; KEGG: mpo:Mpop_1352 hypothetical protein; hypothetical protein 1886991..1887524 Rhodopseudomonas palustris DX-1 10063973 YP_004108121.1 CDS Rpdx1_1773 NC_014834.1 1887829 1888227 D PFAM: protein of unknown function DUF1486; KEGG: bph:Bphy_5476 hypothetical protein; hypothetical protein 1887829..1888227 Rhodopseudomonas palustris DX-1 10063974 YP_004108122.1 CDS Rpdx1_1774 NC_014834.1 1889458 1890234 R KEGG: pbe:PB000972.03.0 hypothetical protein; hypothetical protein complement(1889458..1890234) Rhodopseudomonas palustris DX-1 10063975 YP_004108123.1 CDS Rpdx1_1775 NC_014834.1 1890478 1890897 D manually curated; KEGG: bja:bll7219 hypothetical protein; hypothetical protein 1890478..1890897 Rhodopseudomonas palustris DX-1 10063976 YP_004108124.1 CDS Rpdx1_1777 NC_014834.1 1891635 1893635 R KEGG: bbt:BBta_6226 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC complement(1891635..1893635) Rhodopseudomonas palustris DX-1 10063978 YP_004108125.1 CDS Rpdx1_1778 NC_014834.1 1893786 1894394 R KEGG: nwi:Nwi_2467 thiamine monophosphate synthase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(1893786..1894394) Rhodopseudomonas palustris DX-1 10063979 YP_004108126.1 CDS Rpdx1_1779 NC_014834.1 1894381 1895163 R PFAM: thiazole biosynthesis family protein; KEGG: bbt:BBta_6224 thiazole synthase; thiazole biosynthesis family protein complement(1894381..1895163) Rhodopseudomonas palustris DX-1 10063980 YP_004108127.1 CDS Rpdx1_1781 NC_014834.1 1895513 1895710 R KEGG: bbt:BBta_6223 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS complement(1895513..1895710) Rhodopseudomonas palustris DX-1 10063982 YP_004108128.1 CDS Rpdx1_1782 NC_014834.1 1895701 1896822 R PFAM: FAD dependent oxidoreductase; KEGG: bja:blr6655 thiamine biosynthesis oxidoreductase; FAD dependent oxidoreductase complement(1895701..1896822) Rhodopseudomonas palustris DX-1 10063983 YP_004108129.1 CDS Rpdx1_1783 NC_014834.1 1897051 1898388 R KEGG: bbt:BBta_6217 putative two component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(1897051..1898388) Rhodopseudomonas palustris DX-1 10063984 YP_004108130.1 CDS Rpdx1_1784 NC_014834.1 1898385 1899107 R KEGG: bbt:BBta_6216 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator complement(1898385..1899107) Rhodopseudomonas palustris DX-1 10063985 YP_004108131.1 CDS Rpdx1_1785 NC_014834.1 1899272 1899826 D KEGG: bja:bll6650 hypothetical protein; hypothetical protein 1899272..1899826 Rhodopseudomonas palustris DX-1 10063986 YP_004108132.1 CDS Rpdx1_1786 NC_014834.1 1900122 1900673 D PFAM: PRC-barrel domain protein; KEGG: bbt:BBta_6218 hypothetical protein; PRC-barrel domain-containing protein 1900122..1900673 Rhodopseudomonas palustris DX-1 10063987 YP_004108133.1 CDS Rpdx1_1787 NC_014834.1 1900796 1902358 R KEGG: nha:Nham_2886 hypothetical protein; hypothetical protein complement(1900796..1902358) Rhodopseudomonas palustris DX-1 10063988 YP_004108134.1 CDS Rpdx1_1788 NC_014834.1 1902515 1902853 R KEGG: stp:Strop_3754 peptidase S8/S53 subtilisin kexin sedolisin; hypothetical protein complement(1902515..1902853) Rhodopseudomonas palustris DX-1 10063989 YP_004108135.1 CDS Rpdx1_1789 NC_014834.1 1903041 1903757 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr6636 ATP synthase subunit; ErfK/YbiS/YcfS/YnhG family protein complement(1903041..1903757) Rhodopseudomonas palustris DX-1 10063990 YP_004108136.1 CDS Rpdx1_1790 NC_014834.1 1904027 1905475 D KEGG: tmz:Tmz1t_1789 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; tryptophanase 1904027..1905475 Rhodopseudomonas palustris DX-1 10063991 YP_004108137.1 CDS Rpdx1_1791 NC_014834.1 1905704 1905904 D KEGG: bbt:BBta_2412 hypothetical protein; hypothetical protein 1905704..1905904 Rhodopseudomonas palustris DX-1 10063992 YP_004108138.1 CDS Rpdx1_1792 NC_014834.1 1905964 1906812 R PFAM: Methyltransferase type 11; KEGG: sus:Acid_4410 arsenite S-adenosylmethyltransferase; type 11 methyltransferase complement(1905964..1906812) Rhodopseudomonas palustris DX-1 10063993 YP_004108139.1 CDS Rpdx1_1793 NC_014834.1 1906802 1907158 R KEGG: sus:Acid_4411 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein Crp; regulatory protein ArsR complement(1906802..1907158) Rhodopseudomonas palustris DX-1 10063994 YP_004108140.1 CDS Rpdx1_1794 NC_014834.1 1907255 1907554 D KEGG: xau:Xaut_3418 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 1907255..1907554 Rhodopseudomonas palustris DX-1 10063995 YP_004108141.1 CDS Rpdx1_1795 NC_014834.1 1907551 1908600 D PFAM: permease; KEGG: xau:Xaut_3419 permease; permease 1907551..1908600 Rhodopseudomonas palustris DX-1 10063996 YP_004108142.1 CDS Rpdx1_1796 NC_014834.1 1908613 1908849 D KEGG: xau:Xaut_3943 thiol-disulfide isomerase and thioredoxin; thiol-disulfide isomerase and thioredoxin 1908613..1908849 Rhodopseudomonas palustris DX-1 10063997 YP_004108143.1 CDS Rpdx1_1797 NC_014834.1 1908904 1909260 D SMART: regulatory protein ArsR; KEGG: oca:OCAR_4233 transcriptional regulator, ArsR family; regulatory protein ArsR 1908904..1909260 Rhodopseudomonas palustris DX-1 10063998 YP_004108144.1 CDS Rpdx1_1798 NC_014834.1 1909253 1909780 D KEGG: oca:OCAR_7747 transcriptional regulator, ArsR family; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein-tyrosine phosphatase, low molecular weight 1909253..1909780 Rhodopseudomonas palustris DX-1 10063999 YP_004108145.1 CDS Rpdx1_1799 NC_014834.1 1909780 1910205 D KEGG: oca:OCAR_4231 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase 1909780..1910205 Rhodopseudomonas palustris DX-1 10064000 YP_004108146.1 CDS Rpdx1_1800 NC_014834.1 1910452 1911504 D KEGG: oca:OCAR_4230 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 1910452..1911504 Rhodopseudomonas palustris DX-1 10064001 YP_004108147.1 CDS Rpdx1_1801 NC_014834.1 1911516 1912337 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azl:AZL_b01550 3-oxoacyl-[acyl-carrier-protein] reductase; short-chain dehydrogenase/reductase SDR complement(1911516..1912337) Rhodopseudomonas palustris DX-1 10064002 YP_004108148.1 CDS Rpdx1_1802 NC_014834.1 1912334 1913053 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sus:Acid_2708 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1912334..1913053) Rhodopseudomonas palustris DX-1 10064003 YP_004108149.1 CDS Rpdx1_1803 NC_014834.1 1913050 1914948 R KEGG: dol:Dole_1742 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(1913050..1914948) Rhodopseudomonas palustris DX-1 10064004 YP_004108150.1 CDS Rpdx1_1804 NC_014834.1 1915250 1915888 R KEGG: bja:bll0962 phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(1915250..1915888) Rhodopseudomonas palustris DX-1 10064005 YP_004108151.1 CDS Rpdx1_1805 NC_014834.1 1916065 1919532 D KEGG: nha:Nham_3087 outer membrane autotransporter barrel; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; polymorphic outer membrane protein; PFAM: Autotransporter beta- domain protein; outer membrane autotransporter barrel domain-containing protein 1916065..1919532 Rhodopseudomonas palustris DX-1 10064006 YP_004108152.1 CDS Rpdx1_1806 NC_014834.1 1919570 1919809 R KEGG: mdo:100013455 similar to organic anion transporter 4; hypothetical protein complement(1919570..1919809) Rhodopseudomonas palustris DX-1 10064007 YP_004108153.1 CDS Rpdx1_1807 NC_014834.1 1920004 1921959 D KEGG: bra:BRADO0729 putative methyl-accepting chemotaxis protein (chemoreceptor); PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1920004..1921959 Rhodopseudomonas palustris DX-1 10064008 YP_004108154.1 CDS Rpdx1_1808 NC_014834.1 1922084 1923313 D PFAM: Extensin family protein; KEGG: bja:bll6625 hypothetical protein; extensin family protein 1922084..1923313 Rhodopseudomonas palustris DX-1 10064009 YP_004108155.1 CDS Rpdx1_1809 NC_014834.1 1923314 1923961 R PFAM: regulatory protein TetR; KEGG: bja:blr6623 transcriptional regulatory protein; regulatory protein TetR complement(1923314..1923961) Rhodopseudomonas palustris DX-1 10064010 YP_004108156.1 CDS Rpdx1_1810 NC_014834.1 1924141 1925406 D PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_6188 putative multidrug resistance protein A; secretion protein HlyD family protein 1924141..1925406 Rhodopseudomonas palustris DX-1 10064011 YP_004108157.1 CDS Rpdx1_1811 NC_014834.1 1925559 1927154 D KEGG: bbt:BBta_6187 putative multidrug resistance protein B; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 1925559..1927154 Rhodopseudomonas palustris DX-1 10064012 YP_004108158.1 CDS Rpdx1_1812 NC_014834.1 1927162 1928571 R KEGG: gme:Gmet_2012 polysaccharide biosynthesis protein; hypothetical protein complement(1927162..1928571) Rhodopseudomonas palustris DX-1 10064013 YP_004108159.1 CDS Rpdx1_1813 NC_014834.1 1929153 1930019 R KEGG: bja:blr6611 amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(1929153..1930019) Rhodopseudomonas palustris DX-1 10064015 YP_004108160.1 CDS Rpdx1_1814 NC_014834.1 1930513 1931511 D KEGG: bbt:BBta_6182 S-adenosyl-dependent methyl transferase; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW 1930513..1931511 Rhodopseudomonas palustris DX-1 10064016 YP_004108161.1 CDS Rpdx1_1815 NC_014834.1 1931508 1931891 D KEGG: nwi:Nwi_1044 hypothetical protein; hypothetical protein 1931508..1931891 Rhodopseudomonas palustris DX-1 10064017 YP_004108162.1 CDS Rpdx1_1816 NC_014834.1 1931888 1933642 D KEGG: nha:Nham_1273 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; peptidoglycan glycosyltransferase 1931888..1933642 Rhodopseudomonas palustris DX-1 10064018 YP_004108163.1 CDS Rpdx1_1817 NC_014834.1 1933756 1935213 D KEGG: nha:Nham_1274 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramyl tripeptide synthetase 1933756..1935213 Rhodopseudomonas palustris DX-1 10064019 YP_004108164.1 CDS Rpdx1_1818 NC_014834.1 1935210 1936649 D KEGG: nha:Nham_1275 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 1935210..1936649 Rhodopseudomonas palustris DX-1 10064020 YP_004108165.1 CDS Rpdx1_1819 NC_014834.1 1936660 1937745 D KEGG: nha:Nham_1276 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase 1936660..1937745 Rhodopseudomonas palustris DX-1 10064021 YP_004108166.1 CDS Rpdx1_1820 NC_014834.1 1937897 1939294 D KEGG: nha:Nham_1277 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1937897..1939294 Rhodopseudomonas palustris DX-1 10064022 YP_004108167.1 CDS Rpdx1_1821 NC_014834.1 1939540 1940682 D KEGG: bja:bll6603 cell division protein; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; cell division protein FtsW 1939540..1940682 Rhodopseudomonas palustris DX-1 10064023 YP_004108168.1 CDS Rpdx1_1822 NC_014834.1 1940687 1941787 D KEGG: nwi:Nwi_1051 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 1940687..1941787 Rhodopseudomonas palustris DX-1 10064024 YP_004108169.1 CDS Rpdx1_1823 NC_014834.1 1941923 1943329 D KEGG: nha:Nham_1280 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; UDP-N-acetylmuramate--L-alanine ligase 1941923..1943329 Rhodopseudomonas palustris DX-1 10064025 YP_004108170.1 CDS Rpdx1_1824 NC_014834.1 1943346 1943825 D KEGG: cyc:PCC7424_4025 hypothetical protein; hypothetical protein 1943346..1943825 Rhodopseudomonas palustris DX-1 10064026 YP_004108171.1 CDS Rpdx1_1825 NC_014834.1 1943813 1944751 D TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: nwi:Nwi_1054 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 1943813..1944751 Rhodopseudomonas palustris DX-1 10064027 YP_004108172.1 CDS Rpdx1_1826 NC_014834.1 1944892 1945713 R KEGG: oca:OCAR_5246 hypothetical protein; hypothetical protein complement(1944892..1945713) Rhodopseudomonas palustris DX-1 10064028 YP_004108173.1 CDS Rpdx1_1827 NC_014834.1 1945947 1947275 D KEGG: mxa:MXAN_0277 hypothetical protein; hypothetical protein 1945947..1947275 Rhodopseudomonas palustris DX-1 10064029 YP_004108174.1 CDS Rpdx1_1828 NC_014834.1 1947382 1948371 D KEGG: nwi:Nwi_1055 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 1947382..1948371 Rhodopseudomonas palustris DX-1 10064030 YP_004108175.1 CDS Rpdx1_1830 NC_014834.1 1948689 1949678 D PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: bja:bll6598 putative cell division protein; cell division protein FtsQ 1948689..1949678 Rhodopseudomonas palustris DX-1 10064032 YP_004108176.1 CDS Rpdx1_1831 NC_014834.1 1949675 1950997 D KEGG: bra:BRADO5654 cell division protein ATPase; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; cell division protein FtsA 1949675..1950997 Rhodopseudomonas palustris DX-1 10064033 YP_004108177.1 CDS Rpdx1_1832 NC_014834.1 1951091 1952869 D KEGG: nha:Nham_1286 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 1951091..1952869 Rhodopseudomonas palustris DX-1 10064034 YP_004108178.1 CDS Rpdx1_1833 NC_014834.1 1953216 1954178 D KEGG: bja:bll6595 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-0-acyl N-acetylglucosamine deacetylase 1953216..1954178 Rhodopseudomonas palustris DX-1 10064035 YP_004108179.1 CDS Rpdx1_1834 NC_014834.1 1954408 1955316 D KEGG: bbt:BBta_6164 hypothetical protein; manually curated; TIGRFAM: outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein YfiO 1954408..1955316 Rhodopseudomonas palustris DX-1 10064036 YP_004108180.1 CDS Rpdx1_1835 NC_014834.1 1955329 1957014 D KEGG: nha:Nham_1289 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 1955329..1957014 Rhodopseudomonas palustris DX-1 10064037 YP_004108181.1 CDS Rpdx1_1836 NC_014834.1 1957187 1957474 R KEGG: bja:bsr6592 hypothetical protein; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; excinuclease ABC subunit C domain-containing protein complement(1957187..1957474) Rhodopseudomonas palustris DX-1 10064038 YP_004108182.1 CDS Rpdx1_1837 NC_014834.1 1957620 1959767 D SMART: NAD-dependent DNA ligase ; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: nha:Nham_1290 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; BRCT domain protein; NAD-dependent DNA ligase 1957620..1959767 Rhodopseudomonas palustris DX-1 10064039 YP_004108183.1 CDS Rpdx1_1838 NC_014834.1 1959897 1961186 R KEGG: bja:blr6590 major facilitator superfamily transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter complement(1959897..1961186) Rhodopseudomonas palustris DX-1 10064040 YP_004108184.1 CDS Rpdx1_1839 NC_014834.1 1961564 1963393 R PFAM: peptidase M24; creatinase; KEGG: bbt:BBta_6160 putative aminopeptidase P; peptidase M24 complement(1961564..1963393) Rhodopseudomonas palustris DX-1 10064041 YP_004108185.1 CDS Rpdx1_1840 NC_014834.1 1963590 1963784 D KEGG: bra:BRADO5645 hypothetical protein; hypothetical protein 1963590..1963784 Rhodopseudomonas palustris DX-1 10064042 YP_004108186.1 CDS Rpdx1_1841 NC_014834.1 1963809 1964792 R PFAM: ribosomal L11 methyltransferase; KEGG: nha:Nham_2746 ribosomal L11 methyltransferase; ribosomal L11 methyltransferase complement(1963809..1964792) Rhodopseudomonas palustris DX-1 10064043 YP_004108187.1 CDS Rpdx1_1842 NC_014834.1 1965161 1965463 D KEGG: sgr:SGR_3600 hypothetical protein; hypothetical protein 1965161..1965463 Rhodopseudomonas palustris DX-1 10064044 YP_004108188.1 CDS Rpdx1_1843 NC_014834.1 1965532 1967142 R PFAM: FAD dependent oxidoreductase; KEGG: bja:blr6586 phytoene dehydrogenase; FAD dependent oxidoreductase complement(1965532..1967142) Rhodopseudomonas palustris DX-1 10064045 YP_004108189.1 CDS Rpdx1_1844 NC_014834.1 1967216 1969582 D KEGG: bra:BRADO5641 hypothetical protein; hypothetical protein 1967216..1969582 Rhodopseudomonas palustris DX-1 10064046 YP_004108190.1 CDS Rpdx1_1845 NC_014834.1 1969620 1970381 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_2743 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein complement(1969620..1970381) Rhodopseudomonas palustris DX-1 10064047 YP_004108191.1 CDS Rpdx1_1846 NC_014834.1 1970651 1970998 D KEGG: bja:bll6580 hypothetical protein; hypothetical protein 1970651..1970998 Rhodopseudomonas palustris DX-1 10064048 YP_004108192.1 CDS Rpdx1_1847 NC_014834.1 1971099 1971860 R PFAM: ABC-2 type transporter; KEGG: nha:Nham_2741 hypothetical protein; ABC-2 type transporter complement(1971099..1971860) Rhodopseudomonas palustris DX-1 10064049 YP_004108193.1 CDS Rpdx1_1848 NC_014834.1 1971863 1972783 R KEGG: bbt:BBta_6149 putative ABC transporter (ATP binding protein); PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(1971863..1972783) Rhodopseudomonas palustris DX-1 10064050 YP_004108194.1 CDS Rpdx1_1849 NC_014834.1 1973046 1973330 R PFAM: protein of unknown function UPF0150; KEGG: nha:Nham_0567 hypothetical protein; hypothetical protein complement(1973046..1973330) Rhodopseudomonas palustris DX-1 10064051 YP_004108195.1 CDS Rpdx1_1850 NC_014834.1 1973330 1975921 R PFAM: UvrD/REP helicase; KEGG: nha:Nham_2739 UvrD/REP helicase; UvrD/REP helicase complement(1973330..1975921) Rhodopseudomonas palustris DX-1 10064052 YP_004108196.1 CDS Rpdx1_1851 NC_014834.1 1976234 1976407 D PFAM: protein of unknown function DUF1328; KEGG: bbt:BBta_6140 hypothetical protein; hypothetical protein 1976234..1976407 Rhodopseudomonas palustris DX-1 10064053 YP_004108197.1 CDS Rpdx1_1852 NC_014834.1 1976404 1976937 R KEGG: bra:BRADO5610 hypothetical protein; hypothetical protein complement(1976404..1976937) Rhodopseudomonas palustris DX-1 10064054 YP_004108198.1 CDS Rpdx1_1853 NC_014834.1 1977004 1978431 D PFAM: FAD linked oxidase domain protein; KEGG: bja:bll6558 oxidoreductase; FAD linked oxidase domain-containing protein 1977004..1978431 Rhodopseudomonas palustris DX-1 10064055 YP_004108199.1 CDS Rpdx1_1854 NC_014834.1 1978566 1982399 D PFAM: AsmA family protein; KEGG: bja:bll6536 hypothetical protein; AsmA family protein 1978566..1982399 Rhodopseudomonas palustris DX-1 10064056 YP_004108200.1 CDS Rpdx1_1855 NC_014834.1 1982421 1982699 R KEGG: nha:Nham_2734 hypothetical protein; hypothetical protein complement(1982421..1982699) Rhodopseudomonas palustris DX-1 10064057 YP_004108201.1 CDS Rpdx1_1856 NC_014834.1 1982696 1982884 R manually curated; KEGG: bbt:BBta_6107 hypothetical protein; hypothetical protein complement(1982696..1982884) Rhodopseudomonas palustris DX-1 10064058 YP_004108202.1 CDS Rpdx1_1857 NC_014834.1 1983148 1984575 R KEGG: nha:Nham_2732 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like; class II fumarate hydratase complement(1983148..1984575) Rhodopseudomonas palustris DX-1 10064059 YP_004108203.1 CDS Rpdx1_1858 NC_014834.1 1984686 1985222 R KEGG: bbt:BBta_6105 hypothetical protein; hypothetical protein complement(1984686..1985222) Rhodopseudomonas palustris DX-1 10064060 YP_004108204.1 CDS Rpdx1_1859 NC_014834.1 1985936 1986535 D PFAM: Chromate transporter; KEGG: bra:BRADO5582 putative chromate transport protein (ChrA-like); chromate transporter 1985936..1986535 Rhodopseudomonas palustris DX-1 10064062 YP_004108205.1 CDS Rpdx1_1860 NC_014834.1 1986532 1987062 D PFAM: Chromate transporter; KEGG: bja:bll6516 putative transmembrane protein; chromate transporter 1986532..1987062 Rhodopseudomonas palustris DX-1 10064063 YP_004108206.1 CDS Rpdx1_1861 NC_014834.1 1987135 1987635 D KEGG: bra:BRADO5580 hypothetical protein; hypothetical protein 1987135..1987635 Rhodopseudomonas palustris DX-1 10064064 YP_004108207.1 CDS Rpdx1_1862 NC_014834.1 1987646 1989160 D PFAM: protein of unknown function DUF112 transmembrane; KEGG: bja:bll6514 hypothetical protein; hypothetical protein 1987646..1989160 Rhodopseudomonas palustris DX-1 10064065 YP_004108208.1 CDS Rpdx1_1863 NC_014834.1 1989266 1990273 D PFAM: conserved hypothetical protein; KEGG: bja:bll6513 hypothetical protein; hypothetical protein 1989266..1990273 Rhodopseudomonas palustris DX-1 10064066 YP_004108209.1 CDS Rpdx1_1864 NC_014834.1 1990511 1991413 D TIGRFAM: thymidylate synthase; KEGG: rsh:Rsph17029_2044 thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase 1990511..1991413 Rhodopseudomonas palustris DX-1 10064067 YP_004108210.1 CDS Rpdx1_1865 NC_014834.1 1997941 1998060 D hypothetical protein 1997941..1998060 Rhodopseudomonas palustris DX-1 10064073 YP_004108211.1 CDS Rpdx1_1866 NC_014834.1 1998060 1998587 D KEGG: bja:bll6510 dihydrofolate reductase; PFAM: dihydrofolate reductase region; dihydrofolate reductase 1998060..1998587 Rhodopseudomonas palustris DX-1 10064074 YP_004108212.1 CDS Rpdx1_1867 NC_014834.1 1998732 1999880 D TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: oca:OCAR_5278 HflK protein; SMART: band 7 protein; HflK protein 1998732..1999880 Rhodopseudomonas palustris DX-1 10064075 YP_004108213.1 CDS Rpdx1_1868 NC_014834.1 1999877 2000821 D TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: oca:OCAR_5279 HflC protein; SMART: band 7 protein; HflC protein 1999877..2000821 Rhodopseudomonas palustris DX-1 10064076 YP_004108214.1 CDS Rpdx1_1869 NC_014834.1 2001087 2001287 D PFAM: Protein of unknown function DUF2065; KEGG: bja:bsl6507 hypothetical protein; hypothetical protein 2001087..2001287 Rhodopseudomonas palustris DX-1 10064077 YP_004108215.1 CDS Rpdx1_1870 NC_014834.1 2001696 2003198 D SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bbt:BBta_6094 putative serine protease do-like precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 2001696..2003198 Rhodopseudomonas palustris DX-1 10064078 YP_004108216.1 CDS Rpdx1_1871 NC_014834.1 2003204 2003845 D PFAM: protein of unknown function DUF548; KEGG: atc:AGR_L_1626 hypothetical protein; hypothetical protein 2003204..2003845 Rhodopseudomonas palustris DX-1 10064079 YP_004108217.1 CDS Rpdx1_1872 NC_014834.1 2004178 2005218 D PFAM: Extracellular solute-binding protein, family 7; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: hch:HCH_00744 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; family 7 extracellular solute-binding protein 2004178..2005218 Rhodopseudomonas palustris DX-1 10064080 YP_004108218.1 CDS Rpdx1_1873 NC_014834.1 2005335 2005877 D PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aco:Amico_0458 tripartite ATP-independent periplasmic transporter DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ 2005335..2005877 Rhodopseudomonas palustris DX-1 10064081 YP_004108219.1 CDS Rpdx1_1874 NC_014834.1 2005892 2007214 D KEGG: aco:Amico_0459 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 2005892..2007214 Rhodopseudomonas palustris DX-1 10064082 YP_004108220.1 CDS Rpdx1_1875 NC_014834.1 2007310 2008536 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_3863 formyl-CoA transferase; L-carnitine dehydratase/bile acid-inducible protein F 2007310..2008536 Rhodopseudomonas palustris DX-1 10064083 YP_004108221.1 CDS Rpdx1_1876 NC_014834.1 2008547 2008879 R PFAM: DNA polymerase beta domain protein region; KEGG: lch:Lcho_3353 DNA polymerase beta subunit; DNA polymerase beta domain-containing protein complement(2008547..2008879) Rhodopseudomonas palustris DX-1 10064084 YP_004108222.1 CDS Rpdx1_1877 NC_014834.1 2008876 2009289 R KEGG: aat:D11S_0470 HI0074 family nucleotidyltransferase substrate binding protein; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; nucleotidyltransferase substrate-binding protein complement(2008876..2009289) Rhodopseudomonas palustris DX-1 10064085 YP_004108223.1 CDS Rpdx1_1878 NC_014834.1 2009495 2009662 D hypothetical protein 2009495..2009662 Rhodopseudomonas palustris DX-1 10064086 YP_004108224.1 CDS Rpdx1_1879 NC_014834.1 2009600 2010553 R PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein; Integrase catalytic subunit complement(2009600..2010553) Rhodopseudomonas palustris DX-1 10064087 YP_004108225.1 CDS Rpdx1_1880 NC_014834.1 2010652 2011848 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mdi:METDI0840 putative phage integrase; integrase family protein 2010652..2011848 Rhodopseudomonas palustris DX-1 10064088 YP_004108226.1 CDS Rpdx1_1881 NC_014834.1 2011851 2012342 R KEGG: apb:SAR116_0394 possible DNA-dependent RNA polymerase; hypothetical protein complement(2011851..2012342) Rhodopseudomonas palustris DX-1 10064089 YP_004108227.1 CDS Rpdx1_1882 NC_014834.1 2012463 2013056 R KEGG: bvi:Bcep1808_5579 amidase; hypothetical protein complement(2012463..2013056) Rhodopseudomonas palustris DX-1 10064090 YP_004108228.1 CDS Rpdx1_1883 NC_014834.1 2013218 2013922 D PFAM: Resolvase domain; KEGG: met:M446_1223 resolvase domain-containing protein; resolvase domain-containing protein 2013218..2013922 Rhodopseudomonas palustris DX-1 10064091 YP_004108229.1 CDS Rpdx1_1884 NC_014834.1 2014936 2015034 D hypothetical protein 2014936..2015034 Rhodopseudomonas palustris DX-1 10064092 YP_004108230.1 CDS Rpdx1_1885 NC_014834.1 2015436 2015774 D KEGG: bja:bll3892 hypothetical protein; hypothetical protein 2015436..2015774 Rhodopseudomonas palustris DX-1 10064093 YP_004108231.1 CDS Rpdx1_1886 NC_014834.1 2015771 2015989 D hypothetical protein 2015771..2015989 Rhodopseudomonas palustris DX-1 10064094 YP_004108232.1 CDS Rpdx1_1887 NC_014834.1 2016136 2017167 D KEGG: ote:Oter_1689 cell wall surface anchor family protein; hypothetical protein 2016136..2017167 Rhodopseudomonas palustris DX-1 10064095 YP_004108233.1 CDS Rpdx1_1888 NC_014834.1 2017658 2018887 R KEGG: hypothetical protein; hypothetical protein complement(2017658..2018887) Rhodopseudomonas palustris DX-1 10064096 YP_004108234.1 CDS Rpdx1_1889 NC_014834.1 2020125 2020355 D PFAM: SpoVT/AbrB domain protein; KEGG: alv:Alvin_0249 transcriptional regulator/antitoxin, MazE; SpoVT/AbrB domain-containing protein 2020125..2020355 Rhodopseudomonas palustris DX-1 10064098 YP_004108235.1 CDS Rpdx1_1890 NC_014834.1 2020352 2020756 D PFAM: PilT protein domain protein; KEGG: nmu:Nmul_A0984 PilT protein-like; PilT domain-containing protein 2020352..2020756 Rhodopseudomonas palustris DX-1 10064099 YP_004108236.1 CDS Rpdx1_1891 NC_014834.1 2020802 2023936 R PFAM: acriflavin resistance protein; KEGG: nha:Nham_1509 acriflavin resistance protein; acriflavin resistance protein complement(2020802..2023936) Rhodopseudomonas palustris DX-1 10064100 YP_004108237.1 CDS Rpdx1_1892 NC_014834.1 2023939 2025156 R KEGG: nha:Nham_1510 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(2023939..2025156) Rhodopseudomonas palustris DX-1 10064101 YP_004108238.1 CDS Rpdx1_1893 NC_014834.1 2025479 2025724 D KEGG: bbt:BBta_3539 hypothetical protein; hypothetical protein 2025479..2025724 Rhodopseudomonas palustris DX-1 10064102 YP_004108239.1 CDS Rpdx1_1894 NC_014834.1 2026030 2028369 D KEGG: nha:Nham_1513 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor 2026030..2028369 Rhodopseudomonas palustris DX-1 10064103 YP_004108240.1 CDS Rpdx1_1895 NC_014834.1 2028395 2029084 D KEGG: bja:blr3905 putative hydroxylase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; 2OG-Fe(II) oxygenase 2028395..2029084 Rhodopseudomonas palustris DX-1 10064104 YP_004108241.1 CDS Rpdx1_1896 NC_014834.1 2029081 2030007 D KEGG: bja:blr3906 biopolymer transport protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB 2029081..2030007 Rhodopseudomonas palustris DX-1 10064105 YP_004108242.1 CDS Rpdx1_1897 NC_014834.1 2030011 2030460 D KEGG: nha:Nham_1516 biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TonB system transport protein ExbD 2030011..2030460 Rhodopseudomonas palustris DX-1 10064106 YP_004108243.1 CDS Rpdx1_1898 NC_014834.1 2030574 2031368 D TIGRFAM: TonB family protein; KEGG: nwi:Nwi_2307 TonB like protein; TonB family protein 2030574..2031368 Rhodopseudomonas palustris DX-1 10064107 YP_004108244.1 CDS Rpdx1_1899 NC_014834.1 2031392 2031637 R KEGG: abo:ABO_2675 hypothetical protein; hypothetical protein complement(2031392..2031637) Rhodopseudomonas palustris DX-1 10064108 YP_004108245.1 CDS Rpdx1_1900 NC_014834.1 2031984 2032733 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_3549 3-oxoacyl-acyl carrier protein reductase; short-chain dehydrogenase/reductase SDR complement(2031984..2032733) Rhodopseudomonas palustris DX-1 10064109 YP_004108246.1 CDS Rpdx1_1901 NC_014834.1 2032897 2033631 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO3102 putative 3-oxoacyl-[acyl-carrier-protein] reductase; short-chain dehydrogenase/reductase SDR complement(2032897..2033631) Rhodopseudomonas palustris DX-1 10064110 YP_004108247.1 CDS Rpdx1_1902 NC_014834.1 2033801 2035669 R KEGG: bbt:BBta_3551 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(2033801..2035669) Rhodopseudomonas palustris DX-1 10064111 YP_004108248.1 CDS Rpdx1_1903 NC_014834.1 2035846 2036910 D KEGG: bra:BRADO3105 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein 2035846..2036910 Rhodopseudomonas palustris DX-1 10064112 YP_004108249.1 CDS Rpdx1_1904 NC_014834.1 2037001 2038326 D PFAM: extracellular solute-binding protein family 1; KEGG: bra:BRADO3106 putative ABC transporter periplasmic-binding protein; family 1 extracellular solute-binding protein 2037001..2038326 Rhodopseudomonas palustris DX-1 10064113 YP_004108250.1 CDS Rpdx1_1905 NC_014834.1 2038672 2039625 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_3555 putative ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 2038672..2039625 Rhodopseudomonas palustris DX-1 10064114 YP_004108251.1 CDS Rpdx1_1906 NC_014834.1 2039618 2040544 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_3556 putative ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 2039618..2040544 Rhodopseudomonas palustris DX-1 10064115 YP_004108252.1 CDS Rpdx1_1907 NC_014834.1 2040768 2041754 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: bra:BRADO3109 putative UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 2040768..2041754 Rhodopseudomonas palustris DX-1 10064116 YP_004108253.1 CDS Rpdx1_1908 NC_014834.1 2041947 2043116 D PFAM: Thiolase-like; KEGG: bra:BRADO3110 acetyl-CoA acetyltransferase; Thiolase-like protein 2041947..2043116 Rhodopseudomonas palustris DX-1 10064117 YP_004108254.1 CDS Rpdx1_1909 NC_014834.1 2043138 2044649 D PFAM: AMP-dependent synthetase and ligase; KEGG: dsh:Dshi_0700 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2043138..2044649 Rhodopseudomonas palustris DX-1 10064118 YP_004108255.1 CDS Rpdx1_1910 NC_014834.1 2044655 2045536 R KEGG: svi:Svir_38940 acyl dehydratase; acyl dehydratase complement(2044655..2045536) Rhodopseudomonas palustris DX-1 10064119 YP_004108256.1 CDS Rpdx1_1911 NC_014834.1 2045745 2046947 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbt:BBta_3565 putative formyl-CoA transferase; L-carnitine dehydratase/bile acid-inducible protein F 2045745..2046947 Rhodopseudomonas palustris DX-1 10064120 YP_004108257.1 CDS Rpdx1_1913 NC_014834.1 2047311 2048447 D KEGG: bbt:BBta_3567 putative thiolase; propanoyl-CoA C-acyltransferase 2047311..2048447 Rhodopseudomonas palustris DX-1 10064122 YP_004108258.1 CDS Rpdx1_1914 NC_014834.1 2048444 2048809 D PFAM: protein of unknown function DUF35; KEGG: bja:blr3928 hypothetical protein; hypothetical protein 2048444..2048809 Rhodopseudomonas palustris DX-1 10064123 YP_004108259.1 CDS Rpdx1_1915 NC_014834.1 2048861 2049415 R KEGG: nmu:Nmul_A1418 hypothetical protein; hypothetical protein complement(2048861..2049415) Rhodopseudomonas palustris DX-1 10064124 YP_004108260.1 CDS Rpdx1_1916 NC_014834.1 2049521 2051587 R KEGG: bja:bll3936 hypothetical protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter complement(2049521..2051587) Rhodopseudomonas palustris DX-1 10064125 YP_004108261.1 CDS Rpdx1_1917 NC_014834.1 2051615 2052775 R TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:bll3937 hypothetical protein; TAXI family TRAP transporter solute receptor complement(2051615..2052775) Rhodopseudomonas palustris DX-1 10064126 YP_004108262.1 CDS Rpdx1_1918 NC_014834.1 2052962 2053183 R PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bja:bsl3938 putative biotinylated protein; biotin/lipoyl attachment domain-containing protein complement(2052962..2053183) Rhodopseudomonas palustris DX-1 10064127 YP_004108263.1 CDS Rpdx1_1919 NC_014834.1 2053449 2054414 D KEGG: bbt:BBta_3572 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 2053449..2054414 Rhodopseudomonas palustris DX-1 10064128 YP_004108264.1 CDS Rpdx1_1920 NC_014834.1 2054323 2055882 D KEGG: bja:blr3940 putative propionyl-CoA carboxylase beta chain; manually curated; PFAM: carboxyl transferase; carboxyl transferase 2054323..2055882 Rhodopseudomonas palustris DX-1 10064129 YP_004108265.1 CDS Rpdx1_1921 NC_014834.1 2055935 2057221 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll3948 monocarboxylate MFS permease; major facilitator superfamily protein complement(2055935..2057221) Rhodopseudomonas palustris DX-1 10064130 YP_004108266.1 CDS Rpdx1_1922 NC_014834.1 2057337 2058107 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_3576 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(2057337..2058107) Rhodopseudomonas palustris DX-1 10064131 YP_004108267.1 CDS Rpdx1_1923 NC_014834.1 2058252 2058827 D PFAM: thioesterase superfamily protein; KEGG: bja:blr3951 hypothetical protein; thioesterase superfamily protein 2058252..2058827 Rhodopseudomonas palustris DX-1 10064132 YP_004108268.1 CDS Rpdx1_1924 NC_014834.1 2058901 2059569 D PFAM: regulatory protein TetR; KEGG: bbt:BBta_3577 TetR family transcriptional regulator; regulatory protein TetR 2058901..2059569 Rhodopseudomonas palustris DX-1 10064133 YP_004108269.1 CDS Rpdx1_1925 NC_014834.1 2059729 2061225 D KEGG: bra:BRADO3137 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; methylmalonate-semialdehyde dehydrogenase 2059729..2061225 Rhodopseudomonas palustris DX-1 10064134 YP_004108270.1 CDS Rpdx1_1926 NC_014834.1 2061267 2061512 D KEGG: xau:Xaut_2192 hypothetical protein; hypothetical protein 2061267..2061512 Rhodopseudomonas palustris DX-1 10064135 YP_004108271.1 CDS Rpdx1_1927 NC_014834.1 2061509 2061937 D manually curated; KEGG: xau:Xaut_2191 PilT domain-containing protein; PilT domain-containing protein 2061509..2061937 Rhodopseudomonas palustris DX-1 10064136 YP_004108272.1 CDS Rpdx1_1928 NC_014834.1 2061934 2063082 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nha:Nham_2558 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 2061934..2063082 Rhodopseudomonas palustris DX-1 10064137 YP_004108273.1 CDS Rpdx1_1929 NC_014834.1 2063079 2064152 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO3139 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2063079..2064152 Rhodopseudomonas palustris DX-1 10064138 YP_004108274.1 CDS Rpdx1_1930 NC_014834.1 2064186 2065073 D KEGG: bbt:BBta_3581 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase 2064186..2065073 Rhodopseudomonas palustris DX-1 10064139 YP_004108275.1 CDS Rpdx1_1931 NC_014834.1 2065234 2066955 D PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr3958 putative acetyl-coenzyme A synthetase; AMP-dependent synthetase and ligase 2065234..2066955 Rhodopseudomonas palustris DX-1 10064140 YP_004108276.1 CDS Rpdx1_1932 NC_014834.1 2067141 2068031 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr5604 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(2067141..2068031) Rhodopseudomonas palustris DX-1 10064141 YP_004108277.1 CDS Rpdx1_1933 NC_014834.1 2068163 2069578 R PFAM: Amidase; KEGG: bja:blr5603 amidase; amidase complement(2068163..2069578) Rhodopseudomonas palustris DX-1 10064142 YP_004108278.1 CDS Rpdx1_1934 NC_014834.1 2069571 2070758 R TIGRFAM: amidohydrolase; KEGG: bbt:BBta_5260 putative amidohydrolase family protein; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(2069571..2070758) Rhodopseudomonas palustris DX-1 10064143 YP_004108279.1 CDS Rpdx1_1935 NC_014834.1 2071255 2072358 R PFAM: filamentation induced by cAMP protein Fic; KEGG: ara:Arad_7796 hypothetical protein; filamentation induced by cAMP protein fic complement(2071255..2072358) Rhodopseudomonas palustris DX-1 10064145 YP_004108280.1 CDS Rpdx1_1936 NC_014834.1 2072489 2073652 R PFAM: filamentation induced by cAMP protein Fic; KEGG: bbt:BBta_p0025 putative cAMP-induced filamentation protein; filamentation induced by cAMP protein fic complement(2072489..2073652) Rhodopseudomonas palustris DX-1 10064146 YP_004108281.1 CDS Rpdx1_1937 NC_014834.1 2073943 2074605 D manually curated; KEGG: smd:Smed_5453 hypothetical protein; hypothetical protein 2073943..2074605 Rhodopseudomonas palustris DX-1 10064147 YP_004108282.1 CDS Rpdx1_1938 NC_014834.1 2074598 2075464 D PFAM: Domain of unknown function DUF1814; KEGG: smd:Smed_5454 hypothetical protein; hypothetical protein 2074598..2075464 Rhodopseudomonas palustris DX-1 10064148 YP_004108283.1 CDS Rpdx1_1939 NC_014834.1 2075609 2076340 R KEGG: cce:Ccel_0516 hypothetical protein; hypothetical protein complement(2075609..2076340) Rhodopseudomonas palustris DX-1 10064149 YP_004108284.1 CDS Rpdx1_1940 NC_014834.1 2076479 2077339 R PFAM: protein of unknown function DUF23; KEGG: nha:Nham_1056 hypothetical protein; hypothetical protein complement(2076479..2077339) Rhodopseudomonas palustris DX-1 10064150 YP_004108285.1 CDS Rpdx1_1941 NC_014834.1 2077430 2077858 R PFAM: UspA domain protein; KEGG: app:CAP2UW1_0552 UspA domain protein; UspA domain-containing protein complement(2077430..2077858) Rhodopseudomonas palustris DX-1 10064151 YP_004108286.1 CDS Rpdx1_1942 NC_014834.1 2078023 2078427 D KEGG: bra:BRADO2934 putative signal peptide; hypothetical protein 2078023..2078427 Rhodopseudomonas palustris DX-1 10064152 YP_004108287.1 CDS Rpdx1_1943 NC_014834.1 2078477 2079652 R PFAM: amine oxidase; KEGG: bbt:BBta_5237 putative salicylate 1-monooxygenase; amine oxidase complement(2078477..2079652) Rhodopseudomonas palustris DX-1 10064153 YP_004108288.1 CDS Rpdx1_1944 NC_014834.1 2079689 2079934 R KEGG: bja:bsr5590 hypothetical protein; hypothetical protein complement(2079689..2079934) Rhodopseudomonas palustris DX-1 10064154 YP_004108289.1 CDS Rpdx1_1945 NC_014834.1 2080145 2081293 D KEGG: bbt:BBta_5235 hypothetical protein; hypothetical protein 2080145..2081293 Rhodopseudomonas palustris DX-1 10064155 YP_004108290.1 CDS Rpdx1_1946 NC_014834.1 2081462 2082214 D PFAM: alpha/beta hydrolase fold; KEGG: bja:bll5588 hypothetical protein; alpha/beta hydrolase fold protein 2081462..2082214 Rhodopseudomonas palustris DX-1 10064156 YP_004108291.1 CDS Rpdx1_1947 NC_014834.1 2082449 2083276 D KEGG: bbt:BBta_5231 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine O-acetyltransferase 2082449..2083276 Rhodopseudomonas palustris DX-1 10064157 YP_004108292.1 CDS Rpdx1_1948 NC_014834.1 2083461 2083679 D KEGG: nha:Nham_2578 hypothetical protein; hypothetical protein 2083461..2083679 Rhodopseudomonas palustris DX-1 10064158 YP_004108293.1 CDS Rpdx1_1949 NC_014834.1 2083694 2084326 R KEGG: bra:BRADO2942 hypothetical protein; hypothetical protein complement(2083694..2084326) Rhodopseudomonas palustris DX-1 10064159 YP_004108294.1 CDS Rpdx1_1950 NC_014834.1 2084595 2084933 D KEGG: nwi:Nwi_2173 hypothetical protein; hypothetical protein 2084595..2084933 Rhodopseudomonas palustris DX-1 10064160 YP_004108295.1 CDS Rpdx1_1951 NC_014834.1 2084993 2085523 D KEGG: nha:Nham_2575 carbonic anhydrase; carbonic anhydrase 2084993..2085523 Rhodopseudomonas palustris DX-1 10064161 YP_004108296.1 CDS Rpdx1_1952 NC_014834.1 2085552 2085719 R manually curated; KEGG: bra:BRADO2945 hypothetical protein; hypothetical protein complement(2085552..2085719) Rhodopseudomonas palustris DX-1 10064162 YP_004108297.1 CDS Rpdx1_1953 NC_014834.1 2085649 2085921 R KEGG: bja:blr5580 hypothetical protein; hypothetical protein complement(2085649..2085921) Rhodopseudomonas palustris DX-1 10064163 YP_004108298.1 CDS Rpdx1_1954 NC_014834.1 2086139 2087632 R PFAM: porin; KEGG: bbt:BBta_3063 porin precursor domain-containing protein; porin complement(2086139..2087632) Rhodopseudomonas palustris DX-1 10064164 YP_004108299.1 CDS Rpdx1_1955 NC_014834.1 2088156 2088743 D KEGG: bja:blr4984 transcriptional regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 2088156..2088743 Rhodopseudomonas palustris DX-1 10064165 YP_004108300.1 CDS Rpdx1_1956 NC_014834.1 2089324 2089497 D KEGG: tet:TTHERM_00998850 hypothetical protein; hypothetical protein 2089324..2089497 Rhodopseudomonas palustris DX-1 10064166 YP_004108301.1 CDS Rpdx1_1957 NC_014834.1 2089527 2089892 D KEGG: bbt:BBta_3101 hypothetical protein; hypothetical protein 2089527..2089892 Rhodopseudomonas palustris DX-1 10064167 YP_004108302.1 CDS Rpdx1_1958 NC_014834.1 2090156 2090431 D KEGG: bja:blr0365 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 2090156..2090431 Rhodopseudomonas palustris DX-1 10064168 YP_004108303.1 CDS Rpdx1_1959 NC_014834.1 2090521 2090658 R KEGG: bbt:BBta_2403 hypothetical protein; hypothetical protein complement(2090521..2090658) Rhodopseudomonas palustris DX-1 10064169 YP_004108304.1 CDS Rpdx1_1960 NC_014834.1 2091307 2091924 R KEGG: bbt:BBta_5218 hypothetical protein; hypothetical protein complement(2091307..2091924) Rhodopseudomonas palustris DX-1 10064170 YP_004108305.1 CDS Rpdx1_1961 NC_014834.1 2092256 2092867 R PFAM: type IV pilus assembly PilZ; KEGG: bja:blr5568 hypothetical protein; type IV pilus assembly PilZ complement(2092256..2092867) Rhodopseudomonas palustris DX-1 10064171 YP_004108306.1 CDS Rpdx1_1962 NC_014834.1 2093231 2093995 D KEGG: bja:blr0395 hypothetical protein; putative Crp/Fnr family transcriptional regulator 2093231..2093995 Rhodopseudomonas palustris DX-1 10064172 YP_004108307.1 CDS Rpdx1_1963 NC_014834.1 2093977 2094534 R PFAM: protein of unknown function DUF1457; KEGG: nha:Nham_1646 hypothetical protein; hypothetical protein complement(2093977..2094534) Rhodopseudomonas palustris DX-1 10064173 YP_004108308.1 CDS Rpdx1_1964 NC_014834.1 2095093 2095857 D PFAM: Rhomboid family protein; KEGG: nha:Nham_1648 rhomboid-like protein; rhomboid family protein 2095093..2095857 Rhodopseudomonas palustris DX-1 10064174 YP_004108309.1 CDS Rpdx1_1965 NC_014834.1 2096092 2096520 D KEGG: bja:bll5551 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; hypothetical protein 2096092..2096520 Rhodopseudomonas palustris DX-1 10064175 YP_004108310.1 CDS Rpdx1_1966 NC_014834.1 2096542 2097177 R PFAM: regulatory protein TetR; KEGG: bbt:BBta_7041 TetR family transcriptional regulator; regulatory protein TetR complement(2096542..2097177) Rhodopseudomonas palustris DX-1 10064176 YP_004108311.1 CDS Rpdx1_1968 NC_014834.1 2099617 2100732 D KEGG: bbt:BBta_7043 putative uncharacterized iron-regulated membrane protein; putative iron-regulated membrane protein 2099617..2100732 Rhodopseudomonas palustris DX-1 10064178 YP_004108312.1 CDS Rpdx1_1969 NC_014834.1 2100729 2100941 D KEGG: apt:APA01_13520 hypothetical protein; hypothetical protein 2100729..2100941 Rhodopseudomonas palustris DX-1 10064179 YP_004108313.1 CDS Rpdx1_1970 NC_014834.1 2100964 2101995 R PFAM: Patatin; KEGG: nha:Nham_1650 patatin; patatin complement(2100964..2101995) Rhodopseudomonas palustris DX-1 10064180 YP_004108314.1 CDS Rpdx1_1971 NC_014834.1 2102149 2103288 D KEGG: nha:Nham_1651 hypothetical protein; hypothetical protein 2102149..2103288 Rhodopseudomonas palustris DX-1 10064181 YP_004108315.1 CDS Rpdx1_1972 NC_014834.1 2103470 2105962 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bja:bll5542 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase 2103470..2105962 Rhodopseudomonas palustris DX-1 10064182 YP_004108316.1 CDS Rpdx1_1974 NC_014834.1 2107987 2108496 R PFAM: nitroreductase; KEGG: bja:blr5540 hypothetical protein; nitroreductase complement(2107987..2108496) Rhodopseudomonas palustris DX-1 10064184 YP_004108317.1 CDS Rpdx1_1975 NC_014834.1 2108835 2109413 D KEGG: oca:OCAR_5107 hypothetical protein; hypothetical protein 2108835..2109413 Rhodopseudomonas palustris DX-1 10064185 YP_004108318.1 CDS Rpdx1_1976 NC_014834.1 2109493 2109861 D KEGG: neu:NE1587 helix-hairpin-helix DNA-binding motif-containing protein; putative transcriptional regulator with HTH domain 2109493..2109861 Rhodopseudomonas palustris DX-1 10064186 YP_004108319.1 CDS Rpdx1_1977 NC_014834.1 2109878 2111959 R KEGG: bra:BRADO2971 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain protein; Anticodon-binding domain protein; threonyl-tRNA synthetase complement(2109878..2111959) Rhodopseudomonas palustris DX-1 10064187 YP_004108320.1 CDS Rpdx1_1978 NC_014834.1 2112153 2113301 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll5536 major facilitator superfamily transporter; major facilitator superfamily protein 2112153..2113301 Rhodopseudomonas palustris DX-1 10064188 YP_004108321.1 CDS Rpdx1_1979 NC_014834.1 2113222 2113518 R KEGG: clo:HMPREF0868_0929 hypothetical protein; hypothetical protein complement(2113222..2113518) Rhodopseudomonas palustris DX-1 10064189 YP_004108322.1 CDS Rpdx1_1980 NC_014834.1 2113663 2114319 R PFAM: O-methyltransferase family 3; KEGG: bte:BTH_II0913 O-methyltransferase; O-methyltransferase family protein complement(2113663..2114319) Rhodopseudomonas palustris DX-1 10064190 YP_004108323.1 CDS Rpdx1_1981 NC_014834.1 2114416 2115048 D PFAM: regulatory protein TetR; KEGG: bja:blr4230 transcriptional regulatory protein; regulatory protein TetR 2114416..2115048 Rhodopseudomonas palustris DX-1 10064191 YP_004108324.1 CDS Rpdx1_1982 NC_014834.1 2115065 2115478 D KEGG: cak:Caul_4714 hypothetical protein; hypothetical protein 2115065..2115478 Rhodopseudomonas palustris DX-1 10064192 YP_004108325.1 CDS Rpdx1_1983 NC_014834.1 2115468 2115665 R KEGG: sak:SAK_0962 TenA/THI-4 family protein; TenA/THI-4 family protein complement(2115468..2115665) Rhodopseudomonas palustris DX-1 10064193 YP_004108326.1 CDS Rpdx1_1984 NC_014834.1 2115767 2116000 R KEGG: bbt:BBta_7551 hypothetical protein; hypothetical protein complement(2115767..2116000) Rhodopseudomonas palustris DX-1 10064194 YP_004108327.1 CDS Rpdx1_1985 NC_014834.1 2116101 2116310 R KEGG: nwi:Nwi_2375 cold-shock protein, DNA-binding; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(2116101..2116310) Rhodopseudomonas palustris DX-1 10064195 YP_004108328.1 CDS Rpdx1_1986 NC_014834.1 2116587 2117840 D PFAM: Citrate transporter; KEGG: bra:BRADO3240 putative arsenite permease; citrate transporter 2116587..2117840 Rhodopseudomonas palustris DX-1 10064196 YP_004108329.1 CDS Rpdx1_1987 NC_014834.1 2117995 2118720 D KEGG: bra:BRADO3451 putative signal peptide; hypothetical protein 2117995..2118720 Rhodopseudomonas palustris DX-1 10064197 YP_004108330.1 CDS Rpdx1_1988 NC_014834.1 2118707 2119108 R PFAM: protein of unknown function DUF37; KEGG: bja:blr5525 hypothetical protein; hypothetical protein complement(2118707..2119108) Rhodopseudomonas palustris DX-1 10064198 YP_004108331.1 CDS Rpdx1_1989 NC_014834.1 2119349 2120239 D KEGG: nha:Nham_1655 hypothetical protein; hypothetical protein 2119349..2120239 Rhodopseudomonas palustris DX-1 10064199 YP_004108332.1 CDS Rpdx1_1990 NC_014834.1 2120383 2120835 R PFAM: nitrogen-fixing NifU domain protein; KEGG: bra:BRADO2983 hypothetical protein; nitrogen-fixing NifU domain-containing protein complement(2120383..2120835) Rhodopseudomonas palustris DX-1 10064200 YP_004108333.1 CDS Rpdx1_1991 NC_014834.1 2121103 2121792 D TIGRFAM: GTP cyclohydrolase I; KEGG: bja:bll5522 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; GTP cyclohydrolase I 2121103..2121792 Rhodopseudomonas palustris DX-1 10064201 YP_004108334.1 CDS Rpdx1_1992 NC_014834.1 2121821 2122276 D manually curated; KEGG: nha:Nham_1658 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 2121821..2122276 Rhodopseudomonas palustris DX-1 10064202 YP_004108335.1 CDS Rpdx1_1993 NC_014834.1 2122286 2122993 R KEGG: mpo:Mpop_3241 hypothetical protein; hypothetical protein complement(2122286..2122993) Rhodopseudomonas palustris DX-1 10064203 YP_004108336.1 CDS Rpdx1_1994 NC_014834.1 2123207 2124250 D PFAM: Lytic transglycosylase catalytic; KEGG: bja:bll5520 hypothetical protein; lytic transglycosylase 2123207..2124250 Rhodopseudomonas palustris DX-1 10064204 YP_004108337.1 CDS Rpdx1_1995 NC_014834.1 2124259 2125206 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpo:Mpop_1559 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2124259..2125206) Rhodopseudomonas palustris DX-1 10064205 YP_004108338.1 CDS Rpdx1_1996 NC_014834.1 2125285 2126958 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: azc:AZC_3883 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2125285..2126958) Rhodopseudomonas palustris DX-1 10064206 YP_004108339.1 CDS Rpdx1_1997 NC_014834.1 2127019 2127855 R KEGG: mpo:Mpop_3784 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2127019..2127855) Rhodopseudomonas palustris DX-1 10064207 YP_004108340.1 CDS Rpdx1_1998 NC_014834.1 2127852 2128844 R KEGG: bav:BAV2580 ABC transporter, substrate binding protein; hypothetical protein complement(2127852..2128844) Rhodopseudomonas palustris DX-1 10064208 YP_004108341.1 CDS Rpdx1_1999 NC_014834.1 2128880 2129716 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pnu:Pnuc_1186 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(2128880..2129716) Rhodopseudomonas palustris DX-1 10064209 YP_004108342.1 CDS Rpdx1_2000 NC_014834.1 2130042 2131211 D PFAM: Protein of unknown function DUF2336; KEGG: bja:bll5519 hypothetical protein; hypothetical protein 2130042..2131211 Rhodopseudomonas palustris DX-1 10064210 YP_004108343.1 CDS Rpdx1_2001 NC_014834.1 2131358 2131948 R PFAM: Hpt domain protein; KEGG: bja:blr5518 hypothetical protein; Hpt domain-containing protein complement(2131358..2131948) Rhodopseudomonas palustris DX-1 10064211 YP_004108344.1 CDS Rpdx1_2002 NC_014834.1 2131966 2132511 R KEGG: bja:blr5517 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(2131966..2132511) Rhodopseudomonas palustris DX-1 10064212 YP_004108345.1 CDS Rpdx1_2003 NC_014834.1 2132730 2132933 D KEGG: mpd:MCP_2871 hypothetical protein; hypothetical protein 2132730..2132933 Rhodopseudomonas palustris DX-1 10064213 YP_004108346.1 CDS Rpdx1_2004 NC_014834.1 2133133 2133309 D hypothetical protein 2133133..2133309 Rhodopseudomonas palustris DX-1 10064214 YP_004108347.1 CDS Rpdx1_2005 NC_014834.1 2133438 2134265 R PFAM: ATP-NAD/AcoX kinase; KEGG: nha:Nham_1663 inorganic polyphosphate/ATP-NAD kinase; ATP-NAD/AcoX kinase complement(2133438..2134265) Rhodopseudomonas palustris DX-1 10064215 YP_004108348.1 CDS Rpdx1_2006 NC_014834.1 2134451 2134870 D KEGG: nha:Nham_1665 hypothetical protein; hypothetical protein 2134451..2134870 Rhodopseudomonas palustris DX-1 10064216 YP_004108349.1 CDS Rpdx1_2007 NC_014834.1 2135050 2135772 D KEGG: nha:Nham_1666 OmpA-like transmembrane region; OmpA-like transmembrane region 2135050..2135772 Rhodopseudomonas palustris DX-1 10064217 YP_004108350.1 CDS Rpdx1_2008 NC_014834.1 2135948 2136073 D hypothetical protein 2135948..2136073 Rhodopseudomonas palustris DX-1 10064218 YP_004108351.1 CDS Rpdx1_2009 NC_014834.1 2136241 2136354 D KEGG: hvo:HVO_A0154 sodium/solute symporter; sodium/solute symporter 2136241..2136354 Rhodopseudomonas palustris DX-1 10064219 YP_004108352.1 CDS Rpdx1_2010 NC_014834.1 2136315 2136542 R KEGG: pcs:Pc12g05190 Pc12g05190; hypothetical protein complement(2136315..2136542) Rhodopseudomonas palustris DX-1 10064220 YP_004108353.1 CDS Rpdx1_2011 NC_014834.1 2136963 2137544 D KEGG: bja:bll4036 hypothetical protein; hypothetical protein 2136963..2137544 Rhodopseudomonas palustris DX-1 10064221 YP_004108354.1 CDS Rpdx1_2012 NC_014834.1 2137715 2138161 D PFAM: BLUF domain protein; KEGG: met:M446_1828 BLUF domain-containing protein; BLUF domain-containing protein 2137715..2138161 Rhodopseudomonas palustris DX-1 10064222 YP_004108355.1 CDS Rpdx1_2013 NC_014834.1 2138671 2139123 R KEGG: ilo:IL1489 hypothetical protein; hypothetical protein complement(2138671..2139123) Rhodopseudomonas palustris DX-1 10064223 YP_004108356.1 CDS Rpdx1_2014 NC_014834.1 2139404 2139841 D KEGG: syf:Synpcc7942_1587 integral membrane protein-like; manually curated; PFAM: protein of unknown function DUF1036; hypothetical protein 2139404..2139841 Rhodopseudomonas palustris DX-1 10064224 YP_004108357.1 CDS Rpdx1_2015 NC_014834.1 2139843 2140490 R KEGG: lma:L5683.01 hypothetical protein; hypothetical protein complement(2139843..2140490) Rhodopseudomonas palustris DX-1 10064225 YP_004108358.1 CDS Rpdx1_2016 NC_014834.1 2140507 2141844 R KEGG: bgl:bglu_2g14830 hypothetical protein; hypothetical protein complement(2140507..2141844) Rhodopseudomonas palustris DX-1 10064226 YP_004108359.1 CDS Rpdx1_2018 NC_014834.1 2143291 2143770 D KEGG: oca:OCAR_5638 hypothetical protein; hypothetical protein 2143291..2143770 Rhodopseudomonas palustris DX-1 10064229 YP_004108360.1 CDS Rpdx1_2019 NC_014834.1 2143828 2144331 D KEGG: nha:Nham_2509 hypothetical protein; hypothetical protein 2143828..2144331 Rhodopseudomonas palustris DX-1 10064230 YP_004108361.1 CDS Rpdx1_2020 NC_014834.1 2144354 2145181 R KEGG: nha:Nham_2508 RNA methyltransferase TrmH, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; TrmH family RNA methyltransferase complement(2144354..2145181) Rhodopseudomonas palustris DX-1 10064231 YP_004108362.1 CDS Rpdx1_2021 NC_014834.1 2146126 2146407 R KEGG: bbt:BBta_1063 hypothetical protein; hypothetical protein complement(2146126..2146407) Rhodopseudomonas palustris DX-1 10064233 YP_004108363.1 CDS Rpdx1_2022 NC_014834.1 2146654 2146905 R KEGG: bbt:BBta_1027 hypothetical protein; hypothetical protein complement(2146654..2146905) Rhodopseudomonas palustris DX-1 10064234 YP_004108364.1 CDS Rpdx1_2023 NC_014834.1 2147668 2148888 D PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bbt:BBta_1028 putative capsule polysaccharide export outer membrane protein; polysaccharide export protein 2147668..2148888 Rhodopseudomonas palustris DX-1 10064235 YP_004108365.1 CDS Rpdx1_2024 NC_014834.1 2148885 2150351 D PFAM: O-antigen polymerase; KEGG: bbt:BBta_1029 putative O-antigen polymerase, putative membrane protein; O-antigen polymerase 2148885..2150351 Rhodopseudomonas palustris DX-1 10064236 YP_004108366.1 CDS Rpdx1_2025 NC_014834.1 2150428 2151090 R KEGG: bbt:BBta_1030 hypothetical protein; hypothetical protein complement(2150428..2151090) Rhodopseudomonas palustris DX-1 10064237 YP_004108367.1 CDS Rpdx1_2026 NC_014834.1 2151538 2151702 R KEGG: mav:MAV_0960 hypothetical protein; hypothetical protein complement(2151538..2151702) Rhodopseudomonas palustris DX-1 10064238 YP_004108368.1 CDS Rpdx1_2027 NC_014834.1 2151797 2152471 R KEGG: bra:BRADO4757 exopolysaccharide production protein ExoY; PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase complement(2151797..2152471) Rhodopseudomonas palustris DX-1 10064239 YP_004108369.1 CDS Rpdx1_2028 NC_014834.1 2153113 2153826 R KEGG: bbt:BBta_1033 hypothetical protein; hypothetical protein complement(2153113..2153826) Rhodopseudomonas palustris DX-1 10064240 YP_004108370.1 CDS Rpdx1_2029 NC_014834.1 2153826 2156174 R KEGG: bbt:BBta_1034 putative tyrosine-protein kinase injvolved in exopolysaccharide polymerization; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein complement(2153826..2156174) Rhodopseudomonas palustris DX-1 10064241 YP_004108371.1 CDS Rpdx1_2030 NC_014834.1 2156233 2156871 R KEGG: bbt:BBta_1035 hypothetical protein; hypothetical protein complement(2156233..2156871) Rhodopseudomonas palustris DX-1 10064242 YP_004108372.1 CDS Rpdx1_2031 NC_014834.1 2157120 2157896 D PFAM: metallophosphoesterase; KEGG: bbt:BBta_1036 putative serine/threonine protein phosphatase; metallophosphoesterase 2157120..2157896 Rhodopseudomonas palustris DX-1 10064243 YP_004108373.1 CDS Rpdx1_2032 NC_014834.1 2157893 2159011 R PFAM: glycosyl transferase group 1; KEGG: bbt:BBta_1037 putative glycosyltransferase group 1 family protein; glycosyl transferase group 1 protein complement(2157893..2159011) Rhodopseudomonas palustris DX-1 10064244 YP_004108374.1 CDS Rpdx1_2033 NC_014834.1 2159041 2159784 R PFAM: glycosyl transferase family 25; KEGG: mpt:Mpe_A0728 glycosyltransferase involved in LPS biosynthesis-like protein; glycosyl transferase family protein complement(2159041..2159784) Rhodopseudomonas palustris DX-1 10064245 YP_004108375.1 CDS Rpdx1_2034 NC_014834.1 2159926 2161071 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mes:Meso_2584 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(2159926..2161071) Rhodopseudomonas palustris DX-1 10064246 YP_004108376.1 CDS Rpdx1_2035 NC_014834.1 2161579 2162715 D PFAM: acyltransferase 3; KEGG: xau:Xaut_4681 acyltransferase 3; acyltransferase 3 2161579..2162715 Rhodopseudomonas palustris DX-1 10064247 YP_004108377.1 CDS Rpdx1_2036 NC_014834.1 2162861 2164363 D PFAM: polysaccharide biosynthesis protein; KEGG: bbt:BBta_1044 hypothetical protein; polysaccharide biosynthesis protein 2162861..2164363 Rhodopseudomonas palustris DX-1 10064248 YP_004108378.1 CDS Rpdx1_2037 NC_014834.1 2164455 2165345 R PFAM: glycosyl transferase family 2; KEGG: family 2 glycosyl transferase; glycosyl transferase family 2 protein complement(2164455..2165345) Rhodopseudomonas palustris DX-1 10064249 YP_004108379.1 CDS Rpdx1_2038 NC_014834.1 2165368 2166468 R KEGG: bbt:BBta_1042 putative glycosyl transferase group 1; manually curated; PFAM: glycosyl transferase group 1; glycosyl transferase group 1 protein complement(2165368..2166468) Rhodopseudomonas palustris DX-1 10064250 YP_004108380.1 CDS Rpdx1_2039 NC_014834.1 2166948 2168393 D KEGG: bbt:BBta_1039 hypothetical protein; hypothetical protein 2166948..2168393 Rhodopseudomonas palustris DX-1 10064251 YP_004108381.1 CDS Rpdx1_2040 NC_014834.1 2168385 2170133 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; GMC oxidoreductase; KEGG: mes:Meso_2585 glucose-methanol-choline oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2168385..2170133) Rhodopseudomonas palustris DX-1 10064252 YP_004108382.1 CDS Rpdx1_2041 NC_014834.1 2170143 2170403 R hypothetical protein complement(2170143..2170403) Rhodopseudomonas palustris DX-1 10064253 YP_004108383.1 CDS Rpdx1_2042 NC_014834.1 2170466 2172283 R PFAM: glycoside hydrolase family 10; KEGG: bbt:BBta_1040 hypothetical protein; glycoside hydrolase family protein complement(2170466..2172283) Rhodopseudomonas palustris DX-1 10064254 YP_004108384.1 CDS Rpdx1_2043 NC_014834.1 2172372 2173511 R PFAM: acyltransferase 3; KEGG: rle:RL3831 putative O-acetyl transferase; acyltransferase 3 complement(2172372..2173511) Rhodopseudomonas palustris DX-1 10064255 YP_004108385.1 CDS Rpdx1_2044 NC_014834.1 2174028 2175941 D KEGG: bph:Bphy_1672 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; amino acid adenylation domain-containing protein 2174028..2175941 Rhodopseudomonas palustris DX-1 10064256 YP_004108386.1 CDS Rpdx1_2045 NC_014834.1 2175964 2184015 D KEGG: bid:Bind_0846 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase ; Acyl transferase; phosphopantetheine-binding; aminotransferase class-III; condensation domain protein; amino acid adenylation domain-containing protein 2175964..2184015 Rhodopseudomonas palustris DX-1 10064257 YP_004108387.1 CDS Rpdx1_2046 NC_014834.1 2184012 2186327 D PFAM: condensation domain protein; Thioesterase; KEGG: bph:Bphy_1673 condensation domain-containing protein; condensation domain-containing protein 2184012..2186327 Rhodopseudomonas palustris DX-1 10064258 YP_004108388.1 CDS Rpdx1_2047 NC_014834.1 2186423 2187505 D KEGG: msl:Msil_1245 platelet-activating factor acetylhydrolase plasma/intracellular isoform II; hypothetical protein 2186423..2187505 Rhodopseudomonas palustris DX-1 10064259 YP_004108389.1 CDS Rpdx1_2048 NC_014834.1 2187521 2188225 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: mrd:Mrad2831_0013 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 2187521..2188225 Rhodopseudomonas palustris DX-1 10064260 YP_004108390.1 CDS Rpdx1_2049 NC_014834.1 2188428 2188616 D KEGG: isc:IscW_ISCW017114 coagulation factor precursor, putative; hypothetical protein 2188428..2188616 Rhodopseudomonas palustris DX-1 10064261 YP_004108391.1 CDS Rpdx1_2050 NC_014834.1 2188789 2189130 D KEGG: ppg:PputGB1_2551 curlin-associated protein; hypothetical protein 2188789..2189130 Rhodopseudomonas palustris DX-1 10064262 YP_004108392.1 CDS Rpdx1_2051 NC_014834.1 2189271 2189654 D KEGG: dre:570672 si:dkey-90n12.3; hypothetical protein 2189271..2189654 Rhodopseudomonas palustris DX-1 10064263 YP_004108393.1 CDS Rpdx1_2052 NC_014834.1 2189882 2190757 R KEGG: mpo:Mpop_0030 curli production assembly/transport component CsgG; manually curated; PFAM: Curli production assembly/transport component CsgG; curli production assembly/transport component CsgG complement(2189882..2190757) Rhodopseudomonas palustris DX-1 10064264 YP_004108394.1 CDS Rpdx1_2053 NC_014834.1 2190814 2191098 R PFAM: Curli production assembly/transport component CsgF; KEGG: pen:PSEEN2838 curli production assembly/transport component CsgF precursor; curli production assembly/transport component CsgF complement(2190814..2191098) Rhodopseudomonas palustris DX-1 10064265 YP_004108395.1 CDS Rpdx1_2054 NC_014834.1 2191132 2191662 R KEGG: rso:RS03668 putative hemolysin-type protein; hypothetical protein complement(2191132..2191662) Rhodopseudomonas palustris DX-1 10064266 YP_004108396.1 CDS Rpdx1_2055 NC_014834.1 2191647 2191931 R KEGG: rsq:Rsph17025_3601 hypothetical protein; hypothetical protein complement(2191647..2191931) Rhodopseudomonas palustris DX-1 10064267 YP_004108397.1 CDS Rpdx1_2056 NC_014834.1 2192586 2194337 D PFAM: Curlin associated repeat protein; KEGG: mmi:MMAR_2591 PPE family protein, PPE8; curlin associated repeat-containing protein 2192586..2194337 Rhodopseudomonas palustris DX-1 10064268 YP_004108398.1 CDS Rpdx1_2057 NC_014834.1 2194711 2195127 D KEGG: sli:Slin_5326 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2194711..2195127 Rhodopseudomonas palustris DX-1 10064269 YP_004108399.1 CDS Rpdx1_2058 NC_014834.1 2195522 2196007 R KEGG: bvi:Bcep1808_6712 hypothetical protein; hypothetical protein complement(2195522..2196007) Rhodopseudomonas palustris DX-1 10064270 YP_004108400.1 CDS Rpdx1_2059 NC_014834.1 2196398 2196880 R KEGG: csa:Csal_1569 Na(+)-translocating NADH-quinone reductase subunit A; hypothetical protein complement(2196398..2196880) Rhodopseudomonas palustris DX-1 10064271 YP_004108401.1 CDS Rpdx1_2060 NC_014834.1 2197574 2198437 D KEGG: ava:Ava_4835 hypothetical protein; hypothetical protein 2197574..2198437 Rhodopseudomonas palustris DX-1 10064272 YP_004108402.1 CDS Rpdx1_2061 NC_014834.1 2198791 2200584 D KEGG: rsq:Rsph17025_3294 hypothetical protein; hypothetical protein 2198791..2200584 Rhodopseudomonas palustris DX-1 10064273 YP_004108403.1 CDS Rpdx1_2062 NC_014834.1 2200828 2202261 D TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2200828..2202261 Rhodopseudomonas palustris DX-1 10064274 YP_004108404.1 CDS Rpdx1_2063 NC_014834.1 2202330 2203826 D KEGG: bra:BRADO0757 putative phosphomannomutase/phosphoglucomutase (PMM / PGM); PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphomannomutase 2202330..2203826 Rhodopseudomonas palustris DX-1 10064275 YP_004108405.1 CDS Rpdx1_2064 NC_014834.1 2203946 2204626 R manually curated; KEGG: bbt:BBta_1078 hypothetical protein; hypothetical protein complement(2203946..2204626) Rhodopseudomonas palustris DX-1 10064276 YP_004108406.1 CDS Rpdx1_2065 NC_014834.1 2205037 2205711 R PFAM: peptidase M50; KEGG: nha:Nham_1519 peptidase M50; peptidase M50 complement(2205037..2205711) Rhodopseudomonas palustris DX-1 10064277 YP_004108407.1 CDS Rpdx1_2066 NC_014834.1 2206119 2207237 D KEGG: mea:Mex_1p5255 serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; peptidase S1 and S6 chymotrypsin/Hap 2206119..2207237 Rhodopseudomonas palustris DX-1 10064278 YP_004108408.1 CDS Rpdx1_2067 NC_014834.1 2207307 2207519 D KEGG: oca:OCAR_7483 hypothetical protein; hypothetical protein 2207307..2207519 Rhodopseudomonas palustris DX-1 10064279 YP_004108409.1 CDS Rpdx1_2068 NC_014834.1 2207726 2208574 R KEGG: mpo:Mpop_2641 transglutaminase domain protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; transglutaminase domain-containing protein complement(2207726..2208574) Rhodopseudomonas palustris DX-1 10064280 YP_004108410.1 CDS Rpdx1_2069 NC_014834.1 2208734 2210938 R TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: msl:Msil_3793 glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX complement(2208734..2210938) Rhodopseudomonas palustris DX-1 10064281 YP_004108411.1 CDS Rpdx1_2070 NC_014834.1 2211194 2211754 R KEGG: bra:BRADO3437 hypothetical protein; hypothetical protein complement(2211194..2211754) Rhodopseudomonas palustris DX-1 10064282 YP_004108412.1 CDS Rpdx1_2071 NC_014834.1 2211769 2212278 R PFAM: protein of unknown function DUF892; KEGG: bja:bll7648 hypothetical protein; hypothetical protein complement(2211769..2212278) Rhodopseudomonas palustris DX-1 10064283 YP_004108413.1 CDS Rpdx1_2072 NC_014834.1 2213573 2214481 R KEGG: mjl:Mjls_2587 TetR family transcriptional regulator; hypothetical protein complement(2213573..2214481) Rhodopseudomonas palustris DX-1 10064285 YP_004108414.1 CDS Rpdx1_2073 NC_014834.1 2214850 2216769 R KEGG: rhi:NGR_c22390 putative ATP-dependent hydrolase protein; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; AAA ATPase complement(2214850..2216769) Rhodopseudomonas palustris DX-1 10064286 YP_004108415.1 CDS Rpdx1_2074 NC_014834.1 2216794 2217129 R KEGG: mch:Mchl_0986 hypothetical protein; hypothetical protein complement(2216794..2217129) Rhodopseudomonas palustris DX-1 10064287 YP_004108416.1 CDS Rpdx1_2075 NC_014834.1 2218320 2218601 D manually curated; PFAM: helix-turn-helix domain protein; KEGG: mno:Mnod_7736 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2218320..2218601 Rhodopseudomonas palustris DX-1 10064288 YP_004108417.1 CDS Rpdx1_2077 NC_014834.1 2219256 2219972 D KEGG: oca:OCAR_7680 hypothetical protein; hypothetical protein 2219256..2219972 Rhodopseudomonas palustris DX-1 10064290 YP_004108418.1 CDS Rpdx1_2078 NC_014834.1 2220681 2221865 D KEGG: azl:AZL_d04780 similar to UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase-like protein 2220681..2221865 Rhodopseudomonas palustris DX-1 10064291 YP_004108419.1 CDS Rpdx1_2079 NC_014834.1 2221862 2222149 R KEGG: tpd:Teth39_1006 hypothetical protein; hypothetical protein complement(2221862..2222149) Rhodopseudomonas palustris DX-1 10064292 YP_004108420.1 CDS Rpdx1_2080 NC_014834.1 2222578 2223273 R KEGG: btl:BALH_4300 collagen-like protein; hypothetical protein complement(2222578..2223273) Rhodopseudomonas palustris DX-1 10064293 YP_004108421.1 CDS Rpdx1_2081 NC_014834.1 2224130 2229205 D PFAM: RTX domain protein; Hemolysin-type calcium-binding region; KEGG: mlo:mll1028 rhizobiocin RzcA; RTX domain-containing protein 2224130..2229205 Rhodopseudomonas palustris DX-1 10064294 YP_004108422.1 CDS Rpdx1_2082 NC_014834.1 2229236 2231014 D TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; KEGG: mlo:mll1027 rhizobiocin secretion protein RspD; SMART: AAA ATPase; type I secretion system ATPase 2229236..2231014 Rhodopseudomonas palustris DX-1 10064295 YP_004108423.1 CDS Rpdx1_2083 NC_014834.1 2230989 2232356 D KEGG: mpo:Mpop_2544 type I secretion membrane fusion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; HlyD family type I secretion membrane fusion protein 2230989..2232356 Rhodopseudomonas palustris DX-1 10064296 YP_004108424.1 CDS Rpdx1_2085 NC_014834.1 2233968 2234687 D KEGG: nwi:Nwi_0627 LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; autoinducer-binding domain-containing protein 2233968..2234687 Rhodopseudomonas palustris DX-1 10064298 YP_004108425.1 CDS Rpdx1_2086 NC_014834.1 2234775 2235407 D PFAM: autoinducer synthesis protein; KEGG: nwi:Nwi_0626 autoinducer synthesis protein; autoinducer synthesis protein 2234775..2235407 Rhodopseudomonas palustris DX-1 10064299 YP_004108426.1 CDS Rpdx1_2087 NC_014834.1 2235918 2236343 R manually curated; KEGG: bja:blr6106 hypothetical protein; hypothetical protein complement(2235918..2236343) Rhodopseudomonas palustris DX-1 10064300 YP_004108427.1 CDS Rpdx1_2089 NC_014834.1 2237308 2237751 R PFAM: nuclease (SNase domain protein); KEGG: rle:RL2121 putative transmembrane protein; nuclease complement(2237308..2237751) Rhodopseudomonas palustris DX-1 10064302 YP_004108428.1 CDS Rpdx1_2090 NC_014834.1 2237762 2237965 R KEGG: nml:Namu_2040 3-oxoacyl-(acyl-carrier-protein) synthase III; hypothetical protein complement(2237762..2237965) Rhodopseudomonas palustris DX-1 10064303 YP_004108429.1 CDS Rpdx1_2091 NC_014834.1 2238054 2239205 R KEGG: jan:Jann_1534 response regulator receiver domain-containing protein; response regulator receiver domain-containing protein complement(2238054..2239205) Rhodopseudomonas palustris DX-1 10064304 YP_004108430.1 CDS Rpdx1_2093 NC_014834.1 2239657 2240637 R manually curated; KEGG: jan:Jann_1532 hypothetical protein; hypothetical protein complement(2239657..2240637) Rhodopseudomonas palustris DX-1 10064306 YP_004108431.1 CDS Rpdx1_2094 NC_014834.1 2240705 2240971 D PFAM: transposase IS3/IS911 family protein; KEGG: oan:Oant_4528 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2240705..2240971 Rhodopseudomonas palustris DX-1 10064307 YP_004108432.1 CDS Rpdx1_2095 NC_014834.1 2240965 2241894 D PFAM: Integrase catalytic region; KEGG: oan:Oant_4683 integrase catalytic region; Integrase catalytic subunit 2240965..2241894 Rhodopseudomonas palustris DX-1 10064308 YP_004108433.1 CDS Rpdx1_2096 NC_014834.1 2241779 2243905 R KEGG: pha:PSHAa2353 hypothetical protein; hypothetical protein complement(2241779..2243905) Rhodopseudomonas palustris DX-1 10064309 YP_004108434.1 CDS Rpdx1_2098 NC_014834.1 2245596 2247872 R PFAM: Protein of unknown function DUF2235; KEGG: nha:Nham_0079 hypothetical protein; hypothetical protein complement(2245596..2247872) Rhodopseudomonas palustris DX-1 10064311 YP_004108435.1 CDS Rpdx1_2100 NC_014834.1 2249480 2249728 D KEGG: bid:Bind_0645 hypothetical protein; hypothetical protein 2249480..2249728 Rhodopseudomonas palustris DX-1 10064313 YP_004108436.1 CDS Rpdx1_2102 NC_014834.1 2250337 2250708 R KEGG: bja:blr6106 hypothetical protein; hypothetical protein complement(2250337..2250708) Rhodopseudomonas palustris DX-1 10064315 YP_004108437.1 CDS Rpdx1_2103 NC_014834.1 2250928 2251527 D KEGG: cya:CYA_2444 hypothetical protein; hypothetical protein 2250928..2251527 Rhodopseudomonas palustris DX-1 10064316 YP_004108438.1 CDS Rpdx1_2105 NC_014834.1 2251854 2252921 D manually curated; KEGG: oca:OCAR_7650 hypothetical protein; hypothetical protein 2251854..2252921 Rhodopseudomonas palustris DX-1 10064318 YP_004108439.1 CDS Rpdx1_2107 NC_014834.1 2253415 2254083 D KEGG: fsu:Fisuc_1342 hypothetical protein; hypothetical protein 2253415..2254083 Rhodopseudomonas palustris DX-1 10064320 YP_004108440.1 CDS Rpdx1_2108 NC_014834.1 2254108 2255214 D KEGG: hmu:Hmuk_1375 hypothetical protein; hypothetical protein 2254108..2255214 Rhodopseudomonas palustris DX-1 10064321 YP_004108441.1 CDS Rpdx1_2110 NC_014834.1 2256558 2257397 D KEGG: nha:Nham_4291 hypothetical protein; hypothetical protein 2256558..2257397 Rhodopseudomonas palustris DX-1 10064323 YP_004108442.1 CDS Rpdx1_2111 NC_014834.1 2257394 2258473 D PFAM: Domain of unknown function DUF1814; KEGG: nha:Nham_4292 hypothetical protein; hypothetical protein 2257394..2258473 Rhodopseudomonas palustris DX-1 10064324 YP_004108443.1 CDS Rpdx1_2112 NC_014834.1 2258470 2259327 D KEGG: sjp:SJA_C1-20340 hypothetical protein; hypothetical protein 2258470..2259327 Rhodopseudomonas palustris DX-1 10064325 YP_004108444.1 CDS Rpdx1_2113 NC_014834.1 2259324 2259902 D KEGG: sjp:SJA_C1-20350 hypothetical protein; hypothetical protein 2259324..2259902 Rhodopseudomonas palustris DX-1 10064326 YP_004108445.1 CDS Rpdx1_2114 NC_014834.1 2259904 2263305 D PFAM: UvrD/REP helicase; protein of unknown function DUF955; KEGG: sjp:SJA_C1-20360 putative ATP-dependent DNA helicase; UvrD/REP helicase 2259904..2263305 Rhodopseudomonas palustris DX-1 10064327 YP_004108446.1 CDS Rpdx1_2115 NC_014834.1 2263387 2264133 D KEGG: hba:Hbal_0676 hypothetical protein; hypothetical protein 2263387..2264133 Rhodopseudomonas palustris DX-1 10064328 YP_004108447.1 CDS Rpdx1_2116 NC_014834.1 2264108 2265280 D PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: sjp:SJA_C1-20380 UBA/ThiF-type NAD/FAD binding fold protein; UBA/THIF-type NAD/FAD-binding protein 2264108..2265280 Rhodopseudomonas palustris DX-1 10064329 YP_004108448.1 CDS Rpdx1_2117 NC_014834.1 2265277 2265717 D KEGG: sjp:SJA_C1-20390 hypothetical protein; hypothetical protein 2265277..2265717 Rhodopseudomonas palustris DX-1 10064330 YP_004108449.1 CDS Rpdx1_2118 NC_014834.1 2265996 2266232 D PFAM: Protein of unknown function DUF2158; KEGG: avn:Avin_20850 hypothetical protein; hypothetical protein 2265996..2266232 Rhodopseudomonas palustris DX-1 10064331 YP_004108450.1 CDS Rpdx1_2119 NC_014834.1 2266244 2269348 D KEGG: scb:SCAB_29231 putative helicase; PFAM: DEAD/DEAH box helicase domain protein; peptidase C14 caspase catalytic subunit p20; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 2266244..2269348 Rhodopseudomonas palustris DX-1 10064332 YP_004108451.1 CDS Rpdx1_2120 NC_014834.1 2270116 2270871 R KEGG: cin:100177270 similar to predicted protein; hypothetical protein complement(2270116..2270871) Rhodopseudomonas palustris DX-1 10064333 YP_004108452.1 CDS Rpdx1_2121 NC_014834.1 2270873 2272330 R PFAM: MaoC domain protein dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: ttu:TERTU_2202 modular polyketide synthase, type I PKS; MaoC domain-containing protein dehydratase complement(2270873..2272330) Rhodopseudomonas palustris DX-1 10064334 YP_004108453.1 CDS Rpdx1_2122 NC_014834.1 2272357 2273472 R PFAM: glycosyl transferase group 1; KEGG: gvi:glr1065 glycosyltransferase; glycosyl transferase group 1 protein complement(2272357..2273472) Rhodopseudomonas palustris DX-1 10064335 YP_004108454.1 CDS Rpdx1_2123 NC_014834.1 2273469 2274314 R KEGG: glo:Glov_1521 hypothetical protein; hypothetical protein complement(2273469..2274314) Rhodopseudomonas palustris DX-1 10064336 YP_004108455.1 CDS Rpdx1_2124 NC_014834.1 2274349 2275539 R PFAM: glycosyl transferase group 1; KEGG: sus:Acid_4714 thioesterase; glycosyl transferase group 1 protein complement(2274349..2275539) Rhodopseudomonas palustris DX-1 10064337 YP_004108456.1 CDS Rpdx1_2125 NC_014834.1 2275539 2276729 R PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; KEGG: cth:Cthe_1905 glycosyl transferase family protein; glycosyl transferase family protein complement(2275539..2276729) Rhodopseudomonas palustris DX-1 10064338 YP_004108457.1 CDS Rpdx1_2126 NC_014834.1 2276729 2278663 R KEGG: sus:Acid_4716 FkbH like protein; TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; PFAM: phosphopantetheine-binding; FkbH-like protein complement(2276729..2278663) Rhodopseudomonas palustris DX-1 10064339 YP_004108458.1 CDS Rpdx1_2127 NC_014834.1 2278660 2279928 R PFAM: Glycosyltransferase 28 domain; KEGG: sit:TM1040_3688 hypothetical protein; glycosyltransferase family 28 protein complement(2278660..2279928) Rhodopseudomonas palustris DX-1 10064340 YP_004108459.1 CDS Rpdx1_2129 NC_014834.1 2281643 2290099 D manually curated; TIGRFAM: YD repeat protein; KEGG: cja:CJA_2623 rhs family protein; PFAM: YD repeat-containing protein; YD repeat-containing protein 2281643..2290099 Rhodopseudomonas palustris DX-1 10064342 YP_004108460.1 CDS Rpdx1_2130 NC_014834.1 2290400 2290669 D KEGG: rba:RB574 hypothetical protein; hypothetical protein 2290400..2290669 Rhodopseudomonas palustris DX-1 10064343 YP_004108461.1 CDS Rpdx1_2131 NC_014834.1 2290996 2292180 R PFAM: integrase family protein; KEGG: msl:Msil_2093 integrase family protein; integrase family protein complement(2290996..2292180) Rhodopseudomonas palustris DX-1 10064344 YP_004108462.1 CDS Rpdx1_2132 NC_014834.1 2292559 2293329 D KEGG: bbt:BBta_3799 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 2292559..2293329 Rhodopseudomonas palustris DX-1 10064346 YP_004108463.1 CDS Rpdx1_2133 NC_014834.1 2293338 2294114 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xau:Xaut_0903 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(2293338..2294114) Rhodopseudomonas palustris DX-1 10064347 YP_004108464.1 CDS Rpdx1_2134 NC_014834.1 2294129 2294956 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pla:Plav_0158 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2294129..2294956) Rhodopseudomonas palustris DX-1 10064348 YP_004108465.1 CDS Rpdx1_2135 NC_014834.1 2295105 2295527 R PFAM: MaoC domain protein dehydratase; KEGG: pla:Plav_0157 dehydratase; MaoC domain-containing protein dehydratase complement(2295105..2295527) Rhodopseudomonas palustris DX-1 10064349 YP_004108466.1 CDS Rpdx1_2136 NC_014834.1 2295524 2295970 R KEGG: pla:Plav_0156 hypothetical protein; hypothetical protein complement(2295524..2295970) Rhodopseudomonas palustris DX-1 10064350 YP_004108467.1 CDS Rpdx1_2137 NC_014834.1 2295981 2297165 R PFAM: Thiolase-like; KEGG: mpt:Mpe_A0178 lipid-transfer protein; Thiolase-like protein complement(2295981..2297165) Rhodopseudomonas palustris DX-1 10064351 YP_004108468.1 CDS Rpdx1_2138 NC_014834.1 2297292 2298074 D PFAM: regulatory protein TetR; KEGG: sus:Acid_5697 TetR family transcriptional regulator; TetR family transcriptional regulator 2297292..2298074 Rhodopseudomonas palustris DX-1 10064352 YP_004108469.1 CDS Rpdx1_2139 NC_014834.1 2297992 2299548 D KEGG: ctt:CtCNB1_1709 long-chain-fatty-acid--CoA ligase; manually curated; PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2297992..2299548 Rhodopseudomonas palustris DX-1 10064353 YP_004108470.1 CDS Rpdx1_2140 NC_014834.1 2299704 2301086 D KEGG: bvi:Bcep1808_1832 hypothetical protein; hypothetical protein 2299704..2301086 Rhodopseudomonas palustris DX-1 10064354 YP_004108471.1 CDS Rpdx1_2141 NC_014834.1 2301627 2302979 D PFAM: Extracellular ligand-binding receptor; KEGG: dsh:Dshi_1404 branched-chain amino acid ABC transporter; extracellular ligand-binding receptor 2301627..2302979 Rhodopseudomonas palustris DX-1 10064355 YP_004108472.1 CDS Rpdx1_2142 NC_014834.1 2303230 2304237 D PFAM: inner-membrane translocator; KEGG: sit:TM1040_1512 inner-membrane translocator; inner-membrane translocator 2303230..2304237 Rhodopseudomonas palustris DX-1 10064356 YP_004108473.1 CDS Rpdx1_2143 NC_014834.1 2304242 2305462 D PFAM: inner-membrane translocator; KEGG: sit:TM1040_1513 inner-membrane translocator; inner-membrane translocator 2304242..2305462 Rhodopseudomonas palustris DX-1 10064357 YP_004108474.1 CDS Rpdx1_2144 NC_014834.1 2305459 2306229 D KEGG: jan:Jann_1384 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2305459..2306229 Rhodopseudomonas palustris DX-1 10064358 YP_004108475.1 CDS Rpdx1_2145 NC_014834.1 2306226 2306978 D KEGG: jan:Jann_1385 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2306226..2306978 Rhodopseudomonas palustris DX-1 10064359 YP_004108476.1 CDS Rpdx1_2147 NC_014834.1 2307454 2308131 R PFAM: regulatory protein TetR; KEGG: bja:blr5456 transcriptional regulatory protein; regulatory protein TetR complement(2307454..2308131) Rhodopseudomonas palustris DX-1 10064361 YP_004108477.1 CDS Rpdx1_2148 NC_014834.1 2308373 2309605 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO3035 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2308373..2309605 Rhodopseudomonas palustris DX-1 10064362 YP_004108478.1 CDS Rpdx1_2149 NC_014834.1 2309757 2310815 D PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO3036 putative aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2309757..2310815 Rhodopseudomonas palustris DX-1 10064363 YP_004108479.1 CDS Rpdx1_2150 NC_014834.1 2311147 2311932 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO3041 putative short-chain dehydrogenase/reductase SDR family protein; short-chain dehydrogenase/reductase SDR complement(2311147..2311932) Rhodopseudomonas palustris DX-1 10064364 YP_004108480.1 CDS Rpdx1_2151 NC_014834.1 2312088 2312843 D PFAM: Phosphoglycerate mutase; KEGG: bja:bll5443 hypothetical protein; phosphoglycerate mutase 2312088..2312843 Rhodopseudomonas palustris DX-1 10064365 YP_004108481.1 CDS Rpdx1_2152 NC_014834.1 2312997 2313764 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO3043 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2312997..2313764 Rhodopseudomonas palustris DX-1 10064366 YP_004108482.1 CDS Rpdx1_2153 NC_014834.1 2314052 2315278 R PFAM: beta-lactamase; KEGG: bja:blr5441 hypothetical protein; beta-lactamase complement(2314052..2315278) Rhodopseudomonas palustris DX-1 10064367 YP_004108483.1 CDS Rpdx1_2154 NC_014834.1 2315465 2316655 D KEGG: bbt:BBta_5072 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; translation elongation factor Tu 2315465..2316655 Rhodopseudomonas palustris DX-1 10064368 YP_004108484.1 CDS Rpdx1_2155 NC_014834.1 2316775 2317089 D KEGG: xau:Xaut_3357 hypothetical protein; hypothetical protein 2316775..2317089 Rhodopseudomonas palustris DX-1 10064369 YP_004108485.1 CDS Rpdx1_2156 NC_014834.1 2317323 2318582 R KEGG: mei:Msip34_1578 hypothetical protein; hypothetical protein complement(2317323..2318582) Rhodopseudomonas palustris DX-1 10064371 YP_004108486.1 CDS Rpdx1_2157 NC_014834.1 2318661 2320943 R KEGG: nha:Nham_3719 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor complement(2318661..2320943) Rhodopseudomonas palustris DX-1 10064372 YP_004108487.1 CDS Rpdx1_2158 NC_014834.1 2321770 2321958 D KEGG: bja:bsl5417 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; preprotein translocase subunit SecE 2321770..2321958 Rhodopseudomonas palustris DX-1 10064373 YP_004108488.1 CDS Rpdx1_2159 NC_014834.1 2321976 2322506 D TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: nha:Nham_1526 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein; NusG antitermination factor 2321976..2322506 Rhodopseudomonas palustris DX-1 10064374 YP_004108489.1 CDS Rpdx1_2160 NC_014834.1 2322662 2323090 D TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: bja:bll5415 50S ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 2322662..2323090 Rhodopseudomonas palustris DX-1 10064375 YP_004108490.1 CDS Rpdx1_2161 NC_014834.1 2323097 2323786 D KEGG: bbt:BBta_5086 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; 50S ribosomal protein L1 2323097..2323786 Rhodopseudomonas palustris DX-1 10064376 YP_004108491.1 CDS Rpdx1_2162 NC_014834.1 2323891 2324850 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bra:BRADO3050 putative glyoxylate reductase (glycolate reductase); D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2323891..2324850 Rhodopseudomonas palustris DX-1 10064377 YP_004108492.1 CDS Rpdx1_2163 NC_014834.1 2325624 2326142 D PFAM: ribosomal protein L10; KEGG: nha:Nham_1529 50S ribosomal protein L10; 50S ribosomal protein L10 2325624..2326142 Rhodopseudomonas palustris DX-1 10064378 YP_004108493.1 CDS Rpdx1_2164 NC_014834.1 2326198 2326572 D KEGG: nha:Nham_1530 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 2326198..2326572 Rhodopseudomonas palustris DX-1 10064379 YP_004108494.1 CDS Rpdx1_2165 NC_014834.1 2327040 2331164 D KEGG: bra:BRADO3054 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; DNA-directed RNA polymerase subunit beta 2327040..2331164 Rhodopseudomonas palustris DX-1 10064380 YP_004108495.1 CDS Rpdx1_2166 NC_014834.1 2331311 2335513 D TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: nha:Nham_1532 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 2331311..2335513 Rhodopseudomonas palustris DX-1 10064381 YP_004108496.1 CDS Rpdx1_2167 NC_014834.1 2335817 2337880 D KEGG: bbt:BBta_5079 hypothetical protein; manually curated; PFAM: amine oxidase; Methyltransferase type 11; amine oxidase 2335817..2337880 Rhodopseudomonas palustris DX-1 10064382 YP_004108497.1 CDS Rpdx1_2168 NC_014834.1 2337997 2340096 D KEGG: bbt:BBta_5078 putative ABC transporter, ATPase and permease components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein 2337997..2340096 Rhodopseudomonas palustris DX-1 10064383 YP_004108498.1 CDS Rpdx1_2169 NC_014834.1 2340250 2340702 R KEGG: nha:Nham_3666 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator complement(2340250..2340702) Rhodopseudomonas palustris DX-1 10064384 YP_004108499.1 CDS Rpdx1_2170 NC_014834.1 2340845 2341273 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_5280 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase 2340845..2341273 Rhodopseudomonas palustris DX-1 10064385 YP_004108500.1 CDS Rpdx1_2171 NC_014834.1 2341523 2342731 D PFAM: major facilitator superfamily MFS_1; KEGG: smd:Smed_3859 major facilitator transporter; major facilitator superfamily protein 2341523..2342731 Rhodopseudomonas palustris DX-1 10064386 YP_004108501.1 CDS Rpdx1_2174 NC_014834.1 2343775 2344470 R PFAM: O-methyltransferase family 3; KEGG: msl:Msil_0886 O-methyltransferase family 3; O-methyltransferase family protein complement(2343775..2344470) Rhodopseudomonas palustris DX-1 10064389 YP_004108502.1 CDS Rpdx1_2175 NC_014834.1 2344607 2345428 D KEGG: msl:Msil_0885 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2344607..2345428 Rhodopseudomonas palustris DX-1 10064390 YP_004108503.1 CDS Rpdx1_2177 NC_014834.1 2346278 2347195 R KEGG: bja:blr2658 hypothetical protein; hypothetical protein complement(2346278..2347195) Rhodopseudomonas palustris DX-1 10064392 YP_004108504.1 CDS Rpdx1_2178 NC_014834.1 2348096 2348467 D KEGG: nha:Nham_1540 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; 30S ribosomal protein S12 2348096..2348467 Rhodopseudomonas palustris DX-1 10064393 YP_004108505.1 CDS Rpdx1_2179 NC_014834.1 2348483 2348953 D KEGG: nwi:Nwi_1360 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; 30S ribosomal protein S7 2348483..2348953 Rhodopseudomonas palustris DX-1 10064394 YP_004108506.1 CDS Rpdx1_2180 NC_014834.1 2348984 2351056 D KEGG: bbt:BBta_5073 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; translation elongation factor G 2348984..2351056 Rhodopseudomonas palustris DX-1 10064395 YP_004108507.1 CDS Rpdx1_2181 NC_014834.1 2351095 2352285 D KEGG: bbt:BBta_5072 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; translation elongation factor Tu 2351095..2352285 Rhodopseudomonas palustris DX-1 10064396 YP_004108508.1 CDS Rpdx1_2182 NC_014834.1 2352374 2352682 D KEGG: nha:Nham_1544 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; 30S ribosomal protein S10 2352374..2352682 Rhodopseudomonas palustris DX-1 10064397 YP_004108509.1 CDS Rpdx1_2183 NC_014834.1 2352733 2353458 D KEGG: bja:bll5400 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; 50S ribosomal protein L3 2352733..2353458 Rhodopseudomonas palustris DX-1 10064398 YP_004108510.1 CDS Rpdx1_2184 NC_014834.1 2353460 2354080 D PFAM: ribosomal protein L4/L1e; KEGG: bja:bll5399 50S ribosomal protein L4; 50S ribosomal protein L4 2353460..2354080 Rhodopseudomonas palustris DX-1 10064399 YP_004108511.1 CDS Rpdx1_2185 NC_014834.1 2354077 2354376 D PFAM: Ribosomal protein L25/L23; KEGG: bbt:BBta_5068 50S ribosomal protein L23; 50S ribosomal protein L25 2354077..2354376 Rhodopseudomonas palustris DX-1 10064400 YP_004108512.1 CDS Rpdx1_2186 NC_014834.1 2354390 2355226 D KEGG: oca:OCAR_5680 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; 50S ribosomal protein L2 2354390..2355226 Rhodopseudomonas palustris DX-1 10064401 YP_004108513.1 CDS Rpdx1_2187 NC_014834.1 2355238 2355516 D KEGG: bbt:BBta_5066 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; 30S ribosomal protein S19 2355238..2355516 Rhodopseudomonas palustris DX-1 10064402 YP_004108514.1 CDS Rpdx1_2188 NC_014834.1 2355527 2355910 D KEGG: oca:OCAR_5682 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; 50S ribosomal protein L22 2355527..2355910 Rhodopseudomonas palustris DX-1 10064403 YP_004108515.1 CDS Rpdx1_2189 NC_014834.1 2355933 2356640 D TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: bja:bll5394 30S ribosomal protein S3; SMART: KH domain protein; 30S ribosomal protein S3 2355933..2356640 Rhodopseudomonas palustris DX-1 10064404 YP_004108516.1 CDS Rpdx1_2190 NC_014834.1 2356673 2357086 D KEGG: bra:BRADO3073 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 2356673..2357086 Rhodopseudomonas palustris DX-1 10064405 YP_004108517.1 CDS Rpdx1_2191 NC_014834.1 2357092 2357301 D KEGG: bbt:BBta_5062 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; 50S ribosomal protein L29 2357092..2357301 Rhodopseudomonas palustris DX-1 10064406 YP_004108518.1 CDS Rpdx1_2192 NC_014834.1 2357314 2357562 D KEGG: nha:Nham_1554 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; 30S ribosomal protein S17 2357314..2357562 Rhodopseudomonas palustris DX-1 10064407 YP_004108519.1 CDS Rpdx1_2193 NC_014834.1 2357626 2357994 D KEGG: bbt:BBta_5060 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; 50S ribosomal protein L14 2357626..2357994 Rhodopseudomonas palustris DX-1 10064408 YP_004108520.1 CDS Rpdx1_2194 NC_014834.1 2357994 2358308 D TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: bja:bll5389 50S ribosomal protein L24; SMART: KOW domain protein; 50S ribosomal protein L24 2357994..2358308 Rhodopseudomonas palustris DX-1 10064409 YP_004108521.1 CDS Rpdx1_2195 NC_014834.1 2358301 2358858 D KEGG: bbt:BBta_5058 50S ribosomal protein L5; 50S ribosomal protein L5 2358301..2358858 Rhodopseudomonas palustris DX-1 10064410 YP_004108522.1 CDS Rpdx1_2196 NC_014834.1 2358902 2359207 D PFAM: ribosomal protein S14; KEGG: bbt:BBta_5057 30S ribosomal protein S14; 30S ribosomal protein S14 2358902..2359207 Rhodopseudomonas palustris DX-1 10064411 YP_004108523.1 CDS Rpdx1_2197 NC_014834.1 2359220 2359618 D PFAM: ribosomal protein S8; KEGG: nwi:Nwi_1378 30S ribosomal protein S8; 30S ribosomal protein S8 2359220..2359618 Rhodopseudomonas palustris DX-1 10064412 YP_004108524.1 CDS Rpdx1_2198 NC_014834.1 2359731 2360264 D KEGG: bbt:BBta_5055 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 2359731..2360264 Rhodopseudomonas palustris DX-1 10064413 YP_004108525.1 CDS Rpdx1_2199 NC_014834.1 2360276 2360638 D KEGG: nwi:Nwi_1380 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; 50S ribosomal protein L18 2360276..2360638 Rhodopseudomonas palustris DX-1 10064414 YP_004108526.1 CDS Rpdx1_2200 NC_014834.1 2360699 2361274 D KEGG: nwi:Nwi_1381 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; 30S ribosomal protein S5 2360699..2361274 Rhodopseudomonas palustris DX-1 10064415 YP_004108527.1 CDS Rpdx1_2201 NC_014834.1 2361334 2361528 D KEGG: nwi:Nwi_1382 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; 50S ribosomal protein L30 2361334..2361528 Rhodopseudomonas palustris DX-1 10064416 YP_004108528.1 CDS Rpdx1_2202 NC_014834.1 2361541 2362026 D TIGRFAM: ribosomal protein L15; KEGG: bbt:BBta_5051 50S ribosomal protein L15; 50S ribosomal protein L15 2361541..2362026 Rhodopseudomonas palustris DX-1 10064417 YP_004108529.1 CDS Rpdx1_2203 NC_014834.1 2362179 2363510 D KEGG: bja:bll5380 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; preprotein translocase subunit SecY 2362179..2363510 Rhodopseudomonas palustris DX-1 10064418 YP_004108530.1 CDS Rpdx1_2204 NC_014834.1 2363507 2364646 D KEGG: oca:OCAR_5698 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase 2363507..2364646 Rhodopseudomonas palustris DX-1 10064419 YP_004108531.1 CDS Rpdx1_2205 NC_014834.1 2364831 2365199 D KEGG: oca:OCAR_5699 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; 30S ribosomal protein S13 2364831..2365199 Rhodopseudomonas palustris DX-1 10064420 YP_004108532.1 CDS Rpdx1_2206 NC_014834.1 2365329 2365718 D KEGG: bbt:BBta_5047 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; 30S ribosomal protein S11 2365329..2365718 Rhodopseudomonas palustris DX-1 10064421 YP_004108533.1 CDS Rpdx1_2207 NC_014834.1 2365851 2366870 D TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: bbt:BBta_5046 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 2365851..2366870 Rhodopseudomonas palustris DX-1 10064422 YP_004108534.1 CDS Rpdx1_2208 NC_014834.1 2367027 2367446 D KEGG: bbt:BBta_5045 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; 50S ribosomal protein L17 2367027..2367446 Rhodopseudomonas palustris DX-1 10064423 YP_004108535.1 CDS Rpdx1_2209 NC_014834.1 2367796 2368590 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oca:OCAR_5704 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 2367796..2368590 Rhodopseudomonas palustris DX-1 10064424 YP_004108536.1 CDS Rpdx1_2210 NC_014834.1 2368799 2369815 R KEGG: bja:blr5371 zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; zinc-binding alcohol dehydrogenase family protein complement(2368799..2369815) Rhodopseudomonas palustris DX-1 10064425 YP_004108537.1 CDS Rpdx1_2211 NC_014834.1 2369932 2370321 D PFAM: helix-turn-helix HxlR type; KEGG: bja:bll5370 transcriptional regulatory protein; HxlR family transcriptional regulator 2369932..2370321 Rhodopseudomonas palustris DX-1 10064426 YP_004108538.1 CDS Rpdx1_2212 NC_014834.1 2370404 2371795 D SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bbt:BBta_5038 serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; protease Do 2370404..2371795 Rhodopseudomonas palustris DX-1 10064427 YP_004108539.1 CDS Rpdx1_2214 NC_014834.1 2372021 2373352 D KEGG: bja:bll5367 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; AAA ATPase 2372021..2373352 Rhodopseudomonas palustris DX-1 10064429 YP_004108540.1 CDS Rpdx1_2215 NC_014834.1 2373652 2375622 D TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bbt:BBta_1127 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 2373652..2375622 Rhodopseudomonas palustris DX-1 10064430 YP_004108541.1 CDS Rpdx1_2216 NC_014834.1 2375695 2376114 D PFAM: protein of unknown function UPF0047; KEGG: bra:BRADO6457 hypothetical protein; hypothetical protein 2375695..2376114 Rhodopseudomonas palustris DX-1 10064431 YP_004108542.1 CDS Rpdx1_2217 NC_014834.1 2376220 2377428 D PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr2988 hypothetical protein; extracellular ligand-binding receptor 2376220..2377428 Rhodopseudomonas palustris DX-1 10064432 YP_004108543.1 CDS Rpdx1_2218 NC_014834.1 2377563 2379623 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: mrd:Mrad2831_4432 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver; PAS/PAC sensor hybrid histidine kinase complement(2377563..2379623) Rhodopseudomonas palustris DX-1 10064433 YP_004108544.1 CDS Rpdx1_2219 NC_014834.1 2379829 2380506 R PFAM: nitroreductase; KEGG: pzu:PHZ_c0956 nitroreductase; nitroreductase complement(2379829..2380506) Rhodopseudomonas palustris DX-1 10064434 YP_004108545.1 CDS Rpdx1_2220 NC_014834.1 2380731 2383313 R KEGG: abm:ABSDF3536 hypothetical protein; hypothetical protein complement(2380731..2383313) Rhodopseudomonas palustris DX-1 10064435 YP_004108546.1 CDS Rpdx1_2221 NC_014834.1 2383575 2384942 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bbt:BBta_5034 ribosomal large subunit pseudouridine synthase C; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 2383575..2384942 Rhodopseudomonas palustris DX-1 10064436 YP_004108547.1 CDS Rpdx1_2222 NC_014834.1 2385085 2385474 D KEGG: oca:OCAR_5711 hypothetical protein; hypothetical protein 2385085..2385474 Rhodopseudomonas palustris DX-1 10064437 YP_004108548.1 CDS Rpdx1_2223 NC_014834.1 2385492 2386277 D PFAM: ATP12 ATPase; KEGG: bja:bll5364 hypothetical protein; ATPase 2385492..2386277 Rhodopseudomonas palustris DX-1 10064438 YP_004108549.1 CDS Rpdx1_2224 NC_014834.1 2386347 2388128 D KEGG: bbt:BBta_5030 hypothetical protein; hypothetical protein 2386347..2388128 Rhodopseudomonas palustris DX-1 10064439 YP_004108550.1 CDS Rpdx1_2225 NC_014834.1 2388125 2388400 D PFAM: type III secretion exporter; KEGG: nha:Nham_1578 type III secretion protein; type III secretion exporter 2388125..2388400 Rhodopseudomonas palustris DX-1 10064440 YP_004108551.1 CDS Rpdx1_2226 NC_014834.1 2388402 2388848 R KEGG: bbt:BBta_5025 hypothetical protein; hypothetical protein complement(2388402..2388848) Rhodopseudomonas palustris DX-1 10064441 YP_004108552.1 CDS Rpdx1_2227 NC_014834.1 2389118 2390650 D PFAM: carboxyl transferase; KEGG: bra:BRADO4331 putative propionyl-CoA carboxylase beta chain; carboxyl transferase 2389118..2390650 Rhodopseudomonas palustris DX-1 10064442 YP_004108553.1 CDS Rpdx1_2228 NC_014834.1 2390848 2391705 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: mdi:METDI3166 putative epimerase with NAD(P)-binding Rossmann-fold domain (YeeZ-like); NAD-dependent epimerase/dehydratase 2390848..2391705 Rhodopseudomonas palustris DX-1 10064443 YP_004108554.1 CDS Rpdx1_2229 NC_014834.1 2392135 2393193 D KEGG: nhl:Nhal_2911 putative lipoprotein transmembrane; hypothetical protein 2392135..2393193 Rhodopseudomonas palustris DX-1 10064444 YP_004108555.1 CDS Rpdx1_2230 NC_014834.1 2393584 2394423 D PFAM: formate/nitrite transporter; KEGG: bja:bll2801 formate transporter; formate/nitrite transporter 2393584..2394423 Rhodopseudomonas palustris DX-1 10064445 YP_004108556.1 CDS Rpdx1_2231 NC_014834.1 2394491 2396224 D KEGG: bja:bll2800 bifunctional serine/threonine kinase and phosphatase; PFAM: Serine/threonine-protein kinase-like domain; Stage II sporulation E family protein; SMART: serine/threonine protein kinase; protein phosphatase 2C domain protein; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 2394491..2396224 Rhodopseudomonas palustris DX-1 10064446 YP_004108557.1 CDS Rpdx1_2232 NC_014834.1 2396314 2396862 D KEGG: bid:Bind_2416 hypothetical protein; hypothetical protein 2396314..2396862 Rhodopseudomonas palustris DX-1 10064447 YP_004108558.1 CDS Rpdx1_2233 NC_014834.1 2396967 2397776 D PFAM: protein of unknown function DUF1295; KEGG: blt:Balat_0580 hypothetical protein; hypothetical protein 2396967..2397776 Rhodopseudomonas palustris DX-1 10064448 YP_004108559.1 CDS Rpdx1_2234 NC_014834.1 2397839 2398129 R KEGG: bja:bsr5347 hypothetical protein; hypothetical protein complement(2397839..2398129) Rhodopseudomonas palustris DX-1 10064449 YP_004108560.1 CDS Rpdx1_2235 NC_014834.1 2398354 2398755 R KEGG: bja:blr5341 hypothetical protein; hypothetical protein complement(2398354..2398755) Rhodopseudomonas palustris DX-1 10064450 YP_004108561.1 CDS Rpdx1_2236 NC_014834.1 2399086 2402571 D PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: bja:bll5338 indolepyruvate ferredoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase catalytic subunit 2399086..2402571 Rhodopseudomonas palustris DX-1 10064451 YP_004108562.1 CDS Rpdx1_2237 NC_014834.1 2402824 2403972 D KEGG: bra:BRADO4314 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 2402824..2403972 Rhodopseudomonas palustris DX-1 10064452 YP_004108563.1 CDS Rpdx1_2238 NC_014834.1 2403972 2404364 D PFAM: protein of unknown function DUF35; KEGG: bbt:BBta_5005 hypothetical protein; hypothetical protein 2403972..2404364 Rhodopseudomonas palustris DX-1 10064453 YP_004108564.1 CDS Rpdx1_2239 NC_014834.1 2404513 2405373 D KEGG: bja:bll5333 putative dehydrogenase; PFAM: MaoC domain protein dehydratase; 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase 2404513..2405373 Rhodopseudomonas palustris DX-1 10064454 YP_004108565.1 CDS Rpdx1_2240 NC_014834.1 2405458 2406411 D PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll5331 hypothetical protein; dihydrodipicolinate synthetase 2405458..2406411 Rhodopseudomonas palustris DX-1 10064455 YP_004108566.1 CDS Rpdx1_2241 NC_014834.1 2406416 2407207 D PFAM: NUDIX hydrolase; KEGG: bbt:BBta_5001 hypothetical protein; NUDIX hydrolase 2406416..2407207 Rhodopseudomonas palustris DX-1 10064456 YP_004108567.1 CDS Rpdx1_2242 NC_014834.1 2407361 2409535 D TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; KEGG: bbt:BBta_5502 putative alcohol dehydrogenase; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; PQQ-dependent dehydrogenase 2407361..2409535 Rhodopseudomonas palustris DX-1 10064457 YP_004108568.1 CDS Rpdx1_2243 NC_014834.1 2409719 2412421 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: bja:bll5328 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein; multi-sensor signal transduction histidine kinase 2409719..2412421 Rhodopseudomonas palustris DX-1 10064458 YP_004108569.1 CDS Rpdx1_2244 NC_014834.1 2412454 2412804 R KEGG: nha:Nham_2176 hypothetical protein; hypothetical protein complement(2412454..2412804) Rhodopseudomonas palustris DX-1 10064459 YP_004108570.1 CDS Rpdx1_2245 NC_014834.1 2412998 2415016 R KEGG: bra:BRADO6631 putative methyl-accepting chemotaxis receptor/sensory transducer precursor; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(2412998..2415016) Rhodopseudomonas palustris DX-1 10064460 YP_004108571.1 CDS Rpdx1_2246 NC_014834.1 2415793 2416236 D KEGG: bja:bll5314 hypothetical protein; hypothetical protein 2415793..2416236 Rhodopseudomonas palustris DX-1 10064462 YP_004108572.1 CDS Rpdx1_2247 NC_014834.1 2416468 2417343 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:bll5313 hypothetical protein; hypothetical protein 2416468..2417343 Rhodopseudomonas palustris DX-1 10064463 YP_004108573.1 CDS Rpdx1_2248 NC_014834.1 2417440 2417802 R KEGG: bja:blr5311 histon H1; hypothetical protein complement(2417440..2417802) Rhodopseudomonas palustris DX-1 10064464 YP_004108574.1 CDS Rpdx1_2249 NC_014834.1 2417881 2419332 R PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: bbt:BBta_4932 deoxyribodipyrimidine photo-lyase type I; DNA photolyase FAD-binding protein complement(2417881..2419332) Rhodopseudomonas palustris DX-1 10064465 YP_004108575.1 CDS Rpdx1_2250 NC_014834.1 2419451 2419849 D PFAM: Protein of unknown function DUF2177, membrane; KEGG: bra:BRADO3234 hypothetical protein; hypothetical protein 2419451..2419849 Rhodopseudomonas palustris DX-1 10064466 YP_004108576.1 CDS Rpdx1_2251 NC_014834.1 2420141 2420716 D KEGG: nwi:Nwi_1737 hypothetical protein; hypothetical protein 2420141..2420716 Rhodopseudomonas palustris DX-1 10064467 YP_004108577.1 CDS Rpdx1_2252 NC_014834.1 2421083 2423098 D PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: nha:Nham_2165 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding protein 2421083..2423098 Rhodopseudomonas palustris DX-1 10064468 YP_004108578.1 CDS Rpdx1_2253 NC_014834.1 2423103 2423969 D KEGG: bja:bll5266 putative carboxy-phosphonoenolpyruvate mutase; putative carboxy-phosphonoenolpyruvate mutase 2423103..2423969 Rhodopseudomonas palustris DX-1 10064469 YP_004108579.1 CDS Rpdx1_2254 NC_014834.1 2423966 2424268 D KEGG: bja:bsl5265 putative acylphosphatase; manually curated; PFAM: acylphosphatase; acylphosphatase 2423966..2424268 Rhodopseudomonas palustris DX-1 10064470 YP_004108580.1 CDS Rpdx1_2255 NC_014834.1 2424363 2426981 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; GAF domain protein; KEGG: bja:bll6545 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; PAS/PAC GAF sensor -containing diguanylate cyclase/phosphodiesterase complement(2424363..2426981) Rhodopseudomonas palustris DX-1 10064471 YP_004108581.1 CDS Rpdx1_2256 NC_014834.1 2427253 2427990 R TIGRFAM: lipoate-protein ligase B; KEGG: bja:blr5257 lipoyltransferase; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B complement(2427253..2427990) Rhodopseudomonas palustris DX-1 10064472 YP_004108582.1 CDS Rpdx1_2257 NC_014834.1 2428057 2428299 D KEGG: bja:bsl5256 hypothetical protein; manually curated; PFAM: surface presentation of antigens (SPOA) protein; surface presentation of antigens (SPOA) protein 2428057..2428299 Rhodopseudomonas palustris DX-1 10064473 YP_004108583.1 CDS Rpdx1_2258 NC_014834.1 2428574 2429035 R PFAM: RES domain protein; KEGG: xau:Xaut_5010 RES domain-containing protein; RES domain-containing protein complement(2428574..2429035) Rhodopseudomonas palustris DX-1 10064475 YP_004108584.1 CDS Rpdx1_2259 NC_014834.1 2429035 2429463 R KEGG: nha:Nham_3790 hypothetical protein; hypothetical protein complement(2429035..2429463) Rhodopseudomonas palustris DX-1 10064476 YP_004108585.1 CDS Rpdx1_2260 NC_014834.1 2429551 2430870 R PFAM: polysaccharide deacetylase; KEGG: nha:Nham_2435 polysaccharide deacetylase; polysaccharide deacetylase complement(2429551..2430870) Rhodopseudomonas palustris DX-1 10064477 YP_004108586.1 CDS Rpdx1_2261 NC_014834.1 2431007 2431810 R PFAM: polysaccharide deacetylase; KEGG: nha:Nham_2434 polysaccharide deacetylase; polysaccharide deacetylase complement(2431007..2431810) Rhodopseudomonas palustris DX-1 10064478 YP_004108587.1 CDS Rpdx1_2262 NC_014834.1 2431972 2433393 D KEGG: bra:BRADO4563 putative magnesium transporter MgtE-like (divalent cation transporter Mg2+/Ni2+/Co2+); TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; magnesium transporter 2431972..2433393 Rhodopseudomonas palustris DX-1 10064479 YP_004108588.1 CDS Rpdx1_2263 NC_014834.1 2433621 2434454 D PFAM: aldo/keto reductase; KEGG: bra:BRADO4561 putative aldo/keto reductase; putative 2,5-diketo-D-gluconate reductase B (DkgB-like); aldo/keto reductase 2433621..2434454 Rhodopseudomonas palustris DX-1 10064480 YP_004108589.1 CDS Rpdx1_2264 NC_014834.1 2434531 2435325 D PFAM: protein of unknown function DUF218; KEGG: nha:Nham_2431 hypothetical protein; hypothetical protein 2434531..2435325 Rhodopseudomonas palustris DX-1 10064481 YP_004108590.1 CDS Rpdx1_2265 NC_014834.1 2435334 2435624 R KEGG: oca:OCAR_5754 hypothetical protein; hypothetical protein complement(2435334..2435624) Rhodopseudomonas palustris DX-1 10064482 YP_004108591.1 CDS Rpdx1_2266 NC_014834.1 2435744 2436400 D PFAM: Glutathione S-transferase domain; KEGG: nha:Nham_2428 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 2435744..2436400 Rhodopseudomonas palustris DX-1 10064483 YP_004108592.1 CDS Rpdx1_2267 NC_014834.1 2436610 2436801 D KEGG: nha:Nham_2427 hypothetical protein; hypothetical protein 2436610..2436801 Rhodopseudomonas palustris DX-1 10064484 YP_004108593.1 CDS Rpdx1_2268 NC_014834.1 2437172 2438191 D KEGG: nha:Nham_2426 hypothetical protein; hypothetical protein 2437172..2438191 Rhodopseudomonas palustris DX-1 10064485 YP_004108594.1 CDS Rpdx1_2269 NC_014834.1 2438228 2438647 D PFAM: conserved hypothetical protein; KEGG: nha:Nham_2425 hypothetical protein; hypothetical protein 2438228..2438647 Rhodopseudomonas palustris DX-1 10064486 YP_004108595.1 CDS Rpdx1_2270 NC_014834.1 2438687 2439568 R KEGG: bja:blr5162 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase; pantoate/beta-alanine ligase complement(2438687..2439568) Rhodopseudomonas palustris DX-1 10064487 YP_004108596.1 CDS Rpdx1_2271 NC_014834.1 2439791 2440714 D PFAM: ATPase MipZ; KEGG: bja:bll5161 hypothetical protein; ATPase MipZ 2439791..2440714 Rhodopseudomonas palustris DX-1 10064488 YP_004108597.1 CDS Rpdx1_2272 NC_014834.1 2440983 2441810 D KEGG: bra:BRADO4552 putative alpha/beta-hydrolases; putative alpha/beta-hydrolase 2440983..2441810 Rhodopseudomonas palustris DX-1 10064489 YP_004108598.1 CDS Rpdx1_2273 NC_014834.1 2441885 2442619 D KEGG: bja:bll5159 hypothetical protein; hypothetical protein 2441885..2442619 Rhodopseudomonas palustris DX-1 10064490 YP_004108599.1 CDS Rpdx1_2274 NC_014834.1 2442675 2443400 D KEGG: bja:bll5157 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 2442675..2443400 Rhodopseudomonas palustris DX-1 10064491 YP_004108600.1 CDS Rpdx1_2275 NC_014834.1 2443649 2445379 R KEGG: nha:Nham_2420 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; serine-type D-Ala-D-Ala carboxypeptidase complement(2443649..2445379) Rhodopseudomonas palustris DX-1 10064492 YP_004108601.1 CDS Rpdx1_2276 NC_014834.1 2445764 2447215 R KEGG: nha:Nham_2418 hypothetical protein; hypothetical protein complement(2445764..2447215) Rhodopseudomonas palustris DX-1 10064493 YP_004108602.1 CDS Rpdx1_2277 NC_014834.1 2447619 2448017 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: bja:bll5154 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2447619..2448017 Rhodopseudomonas palustris DX-1 10064494 YP_004108603.1 CDS Rpdx1_2278 NC_014834.1 2448209 2450596 D TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: bja:bll5153 ClpA-like protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 2448209..2450596 Rhodopseudomonas palustris DX-1 10064495 YP_004108604.1 CDS Rpdx1_2279 NC_014834.1 2450691 2452472 R KEGG: bja:blr2522 hypothetical protein; hypothetical protein complement(2450691..2452472) Rhodopseudomonas palustris DX-1 10064496 YP_004108605.1 CDS Rpdx1_2280 NC_014834.1 2452998 2453927 R KEGG: bbt:BBta_4763 hypothetical protein; hypothetical protein complement(2452998..2453927) Rhodopseudomonas palustris DX-1 10064497 YP_004108606.1 CDS Rpdx1_2281 NC_014834.1 2454176 2455054 D PFAM: Lytic transglycosylase catalytic; Sporulation domain protein; KEGG: bja:bll5139 transglycosylase; lytic transglycosylase 2454176..2455054 Rhodopseudomonas palustris DX-1 10064498 YP_004108607.1 CDS Rpdx1_2282 NC_014834.1 2455149 2455889 D PFAM: AzlC family protein; KEGG: bra:BRADO4535 putative permease; AzlC family protein 2455149..2455889 Rhodopseudomonas palustris DX-1 10064499 YP_004108608.1 CDS Rpdx1_2283 NC_014834.1 2455886 2456230 D PFAM: branched-chain amino acid transport; KEGG: bbt:BBta_4760 hypothetical protein; branched-chain amino acid transport 2455886..2456230 Rhodopseudomonas palustris DX-1 10064500 YP_004108609.1 CDS Rpdx1_2284 NC_014834.1 2456280 2456744 D PFAM: protein of unknown function UPF0066; KEGG: nha:Nham_2452 hypothetical protein; hypothetical protein 2456280..2456744 Rhodopseudomonas palustris DX-1 10064501 YP_004108610.1 CDS Rpdx1_2285 NC_014834.1 2456795 2457877 R KEGG: rca:Rcas_3954 CaCA family Na(+)/Ca(+) antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; CaCA family Na+/Ca+ antiporter complement(2456795..2457877) Rhodopseudomonas palustris DX-1 10064502 YP_004108611.1 CDS Rpdx1_2286 NC_014834.1 2458007 2458435 R PFAM: histidine triad (HIT) protein; KEGG: bja:blr5135 hypothetical protein; histidine triad (HIT) protein complement(2458007..2458435) Rhodopseudomonas palustris DX-1 10064503 YP_004108612.1 CDS Rpdx1_2287 NC_014834.1 2458486 2459724 R PFAM: protein of unknown function DUF482; KEGG: bja:blr5134 hypothetical protein; hypothetical protein complement(2458486..2459724) Rhodopseudomonas palustris DX-1 10064504 YP_004108613.1 CDS Rpdx1_2288 NC_014834.1 2459807 2460559 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bja:blr5133 hypothetical protein; glycerophosphoryl diester phosphodiesterase complement(2459807..2460559) Rhodopseudomonas palustris DX-1 10064505 YP_004108614.1 CDS Rpdx1_2289 NC_014834.1 2460575 2461042 R PFAM: Endoribonuclease L-PSP; KEGG: nwi:Nwi_1427 endoribonuclease L-PSP; endoribonuclease L-PSP complement(2460575..2461042) Rhodopseudomonas palustris DX-1 10064506 YP_004108615.1 CDS Rpdx1_2290 NC_014834.1 2461308 2462174 D PFAM: Domain of unknown function DUF1849; KEGG: nha:Nham_2446 hypothetical protein; hypothetical protein 2461308..2462174 Rhodopseudomonas palustris DX-1 10064507 YP_004108616.1 CDS Rpdx1_2291 NC_014834.1 2462333 2463655 R KEGG: bja:blr5126 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase complement(2462333..2463655) Rhodopseudomonas palustris DX-1 10064508 YP_004108617.1 CDS Rpdx1_2292 NC_014834.1 2463634 2463933 R KEGG: bbt:BBta_4748 hypothetical protein; hypothetical protein complement(2463634..2463933) Rhodopseudomonas palustris DX-1 10064509 YP_004108618.1 CDS Rpdx1_2293 NC_014834.1 2464059 2464424 D KEGG: bja:bll5124 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 2464059..2464424 Rhodopseudomonas palustris DX-1 10064510 YP_004108619.1 CDS Rpdx1_2294 NC_014834.1 2464435 2465808 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: nha:Nham_2442 response regulator PleD; SMART: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase 2464435..2465808 Rhodopseudomonas palustris DX-1 10064511 YP_004108620.1 CDS Rpdx1_2295 NC_014834.1 2465833 2466117 D KEGG: sit:TM1040_0816 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2136; hypothetical protein 2465833..2466117 Rhodopseudomonas palustris DX-1 10064512 YP_004108621.1 CDS Rpdx1_2296 NC_014834.1 2466128 2466511 D KEGG: mno:Mnod_7326 putative transcription regulator with HTH domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 2466128..2466511 Rhodopseudomonas palustris DX-1 10064513 YP_004108622.1 CDS Rpdx1_2297 NC_014834.1 2466777 2466944 R KEGG: nha:Nham_2441 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; 50S ribosomal protein L33 complement(2466777..2466944) Rhodopseudomonas palustris DX-1 10064514 YP_004108623.1 CDS Rpdx1_2298 NC_014834.1 2467242 2468492 D PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A3477 major facilitator transporter; major facilitator superfamily protein 2467242..2468492 Rhodopseudomonas palustris DX-1 10064515 YP_004108624.1 CDS Rpdx1_2299 NC_014834.1 2468526 2469281 R PFAM: NUDIX hydrolase; KEGG: bra:BRADO4511 putative NUDIX hydrolase; NUDIX hydrolase complement(2468526..2469281) Rhodopseudomonas palustris DX-1 10064516 YP_004108625.1 CDS Rpdx1_2300 NC_014834.1 2469351 2469779 R PFAM: protein of unknown function DUF983; KEGG: bbt:BBta_4735 hypothetical protein; hypothetical protein complement(2469351..2469779) Rhodopseudomonas palustris DX-1 10064517 YP_004108626.1 CDS Rpdx1_2301 NC_014834.1 2469779 2472124 R TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: nha:Nham_2438 ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease R complement(2469779..2472124) Rhodopseudomonas palustris DX-1 10064518 YP_004108627.1 CDS Rpdx1_2302 NC_014834.1 2472127 2474859 R SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: nha:Nham_2437 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I complement(2472127..2474859) Rhodopseudomonas palustris DX-1 10064519 YP_004108628.1 CDS Rpdx1_2303 NC_014834.1 2475105 2475320 D KEGG: nwi:Nwi_1711 hypothetical protein; hypothetical protein 2475105..2475320 Rhodopseudomonas palustris DX-1 10064520 YP_004108629.1 CDS Rpdx1_2304 NC_014834.1 2475577 2476713 R KEGG: nha:Nham_2285 DNA processing protein DprA, putative; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA complement(2475577..2476713) Rhodopseudomonas palustris DX-1 10064521 YP_004108630.1 CDS Rpdx1_2305 NC_014834.1 2476843 2477451 R PFAM: protein of unknown function DUF205; KEGG: bja:blr5101 putative glycerol-3-phosphate acyltransferase PlsY; hypothetical protein complement(2476843..2477451) Rhodopseudomonas palustris DX-1 10064522 YP_004108631.1 CDS Rpdx1_2306 NC_014834.1 2477629 2478930 R KEGG: bja:blr5100 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; multifunctional complex dihydroorotase complement(2477629..2478930) Rhodopseudomonas palustris DX-1 10064523 YP_004108632.1 CDS Rpdx1_2307 NC_014834.1 2478950 2479903 R TIGRFAM: aspartate carbamoyltransferase; KEGG: bbt:BBta_4725 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate carbamoyltransferase complement(2478950..2479903) Rhodopseudomonas palustris DX-1 10064524 YP_004108633.1 CDS Rpdx1_2308 NC_014834.1 2480096 2481727 D KEGG: bbt:BBta_0512 indole-3-pyruvate decarboxylase; TIGRFAM: indolepyruvate/phenylpyruvate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; indolepyruvate/phenylpyruvate decarboxylase 2480096..2481727 Rhodopseudomonas palustris DX-1 10064525 YP_004108634.1 CDS Rpdx1_2309 NC_014834.1 2481807 2483456 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll5097 acyl CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2481807..2483456 Rhodopseudomonas palustris DX-1 10064526 YP_004108635.1 CDS Rpdx1_2310 NC_014834.1 2483578 2483964 R KEGG: gem:GM21_0959 sec-C motif domain protein; sec-C motif domain-containing protein complement(2483578..2483964) Rhodopseudomonas palustris DX-1 10064527 YP_004108636.1 CDS Rpdx1_2311 NC_014834.1 2483985 2484467 R KEGG: nha:Nham_2279 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; Holliday junction resolvase YqgF complement(2483985..2484467) Rhodopseudomonas palustris DX-1 10064528 YP_004108637.1 CDS Rpdx1_2312 NC_014834.1 2484553 2485488 R PFAM: cyclase family protein; KEGG: bra:BRADO4495 putative cyclase; cyclase family protein complement(2484553..2485488) Rhodopseudomonas palustris DX-1 10064529 YP_004108638.1 CDS Rpdx1_2313 NC_014834.1 2485804 2486880 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: nha:Nham_2278 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 2485804..2486880 Rhodopseudomonas palustris DX-1 10064530 YP_004108639.1 CDS Rpdx1_2314 NC_014834.1 2486968 2487255 D KEGG: oca:OCAR_5794 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 2486968..2487255 Rhodopseudomonas palustris DX-1 10064531 YP_004108640.1 CDS Rpdx1_2315 NC_014834.1 2487267 2487473 D KEGG: nha:Nham_2276 hypothetical protein; hypothetical protein 2487267..2487473 Rhodopseudomonas palustris DX-1 10064532 YP_004108641.1 CDS Rpdx1_2316 NC_014834.1 2487477 2487764 R KEGG: oca:OCAR_6294 hypothetical protein; hypothetical protein complement(2487477..2487764) Rhodopseudomonas palustris DX-1 10064533 YP_004108642.1 CDS Rpdx1_2318 NC_014834.1 2488180 2489658 D KEGG: nha:Nham_2275 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 2488180..2489658 Rhodopseudomonas palustris DX-1 10064535 YP_004108643.1 CDS Rpdx1_2319 NC_014834.1 2489736 2490842 D KEGG: mlo:mlr9681 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; signal transduction histidine kinase 2489736..2490842 Rhodopseudomonas palustris DX-1 10064536 YP_004108644.1 CDS Rpdx1_2320 NC_014834.1 2490984 2492366 D PFAM: Patatin; KEGG: nha:Nham_2273 patatin; patatin 2490984..2492366 Rhodopseudomonas palustris DX-1 10064537 YP_004108645.1 CDS Rpdx1_2321 NC_014834.1 2492459 2493943 D KEGG: nwi:Nwi_1997 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; glutamyl-tRNA(Gln) amidotransferase subunit B 2492459..2493943 Rhodopseudomonas palustris DX-1 10064538 YP_004108646.1 CDS Rpdx1_2322 NC_014834.1 2494467 2494604 D KEGG: lbz:LbrM27_V2.1290 histone H1; histone H1 2494467..2494604 Rhodopseudomonas palustris DX-1 10064539 YP_004108647.1 CDS Rpdx1_2323 NC_014834.1 2495293 2495559 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: bbt:BBta_4706 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 2495293..2495559 Rhodopseudomonas palustris DX-1 10064540 YP_004108648.1 CDS Rpdx1_2324 NC_014834.1 2495605 2496603 R PFAM: conserved hypothetical protein; KEGG: reu:Reut_A0309 twin-arginine translocation pathway signal; hypothetical protein complement(2495605..2496603) Rhodopseudomonas palustris DX-1 10064541 YP_004108649.1 CDS Rpdx1_2325 NC_014834.1 2496745 2497329 D KEGG: oca:OCAR_6389 NnrU protein; NnrU protein 2496745..2497329 Rhodopseudomonas palustris DX-1 10064542 YP_004108650.1 CDS Rpdx1_2326 NC_014834.1 2497336 2498160 D TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: nha:Nham_1683 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2497336..2498160 Rhodopseudomonas palustris DX-1 10064543 YP_004108651.1 CDS Rpdx1_2327 NC_014834.1 2498325 2498981 D PFAM: Protein of unknown function DUF2133; KEGG: bja:blr4050 hypothetical protein; hypothetical protein 2498325..2498981 Rhodopseudomonas palustris DX-1 10064544 YP_004108652.1 CDS Rpdx1_2328 NC_014834.1 2499027 2499548 D KEGG: bbt:BBta_3775 hypothetical protein; hypothetical protein 2499027..2499548 Rhodopseudomonas palustris DX-1 10064545 YP_004108653.1 CDS Rpdx1_2329 NC_014834.1 2499622 2500998 D KEGG: bja:blr4052 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; ribosome-associated GTPase EngA 2499622..2500998 Rhodopseudomonas palustris DX-1 10064546 YP_004108654.1 CDS Rpdx1_2330 NC_014834.1 2500995 2502260 D PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr4054 tetracycline resistance protein; major facilitator superfamily protein 2500995..2502260 Rhodopseudomonas palustris DX-1 10064547 YP_004108655.1 CDS Rpdx1_2331 NC_014834.1 2502407 2507317 R TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: cell surface receptor IPT/TIG domain protein; KEGG: bra:BRADO3823 hypothetical protein; SMART: cell surface receptor IPT/TIG domain protein; outer membrane autotransporter barrel domain-containing protein complement(2502407..2507317) Rhodopseudomonas palustris DX-1 10064548 YP_004108656.1 CDS Rpdx1_2332 NC_014834.1 2507971 2508606 D PFAM: Tail Collar domain protein; KEGG: ote:Oter_4253 tail collar domain-containing protein; Tail Collar domain-containing protein 2507971..2508606 Rhodopseudomonas palustris DX-1 10064549 YP_004108657.1 CDS Rpdx1_2333 NC_014834.1 2508676 2508963 R KEGG: rce:RC1_3289 hypothetical protein; hypothetical protein complement(2508676..2508963) Rhodopseudomonas palustris DX-1 10064550 YP_004108658.1 CDS Rpdx1_2334 NC_014834.1 2509087 2509659 D PFAM: GCN5-related N-acetyltransferase; KEGG: cja:CJA_0596 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2509087..2509659 Rhodopseudomonas palustris DX-1 10064551 YP_004108659.1 CDS Rpdx1_2335 NC_014834.1 2509745 2510971 R KEGG: bbt:BBta_3779 putative ABC transporter, substrate binding protein; putative ABC transporter substrate-binding protein complement(2509745..2510971) Rhodopseudomonas palustris DX-1 10064552 YP_004108660.1 CDS Rpdx1_2336 NC_014834.1 2511055 2511798 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nwi:Nwi_2019 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2511055..2511798) Rhodopseudomonas palustris DX-1 10064553 YP_004108661.1 CDS Rpdx1_2337 NC_014834.1 2511948 2513477 R KEGG: oca:OCAR_6382 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; amidophosphoribosyltransferase complement(2511948..2513477) Rhodopseudomonas palustris DX-1 10064554 YP_004108662.1 CDS Rpdx1_2338 NC_014834.1 2513501 2514136 R PFAM: Colicin V production protein; KEGG: bja:bll4061 colicin V production protein; colicin V production protein complement(2513501..2514136) Rhodopseudomonas palustris DX-1 10064555 YP_004108663.1 CDS Rpdx1_2339 NC_014834.1 2514350 2515807 R KEGG: bja:bll4062 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; DNA repair protein RadA complement(2514350..2515807) Rhodopseudomonas palustris DX-1 10064556 YP_004108664.1 CDS Rpdx1_2340 NC_014834.1 2515958 2516350 D KEGG: xau:Xaut_1872 hypothetical protein; hypothetical protein 2515958..2516350 Rhodopseudomonas palustris DX-1 10064557 YP_004108665.1 CDS Rpdx1_2341 NC_014834.1 2516456 2516710 D KEGG: bra:BRADO5343 hypothetical protein; hypothetical protein 2516456..2516710 Rhodopseudomonas palustris DX-1 10064558 YP_004108666.1 CDS Rpdx1_2342 NC_014834.1 2516833 2518080 R TIGRFAM: alanine racemase; KEGG: nha:Nham_2290 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(2516833..2518080) Rhodopseudomonas palustris DX-1 10064559 YP_004108667.1 CDS Rpdx1_2343 NC_014834.1 2518148 2519644 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: nha:Nham_2289 replicative DNA helicase; SMART: AAA ATPase; replicative DNA helicase complement(2518148..2519644) Rhodopseudomonas palustris DX-1 10064560 YP_004108668.1 CDS Rpdx1_2344 NC_014834.1 2520268 2521521 R KEGG: nha:Nham_2287 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(2520268..2521521) Rhodopseudomonas palustris DX-1 10064561 YP_004108669.1 CDS Rpdx1_2345 NC_014834.1 2521790 2522749 D KEGG: bja:blr4073 hypothetical protein; hypothetical protein 2521790..2522749 Rhodopseudomonas palustris DX-1 10064562 YP_004108670.1 CDS Rpdx1_2346 NC_014834.1 2523426 2524016 D PFAM: regulatory protein TetR; KEGG: bja:blr4074 transcriptional regulatory protein; regulatory protein TetR 2523426..2524016 Rhodopseudomonas palustris DX-1 10064563 YP_004108671.1 CDS Rpdx1_2347 NC_014834.1 2524021 2524485 D PFAM: thioesterase superfamily protein; KEGG: bja:blr4075 hypothetical protein; thioesterase superfamily protein 2524021..2524485 Rhodopseudomonas palustris DX-1 10064564 YP_004108672.1 CDS Rpdx1_2348 NC_014834.1 2524529 2525116 R KEGG: bja:bll4076 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; 50S ribosomal protein L9 complement(2524529..2525116) Rhodopseudomonas palustris DX-1 10064565 YP_004108673.1 CDS Rpdx1_2349 NC_014834.1 2525153 2526103 R KEGG: nha:Nham_2414 hypothetical protein; hypothetical protein complement(2525153..2526103) Rhodopseudomonas palustris DX-1 10064566 YP_004108674.1 CDS Rpdx1_2350 NC_014834.1 2526228 2526467 R KEGG: nwi:Nwi_1692 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; 30S ribosomal protein S18 complement(2526228..2526467) Rhodopseudomonas palustris DX-1 10064567 YP_004108675.1 CDS Rpdx1_2351 NC_014834.1 2526473 2526949 R KEGG: nha:Nham_2355 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 complement(2526473..2526949) Rhodopseudomonas palustris DX-1 10064568 YP_004108676.1 CDS Rpdx1_2352 NC_014834.1 2527663 2528622 D KEGG: bja:blr4082 acyl-carrier-protein S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-acyl carrier protein transacylase 2527663..2528622 Rhodopseudomonas palustris DX-1 10064569 YP_004108677.1 CDS Rpdx1_2353 NC_014834.1 2528642 2529379 D KEGG: nha:Nham_2353 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-(acyl-carrier-protein) reductase 2528642..2529379 Rhodopseudomonas palustris DX-1 10064570 YP_004108678.1 CDS Rpdx1_2354 NC_014834.1 2529684 2529923 D KEGG: nwi:Nwi_1687 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; acyl carrier protein 2529684..2529923 Rhodopseudomonas palustris DX-1 10064571 YP_004108679.1 CDS Rpdx1_2355 NC_014834.1 2530020 2531285 D KEGG: bbt:BBta_3820 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 2530020..2531285 Rhodopseudomonas palustris DX-1 10064572 YP_004108680.1 CDS Rpdx1_2356 NC_014834.1 2531489 2532742 D PFAM: aminodeoxychorismate lyase; KEGG: nha:Nham_2350 aminodeoxychorismate lyase; aminodeoxychorismate lyase 2531489..2532742 Rhodopseudomonas palustris DX-1 10064573 YP_004108681.1 CDS Rpdx1_2357 NC_014834.1 2532845 2533732 D PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: bja:blr4087 hypothetical protein; YicC domain-containing protein 2532845..2533732 Rhodopseudomonas palustris DX-1 10064574 YP_004108682.1 CDS Rpdx1_2358 NC_014834.1 2533735 2534397 D SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: bra:BRADO3317 guanylate kinase; PFAM: guanylate kinase; guanylate kinase 2533735..2534397 Rhodopseudomonas palustris DX-1 10064575 YP_004108683.1 CDS Rpdx1_2359 NC_014834.1 2534402 2535598 R KEGG: nha:Nham_2347 hypothetical protein; hypothetical protein complement(2534402..2535598) Rhodopseudomonas palustris DX-1 10064576 YP_004108684.1 CDS Rpdx1_2360 NC_014834.1 2535767 2536825 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bja:bll4101 putative NAD-dependent alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein complement(2535767..2536825) Rhodopseudomonas palustris DX-1 10064577 YP_004108685.1 CDS Rpdx1_2361 NC_014834.1 2536842 2537705 R TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: bja:bll4102 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like; dimethyladenosine transferase complement(2536842..2537705) Rhodopseudomonas palustris DX-1 10064578 YP_004108686.1 CDS Rpdx1_2362 NC_014834.1 2537702 2538715 R TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bja:bll4103 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase complement(2537702..2538715) Rhodopseudomonas palustris DX-1 10064579 YP_004108687.1 CDS Rpdx1_2363 NC_014834.1 2538777 2539703 R PFAM: SurA domain; KEGG: nha:Nham_2343 hypothetical protein; SurA domain complement(2538777..2539703) Rhodopseudomonas palustris DX-1 10064580 YP_004108688.1 CDS Rpdx1_2364 NC_014834.1 2539778 2542297 R PFAM: Organic solvent tolerance protein; KEGG: nha:Nham_2342 organic solvent tolerance protein; organic solvent tolerance protein complement(2539778..2542297) Rhodopseudomonas palustris DX-1 10064581 YP_004108689.1 CDS Rpdx1_2365 NC_014834.1 2542297 2543382 R PFAM: permease YjgP/YjgQ family protein; KEGG: nha:Nham_2341 permease YjgP/YjgQ; YjgP/YjgQ family permease complement(2542297..2543382) Rhodopseudomonas palustris DX-1 10064582 YP_004108690.1 CDS Rpdx1_2366 NC_014834.1 2543396 2544562 R PFAM: permease YjgP/YjgQ family protein; KEGG: nha:Nham_2340 permease YjgP/YjgQ; YjgP/YjgQ family permease complement(2543396..2544562) Rhodopseudomonas palustris DX-1 10064583 YP_004108691.1 CDS Rpdx1_2367 NC_014834.1 2544963 2546465 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: nha:Nham_2339 leucyl aminopeptidase; peptidase M17 leucyl aminopeptidase domain-containing protein 2544963..2546465 Rhodopseudomonas palustris DX-1 10064584 YP_004108692.1 CDS Rpdx1_2368 NC_014834.1 2546475 2546927 D PFAM: DNA polymerase III chi subunit HolC; KEGG: bja:blr4109 DNA polymerase III subunit chi; DNA polymerase III subunit chi HolC 2546475..2546927 Rhodopseudomonas palustris DX-1 10064585 YP_004108693.1 CDS Rpdx1_2369 NC_014834.1 2546939 2547577 D KEGG: oca:OCAR_6350 putative lipoprotein; hypothetical protein 2546939..2547577 Rhodopseudomonas palustris DX-1 10064586 YP_004108694.1 CDS Rpdx1_2370 NC_014834.1 2547800 2549677 R KEGG: bra:BRADO3331 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(2547800..2549677) Rhodopseudomonas palustris DX-1 10064587 YP_004108695.1 CDS Rpdx1_2371 NC_014834.1 2549823 2550245 D PFAM: nucleoside diphosphate kinase; KEGG: bbt:BBta_3838 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase 2549823..2550245 Rhodopseudomonas palustris DX-1 10064588 YP_004108696.1 CDS Rpdx1_2372 NC_014834.1 2550320 2551141 D PFAM: Integral membrane protein TerC; KEGG: bja:blr4120 hypothetical protein; integral membrane protein TerC 2550320..2551141 Rhodopseudomonas palustris DX-1 10064589 YP_004108697.1 CDS Rpdx1_2373 NC_014834.1 2551222 2551995 R manually curated; KEGG: bja:blr1556 hypothetical protein; putative Crp/Fnr family transcriptional regulator complement(2551222..2551995) Rhodopseudomonas palustris DX-1 10064590 YP_004108698.1 CDS Rpdx1_2374 NC_014834.1 2552477 2552680 D KEGG: nwi:Nwi_1599 cold-shock protein, DNA-binding; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 2552477..2552680 Rhodopseudomonas palustris DX-1 10064591 YP_004108699.1 CDS Rpdx1_2375 NC_014834.1 2552744 2553397 R KEGG: bra:BRADO3345 phosphoribosylglycinamide formyltransferase (GarT) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase); TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase complement(2552744..2553397) Rhodopseudomonas palustris DX-1 10064592 YP_004108700.1 CDS Rpdx1_2376 NC_014834.1 2553406 2554479 R TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: bbt:BBta_3852 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase complement(2553406..2554479) Rhodopseudomonas palustris DX-1 10064593 YP_004108701.1 CDS Rpdx1_2377 NC_014834.1 2554743 2555288 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: nha:Nham_2117 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2554743..2555288 Rhodopseudomonas palustris DX-1 10064594 YP_004108702.1 CDS Rpdx1_2378 NC_014834.1 2555332 2556009 D KEGG: bja:bll4123 hypothetical protein; hypothetical protein 2555332..2556009 Rhodopseudomonas palustris DX-1 10064595 YP_004108703.1 CDS Rpdx1_2379 NC_014834.1 2556157 2558367 D TIGRFAM: Polyphosphate kinase; KEGG: nwi:Nwi_1594 polyphosphate kinase; PFAM: Polyphosphate kinase; polyphosphate kinase 2556157..2558367 Rhodopseudomonas palustris DX-1 10064596 YP_004108704.1 CDS Rpdx1_2380 NC_014834.1 2558380 2559885 D PFAM: Ppx/GppA phosphatase; KEGG: bja:bll4121 hypothetical protein; Ppx/GppA phosphatase 2558380..2559885 Rhodopseudomonas palustris DX-1 10064597 YP_004108705.1 CDS Rpdx1_2381 NC_014834.1 2560124 2561047 R KEGG: ara:Arad_4066 hypothetical protein; hypothetical protein complement(2560124..2561047) Rhodopseudomonas palustris DX-1 10064598 YP_004108706.1 CDS Rpdx1_2382 NC_014834.1 2561059 2562222 R SMART: 3'-5' exonuclease; TIGRFAM: ribonuclease D; KEGG: bbt:BBta_3861 ribonuclease D (RNase D); PFAM: 3'-5' exonuclease; HRDC domain protein; ribonuclease D complement(2561059..2562222) Rhodopseudomonas palustris DX-1 10064599 YP_004108707.1 CDS Rpdx1_2383 NC_014834.1 2562325 2563803 R PFAM: protein of unknown function UPF0061; KEGG: bra:BRADO3358 hypothetical protein; hypothetical protein complement(2562325..2563803) Rhodopseudomonas palustris DX-1 10064600 YP_004108708.1 CDS Rpdx1_2384 NC_014834.1 2564062 2565837 D KEGG: nwi:Nwi_1588 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; aspartyl-tRNA synthetase 2564062..2565837 Rhodopseudomonas palustris DX-1 10064601 YP_004108709.1 CDS Rpdx1_2385 NC_014834.1 2565884 2568193 D PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: bbt:BBta_3876 malic enzyme; malic protein NAD-binding protein 2565884..2568193 Rhodopseudomonas palustris DX-1 10064602 YP_004108710.1 CDS Rpdx1_2386 NC_014834.1 2568306 2568743 D PFAM: DoxX family protein; KEGG: nha:Nham_2109 DoxX; DoxX family protein 2568306..2568743 Rhodopseudomonas palustris DX-1 10064603 YP_004108711.1 CDS Rpdx1_2387 NC_014834.1 2568750 2569313 R KEGG: nha:Nham_2108 hypothetical protein; hypothetical protein complement(2568750..2569313) Rhodopseudomonas palustris DX-1 10064604 YP_004108712.1 CDS Rpdx1_2388 NC_014834.1 2569351 2570310 R PFAM: polysaccharide deacetylase; KEGG: nha:Nham_2107 polysaccharide deacetylase; polysaccharide deacetylase complement(2569351..2570310) Rhodopseudomonas palustris DX-1 10064605 YP_004108713.1 CDS Rpdx1_2389 NC_014834.1 2570467 2571975 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_2106 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(2570467..2571975) Rhodopseudomonas palustris DX-1 10064606 YP_004108714.1 CDS Rpdx1_2390 NC_014834.1 2572186 2572731 D PFAM: CreA family protein; KEGG: bja:blr4151 hypothetical protein; CreA family protein 2572186..2572731 Rhodopseudomonas palustris DX-1 10064607 YP_004108715.1 CDS Rpdx1_2391 NC_014834.1 2572841 2573095 R hypothetical protein complement(2572841..2573095) Rhodopseudomonas palustris DX-1 10064608 YP_004108716.1 CDS Rpdx1_2392 NC_014834.1 2573896 2574267 D KEGG: bur:Bcep18194_B2513 glucose-methanol-choline oxidoreductase; hypothetical protein 2573896..2574267 Rhodopseudomonas palustris DX-1 10064609 YP_004108717.1 CDS Rpdx1_2393 NC_014834.1 2574295 2574555 R KEGG: nwi:Nwi_1582 hypothetical protein; hypothetical protein complement(2574295..2574555) Rhodopseudomonas palustris DX-1 10064610 YP_004108718.1 CDS Rpdx1_2394 NC_014834.1 2574689 2575969 D KEGG: bja:blr4156 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase 2574689..2575969 Rhodopseudomonas palustris DX-1 10064611 YP_004108719.1 CDS Rpdx1_2395 NC_014834.1 2576109 2576507 D PFAM: thioesterase superfamily protein; KEGG: bja:blr4161 hypothetical protein; thioesterase superfamily protein 2576109..2576507 Rhodopseudomonas palustris DX-1 10064612 YP_004108720.1 CDS Rpdx1_2396 NC_014834.1 2576762 2577385 D PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_3891 GNAT family acetyltransferase; N-acetyltransferase GCN5 2576762..2577385 Rhodopseudomonas palustris DX-1 10064613 YP_004108721.1 CDS Rpdx1_2397 NC_014834.1 2577466 2577780 R KEGG: nwi:Nwi_1581 hypothetical protein; hypothetical protein complement(2577466..2577780) Rhodopseudomonas palustris DX-1 10064614 YP_004108722.1 CDS Rpdx1_2398 NC_014834.1 2577969 2578142 R PFAM: protein of unknown function DUF1328; KEGG: bja:bsl5717 hypothetical protein; hypothetical protein complement(2577969..2578142) Rhodopseudomonas palustris DX-1 10064615 YP_004108723.1 CDS Rpdx1_2399 NC_014834.1 2578450 2579286 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: bja:blr4172 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 2578450..2579286 Rhodopseudomonas palustris DX-1 10064616 YP_004108724.1 CDS Rpdx1_2400 NC_014834.1 2579538 2581400 D PFAM: K potassium transporter; KEGG: dar:Daro_1184 K+ potassium transporter; potassium transporter 2579538..2581400 Rhodopseudomonas palustris DX-1 10064617 YP_004108725.1 CDS Rpdx1_2401 NC_014834.1 2581410 2582051 R PFAM: Abortive infection protein; KEGG: paa:Paes_1404 abortive infection protein; abortive infection protein complement(2581410..2582051) Rhodopseudomonas palustris DX-1 10064618 YP_004108726.1 CDS Rpdx1_2402 NC_014834.1 2582106 2582342 R KEGG: bja:bsr4396 hypothetical protein; hypothetical protein complement(2582106..2582342) Rhodopseudomonas palustris DX-1 10064619 YP_004108727.1 CDS Rpdx1_2403 NC_014834.1 2582566 2582982 D KEGG: bja:bll5535 hypothetical protein; hypothetical protein 2582566..2582982 Rhodopseudomonas palustris DX-1 10064620 YP_004108728.1 CDS Rpdx1_2404 NC_014834.1 2583157 2584326 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bbt:BBta_6701 putative diguanylate cyclase (GGDEF); SMART: GGDEF domain containing protein; diguanylate cyclase complement(2583157..2584326) Rhodopseudomonas palustris DX-1 10064621 YP_004108729.1 CDS Rpdx1_2405 NC_014834.1 2584445 2585032 R PFAM: regulatory protein TetR; KEGG: afw:Anae109_3254 TetR family transcriptional regulator; regulatory protein TetR complement(2584445..2585032) Rhodopseudomonas palustris DX-1 10064622 YP_004108730.1 CDS Rpdx1_2406 NC_014834.1 2585235 2586434 D KEGG: vap:Vapar_2562 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 2585235..2586434 Rhodopseudomonas palustris DX-1 10064623 YP_004108731.1 CDS Rpdx1_2407 NC_014834.1 2586564 2589797 D KEGG: mrd:Mrad2831_3044 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 2586564..2589797 Rhodopseudomonas palustris DX-1 10064624 YP_004108732.1 CDS Rpdx1_2408 NC_014834.1 2589832 2591064 R PFAM: glutamate--cysteine ligase GCS2; KEGG: bra:BRADO0861 carboxylate-amine ligase; glutamate--cysteine ligase complement(2589832..2591064) Rhodopseudomonas palustris DX-1 10064625 YP_004108733.1 CDS Rpdx1_2409 NC_014834.1 2591054 2592793 R KEGG: bra:BRADO0860 asparagine synthetase; TIGRFAM: asparagine synthase family amidotransferase; asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; asparagine synthase family amidotransferase complement(2591054..2592793) Rhodopseudomonas palustris DX-1 10064626 YP_004108734.1 CDS Rpdx1_2410 NC_014834.1 2592850 2593668 R KEGG: bra:BRADO0859 putative glutamine amidotransferase, class-II; putative glutamine amidotransferase, class-II complement(2592850..2593668) Rhodopseudomonas palustris DX-1 10064627 YP_004108735.1 CDS Rpdx1_2411 NC_014834.1 2593881 2594720 D PFAM: UspA domain protein; KEGG: rmr:Rmar_0032 UspA domain protein; UspA domain-containing protein 2593881..2594720 Rhodopseudomonas palustris DX-1 10064628 YP_004108736.1 CDS Rpdx1_2412 NC_014834.1 2594980 2597856 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; Na+/H+ antiporter MnhB subunit-related protein; KEGG: jan:Jann_3715 putative monovalent cation/H+ antiporter subunit A; NADH/ubiquinone/plastoquinone 2594980..2597856 Rhodopseudomonas palustris DX-1 10064629 YP_004108737.1 CDS Rpdx1_2413 NC_014834.1 2597858 2598226 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: tmz:Tmz1t_1101 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 2597858..2598226 Rhodopseudomonas palustris DX-1 10064630 YP_004108738.1 CDS Rpdx1_2414 NC_014834.1 2598223 2599764 D KEGG: tmz:Tmz1t_1102 NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) 2598223..2599764 Rhodopseudomonas palustris DX-1 10064631 YP_004108739.1 CDS Rpdx1_2415 NC_014834.1 2599761 2600249 D PFAM: cation antiporter; KEGG: jan:Jann_3718 putative monovalent cation/H+ antiporter subunit E; cation antiporter 2599761..2600249 Rhodopseudomonas palustris DX-1 10064632 YP_004108740.1 CDS Rpdx1_2416 NC_014834.1 2600246 2600515 D PFAM: multiple resistance and pH regulation protein F; KEGG: dsh:Dshi_3809 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 2600246..2600515 Rhodopseudomonas palustris DX-1 10064633 YP_004108741.1 CDS Rpdx1_2417 NC_014834.1 2600522 2600947 D KEGG: pde:Pden_0702 monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 2600522..2600947 Rhodopseudomonas palustris DX-1 10064634 YP_004108742.1 CDS Rpdx1_2418 NC_014834.1 2601140 2602348 R KEGG: swo:Swol_0406 hypothetical protein; hypothetical protein complement(2601140..2602348) Rhodopseudomonas palustris DX-1 10064635 YP_004108743.1 CDS Rpdx1_2419 NC_014834.1 2602358 2603683 R KEGG: swo:Swol_0407 nitrogenase molybdenum-iron protein alpha and beta chains-like protein; nitrogenase molybdenum-iron protein alpha and beta chains-like protein complement(2602358..2603683) Rhodopseudomonas palustris DX-1 10064636 YP_004108744.1 CDS Rpdx1_2420 NC_014834.1 2603680 2604471 R KEGG: dsy:DSY3569 nitrogenase subunit NifH; PFAM: NifH/frxC-family protein; nitrogenase complement(2603680..2604471) Rhodopseudomonas palustris DX-1 10064637 YP_004108745.1 CDS Rpdx1_2421 NC_014834.1 2604555 2606846 R PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cff:CFF8240_1206 putative TonB-dependent receptor; TonB-dependent receptor plug complement(2604555..2606846) Rhodopseudomonas palustris DX-1 10064638 YP_004108746.1 CDS Rpdx1_2422 NC_014834.1 2607228 2608319 D PFAM: periplasmic binding protein; KEGG: rle:RL2022 putative solute-binding component of cationic transporter; periplasmic-binding protein 2607228..2608319 Rhodopseudomonas palustris DX-1 10064639 YP_004108747.1 CDS Rpdx1_2423 NC_014834.1 2608316 2609407 D PFAM: transport system permease protein; KEGG: pde:Pden_1169 transport system permease protein; transporter permease 2608316..2609407 Rhodopseudomonas palustris DX-1 10064640 YP_004108748.1 CDS Rpdx1_2424 NC_014834.1 2609404 2610174 D KEGG: pde:Pden_1170 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2609404..2610174 Rhodopseudomonas palustris DX-1 10064641 YP_004108749.1 CDS Rpdx1_2425 NC_014834.1 2610169 2610798 R KEGG: rlg:Rleg_1653 hypothetical protein; hypothetical protein complement(2610169..2610798) Rhodopseudomonas palustris DX-1 10064642 YP_004108750.1 CDS Rpdx1_2426 NC_014834.1 2610795 2611397 R KEGG: rha:RHA1_ro03621 hypothetical protein; hypothetical protein complement(2610795..2611397) Rhodopseudomonas palustris DX-1 10064643 YP_004108751.1 CDS Rpdx1_2427 NC_014834.1 2611414 2611941 R KEGG: rer:RER_36430 hypothetical protein; hypothetical protein complement(2611414..2611941) Rhodopseudomonas palustris DX-1 10064644 YP_004108752.1 CDS Rpdx1_2428 NC_014834.1 2611981 2612103 D hypothetical protein 2611981..2612103 Rhodopseudomonas palustris DX-1 10064645 YP_004108753.1 CDS Rpdx1_2429 NC_014834.1 2612569 2613009 D PFAM: cytochrome c class II; KEGG: bid:Bind_0112 cytochrome c prime; cytochrome c class II 2612569..2613009 Rhodopseudomonas palustris DX-1 10064646 YP_004108754.1 CDS Rpdx1_2430 NC_014834.1 2613013 2613687 D KEGG: bid:Bind_0113 cytochrome b561; cytochrome b561 2613013..2613687 Rhodopseudomonas palustris DX-1 10064647 YP_004108755.1 CDS Rpdx1_2431 NC_014834.1 2613771 2614229 R PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_3627 thioesterase superfamily protein; thioesterase superfamily protein complement(2613771..2614229) Rhodopseudomonas palustris DX-1 10064648 YP_004108756.1 CDS Rpdx1_2432 NC_014834.1 2614378 2614752 R KEGG: pde:Pden_4695 hypothetical protein; hypothetical protein complement(2614378..2614752) Rhodopseudomonas palustris DX-1 10064649 YP_004108757.1 CDS Rpdx1_2433 NC_014834.1 2614764 2616071 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsh:Dshi_2526 putative sulfide quinone-rductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2614764..2616071) Rhodopseudomonas palustris DX-1 10064650 YP_004108758.1 CDS Rpdx1_2434 NC_014834.1 2616672 2618258 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: alv:Alvin_2499 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 2616672..2618258 Rhodopseudomonas palustris DX-1 10064651 YP_004108759.1 CDS Rpdx1_2435 NC_014834.1 2618275 2619426 D KEGG: alv:Alvin_2500 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 2618275..2619426 Rhodopseudomonas palustris DX-1 10064652 YP_004108760.1 CDS Rpdx1_2436 NC_014834.1 2619439 2619591 D KEGG: pha:PSHAa2020 hypothetical protein; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; cyd operon protein YbgT 2619439..2619591 Rhodopseudomonas palustris DX-1 10064653 YP_004108761.1 CDS Rpdx1_2437 NC_014834.1 2619714 2621438 D TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: alv:Alvin_0482 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein CydD 2619714..2621438 Rhodopseudomonas palustris DX-1 10064654 YP_004108762.1 CDS Rpdx1_2438 NC_014834.1 2621431 2623080 D KEGG: alv:Alvin_0481 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; cysteine ABC transporter permease/ATP-binding protein CydC 2621431..2623080 Rhodopseudomonas palustris DX-1 10064655 YP_004108763.1 CDS Rpdx1_2439 NC_014834.1 2623550 2624437 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_4287 LysR family transcriptional regulator; LysR family transcriptional regulator 2623550..2624437 Rhodopseudomonas palustris DX-1 10064656 YP_004108764.1 CDS Rpdx1_2440 NC_014834.1 2624623 2625897 D KEGG: bra:BRADO3420 4-aminobutyrate aminotransferase ((S)-3-amino-2-methylpropionate transaminase); TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; 4-aminobutyrate aminotransferase 2624623..2625897 Rhodopseudomonas palustris DX-1 10064657 YP_004108765.1 CDS Rpdx1_2441 NC_014834.1 2625937 2627388 D KEGG: bra:BRADO0028 succinate-semialdehyde dehydrogenase [NADP+] (SSDH); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinate-semialdehyde dehydrogenase 2625937..2627388 Rhodopseudomonas palustris DX-1 10064658 YP_004108766.1 CDS Rpdx1_2442 NC_014834.1 2627438 2628736 D KEGG: bbt:BBta_4285 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase 2627438..2628736 Rhodopseudomonas palustris DX-1 10064659 YP_004108767.1 CDS Rpdx1_2443 NC_014834.1 2628736 2630325 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rsk:RSKD131_4355 pyruvate decarboxylase; thiamine pyrophosphate domain-containing TPP-binding protein 2628736..2630325 Rhodopseudomonas palustris DX-1 10064660 YP_004108768.1 CDS Rpdx1_2444 NC_014834.1 2630404 2631993 D PFAM: extracellular solute-binding protein family 5; KEGG: azl:AZL_b03280 peptide/nickel transport system substrate-binding protein; family 5 extracellular solute-binding protein 2630404..2631993 Rhodopseudomonas palustris DX-1 10064661 YP_004108769.1 CDS Rpdx1_2445 NC_014834.1 2631990 2633012 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azl:AZL_b03270 peptide/nickel transport system permease protein; binding-protein-dependent transporter inner membrane component 2631990..2633012 Rhodopseudomonas palustris DX-1 10064662 YP_004108770.1 CDS Rpdx1_2446 NC_014834.1 2633025 2633864 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azl:AZL_b03260 peptide/nickel transport system permease protein; binding-protein-dependent transporter inner membrane component 2633025..2633864 Rhodopseudomonas palustris DX-1 10064663 YP_004108771.1 CDS Rpdx1_2447 NC_014834.1 2633861 2635519 D KEGG: azl:AZL_b03250 peptide/nickel transport system ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter-like protein 2633861..2635519 Rhodopseudomonas palustris DX-1 10064664 YP_004108772.1 CDS Rpdx1_2448 NC_014834.1 2635605 2637182 D TIGRFAM: gamma-glutamyltransferase; KEGG: bbt:BBta_7627 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2635605..2637182 Rhodopseudomonas palustris DX-1 10064665 YP_004108773.1 CDS Rpdx1_2449 NC_014834.1 2637354 2638091 D KEGG: ret:RHE_PB00040 hypothetical protein; hypothetical protein 2637354..2638091 Rhodopseudomonas palustris DX-1 10064666 YP_004108774.1 CDS Rpdx1_2450 NC_014834.1 2638002 2638982 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: maq:Maqu_2810 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(2638002..2638982) Rhodopseudomonas palustris DX-1 10064667 YP_004108775.1 CDS Rpdx1_2451 NC_014834.1 2639393 2640058 R PFAM: Protein of unknown function DUF1847; KEGG: cth:Cthe_2788 hypothetical protein; hypothetical protein complement(2639393..2640058) Rhodopseudomonas palustris DX-1 10064668 YP_004108776.1 CDS Rpdx1_2452 NC_014834.1 2640451 2641536 D KEGG: bja:bll6455 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 2640451..2641536 Rhodopseudomonas palustris DX-1 10064669 YP_004108777.1 CDS Rpdx1_2453 NC_014834.1 2641514 2642542 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6454 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 2641514..2642542 Rhodopseudomonas palustris DX-1 10064670 YP_004108778.1 CDS Rpdx1_2454 NC_014834.1 2642536 2643327 D KEGG: bra:BRADO4363 alkanesulfonate ABC transporter, ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2642536..2643327 Rhodopseudomonas palustris DX-1 10064671 YP_004108779.1 CDS Rpdx1_2455 NC_014834.1 2643346 2644191 R KEGG: bja:bll3359 hypothetical protein; hypothetical protein complement(2643346..2644191) Rhodopseudomonas palustris DX-1 10064672 YP_004108780.1 CDS Rpdx1_2456 NC_014834.1 2644383 2644730 D PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: cvi:CV_0893 5-carboxymethyl-2-hydroxymuconate D-isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase 2644383..2644730 Rhodopseudomonas palustris DX-1 10064673 YP_004108781.1 CDS Rpdx1_2457 NC_014834.1 2644977 2646194 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: xau:Xaut_2408 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 2644977..2646194 Rhodopseudomonas palustris DX-1 10064674 YP_004108782.1 CDS Rpdx1_2458 NC_014834.1 2646544 2647188 D KEGG: pde:Pden_0116 hexapaptide repeat-containing transferase; hexapeptide repeat-containing transferase 2646544..2647188 Rhodopseudomonas palustris DX-1 10064675 YP_004108783.1 CDS Rpdx1_2459 NC_014834.1 2648575 2648841 D PFAM: transposase IS3/IS911 family protein; KEGG: oan:Oant_4528 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2648575..2648841 Rhodopseudomonas palustris DX-1 10064676 YP_004108784.1 CDS Rpdx1_2460 NC_014834.1 2648835 2649764 D PFAM: Integrase catalytic region; KEGG: oan:Oant_4683 integrase catalytic region; Integrase catalytic subunit 2648835..2649764 Rhodopseudomonas palustris DX-1 10064677 YP_004108785.1 CDS Rpdx1_2461 NC_014834.1 2649924 2650784 R PFAM: HPr serine kinase domain protein; KEGG: sli:Slin_1942 hypothetical protein; HPr serine kinase domain-containing protein complement(2649924..2650784) Rhodopseudomonas palustris DX-1 10064678 YP_004108786.1 CDS Rpdx1_2462 NC_014834.1 2650944 2651435 R PFAM: Domain of unknown function DUF1863; KEGG: bba:Bd1459 hypothetical protein; hypothetical protein complement(2650944..2651435) Rhodopseudomonas palustris DX-1 10064679 YP_004108787.1 CDS Rpdx1_2463 NC_014834.1 2651448 2652323 R KEGG: rec:RHECIAT_PB0000010 putative anthranilate synthase component I protein; putative anthranilate synthase component I protein complement(2651448..2652323) Rhodopseudomonas palustris DX-1 10064680 YP_004108788.1 CDS Rpdx1_2464 NC_014834.1 2652729 2656502 R KEGG: bbt:BBta_4237 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase class II vitamin B12-dependent; ribonucleotide reductase large subunit; ribonucleoside-diphosphate reductase complement(2652729..2656502) Rhodopseudomonas palustris DX-1 10064681 YP_004108789.1 CDS Rpdx1_2465 NC_014834.1 2657168 2658067 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr4275 transport protein; hypothetical protein 2657168..2658067 Rhodopseudomonas palustris DX-1 10064682 YP_004108790.1 CDS Rpdx1_2466 NC_014834.1 2658174 2659163 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bbt:BBta_4121 putative phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2658174..2659163 Rhodopseudomonas palustris DX-1 10064683 YP_004108791.1 CDS Rpdx1_2467 NC_014834.1 2659362 2660792 D PFAM: Amidase; KEGG: pla:Plav_3043 amidase; amidase 2659362..2660792 Rhodopseudomonas palustris DX-1 10064684 YP_004108792.1 CDS Rpdx1_2468 NC_014834.1 2660882 2661460 D KEGG: nwi:Nwi_1498 hypothetical protein; hypothetical protein 2660882..2661460 Rhodopseudomonas palustris DX-1 10064685 YP_004108793.1 CDS Rpdx1_2469 NC_014834.1 2661607 2662737 D KEGG: nha:Nham_2816 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; 8-amino-7-oxononanoate synthase 2661607..2662737 Rhodopseudomonas palustris DX-1 10064686 YP_004108794.1 CDS Rpdx1_2470 NC_014834.1 2662734 2663372 D TIGRFAM: dethiobiotin synthase; KEGG: nha:Nham_2815 dithiobiotin synthetase; dethiobiotin synthase 2662734..2663372 Rhodopseudomonas palustris DX-1 10064687 YP_004108795.1 CDS Rpdx1_2471 NC_014834.1 2663369 2664652 D KEGG: nha:Nham_2814 adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2663369..2664652 Rhodopseudomonas palustris DX-1 10064688 YP_004108796.1 CDS Rpdx1_2472 NC_014834.1 2664843 2665454 R KEGG: xau:Xaut_4923 hypothetical protein; hypothetical protein complement(2664843..2665454) Rhodopseudomonas palustris DX-1 10064689 YP_004108797.1 CDS Rpdx1_2473 NC_014834.1 2665473 2666216 R PFAM: Transcriptional regulator TetR ; regulatory protein TetR; KEGG: bid:Bind_2883 TetR family transcriptional regulator; transcriptional regulator TetR complement(2665473..2666216) Rhodopseudomonas palustris DX-1 10064690 YP_004108798.1 CDS Rpdx1_2474 NC_014834.1 2666379 2667788 R KEGG: nha:Nham_2234 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase complement(2666379..2667788) Rhodopseudomonas palustris DX-1 10064691 YP_004108799.1 CDS Rpdx1_2475 NC_014834.1 2667876 2668214 R PFAM: nitrogen regulatory protein P-II; KEGG: bja:blr4948 nitrogen regulatory protein PII; nitrogen regulatory protein P-II complement(2667876..2668214) Rhodopseudomonas palustris DX-1 10064692 YP_004108800.1 CDS Rpdx1_2476 NC_014834.1 2668618 2670117 D KEGG: bra:BRADO4203 hypothetical protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; carbohydrate kinase 2668618..2670117 Rhodopseudomonas palustris DX-1 10064693 YP_004108801.1 CDS Rpdx1_2477 NC_014834.1 2670161 2671489 R PFAM: multicopper oxidase type 2; multicopper oxidase type 1; KEGG: nha:Nham_2231 twin-arginine translocation pathway signal; multicopper oxidase type 2 complement(2670161..2671489) Rhodopseudomonas palustris DX-1 10064694 YP_004108802.1 CDS Rpdx1_2478 NC_014834.1 2671871 2673229 D KEGG: bja:bll4945 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type; trigger factor 2671871..2673229 Rhodopseudomonas palustris DX-1 10064696 YP_004108803.1 CDS Rpdx1_2479 NC_014834.1 2673539 2674177 D KEGG: oca:OCAR_5908 Clp protease; PFAM: peptidase S14 ClpP; endopeptidase Clp 2673539..2674177 Rhodopseudomonas palustris DX-1 10064697 YP_004108804.1 CDS Rpdx1_2480 NC_014834.1 2674564 2675838 D TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; KEGG: nha:Nham_2228 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX 2674564..2675838 Rhodopseudomonas palustris DX-1 10064698 YP_004108805.1 CDS Rpdx1_2481 NC_014834.1 2676157 2678589 D SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: bra:BRADO4196 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATP-dependent protease La 2676157..2678589 Rhodopseudomonas palustris DX-1 10064699 YP_004108806.1 CDS Rpdx1_2482 NC_014834.1 2678950 2681535 R TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bja:blr4813 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(2678950..2681535) Rhodopseudomonas palustris DX-1 10064700 YP_004108807.1 CDS Rpdx1_2483 NC_014834.1 2682106 2685246 R KEGG: azc:AZC_3305 hydrophobe/amphiphile efflux-1; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(2682106..2685246) Rhodopseudomonas palustris DX-1 10064702 YP_004108808.1 CDS Rpdx1_2484 NC_014834.1 2685275 2686519 R KEGG: xau:Xaut_0513 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(2685275..2686519) Rhodopseudomonas palustris DX-1 10064703 YP_004108809.1 CDS Rpdx1_2485 NC_014834.1 2686665 2687918 R TIGRFAM: peptidase T; KEGG: bra:BRADO4189 peptidase T; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase T complement(2686665..2687918) Rhodopseudomonas palustris DX-1 10064704 YP_004108810.1 CDS Rpdx1_2486 NC_014834.1 2688215 2688526 R KEGG: nha:Nham_2223 histone-like DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(2688215..2688526) Rhodopseudomonas palustris DX-1 10064705 YP_004108811.1 CDS Rpdx1_2487 NC_014834.1 2688857 2689417 R KEGG: mes:Meso_1180 hypothetical protein; hypothetical protein complement(2688857..2689417) Rhodopseudomonas palustris DX-1 10064707 YP_004108812.1 CDS Rpdx1_2488 NC_014834.1 2689414 2690706 R KEGG: mes:Meso_1180 hypothetical protein; hypothetical protein complement(2689414..2690706) Rhodopseudomonas palustris DX-1 10064708 YP_004108813.1 CDS Rpdx1_2489 NC_014834.1 2690699 2690986 R KEGG: xau:Xaut_3596 hypothetical protein; hypothetical protein complement(2690699..2690986) Rhodopseudomonas palustris DX-1 10064709 YP_004108814.1 CDS Rpdx1_2490 NC_014834.1 2690997 2691332 R KEGG: mdo:100022193 similar to regenerating islet-derived 1 alpha (pancreatic stone protein, pancreatic thread protein); regenerating islet-derived 1 alpha-like protein complement(2690997..2691332) Rhodopseudomonas palustris DX-1 10064710 YP_004108815.1 CDS Rpdx1_2491 NC_014834.1 2691329 2691616 R KEGG: bid:Bind_2963 aldo/keto reductase; aldo/keto reductase complement(2691329..2691616) Rhodopseudomonas palustris DX-1 10064711 YP_004108816.1 CDS Rpdx1_2492 NC_014834.1 2691622 2691897 R KEGG: azo:azo2662 hypothetical protein; hypothetical protein complement(2691622..2691897) Rhodopseudomonas palustris DX-1 10064712 YP_004108817.1 CDS Rpdx1_2493 NC_014834.1 2691894 2692130 R KEGG: tac:Ta0451m AAA family ATPase; hypothetical protein complement(2691894..2692130) Rhodopseudomonas palustris DX-1 10064713 YP_004108818.1 CDS Rpdx1_2494 NC_014834.1 2692133 2692333 R KEGG: osa:4346753 hypothetical protein; hypothetical protein complement(2692133..2692333) Rhodopseudomonas palustris DX-1 10064714 YP_004108819.1 CDS Rpdx1_2495 NC_014834.1 2692339 2692797 R KEGG: cak:Caul_2278 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(2692339..2692797) Rhodopseudomonas palustris DX-1 10064715 YP_004108820.1 CDS Rpdx1_2496 NC_014834.1 2692794 2693270 R KEGG: mea:Mex_1p3949 hypothetical protein; hypothetical protein complement(2692794..2693270) Rhodopseudomonas palustris DX-1 10064716 YP_004108821.1 CDS Rpdx1_2497 NC_014834.1 2693273 2693536 R KEGG: rop:ROP_45740 putative fatty-acid--CoA ligase; hypothetical protein complement(2693273..2693536) Rhodopseudomonas palustris DX-1 10064717 YP_004108822.1 CDS Rpdx1_2498 NC_014834.1 2693848 2694219 D KEGG: mva:Mvan_3805 cobalt transport protein; hypothetical protein 2693848..2694219 Rhodopseudomonas palustris DX-1 10064718 YP_004108823.1 CDS Rpdx1_2499 NC_014834.1 2694191 2694415 R KEGG: eba:ebA2185 hypothetical protein; hypothetical protein complement(2694191..2694415) Rhodopseudomonas palustris DX-1 10064719 YP_004108824.1 CDS Rpdx1_2500 NC_014834.1 2694412 2694714 R KEGG: hba:Hbal_1124 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(2694412..2694714) Rhodopseudomonas palustris DX-1 10064720 YP_004108825.1 CDS Rpdx1_2501 NC_014834.1 2694799 2695068 D KEGG: tai:Taci_1585 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2694799..2695068 Rhodopseudomonas palustris DX-1 10064721 YP_004108826.1 CDS Rpdx1_2502 NC_014834.1 2695215 2695454 D KEGG: gob:Gobs_4404 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; hypothetical protein 2695215..2695454 Rhodopseudomonas palustris DX-1 10064722 YP_004108827.1 CDS Rpdx1_2503 NC_014834.1 2695578 2695835 R KEGG: oca:OCAR_6085 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein complement(2695578..2695835) Rhodopseudomonas palustris DX-1 10064723 YP_004108828.1 CDS Rpdx1_2504 NC_014834.1 2696007 2697137 D KEGG: nfa:nfa13520 hypothetical protein; hypothetical protein 2696007..2697137 Rhodopseudomonas palustris DX-1 10064724 YP_004108829.1 CDS Rpdx1_2505 NC_014834.1 2697137 2697457 D KEGG: sth:STH3129 3-deoxy-7-phosphoheptulonate synthase; hypothetical protein 2697137..2697457 Rhodopseudomonas palustris DX-1 10064725 YP_004108830.1 CDS Rpdx1_2506 NC_014834.1 2697457 2697699 D hypothetical protein 2697457..2697699 Rhodopseudomonas palustris DX-1 10064726 YP_004108831.1 CDS Rpdx1_2507 NC_014834.1 2697696 2697977 D KEGG: cin:100187255 similar to Chromosome 7 open reading frame 28B; hypothetical protein 2697696..2697977 Rhodopseudomonas palustris DX-1 10064727 YP_004108832.1 CDS Rpdx1_2508 NC_014834.1 2697981 2698265 D PFAM: Protein of unknown function DUF2312; KEGG: nha:Nham_1221 hypothetical protein; hypothetical protein 2697981..2698265 Rhodopseudomonas palustris DX-1 10064728 YP_004108833.1 CDS Rpdx1_2509 NC_014834.1 2698265 2698873 D KEGG: azl:AZL_020190 hypothetical protein; hypothetical protein 2698265..2698873 Rhodopseudomonas palustris DX-1 10064729 YP_004108834.1 CDS Rpdx1_2510 NC_014834.1 2699221 2699412 D hypothetical protein 2699221..2699412 Rhodopseudomonas palustris DX-1 10064730 YP_004108835.1 CDS Rpdx1_2511 NC_014834.1 2699701 2700267 D KEGG: kra:Krad_1254 homoserine kinase; hypothetical protein 2699701..2700267 Rhodopseudomonas palustris DX-1 10064731 YP_004108836.1 CDS Rpdx1_2512 NC_014834.1 2700617 2701543 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aac:Aaci_2995 integrase family protein; integrase family protein 2700617..2701543 Rhodopseudomonas palustris DX-1 10064732 YP_004108837.1 CDS Rpdx1_2513 NC_014834.1 2701543 2702217 D KEGG: ret:RHE_CH01104 hypothetical protein; hypothetical protein 2701543..2702217 Rhodopseudomonas palustris DX-1 10064733 YP_004108838.1 CDS Rpdx1_2514 NC_014834.1 2702342 2702848 R KEGG: mmi:MMAR_4596 hypothetical protein; hypothetical protein complement(2702342..2702848) Rhodopseudomonas palustris DX-1 10064734 YP_004108839.1 CDS Rpdx1_2515 NC_014834.1 2702848 2703114 R KEGG: hypothetical protein; hypothetical protein complement(2702848..2703114) Rhodopseudomonas palustris DX-1 10064735 YP_004108840.1 CDS Rpdx1_2516 NC_014834.1 2703274 2703525 D KEGG: cbi:CLJ_B1819 gp9; hypothetical protein 2703274..2703525 Rhodopseudomonas palustris DX-1 10064736 YP_004108841.1 CDS Rpdx1_2517 NC_014834.1 2703577 2704128 D KEGG: bcj:BCAL2888 ribonuclease E 1; hypothetical protein 2703577..2704128 Rhodopseudomonas palustris DX-1 10064737 YP_004108842.1 CDS Rpdx1_2518 NC_014834.1 2704180 2704581 D PFAM: Terminase small subunit; KEGG: smd:Smed_1897 phage terminase small subunit; terminase small subunit 2704180..2704581 Rhodopseudomonas palustris DX-1 10064738 YP_004108843.1 CDS Rpdx1_2519 NC_014834.1 2704556 2706070 D KEGG: mlo:mll0463 bacteriophage terminase large subunit-like protein; bacteriophage terminase large subunit-like protein 2704556..2706070 Rhodopseudomonas palustris DX-1 10064739 YP_004108844.1 CDS Rpdx1_2520 NC_014834.1 2706070 2708382 D KEGG: mlo:mll0462 hypothetical protein; hypothetical protein 2706070..2708382 Rhodopseudomonas palustris DX-1 10064740 YP_004108845.1 CDS Rpdx1_2521 NC_014834.1 2708382 2708732 D KEGG: mlo:mll0459 hypothetical protein; hypothetical protein 2708382..2708732 Rhodopseudomonas palustris DX-1 10064741 YP_004108846.1 CDS Rpdx1_2522 NC_014834.1 2708792 2710027 D KEGG: mlo:mll0458 hypothetical protein; hypothetical protein 2708792..2710027 Rhodopseudomonas palustris DX-1 10064742 YP_004108847.1 CDS Rpdx1_2523 NC_014834.1 2710052 2711071 D KEGG: mlo:mll0457 hypothetical protein; hypothetical protein 2710052..2711071 Rhodopseudomonas palustris DX-1 10064743 YP_004108848.1 CDS Rpdx1_2524 NC_014834.1 2711160 2711675 D KEGG: mlo:mll0455 hypothetical protein; hypothetical protein 2711160..2711675 Rhodopseudomonas palustris DX-1 10064744 YP_004108849.1 CDS Rpdx1_2525 NC_014834.1 2711688 2711852 D hypothetical protein 2711688..2711852 Rhodopseudomonas palustris DX-1 10064745 YP_004108850.1 CDS Rpdx1_2526 NC_014834.1 2711935 2712711 D KEGG: mlo:mll0454 hypothetical protein; hypothetical protein 2711935..2712711 Rhodopseudomonas palustris DX-1 10064746 YP_004108851.1 CDS Rpdx1_2527 NC_014834.1 2712708 2713409 D KEGG: mlo:mll0453 hypothetical protein; hypothetical protein 2712708..2713409 Rhodopseudomonas palustris DX-1 10064747 YP_004108852.1 CDS Rpdx1_2528 NC_014834.1 2713409 2715085 D KEGG: mlo:mll0452 hypothetical protein; hypothetical protein 2713409..2715085 Rhodopseudomonas palustris DX-1 10064748 YP_004108853.1 CDS Rpdx1_2529 NC_014834.1 2715082 2715465 D KEGG: mes:Meso_0236 hypothetical protein; hypothetical protein 2715082..2715465 Rhodopseudomonas palustris DX-1 10064749 YP_004108854.1 CDS Rpdx1_2530 NC_014834.1 2715468 2716493 D KEGG: ret:RHE_CH01103 hypothetical protein; hypothetical protein 2715468..2716493 Rhodopseudomonas palustris DX-1 10064750 YP_004108855.1 CDS Rpdx1_2531 NC_014834.1 2716493 2718238 D PFAM: cell wall hydrolase SleB; KEGG: mea:Mex_1p4005 hypothetical protein; cell wall hydrolase SleB 2716493..2718238 Rhodopseudomonas palustris DX-1 10064751 YP_004108856.1 CDS Rpdx1_2532 NC_014834.1 2718239 2720401 D KEGG: mea:Mex_1p4005 hypothetical protein; hypothetical protein 2718239..2720401 Rhodopseudomonas palustris DX-1 10064752 YP_004108857.1 CDS Rpdx1_2533 NC_014834.1 2720676 2721470 D TIGRFAM: methyltransferase FkbM family; KEGG: acr:Acry_1567 FkbM family methyltransferase; FkbM family methyltransferase 2720676..2721470 Rhodopseudomonas palustris DX-1 10064753 YP_004108858.1 CDS Rpdx1_2534 NC_014834.1 2721553 2722434 D KEGG: mes:Meso_0240 microcystin-dependent protein-like; hypothetical protein 2721553..2722434 Rhodopseudomonas palustris DX-1 10064754 YP_004108859.1 CDS Rpdx1_2535 NC_014834.1 2722438 2724417 D KEGG: ptr:745467 mucin 19, oligomeric; hypothetical protein 2722438..2724417 Rhodopseudomonas palustris DX-1 10064755 YP_004108860.1 CDS Rpdx1_2536 NC_014834.1 2724492 2724764 D KEGG: rlt:Rleg2_0750 hypothetical protein; hypothetical protein 2724492..2724764 Rhodopseudomonas palustris DX-1 10064756 YP_004108861.1 CDS Rpdx1_2537 NC_014834.1 2724761 2725309 D PFAM: glycoside hydrolase family 24; KEGG: bmj:BMULJ_04616 bacteriophage lysozyme; glycoside hydrolase family protein 2724761..2725309 Rhodopseudomonas palustris DX-1 10064757 YP_004108862.1 CDS Rpdx1_2538 NC_014834.1 2725314 2725811 D KEGG: nha:Nham_3316 hypothetical protein; hypothetical protein 2725314..2725811 Rhodopseudomonas palustris DX-1 10064758 YP_004108863.1 CDS Rpdx1_2539 NC_014834.1 2725759 2726028 D KEGG: lbz:LbrM11_V2.0500 hypothetical protein; hypothetical protein 2725759..2726028 Rhodopseudomonas palustris DX-1 10064759 YP_004108864.1 CDS Rpdx1_2540 NC_014834.1 2726025 2726312 D KEGG: PspC domain-containing protein; hypothetical protein 2726025..2726312 Rhodopseudomonas palustris DX-1 10064760 YP_004108865.1 CDS Rpdx1_2541 NC_014834.1 2726380 2726760 R KEGG: aav:Aave_1732 hypothetical protein; hypothetical protein complement(2726380..2726760) Rhodopseudomonas palustris DX-1 10064761 YP_004108866.1 CDS Rpdx1_2542 NC_014834.1 2726747 2726917 R KEGG: xtr:780387 MORC family CW-type zinc finger 3; hypothetical protein complement(2726747..2726917) Rhodopseudomonas palustris DX-1 10064762 YP_004108867.1 CDS Rpdx1_2543 NC_014834.1 2726914 2727291 R KEGG: aav:Aave_2362 hypothetical protein; hypothetical protein complement(2726914..2727291) Rhodopseudomonas palustris DX-1 10064763 YP_004108868.1 CDS Rpdx1_2544 NC_014834.1 2727295 2727684 R KEGG: bbu:BB_L40 ErpO; hypothetical protein complement(2727295..2727684) Rhodopseudomonas palustris DX-1 10064764 YP_004108869.1 CDS Rpdx1_2545 NC_014834.1 2727859 2728080 R KEGG: sti:Sthe_1477 hypothetical protein; hypothetical protein complement(2727859..2728080) Rhodopseudomonas palustris DX-1 10064765 YP_004108870.1 CDS Rpdx1_2547 NC_014834.1 2728738 2729562 R KEGG: xau:Xaut_3687 hypothetical protein; hypothetical protein complement(2728738..2729562) Rhodopseudomonas palustris DX-1 10064767 YP_004108871.1 CDS Rpdx1_2549 NC_014834.1 2729855 2730358 R KEGG: sro:Sros_3239 hypothetical protein; hypothetical protein complement(2729855..2730358) Rhodopseudomonas palustris DX-1 10064769 YP_004108872.1 CDS Rpdx1_2550 NC_014834.1 2730940 2731134 R KEGG: bja:bsl2206 hypothetical protein; hypothetical protein complement(2730940..2731134) Rhodopseudomonas palustris DX-1 10064770 YP_004108873.1 CDS Rpdx1_2551 NC_014834.1 2731445 2731810 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: oca:OCAR_5922 NADH dehydrogenase subunit A; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 2731445..2731810 Rhodopseudomonas palustris DX-1 10064771 YP_004108874.1 CDS Rpdx1_2552 NC_014834.1 2731822 2732418 D TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: bja:bll4918 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 2731822..2732418 Rhodopseudomonas palustris DX-1 10064772 YP_004108875.1 CDS Rpdx1_2553 NC_014834.1 2732432 2733046 D KEGG: nwi:Nwi_1886 NADH dehydrogenase subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 2732432..2733046 Rhodopseudomonas palustris DX-1 10064773 YP_004108876.1 CDS Rpdx1_2554 NC_014834.1 2733098 2734306 D TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: nwi:Nwi_1885 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I subunit D 2733098..2734306 Rhodopseudomonas palustris DX-1 10064774 YP_004108877.1 CDS Rpdx1_2555 NC_014834.1 2734303 2735274 D TIGRFAM: methyltransferase FkbM family; KEGG: nwi:Nwi_1884 methyltransferase FkbM; FkbM family methyltransferase 2734303..2735274 Rhodopseudomonas palustris DX-1 10064775 YP_004108878.1 CDS Rpdx1_2556 NC_014834.1 2735277 2736026 D TIGRFAM: NADH-quinone oxidoreductase, E subunit; KEGG: oca:OCAR_5927 NADH dehydrogenase subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E 2735277..2736026 Rhodopseudomonas palustris DX-1 10064776 YP_004108879.1 CDS Rpdx1_2557 NC_014834.1 2736023 2736238 D KEGG: bra:BRADO4180 hypothetical protein; hypothetical protein 2736023..2736238 Rhodopseudomonas palustris DX-1 10064777 YP_004108880.1 CDS Rpdx1_2558 NC_014834.1 2736257 2737582 D TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: oca:OCAR_5928 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F 2736257..2737582 Rhodopseudomonas palustris DX-1 10064778 YP_004108881.1 CDS Rpdx1_2559 NC_014834.1 2737588 2739663 D KEGG: nha:Nham_2214 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; NADH-quinone oxidoreductase chain G; NADH-quinone oxidoreductase subunit G 2737588..2739663 Rhodopseudomonas palustris DX-1 10064779 YP_004108882.1 CDS Rpdx1_2560 NC_014834.1 2739673 2740698 D PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: nha:Nham_2213 NADH dehydrogenase subunit H; respiratory-chain NADH dehydrogenase subunit 1 2739673..2740698 Rhodopseudomonas palustris DX-1 10064780 YP_004108883.1 CDS Rpdx1_2561 NC_014834.1 2740706 2741194 D KEGG: nwi:Nwi_1879 NADH dehydrogenase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH-quinone oxidoreductase subunit I 2740706..2741194 Rhodopseudomonas palustris DX-1 10064781 YP_004108884.1 CDS Rpdx1_2562 NC_014834.1 2741204 2741842 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: nwi:Nwi_1878 NADH dehydrogenase subunit J; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 2741204..2741842 Rhodopseudomonas palustris DX-1 10064782 YP_004108885.1 CDS Rpdx1_2563 NC_014834.1 2741839 2742150 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: oca:OCAR_5933 NADH dehydrogenase subunit K; NADH-ubiquinone oxidoreductase subunit 4L 2741839..2742150 Rhodopseudomonas palustris DX-1 10064783 YP_004108886.1 CDS Rpdx1_2564 NC_014834.1 2742210 2744327 D TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: bja:bll4906 NADH dehydrogenase subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 2742210..2744327 Rhodopseudomonas palustris DX-1 10064784 YP_004108887.1 CDS Rpdx1_2565 NC_014834.1 2744328 2745845 D KEGG: bbt:BBta_4549 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 2744328..2745845 Rhodopseudomonas palustris DX-1 10064785 YP_004108888.1 CDS Rpdx1_2566 NC_014834.1 2745865 2747304 D KEGG: bja:bll4904 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 2745865..2747304 Rhodopseudomonas palustris DX-1 10064786 YP_004108889.1 CDS Rpdx1_2567 NC_014834.1 2747305 2748111 D KEGG: bja:bll4903 biotin--protein ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; biotin--acetyl-CoA-carboxylase ligase 2747305..2748111 Rhodopseudomonas palustris DX-1 10064787 YP_004108890.1 CDS Rpdx1_2568 NC_014834.1 2748111 2749781 D PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: bra:BRADO4169 metallo-beta-lactamase family hydrolase; RNA-metabolising metallo-beta-lactamase 2748111..2749781 Rhodopseudomonas palustris DX-1 10064788 YP_004108891.1 CDS Rpdx1_2569 NC_014834.1 2749822 2750226 D TIGRFAM: methylmalonyl-CoA epimerase; KEGG: bbt:BBta_4545 methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; methylmalonyl-CoA epimerase 2749822..2750226 Rhodopseudomonas palustris DX-1 10064789 YP_004108892.1 CDS Rpdx1_2570 NC_014834.1 2750230 2750511 D PFAM: protein of unknown function DUF1467; KEGG: bra:BRADO4167 hypothetical protein; hypothetical protein 2750230..2750511 Rhodopseudomonas palustris DX-1 10064790 YP_004108893.1 CDS Rpdx1_2571 NC_014834.1 2751100 2751504 D KEGG: bra:BRADO4161 putative signal peptide; hypothetical protein 2751100..2751504 Rhodopseudomonas palustris DX-1 10064791 YP_004108894.1 CDS Rpdx1_2572 NC_014834.1 2751623 2752162 D PFAM: protein of unknown function DUF461; KEGG: bja:bll4880 hypothetical protein; hypothetical protein 2751623..2752162 Rhodopseudomonas palustris DX-1 10064792 YP_004108895.1 CDS Rpdx1_2573 NC_014834.1 2752162 2752689 D PFAM: nuclear export factor GLE1; KEGG: nha:Nham_2199 nuclear export factor GLE1; nuclear export factor GLE1 2752162..2752689 Rhodopseudomonas palustris DX-1 10064793 YP_004108896.1 CDS Rpdx1_2574 NC_014834.1 2752686 2754284 D PFAM: copper resistance protein CopC; KEGG: nha:Nham_2198 copper resistance D; copper resistance protein CopC 2752686..2754284 Rhodopseudomonas palustris DX-1 10064794 YP_004108897.1 CDS Rpdx1_2575 NC_014834.1 2754460 2755779 D KEGG: bja:bll4877 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; prolyl-tRNA synthetase 2754460..2755779 Rhodopseudomonas palustris DX-1 10064795 YP_004108898.1 CDS Rpdx1_2576 NC_014834.1 2755868 2757136 D KEGG: nha:Nham_2196 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; lipoprotein releasing system transmembrane protein 2755868..2757136 Rhodopseudomonas palustris DX-1 10064796 YP_004108899.1 CDS Rpdx1_2577 NC_014834.1 2757147 2757845 D KEGG: bja:bll4875 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2757147..2757845 Rhodopseudomonas palustris DX-1 10064797 YP_004108900.1 CDS Rpdx1_2580 NC_014834.1 2758861 2758959 D KEGG: bra:BRADO4146 hypothetical protein; hypothetical protein 2758861..2758959 Rhodopseudomonas palustris DX-1 10064800 YP_004108901.1 CDS Rpdx1_2581 NC_014834.1 2759133 2762588 D SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: bra:BRADO4145 DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III subunit alpha 2759133..2762588 Rhodopseudomonas palustris DX-1 10064801 YP_004108902.1 CDS Rpdx1_2582 NC_014834.1 2762747 2765182 D PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bja:bll4862 hypothetical protein; peptidase C14 caspase catalytic subunit p20 2762747..2765182 Rhodopseudomonas palustris DX-1 10064802 YP_004108903.1 CDS Rpdx1_2583 NC_014834.1 2765440 2766435 D KEGG: nha:Nham_1694 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; 30S ribosomal protein S2 2765440..2766435 Rhodopseudomonas palustris DX-1 10064803 YP_004108904.1 CDS Rpdx1_2584 NC_014834.1 2766560 2767486 D KEGG: bja:bll4860 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; translation elongation factor Ts 2766560..2767486 Rhodopseudomonas palustris DX-1 10064804 YP_004108905.1 CDS Rpdx1_2585 NC_014834.1 2767559 2768275 D KEGG: bbt:BBta_4515 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase 2767559..2768275 Rhodopseudomonas palustris DX-1 10064805 YP_004108906.1 CDS Rpdx1_2586 NC_014834.1 2768339 2768899 D KEGG: nwi:Nwi_1856 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; ribosome recycling factor 2768339..2768899 Rhodopseudomonas palustris DX-1 10064806 YP_004108907.1 CDS Rpdx1_2587 NC_014834.1 2769108 2769866 D TIGRFAM: undecaprenyl diphosphate synthase; KEGG: nha:Nham_1698 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 2769108..2769866 Rhodopseudomonas palustris DX-1 10064807 YP_004108908.1 CDS Rpdx1_2588 NC_014834.1 2769872 2770720 D PFAM: phosphatidate cytidylyltransferase; KEGG: nha:Nham_1699 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 2769872..2770720 Rhodopseudomonas palustris DX-1 10064808 YP_004108909.1 CDS Rpdx1_2589 NC_014834.1 2770725 2771948 D TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: bbt:BBta_4511 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2770725..2771948 Rhodopseudomonas palustris DX-1 10064809 YP_004108910.1 CDS Rpdx1_2590 NC_014834.1 2771993 2773144 D TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: nwi:Nwi_1852 peptidase M50, putative membrane-associated zinc metallopeptidase; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 2771993..2773144 Rhodopseudomonas palustris DX-1 10064810 YP_004108911.1 CDS Rpdx1_2591 NC_014834.1 2773317 2775857 D KEGG: bbt:BBta_4509 surface antigen domain-containing protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; outer membrane protein assembly complex, YaeT protein 2773317..2775857 Rhodopseudomonas palustris DX-1 10064811 YP_004108912.1 CDS Rpdx1_2592 NC_014834.1 2775990 2777072 D KEGG: bja:bll4852 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 2775990..2777072 Rhodopseudomonas palustris DX-1 10064812 YP_004108913.1 CDS Rpdx1_2593 NC_014834.1 2777072 2777527 D KEGG: nwi:Nwi_1849 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2777072..2777527 Rhodopseudomonas palustris DX-1 10064813 YP_004108914.1 CDS Rpdx1_2594 NC_014834.1 2777536 2778378 D TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: nha:Nham_1705 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 2777536..2778378 Rhodopseudomonas palustris DX-1 10064814 YP_004108915.1 CDS Rpdx1_2595 NC_014834.1 2778397 2779254 D PFAM: protein of unknown function DUF1009; KEGG: nha:Nham_1706 hypothetical protein; hypothetical protein 2778397..2779254 Rhodopseudomonas palustris DX-1 10064815 YP_004108916.1 CDS Rpdx1_2596 NC_014834.1 2779251 2780444 D TIGRFAM: lipid-A-disaccharide synthase; KEGG: bja:bll4847 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase 2779251..2780444 Rhodopseudomonas palustris DX-1 10064816 YP_004108917.1 CDS Rpdx1_2597 NC_014834.1 2780706 2782010 R KEGG: bra:BRADO4126 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I complement(2780706..2782010) Rhodopseudomonas palustris DX-1 10064817 YP_004108918.1 CDS Rpdx1_2598 NC_014834.1 2782161 2783582 R KEGG: nwi:Nwi_1844 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase complement(2782161..2783582) Rhodopseudomonas palustris DX-1 10064818 YP_004108919.1 CDS Rpdx1_2599 NC_014834.1 2783744 2785426 D KEGG: bra:BRADO4124 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; glutaminyl-tRNA synthetase 2783744..2785426 Rhodopseudomonas palustris DX-1 10064819 YP_004108920.1 CDS Rpdx1_2600 NC_014834.1 2785519 2787783 D KEGG: bja:bll4830 hypothetical protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; ComEC/Rec2-like protein 2785519..2787783 Rhodopseudomonas palustris DX-1 10064820 YP_004108921.1 CDS Rpdx1_2601 NC_014834.1 2787852 2788562 R TIGRFAM: LexA repressor; KEGG: bra:BRADO4120 LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; LexA DNA-binding domain protein; LexA family transcriptional repressor complement(2787852..2788562) Rhodopseudomonas palustris DX-1 10064821 YP_004108922.1 CDS Rpdx1_2602 NC_014834.1 2788738 2789949 R KEGG: nha:Nham_1730 MoeA-likedomain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; molybdenum cofactor synthesis domain-containing protein complement(2788738..2789949) Rhodopseudomonas palustris DX-1 10064822 YP_004108923.1 CDS Rpdx1_2603 NC_014834.1 2790147 2790482 D KEGG: cwo:Cwoe_0867 major facilitator superfamily MFS_1; hypothetical protein 2790147..2790482 Rhodopseudomonas palustris DX-1 10064823 YP_004108924.1 CDS Rpdx1_2604 NC_014834.1 2790497 2790988 R PFAM: thioesterase superfamily protein; KEGG: pfs:PFLU4203 putative thioesterase; thioesterase superfamily protein complement(2790497..2790988) Rhodopseudomonas palustris DX-1 10064824 YP_004108925.1 CDS Rpdx1_2605 NC_014834.1 2791027 2791653 R KEGG: bra:BRADO4115 putative haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(2791027..2791653) Rhodopseudomonas palustris DX-1 10064825 YP_004108926.1 CDS Rpdx1_2606 NC_014834.1 2791907 2792761 D PFAM: OmpA/MotB domain protein; KEGG: bja:blr3801 chemotaxis protein; OmpA/MotB domain-containing protein 2791907..2792761 Rhodopseudomonas palustris DX-1 10064826 YP_004108927.1 CDS Rpdx1_2607 NC_014834.1 2792795 2793043 R PFAM: type IV pilus assembly PilZ; KEGG: bja:bsr0173 hypothetical protein; type IV pilus assembly PilZ complement(2792795..2793043) Rhodopseudomonas palustris DX-1 10064827 YP_004108928.1 CDS Rpdx1_2608 NC_014834.1 2793202 2793702 R PFAM: heat shock protein Hsp20; KEGG: pde:Pden_3146 heat shock protein HSP20; heat shock protein Hsp20 complement(2793202..2793702) Rhodopseudomonas palustris DX-1 10064828 YP_004108929.1 CDS Rpdx1_2609 NC_014834.1 2793942 2794418 D KEGG: nwi:Nwi_1114 hypothetical protein; hypothetical protein 2793942..2794418 Rhodopseudomonas palustris DX-1 10064829 YP_004108930.1 CDS Rpdx1_2610 NC_014834.1 2794545 2797103 R KEGG: bja:blr3815 putative cation-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; HAD superfamily P-type ATPase complement(2794545..2797103) Rhodopseudomonas palustris DX-1 10064830 YP_004108931.1 CDS Rpdx1_2611 NC_014834.1 2797141 2797671 R KEGG: bja:blr4811 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C complement(2797141..2797671) Rhodopseudomonas palustris DX-1 10064831 YP_004108932.1 CDS Rpdx1_2612 NC_014834.1 2797680 2798477 R KEGG: bra:BRADO4110 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase complement(2797680..2798477) Rhodopseudomonas palustris DX-1 10064832 YP_004108933.1 CDS Rpdx1_2614 NC_014834.1 2798615 2799631 R TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: nha:Nham_1734 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase complement(2798615..2799631) Rhodopseudomonas palustris DX-1 10064834 YP_004108934.1 CDS Rpdx1_2615 NC_014834.1 2799668 2801569 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bja:blr4808 peptidyl-prolyl cis-trans isomerse; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2799668..2801569) Rhodopseudomonas palustris DX-1 10064835 YP_004108935.1 CDS Rpdx1_2616 NC_014834.1 2801825 2802601 D TIGRFAM: triosephosphate isomerase; KEGG: bja:bll4807 triosephosphate isomerase; PFAM: triosephosphate isomerase; triosephosphate isomerase 2801825..2802601 Rhodopseudomonas palustris DX-1 10064836 YP_004108936.1 CDS Rpdx1_2617 NC_014834.1 2802776 2803183 D KEGG: bbt:BBta_4477 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 2802776..2803183 Rhodopseudomonas palustris DX-1 10064837 YP_004108937.1 CDS Rpdx1_2618 NC_014834.1 2803350 2804981 D TIGRFAM: CTP synthase; KEGG: bja:bll4805 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; CTP synthase 2803350..2804981 Rhodopseudomonas palustris DX-1 10064838 YP_004108938.1 CDS Rpdx1_2619 NC_014834.1 2804996 2805382 R PFAM: PAAR repeat-containing protein; KEGG: nwi:Nwi_1832 hypothetical protein; PAAR repeat-containing protein complement(2804996..2805382) Rhodopseudomonas palustris DX-1 10064839 YP_004108939.1 CDS Rpdx1_2620 NC_014834.1 2805514 2806371 D KEGG: avi:Avi_9163 hypothetical protein; hypothetical protein 2805514..2806371 Rhodopseudomonas palustris DX-1 10064840 YP_004108940.1 CDS Rpdx1_2621 NC_014834.1 2806405 2806680 R KEGG: mex:Mext_0337 hypothetical protein; hypothetical protein complement(2806405..2806680) Rhodopseudomonas palustris DX-1 10064841 YP_004108941.1 CDS Rpdx1_2622 NC_014834.1 2806670 2806924 R PFAM: protein of unknown function DUF497; KEGG: swi:Swit_1213 hypothetical protein; hypothetical protein complement(2806670..2806924) Rhodopseudomonas palustris DX-1 10064842 YP_004108942.1 CDS Rpdx1_2623 NC_014834.1 2807034 2807360 D PFAM: NIPSNAP family containing protein; KEGG: bbt:BBta_4475 hypothetical protein; NIPSNAP family containing protein 2807034..2807360 Rhodopseudomonas palustris DX-1 10064843 YP_004108943.1 CDS Rpdx1_2624 NC_014834.1 2807473 2808339 D KEGG: oca:OCAR_6297 hypothetical protein; hypothetical protein 2807473..2808339 Rhodopseudomonas palustris DX-1 10064844 YP_004108944.1 CDS Rpdx1_2625 NC_014834.1 2808340 2809203 D TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; KEGG: bra:BRADO4101 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; 2-dehydro-3-deoxyphosphooctonate aldolase 2808340..2809203 Rhodopseudomonas palustris DX-1 10064845 YP_004108945.1 CDS Rpdx1_2626 NC_014834.1 2809256 2811409 R PFAM: glycosyl transferase family 2; KEGG: bra:BRADO1946 glucosyltransferase MdoH; glycosyl transferase family 2 protein complement(2809256..2811409) Rhodopseudomonas palustris DX-1 10064846 YP_004108946.1 CDS Rpdx1_2627 NC_014834.1 2811397 2812908 R PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: bja:bll8054 glucan biosynthesis protein G; periplasmic glucan biosynthesis protein MdoG complement(2811397..2812908) Rhodopseudomonas palustris DX-1 10064847 YP_004108947.1 CDS Rpdx1_2628 NC_014834.1 2812995 2813471 R TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: bbt:BBta_4472 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; 7-cyano-7-deazaguanine reductase complement(2812995..2813471) Rhodopseudomonas palustris DX-1 10064848 YP_004108948.1 CDS Rpdx1_2629 NC_014834.1 2813657 2814940 D TIGRFAM: enolase; KEGG: bbt:BBta_4471 phosphopyruvate hydratase; PFAM: Enolase-like; enolase 2813657..2814940 Rhodopseudomonas palustris DX-1 10064849 YP_004108949.1 CDS Rpdx1_2630 NC_014834.1 2815051 2816187 D PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_4470 alcohol dehydrogenase-like protein; alcohol dehydrogenase GroES domain-containing protein 2815051..2816187 Rhodopseudomonas palustris DX-1 10064850 YP_004108950.1 CDS Rpdx1_2631 NC_014834.1 2816273 2817076 D KEGG: lch:Lcho_0484 FkbM family methyltransferase; hypothetical protein 2816273..2817076 Rhodopseudomonas palustris DX-1 10064851 YP_004108951.1 CDS Rpdx1_2632 NC_014834.1 2817169 2817783 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ote:Oter_2195 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA complement(2817169..2817783) Rhodopseudomonas palustris DX-1 10064852 YP_004108952.1 CDS Rpdx1_2633 NC_014834.1 2817876 2819018 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_3236 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 2817876..2819018 Rhodopseudomonas palustris DX-1 10064853 YP_004108953.1 CDS Rpdx1_2634 NC_014834.1 2819183 2819743 D PFAM: NADPH-dependent FMN reductase; KEGG: nha:Nham_1747 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2819183..2819743 Rhodopseudomonas palustris DX-1 10064854 YP_004108954.1 CDS Rpdx1_2635 NC_014834.1 2819832 2820149 D PFAM: Septum formation initiator; KEGG: bja:bll4786 hypothetical protein; septum formation initiator 2819832..2820149 Rhodopseudomonas palustris DX-1 10064855 YP_004108955.1 CDS Rpdx1_2636 NC_014834.1 2820302 2821336 D KEGG: bra:BRADO4087 pyruvate dehydrogenase E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase E1 component subunit alpha 2820302..2821336 Rhodopseudomonas palustris DX-1 10064856 YP_004108956.1 CDS Rpdx1_2637 NC_014834.1 2821395 2822804 D PFAM: Transketolase central region; biotin/lipoyl attachment domain-containing protein; Transketolase domain protein; KEGG: bra:BRADO4086 pyruvate dehydrogenase subunit beta; transketolase central region 2821395..2822804 Rhodopseudomonas palustris DX-1 10064857 YP_004108957.1 CDS Rpdx1_2638 NC_014834.1 2823177 2823473 D KEGG: bbt:BBta_4461 hypothetical protein; hypothetical protein 2823177..2823473 Rhodopseudomonas palustris DX-1 10064858 YP_004108958.1 CDS Rpdx1_2639 NC_014834.1 2823486 2824892 D TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; KEGG: nha:Nham_1751 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 2823486..2824892 Rhodopseudomonas palustris DX-1 10064859 YP_004108959.1 CDS Rpdx1_2640 NC_014834.1 2824972 2826393 D KEGG: bja:bll4778 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; dihydrolipoamide dehydrogenase 2824972..2826393 Rhodopseudomonas palustris DX-1 10064860 YP_004108960.1 CDS Rpdx1_2641 NC_014834.1 2827023 2827844 D KEGG: nha:Nham_1754 Sel1-like; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 2827023..2827844 Rhodopseudomonas palustris DX-1 10064861 YP_004108961.1 CDS Rpdx1_2642 NC_014834.1 2827995 2828786 R KEGG: bja:blr4761 exonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth complement(2827995..2828786) Rhodopseudomonas palustris DX-1 10064862 YP_004108962.1 CDS Rpdx1_2643 NC_014834.1 2828950 2829306 D KEGG: met:M446_3173 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2828950..2829306 Rhodopseudomonas palustris DX-1 10064863 YP_004108963.1 CDS Rpdx1_2644 NC_014834.1 2829470 2830441 D KEGG: pst:PSPTO_2262 hypothetical protein; hypothetical protein 2829470..2830441 Rhodopseudomonas palustris DX-1 10064864 YP_004108964.1 CDS Rpdx1_2645 NC_014834.1 2830595 2831350 D KEGG: pst:PSPTO_2262 hypothetical protein; hypothetical protein 2830595..2831350 Rhodopseudomonas palustris DX-1 10064865 YP_004108965.1 CDS Rpdx1_2646 NC_014834.1 2831379 2832440 R PFAM: neurotransmitter-gated ion-channel ligand-binding; KEGG: fph:Fphi_0374 hypothetical protein; neurotransmitter-gated ion-channel ligand-binding protein complement(2831379..2832440) Rhodopseudomonas palustris DX-1 10064866 YP_004108966.1 CDS Rpdx1_2647 NC_014834.1 2832437 2833450 R KEGG: bja:blr7173 putative methyl accepting chemotaxis protein; putative methyl accepting chemotaxis protein complement(2832437..2833450) Rhodopseudomonas palustris DX-1 10064867 YP_004108967.1 CDS Rpdx1_2648 NC_014834.1 2833681 2834013 R KEGG: nha:Nham_1756 HesB/YadR/YfhF; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein complement(2833681..2834013) Rhodopseudomonas palustris DX-1 10064868 YP_004108968.1 CDS Rpdx1_2649 NC_014834.1 2834133 2835335 D TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bja:bll4758 deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 2834133..2835335 Rhodopseudomonas palustris DX-1 10064869 YP_004108969.1 CDS Rpdx1_2650 NC_014834.1 2835402 2837180 D TIGRFAM: arginyl-tRNA synthetase; KEGG: nha:Nham_1758 arginyl-tRNA synthetase; arginyl-tRNa synthetase 2835402..2837180 Rhodopseudomonas palustris DX-1 10064870 YP_004108970.1 CDS Rpdx1_2651 NC_014834.1 2837283 2838917 D PFAM: Sporulation domain protein; KEGG: bja:bll4755 hypothetical protein; sporulation domain-containing protein 2837283..2838917 Rhodopseudomonas palustris DX-1 10064871 YP_004108971.1 CDS Rpdx1_2652 NC_014834.1 2838965 2839990 D PFAM: glycoside hydrolase family 3 domain protein; KEGG: bja:bll4754 glycosyl hydrolase; glycoside hydrolase family protein 2838965..2839990 Rhodopseudomonas palustris DX-1 10064872 YP_004108972.1 CDS Rpdx1_2653 NC_014834.1 2839987 2840817 D PFAM: chromosome segregation and condensation protein ScpA; KEGG: nwi:Nwi_1804 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 2839987..2840817 Rhodopseudomonas palustris DX-1 10064873 YP_004108973.1 CDS Rpdx1_2654 NC_014834.1 2840838 2842121 D KEGG: bbt:BBta_4418 condensin subunit ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; chromosome segregation and condensation protein ScpB 2840838..2842121 Rhodopseudomonas palustris DX-1 10064874 YP_004108974.1 CDS Rpdx1_2655 NC_014834.1 2842272 2842508 D KEGG: bbt:BBta_4417 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein subunit TatA/E 2842272..2842508 Rhodopseudomonas palustris DX-1 10064875 YP_004108975.1 CDS Rpdx1_2656 NC_014834.1 2842692 2843258 D manually curated; TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: bja:bll4750 putative sec-independent protein translocase protein; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein subunit TatB 2842692..2843258 Rhodopseudomonas palustris DX-1 10064876 YP_004108976.1 CDS Rpdx1_2657 NC_014834.1 2843255 2844064 D KEGG: bja:bll4749 sec-independent protein translocase protein; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC 2843255..2844064 Rhodopseudomonas palustris DX-1 10064877 YP_004108977.1 CDS Rpdx1_2658 NC_014834.1 2844208 2847270 D KEGG: mrd:Mrad2831_1933 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; outer membrane autotransporter barrel domain-containing protein 2844208..2847270 Rhodopseudomonas palustris DX-1 10064878 YP_004108978.1 CDS Rpdx1_2659 NC_014834.1 2847381 2848871 D TIGRFAM: seryl-tRNA synthetase; KEGG: nha:Nham_1791 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase 2847381..2848871 Rhodopseudomonas palustris DX-1 10064879 YP_004108979.1 CDS Rpdx1_2660 NC_014834.1 2848969 2850564 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mpt:Mpe_A0536 putative cytidine deaminase; zinc-binding CMP/dCMP deaminase protein 2848969..2850564 Rhodopseudomonas palustris DX-1 10064880 YP_004108980.1 CDS Rpdx1_2661 NC_014834.1 2850789 2851370 D PFAM: SCP-like extracellular; KEGG: bbt:BBta_6058 hypothetical protein; hypothetical protein 2850789..2851370 Rhodopseudomonas palustris DX-1 10064881 YP_004108981.1 CDS Rpdx1_2662 NC_014834.1 2851467 2852234 D KEGG: bbt:BBta_4412 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 2851467..2852234 Rhodopseudomonas palustris DX-1 10064882 YP_004108982.1 CDS Rpdx1_2663 NC_014834.1 2852293 2852667 R KEGG: bbt:BBta_4411 putative response regulator receiver (CheY-like protein); PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver complement(2852293..2852667) Rhodopseudomonas palustris DX-1 10064883 YP_004108983.1 CDS Rpdx1_2664 NC_014834.1 2852894 2853547 D TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: bja:bll474 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 2852894..2853547 Rhodopseudomonas palustris DX-1 10064884 YP_004108984.1 CDS Rpdx1_2665 NC_014834.1 2853668 2855107 D KEGG: nha:Nham_1795 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidase M23 2853668..2855107 Rhodopseudomonas palustris DX-1 10064885 YP_004108985.1 CDS Rpdx1_2666 NC_014834.1 2855435 2857171 R PFAM: porin; KEGG: oca:OCAR_5916 hypothetical protein; porin complement(2855435..2857171) Rhodopseudomonas palustris DX-1 10064886 YP_004108986.1 CDS Rpdx1_2667 NC_014834.1 2857321 2858310 R PFAM: protein of unknown function DUF815; KEGG: bra:BRADO4038 putative ATPase family protein; hypothetical protein complement(2857321..2858310) Rhodopseudomonas palustris DX-1 10064887 YP_004108987.1 CDS Rpdx1_2668 NC_014834.1 2858501 2858938 D KEGG: bra:BRADO4036 preprotein translocase (YajC); TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC 2858501..2858938 Rhodopseudomonas palustris DX-1 10064888 YP_004108988.1 CDS Rpdx1_2669 NC_014834.1 2858983 2860584 D KEGG: nha:Nham_1799 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD 2858983..2860584 Rhodopseudomonas palustris DX-1 10064889 YP_004108989.1 CDS Rpdx1_2670 NC_014834.1 2860610 2861755 D KEGG: nha:Nham_1800 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF 2860610..2861755 Rhodopseudomonas palustris DX-1 10064890 YP_004108990.1 CDS Rpdx1_2671 NC_014834.1 2861903 2862286 D PFAM: protein of unknown function DUF498; KEGG: bbt:BBta_4404 hypothetical protein; hypothetical protein 2861903..2862286 Rhodopseudomonas palustris DX-1 10064891 YP_004108991.1 CDS Rpdx1_2672 NC_014834.1 2862283 2863155 D PFAM: Squalene/phytoene synthase; KEGG: bra:BRADO4032 putative phytoene synthase (terpenoid synthase); squalene/phytoene synthase 2862283..2863155 Rhodopseudomonas palustris DX-1 10064892 YP_004108992.1 CDS Rpdx1_2673 NC_014834.1 2863287 2864723 R TIGRFAM: gid protein; KEGG: nha:Nham_1804 tRNA (uracil-5-)-methyltransferase Gid; PFAM: glucose-inhibited division protein A; hypothetical protein complement(2863287..2864723) Rhodopseudomonas palustris DX-1 10064893 YP_004108993.1 CDS Rpdx1_2674 NC_014834.1 2864881 2865033 R KEGG: bja:bsr4726 hypothetical protein; hypothetical protein complement(2864881..2865033) Rhodopseudomonas palustris DX-1 10064894 YP_004108994.1 CDS Rpdx1_2675 NC_014834.1 2865533 2866429 R PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: bja:blr4723 hypothetical protein; hypothetical protein complement(2865533..2866429) Rhodopseudomonas palustris DX-1 10064895 YP_004108995.1 CDS Rpdx1_2676 NC_014834.1 2866793 2867197 D KEGG: bbt:BBta_4393 hypothetical protein; hypothetical protein 2866793..2867197 Rhodopseudomonas palustris DX-1 10064896 YP_004108996.1 CDS Rpdx1_2677 NC_014834.1 2867268 2867675 R PFAM: thioesterase superfamily protein; KEGG: pla:Plav_2975 thioesterase superfamily protein; thioesterase superfamily protein complement(2867268..2867675) Rhodopseudomonas palustris DX-1 10064897 YP_004108997.1 CDS Rpdx1_2678 NC_014834.1 2867807 2868097 R KEGG: bja:bsr4721 hypothetical protein; hypothetical protein complement(2867807..2868097) Rhodopseudomonas palustris DX-1 10064898 YP_004108998.1 CDS Rpdx1_2679 NC_014834.1 2868385 2868906 R KEGG: bja:blr4716 hypothetical protein; hypothetical protein complement(2868385..2868906) Rhodopseudomonas palustris DX-1 10064899 YP_004108999.1 CDS Rpdx1_2680 NC_014834.1 2868945 2869721 R PFAM: Ion transport 2 domain protein; KEGG: mch:Mchl_1249 ion transport 2 domain protein; Ion transport 2 domain-containing protein complement(2868945..2869721) Rhodopseudomonas palustris DX-1 10064900 YP_004109000.1 CDS Rpdx1_2681 NC_014834.1 2869757 2870095 D PFAM: protein of unknown function DUF433; KEGG: rmr:Rmar_0293 protein of unknown function DUF433; hypothetical protein 2869757..2870095 Rhodopseudomonas palustris DX-1 10064901 YP_004109001.1 CDS Rpdx1_2682 NC_014834.1 2870098 2870460 D KEGG: app:CAP2UW1_4416 hypothetical protein; hypothetical protein 2870098..2870460 Rhodopseudomonas palustris DX-1 10064902 YP_004109002.1 CDS Rpdx1_2683 NC_014834.1 2870479 2870853 R KEGG: bja:bll5899 hypothetical protein; hypothetical protein complement(2870479..2870853) Rhodopseudomonas palustris DX-1 10064903 YP_004109003.1 CDS Rpdx1_2684 NC_014834.1 2871050 2871277 D PFAM: protein of unknown function DUF433; KEGG: bja:bsl4703 hypothetical protein; hypothetical protein 2871050..2871277 Rhodopseudomonas palustris DX-1 10064904 YP_004109004.1 CDS Rpdx1_2685 NC_014834.1 2871289 2871618 D KEGG: slt:Slit_0676 hypothetical protein; hypothetical protein 2871289..2871618 Rhodopseudomonas palustris DX-1 10064905 YP_004109005.1 CDS Rpdx1_2686 NC_014834.1 2871619 2871828 R KEGG: nhl:Nhal_3480 hypothetical protein; hypothetical protein complement(2871619..2871828) Rhodopseudomonas palustris DX-1 10064906 YP_004109006.1 CDS Rpdx1_2687 NC_014834.1 2871930 2872568 R KEGG: conserved domain-containing protein; hypothetical protein complement(2871930..2872568) Rhodopseudomonas palustris DX-1 10064907 YP_004109007.1 CDS Rpdx1_2688 NC_014834.1 2872584 2875673 R KEGG: bbt:BBta_4379 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A complement(2872584..2875673) Rhodopseudomonas palustris DX-1 10064908 YP_004109008.1 CDS Rpdx1_2689 NC_014834.1 2875914 2876654 R KEGG: nha:Nham_2080 putative outer-membrane protein precursor; hypothetical protein complement(2875914..2876654) Rhodopseudomonas palustris DX-1 10064909 YP_004109009.1 CDS Rpdx1_2690 NC_014834.1 2877182 2877685 D KEGG: nha:Nham_2079 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; ssDNA-binding protein 2877182..2877685 Rhodopseudomonas palustris DX-1 10064910 YP_004109010.1 CDS Rpdx1_2691 NC_014834.1 2877818 2878180 R KEGG: rbi:RB2501_12067 hypothetical protein; hypothetical protein complement(2877818..2878180) Rhodopseudomonas palustris DX-1 10064911 YP_004109011.1 CDS Rpdx1_2692 NC_014834.1 2878177 2879472 R PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bbt:BBta_7487 hypothetical protein; hypothetical protein complement(2878177..2879472) Rhodopseudomonas palustris DX-1 10064912 YP_004109012.1 CDS Rpdx1_2693 NC_014834.1 2879551 2880375 R KEGG: nha:Nham_1845 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; MazG family protein complement(2879551..2880375) Rhodopseudomonas palustris DX-1 10064913 YP_004109013.1 CDS Rpdx1_2694 NC_014834.1 2880492 2881205 D KEGG: bja:blr4495 hypothetical protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; ExsB protein 2880492..2881205 Rhodopseudomonas palustris DX-1 10064914 YP_004109014.1 CDS Rpdx1_2695 NC_014834.1 2881300 2882619 D PFAM: beta-lactamase; KEGG: bja:blr5541 hypothetical protein; beta-lactamase 2881300..2882619 Rhodopseudomonas palustris DX-1 10064915 YP_004109015.1 CDS Rpdx1_2696 NC_014834.1 2882568 2883704 R KEGG: mlo:mll2082 hypothetical protein; hypothetical protein complement(2882568..2883704) Rhodopseudomonas palustris DX-1 10064916 YP_004109016.1 CDS Rpdx1_2697 NC_014834.1 2883860 2884249 R KEGG: bja:bll4496 hypothetical protein; hypothetical protein complement(2883860..2884249) Rhodopseudomonas palustris DX-1 10064917 YP_004109017.1 CDS Rpdx1_2698 NC_014834.1 2884246 2884905 R KEGG: bbt:BBta_4084 nitrile hydratase subunit beta (nitrilase) (NHase); nitrile hydratase complement(2884246..2884905) Rhodopseudomonas palustris DX-1 10064918 YP_004109018.1 CDS Rpdx1_2699 NC_014834.1 2884902 2885534 R TIGRFAM: nitrile hydratase, alpha subunit; KEGG: bbt:BBta_4085 nitrile hydratase subunit alpha (nitrilase) (NHase); PFAM: Nitrile hydratase alpha chain; nitrile hydratase subunit alpha complement(2884902..2885534) Rhodopseudomonas palustris DX-1 10064919 YP_004109019.1 CDS Rpdx1_2700 NC_014834.1 2885627 2886433 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_1123 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2885627..2886433 Rhodopseudomonas palustris DX-1 10064920 YP_004109020.1 CDS Rpdx1_2701 NC_014834.1 2886489 2886812 D PFAM: Putative mono-oxygenase ydhR; KEGG: gvi:gll2745 hypothetical protein; Putative mono-oxygenase ydhR 2886489..2886812 Rhodopseudomonas palustris DX-1 10064921 YP_004109021.1 CDS Rpdx1_2702 NC_014834.1 2886819 2888882 R PFAM: UvrD/REP helicase; KEGG: nha:Nham_3768 UvrD/REP helicase; UvrD/REP helicase complement(2886819..2888882) Rhodopseudomonas palustris DX-1 10064922 YP_004109022.1 CDS Rpdx1_2703 NC_014834.1 2889134 2889631 D PFAM: Collagen triple helix repeat; KEGG: mno:Mnod_4914 collagen triple helix repeat protein; collagen triple helix repeat 2889134..2889631 Rhodopseudomonas palustris DX-1 10064923 YP_004109023.1 CDS Rpdx1_2704 NC_014834.1 2889904 2890683 D KEGG: sus:Acid_7087 beta-lactamase; hypothetical protein 2889904..2890683 Rhodopseudomonas palustris DX-1 10064924 YP_004109024.1 CDS Rpdx1_2705 NC_014834.1 2890736 2891602 R TIGRFAM: pyridoxal kinase; KEGG: rru:Rru_A1145 pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; pyridoxal kinase complement(2890736..2891602) Rhodopseudomonas palustris DX-1 10064925 YP_004109025.1 CDS Rpdx1_2706 NC_014834.1 2891599 2892831 R KEGG: rru:Rru_A1144 benzoate membrane transport protein; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; benzoate transporter complement(2891599..2892831) Rhodopseudomonas palustris DX-1 10064926 YP_004109026.1 CDS Rpdx1_2707 NC_014834.1 2892939 2894429 D KEGG: rru:Rru_A1143 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2892939..2894429 Rhodopseudomonas palustris DX-1 10064927 YP_004109027.1 CDS Rpdx1_2708 NC_014834.1 2894575 2895879 D KEGG: rru:Rru_A1142 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 2894575..2895879 Rhodopseudomonas palustris DX-1 10064928 YP_004109028.1 CDS Rpdx1_2709 NC_014834.1 2895900 2896679 D PFAM: alanine racemase domain protein; KEGG: rru:Rru_A1141 hypothetical protein; alanine racemase domain-containing protein 2895900..2896679 Rhodopseudomonas palustris DX-1 10064929 YP_004109029.1 CDS Rpdx1_2710 NC_014834.1 2896697 2897074 R KEGG: rhi:NGR_c29730 pH adaptation potassium efflux system protein G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG complement(2896697..2897074) Rhodopseudomonas palustris DX-1 10064930 YP_004109030.1 CDS Rpdx1_2711 NC_014834.1 2897071 2897352 R PFAM: multiple resistance and pH regulation protein F; KEGG: atc:AGR_C_896 multicomponent K+:H+ antiporter subunit F; multiple resistance and pH regulation protein F complement(2897071..2897352) Rhodopseudomonas palustris DX-1 10064931 YP_004109031.1 CDS Rpdx1_2712 NC_014834.1 2897349 2897837 R PFAM: cation antiporter; KEGG: nha:Nham_1007 putative monovalent cation/H+ antiporter subunit E; cation antiporter complement(2897349..2897837) Rhodopseudomonas palustris DX-1 10064932 YP_004109032.1 CDS Rpdx1_2713 NC_014834.1 2897834 2899468 R KEGG: nha:Nham_1008 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) complement(2897834..2899468) Rhodopseudomonas palustris DX-1 10064933 YP_004109033.1 CDS Rpdx1_2714 NC_014834.1 2899465 2899806 R PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: oca:OCAR_5198 putative monovalent cation/H+ antiporter subunit C; NADH-ubiquinone oxidoreductase subunit 4L complement(2899465..2899806) Rhodopseudomonas palustris DX-1 10064934 YP_004109034.1 CDS Rpdx1_2715 NC_014834.1 2899797 2902724 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; Na+/H+ antiporter MnhB subunit-related protein; KEGG: nha:Nham_1010 putative monovalent cation/H+ antiporter subunit A; NADH/ubiquinone/plastoquinone complement(2899797..2902724) Rhodopseudomonas palustris DX-1 10064935 YP_004109035.1 CDS Rpdx1_2716 NC_014834.1 2902953 2906405 R KEGG: nha:Nham_2830 hypothetical protein; hypothetical protein complement(2902953..2906405) Rhodopseudomonas palustris DX-1 10064936 YP_004109036.1 CDS Rpdx1_2717 NC_014834.1 2906402 2907625 R PFAM: metallophosphoesterase; KEGG: nha:Nham_2831 metallophosphoesterase; metallophosphoesterase complement(2906402..2907625) Rhodopseudomonas palustris DX-1 10064937 YP_004109037.1 CDS Rpdx1_2719 NC_014834.1 2908708 2909304 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ajs:Ajs_3697 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) complement(2908708..2909304) Rhodopseudomonas palustris DX-1 10064939 YP_004109038.1 CDS Rpdx1_2720 NC_014834.1 2909948 2910967 D KEGG: bja:blr4511 ABC transporter substrate-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; TRAP dicarboxylate transporter subunit DctP 2909948..2910967 Rhodopseudomonas palustris DX-1 10064940 YP_004109039.1 CDS Rpdx1_2721 NC_014834.1 2910980 2912863 D PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bbt:BBta_4095 TRAP-type C4-dicarboxylate transporter small and large permease; TRAP C4-dicarboxylate transporter permease DctM 2910980..2912863 Rhodopseudomonas palustris DX-1 10064941 YP_004109040.1 CDS Rpdx1_2722 NC_014834.1 2912918 2914567 D PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_4096 acyl-CoA synthetase; AMP-dependent synthetase and ligase 2912918..2914567 Rhodopseudomonas palustris DX-1 10064942 YP_004109041.1 CDS Rpdx1_2723 NC_014834.1 2914744 2915547 R KEGG: nha:Nham_2006 hypothetical protein; hypothetical protein complement(2914744..2915547) Rhodopseudomonas palustris DX-1 10064943 YP_004109042.1 CDS Rpdx1_2724 NC_014834.1 2915573 2916367 R KEGG: nwi:Nwi_1461 TatD-related deoxyribonuclease; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; hydrolase complement(2915573..2916367) Rhodopseudomonas palustris DX-1 10064944 YP_004109043.1 CDS Rpdx1_2725 NC_014834.1 2916367 2917911 R KEGG: bja:bll4516 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); methionyl-tRNA synthetase complement(2916367..2917911) Rhodopseudomonas palustris DX-1 10064945 YP_004109044.1 CDS Rpdx1_2726 NC_014834.1 2917992 2919047 R KEGG: bbt:BBta_4101 DNA polymerase III subunit delta'; DNA polymerase III subunit delta' complement(2917992..2919047) Rhodopseudomonas palustris DX-1 10064946 YP_004109045.1 CDS Rpdx1_2727 NC_014834.1 2919044 2919736 R TIGRFAM: thymidylate kinase; KEGG: bja:bll4518 thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase complement(2919044..2919736) Rhodopseudomonas palustris DX-1 10064947 YP_004109046.1 CDS Rpdx1_2728 NC_014834.1 2919739 2920980 R KEGG: bbt:BBta_4103 putative serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase complement(2919739..2920980) Rhodopseudomonas palustris DX-1 10064948 YP_004109047.1 CDS Rpdx1_2729 NC_014834.1 2921127 2922074 D PFAM: alpha/beta hydrolase fold; KEGG: bja:blr4520 epoxide hydrolase; alpha/beta hydrolase fold protein 2921127..2922074 Rhodopseudomonas palustris DX-1 10064949 YP_004109048.1 CDS Rpdx1_2730 NC_014834.1 2922119 2923042 R KEGG: nha:Nham_2012 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; rare lipoprotein A complement(2922119..2923042) Rhodopseudomonas palustris DX-1 10064950 YP_004109049.1 CDS Rpdx1_2731 NC_014834.1 2923326 2924474 D PFAM: protein of unknown function UPF0118; KEGG: bbt:BBta_4585 putative transport protein/permease; hypothetical protein 2923326..2924474 Rhodopseudomonas palustris DX-1 10064951 YP_004109050.1 CDS Rpdx1_2732 NC_014834.1 2924458 2924760 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bbt:BBta_4588 hypothetical protein; antibiotic biosynthesis monooxygenase complement(2924458..2924760) Rhodopseudomonas palustris DX-1 10064952 YP_004109051.1 CDS Rpdx1_2733 NC_014834.1 2924837 2926072 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:bll4961 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(2924837..2926072) Rhodopseudomonas palustris DX-1 10064953 YP_004109052.1 CDS Rpdx1_2734 NC_014834.1 2926366 2927736 R KEGG: rle:RL2002 putative transposase-related protein; manually curated; PFAM: transposase IS4 family protein; transposase IS4 family protein complement(2926366..2927736) Rhodopseudomonas palustris DX-1 10064954 YP_004109053.1 CDS Rpdx1_2735 NC_014834.1 2927840 2928322 R PFAM: ribosomal protein S9; KEGG: bbt:BBta_4591 30S ribosomal protein S9; 30S ribosomal protein S9 complement(2927840..2928322) Rhodopseudomonas palustris DX-1 10064955 YP_004109054.1 CDS Rpdx1_2736 NC_014834.1 2928324 2928788 R KEGG: nha:Nham_2455 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; 50S ribosomal protein L13 complement(2928324..2928788) Rhodopseudomonas palustris DX-1 10064956 YP_004109055.1 CDS Rpdx1_2737 NC_014834.1 2928944 2929372 R PFAM: thioesterase superfamily protein; KEGG: bja:bll4964 hypothetical protein; thioesterase superfamily protein complement(2928944..2929372) Rhodopseudomonas palustris DX-1 10064957 YP_004109056.1 CDS Rpdx1_2738 NC_014834.1 2929463 2930290 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr4965 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2929463..2930290 Rhodopseudomonas palustris DX-1 10064958 YP_004109057.1 CDS Rpdx1_2739 NC_014834.1 2930425 2931009 D KEGG: bja:blr4966 hypothetical protein; hypothetical protein 2930425..2931009 Rhodopseudomonas palustris DX-1 10064959 YP_004109058.1 CDS Rpdx1_2740 NC_014834.1 2931103 2932383 D TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bja:blr4967 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 2931103..2932383 Rhodopseudomonas palustris DX-1 10064960 YP_004109059.1 CDS Rpdx1_2741 NC_014834.1 2932423 2932998 D PFAM: protein of unknown function DUF1211; KEGG: bra:BRADO3012 hypothetical protein; hypothetical protein 2932423..2932998 Rhodopseudomonas palustris DX-1 10064961 YP_004109060.1 CDS Rpdx1_2743 NC_014834.1 2933332 2934411 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pzu:PHZ_c1556 threonine dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(2933332..2934411) Rhodopseudomonas palustris DX-1 10064963 YP_004109061.1 CDS Rpdx1_2744 NC_014834.1 2934408 2935205 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_0924 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR complement(2934408..2935205) Rhodopseudomonas palustris DX-1 10064964 YP_004109062.1 CDS Rpdx1_2745 NC_014834.1 2935289 2937028 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: mjl:Mjls_2332 thiamine pyrophosphate binding domain-containing protein; thiamine pyrophosphate domain-containing TPP-binding protein 2935289..2937028 Rhodopseudomonas palustris DX-1 10064965 YP_004109063.1 CDS Rpdx1_2746 NC_014834.1 2937030 2937707 D PFAM: regulatory protein TetR; KEGG: cyn:Cyan7425_2726 transcriptional regulator, TetR family; regulatory protein TetR 2937030..2937707 Rhodopseudomonas palustris DX-1 10064966 YP_004109064.1 CDS Rpdx1_2747 NC_014834.1 2937721 2938833 R PFAM: cytochrome oxidase assembly; KEGG: bja:bll4968 cytochrome oxidase assembly factor; cytochrome oxidase assembly complement(2937721..2938833) Rhodopseudomonas palustris DX-1 10064967 YP_004109065.1 CDS Rpdx1_2748 NC_014834.1 2938930 2939142 D KEGG: bra:BRADO4226 hypothetical protein; hypothetical protein 2938930..2939142 Rhodopseudomonas palustris DX-1 10064968 YP_004109066.1 CDS Rpdx1_2749 NC_014834.1 2939221 2940108 R KEGG: bra:BRADO1425 putative signal peptide; hypothetical protein complement(2939221..2940108) Rhodopseudomonas palustris DX-1 10064969 YP_004109067.1 CDS Rpdx1_2750 NC_014834.1 2940503 2940985 D PFAM: Ferritin Dps family protein; KEGG: eba:ebA1978 DNA-binding ferritin-like protein (oxidative damage protectant); ferritin Dps family protein 2940503..2940985 Rhodopseudomonas palustris DX-1 10064970 YP_004109068.1 CDS Rpdx1_2751 NC_014834.1 2941275 2942276 D KEGG: mag:amb2822 cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 2941275..2942276 Rhodopseudomonas palustris DX-1 10064971 YP_004109069.1 CDS Rpdx1_2752 NC_014834.1 2942362 2943507 D PFAM: NapC/NirT cytochrome c domain protein; KEGG: rru:Rru_A1283 membrane-bound tetrahaem cytochrome TorC/YecK; NapC/NirT cytochrome c domain-containing protein 2942362..2943507 Rhodopseudomonas palustris DX-1 10064972 YP_004109070.1 CDS Rpdx1_2753 NC_014834.1 2943522 2944565 R PFAM: polysaccharide deacetylase; KEGG: bra:BRADO4227 putative polysaccharide deacetylase; polysaccharide deacetylase complement(2943522..2944565) Rhodopseudomonas palustris DX-1 10064973 YP_004109071.1 CDS Rpdx1_2754 NC_014834.1 2944693 2945886 D KEGG: bbt:BBta_4604 hypothetical protein; hypothetical protein 2944693..2945886 Rhodopseudomonas palustris DX-1 10064974 YP_004109072.1 CDS Rpdx1_2755 NC_014834.1 2945966 2948329 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: bbt:BBta_4605 polysaccharide biosynthesis transporter; lipopolysaccharide biosynthesis protein complement(2945966..2948329) Rhodopseudomonas palustris DX-1 10064975 YP_004109073.1 CDS Rpdx1_2756 NC_014834.1 2948598 2949737 D PFAM: glycosyl transferase group 1; KEGG: nwi:Nwi_1413 glycosyl transferase, group 1; glycosyl transferase group 1 protein 2948598..2949737 Rhodopseudomonas palustris DX-1 10064976 YP_004109074.1 CDS Rpdx1_2757 NC_014834.1 2949851 2951410 D KEGG: bra:BRADO4231 putative sugar transferase family protein; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; undecaprenyl-phosphate glucose phosphotransferase 2949851..2951410 Rhodopseudomonas palustris DX-1 10064977 YP_004109075.1 CDS Rpdx1_2758 NC_014834.1 2951569 2952351 R PFAM: protein of unknown function DUF169; KEGG: bja:bll4979 hypothetical protein; hypothetical protein complement(2951569..2952351) Rhodopseudomonas palustris DX-1 10064978 YP_004109076.1 CDS Rpdx1_2759 NC_014834.1 2952571 2952888 D KEGG: bcv:Bcav_1078 protein of unknown function DUF418; hypothetical protein 2952571..2952888 Rhodopseudomonas palustris DX-1 10064979 YP_004109077.1 CDS Rpdx1_2760 NC_014834.1 2953003 2953440 R KEGG: bbt:BBta_7560 hypothetical protein; hypothetical protein complement(2953003..2953440) Rhodopseudomonas palustris DX-1 10064980 YP_004109078.1 CDS Rpdx1_2761 NC_014834.1 2954034 2954786 R KEGG: bja:bll5018 hypothetical protein; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator complement(2954034..2954786) Rhodopseudomonas palustris DX-1 10064982 YP_004109079.1 CDS Rpdx1_2762 NC_014834.1 2954801 2955157 R TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: nwi:Nwi_1408 integration host factor subunit alpha; SMART: histone family protein DNA-binding protein; integration host factor subunit alpha complement(2954801..2955157) Rhodopseudomonas palustris DX-1 10064983 YP_004109080.1 CDS Rpdx1_2763 NC_014834.1 2955300 2956277 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: nha:Nham_1586 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(2955300..2956277) Rhodopseudomonas palustris DX-1 10064984 YP_004109081.1 CDS Rpdx1_2764 NC_014834.1 2956274 2957335 R KEGG: nha:Nham_1585 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; fatty acid/phospholipid synthesis protein PlsX complement(2956274..2957335) Rhodopseudomonas palustris DX-1 10064985 YP_004109082.1 CDS Rpdx1_2765 NC_014834.1 2957582 2958145 R PFAM: protein of unknown function DUF177; KEGG: nha:Nham_1584 hypothetical protein; hypothetical protein complement(2957582..2958145) Rhodopseudomonas palustris DX-1 10064986 YP_004109083.1 CDS Rpdx1_2766 NC_014834.1 2958164 2958700 R PFAM: Ubiquinol-cytochrome c chaperone/UPF0174; KEGG: nha:Nham_1583 ubiquinol-cytochrome c chaperone; Ubiquinol-cytochrome c chaperone complement(2958164..2958700) Rhodopseudomonas palustris DX-1 10064987 YP_004109084.1 CDS Rpdx1_2767 NC_014834.1 2958809 2959294 D PFAM: SmpA/OmlA domain protein; KEGG: bja:blr5024 hypothetical protein; SmpA/OmlA domain-containing protein 2958809..2959294 Rhodopseudomonas palustris DX-1 10064988 YP_004109085.1 CDS Rpdx1_2768 NC_014834.1 2959377 2960240 R PFAM: alpha/beta hydrolase fold; KEGG: noc:Noc_0991 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2959377..2960240) Rhodopseudomonas palustris DX-1 10064989 YP_004109086.1 CDS Rpdx1_2769 NC_014834.1 2960278 2960436 R KEGG: bbt:BBta_7678 hypothetical protein; hypothetical protein complement(2960278..2960436) Rhodopseudomonas palustris DX-1 10064990 YP_004109087.1 CDS Rpdx1_2771 NC_014834.1 2961902 2962609 D KEGG: hmu:Hmuk_1635 methyl-accepting chemotaxis sensory transducer; hypothetical protein 2961902..2962609 Rhodopseudomonas palustris DX-1 10064992 YP_004109088.1 CDS Rpdx1_2772 NC_014834.1 2962845 2964965 R TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: oca:OCAR_5867 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; V-type H(+)-translocating pyrophosphatase complement(2962845..2964965) Rhodopseudomonas palustris DX-1 10064993 YP_004109089.1 CDS Rpdx1_2773 NC_014834.1 2965196 2966167 R TIGRFAM: thiamine-monophosphate kinase; KEGG: nha:Nham_1820 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase complement(2965196..2966167) Rhodopseudomonas palustris DX-1 10064994 YP_004109090.1 CDS Rpdx1_2774 NC_014834.1 2966393 2966914 R KEGG: bja:bll5028 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor complement(2966393..2966914) Rhodopseudomonas palustris DX-1 10064995 YP_004109091.1 CDS Rpdx1_2775 NC_014834.1 2966920 2967411 R TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: nha:Nham_1818 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(2966920..2967411) Rhodopseudomonas palustris DX-1 10064996 YP_004109092.1 CDS Rpdx1_2776 NC_014834.1 2967627 2968235 R TIGRFAM: riboflavin synthase, alpha subunit; KEGG: bja:bll5030 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha complement(2967627..2968235) Rhodopseudomonas palustris DX-1 10064997 YP_004109093.1 CDS Rpdx1_2777 NC_014834.1 2968246 2969415 R TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: bja:bll5031 riboflavin biosynthesis protein; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD complement(2968246..2969415) Rhodopseudomonas palustris DX-1 10064998 YP_004109094.1 CDS Rpdx1_2778 NC_014834.1 2969412 2969894 R PFAM: ATP-cone domain protein; KEGG: nha:Nham_1815 transcriptional regulator NrdR; ATP-cone domain-containing protein complement(2969412..2969894) Rhodopseudomonas palustris DX-1 10064999 YP_004109095.1 CDS Rpdx1_2779 NC_014834.1 2970040 2971338 R KEGG: bja:bll5033 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase complement(2970040..2971338) Rhodopseudomonas palustris DX-1 10065000 YP_004109096.1 CDS Rpdx1_2780 NC_014834.1 2971589 2971843 D PFAM: Rv0623 family protein transcription factor; KEGG: mno:Mnod_8286 Rv0623 family protein transcription factor; protein transcription factor 2971589..2971843 Rhodopseudomonas palustris DX-1 10065001 YP_004109097.1 CDS Rpdx1_2781 NC_014834.1 2971843 2972223 D PFAM: PilT protein domain protein; KEGG: mno:Mnod_8285 PilT protein domain protein; PilT domain-containing protein 2971843..2972223 Rhodopseudomonas palustris DX-1 10065002 YP_004109098.1 CDS Rpdx1_2782 NC_014834.1 2972406 2972771 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: pzu:PHZ_c2830 hypothetical protein; cupin 2972406..2972771 Rhodopseudomonas palustris DX-1 10065003 YP_004109099.1 CDS Rpdx1_2783 NC_014834.1 2972957 2973163 R KEGG: hba:Hbal_0687 hypothetical protein; hypothetical protein complement(2972957..2973163) Rhodopseudomonas palustris DX-1 10065004 YP_004109100.1 CDS Rpdx1_2784 NC_014834.1 2973437 2974315 D PFAM: Glutathione S-transferase domain; KEGG: nha:Nham_2099 putative glutathione S-transferase YghU; glutathione S-transferase domain-containing protein 2973437..2974315 Rhodopseudomonas palustris DX-1 10065005 YP_004109101.1 CDS Rpdx1_2785 NC_014834.1 2974507 2974929 R PFAM: globin; KEGG: bbt:BBta_6298 hypothetical protein; globin complement(2974507..2974929) Rhodopseudomonas palustris DX-1 10065006 YP_004109102.1 CDS Rpdx1_2786 NC_014834.1 2974990 2975562 R KEGG: msl:Msil_2979 hypothetical protein; hypothetical protein complement(2974990..2975562) Rhodopseudomonas palustris DX-1 10065007 YP_004109103.1 CDS Rpdx1_2787 NC_014834.1 2975578 2975793 R KEGG: bja:bsl5034 hypothetical protein; hypothetical protein complement(2975578..2975793) Rhodopseudomonas palustris DX-1 10065008 YP_004109104.1 CDS Rpdx1_2788 NC_014834.1 2975810 2976037 R KEGG: bja:bsl5035 hypothetical protein; hypothetical protein complement(2975810..2976037) Rhodopseudomonas palustris DX-1 10065009 YP_004109105.1 CDS Rpdx1_2789 NC_014834.1 2976253 2976771 R KEGG: bbt:BBta_4653 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(2976253..2976771) Rhodopseudomonas palustris DX-1 10065010 YP_004109106.1 CDS Rpdx1_2790 NC_014834.1 2977125 2978690 R PFAM: AMP-dependent synthetase and ligase; KEGG: rer:RER_13820 acyl-CoA synthetase; AMP-dependent synthetase and ligase complement(2977125..2978690) Rhodopseudomonas palustris DX-1 10065011 YP_004109107.1 CDS Rpdx1_2791 NC_014834.1 2978764 2979228 R KEGG: bra:BRADO4435 hypothetical protein; hypothetical protein complement(2978764..2979228) Rhodopseudomonas palustris DX-1 10065012 YP_004109108.1 CDS Rpdx1_2792 NC_014834.1 2979414 2980466 D KEGG: bra:BRADO4436 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; porphobilinogen synthase 2979414..2980466 Rhodopseudomonas palustris DX-1 10065013 YP_004109109.1 CDS Rpdx1_2793 NC_014834.1 2980631 2981161 D PFAM: RDD domain containing protein; KEGG: nha:Nham_2241 hypothetical protein; RDD domain-containing protein 2980631..2981161 Rhodopseudomonas palustris DX-1 10065014 YP_004109110.1 CDS Rpdx1_2794 NC_014834.1 2981230 2982006 D PFAM: Arginine-tRNA-protein transferase domain protein; KEGG: bja:blr5039 arginyl-tRNA-protein transferase; arginine-tRNa-protein transferase domain-containing protein 2981230..2982006 Rhodopseudomonas palustris DX-1 10065015 YP_004109111.1 CDS Rpdx1_2795 NC_014834.1 2982098 2982994 R PFAM: secretion protein HlyD family protein; KEGG: rce:RC1_2575 HlyD family secretion protein; secretion protein HlyD family protein complement(2982098..2982994) Rhodopseudomonas palustris DX-1 10065016 YP_004109112.1 CDS Rpdx1_2796 NC_014834.1 2982991 2983206 R PFAM: protein of unknown function DUF1656; KEGG: rce:RC1_2576 hypothetical protein; hypothetical protein complement(2982991..2983206) Rhodopseudomonas palustris DX-1 10065017 YP_004109113.1 CDS Rpdx1_2797 NC_014834.1 2983196 2985307 R PFAM: Fusaric acid resistance protein conserved region; KEGG: rce:RC1_2577 fusaric acid resistance protein, putative; fusaric acid resistance protein complement(2983196..2985307) Rhodopseudomonas palustris DX-1 10065018 YP_004109114.1 CDS Rpdx1_2798 NC_014834.1 2985394 2986218 D KEGG: rce:RC1_2578 transcriptional regulator, AraC family protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2985394..2986218 Rhodopseudomonas palustris DX-1 10065019 YP_004109115.1 CDS Rpdx1_2799 NC_014834.1 2986276 2987649 R manually curated; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; KEGG: oca:OCAR_5850 manganese transport protein MntH; PFAM: natural resistance-associated macrophage protein; NRAMP family Mn2+/Fe2+ transporter complement(2986276..2987649) Rhodopseudomonas palustris DX-1 10065020 YP_004109116.1 CDS Rpdx1_2800 NC_014834.1 2987901 2988098 D KEGG: cre:CHLREDRAFT_166702 hypothetical protein; hypothetical protein 2987901..2988098 Rhodopseudomonas palustris DX-1 10065021 YP_004109117.1 CDS Rpdx1_2801 NC_014834.1 2988167 2989594 R PFAM: Citrate transporter; KEGG: bja:bll7122 hypothetical protein; citrate transporter complement(2988167..2989594) Rhodopseudomonas palustris DX-1 10065022 YP_004109118.1 CDS Rpdx1_2802 NC_014834.1 2989684 2991945 R SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: bja:bll5057 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA topoisomerase IV subunit A complement(2989684..2991945) Rhodopseudomonas palustris DX-1 10065023 YP_004109119.1 CDS Rpdx1_2803 NC_014834.1 2991955 2992467 R PFAM: helix-turn-helix HxlR type; KEGG: mrd:Mrad2831_0163 HxlR family transcriptional regulator; HxlR family transcriptional regulator complement(2991955..2992467) Rhodopseudomonas palustris DX-1 10065024 YP_004109120.1 CDS Rpdx1_2804 NC_014834.1 2992548 2993423 D PFAM: Male sterility domain; KEGG: pna:Pnap_0622 NmrA family protein; male sterility domain 2992548..2993423 Rhodopseudomonas palustris DX-1 10065025 YP_004109121.1 CDS Rpdx1_2805 NC_014834.1 2993456 2994049 R PFAM: regulatory protein TetR; KEGG: tcu:Tcur_2560 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2993456..2994049) Rhodopseudomonas palustris DX-1 10065026 YP_004109122.1 CDS Rpdx1_2806 NC_014834.1 2994179 2994823 D PFAM: Glutathione S-transferase domain; KEGG: reh:H16_A0176 glutathione S-transferase; glutathione S-transferase domain-containing protein 2994179..2994823 Rhodopseudomonas palustris DX-1 10065027 YP_004109123.1 CDS Rpdx1_2807 NC_014834.1 2994838 2995590 R KEGG: nha:Nham_2248 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; DNA repair protein RecO complement(2994838..2995590) Rhodopseudomonas palustris DX-1 10065028 YP_004109124.1 CDS Rpdx1_2808 NC_014834.1 2995643 2996044 R KEGG: bja:bll5059 hypothetical protein; hypothetical protein complement(2995643..2996044) Rhodopseudomonas palustris DX-1 10065029 YP_004109125.1 CDS Rpdx1_2809 NC_014834.1 2996041 2996967 R KEGG: nha:Nham_2250 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; GTP-binding protein Era complement(2996041..2996967) Rhodopseudomonas palustris DX-1 10065030 YP_004109126.1 CDS Rpdx1_2810 NC_014834.1 2996957 2997775 R SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: bra:BRADO4463 ribonuclease III (modular protein); PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III complement(2996957..2997775) Rhodopseudomonas palustris DX-1 10065031 YP_004109127.1 CDS Rpdx1_2811 NC_014834.1 2997772 2998530 R TIGRFAM: signal peptidase I; KEGG: nwi:Nwi_1919 peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I complement(2997772..2998530) Rhodopseudomonas palustris DX-1 10065032 YP_004109128.1 CDS Rpdx1_2812 NC_014834.1 2998772 2999212 R KEGG: bra:BRADO4466 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-acyl-carrier-protein synthase complement(2998772..2999212) Rhodopseudomonas palustris DX-1 10065033 YP_004109129.1 CDS Rpdx1_2813 NC_014834.1 2999209 2999973 R TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: bja:bll5064 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; pyridoxal phosphate biosynthetic protein PdxJ complement(2999209..2999973) Rhodopseudomonas palustris DX-1 10065034 YP_004109130.1 CDS Rpdx1_2814 NC_014834.1 3000121 3002403 R SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: bra:BRADO4468 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase); PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein; (p)ppGpp synthetase I SpoT/RelA complement(3000121..3002403) Rhodopseudomonas palustris DX-1 10065035 YP_004109131.1 CDS Rpdx1_2815 NC_014834.1 3002674 3003066 R KEGG: oca:OCAR_5837 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega complement(3002674..3003066) Rhodopseudomonas palustris DX-1 10065036 YP_004109132.1 CDS Rpdx1_2816 NC_014834.1 3003412 3004053 D KEGG: bja:blr5067 hypothetical protein; hypothetical protein 3003412..3004053 Rhodopseudomonas palustris DX-1 10065037 YP_004109133.1 CDS Rpdx1_2817 NC_014834.1 3004058 3004732 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: nha:Nham_2258 uracil-DNA glycosylase superfamily protein; uracil-DNA glycosylase superfamily protein 3004058..3004732 Rhodopseudomonas palustris DX-1 10065038 YP_004109134.1 CDS Rpdx1_2818 NC_014834.1 3004860 3005438 R PFAM: Redoxin domain protein; KEGG: bja:bll5069 BcpB protein; redoxin domain-containing protein complement(3004860..3005438) Rhodopseudomonas palustris DX-1 10065039 YP_004109135.1 CDS Rpdx1_2819 NC_014834.1 3005464 3005937 R KEGG: nha:Nham_2260 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; SsrA-binding protein complement(3005464..3005937) Rhodopseudomonas palustris DX-1 10065040 YP_004109136.1 CDS Rpdx1_2820 NC_014834.1 3005975 3006454 R KEGG: bja:bll5071 mechanosensitive channel-like protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein complement(3005975..3006454) Rhodopseudomonas palustris DX-1 10065041 YP_004109137.1 CDS Rpdx1_2821 NC_014834.1 3006465 3007355 R KEGG: nha:Nham_2262 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase complement(3006465..3007355) Rhodopseudomonas palustris DX-1 10065042 YP_004109138.1 CDS Rpdx1_2822 NC_014834.1 3007487 3007894 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: bra:BRADO3800 hypothetical protein; cupin complement(3007487..3007894) Rhodopseudomonas palustris DX-1 10065043 YP_004109139.1 CDS Rpdx1_2823 NC_014834.1 3007907 3008620 R PFAM: Dimethylmenaquinone methyltransferase; KEGG: bbt:BBta_4131 hypothetical protein; dimethylmenaquinone methyltransferase complement(3007907..3008620) Rhodopseudomonas palustris DX-1 10065044 YP_004109140.1 CDS Rpdx1_2824 NC_014834.1 3008841 3009569 D KEGG: nha:Nham_2040 hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 3008841..3009569 Rhodopseudomonas palustris DX-1 10065045 YP_004109141.1 CDS Rpdx1_2825 NC_014834.1 3009566 3010576 D TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: nha:Nham_2041 allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; urea amidolyase-like protein 3009566..3010576 Rhodopseudomonas palustris DX-1 10065046 YP_004109142.1 CDS Rpdx1_2826 NC_014834.1 3010604 3011368 D PFAM: LamB/YcsF family protein; KEGG: bja:blr4568 LamB/YcsF family protein; LamB/YcsF family protein 3010604..3011368 Rhodopseudomonas palustris DX-1 10065047 YP_004109143.1 CDS Rpdx1_2827 NC_014834.1 3011384 3012235 R manually curated; KEGG: oca:OCAR_6853 probable arylformamidase (kynurenine formamidase) (KF); putative arylformamidase complement(3011384..3012235) Rhodopseudomonas palustris DX-1 10065048 YP_004109144.1 CDS Rpdx1_2828 NC_014834.1 3012232 3013053 R KEGG: mms:mma_3084 sulfonate/nitrate transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3012232..3013053) Rhodopseudomonas palustris DX-1 10065049 YP_004109145.1 CDS Rpdx1_2829 NC_014834.1 3013046 3013933 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mms:mma_3085 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; binding-protein-dependent transporter inner membrane component complement(3013046..3013933) Rhodopseudomonas palustris DX-1 10065050 YP_004109146.1 CDS Rpdx1_2830 NC_014834.1 3013941 3014897 R SMART: extracellular solute-binding protein family 3; KEGG: mms:mma_3086 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component; family 3 extracellular solute-binding protein complement(3013941..3014897) Rhodopseudomonas palustris DX-1 10065051 YP_004109147.1 CDS Rpdx1_2831 NC_014834.1 3014999 3015913 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_1913 LysR family transcriptional regulator; LysR family transcriptional regulator 3014999..3015913 Rhodopseudomonas palustris DX-1 10065052 YP_004109148.1 CDS Rpdx1_2832 NC_014834.1 3016317 3017642 D TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: bra:BRADO3790 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 3016317..3017642 Rhodopseudomonas palustris DX-1 10065053 YP_004109149.1 CDS Rpdx1_2833 NC_014834.1 3017798 3018772 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:bll4583 quinone oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein complement(3017798..3018772) Rhodopseudomonas palustris DX-1 10065054 YP_004109150.1 CDS Rpdx1_2834 NC_014834.1 3018858 3019580 R PFAM: Integral membrane protein TerC; KEGG: bbt:BBta_4147 hypothetical protein; integral membrane protein TerC complement(3018858..3019580) Rhodopseudomonas palustris DX-1 10065055 YP_004109151.1 CDS Rpdx1_2835 NC_014834.1 3019577 3020308 R KEGG: nha:Nham_2046 phosphatidylcholine synthase; PFAM: CDP-alcohol phosphatidyltransferase; phosphatidylcholine synthase complement(3019577..3020308) Rhodopseudomonas palustris DX-1 10065056 YP_004109152.1 CDS Rpdx1_2836 NC_014834.1 3020391 3021638 D KEGG: bja:blr4586 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Ubiquinone biosynthesis hydroxylase 3020391..3021638 Rhodopseudomonas palustris DX-1 10065057 YP_004109153.1 CDS Rpdx1_2837 NC_014834.1 3021644 3022600 R PFAM: Auxin Efflux Carrier; KEGG: bja:bll4587 malonate transporter; auxin efflux carrier complement(3021644..3022600) Rhodopseudomonas palustris DX-1 10065058 YP_004109154.1 CDS Rpdx1_2838 NC_014834.1 3022721 3023053 D KEGG: bja:blr4588 hypothetical protein; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; hemimethylated DNA-binding protein 3022721..3023053 Rhodopseudomonas palustris DX-1 10065059 YP_004109155.1 CDS Rpdx1_2839 NC_014834.1 3023296 3024045 R PFAM: Invasion associated locus B family protein; KEGG: bja:bll4589 hypothetical protein; invasion associated locus B family protein complement(3023296..3024045) Rhodopseudomonas palustris DX-1 10065060 YP_004109156.1 CDS Rpdx1_2840 NC_014834.1 3024262 3026142 D PFAM: extracellular solute-binding protein family 5; KEGG: nwi:Nwi_1510 extracellular solute-binding protein; family 5 extracellular solute-binding protein 3024262..3026142 Rhodopseudomonas palustris DX-1 10065061 YP_004109157.1 CDS Rpdx1_2841 NC_014834.1 3026147 3027682 D PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr4591 hypothetical protein; AMP-dependent synthetase and ligase 3026147..3027682 Rhodopseudomonas palustris DX-1 10065062 YP_004109158.1 CDS Rpdx1_2842 NC_014834.1 3027732 3028964 D KEGG: nha:Nham_2052 hypothetical protein; hypothetical protein 3027732..3028964 Rhodopseudomonas palustris DX-1 10065063 YP_004109159.1 CDS Rpdx1_2843 NC_014834.1 3029317 3032835 R TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: bra:BRADO3771 transcription repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor complement(3029317..3032835) Rhodopseudomonas palustris DX-1 10065064 YP_004109160.1 CDS Rpdx1_2844 NC_014834.1 3032832 3033122 R PFAM: protein of unknown function DUF339; KEGG: bja:bsl4602 hypothetical protein; hypothetical protein complement(3032832..3033122) Rhodopseudomonas palustris DX-1 10065065 YP_004109161.1 CDS Rpdx1_2845 NC_014834.1 3033279 3035381 D KEGG: nha:Nham_2055 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 3033279..3035381 Rhodopseudomonas palustris DX-1 10065066 YP_004109162.1 CDS Rpdx1_2846 NC_014834.1 3035531 3036334 R PFAM: protein of unknown function DUF502; KEGG: nha:Nham_2056 hypothetical protein; hypothetical protein complement(3035531..3036334) Rhodopseudomonas palustris DX-1 10065067 YP_004109163.1 CDS Rpdx1_2847 NC_014834.1 3036545 3038371 R KEGG: bra:BRADO3763 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); glucosamine/fructose-6-phosphate aminotransferase complement(3036545..3038371) Rhodopseudomonas palustris DX-1 10065068 YP_004109164.1 CDS Rpdx1_2848 NC_014834.1 3038498 3039856 R KEGG: nha:Nham_1784 nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; UDP-N-acetylglucosamine pyrophosphorylase complement(3038498..3039856) Rhodopseudomonas palustris DX-1 10065069 YP_004109165.1 CDS Rpdx1_2849 NC_014834.1 3040024 3041547 D PFAM: Sporulation domain protein; KEGG: nha:Nham_1783 hypothetical protein; sporulation domain-containing protein 3040024..3041547 Rhodopseudomonas palustris DX-1 10065070 YP_004109166.1 CDS Rpdx1_2850 NC_014834.1 3041620 3042000 D KEGG: nha:Nham_1782 hypothetical protein; hypothetical protein 3041620..3042000 Rhodopseudomonas palustris DX-1 10065071 YP_004109167.1 CDS Rpdx1_2851 NC_014834.1 3041960 3043570 R KEGG: bra:BRADO3757 putative beta (1-6) glucans synthase, NdvC-like; putative beta (1-6) glucans synthase complement(3041960..3043570) Rhodopseudomonas palustris DX-1 10065072 YP_004109168.1 CDS Rpdx1_2852 NC_014834.1 3043859 3044446 D manually curated; KEGG: nha:Nham_1780 hypothetical protein; hypothetical protein 3043859..3044446 Rhodopseudomonas palustris DX-1 10065073 YP_004109169.1 CDS Rpdx1_2853 NC_014834.1 3044634 3047471 D KEGG: nha:Nham_1779 glycosyl transferase family protein; manually curated; PFAM: glycosyl transferase family 2; glycosyl transferase family 2 protein 3044634..3047471 Rhodopseudomonas palustris DX-1 10065074 YP_004109170.1 CDS Rpdx1_2854 NC_014834.1 3048063 3048206 D PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_3081 light harvesting protein B-800-850; antenna complex subunit alpha/beta 3048063..3048206 Rhodopseudomonas palustris DX-1 10065076 YP_004109171.1 CDS Rpdx1_2855 NC_014834.1 3048232 3048411 D PFAM: antenna complex alpha/beta subunit; KEGG: hha:Hhal_1408 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 3048232..3048411 Rhodopseudomonas palustris DX-1 10065077 YP_004109172.1 CDS Rpdx1_2856 NC_014834.1 3048520 3048723 R KEGG: bbt:BBta_4350 hypothetical protein; hypothetical protein complement(3048520..3048723) Rhodopseudomonas palustris DX-1 10065078 YP_004109173.1 CDS Rpdx1_2857 NC_014834.1 3048814 3049215 R PFAM: Endoribonuclease L-PSP; KEGG: bja:bll4678 hypothetical protein; endoribonuclease L-PSP complement(3048814..3049215) Rhodopseudomonas palustris DX-1 10065079 YP_004109174.1 CDS Rpdx1_2858 NC_014834.1 3049404 3050294 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr4679 hypothetical protein; hypothetical protein 3049404..3050294 Rhodopseudomonas palustris DX-1 10065080 YP_004109175.1 CDS Rpdx1_2859 NC_014834.1 3050291 3050533 R KEGG: nha:Nham_1774 hypothetical protein; hypothetical protein complement(3050291..3050533) Rhodopseudomonas palustris DX-1 10065081 YP_004109176.1 CDS Rpdx1_2860 NC_014834.1 3051038 3051253 D KEGG: bbt:BBta_4362 hypothetical protein; hypothetical protein 3051038..3051253 Rhodopseudomonas palustris DX-1 10065082 YP_004109177.1 CDS Rpdx1_2861 NC_014834.1 3051647 3052021 R KEGG: bfl:Bfl351 threonyl-tRNA synthetase; hypothetical protein complement(3051647..3052021) Rhodopseudomonas palustris DX-1 10065083 YP_004109178.1 CDS Rpdx1_2862 NC_014834.1 3053050 3053445 D PFAM: Camphor resistance CrcB protein; KEGG: bja:bll2639 hypothetical protein; camphor resistance CrcB protein 3053050..3053445 Rhodopseudomonas palustris DX-1 10065084 YP_004109179.1 CDS Rpdx1_2863 NC_014834.1 3053482 3054300 D PFAM: protein of unknown function DUF190; Camphor resistance CrcB protein; KEGG: rsq:Rsph17025_3454 hypothetical protein; hypothetical protein 3053482..3054300 Rhodopseudomonas palustris DX-1 10065085 YP_004109180.1 CDS Rpdx1_2864 NC_014834.1 3054507 3054851 D PFAM: protein of unknown function DUF190; KEGG: bja:bll2637 hypothetical protein; hypothetical protein 3054507..3054851 Rhodopseudomonas palustris DX-1 10065086 YP_004109181.1 CDS Rpdx1_2865 NC_014834.1 3054958 3056091 R TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: bja:bll4683 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(3054958..3056091) Rhodopseudomonas palustris DX-1 10065087 YP_004109182.1 CDS Rpdx1_2866 NC_014834.1 3056088 3057170 R KEGG: nha:Nham_1770 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase complement(3056088..3057170) Rhodopseudomonas palustris DX-1 10065088 YP_004109183.1 CDS Rpdx1_2867 NC_014834.1 3057351 3057818 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bra:BRADO3995 peptidyl prolyl cis-trans isomerase (rotamase B); cyclophilin type peptidyl-prolyl cis-trans isomerase complement(3057351..3057818) Rhodopseudomonas palustris DX-1 10065089 YP_004109184.1 CDS Rpdx1_2868 NC_014834.1 3057794 3058237 R KEGG: nha:Nham_1768 hypothetical protein; hypothetical protein complement(3057794..3058237) Rhodopseudomonas palustris DX-1 10065090 YP_004109185.1 CDS Rpdx1_2869 NC_014834.1 3058247 3058810 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bbt:BBta_4368 peptidyl-prolyl cis-trans isomerase A (rotamase A); cyclophilin type peptidyl-prolyl cis-trans isomerase complement(3058247..3058810) Rhodopseudomonas palustris DX-1 10065091 YP_004109186.1 CDS Rpdx1_2870 NC_014834.1 3058827 3059336 R TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: nha:Nham_1766 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase complement(3058827..3059336) Rhodopseudomonas palustris DX-1 10065092 YP_004109187.1 CDS Rpdx1_2871 NC_014834.1 3059673 3059930 D KEGG: nha:Nham_1765 hypothetical protein; hypothetical protein 3059673..3059930 Rhodopseudomonas palustris DX-1 10065093 YP_004109188.1 CDS Rpdx1_2872 NC_014834.1 3060115 3062856 R SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: bra:BRADO3999 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A complement(3060115..3062856) Rhodopseudomonas palustris DX-1 10065094 YP_004109189.1 CDS Rpdx1_2873 NC_014834.1 3063059 3064429 R KEGG: nha:Nham_1842 GTP-binding protein, HSR1-related; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; GTP-binding proten HflX complement(3063059..3064429) Rhodopseudomonas palustris DX-1 10065095 YP_004109190.1 CDS Rpdx1_2874 NC_014834.1 3064441 3064689 R KEGG: bja:bsr4491 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; RNA chaperone Hfq complement(3064441..3064689) Rhodopseudomonas palustris DX-1 10065096 YP_004109191.1 CDS Rpdx1_2875 NC_014834.1 3064870 3065727 R PFAM: aminotransferase class IV; KEGG: nwi:Nwi_1448 D-amino acid aminotransferase; class IV aminotransferase complement(3064870..3065727) Rhodopseudomonas palustris DX-1 10065097 YP_004109192.1 CDS Rpdx1_2876 NC_014834.1 3065767 3067134 R KEGG: bbt:BBta_4072 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; Fis family two component sigma54 specific transcriptional regulator complement(3065767..3067134) Rhodopseudomonas palustris DX-1 10065098 YP_004109193.1 CDS Rpdx1_2877 NC_014834.1 3067151 3069442 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: oca:OCAR_6097 nitrogen regulation protein NtrY; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(3067151..3069442) Rhodopseudomonas palustris DX-1 10065099 YP_004109194.1 CDS Rpdx1_2878 NC_014834.1 3069606 3071048 R TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: bbt:BBta_4070 nitrogen metabolism transcriptional regulator NtrC; SMART: response regulator receiver; AAA ATPase; Fis family two component sigma54 specific transcriptional regulator complement(3069606..3071048) Rhodopseudomonas palustris DX-1 10065100 YP_004109195.1 CDS Rpdx1_2879 NC_014834.1 3071058 3072230 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bra:BRADO3867 nitrogen regulation protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; nitrogen specific signal transduction histidine kinase NtrB complement(3071058..3072230) Rhodopseudomonas palustris DX-1 10065101 YP_004109196.1 CDS Rpdx1_2880 NC_014834.1 3072227 3073261 R manually curated; TIGRFAM: TIM-barrel protein, nifR3 family; KEGG: bja:blr4486 nitrogen regulation protein; PFAM: dihydrouridine synthase DuS; nifR3 family TIM-barrel protein complement(3072227..3073261) Rhodopseudomonas palustris DX-1 10065102 YP_004109197.1 CDS Rpdx1_2881 NC_014834.1 3073502 3074698 D KEGG: nha:Nham_1834 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3073502..3074698 Rhodopseudomonas palustris DX-1 10065103 YP_004109198.1 CDS Rpdx1_2882 NC_014834.1 3074701 3075321 D PFAM: CinA domain protein; KEGG: nha:Nham_1833 CinA-like; CinA domain-containing protein 3074701..3075321 Rhodopseudomonas palustris DX-1 10065104 YP_004109199.1 CDS Rpdx1_2883 NC_014834.1 3075547 3076020 R PFAM: cyclase/dehydrase; KEGG: nha:Nham_1832 cyclase/dehydrase; cyclase/dehydrase complement(3075547..3076020) Rhodopseudomonas palustris DX-1 10065105 YP_004109200.1 CDS Rpdx1_2884 NC_014834.1 3076047 3077006 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: nwi:Nwi_1439 lipoyl synthase; PFAM: Radical SAM domain protein; lipoic acid synthetase complement(3076047..3077006) Rhodopseudomonas palustris DX-1 10065106 YP_004109201.1 CDS Rpdx1_2885 NC_014834.1 3077155 3077781 D KEGG: nwi:Nwi_1438 3-methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); DNA-3-methyladenine glycosylase 3077155..3077781 Rhodopseudomonas palustris DX-1 10065107 YP_004109202.1 CDS Rpdx1_2886 NC_014834.1 3077935 3078495 R KEGG: gur:Gura_0796 hypothetical protein; hypothetical protein complement(3077935..3078495) Rhodopseudomonas palustris DX-1 10065108 YP_004109203.1 CDS Rpdx1_2887 NC_014834.1 3078662 3081535 R KEGG: nha:Nham_1828 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase complement(3078662..3081535) Rhodopseudomonas palustris DX-1 10065109 YP_004109204.1 CDS Rpdx1_2888 NC_014834.1 3081677 3082429 R PFAM: Protein of unknown function DUF2497; KEGG: bja:blr4474 hypothetical protein; hypothetical protein complement(3081677..3082429) Rhodopseudomonas palustris DX-1 10065110 YP_004109205.1 CDS Rpdx1_2889 NC_014834.1 3082756 3084147 R KEGG: nha:Nham_1826 type I secretion outer membrane protein, TolC; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion membrane fusion protein complement(3082756..3084147) Rhodopseudomonas palustris DX-1 10065111 YP_004109206.1 CDS Rpdx1_2890 NC_014834.1 3084357 3085022 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: nha:Nham_1787 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(3084357..3085022) Rhodopseudomonas palustris DX-1 10065112 YP_004109207.1 CDS Rpdx1_2891 NC_014834.1 3085554 3085916 D KEGG: bra:BRADO3004 putative signal peptide; hypothetical protein 3085554..3085916 Rhodopseudomonas palustris DX-1 10065114 YP_004109208.1 CDS Rpdx1_2892 NC_014834.1 3086106 3086282 D KEGG: bbt:BBta_3938 hypothetical protein; hypothetical protein 3086106..3086282 Rhodopseudomonas palustris DX-1 10065115 YP_004109209.1 CDS Rpdx1_2893 NC_014834.1 3086301 3087434 R KEGG: azl:AZL_019960 alginate O-acetyltransferase; alginate O-acetyltransferase complement(3086301..3087434) Rhodopseudomonas palustris DX-1 10065116 YP_004109210.1 CDS Rpdx1_2894 NC_014834.1 3087437 3088906 R PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: azl:AZL_019970 membrane bound O-acyl transferase; membrane bound O-acyl transferase complement(3087437..3088906) Rhodopseudomonas palustris DX-1 10065117 YP_004109211.1 CDS Rpdx1_2895 NC_014834.1 3089259 3089987 R PFAM: DTW domain containing protein; KEGG: nha:Nham_2062 hypothetical protein; DTW domain-containing protein complement(3089259..3089987) Rhodopseudomonas palustris DX-1 10065119 YP_004109212.1 CDS Rpdx1_2896 NC_014834.1 3089995 3093102 R PFAM: acriflavin resistance protein; KEGG: nha:Nham_2063 acriflavin resistance protein; acriflavin resistance protein complement(3089995..3093102) Rhodopseudomonas palustris DX-1 10065120 YP_004109213.1 CDS Rpdx1_2897 NC_014834.1 3093102 3096236 R PFAM: acriflavin resistance protein; KEGG: bja:blr4457 AcrB/AcrD/AcrF family protein; acriflavin resistance protein complement(3093102..3096236) Rhodopseudomonas palustris DX-1 10065121 YP_004109214.1 CDS Rpdx1_2898 NC_014834.1 3096302 3097666 R KEGG: bbt:BBta_3932 multidrug resistance protein MdtA precursor; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3096302..3097666) Rhodopseudomonas palustris DX-1 10065122 YP_004109215.1 CDS Rpdx1_2899 NC_014834.1 3097656 3099104 R KEGG: nha:Nham_2066 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein complement(3097656..3099104) Rhodopseudomonas palustris DX-1 10065123 YP_004109216.1 CDS Rpdx1_2900 NC_014834.1 3099534 3100847 D PFAM: amine oxidase; KEGG: bbt:BBta_3930 hypothetical protein; amine oxidase 3099534..3100847 Rhodopseudomonas palustris DX-1 10065124 YP_004109217.1 CDS Rpdx1_2901 NC_014834.1 3100850 3101695 D PFAM: protein of unknown function DUF1365; KEGG: bra:BRADO3907 hypothetical protein; hypothetical protein 3100850..3101695 Rhodopseudomonas palustris DX-1 10065125 YP_004109218.1 CDS Rpdx1_2902 NC_014834.1 3101750 3102979 D KEGG: bbt:BBta_3928 putative cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3101750..3102979 Rhodopseudomonas palustris DX-1 10065126 YP_004109219.1 CDS Rpdx1_2903 NC_014834.1 3103091 3104128 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: oca:OCAR_6061 cysteine synthase A; pyridoxal-5'-phosphate-dependent protein subunit beta 3103091..3104128 Rhodopseudomonas palustris DX-1 10065127 YP_004109220.1 CDS Rpdx1_2904 NC_014834.1 3104276 3104545 D KEGG: cai:Caci_7102 hypothetical protein; hypothetical protein 3104276..3104545 Rhodopseudomonas palustris DX-1 10065128 YP_004109221.1 CDS Rpdx1_2905 NC_014834.1 3104788 3105528 R KEGG: bra:BRADO3910 putative amino acid transport protein, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3104788..3105528) Rhodopseudomonas palustris DX-1 10065129 YP_004109222.1 CDS Rpdx1_2906 NC_014834.1 3105544 3107049 R KEGG: nha:Nham_2069 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(3105544..3107049) Rhodopseudomonas palustris DX-1 10065130 YP_004109223.1 CDS Rpdx1_2907 NC_014834.1 3107046 3108251 R KEGG: nha:Nham_2070 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(3107046..3108251) Rhodopseudomonas palustris DX-1 10065131 YP_004109224.1 CDS Rpdx1_2908 NC_014834.1 3108272 3109288 R TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bra:BRADO3913 putative amino-acid ABC transporter, substrate-binding protein; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic-binding protein complement(3108272..3109288) Rhodopseudomonas palustris DX-1 10065132 YP_004109225.1 CDS Rpdx1_2909 NC_014834.1 3109614 3110810 D KEGG: bra:BRADO3914 cystathionine beta-lyase, PLP-dependent (beta-cystathionase); TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; cystathionine beta-lyase 3109614..3110810 Rhodopseudomonas palustris DX-1 10065133 YP_004109226.1 CDS Rpdx1_2910 NC_014834.1 3110980 3111318 R PFAM: lipid A biosynthesis domain protein; KEGG: oca:OCAR_6054 lipid A biosynthesis domain protein; lipid A biosynthesis domain-containing protein complement(3110980..3111318) Rhodopseudomonas palustris DX-1 10065134 YP_004109227.1 CDS Rpdx1_2911 NC_014834.1 3111318 3112070 R PFAM: glycosyl transferase family 2; KEGG: nha:Nham_2075 glycosyl transferase family protein; glycosyl transferase family 2 protein complement(3111318..3112070) Rhodopseudomonas palustris DX-1 10065135 YP_004109228.1 CDS Rpdx1_2912 NC_014834.1 3112137 3112979 R KEGG: bja:blr4441 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase PA-phosphatase-like protein complement(3112137..3112979) Rhodopseudomonas palustris DX-1 10065136 YP_004109229.1 CDS Rpdx1_2913 NC_014834.1 3112981 3114726 R PFAM: glycosyl transferase family 39; KEGG: bbt:BBta_3917 glycosyl transferase family protein 39; glycosyl transferase family protein complement(3112981..3114726) Rhodopseudomonas palustris DX-1 10065137 YP_004109230.1 CDS Rpdx1_2914 NC_014834.1 3114777 3116972 R TIGRFAM: penicillin-binding protein 1C; KEGG: nha:Nham_2077 penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; penicillin-binding protein 1C complement(3114777..3116972) Rhodopseudomonas palustris DX-1 10065138 YP_004109231.1 CDS Rpdx1_2915 NC_014834.1 3116969 3122182 R PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: nha:Nham_2078 alpha-2-macroglobulin-like; alpha-2-macroglobulin domain-containing protein complement(3116969..3122182) Rhodopseudomonas palustris DX-1 10065139 YP_004109232.1 CDS Rpdx1_2916 NC_014834.1 3122698 3123348 D KEGG: pfl:PFL_2817 hypothetical protein; hypothetical protein 3122698..3123348 Rhodopseudomonas palustris DX-1 10065141 YP_004109233.1 CDS Rpdx1_2917 NC_014834.1 3123450 3123887 R KEGG: bja:blr5152 hypothetical protein; hypothetical protein complement(3123450..3123887) Rhodopseudomonas palustris DX-1 10065142 YP_004109234.1 CDS Rpdx1_2918 NC_014834.1 3124120 3124473 D KEGG: bpt:Bpet4408 hypothetical protein; hypothetical protein 3124120..3124473 Rhodopseudomonas palustris DX-1 10065143 YP_004109235.1 CDS Rpdx1_2919 NC_014834.1 3124474 3124953 R PFAM: protein of unknown function DUF1212; KEGG: hypothetical protein; hypothetical protein complement(3124474..3124953) Rhodopseudomonas palustris DX-1 10065144 YP_004109236.1 CDS Rpdx1_2920 NC_014834.1 3124950 3125756 R PFAM: protein of unknown function DUF1212; KEGG: hypothetical protein; hypothetical protein complement(3124950..3125756) Rhodopseudomonas palustris DX-1 10065145 YP_004109237.1 CDS Rpdx1_2921 NC_014834.1 3125976 3126317 D KEGG: met:M446_4370 triple helix repeat-containing collagen; triple helix repeat-containing collagen 3125976..3126317 Rhodopseudomonas palustris DX-1 10065146 YP_004109238.1 CDS Rpdx1_2922 NC_014834.1 3126366 3126824 R KEGG: bja:blr2405 peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type; peptidyl-prolyl isomerase complement(3126366..3126824) Rhodopseudomonas palustris DX-1 10065147 YP_004109239.1 CDS Rpdx1_2923 NC_014834.1 3127060 3127194 D KEGG: nha:Nham_2176 hypothetical protein; hypothetical protein 3127060..3127194 Rhodopseudomonas palustris DX-1 10065148 YP_004109240.1 CDS Rpdx1_2924 NC_014834.1 3127238 3127480 R TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: dac:Daci_3133 pentapeptide MXKDX repeat-containing protein; pentapeptide MXKDX repeat-containing protein complement(3127238..3127480) Rhodopseudomonas palustris DX-1 10065149 YP_004109241.1 CDS Rpdx1_2925 NC_014834.1 3127661 3128614 R PFAM: pyruvate carboxyltransferase; KEGG: bja:blr4422 hydroxymethylglutaryl-CoA lyase; pyruvate carboxyltransferase complement(3127661..3128614) Rhodopseudomonas palustris DX-1 10065150 YP_004109242.1 CDS Rpdx1_2926 NC_014834.1 3128686 3130698 R PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: bja:blr4421 3-methylcrotonyl-CoA carboxylase alpha subunit; carbamoyl-phosphate synthase L chain ATP-binding protein complement(3128686..3130698) Rhodopseudomonas palustris DX-1 10065151 YP_004109243.1 CDS Rpdx1_2927 NC_014834.1 3130715 3132319 R KEGG: nha:Nham_2125 propionyl-CoA carboxylase; PFAM: carboxyl transferase; methylcrotonoyl-CoA carboxylase complement(3130715..3132319) Rhodopseudomonas palustris DX-1 10065152 YP_004109244.1 CDS Rpdx1_2928 NC_014834.1 3132514 3132819 R PFAM: ETC complex I subunit conserved region; KEGG: bra:BRADO3676 putative ETC complex I subunit region protein (fragment); ETC complex I subunit protein complement(3132514..3132819) Rhodopseudomonas palustris DX-1 10065153 YP_004109245.1 CDS Rpdx1_2929 NC_014834.1 3133060 3134349 D PFAM: conserved hypothetical protein; KEGG: bja:bll4413 hypothetical protein; hypothetical protein 3133060..3134349 Rhodopseudomonas palustris DX-1 10065154 YP_004109246.1 CDS Rpdx1_2930 NC_014834.1 3134283 3135401 R PFAM: glycosyl transferase group 1; KEGG: cja:CJA_0504 glycosyl transferase, putative, gt4E; glycosyl transferase group 1 protein complement(3134283..3135401) Rhodopseudomonas palustris DX-1 10065155 YP_004109247.1 CDS Rpdx1_2931 NC_014834.1 3135616 3136953 D PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mdi:METDI0840 putative phage integrase; integrase family protein 3135616..3136953 Rhodopseudomonas palustris DX-1 10065156 YP_004109248.1 CDS Rpdx1_2932 NC_014834.1 3137306 3138316 R PFAM: integrase family protein; KEGG: azc:AZC_3570 putative phage HP1 integrase; integrase family protein complement(3137306..3138316) Rhodopseudomonas palustris DX-1 10065157 YP_004109249.1 CDS Rpdx1_2933 NC_014834.1 3138313 3138720 R KEGG: met:M446_4953 MarR family transcriptional regulator; hypothetical protein complement(3138313..3138720) Rhodopseudomonas palustris DX-1 10065158 YP_004109250.1 CDS Rpdx1_2934 NC_014834.1 3138897 3139658 R manually curated; KEGG: mjl:Mjls_3915 stage II sporulation E family protein; hypothetical protein complement(3138897..3139658) Rhodopseudomonas palustris DX-1 10065159 YP_004109251.1 CDS Rpdx1_2935 NC_014834.1 3140214 3141167 D PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein; Integrase catalytic subunit 3140214..3141167 Rhodopseudomonas palustris DX-1 10065160 YP_004109252.1 CDS Rpdx1_2936 NC_014834.1 3141332 3141529 R hypothetical protein complement(3141332..3141529) Rhodopseudomonas palustris DX-1 10065161 YP_004109253.1 CDS Rpdx1_2937 NC_014834.1 3141533 3142309 R KEGG: rba:RB1579 thermostable carboxypeptidase 1; hypothetical protein complement(3141533..3142309) Rhodopseudomonas palustris DX-1 10065162 YP_004109254.1 CDS Rpdx1_2938 NC_014834.1 3142359 3142748 R KEGG: rcu:RCOM_1585570 hypothetical protein; hypothetical protein complement(3142359..3142748) Rhodopseudomonas palustris DX-1 10065163 YP_004109255.1 CDS Rpdx1_2939 NC_014834.1 3142823 3143017 R KEGG: tai:Taci_1729 hypothetical protein; hypothetical protein complement(3142823..3143017) Rhodopseudomonas palustris DX-1 10065164 YP_004109256.1 CDS Rpdx1_2940 NC_014834.1 3143260 3143445 R KEGG: tgu:100226749 homeodomain protein; hypothetical protein complement(3143260..3143445) Rhodopseudomonas palustris DX-1 10065165 YP_004109257.1 CDS Rpdx1_2941 NC_014834.1 3144158 3145087 D PFAM: Tail Collar domain protein; KEGG: pap:PSPA7_5071 putative tail fiber protein; Tail Collar domain-containing protein 3144158..3145087 Rhodopseudomonas palustris DX-1 10065166 YP_004109258.1 CDS Rpdx1_2942 NC_014834.1 3145322 3146929 D KEGG: apb:SAR116_0382 hypothetical genomic island protein; hypothetical protein 3145322..3146929 Rhodopseudomonas palustris DX-1 10065167 YP_004109259.1 CDS Rpdx1_2943 NC_014834.1 3147039 3147209 D hypothetical protein 3147039..3147209 Rhodopseudomonas palustris DX-1 10065168 YP_004109260.1 CDS Rpdx1_2944 NC_014834.1 3147292 3147531 D KEGG: dre:567922 similar to LReO_3; hypothetical protein 3147292..3147531 Rhodopseudomonas palustris DX-1 10065169 YP_004109261.1 CDS Rpdx1_2947 NC_014834.1 3149127 3150053 D KEGG: rlt:Rleg2_1152 hypothetical protein; hypothetical protein 3149127..3150053 Rhodopseudomonas palustris DX-1 10065172 YP_004109262.1 CDS Rpdx1_2948 NC_014834.1 3150060 3152564 D KEGG: ote:Oter_1689 cell wall surface anchor family protein; hypothetical protein 3150060..3152564 Rhodopseudomonas palustris DX-1 10065173 YP_004109263.1 CDS Rpdx1_2949 NC_014834.1 3152543 3153172 D KEGG: cbc:CbuK_0677 valyl-tRNA synthetase; hypothetical protein 3152543..3153172 Rhodopseudomonas palustris DX-1 10065174 YP_004109264.1 CDS Rpdx1_2950 NC_014834.1 3153138 3154736 D KEGG: apb:SAR116_0377 hypothetical protein; hypothetical protein 3153138..3154736 Rhodopseudomonas palustris DX-1 10065175 YP_004109265.1 CDS Rpdx1_2951 NC_014834.1 3154733 3156754 D KEGG: apb:SAR116_0376 putative portal protein; putative portal protein 3154733..3156754 Rhodopseudomonas palustris DX-1 10065176 YP_004109266.1 CDS Rpdx1_2952 NC_014834.1 3156764 3157258 D KEGG: gbr:Gbro_2152 translation initiation factor IF-2; hypothetical protein 3156764..3157258 Rhodopseudomonas palustris DX-1 10065177 YP_004109267.1 CDS Rpdx1_2953 NC_014834.1 3157309 3157572 D KEGG: pdi:BDI_0630 dihydroxyacetone kinase; hypothetical protein 3157309..3157572 Rhodopseudomonas palustris DX-1 10065178 YP_004109268.1 CDS Rpdx1_2954 NC_014834.1 3157591 3158643 D KEGG: apb:SAR116_0374 hypothetical protein; hypothetical protein 3157591..3158643 Rhodopseudomonas palustris DX-1 10065179 YP_004109269.1 CDS Rpdx1_2955 NC_014834.1 3158670 3159584 D KEGG: hth:HTH_0548 putative phage major head protein; putative phage major head protein 3158670..3159584 Rhodopseudomonas palustris DX-1 10065180 YP_004109270.1 CDS Rpdx1_2956 NC_014834.1 3159643 3159930 D KEGG: apb:SAR116_0372 acriflavin resistance protein; acriflavin resistance protein 3159643..3159930 Rhodopseudomonas palustris DX-1 10065181 YP_004109271.1 CDS Rpdx1_2957 NC_014834.1 3159934 3160557 D KEGG: apb:SAR116_0371 hypothetical protein; hypothetical protein 3159934..3160557 Rhodopseudomonas palustris DX-1 10065182 YP_004109272.1 CDS Rpdx1_2958 NC_014834.1 3160558 3162237 D KEGG: zro:ZYRO0F02728g hypothetical protein; hypothetical protein 3160558..3162237 Rhodopseudomonas palustris DX-1 10065183 YP_004109273.1 CDS Rpdx1_2959 NC_014834.1 3162234 3162653 D KEGG: bav:BAV1476 phage protein; hypothetical protein 3162234..3162653 Rhodopseudomonas palustris DX-1 10065184 YP_004109274.1 CDS Rpdx1_2960 NC_014834.1 3162880 3163509 D PFAM: glycoside hydrolase family 24; KEGG: mag:amb1525 phage-related lysozyme; glycoside hydrolase family protein 3162880..3163509 Rhodopseudomonas palustris DX-1 10065185 YP_004109275.1 CDS Rpdx1_2961 NC_014834.1 3163509 3163898 D KEGG: chl:Chy400_0986 hypothetical protein; hypothetical protein 3163509..3163898 Rhodopseudomonas palustris DX-1 10065186 YP_004109276.1 CDS Rpdx1_2962 NC_014834.1 3163867 3164106 D KEGG: xau:Xaut_4507 hypothetical protein; hypothetical protein 3163867..3164106 Rhodopseudomonas palustris DX-1 10065187 YP_004109277.1 CDS Rpdx1_2963 NC_014834.1 3164282 3164521 D KEGG: sps:SPs1725 M protein type 3; M protein type 3 3164282..3164521 Rhodopseudomonas palustris DX-1 10065188 YP_004109278.1 CDS Rpdx1_2964 NC_014834.1 3164577 3164813 R manually curated; KEGG: rme:Rmet_2265 hypothetical protein; hypothetical protein complement(3164577..3164813) Rhodopseudomonas palustris DX-1 10065189 YP_004109279.1 CDS Rpdx1_2965 NC_014834.1 3164886 3165143 R KEGG: sbi:SORBI_06g026970 hypothetical protein; hypothetical protein complement(3164886..3165143) Rhodopseudomonas palustris DX-1 10065190 YP_004109280.1 CDS Rpdx1_2966 NC_014834.1 3165143 3165298 R hypothetical protein complement(3165143..3165298) Rhodopseudomonas palustris DX-1 10065191 YP_004109281.1 CDS Rpdx1_2967 NC_014834.1 3165298 3165453 R hypothetical protein complement(3165298..3165453) Rhodopseudomonas palustris DX-1 10065192 YP_004109282.1 CDS Rpdx1_2968 NC_014834.1 3165453 3165914 R PFAM: 20S proteasome A and B subunits; KEGG: ppg:PputGB1_3423 20S proteasome A and B subunits; 20S proteasome subunits A/B complement(3165453..3165914) Rhodopseudomonas palustris DX-1 10065193 YP_004109283.1 CDS Rpdx1_2969 NC_014834.1 3165892 3166527 R KEGG: smt:Smal_0900 hypothetical protein; hypothetical protein complement(3165892..3166527) Rhodopseudomonas palustris DX-1 10065194 YP_004109284.1 CDS Rpdx1_2970 NC_014834.1 3166524 3166715 R hypothetical protein complement(3166524..3166715) Rhodopseudomonas palustris DX-1 10065195 YP_004109285.1 CDS Rpdx1_2971 NC_014834.1 3166708 3167310 R KEGG: ppu:PP_2272 hypothetical protein; hypothetical protein complement(3166708..3167310) Rhodopseudomonas palustris DX-1 10065196 YP_004109286.1 CDS Rpdx1_2972 NC_014834.1 3167318 3167470 R hypothetical protein complement(3167318..3167470) Rhodopseudomonas palustris DX-1 10065197 YP_004109287.1 CDS Rpdx1_2973 NC_014834.1 3167467 3167640 R KEGG: bpl:BURPS1106A_2403 hypothetical protein; hypothetical protein complement(3167467..3167640) Rhodopseudomonas palustris DX-1 10065198 YP_004109288.1 CDS Rpdx1_2974 NC_014834.1 3167658 3167963 R KEGG: ttj:TTHA1835 NADH oxidase; hypothetical protein complement(3167658..3167963) Rhodopseudomonas palustris DX-1 10065199 YP_004109289.1 CDS Rpdx1_2975 NC_014834.1 3167939 3168655 R KEGG: apb:SAR116_0390 putative phage exonuclease; PFAM: 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease complement(3167939..3168655) Rhodopseudomonas palustris DX-1 10065200 YP_004109290.1 CDS Rpdx1_2976 NC_014834.1 3168712 3168804 R hypothetical protein complement(3168712..3168804) Rhodopseudomonas palustris DX-1 10065201 YP_004109291.1 CDS Rpdx1_2977 NC_014834.1 3168950 3169147 R KEGG: dar:Daro_0434 hypothetical protein; hypothetical protein complement(3168950..3169147) Rhodopseudomonas palustris DX-1 10065202 YP_004109292.1 CDS Rpdx1_2978 NC_014834.1 3169352 3171436 R KEGG: ppu:PP_2273 DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; DNA-directed DNA polymerase complement(3169352..3171436) Rhodopseudomonas palustris DX-1 10065203 YP_004109293.1 CDS Rpdx1_2979 NC_014834.1 3171645 3171815 R hypothetical protein complement(3171645..3171815) Rhodopseudomonas palustris DX-1 10065204 YP_004109294.1 CDS Rpdx1_2980 NC_014834.1 3171815 3171994 R hypothetical protein complement(3171815..3171994) Rhodopseudomonas palustris DX-1 10065205 YP_004109295.1 CDS Rpdx1_2981 NC_014834.1 3171991 3172491 R KEGG: ppp:PHYPADRAFT_231479 hypothetical protein; hypothetical protein complement(3171991..3172491) Rhodopseudomonas palustris DX-1 10065206 YP_004109296.1 CDS Rpdx1_2982 NC_014834.1 3172458 3174083 R KEGG: azc:AZC_3598 DNA primase; DNA primase complement(3172458..3174083) Rhodopseudomonas palustris DX-1 10065207 YP_004109297.1 CDS Rpdx1_2983 NC_014834.1 3174067 3174555 R manually curated; KEGG: xce:Xcel_0567 hypothetical protein; hypothetical protein complement(3174067..3174555) Rhodopseudomonas palustris DX-1 10065208 YP_004109298.1 CDS Rpdx1_2984 NC_014834.1 3174548 3174655 R hypothetical protein complement(3174548..3174655) Rhodopseudomonas palustris DX-1 10065209 YP_004109299.1 CDS Rpdx1_2985 NC_014834.1 3174736 3174975 R KEGG: azc:AZC_3600 hypothetical protein; hypothetical protein complement(3174736..3174975) Rhodopseudomonas palustris DX-1 10065210 YP_004109300.1 CDS Rpdx1_2986 NC_014834.1 3174978 3175799 R PFAM: pentapeptide repeat protein; KEGG: cyn:Cyan7425_5254 pentapeptide repeat protein; pentapeptide repeat-containing protein complement(3174978..3175799) Rhodopseudomonas palustris DX-1 10065211 YP_004109301.1 CDS Rpdx1_2987 NC_014834.1 3175913 3176161 R KEGG: scl:sce6798 anti-anti sigma factor protein; hypothetical protein complement(3175913..3176161) Rhodopseudomonas palustris DX-1 10065212 YP_004109302.1 CDS Rpdx1_2988 NC_014834.1 3176171 3176611 R PFAM: endonuclease I; KEGG: ppu:PP_2268 phage endodeoxyribonuclease I; endonuclease I complement(3176171..3176611) Rhodopseudomonas palustris DX-1 10065213 YP_004109303.1 CDS Rpdx1_2989 NC_014834.1 3176611 3177192 R KEGG: apb:SAR116_0394 possible DNA-dependent RNA polymerase; hypothetical protein complement(3176611..3177192) Rhodopseudomonas palustris DX-1 10065214 YP_004109304.1 CDS Rpdx1_2990 NC_014834.1 3177316 3177792 R KEGG: sbi:SORBI_03g027965 hypothetical protein; hypothetical protein complement(3177316..3177792) Rhodopseudomonas palustris DX-1 10065215 YP_004109305.1 CDS Rpdx1_2991 NC_014834.1 3177789 3177935 R hypothetical protein complement(3177789..3177935) Rhodopseudomonas palustris DX-1 10065216 YP_004109306.1 CDS Rpdx1_2992 NC_014834.1 3178319 3180847 R KEGG: ppu:PP_2266 DNA-directed RNA polymerase, bacteriophage and mitochondrial type; PFAM: DNA-directed RNA polymerase bacteriophage type; DNA-directed RNA polymerase complement(3178319..3180847) Rhodopseudomonas palustris DX-1 10065217 YP_004109307.1 CDS Rpdx1_2993 NC_014834.1 3181261 3181746 R PFAM: protein of unknown function DUF192; KEGG: bja:blr4411 hypothetical protein; hypothetical protein complement(3181261..3181746) Rhodopseudomonas palustris DX-1 10065219 YP_004109308.1 CDS Rpdx1_2994 NC_014834.1 3181925 3182620 R KEGG: bja:blr4410 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein complement(3181925..3182620) Rhodopseudomonas palustris DX-1 10065220 YP_004109309.1 CDS Rpdx1_2995 NC_014834.1 3182822 3183583 R PFAM: Silent information regulator protein Sir2; KEGG: bja:blr4409 hypothetical protein; silent information regulator protein Sir2 complement(3182822..3183583) Rhodopseudomonas palustris DX-1 10065221 YP_004109310.1 CDS Rpdx1_2996 NC_014834.1 3184043 3184492 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nha:Nham_2145 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3184043..3184492 Rhodopseudomonas palustris DX-1 10065222 YP_004109311.1 CDS Rpdx1_2997 NC_014834.1 3184773 3185030 R PFAM: type IV pilus assembly PilZ; KEGG: bra:BRADO3661 hypothetical protein; type IV pilus assembly PilZ complement(3184773..3185030) Rhodopseudomonas palustris DX-1 10065223 YP_004109312.1 CDS Rpdx1_2998 NC_014834.1 3185427 3185651 R KEGG: cac:CAC0259 fusion NifN/K+nifB (NifN-nitrogenase iron molybdenum cofactor biosinthesis protein, NifK-nitrogenase molibdenum-iron protein beta chain, NifB-nitrogenase iron-molibdenum cofactor biosynthesis protein); hypothetical protein complement(3185427..3185651) Rhodopseudomonas palustris DX-1 10065225 YP_004109313.1 CDS Rpdx1_2999 NC_014834.1 3186166 3186756 D KEGG: nha:Nham_2298 hypothetical protein; hypothetical protein 3186166..3186756 Rhodopseudomonas palustris DX-1 10065226 YP_004109314.1 CDS Rpdx1_3000 NC_014834.1 3186796 3187056 R KEGG: nha:Nham_2299 hypothetical protein; hypothetical protein complement(3186796..3187056) Rhodopseudomonas palustris DX-1 10065227 YP_004109315.1 CDS Rpdx1_3001 NC_014834.1 3187214 3188305 R TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: nha:Nham_2300 hypothetical protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein complement(3187214..3188305) Rhodopseudomonas palustris DX-1 10065228 YP_004109316.1 CDS Rpdx1_3002 NC_014834.1 3188302 3189396 R KEGG: bbt:BBta_4013 putative lysyl-tRNA synthetase (lysine--tRNA ligase); TIGRFAM: lysyl-tRNA synthetase-related protein GenX; PFAM: tRNA synthetase class II (D K and N); lysyl-tRNA synthetase-like protein GenX complement(3188302..3189396) Rhodopseudomonas palustris DX-1 10065229 YP_004109317.1 CDS Rpdx1_3003 NC_014834.1 3189495 3190061 D KEGG: nwi:Nwi_1643 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein; translation elongation factor P 3189495..3190061 Rhodopseudomonas palustris DX-1 10065230 YP_004109318.1 CDS Rpdx1_3004 NC_014834.1 3190140 3191120 R KEGG: bbt:BBta_5358 putative lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic subunit complement(3190140..3191120) Rhodopseudomonas palustris DX-1 10065231 YP_004109319.1 CDS Rpdx1_3005 NC_014834.1 3191336 3192565 D KEGG: bbt:BBta_4006 putative membrane-bound lytic transglycosylase precursor protein, putative signal peptide; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; lytic murein transglycosylase 3191336..3192565 Rhodopseudomonas palustris DX-1 10065232 YP_004109320.1 CDS Rpdx1_3006 NC_014834.1 3192583 3193701 D KEGG: dar:Daro_1033 hypothetical protein; hypothetical protein 3192583..3193701 Rhodopseudomonas palustris DX-1 10065233 YP_004109321.1 CDS Rpdx1_3007 NC_014834.1 3193785 3194075 D KEGG: sme:SMc00611 hypothetical protein; hypothetical protein 3193785..3194075 Rhodopseudomonas palustris DX-1 10065234 YP_004109322.1 CDS Rpdx1_3008 NC_014834.1 3194233 3196074 R KEGG: bbt:BBta_4000 exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; single-stranded-DNA-specific exonuclease RecJ complement(3194233..3196074) Rhodopseudomonas palustris DX-1 10065235 YP_004109323.1 CDS Rpdx1_3009 NC_014834.1 3196289 3197017 R KEGG: bja:blr4364 putative haloacid dehalogenase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase complement(3196289..3197017) Rhodopseudomonas palustris DX-1 10065236 YP_004109324.1 CDS Rpdx1_3010 NC_014834.1 3197195 3197638 R PFAM: GCN5-related N-acetyltransferase; KEGG: mno:Mnod_3262 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3197195..3197638) Rhodopseudomonas palustris DX-1 10065237 YP_004109325.1 CDS Rpdx1_3011 NC_014834.1 3197651 3198655 R TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: oca:OCAR_6017 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein; fructose-1,6-bisphosphatase complement(3197651..3198655) Rhodopseudomonas palustris DX-1 10065238 YP_004109326.1 CDS Rpdx1_3012 NC_014834.1 3198718 3200043 R PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; KEGG: bbt:BBta_3996 homoserine dehydrogenase; homoserine dehydrogenase complement(3198718..3200043) Rhodopseudomonas palustris DX-1 10065239 YP_004109327.1 CDS Rpdx1_3013 NC_014834.1 3200121 3201341 R PFAM: aminotransferase class I and II; KEGG: bra:BRADO3571 aminotransferase; class I/II aminotransferase complement(3200121..3201341) Rhodopseudomonas palustris DX-1 10065240 YP_004109328.1 CDS Rpdx1_3014 NC_014834.1 3201526 3201834 R KEGG: nha:Nham_2311 hypothetical protein; hypothetical protein complement(3201526..3201834) Rhodopseudomonas palustris DX-1 10065241 YP_004109329.1 CDS Rpdx1_3015 NC_014834.1 3202162 3203967 D KEGG: bra:BRADO3568 poly-beta-hydroxybutyrate polymerase; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; poly(R)-hydroxyalkanoic acid synthase 3202162..3203967 Rhodopseudomonas palustris DX-1 10065242 YP_004109330.1 CDS Rpdx1_3016 NC_014834.1 3204009 3205286 R PFAM: Amidase; KEGG: bra:BRADO0324 putative amidase (AmiD); amidase complement(3204009..3205286) Rhodopseudomonas palustris DX-1 10065243 YP_004109331.1 CDS Rpdx1_3017 NC_014834.1 3205356 3206333 R KEGG: pnu:Pnuc_1180 putative ABC transporter, periplasmic protein; putative ABC transporter periplasmic protein complement(3205356..3206333) Rhodopseudomonas palustris DX-1 10065244 YP_004109332.1 CDS Rpdx1_3018 NC_014834.1 3206390 3207268 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pnu:Pnuc_1181 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(3206390..3207268) Rhodopseudomonas palustris DX-1 10065245 YP_004109333.1 CDS Rpdx1_3019 NC_014834.1 3207268 3208056 R KEGG: pnu:Pnuc_1182 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3207268..3208056) Rhodopseudomonas palustris DX-1 10065246 YP_004109334.1 CDS Rpdx1_3020 NC_014834.1 3208357 3209055 D KEGG: bph:Bphy_6303 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3208357..3209055 Rhodopseudomonas palustris DX-1 10065247 YP_004109335.1 CDS Rpdx1_3021 NC_014834.1 3209093 3209455 R KEGG: nha:Nham_2503 hypothetical protein; hypothetical protein complement(3209093..3209455) Rhodopseudomonas palustris DX-1 10065248 YP_004109336.1 CDS Rpdx1_3022 NC_014834.1 3209703 3211499 R KEGG: azc:AZC_3721 elongator protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(3209703..3211499) Rhodopseudomonas palustris DX-1 10065249 YP_004109337.1 CDS Rpdx1_3023 NC_014834.1 3211754 3212353 R PFAM: Methyltransferase type 12; KEGG: atc:AGR_C_4253 hypothetical protein; type 12 methyltransferase complement(3211754..3212353) Rhodopseudomonas palustris DX-1 10065250 YP_004109338.1 CDS Rpdx1_3024 NC_014834.1 3212419 3213414 R TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: nha:Nham_2314 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; N-acetyl-gamma-glutamyl-phosphate reductase complement(3212419..3213414) Rhodopseudomonas palustris DX-1 10065251 YP_004109339.1 CDS Rpdx1_3025 NC_014834.1 3213429 3214094 R PFAM: Negative transcriptional regulator; KEGG: bbt:BBta_3982 negative transcriptional regulator; FMN-binding negative transcriptional regulator complement(3213429..3214094) Rhodopseudomonas palustris DX-1 10065252 YP_004109340.1 CDS Rpdx1_3026 NC_014834.1 3214543 3215088 D PFAM: Protein of unknown function DUF2087; KEGG: bid:Bind_2948 hypothetical protein; hypothetical protein 3214543..3215088 Rhodopseudomonas palustris DX-1 10065253 YP_004109341.1 CDS Rpdx1_3027 NC_014834.1 3215121 3216026 D PFAM: alpha/beta hydrolase fold; KEGG: gau:GAU_0062 putative hydrolase; alpha/beta hydrolase fold protein 3215121..3216026 Rhodopseudomonas palustris DX-1 10065254 YP_004109342.1 CDS Rpdx1_3028 NC_014834.1 3216030 3217019 R KEGG: bra:BRADO4092 putative metallo-beta-lactamase family protein; putative metallo-beta-lactamase family protein complement(3216030..3217019) Rhodopseudomonas palustris DX-1 10065255 YP_004109343.1 CDS Rpdx1_3029 NC_014834.1 3217109 3217636 R PFAM: SNARE associated Golgi protein; KEGG: bbt:BBta_3981 hypothetical protein; hypothetical protein complement(3217109..3217636) Rhodopseudomonas palustris DX-1 10065256 YP_004109344.1 CDS Rpdx1_3030 NC_014834.1 3218092 3220140 D SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: nwi:Nwi_1653 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; DNA topoisomerase IV subunit B 3218092..3220140 Rhodopseudomonas palustris DX-1 10065257 YP_004109345.1 CDS Rpdx1_3031 NC_014834.1 3220266 3220469 D KEGG: nha:Nham_2319 hypothetical protein; hypothetical protein 3220266..3220469 Rhodopseudomonas palustris DX-1 10065258 YP_004109346.1 CDS Rpdx1_3032 NC_014834.1 3220488 3221924 D KEGG: rru:Rru_A0400 hypothetical protein; hypothetical protein 3220488..3221924 Rhodopseudomonas palustris DX-1 10065259 YP_004109347.1 CDS Rpdx1_3033 NC_014834.1 3221952 3223466 R PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bbt:BBta_3976 hypothetical protein; peptidase C14 caspase catalytic subunit p20 complement(3221952..3223466) Rhodopseudomonas palustris DX-1 10065260 YP_004109348.1 CDS Rpdx1_3034 NC_014834.1 3223642 3225327 R KEGG: bra:BRADO2559 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3223642..3225327) Rhodopseudomonas palustris DX-1 10065261 YP_004109349.1 CDS Rpdx1_3035 NC_014834.1 3225654 3226670 D KEGG: bja:blr7666 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3225654..3226670 Rhodopseudomonas palustris DX-1 10065262 YP_004109350.1 CDS Rpdx1_3036 NC_014834.1 3226945 3228354 D KEGG: bja:bll4348 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 3226945..3228354 Rhodopseudomonas palustris DX-1 10065263 YP_004109351.1 CDS Rpdx1_3037 NC_014834.1 3228460 3229527 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:bll4347 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3228460..3229527 Rhodopseudomonas palustris DX-1 10065264 YP_004109352.1 CDS Rpdx1_3038 NC_014834.1 3229532 3230035 R PFAM: TfoX domain protein; KEGG: bra:BRADO3547 hypothetical protein; TfoX domain-containing protein complement(3229532..3230035) Rhodopseudomonas palustris DX-1 10065265 YP_004109353.1 CDS Rpdx1_3039 NC_014834.1 3230118 3230594 R PFAM: Endoribonuclease L-PSP; KEGG: tmz:Tmz1t_0821 endoribonuclease L-PSP; endoribonuclease L-PSP complement(3230118..3230594) Rhodopseudomonas palustris DX-1 10065266 YP_004109354.1 CDS Rpdx1_3040 NC_014834.1 3230591 3231694 R KEGG: scb:SCAB_78071 hypothetical protein; hypothetical protein complement(3230591..3231694) Rhodopseudomonas palustris DX-1 10065267 YP_004109355.1 CDS Rpdx1_3041 NC_014834.1 3231700 3233664 R KEGG: hch:HCH_03141 hypothetical protein; hypothetical protein complement(3231700..3233664) Rhodopseudomonas palustris DX-1 10065268 YP_004109356.1 CDS Rpdx1_3042 NC_014834.1 3233819 3234190 R KEGG: nwi:Nwi_1659 HesB/YadR/YfhF; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein complement(3233819..3234190) Rhodopseudomonas palustris DX-1 10065269 YP_004109357.1 CDS Rpdx1_3043 NC_014834.1 3234320 3234736 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: csa:Csal_3007 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(3234320..3234736) Rhodopseudomonas palustris DX-1 10065270 YP_004109358.1 CDS Rpdx1_3044 NC_014834.1 3234744 3235112 R KEGG: bja:blr4343 hypothetical protein; TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; FeS assembly SUF system protein complement(3234744..3235112) Rhodopseudomonas palustris DX-1 10065271 YP_004109359.1 CDS Rpdx1_3045 NC_014834.1 3235109 3236356 R KEGG: bbt:BBta_3969 cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; cysteine desulfurase complement(3235109..3236356) Rhodopseudomonas palustris DX-1 10065272 YP_004109360.1 CDS Rpdx1_3046 NC_014834.1 3236353 3237666 R KEGG: bra:BRADO3543 SufD, needed for FhuF Fe-S center production/stability; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; FeS assembly protein SufD complement(3236353..3237666) Rhodopseudomonas palustris DX-1 10065273 YP_004109361.1 CDS Rpdx1_3047 NC_014834.1 3237690 3238448 R TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: bra:BRADO3542 SufC, related to ABC transporter associated with Fe-S cluster assembly ATP-binding protein; SMART: AAA ATPase; FeS assembly ATPase SufC complement(3237690..3238448) Rhodopseudomonas palustris DX-1 10065274 YP_004109362.1 CDS Rpdx1_3048 NC_014834.1 3238583 3240079 R KEGG: bra:BRADO3540 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; FeS assembly protein SufB complement(3238583..3240079) Rhodopseudomonas palustris DX-1 10065275 YP_004109363.1 CDS Rpdx1_3049 NC_014834.1 3240163 3241335 R KEGG: bja:blr4338 cysteine desulfurase; PFAM: aminotransferase class V; cysteine desulfurase complement(3240163..3241335) Rhodopseudomonas palustris DX-1 10065276 YP_004109364.1 CDS Rpdx1_3050 NC_014834.1 3241572 3242219 D PFAM: alpha/beta hydrolase fold; KEGG: nwi:Nwi_1666 hypothetical protein; alpha/beta hydrolase fold protein 3241572..3242219 Rhodopseudomonas palustris DX-1 10065277 YP_004109365.1 CDS Rpdx1_3051 NC_014834.1 3242239 3243342 R PFAM: protein of unknown function UPF0075; KEGG: nha:Nham_2331 anhydro-N-acetylmuramic acid kinase; hypothetical protein complement(3242239..3243342) Rhodopseudomonas palustris DX-1 10065278 YP_004109366.1 CDS Rpdx1_3052 NC_014834.1 3243500 3244756 D TIGRFAM: tyrosyl-tRNA synthetase; KEGG: nwi:Nwi_1668 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tyrosyl-tRNA synthetase 3243500..3244756 Rhodopseudomonas palustris DX-1 10065279 YP_004109367.1 CDS Rpdx1_3053 NC_014834.1 3244841 3246058 D PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3959 hypothetical protein; major facilitator superfamily protein 3244841..3246058 Rhodopseudomonas palustris DX-1 10065280 YP_004109368.1 CDS Rpdx1_3054 NC_014834.1 3246282 3246845 D KEGG: reh:H16_A3123 cytochrome b561; cytochrome b561 3246282..3246845 Rhodopseudomonas palustris DX-1 10065281 YP_004109369.1 CDS Rpdx1_3055 NC_014834.1 3246883 3250602 R KEGG: nha:Nham_2333 hypothetical protein; hypothetical protein complement(3246883..3250602) Rhodopseudomonas palustris DX-1 10065282 YP_004109370.1 CDS Rpdx1_3056 NC_014834.1 3250794 3251402 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bra:BRADO3529 hypothetical protein; alkyl hydroperoxide reductase 3250794..3251402 Rhodopseudomonas palustris DX-1 10065283 YP_004109371.1 CDS Rpdx1_3057 NC_014834.1 3251496 3252866 D PFAM: Peptidase M23; KEGG: bbt:BBta_3955 putative metalloendopeptidase; peptidase M23 3251496..3252866 Rhodopseudomonas palustris DX-1 10065284 YP_004109372.1 CDS Rpdx1_3058 NC_014834.1 3253016 3254147 R manually curated; TIGRFAM: peptide chain release factor 2; KEGG: bpm:BURPS1710b_3602 hypothetical protein; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 2 complement(join(3253016..3254077,3254079..3254147)) Rhodopseudomonas palustris DX-1 10065285 YP_004109373.1 CDS Rpdx1_3059 NC_014834.1 3254258 3256768 R TIGRFAM: penicillin-binding protein, 1A family; KEGG: nha:Nham_1824 penicillin-binding protein 1A; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein complement(3254258..3256768) Rhodopseudomonas palustris DX-1 10065286 YP_004109374.1 CDS Rpdx1_3060 NC_014834.1 3256960 3258270 R manually curated; PFAM: cell wall hydrolase/autolysin; KEGG: bja:blr4306 putative N-acetylmuramoyl-L-alanine amidase precursor; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(3256960..3258270) Rhodopseudomonas palustris DX-1 10065287 YP_004109375.1 CDS Rpdx1_3061 NC_014834.1 3258970 3262131 D KEGG: bja:bll4305 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; ribonuclease, Rne/Rng family 3258970..3262131 Rhodopseudomonas palustris DX-1 10065288 YP_004109376.1 CDS Rpdx1_3062 NC_014834.1 3262439 3263776 R PFAM: sodium:dicarboxylate symporter; KEGG: bra:BRADO3510 C4-dicarboxylate transport protein; sodium:dicarboxylate symporter complement(3262439..3263776) Rhodopseudomonas palustris DX-1 10065289 YP_004109377.1 CDS Rpdx1_3063 NC_014834.1 3263873 3264490 R PFAM: BioY protein; KEGG: bja:blr4297 hypothetical protein; BioY protein complement(3263873..3264490) Rhodopseudomonas palustris DX-1 10065290 YP_004109378.1 CDS Rpdx1_3064 NC_014834.1 3264589 3265779 R PFAM: aminotransferase class I and II; KEGG: nha:Nham_2183 aminotransferase, class I and II; class I/II aminotransferase complement(3264589..3265779) Rhodopseudomonas palustris DX-1 10065291 YP_004109379.1 CDS Rpdx1_3065 NC_014834.1 3265888 3267315 D PFAM: peptidase M48 Ste24p; KEGG: bja:bll4295 hypothetical protein; peptidase M48 Ste24p 3265888..3267315 Rhodopseudomonas palustris DX-1 10065292 YP_004109380.1 CDS Rpdx1_3066 NC_014834.1 3267501 3267896 D PFAM: BA14K family protein; KEGG: nha:Nham_0272 hypothetical protein; BA14K family protein 3267501..3267896 Rhodopseudomonas palustris DX-1 10065293 YP_004109381.1 CDS Rpdx1_3067 NC_014834.1 3268094 3268723 D KEGG: maq:Maqu_0381 peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; peroxidase 3268094..3268723 Rhodopseudomonas palustris DX-1 10065294 YP_004109382.1 CDS Rpdx1_3068 NC_014834.1 3268912 3269679 D PFAM: DSBA oxidoreductase; KEGG: nwi:Nwi_1750 DsbA oxidoreductase; DSBA oxidoreductase 3268912..3269679 Rhodopseudomonas palustris DX-1 10065295 YP_004109383.1 CDS Rpdx1_3069 NC_014834.1 3269782 3270468 R PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: bac:BamMC406_0585 TetR family transcriptional regulator; regulatory protein TetR complement(3269782..3270468) Rhodopseudomonas palustris DX-1 10065296 YP_004109384.1 CDS Rpdx1_3070 NC_014834.1 3270465 3271418 R PFAM: cation efflux protein; KEGG: ppw:PputW619_3985 cation efflux protein; cation efflux protein complement(3270465..3271418) Rhodopseudomonas palustris DX-1 10065297 YP_004109385.1 CDS Rpdx1_3071 NC_014834.1 3271760 3271972 R KEGG: bbt:BBta_3130 hypothetical protein; hypothetical protein complement(3271760..3271972) Rhodopseudomonas palustris DX-1 10065298 YP_004109386.1 CDS Rpdx1_3072 NC_014834.1 3272493 3272948 D TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: nha:Nham_2187 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 3272493..3272948 Rhodopseudomonas palustris DX-1 10065299 YP_004109387.1 CDS Rpdx1_3073 NC_014834.1 3272991 3273491 D KEGG: bbt:BBta_4215 biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 3272991..3273491 Rhodopseudomonas palustris DX-1 10065300 YP_004109388.1 CDS Rpdx1_3074 NC_014834.1 3273601 3274953 D KEGG: bbt:BBta_4216 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; acetyl-CoA carboxylase, biotin carboxylase 3273601..3274953 Rhodopseudomonas palustris DX-1 10065301 YP_004109389.1 CDS Rpdx1_3075 NC_014834.1 3275137 3276669 D KEGG: bra:BRADO3499 putative two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; multi-sensor signal transduction histidine kinase 3275137..3276669 Rhodopseudomonas palustris DX-1 10065302 YP_004109390.1 CDS Rpdx1_3076 NC_014834.1 3276666 3277109 D KEGG: bbt:BBta_4218 putative two-component response regulator/receiver (CheY-like protein); PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 3276666..3277109 Rhodopseudomonas palustris DX-1 10065303 YP_004109391.1 CDS Rpdx1_3077 NC_014834.1 3277106 3278194 D KEGG: nha:Nham_2192 signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; signal transduction histidine kinase 3277106..3278194 Rhodopseudomonas palustris DX-1 10065304 YP_004109392.1 CDS Rpdx1_3078 NC_014834.1 3278238 3278909 D KEGG: rlt:Rleg2_5786 hypothetical protein; hypothetical protein 3278238..3278909 Rhodopseudomonas palustris DX-1 10065305 YP_004109393.1 CDS Rpdx1_3079 NC_014834.1 3279150 3280367 D KEGG: nha:Nham_3404 hypothetical protein; hypothetical protein 3279150..3280367 Rhodopseudomonas palustris DX-1 10065306 YP_004109394.1 CDS Rpdx1_3080 NC_014834.1 3280441 3281118 D TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: nwi:Nwi_1757 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 3280441..3281118 Rhodopseudomonas palustris DX-1 10065307 YP_004109395.1 CDS Rpdx1_3081 NC_014834.1 3281133 3282107 R PFAM: Protein of unknown function DUF2155; KEGG: nha:Nham_1811 hypothetical protein; hypothetical protein complement(3281133..3282107) Rhodopseudomonas palustris DX-1 10065308 YP_004109396.1 CDS Rpdx1_3082 NC_014834.1 3282340 3283284 D KEGG: bbt:BBta_4223 putative lipase/esterase; putative lipase/esterase 3282340..3283284 Rhodopseudomonas palustris DX-1 10065309 YP_004109397.1 CDS Rpdx1_3083 NC_014834.1 3283392 3284726 D KEGG: bja:bll4656 hypothetical protein; beta-agarase 3283392..3284726 Rhodopseudomonas palustris DX-1 10065310 YP_004109398.1 CDS Rpdx1_3084 NC_014834.1 3284748 3285686 R KEGG: bbt:BBta_4229 transcriptional regulator; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(3284748..3285686) Rhodopseudomonas palustris DX-1 10065311 YP_004109399.1 CDS Rpdx1_3085 NC_014834.1 3285809 3286513 D PFAM: ThiJ/PfpI domain protein; KEGG: bja:bll4280 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 3285809..3286513 Rhodopseudomonas palustris DX-1 10065312 YP_004109400.1 CDS Rpdx1_3086 NC_014834.1 3286538 3286948 R PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: oca:OCAR_6312 NADH dehydrogenase; NADH:ubiquinone oxidoreductase 17.2 kD subunit complement(3286538..3286948) Rhodopseudomonas palustris DX-1 10065313 YP_004109401.1 CDS Rpdx1_3087 NC_014834.1 3287302 3287646 D KEGG: scl:sce6535 putative exported peptidase; putative exported peptidase 3287302..3287646 Rhodopseudomonas palustris DX-1 10065314 YP_004109402.1 CDS Rpdx1_3089 NC_014834.1 3288091 3290325 D PFAM: Lytic transglycosylase catalytic; KEGG: bbt:BBta_4695 putative soluble lytic transglycosylase (SLT); lytic transglycosylase 3288091..3290325 Rhodopseudomonas palustris DX-1 10065316 YP_004109403.1 CDS Rpdx1_3090 NC_014834.1 3290628 3292079 R PFAM: porin; KEGG: bbt:BBta_3063 porin precursor domain-containing protein; porin complement(3290628..3292079) Rhodopseudomonas palustris DX-1 10065317 YP_004109404.1 CDS Rpdx1_3091 NC_014834.1 3293060 3293302 D KEGG: bbt:BBta_6055 hypothetical protein; hypothetical protein 3293060..3293302 Rhodopseudomonas palustris DX-1 10065319 YP_004109405.1 CDS Rpdx1_3092 NC_014834.1 3293299 3293994 R KEGG: modB2; molybdate ABC transporter permease ModB-2; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit complement(3293299..3293994) Rhodopseudomonas palustris DX-1 10065320 YP_004109406.1 CDS Rpdx1_3093 NC_014834.1 3294001 3294726 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: modA2; molybdate ABC transporter periplasmic molybdate-binding protein ModA-2; molybdenum ABC transporter periplasmic molybdate-binding protein complement(3294001..3294726) Rhodopseudomonas palustris DX-1 10065321 YP_004109407.1 CDS Rpdx1_3094 NC_014834.1 3294828 3295772 D KEGG: modC2; molybdate ABC transporter ATP-binding protein ModC-2; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3294828..3295772 Rhodopseudomonas palustris DX-1 10065322 YP_004109408.1 CDS Rpdx1_3095 NC_014834.1 3296077 3296838 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: acr:Acry_1422 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3296077..3296838) Rhodopseudomonas palustris DX-1 10065323 YP_004109409.1 CDS Rpdx1_3096 NC_014834.1 3296854 3298593 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bbt:BBta_3208 putative nitrilase/cyanide hydratase family protein (carbon-nitrogen hydrolase); nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3296854..3298593) Rhodopseudomonas palustris DX-1 10065324 YP_004109410.1 CDS Rpdx1_3097 NC_014834.1 3298608 3299597 R PFAM: Acetamidase/Formamidase; KEGG: bbt:BBta_3207 putative acetamidase/formamidase family protein; acetamidase/formamidase complement(3298608..3299597) Rhodopseudomonas palustris DX-1 10065325 YP_004109411.1 CDS Rpdx1_3098 NC_014834.1 3299622 3300335 R KEGG: bra:BRADO4854 putative branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3299622..3300335) Rhodopseudomonas palustris DX-1 10065326 YP_004109412.1 CDS Rpdx1_3099 NC_014834.1 3300328 3301050 R KEGG: bbt:BBta_3205 putative branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3300328..3301050) Rhodopseudomonas palustris DX-1 10065327 YP_004109413.1 CDS Rpdx1_3100 NC_014834.1 3301050 3302114 R PFAM: inner-membrane translocator; KEGG: bra:BRADO4856 branched chain amino acid ABC transporter permease; inner-membrane translocator complement(3301050..3302114) Rhodopseudomonas palustris DX-1 10065328 YP_004109414.1 CDS Rpdx1_3101 NC_014834.1 3302126 3302998 R PFAM: inner-membrane translocator; KEGG: bbt:BBta_3203 branched chain amino acid ABC transporter permease; inner-membrane translocator complement(3302126..3302998) Rhodopseudomonas palustris DX-1 10065329 YP_004109415.1 CDS Rpdx1_3102 NC_014834.1 3303116 3304354 R KEGG: bra:BRADO4858 putative aliphatic amidase expression-regulating protein, AmiC; TIGRFAM: urea ABC transporter, substrate-binding protein; PFAM: Extracellular ligand-binding receptor; urea ABC transporter substrate-binding protein complement(3303116..3304354) Rhodopseudomonas palustris DX-1 10065330 YP_004109416.1 CDS Rpdx1_3103 NC_014834.1 3304366 3305031 R PFAM: ANTAR domain protein; KEGG: bra:BRADO4859 hypothetical protein; response regulator receiver and ANTAR domain-containing protein complement(3304366..3305031) Rhodopseudomonas palustris DX-1 10065331 YP_004109417.1 CDS Rpdx1_3104 NC_014834.1 3305028 3306185 R KEGG: bbt:BBta_3200 putative aliphatic amidase expression-regulating protein, AmiC; putative aliphatic amidase expression-regulating protein, AmiC complement(3305028..3306185) Rhodopseudomonas palustris DX-1 10065332 YP_004109418.1 CDS Rpdx1_3105 NC_014834.1 3306581 3306916 D KEGG: bja:blr5534 hypothetical protein; hypothetical protein 3306581..3306916 Rhodopseudomonas palustris DX-1 10065333 YP_004109419.1 CDS Rpdx1_3106 NC_014834.1 3307179 3307298 D hypothetical protein 3307179..3307298 Rhodopseudomonas palustris DX-1 10065334 YP_004109420.1 CDS Rpdx1_3107 NC_014834.1 3307636 3308526 R TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; KEGG: mag:amb1576 ADP-ribosyl-[dinitrogen reductase] glycohydrolase; PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosyl-(dinitrogen reductase) hydrolase complement(3307636..3308526) Rhodopseudomonas palustris DX-1 10065335 YP_004109421.1 CDS Rpdx1_3108 NC_014834.1 3308538 3309347 R KEGG: mag:amb1575 NAD(+)-dinitrogen-reductase ADP-D-ribosyltransferase; PFAM: Dinitrogenase reductase ADP-ribosyltransferase; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase complement(3308538..3309347) Rhodopseudomonas palustris DX-1 10065336 YP_004109422.1 CDS Rpdx1_3109 NC_014834.1 3309501 3310505 R KEGG: bja:blr7666 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(3309501..3310505) Rhodopseudomonas palustris DX-1 10065337 YP_004109423.1 CDS Rpdx1_3110 NC_014834.1 3311284 3313602 D KEGG: rru:Rru_A0828 CRISPR-associated helicase Cas3 family protein protein; TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; SMART: DEAD-like helicase; CRISPR-associated HD domain-containing protein 3311284..3313602 Rhodopseudomonas palustris DX-1 10065339 YP_004109424.1 CDS Rpdx1_3112 NC_014834.1 3314398 3314997 D KEGG: lif:LinJ27.0410 calpain-like cysteine peptidase; hypothetical protein 3314398..3314997 Rhodopseudomonas palustris DX-1 10065341 YP_004109425.1 CDS Rpdx1_3113 NC_014834.1 3314994 3316754 D KEGG: rru:Rru_A0830 CRISPR-associated RAMP Csd1 family protein; TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133; Csd1 family CRISPR-associated protein 3314994..3316754 Rhodopseudomonas palustris DX-1 10065342 YP_004109426.1 CDS Rpdx1_3114 NC_014834.1 3316751 3317704 D KEGG: rru:Rru_A0831 CRISPR-associated Csd2 family protein; TIGRFAM: CRISPR-associated protein, Csd2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801; protein Csd2 family protein 3316751..3317704 Rhodopseudomonas palustris DX-1 10065343 YP_004109427.1 CDS Rpdx1_3115 NC_014834.1 3317722 3318393 D TIGRFAM: CRISPR-associated protein Cas4; KEGG: rru:Rru_A0832 CRISPR-associated exonuclease Cas4 family protein; CRISPR-associated protein Cas4 3317722..3318393 Rhodopseudomonas palustris DX-1 10065344 YP_004109428.1 CDS Rpdx1_3116 NC_014834.1 3318390 3319424 D KEGG: nwi:Nwi_1936 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated protein Cas1 3318390..3319424 Rhodopseudomonas palustris DX-1 10065345 YP_004109429.1 CDS Rpdx1_3117 NC_014834.1 3319545 3319835 D TIGRFAM: CRISPR-associated protein Cas2; KEGG: rsk:RSKD131_1963 CRISPR-associated protein, Cas2 family; CRISPR-associated protein Cas2 3319545..3319835 Rhodopseudomonas palustris DX-1 10065346 YP_004109430.1 CDS Rpdx1_3118 NC_014834.1 3323722 3325743 D KEGG: rce:RC1_0319 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; anaerobic ribonucleoside-triphosphate reductase 3323722..3325743 Rhodopseudomonas palustris DX-1 10065347 YP_004109431.1 CDS Rpdx1_3119 NC_014834.1 3325761 3325952 D KEGG: pde:Pden_2988 hypothetical protein; hypothetical protein 3325761..3325952 Rhodopseudomonas palustris DX-1 10065348 YP_004109432.1 CDS Rpdx1_3120 NC_014834.1 3325909 3326541 D KEGG: rce:RC1_0317 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; anaerobic ribonucleoside-triphosphate reductase activating protein 3325909..3326541 Rhodopseudomonas palustris DX-1 10065349 YP_004109433.1 CDS Rpdx1_3121 NC_014834.1 3326957 3328582 D KEGG: avn:Avin_49020 sigma54-dependent transcriptional activator for the iron only nitrogenase, AnfA; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase; NifA subfamily transcriptional regulator 3326957..3328582 Rhodopseudomonas palustris DX-1 10065350 YP_004109434.1 CDS Rpdx1_3122 NC_014834.1 3329110 3329937 D TIGRFAM: nitrogenase iron protein; KEGG: anfH; nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein 3329110..3329937 Rhodopseudomonas palustris DX-1 10065351 YP_004109435.1 CDS Rpdx1_3123 NC_014834.1 3329987 3331555 D TIGRFAM: nitrogenase iron-iron protein, alpha chain; nitrogenase alpha chain; nitrogenase component I, alpha chain; KEGG: cts:Ctha_1831 nitrogenase alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase iron-iron protein subunit alpha 3329987..3331555 Rhodopseudomonas palustris DX-1 10065352 YP_004109436.1 CDS Rpdx1_3124 NC_014834.1 3331568 3332008 D TIGRFAM: Fe-only nitrogenase, delta subunit; KEGG: rru:Rru_A1393 nitrogenase; PFAM: Vanadium/alternative nitrogenase delta subunit; Fe-only nitrogenase subunit delta 3331568..3332008 Rhodopseudomonas palustris DX-1 10065353 YP_004109437.1 CDS Rpdx1_3125 NC_014834.1 3332022 3333407 D KEGG: rru:Rru_A1392 nitrogenase; TIGRFAM: Fe-only nitrogenase, beta subunit; PFAM: oxidoreductase/nitrogenase component 1; Fe-only nitrogenase subunit beta 3332022..3333407 Rhodopseudomonas palustris DX-1 10065354 YP_004109438.1 CDS Rpdx1_3126 NC_014834.1 3333442 3334182 D KEGG: avn:Avin_48960 Fe-only nitrogenase accessory protein AnfO; TIGRFAM: Fe-only nitrogenase accessory protein AnfO; PFAM: Nitrogenase iron-iron accessory protein AnfO; Fe-only nitrogenase accessory protein AnfO 3333442..3334182 Rhodopseudomonas palustris DX-1 10065355 YP_004109439.1 CDS Rpdx1_3127 NC_014834.1 3334179 3334769 D KEGG: rru:Rru_A1390 hypothetical protein; hypothetical protein 3334179..3334769 Rhodopseudomonas palustris DX-1 10065356 YP_004109440.1 CDS Rpdx1_3128 NC_014834.1 3334827 3335357 D KEGG: cts:Ctha_1834 putative nitroimidazole resistance protein; putative nitroimidazole resistance protein 3334827..3335357 Rhodopseudomonas palustris DX-1 10065357 YP_004109441.1 CDS Rpdx1_3129 NC_014834.1 3335529 3336362 R manually curated; KEGG: mca:MCA1828 dinitrogenase reductase ADP-ribosyltransferase-like protein; PFAM: Dinitrogenase reductase ADP-ribosyltransferase; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase complement(3335529..3336362) Rhodopseudomonas palustris DX-1 10065358 YP_004109442.1 CDS Rpdx1_3130 NC_014834.1 3336595 3337140 R PFAM: GCN5-related N-acetyltransferase; KEGG: bay:RBAM_024110 YrkN; N-acetyltransferase GCN5 complement(3336595..3337140) Rhodopseudomonas palustris DX-1 10065359 YP_004109443.1 CDS Rpdx1_3131 NC_014834.1 3337185 3338849 R KEGG: xau:Xaut_2451 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein complement(3337185..3338849) Rhodopseudomonas palustris DX-1 10065360 YP_004109444.1 CDS Rpdx1_3132 NC_014834.1 3338924 3342091 R KEGG: ara:Arad_9281 multidrug efflux transporter protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3338924..3342091) Rhodopseudomonas palustris DX-1 10065361 YP_004109445.1 CDS Rpdx1_3133 NC_014834.1 3342088 3343305 R KEGG: ara:Arad_4545 protein secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3342088..3343305) Rhodopseudomonas palustris DX-1 10065362 YP_004109446.1 CDS Rpdx1_3134 NC_014834.1 3343618 3343944 D KEGG: rlt:Rleg2_2361 hypothetical protein; hypothetical protein 3343618..3343944 Rhodopseudomonas palustris DX-1 10065363 YP_004109447.1 CDS Rpdx1_3135 NC_014834.1 3344017 3344703 D KEGG: bja:bll3559 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 3344017..3344703 Rhodopseudomonas palustris DX-1 10065364 YP_004109448.1 CDS Rpdx1_3136 NC_014834.1 3344700 3345833 D KEGG: bja:bll3558 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3344700..3345833 Rhodopseudomonas palustris DX-1 10065365 YP_004109449.1 CDS Rpdx1_3137 NC_014834.1 3345957 3347228 R PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xau:Xaut_1514 flavocytochrome c sulphide dehydrogenase flavin-binding; flavocytochrome c sulfide dehydrogenase flavin-binding protein complement(3345957..3347228) Rhodopseudomonas palustris DX-1 10065366 YP_004109450.1 CDS Rpdx1_3138 NC_014834.1 3347289 3348554 R PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xau:Xaut_1514 flavocytochrome c sulphide dehydrogenase flavin-binding; flavocytochrome c sulfide dehydrogenase flavin-binding protein complement(3347289..3348554) Rhodopseudomonas palustris DX-1 10065367 YP_004109451.1 CDS Rpdx1_3139 NC_014834.1 3348589 3349008 R KEGG: sil:SPO1000 diheme cytochrome c SoxE; hypothetical protein complement(3348589..3349008) Rhodopseudomonas palustris DX-1 10065368 YP_004109452.1 CDS Rpdx1_3140 NC_014834.1 3349048 3350160 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dar:Daro_3126 YeeE/YedE; hypothetical protein complement(3349048..3350160) Rhodopseudomonas palustris DX-1 10065369 YP_004109453.1 CDS Rpdx1_3141 NC_014834.1 3350371 3351126 R KEGG: bra:BRADO3185 putative sulfite oxidase cytochrome subunit (SoxD); putative sulfite oxidase cytochrome subunit SoxD complement(3350371..3351126) Rhodopseudomonas palustris DX-1 10065370 YP_004109454.1 CDS Rpdx1_3142 NC_014834.1 3351110 3352402 R PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: xau:Xaut_1518 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin-binding protein complement(3351110..3352402) Rhodopseudomonas palustris DX-1 10065371 YP_004109455.1 CDS Rpdx1_3143 NC_014834.1 3352472 3354169 R PFAM: 5'-Nucleotidase domain protein; KEGG: xau:Xaut_1519 5'-nucleotidase domain-containing protein; 5'-nucleotidase domain-containing protein complement(3352472..3354169) Rhodopseudomonas palustris DX-1 10065372 YP_004109456.1 CDS Rpdx1_3144 NC_014834.1 3354313 3354642 R PFAM: Sulphur oxidation protein SoxZ; KEGG: xau:Xaut_1520 sulphur oxidation protein SoxZ; sulfur oxidation protein SoxZ complement(3354313..3354642) Rhodopseudomonas palustris DX-1 10065373 YP_004109457.1 CDS Rpdx1_3145 NC_014834.1 3354680 3355144 R KEGG: xau:Xaut_1521 sulfur oxidation protein SoxY; sulfur oxidation protein SoxY complement(3354680..3355144) Rhodopseudomonas palustris DX-1 10065374 YP_004109458.1 CDS Rpdx1_3146 NC_014834.1 3355327 3356148 D KEGG: xau:Xaut_1522 hypothetical protein; hypothetical protein 3355327..3356148 Rhodopseudomonas palustris DX-1 10065375 YP_004109459.1 CDS Rpdx1_3147 NC_014834.1 3356161 3356898 D KEGG: xau:Xaut_1523 hypothetical protein; hypothetical protein 3356161..3356898 Rhodopseudomonas palustris DX-1 10065376 YP_004109460.1 CDS Rpdx1_3148 NC_014834.1 3356921 3357424 D PFAM: protein of unknown function DUF336; KEGG: mea:Mex_1p2555 hypothetical protein; hypothetical protein 3356921..3357424 Rhodopseudomonas palustris DX-1 10065377 YP_004109461.1 CDS Rpdx1_3149 NC_014834.1 3357562 3358152 R KEGG: bja:blr3510 thioredoxin; thioredoxin complement(3357562..3358152) Rhodopseudomonas palustris DX-1 10065378 YP_004109462.1 CDS Rpdx1_3150 NC_014834.1 3358181 3358924 R PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mdi:METDI0762 sulfur oxidation V protein, cytochrome c-type biogenesis protein; cytochrome c biogenesis transmembrane protein complement(3358181..3358924) Rhodopseudomonas palustris DX-1 10065379 YP_004109463.1 CDS Rpdx1_3151 NC_014834.1 3358981 3359385 D KEGG: xau:Xaut_1526 hypothetical protein; hypothetical protein 3358981..3359385 Rhodopseudomonas palustris DX-1 10065380 YP_004109464.1 CDS Rpdx1_3152 NC_014834.1 3359454 3359828 D KEGG: xau:Xaut_1527 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 3359454..3359828 Rhodopseudomonas palustris DX-1 10065381 YP_004109465.1 CDS Rpdx1_3153 NC_014834.1 3359905 3361104 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: xau:Xaut_1528 protein of unknown function DUF395 YeeE/YedE; hypothetical protein 3359905..3361104 Rhodopseudomonas palustris DX-1 10065382 YP_004109466.1 CDS Rpdx1_3154 NC_014834.1 3361019 3361471 R KEGG: bra:BRADO1133 YchN-like; hypothetical protein complement(3361019..3361471) Rhodopseudomonas palustris DX-1 10065383 YP_004109467.1 CDS Rpdx1_3155 NC_014834.1 3361706 3362761 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: oca:OCAR_5191 possible membrane protein with ATP/GTP-binding site motif A; hypothetical protein complement(3361706..3362761) Rhodopseudomonas palustris DX-1 10065384 YP_004109468.1 CDS Rpdx1_3156 NC_014834.1 3363154 3364044 R PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: oan:Oant_1901 siderophore-interacting protein; Siderophore-interacting protein complement(3363154..3364044) Rhodopseudomonas palustris DX-1 10065385 YP_004109469.1 CDS Rpdx1_3157 NC_014834.1 3364047 3364874 R KEGG: gau:GAU_3226 putative iron ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3364047..3364874) Rhodopseudomonas palustris DX-1 10065386 YP_004109470.1 CDS Rpdx1_3158 NC_014834.1 3364871 3365929 R PFAM: transport system permease protein; KEGG: gau:GAU_3227 putative iron ABC transporter permease; transporter permease complement(3364871..3365929) Rhodopseudomonas palustris DX-1 10065387 YP_004109471.1 CDS Rpdx1_3159 NC_014834.1 3365926 3367092 R KEGG: pfl:PFL_3500 solute-binding periplasmic protein of iron/siderophore ABC transporter; solute-binding periplasmic protein of iron/siderophore ABC transporter complement(3365926..3367092) Rhodopseudomonas palustris DX-1 10065388 YP_004109472.1 CDS Rpdx1_3160 NC_014834.1 3367122 3368057 R PFAM: putative esterase; KEGG: bay:RBAM_029060 YuiI; putative esterase complement(3367122..3368057) Rhodopseudomonas palustris DX-1 10065389 YP_004109473.1 CDS Rpdx1_3161 NC_014834.1 3368067 3370448 R KEGG: ara:Arad_9688 ferrichrome-iron transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor complement(3368067..3370448) Rhodopseudomonas palustris DX-1 10065390 YP_004109474.1 CDS Rpdx1_3162 NC_014834.1 3370640 3372733 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: oan:Oant_4087 TonB-dependent receptor; TonB-dependent receptor complement(3370640..3372733) Rhodopseudomonas palustris DX-1 10065391 YP_004109475.1 CDS Rpdx1_3163 NC_014834.1 3373033 3374028 D KEGG: hch:HCH_01309 AraC-type DNA-binding domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3373033..3374028 Rhodopseudomonas palustris DX-1 10065392 YP_004109476.1 CDS Rpdx1_3164 NC_014834.1 3374496 3375497 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sme:SM_b20636 putative transposase of insertion sequence ISRm19 protein; transposase IS116/IS110/IS902 family protein 3374496..3375497 Rhodopseudomonas palustris DX-1 10065393 YP_004109477.1 CDS Rpdx1_3165 NC_014834.1 3375717 3376481 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB2681 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3375717..3376481) Rhodopseudomonas palustris DX-1 10065394 YP_004109478.1 CDS Rpdx1_3166 NC_014834.1 3376478 3378016 R PFAM: AMP-dependent synthetase and ligase; KEGG: azc:AZC_2772 AMP-dependent synthetase; AMP-dependent synthetase and ligase complement(3376478..3378016) Rhodopseudomonas palustris DX-1 10065395 YP_004109479.1 CDS Rpdx1_3167 NC_014834.1 3378013 3379044 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ttr:Tter_0818 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(3378013..3379044) Rhodopseudomonas palustris DX-1 10065396 YP_004109480.1 CDS Rpdx1_3168 NC_014834.1 3379022 3380026 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mrd:Mrad2831_4369 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(3379022..3380026) Rhodopseudomonas palustris DX-1 10065397 YP_004109481.1 CDS Rpdx1_3169 NC_014834.1 3380028 3380885 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3318 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(3380028..3380885) Rhodopseudomonas palustris DX-1 10065398 YP_004109482.1 CDS Rpdx1_3170 NC_014834.1 3380889 3381857 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2651 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component complement(3380889..3381857) Rhodopseudomonas palustris DX-1 10065399 YP_004109483.1 CDS Rpdx1_3171 NC_014834.1 3381878 3383485 R PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_1982 putative ABC transporter, periplasmic binding protein; family 5 extracellular solute-binding protein complement(3381878..3383485) Rhodopseudomonas palustris DX-1 10065400 YP_004109484.1 CDS Rpdx1_3172 NC_014834.1 3383561 3383995 R PFAM: thioesterase superfamily protein; KEGG: bbr:BB1176 hypothetical protein; thioesterase superfamily protein complement(3383561..3383995) Rhodopseudomonas palustris DX-1 10065401 YP_004109485.1 CDS Rpdx1_3173 NC_014834.1 3383992 3385005 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbr:BB0342 zinc-binding dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(3383992..3385005) Rhodopseudomonas palustris DX-1 10065402 YP_004109486.1 CDS Rpdx1_3174 NC_014834.1 3385070 3385936 R KEGG: azc:AZC_2262 hypothetical protein; hypothetical protein complement(3385070..3385936) Rhodopseudomonas palustris DX-1 10065403 YP_004109487.1 CDS Rpdx1_3175 NC_014834.1 3386159 3387328 R TIGRFAM: amidohydrolase; KEGG: oan:Oant_3314 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase complement(3386159..3387328) Rhodopseudomonas palustris DX-1 10065404 YP_004109488.1 CDS Rpdx1_3176 NC_014834.1 3387407 3388582 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: svi:Svir_03020 cysteine synthase; pyridoxal-5'-phosphate-dependent protein subunit beta complement(3387407..3388582) Rhodopseudomonas palustris DX-1 10065405 YP_004109489.1 CDS Rpdx1_3177 NC_014834.1 3388825 3389292 D KEGG: sil:SPO3179 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 3388825..3389292 Rhodopseudomonas palustris DX-1 10065406 YP_004109490.1 CDS Rpdx1_3178 NC_014834.1 3389678 3389953 D KEGG: nwi:Nwi_2907 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 3389678..3389953 Rhodopseudomonas palustris DX-1 10065407 YP_004109491.1 CDS Rpdx1_3179 NC_014834.1 3389968 3390306 D KEGG: aeh:Mlg_1777 hypothetical protein; hypothetical protein 3389968..3390306 Rhodopseudomonas palustris DX-1 10065408 YP_004109492.1 CDS Rpdx1_3180 NC_014834.1 3390485 3391006 R KEGG: nwi:Nwi_2303 fec I like protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; ECF subfamily RNA polymerase sigma-24 subunit complement(3390485..3391006) Rhodopseudomonas palustris DX-1 10065409 YP_004109493.1 CDS Rpdx1_3181 NC_014834.1 3391279 3393060 D PFAM: IucA/IucC family protein; KEGG: nwi:Nwi_2302 siderophore synthetase component; IucA/IucC family protein 3391279..3393060 Rhodopseudomonas palustris DX-1 10065410 YP_004109494.1 CDS Rpdx1_3182 NC_014834.1 3393044 3394774 D PFAM: IucA/IucC family protein; KEGG: nwi:Nwi_2301 siderophore synthetase component; IucA/IucC family protein 3393044..3394774 Rhodopseudomonas palustris DX-1 10065411 YP_004109495.1 CDS Rpdx1_3183 NC_014834.1 3394771 3396036 D PFAM: AMP-dependent synthetase and ligase; KEGG: nwi:Nwi_2300 acyl-CoA synthetase; AMP-dependent synthetase and ligase 3394771..3396036 Rhodopseudomonas palustris DX-1 10065412 YP_004109496.1 CDS Rpdx1_3184 NC_014834.1 3396033 3397346 D KEGG: nwi:Nwi_2299 hypothetical protein; hypothetical protein 3396033..3397346 Rhodopseudomonas palustris DX-1 10065413 YP_004109497.1 CDS Rpdx1_3185 NC_014834.1 3397343 3398245 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: nwi:Nwi_2298 xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 3397343..3398245 Rhodopseudomonas palustris DX-1 10065414 YP_004109498.1 CDS Rpdx1_3186 NC_014834.1 3398260 3399165 D PFAM: periplasmic binding protein; KEGG: rsp:RSP_3079 ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein; periplasmic-binding protein 3398260..3399165 Rhodopseudomonas palustris DX-1 10065415 YP_004109499.1 CDS Rpdx1_3187 NC_014834.1 3399162 3400139 D PFAM: transport system permease protein; KEGG: rsp:RSP_3220 ABC ferric siderophore transporter, inner membrane subunit; transporter permease 3399162..3400139 Rhodopseudomonas palustris DX-1 10065416 YP_004109500.1 CDS Rpdx1_3188 NC_014834.1 3400132 3401082 D PFAM: transport system permease protein; KEGG: atc:AGR_C_4491 ferrichrome ABC transporter (permease) homolog; transporter permease 3400132..3401082 Rhodopseudomonas palustris DX-1 10065417 YP_004109501.1 CDS Rpdx1_3189 NC_014834.1 3401079 3401837 D KEGG: rsh:Rsph17029_3961 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3401079..3401837 Rhodopseudomonas palustris DX-1 10065418 YP_004109502.1 CDS Rpdx1_3190 NC_014834.1 3401952 3402950 D PFAM: FecR protein; KEGG: nwi:Nwi_2297 FecR protein; anti-FecI sigma factor FecR 3401952..3402950 Rhodopseudomonas palustris DX-1 10065419 YP_004109503.1 CDS Rpdx1_3191 NC_014834.1 3403047 3405311 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: nwi:Nwi_2296 TonB-dependent receptor; TonB-dependent receptor 3403047..3405311 Rhodopseudomonas palustris DX-1 10065420 YP_004109504.1 CDS Rpdx1_3192 NC_014834.1 3405423 3405920 D PFAM: GCN5-related N-acetyltransferase; KEGG: nwi:Nwi_2295 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3405423..3405920 Rhodopseudomonas palustris DX-1 10065421 YP_004109505.1 CDS Rpdx1_3193 NC_014834.1 3406215 3408533 D KEGG: nwi:Nwi_2294 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 3406215..3408533 Rhodopseudomonas palustris DX-1 10065422 YP_004109506.1 CDS Rpdx1_3194 NC_014834.1 3408648 3408950 D PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_2293 hypothetical protein; hypothetical protein 3408648..3408950 Rhodopseudomonas palustris DX-1 10065423 YP_004109507.1 CDS Rpdx1_3195 NC_014834.1 3409092 3409961 R PFAM: UspA domain protein; KEGG: pla:Plav_3480 UspA domain-containing protein; UspA domain-containing protein complement(3409092..3409961) Rhodopseudomonas palustris DX-1 10065424 YP_004109508.1 CDS Rpdx1_3196 NC_014834.1 3410202 3411638 R PFAM: Citrate transporter; KEGG: aeh:Mlg_1768 citrate transporter; citrate transporter complement(3410202..3411638) Rhodopseudomonas palustris DX-1 10065425 YP_004109509.1 CDS Rpdx1_3197 NC_014834.1 3411684 3414407 R KEGG: nar:Saro_0399 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; HAD superfamily P-type ATPase complement(3411684..3414407) Rhodopseudomonas palustris DX-1 10065426 YP_004109510.1 CDS Rpdx1_3198 NC_014834.1 3414442 3414633 R KEGG: pat:Patl_2284 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(3414442..3414633) Rhodopseudomonas palustris DX-1 10065427 YP_004109511.1 CDS Rpdx1_3199 NC_014834.1 3414890 3415579 R PFAM: protein of unknown function DUF502; KEGG: eba:ebA5013 hypothetical protein; hypothetical protein complement(3414890..3415579) Rhodopseudomonas palustris DX-1 10065428 YP_004109512.1 CDS Rpdx1_3200 NC_014834.1 3415734 3416258 D PFAM: cation antiporter; KEGG: msl:Msil_1032 hypothetical protein; cation antiporter 3415734..3416258 Rhodopseudomonas palustris DX-1 10065429 YP_004109513.1 CDS Rpdx1_3201 NC_014834.1 3416255 3416539 D KEGG: msl:Msil_1033 hypothetical protein; hypothetical protein 3416255..3416539 Rhodopseudomonas palustris DX-1 10065430 YP_004109514.1 CDS Rpdx1_3202 NC_014834.1 3416536 3416859 D PFAM: Na+/H+ antiporter subunit; KEGG: hha:Hhal_0816 putative monovalent cation/H+ antiporter subunit G; Na+/H+ antiporter subunit 3416536..3416859 Rhodopseudomonas palustris DX-1 10065431 YP_004109515.1 CDS Rpdx1_3203 NC_014834.1 3416856 3417797 D PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: bja:blr7318 hypothetical protein; Na+/H+ antiporter MnhB subunit-like protein 3416856..3417797 Rhodopseudomonas palustris DX-1 10065432 YP_004109516.1 CDS Rpdx1_3204 NC_014834.1 3417794 3418123 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: msl:Msil_1036 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 3417794..3418123 Rhodopseudomonas palustris DX-1 10065433 YP_004109517.1 CDS Rpdx1_3205 NC_014834.1 3418104 3419624 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: msl:Msil_1037 NADH dehydrogenase (quinone); NADH/ubiquinone/plastoquinone 3418104..3419624 Rhodopseudomonas palustris DX-1 10065434 YP_004109518.1 CDS Rpdx1_3206 NC_014834.1 3419621 3421096 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sfr:Sfri_2742 NADH dehydrogenase (quinone); NADH/ubiquinone/plastoquinone 3419621..3421096 Rhodopseudomonas palustris DX-1 10065435 YP_004109519.1 CDS Rpdx1_3207 NC_014834.1 3421093 3422766 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: xau:Xaut_1581 NADH/ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone 3421093..3422766 Rhodopseudomonas palustris DX-1 10065436 YP_004109520.1 CDS Rpdx1_3208 NC_014834.1 3422794 3425949 R KEGG: pmy:Pmen_0826 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3422794..3425949) Rhodopseudomonas palustris DX-1 10065437 YP_004109521.1 CDS Rpdx1_3209 NC_014834.1 3425949 3427160 R KEGG: oan:Oant_0375 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3425949..3427160) Rhodopseudomonas palustris DX-1 10065438 YP_004109522.1 CDS Rpdx1_3210 NC_014834.1 3427469 3430057 D PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; KEGG: xca:xccb100_1109 quinoprotein glucose dehydrogenase; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; quinate dehydrogenase 3427469..3430057 Rhodopseudomonas palustris DX-1 10065439 YP_004109523.1 CDS Rpdx1_3211 NC_014834.1 3430149 3430820 R PFAM: ferric-uptake regulator; KEGG: oca:OCAR_4496 ferric uptake regulator, FUR family; Fur family ferric uptake regulator complement(3430149..3430820) Rhodopseudomonas palustris DX-1 10065440 YP_004109524.1 CDS Rpdx1_3212 NC_014834.1 3431064 3431567 D KEGG: eba:ebA616 hypothetical protein; hypothetical protein 3431064..3431567 Rhodopseudomonas palustris DX-1 10065441 YP_004109525.1 CDS Rpdx1_3213 NC_014834.1 3431575 3431901 D KEGG: eba:ebB16 hypothetical protein; hypothetical protein 3431575..3431901 Rhodopseudomonas palustris DX-1 10065442 YP_004109526.1 CDS Rpdx1_3214 NC_014834.1 3431921 3432247 D KEGG: avn:Avin_22680 hypothetical protein; hypothetical protein 3431921..3432247 Rhodopseudomonas palustris DX-1 10065443 YP_004109527.1 CDS Rpdx1_3215 NC_014834.1 3432234 3432575 D KEGG: avn:Avin_22690 hypothetical protein; hypothetical protein 3432234..3432575 Rhodopseudomonas palustris DX-1 10065444 YP_004109528.1 CDS Rpdx1_3216 NC_014834.1 3432568 3432903 D KEGG: avn:Avin_22700 hypothetical protein; hypothetical protein 3432568..3432903 Rhodopseudomonas palustris DX-1 10065445 YP_004109529.1 CDS Rpdx1_3217 NC_014834.1 3432900 3435029 D KEGG: eba:ebA609 putative cation transport ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase 3432900..3435029 Rhodopseudomonas palustris DX-1 10065446 YP_004109530.1 CDS Rpdx1_3218 NC_014834.1 3435023 3435499 R KEGG: mdi:METDI4458 hypothetical protein; hypothetical protein complement(3435023..3435499) Rhodopseudomonas palustris DX-1 10065447 YP_004109531.1 CDS Rpdx1_3219 NC_014834.1 3435496 3436146 R KEGG: bja:blr4686 hypothetical protein; hypothetical protein complement(3435496..3436146) Rhodopseudomonas palustris DX-1 10065448 YP_004109532.1 CDS Rpdx1_3220 NC_014834.1 3436557 3437243 R PFAM: regulatory protein TetR; KEGG: bja:blr4685 transcriptional regulatory protein; regulatory protein TetR complement(3436557..3437243) Rhodopseudomonas palustris DX-1 10065449 YP_004109533.1 CDS Rpdx1_3221 NC_014834.1 3437401 3438060 D KEGG: tmz:Tmz1t_2068 hypothetical protein; hypothetical protein 3437401..3438060 Rhodopseudomonas palustris DX-1 10065450 YP_004109534.1 CDS Rpdx1_3222 NC_014834.1 3438360 3439781 D KEGG: azc:AZC_4654 sensor protein FixL; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; multi-sensor signal transduction histidine kinase 3438360..3439781 Rhodopseudomonas palustris DX-1 10065451 YP_004109535.1 CDS Rpdx1_3223 NC_014834.1 3439766 3442045 R KEGG: nha:Nham_2169 adenylate/guanylate cyclase; PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase with Chase sensor complement(3439766..3442045) Rhodopseudomonas palustris DX-1 10065452 YP_004109536.1 CDS Rpdx1_3224 NC_014834.1 3442197 3442622 D KEGG: sro:Sros_2899 hypothetical protein; hypothetical protein 3442197..3442622 Rhodopseudomonas palustris DX-1 10065453 YP_004109537.1 CDS Rpdx1_3225 NC_014834.1 3442652 3444352 R KEGG: nwi:Nwi_1759 hypothetical protein; hypothetical protein complement(3442652..3444352) Rhodopseudomonas palustris DX-1 10065454 YP_004109538.1 CDS Rpdx1_3226 NC_014834.1 3444364 3445671 R KEGG: nha:Nham_2170 tetratricopeptide TPR_2; tetratricopeptide-repeat containing protein complement(3444364..3445671) Rhodopseudomonas palustris DX-1 10065455 YP_004109539.1 CDS Rpdx1_3227 NC_014834.1 3445986 3446459 D PFAM: Polyketide cyclase/dehydrase; KEGG: fal:FRAAL3046 hypothetical protein; polyketide cyclase/dehydrase 3445986..3446459 Rhodopseudomonas palustris DX-1 10065456 YP_004109540.1 CDS Rpdx1_3228 NC_014834.1 3446471 3447901 R KEGG: hypothetical protein; hypothetical protein complement(3446471..3447901) Rhodopseudomonas palustris DX-1 10065457 YP_004109541.1 CDS Rpdx1_3229 NC_014834.1 3448663 3450288 R KEGG: bra:BRADO3737 peptide chain release factor RF-3; GTP-binding factor; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; peptide chain release factor 3 complement(3448663..3450288) Rhodopseudomonas palustris DX-1 10065458 YP_004109542.1 CDS Rpdx1_3230 NC_014834.1 3450519 3450833 D PFAM: small multidrug resistance protein; KEGG: nha:Nham_1679 small multidrug resistance protein; small multidrug resistance protein 3450519..3450833 Rhodopseudomonas palustris DX-1 10065459 YP_004109543.1 CDS Rpdx1_3231 NC_014834.1 3450870 3451880 R PFAM: phosphate transporter; KEGG: nwi:Nwi_2031 phosphate transporter; phosphate transporter complement(3450870..3451880) Rhodopseudomonas palustris DX-1 10065460 YP_004109544.1 CDS Rpdx1_3232 NC_014834.1 3451895 3452539 R PFAM: Putitive phosphate transport regulator; KEGG: bbt:BBta_3760 putative low-affinity phosphate transport accessory protein; putative phosphate transport regulator complement(3451895..3452539) Rhodopseudomonas palustris DX-1 10065461 YP_004109545.1 CDS Rpdx1_3233 NC_014834.1 3453105 3455756 D KEGG: pcs:Pc22g03720 Pc22g03720; hypothetical protein 3453105..3455756 Rhodopseudomonas palustris DX-1 10065462 YP_004109546.1 CDS Rpdx1_3234 NC_014834.1 3455914 3456885 R PFAM: inner-membrane translocator; KEGG: bbt:BBta_3759 hypothetical protein; inner-membrane translocator complement(3455914..3456885) Rhodopseudomonas palustris DX-1 10065463 YP_004109547.1 CDS Rpdx1_3235 NC_014834.1 3456887 3457762 R PFAM: inner-membrane translocator; KEGG: bra:BRADO3733 putative ABC transporter, permease protein; putative branched-chain amino acid transport permease; inner-membrane translocator complement(3456887..3457762) Rhodopseudomonas palustris DX-1 10065464 YP_004109548.1 CDS Rpdx1_3236 NC_014834.1 3457802 3458548 R KEGG: nha:Nham_1673 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3457802..3458548) Rhodopseudomonas palustris DX-1 10065465 YP_004109549.1 CDS Rpdx1_3237 NC_014834.1 3458541 3459311 R KEGG: bja:blr4037 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3458541..3459311) Rhodopseudomonas palustris DX-1 10065466 YP_004109550.1 CDS Rpdx1_3238 NC_014834.1 3459517 3459864 R PFAM: arsenate reductase and related; KEGG: nha:Nham_1671 hypothetical protein; arsenate reductase-like protein complement(3459517..3459864) Rhodopseudomonas palustris DX-1 10065467 YP_004109551.1 CDS Rpdx1_3239 NC_014834.1 3460081 3461595 D KEGG: rce:RC1_2401 pyruvate kinase; PFAM: Pyruvate kinase barrel; pyruvate kinase 3460081..3461595 Rhodopseudomonas palustris DX-1 10065468 YP_004109552.1 CDS Rpdx1_3241 NC_014834.1 3462126 3462275 D KEGG: bpt:Bpet2957 hypothetical protein; hypothetical protein 3462126..3462275 Rhodopseudomonas palustris DX-1 10065470 YP_004109553.1 CDS Rpdx1_3242 NC_014834.1 3462453 3464255 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: atc:AGR_L_284 flavin-containing monooxygenase, putative; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3462453..3464255 Rhodopseudomonas palustris DX-1 10065471 YP_004109554.1 CDS Rpdx1_3243 NC_014834.1 3464361 3464639 D KEGG: nwi:Nwi_3083 transcriptional regulator AbrB; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator 3464361..3464639 Rhodopseudomonas palustris DX-1 10065472 YP_004109555.1 CDS Rpdx1_3244 NC_014834.1 3464682 3465242 R PFAM: flavin reductase domain protein FMN-binding; KEGG: bbt:BBta_7416 hypothetical protein; flavin reductase FMN-binding protein complement(3464682..3465242) Rhodopseudomonas palustris DX-1 10065473 YP_004109556.1 CDS Rpdx1_3245 NC_014834.1 3465306 3465749 R KEGG: azl:AZL_a04400 hypothetical protein; hypothetical protein complement(3465306..3465749) Rhodopseudomonas palustris DX-1 10065474 YP_004109557.1 CDS Rpdx1_3246 NC_014834.1 3466195 3466986 D KEGG: pde:Pden_3149 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 3466195..3466986 Rhodopseudomonas palustris DX-1 10065475 YP_004109558.1 CDS Rpdx1_3247 NC_014834.1 3467162 3467713 D KEGG: rce:RC1_3304 hypothetical protein; hypothetical protein 3467162..3467713 Rhodopseudomonas palustris DX-1 10065476 YP_004109559.1 CDS Rpdx1_3248 NC_014834.1 3467796 3468200 R KEGG: azc:AZC_1293 hypothetical protein; hypothetical protein complement(3467796..3468200) Rhodopseudomonas palustris DX-1 10065477 YP_004109560.1 CDS Rpdx1_3249 NC_014834.1 3468232 3468627 R KEGG: rsp:RSP_4279 hypothetical protein; hypothetical protein complement(3468232..3468627) Rhodopseudomonas palustris DX-1 10065478 YP_004109561.1 CDS Rpdx1_3250 NC_014834.1 3468781 3469665 D KEGG: azc:AZC_1291 transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3468781..3469665 Rhodopseudomonas palustris DX-1 10065479 YP_004109562.1 CDS Rpdx1_3251 NC_014834.1 3469769 3470965 D KEGG: oan:Oant_4810 sodium/glutamate symporter; TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; sodium/glutamate symporter 3469769..3470965 Rhodopseudomonas palustris DX-1 10065480 YP_004109563.1 CDS Rpdx1_3253 NC_014834.1 3471268 3471879 R PFAM: regulatory protein TetR; KEGG: vap:Vapar_6173 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3471268..3471879) Rhodopseudomonas palustris DX-1 10065482 YP_004109564.1 CDS Rpdx1_3254 NC_014834.1 3472005 3472907 D KEGG: ara:Arad_0941 hypothetical protein; hypothetical protein 3472005..3472907 Rhodopseudomonas palustris DX-1 10065483 YP_004109565.1 CDS Rpdx1_3255 NC_014834.1 3473351 3474400 R KEGG: sto:ST0052 hypothetical protein; hypothetical protein complement(3473351..3474400) Rhodopseudomonas palustris DX-1 10065484 YP_004109566.1 CDS Rpdx1_3256 NC_014834.1 3474397 3475053 R KEGG: xca:xccb100_4359 hypothetical protein; hypothetical protein complement(3474397..3475053) Rhodopseudomonas palustris DX-1 10065485 YP_004109567.1 CDS Rpdx1_3257 NC_014834.1 3475127 3475747 R PFAM: RES domain protein; KEGG: mes:Meso_4398 hypothetical protein; RES domain-containing protein complement(3475127..3475747) Rhodopseudomonas palustris DX-1 10065486 YP_004109568.1 CDS Rpdx1_3258 NC_014834.1 3475748 3476509 R KEGG: mno:Mnod_8614 hypothetical protein; hypothetical protein complement(3475748..3476509) Rhodopseudomonas palustris DX-1 10065487 YP_004109569.1 CDS Rpdx1_3260 NC_014834.1 3478533 3479918 R KEGG: tau:Tola_2435 hypothetical protein; hypothetical protein complement(3478533..3479918) Rhodopseudomonas palustris DX-1 10065489 YP_004109570.1 CDS Rpdx1_3261 NC_014834.1 3480538 3481218 R KEGG: aca:ACP_3268 hypothetical protein; hypothetical protein complement(3480538..3481218) Rhodopseudomonas palustris DX-1 10065490 YP_004109571.1 CDS Rpdx1_3262 NC_014834.1 3482816 3483802 D KEGG: bbt:BBta_2306 AraC/XylS family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3482816..3483802 Rhodopseudomonas palustris DX-1 10065491 YP_004109572.1 CDS Rpdx1_3264 NC_014834.1 3484510 3485844 D PFAM: transposase IS4 family protein; KEGG: nha:Nham_2758 transposase, IS4; transposase IS4 family protein 3484510..3485844 Rhodopseudomonas palustris DX-1 10065493 YP_004109573.1 CDS Rpdx1_3265 NC_014834.1 3486020 3486661 R KEGG: bja:bll7081 two-component response regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; LuxR family two component transcriptional regulator complement(3486020..3486661) Rhodopseudomonas palustris DX-1 10065494 YP_004109574.1 CDS Rpdx1_3266 NC_014834.1 3487584 3487946 R PFAM: protein of unknown function DUF937; KEGG: bra:BRADO4558 hypothetical protein; hypothetical protein complement(3487584..3487946) Rhodopseudomonas palustris DX-1 10065495 YP_004109575.1 CDS Rpdx1_3267 NC_014834.1 3488812 3489222 D KEGG: mrd:Mrad2831_1030 large conductance mechanosensitive channel protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 3488812..3489222 Rhodopseudomonas palustris DX-1 10065496 YP_004109576.1 CDS Rpdx1_3268 NC_014834.1 3489773 3489955 R KEGG: dth:DICTH_1205 DNA repair protein RecO; hypothetical protein complement(3489773..3489955) Rhodopseudomonas palustris DX-1 10065497 YP_004109577.1 CDS Rpdx1_3269 NC_014834.1 3490123 3492108 R KEGG: bja:blr2546 putative chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(3490123..3492108) Rhodopseudomonas palustris DX-1 10065498 YP_004109578.1 CDS Rpdx1_3270 NC_014834.1 3492254 3493567 R KEGG: mag:amb3899 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3492254..3493567) Rhodopseudomonas palustris DX-1 10065499 YP_004109579.1 CDS Rpdx1_3271 NC_014834.1 3494168 3496318 R TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: bbt:BBta_1536 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer complement(3494168..3496318) Rhodopseudomonas palustris DX-1 10065500 YP_004109580.1 CDS Rpdx1_3273 NC_014834.1 3498369 3498608 R PFAM: Protein of unknown function DUF2274; KEGG: xau:Xaut_0739 hypothetical protein; hypothetical protein complement(3498369..3498608) Rhodopseudomonas palustris DX-1 10065502 YP_004109581.1 CDS Rpdx1_3274 NC_014834.1 3498618 3499826 R PFAM: conjugation TrbI family protein; KEGG: bja:blr1620 conjugal transfer protein; conjugation TrbI family protein complement(3498618..3499826) Rhodopseudomonas palustris DX-1 10065503 YP_004109582.1 CDS Rpdx1_3275 NC_014834.1 3499823 3500821 R KEGG: bbt:BBta_7448 putative conjugal transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG complement(3499823..3500821) Rhodopseudomonas palustris DX-1 10065504 YP_004109583.1 CDS Rpdx1_3276 NC_014834.1 3500818 3501501 R KEGG: bja:blr1618 conjugal transfer protein TrbF; conjugal transfer protein TrbF complement(3500818..3501501) Rhodopseudomonas palustris DX-1 10065505 YP_004109584.1 CDS Rpdx1_3277 NC_014834.1 3501501 3502742 R KEGG: bbt:BBta_1505 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL complement(3501501..3502742) Rhodopseudomonas palustris DX-1 10065506 YP_004109585.1 CDS Rpdx1_3278 NC_014834.1 3502742 3503110 R KEGG: bbt:BBta_3369 hypothetical protein; hypothetical protein complement(3502742..3503110) Rhodopseudomonas palustris DX-1 10065507 YP_004109586.1 CDS Rpdx1_3279 NC_014834.1 3503107 3503844 R TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: bbt:BBta_3368 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ complement(3503107..3503844) Rhodopseudomonas palustris DX-1 10065508 YP_004109587.1 CDS Rpdx1_3280 NC_014834.1 3503841 3506282 R KEGG: bbt:BBta_3367 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase; type IV transporter subunit CagE/TrbE/VirB complement(3503841..3506282) Rhodopseudomonas palustris DX-1 10065509 YP_004109588.1 CDS Rpdx1_3281 NC_014834.1 3506292 3506573 R KEGG: oan:Oant_3214 conjugal transfer protein TrbB; conjugal transfer protein TrbB complement(3506292..3506573) Rhodopseudomonas palustris DX-1 10065510 YP_004109589.1 CDS Rpdx1_3282 NC_014834.1 3506573 3506902 R PFAM: Conjugal transfer protein TrbC; KEGG: bbt:BBta_7742 conjugal transfer protein TrbC precursor; conjugal transfer protein TrbC complement(3506573..3506902) Rhodopseudomonas palustris DX-1 10065511 YP_004109590.1 CDS Rpdx1_3283 NC_014834.1 3506899 3507897 R KEGG: bbt:BBta_7741 conjugal transfer protein TrbB; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; P-type conjugative transfer ATPase TrbB complement(3506899..3507897) Rhodopseudomonas palustris DX-1 10065512 YP_004109591.1 CDS Rpdx1_3285 NC_014834.1 3508786 3510006 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pst:PSPTO_1004 GGDEF domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3508786..3510006) Rhodopseudomonas palustris DX-1 10065514 YP_004109592.1 CDS Rpdx1_3286 NC_014834.1 3510362 3512035 R TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: bbt:BBta_2308 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer complement(3510362..3512035) Rhodopseudomonas palustris DX-1 10065515 YP_004109593.1 CDS Rpdx1_3287 NC_014834.1 3512495 3513199 R KEGG: xal:XALc_0354 probable biotin synthase protein; hypothetical protein complement(3512495..3513199) Rhodopseudomonas palustris DX-1 10065516 YP_004109594.1 CDS Rpdx1_3288 NC_014834.1 3513709 3514917 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll3855 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(3513709..3514917) Rhodopseudomonas palustris DX-1 10065517 YP_004109595.1 CDS Rpdx1_3289 NC_014834.1 3515067 3516602 R KEGG: mlo:mll1722 ATP-binding protein of sugar ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3515067..3516602) Rhodopseudomonas palustris DX-1 10065518 YP_004109596.1 CDS Rpdx1_3291 NC_014834.1 3517708 3519876 R PFAM: inner-membrane translocator; Strictosidine synthase, conserved region; KEGG: bja:blr7869 ABC transporter permease protein; inner-membrane translocator complement(3517708..3519876) Rhodopseudomonas palustris DX-1 10065520 YP_004109597.1 CDS Rpdx1_3292 NC_014834.1 3519951 3520973 R KEGG: vei:Veis_3291 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein complement(3519951..3520973) Rhodopseudomonas palustris DX-1 10065521 YP_004109598.1 CDS Rpdx1_3293 NC_014834.1 3521034 3521972 R PFAM: inner-membrane translocator; KEGG: vei:Veis_3290 inner-membrane translocator; inner-membrane translocator complement(3521034..3521972) Rhodopseudomonas palustris DX-1 10065522 YP_004109599.1 CDS Rpdx1_3294 NC_014834.1 3522199 3522915 D KEGG: mno:Mnod_3745 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3522199..3522915 Rhodopseudomonas palustris DX-1 10065523 YP_004109600.1 CDS Rpdx1_3295 NC_014834.1 3523176 3523589 R manually curated; KEGG: bbt:BBta_3357 hypothetical protein; hypothetical protein complement(3523176..3523589) Rhodopseudomonas palustris DX-1 10065524 YP_004109601.1 CDS Rpdx1_3296 NC_014834.1 3523600 3525603 R PFAM: TRAG family protein; KEGG: bbt:BBta_3356 conjugal transfer coupling protein TraG; TRAG family protein complement(3523600..3525603) Rhodopseudomonas palustris DX-1 10065525 YP_004109602.1 CDS Rpdx1_3297 NC_014834.1 3525729 3527480 R KEGG: bbt:BBta_3351 hypothetical protein; hypothetical protein complement(3525729..3527480) Rhodopseudomonas palustris DX-1 10065526 YP_004109603.1 CDS Rpdx1_3298 NC_014834.1 3528016 3529104 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: xau:Xaut_4009 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein complement(3528016..3529104) Rhodopseudomonas palustris DX-1 10065527 YP_004109604.1 CDS Rpdx1_3299 NC_014834.1 3529310 3530209 R PFAM: Lytic transglycosylase catalytic; KEGG: bbt:BBta_3350 putative lytic transglycosylase; lytic transglycosylase complement(3529310..3530209) Rhodopseudomonas palustris DX-1 10065528 YP_004109605.1 CDS Rpdx1_3300 NC_014834.1 3530218 3530733 R PFAM: Peptidase S26, conserved region; KEGG: bbt:BBta_7435 putative conjugal transfer protein precursor; peptidase S26 complement(3530218..3530733) Rhodopseudomonas palustris DX-1 10065529 YP_004109606.1 CDS Rpdx1_3301 NC_014834.1 3530730 3531194 R KEGG: xau:Xaut_4012 hypothetical protein; hypothetical protein complement(3530730..3531194) Rhodopseudomonas palustris DX-1 10065530 YP_004109607.1 CDS Rpdx1_3302 NC_014834.1 3531507 3532388 R PFAM: Replication initiator protein A; KEGG: bbt:BBta_3347 putative replication protein A; replication initiator protein A complement(3531507..3532388) Rhodopseudomonas palustris DX-1 10065531 YP_004109608.1 CDS Rpdx1_3303 NC_014834.1 3532412 3532696 R KEGG: bbt:BBta_3346 hypothetical protein; hypothetical protein complement(3532412..3532696) Rhodopseudomonas palustris DX-1 10065532 YP_004109609.1 CDS Rpdx1_3304 NC_014834.1 3532823 3533458 R manually curated; KEGG: bbt:BBta_1487 hypothetical protein; hypothetical protein complement(3532823..3533458) Rhodopseudomonas palustris DX-1 10065533 YP_004109610.1 CDS Rpdx1_3305 NC_014834.1 3533760 3534038 R KEGG: bbt:BBta_3343 hypothetical protein; hypothetical protein complement(3533760..3534038) Rhodopseudomonas palustris DX-1 10065534 YP_004109611.1 CDS Rpdx1_3306 NC_014834.1 3534181 3534441 D manually curated; PFAM: helix-turn-helix domain protein; KEGG: oan:Oant_1848 XRE family transcriptional regulator; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3534181..3534441 Rhodopseudomonas palustris DX-1 10065535 YP_004109612.1 CDS Rpdx1_3307 NC_014834.1 3534573 3534896 R PFAM: protein of unknown function DUF736; KEGG: bbt:BBta_7420 hypothetical protein; hypothetical protein complement(3534573..3534896) Rhodopseudomonas palustris DX-1 10065536 YP_004109613.1 CDS Rpdx1_3308 NC_014834.1 3535006 3535650 D KEGG: mgr:MGG_04575 hypothetical protein; hypothetical protein 3535006..3535650 Rhodopseudomonas palustris DX-1 10065537 YP_004109614.1 CDS Rpdx1_3310 NC_014834.1 3536124 3537278 R PFAM: Protein of unknown function DUF2493; KEGG: bbt:BBta_7415 hypothetical protein; hypothetical protein complement(3536124..3537278) Rhodopseudomonas palustris DX-1 10065539 YP_004109615.1 CDS Rpdx1_3311 NC_014834.1 3537392 3538393 R manually curated; KEGG: bbt:BBta_7414 hypothetical protein; hypothetical protein complement(3537392..3538393) Rhodopseudomonas palustris DX-1 10065540 YP_004109616.1 CDS Rpdx1_3312 NC_014834.1 3538424 3542779 R KEGG: gdj:Gdia_2784 putative methylase/helicase; putative methylase/helicase complement(3538424..3542779) Rhodopseudomonas palustris DX-1 10065541 YP_004109617.1 CDS Rpdx1_3313 NC_014834.1 3542927 3545035 R KEGG: gdj:Gdia_2781 ParB domain protein nuclease; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; ParB domain-containing protein nuclease complement(3542927..3545035) Rhodopseudomonas palustris DX-1 10065542 YP_004109618.1 CDS Rpdx1_3314 NC_014834.1 3545118 3546107 R PFAM: domain of unknown function DUF1738; KEGG: bbt:BBta_7394 putative ArdC antirestriction protein; hypothetical protein complement(3545118..3546107) Rhodopseudomonas palustris DX-1 10065543 YP_004109619.1 CDS Rpdx1_3315 NC_014834.1 3546367 3546663 D PFAM: Prophage CP4-57 regulatory; KEGG: nwi:Nwi_2141 prophage CP4-57 regulatory; prophage CP4-57 regulatory 3546367..3546663 Rhodopseudomonas palustris DX-1 10065544 YP_004109620.1 CDS Rpdx1_3316 NC_014834.1 3546617 3547873 R PFAM: integrase family protein; KEGG: azl:AZL_011700 phage integrase; integrase family protein complement(3546617..3547873) Rhodopseudomonas palustris DX-1 10065545 YP_004109621.1 CDS Rpdx1_3317 NC_014834.1 3548164 3549786 R KEGG: nwi:Nwi_2143 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; GMP synthase large subunit complement(3548164..3549786) Rhodopseudomonas palustris DX-1 10065546 YP_004109622.1 CDS Rpdx1_3318 NC_014834.1 3550033 3551331 R PFAM: Fmu (Sun) domain protein; KEGG: bja:blr3985 Sun protein; Fmu (Sun) domain-containing protein complement(3550033..3551331) Rhodopseudomonas palustris DX-1 10065547 YP_004109623.1 CDS Rpdx1_3319 NC_014834.1 3551521 3552546 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bbt:BBta_3611 putative NADP-dependent oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein complement(3551521..3552546) Rhodopseudomonas palustris DX-1 10065548 YP_004109624.1 CDS Rpdx1_3320 NC_014834.1 3552795 3554291 R SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: bbt:BBta_3610 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; inosine-5'-monophosphate dehydrogenase complement(3552795..3554291) Rhodopseudomonas palustris DX-1 10065549 YP_004109625.1 CDS Rpdx1_3321 NC_014834.1 3554655 3554903 R KEGG: nwi:Nwi_2147 hypothetical protein; hypothetical protein complement(3554655..3554903) Rhodopseudomonas palustris DX-1 10065550 YP_004109626.1 CDS Rpdx1_3322 NC_014834.1 3555097 3556569 D PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3608 putative multidrug efflux protein; major facilitator superfamily protein 3555097..3556569 Rhodopseudomonas palustris DX-1 10065551 YP_004109627.1 CDS Rpdx1_3323 NC_014834.1 3556600 3556776 R hypothetical protein complement(3556600..3556776) Rhodopseudomonas palustris DX-1 10065552 YP_004109628.1 CDS Rpdx1_3324 NC_014834.1 3556936 3557649 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: oca:OCAR_6472 ribosomal RNA large subunit methyltransferase J; ribosomal RNA methyltransferase RrmJ/FtsJ complement(3556936..3557649) Rhodopseudomonas palustris DX-1 10065553 YP_004109629.1 CDS Rpdx1_3325 NC_014834.1 3557846 3558421 D KEGG: avi:Avi_2601 hypothetical protein; hypothetical protein 3557846..3558421 Rhodopseudomonas palustris DX-1 10065554 YP_004109630.1 CDS Rpdx1_3326 NC_014834.1 3558451 3559518 R PFAM: Ppx/GppA phosphatase; KEGG: bja:blr3969 exopolyphosphatase; Ppx/GppA phosphatase complement(3558451..3559518) Rhodopseudomonas palustris DX-1 10065555 YP_004109631.1 CDS Rpdx1_3327 NC_014834.1 3559758 3562133 D KEGG: bja:bll3968 carbon monoxide dehydrogenase large chain; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; carbon-monoxide dehydrogenase 3559758..3562133 Rhodopseudomonas palustris DX-1 10065556 YP_004109632.1 CDS Rpdx1_3328 NC_014834.1 3562306 3563520 R PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_5091 putative branched-chain amino acid ABC transporter, substrate-binding protein; extracellular ligand-binding receptor complement(3562306..3563520) Rhodopseudomonas palustris DX-1 10065557 YP_004109633.1 CDS Rpdx1_3329 NC_014834.1 3563712 3564512 R KEGG: bbt:BBta_3593 hypothetical protein; hypothetical protein complement(3563712..3564512) Rhodopseudomonas palustris DX-1 10065558 YP_004109634.1 CDS Rpdx1_3330 NC_014834.1 3564615 3565091 D PFAM: protein of unknown function DUF188; KEGG: bja:bll3966 hypothetical protein; hypothetical protein 3564615..3565091 Rhodopseudomonas palustris DX-1 10065559 YP_004109635.1 CDS Rpdx1_3331 NC_014834.1 3565102 3566919 D KEGG: nha:Nham_2552 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3565102..3566919 Rhodopseudomonas palustris DX-1 10065560 YP_004109636.1 CDS Rpdx1_3332 NC_014834.1 3567099 3568181 D PFAM: alanine racemase domain protein; KEGG: bra:BRADO3145 putative amino acid processing enzyme-related protein (aldolase or racemase); alanine racemase domain-containing protein 3567099..3568181 Rhodopseudomonas palustris DX-1 10065561 YP_004109637.1 CDS Rpdx1_3333 NC_014834.1 3568294 3569526 R PFAM: HI0933 family protein; KEGG: bra:BRADO3144 putative signal peptide; hypothetical protein complement(3568294..3569526) Rhodopseudomonas palustris DX-1 10065562 YP_004109638.1 CDS Rpdx1_3334 NC_014834.1 3569878 3570795 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_3584 putative 3-oxo-(acyl) acyl carrier protein reductase; short-chain dehydrogenase/reductase SDR complement(3569878..3570795) Rhodopseudomonas palustris DX-1 10065563 YP_004109639.1 CDS Rpdx1_3335 NC_014834.1 3570814 3571281 R PFAM: MaoC domain protein dehydratase; KEGG: nha:Nham_2554 MaoC-like dehydratase; MaoC domain-containing protein dehydratase complement(3570814..3571281) Rhodopseudomonas palustris DX-1 10065564 YP_004109640.1 CDS Rpdx1_3336 NC_014834.1 3571373 3572347 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_5263 putative oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein complement(3571373..3572347) Rhodopseudomonas palustris DX-1 10065565 YP_004109641.1 CDS Rpdx1_3337 NC_014834.1 3572347 3572967 R PFAM: DSBA oxidoreductase; KEGG: bja:bll5606 putative 2-hydroxychromene-2-carboxylate isomerase; DSBA oxidoreductase complement(3572347..3572967) Rhodopseudomonas palustris DX-1 10065566 YP_004109642.1 CDS Rpdx1_3338 NC_014834.1 3573086 3573805 R PFAM: Glutathione S-transferase domain; KEGG: bja:bll5607 glutathione S-transferase; glutathione S-transferase domain-containing protein complement(3573086..3573805) Rhodopseudomonas palustris DX-1 10065567 YP_004109643.1 CDS Rpdx1_3339 NC_014834.1 3573938 3574960 D PFAM: Methionine synthase vitamin-B12 independent; KEGG: bra:BRADO2911 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; vitamin-B12 independent methionine synthase 3573938..3574960 Rhodopseudomonas palustris DX-1 10065568 YP_004109644.1 CDS Rpdx1_3340 NC_014834.1 3575168 3575842 R KEGG: nha:Nham_2589 hypothetical protein; hypothetical protein complement(3575168..3575842) Rhodopseudomonas palustris DX-1 10065569 YP_004109645.1 CDS Rpdx1_3341 NC_014834.1 3576125 3576646 R KEGG: bja:bll5610 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; Xanthine phosphoribosyltransferase complement(3576125..3576646) Rhodopseudomonas palustris DX-1 10065570 YP_004109646.1 CDS Rpdx1_3342 NC_014834.1 3576805 3577542 R PFAM: molybdopterin binding domain; KEGG: bbt:BBta_5271 hypothetical protein; molybdopterin-binding domain complement(3576805..3577542) Rhodopseudomonas palustris DX-1 10065571 YP_004109647.1 CDS Rpdx1_3343 NC_014834.1 3577760 3579178 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bbt:BBta_5273 hypothetical protein; hypothetical protein 3577760..3579178 Rhodopseudomonas palustris DX-1 10065572 YP_004109648.1 CDS Rpdx1_3344 NC_014834.1 3579418 3580362 D PFAM: protein of unknown function DUF403; KEGG: bra:BRADO2904 hypothetical protein; hypothetical protein 3579418..3580362 Rhodopseudomonas palustris DX-1 10065573 YP_004109649.1 CDS Rpdx1_3345 NC_014834.1 3580414 3581241 D KEGG: bja:blr5614 hypothetical protein; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; transglutaminase domain-containing protein 3580414..3581241 Rhodopseudomonas palustris DX-1 10065574 YP_004109650.1 CDS Rpdx1_3346 NC_014834.1 3581353 3582099 D PFAM: 20S proteasome A and B subunits; KEGG: bja:blr5617 hypothetical protein; 20S proteasome subunits A/B 3581353..3582099 Rhodopseudomonas palustris DX-1 10065575 YP_004109651.1 CDS Rpdx1_3347 NC_014834.1 3582311 3582880 D PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_2393 hypothetical protein; N-acetyltransferase GCN5 3582311..3582880 Rhodopseudomonas palustris DX-1 10065576 YP_004109652.1 CDS Rpdx1_3348 NC_014834.1 3583003 3584190 D KEGG: mlo:mlr0003 hypothetical protein; hypothetical protein 3583003..3584190 Rhodopseudomonas palustris DX-1 10065577 YP_004109653.1 CDS Rpdx1_3349 NC_014834.1 3584271 3585029 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr5618 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 3584271..3585029 Rhodopseudomonas palustris DX-1 10065578 YP_004109654.1 CDS Rpdx1_3350 NC_014834.1 3585201 3585620 D PFAM: Proteinase inhibitor I42, chagasin; KEGG: mma:MM_0269 hypothetical protein; proteinase inhibitor I42, chagasin 3585201..3585620 Rhodopseudomonas palustris DX-1 10065579 YP_004109655.1 CDS Rpdx1_3351 NC_014834.1 3585628 3586125 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: mrb:Mrub_0901 cupin 2 conserved barrel domain-containing protein; cupin complement(3585628..3586125) Rhodopseudomonas palustris DX-1 10065580 YP_004109656.1 CDS Rpdx1_3352 NC_014834.1 3586115 3587215 R PFAM: ribulose bisphosphate carboxylase large chain; KEGG: rru:Rru_A1998 ribulose 1,5-bisphosphate carboxylase large subunit; RuBisCO-like protein complement(3586115..3587215) Rhodopseudomonas palustris DX-1 10065581 YP_004109657.1 CDS Rpdx1_3353 NC_014834.1 3587395 3588645 D PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; KEGG: bja:blr5621 hypothetical protein; Na+ dependent nucleoside transporter domain-containing protein 3587395..3588645 Rhodopseudomonas palustris DX-1 10065582 YP_004109658.1 CDS Rpdx1_3354 NC_014834.1 3588892 3590583 D KEGG: rcu:RCOM_1844190 hypothetical protein; hypothetical protein 3588892..3590583 Rhodopseudomonas palustris DX-1 10065583 YP_004109659.1 CDS Rpdx1_3355 NC_014834.1 3590704 3591405 R KEGG: vei:Veis_2854 hypothetical protein; hypothetical protein complement(3590704..3591405) Rhodopseudomonas palustris DX-1 10065584 YP_004109660.1 CDS Rpdx1_3356 NC_014834.1 3591406 3591669 R KEGG: ach:Achl_4618 6-phosphofructokinase; hypothetical protein complement(3591406..3591669) Rhodopseudomonas palustris DX-1 10065585 YP_004109661.1 CDS Rpdx1_3357 NC_014834.1 3591746 3592030 R PFAM: Usg family protein; KEGG: nha:Nham_2592 hypothetical protein; Usg family protein complement(3591746..3592030) Rhodopseudomonas palustris DX-1 10065586 YP_004109662.1 CDS Rpdx1_3358 NC_014834.1 3592474 3592788 D PFAM: Chaperonin Cpn10; KEGG: bra:BRADO2893 co-chaperonin GroES; chaperonin Cpn10 3592474..3592788 Rhodopseudomonas palustris DX-1 10065587 YP_004109663.1 CDS Rpdx1_3359 NC_014834.1 3592941 3594581 D KEGG: bbt:BBta_5285 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; chaperonin GroEL 3592941..3594581 Rhodopseudomonas palustris DX-1 10065588 YP_004109664.1 CDS Rpdx1_3360 NC_014834.1 3594729 3595010 D PFAM: plasmid maintenance system killer; KEGG: msl:Msil_2105 plasmid maintenance system killer; plasmid maintenance system killer protein 3594729..3595010 Rhodopseudomonas palustris DX-1 10065589 YP_004109665.1 CDS Rpdx1_3361 NC_014834.1 3595023 3595307 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: mpo:Mpop_2927 plasmid maintenance system antidote protein, XRE family; SMART: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 3595023..3595307 Rhodopseudomonas palustris DX-1 10065590 YP_004109666.1 CDS Rpdx1_3362 NC_014834.1 3595474 3595764 R KEGG: rru:Rru_A3411 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(3595474..3595764) Rhodopseudomonas palustris DX-1 10065591 YP_004109667.1 CDS Rpdx1_3363 NC_014834.1 3595788 3596081 R PFAM: protein of unknown function DUF891; KEGG: cak:Caul_5448 hypothetical protein; hypothetical protein complement(3595788..3596081) Rhodopseudomonas palustris DX-1 10065592 YP_004109668.1 CDS Rpdx1_3364 NC_014834.1 3596222 3596917 D KEGG: bbt:BBta_4386 transporter; TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; yecA family protein 3596222..3596917 Rhodopseudomonas palustris DX-1 10065593 YP_004109669.1 CDS Rpdx1_3365 NC_014834.1 3597000 3597314 R KEGG: bbt:BBta_4243 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR complement(3597000..3597314) Rhodopseudomonas palustris DX-1 10065594 YP_004109670.1 CDS Rpdx1_3366 NC_014834.1 3597404 3598153 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_4242 putative short-chain dehydrogenases/reductases (SDR) family protein; short-chain dehydrogenase/reductase SDR 3597404..3598153 Rhodopseudomonas palustris DX-1 10065595 YP_004109671.1 CDS Rpdx1_3367 NC_014834.1 3598790 3599122 R KEGG: oca:OCAR_5493 hypothetical protein; hypothetical protein complement(3598790..3599122) Rhodopseudomonas palustris DX-1 10065596 YP_004109672.1 CDS Rpdx1_3368 NC_014834.1 3599256 3600452 R KEGG: bra:BRADO2881 hypothetical protein; hypothetical protein complement(3599256..3600452) Rhodopseudomonas palustris DX-1 10065597 YP_004109673.1 CDS Rpdx1_3369 NC_014834.1 3600849 3601127 D KEGG: bid:Bind_2047 hypothetical protein; hypothetical protein 3600849..3601127 Rhodopseudomonas palustris DX-1 10065598 YP_004109674.1 CDS Rpdx1_3370 NC_014834.1 3601147 3601842 R PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rlt:Rleg2_5933 protein of unknown function DUF899 thioredoxin family protein; hypothetical protein complement(3601147..3601842) Rhodopseudomonas palustris DX-1 10065599 YP_004109675.1 CDS Rpdx1_3371 NC_014834.1 3601931 3603637 R KEGG: bbt:BBta_2834 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(3601931..3603637) Rhodopseudomonas palustris DX-1 10065600 YP_004109676.1 CDS Rpdx1_3372 NC_014834.1 3603702 3603806 R hypothetical protein complement(3603702..3603806) Rhodopseudomonas palustris DX-1 10065601 YP_004109677.1 CDS Rpdx1_3373 NC_014834.1 3603989 3605419 R PFAM: Aldehyde Dehydrogenase; KEGG: bbt:BBta_2831 aldehyde dehydrogenase; aldehyde dehydrogenase complement(3603989..3605419) Rhodopseudomonas palustris DX-1 10065602 YP_004109678.1 CDS Rpdx1_3374 NC_014834.1 3605664 3607685 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: oca:OCAR_6732 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase complement(3605664..3607685) Rhodopseudomonas palustris DX-1 10065603 YP_004109679.1 CDS Rpdx1_3375 NC_014834.1 3607883 3608953 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bra:BRADO2478 putative transmembrane protein; hypothetical protein complement(3607883..3608953) Rhodopseudomonas palustris DX-1 10065604 YP_004109680.1 CDS Rpdx1_3376 NC_014834.1 3609012 3609857 R PFAM: aldo/keto reductase; KEGG: bja:blr2810 aldo/keto reductase; aldo/keto reductase complement(3609012..3609857) Rhodopseudomonas palustris DX-1 10065605 YP_004109681.1 CDS Rpdx1_3377 NC_014834.1 3609870 3610781 R KEGG: bbt:BBta_2816 putative catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; hydroxyquinol 1,2-dioxygenase complement(3609870..3610781) Rhodopseudomonas palustris DX-1 10065606 YP_004109682.1 CDS Rpdx1_3378 NC_014834.1 3611014 3612282 D PFAM: beta-lactamase; KEGG: nha:Nham_2704 beta-lactamase; beta-lactamase 3611014..3612282 Rhodopseudomonas palustris DX-1 10065607 YP_004109683.1 CDS Rpdx1_3379 NC_014834.1 3612438 3613916 R PFAM: AMP-dependent synthetase and ligase; KEGG: rer:RER_46870 fatty-acid--CoA ligase; AMP-dependent synthetase and ligase complement(3612438..3613916) Rhodopseudomonas palustris DX-1 10065608 YP_004109684.1 CDS Rpdx1_3380 NC_014834.1 3614133 3614912 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO5287 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(3614133..3614912) Rhodopseudomonas palustris DX-1 10065609 YP_004109685.1 CDS Rpdx1_3381 NC_014834.1 3614922 3616892 R PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: bja:blr0987 3-methylcrotonyl-CoA carboxylase alpha subunit; carbamoyl-phosphate synthase L chain ATP-binding protein complement(3614922..3616892) Rhodopseudomonas palustris DX-1 10065610 YP_004109686.1 CDS Rpdx1_3382 NC_014834.1 3616904 3618526 R KEGG: bbt:BBta_0675 putative carboxylase; PFAM: carboxyl transferase; methylcrotonoyl-CoA carboxylase complement(3616904..3618526) Rhodopseudomonas palustris DX-1 10065611 YP_004109687.1 CDS Rpdx1_3383 NC_014834.1 3618707 3620311 R PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0674 putative fatty-acid--CoA ligase; AMP-dependent synthetase and ligase complement(3618707..3620311) Rhodopseudomonas palustris DX-1 10065612 YP_004109688.1 CDS Rpdx1_3384 NC_014834.1 3620477 3621343 R PFAM: protein of unknown function DUF849; KEGG: bbt:BBta_0673 hypothetical protein; hypothetical protein complement(3620477..3621343) Rhodopseudomonas palustris DX-1 10065613 YP_004109689.1 CDS Rpdx1_3385 NC_014834.1 3621464 3622288 R SMART: Helix-turn-helix, AraC domain; KEGG: bbt:BBta_0671 AraC family transcriptional regulator; helix-turn-helix domain-containing protein complement(3621464..3622288) Rhodopseudomonas palustris DX-1 10065614 YP_004109690.1 CDS Rpdx1_3386 NC_014834.1 3622455 3623105 R PFAM: Glutathione S-transferase domain; KEGG: bja:blr0983 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein complement(3622455..3623105) Rhodopseudomonas palustris DX-1 10065615 YP_004109691.1 CDS Rpdx1_3387 NC_014834.1 3623266 3624420 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO6880 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(3623266..3624420) Rhodopseudomonas palustris DX-1 10065616 YP_004109692.1 CDS Rpdx1_3388 NC_014834.1 3624556 3625695 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr0981 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(3624556..3625695) Rhodopseudomonas palustris DX-1 10065617 YP_004109693.1 CDS Rpdx1_3389 NC_014834.1 3625801 3626112 R KEGG: bja:blr6128 cytochrome c552; cytochrome c552 complement(3625801..3626112) Rhodopseudomonas palustris DX-1 10065618 YP_004109694.1 CDS Rpdx1_3390 NC_014834.1 3626328 3628451 D KEGG: bja:blr0516 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator receiver; integral membrane sensor hybrid histidine kinase 3626328..3628451 Rhodopseudomonas palustris DX-1 10065619 YP_004109695.1 CDS Rpdx1_3391 NC_014834.1 3628500 3628952 R KEGG: nha:Nham_2144 hypothetical protein; hypothetical protein complement(3628500..3628952) Rhodopseudomonas palustris DX-1 10065620 YP_004109696.1 CDS Rpdx1_3392 NC_014834.1 3629120 3629908 R KEGG: bbt:BBta_1104 hypothetical protein; hypothetical protein complement(3629120..3629908) Rhodopseudomonas palustris DX-1 10065621 YP_004109697.1 CDS Rpdx1_3393 NC_014834.1 3629913 3631220 R KEGG: bra:BRADO6538 hypothetical protein; hypothetical protein complement(3629913..3631220) Rhodopseudomonas palustris DX-1 10065622 YP_004109698.1 CDS Rpdx1_3395 NC_014834.1 3632288 3633094 D PFAM: protein of unknown function DUF81; KEGG: bvi:Bcep1808_3205 hypothetical protein; hypothetical protein 3632288..3633094 Rhodopseudomonas palustris DX-1 10065624 YP_004109699.1 CDS Rpdx1_3396 NC_014834.1 3633256 3633477 D KEGG: bbt:BBta_2219 hypothetical protein; hypothetical protein 3633256..3633477 Rhodopseudomonas palustris DX-1 10065625 YP_004109700.1 CDS Rpdx1_3397 NC_014834.1 3633612 3633788 R hypothetical protein complement(3633612..3633788) Rhodopseudomonas palustris DX-1 10065626 YP_004109701.1 CDS Rpdx1_3398 NC_014834.1 3634036 3634887 R KEGG: bja:bll7071 TonB protein; TIGRFAM: TonB family protein; PFAM: TonB domain; TonB family protein complement(3634036..3634887) Rhodopseudomonas palustris DX-1 10065627 YP_004109702.1 CDS Rpdx1_3399 NC_014834.1 3634884 3635321 R KEGG: bja:bll7072 biopolymer transport protein; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TonB system transport protein ExbD complement(3634884..3635321) Rhodopseudomonas palustris DX-1 10065628 YP_004109703.1 CDS Rpdx1_3400 NC_014834.1 3635326 3636126 R KEGG: bja:bll7073 biopolymer transport protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB complement(3635326..3636126) Rhodopseudomonas palustris DX-1 10065629 YP_004109704.1 CDS Rpdx1_3401 NC_014834.1 3636119 3636655 R PFAM: protein of unknown function DUF1008; KEGG: bja:bll7074 hypothetical protein; hypothetical protein complement(3636119..3636655) Rhodopseudomonas palustris DX-1 10065630 YP_004109705.1 CDS Rpdx1_3402 NC_014834.1 3636675 3637007 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bja:bll7075 hypothetical protein; antibiotic biosynthesis monooxygenase complement(3636675..3637007) Rhodopseudomonas palustris DX-1 10065631 YP_004109706.1 CDS Rpdx1_3403 NC_014834.1 3637085 3639421 R KEGG: bja:bll7076 hemin receptor precursor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent heme/hemoglobin receptor family protein complement(3637085..3639421) Rhodopseudomonas palustris DX-1 10065632 YP_004109707.1 CDS Rpdx1_3404 NC_014834.1 3639737 3640408 R PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: hha:Hhal_0382 NAD-dependent epimerase/dehydratase family protein; dTDP-4-dehydrorhamnose reductase complement(3639737..3640408) Rhodopseudomonas palustris DX-1 10065633 YP_004109708.1 CDS Rpdx1_3405 NC_014834.1 3640396 3641751 R KEGG: hemN1; oxygen-independent coproporphyrinogen-III oxidase-1; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(3640396..3641751) Rhodopseudomonas palustris DX-1 10065634 YP_004109709.1 CDS Rpdx1_3406 NC_014834.1 3642194 3642436 D PFAM: Hemin uptake protein hemP; KEGG: oca:OCAR_4889 hypothetical protein; hemin uptake protein HemP 3642194..3642436 Rhodopseudomonas palustris DX-1 10065635 YP_004109710.1 CDS Rpdx1_3407 NC_014834.1 3642433 3643410 D PFAM: periplasmic binding protein; KEGG: bja:blr7077 hemin ABC transporter hemin-binding protein; periplasmic-binding protein 3642433..3643410 Rhodopseudomonas palustris DX-1 10065636 YP_004109711.1 CDS Rpdx1_3408 NC_014834.1 3643407 3644489 D PFAM: transport system permease protein; KEGG: nwi:Nwi_2323 ABC-type Fe3+-siderophore transport system permease component; transporter permease 3643407..3644489 Rhodopseudomonas palustris DX-1 10065637 YP_004109712.1 CDS Rpdx1_3409 NC_014834.1 3644486 3645298 D KEGG: bja:blr7079 hemin importer ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3644486..3645298 Rhodopseudomonas palustris DX-1 10065638 YP_004109713.1 CDS Rpdx1_3410 NC_014834.1 3645500 3645982 D KEGG: azc:AZC_2373 flavodoxin FldA; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin 3645500..3645982 Rhodopseudomonas palustris DX-1 10065639 YP_004109714.1 CDS Rpdx1_3411 NC_014834.1 3645961 3646377 D PFAM: Domain of unknown function DUF2023; KEGG: xau:Xaut_0833 hypothetical protein; hypothetical protein 3645961..3646377 Rhodopseudomonas palustris DX-1 10065640 YP_004109715.1 CDS Rpdx1_3412 NC_014834.1 3646622 3647110 R TIGRFAM: cyanate lyase; KEGG: bbt:BBta_5412 cyanate hydratase; PFAM: Cyanate lyase domain protein; cyanate lyase complement(3646622..3647110) Rhodopseudomonas palustris DX-1 10065641 YP_004109716.1 CDS Rpdx1_3413 NC_014834.1 3647155 3648045 R KEGG: bja:bll5732 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3647155..3648045) Rhodopseudomonas palustris DX-1 10065642 YP_004109717.1 CDS Rpdx1_3414 NC_014834.1 3648051 3648890 R KEGG: bbt:BBta_5414 putative nitrate ABC transporter (permease protein) (NtrB-like protein); TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; nitrate ABC transporter inner membrane subunit complement(3648051..3648890) Rhodopseudomonas palustris DX-1 10065643 YP_004109718.1 CDS Rpdx1_3415 NC_014834.1 3649053 3650438 R KEGG: bja:bll5734 ABC transporter nitrate-binding protein; ABC transporter nitrate-binding protein complement(3649053..3650438) Rhodopseudomonas palustris DX-1 10065644 YP_004109719.1 CDS Rpdx1_3416 NC_014834.1 3650600 3652525 D TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: bja:blr5735 transcriptional regulatory protein; SMART: AAA ATPase; PAC repeat-containing protein; PAS domain containing protein; Fis family sigma-54 specific transcriptional regulator with PAS/PAC sensor 3650600..3652525 Rhodopseudomonas palustris DX-1 10065645 YP_004109720.1 CDS Rpdx1_3417 NC_014834.1 3652565 3653332 R TIGRFAM: precorrin-6A synthase (deacetylating); KEGG: rhi:NGR_c29820 deacetylating precorrin-6A synthase CobF; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6A synthase complement(3652565..3653332) Rhodopseudomonas palustris DX-1 10065646 YP_004109721.1 CDS Rpdx1_3418 NC_014834.1 3653362 3654936 R KEGG: rce:RC1_0321 cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyric acid synthase CobQ complement(3653362..3654936) Rhodopseudomonas palustris DX-1 10065647 YP_004109722.1 CDS Rpdx1_3419 NC_014834.1 3655023 3655793 R PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cobalamin 5'-phosphate synthase; cobalamin-5-phosphate synthase CobS complement(3655023..3655793) Rhodopseudomonas palustris DX-1 10065648 YP_004109723.1 CDS Rpdx1_3420 NC_014834.1 3655790 3656854 R TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(3655790..3656854) Rhodopseudomonas palustris DX-1 10065649 YP_004109724.1 CDS Rpdx1_3421 NC_014834.1 3657414 3658718 D manually curated; TIGRFAM: precorrin 3B synthase CobZ; KEGG: alv:Alvin_1082 precorrin 3B synthase CobZ; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; precorrin 3B synthase CobZ 3657414..3658718 Rhodopseudomonas palustris DX-1 10065650 YP_004109725.1 CDS Rpdx1_3422 NC_014834.1 3658705 3659841 D TIGRFAM: CitB domain protein; KEGG: azl:AZL_b02760 citrate utilization protein B; CitB domain-containing protein 3658705..3659841 Rhodopseudomonas palustris DX-1 10065651 YP_004109726.1 CDS Rpdx1_3423 NC_014834.1 3660242 3660805 D KEGG: bja:blr3263 cobaltochelatase subunit CobN; hypothetical protein 3660242..3660805 Rhodopseudomonas palustris DX-1 10065652 YP_004109727.1 CDS Rpdx1_3424 NC_014834.1 3660802 3661431 D KEGG: rde:RD1_3825 precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH; precorrin-8X methylmutase 3660802..3661431 Rhodopseudomonas palustris DX-1 10065653 YP_004109728.1 CDS Rpdx1_3425 NC_014834.1 3661428 3662156 D KEGG: sil:SPO2866 precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-2 C(20)-methyltransferase 3661428..3662156 Rhodopseudomonas palustris DX-1 10065654 YP_004109729.1 CDS Rpdx1_3426 NC_014834.1 3662153 3662914 D TIGRFAM: precorrin-3B C17-methyltransferase; KEGG: sjp:SJA_C2-03130 precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-3B C(17)-methyltransferase 3662153..3662914 Rhodopseudomonas palustris DX-1 10065655 YP_004109730.1 CDS Rpdx1_3427 NC_014834.1 3662881 3663630 R TIGRFAM: precorrin-6x reductase; KEGG: rde:RD1_3822 precorrin-6A reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase complement(3662881..3663630) Rhodopseudomonas palustris DX-1 10065656 YP_004109731.1 CDS Rpdx1_3428 NC_014834.1 3663662 3664885 D TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: xau:Xaut_3280 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 3663662..3664885 Rhodopseudomonas palustris DX-1 10065657 YP_004109732.1 CDS Rpdx1_3429 NC_014834.1 3664882 3665274 D PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: mdi:METDI1514 putative cobalamin biosynthesis protein; cobalamin (vitamin B12) biosynthesis protein CbiG 3664882..3665274 Rhodopseudomonas palustris DX-1 10065658 YP_004109733.1 CDS Rpdx1_3430 NC_014834.1 3665271 3666050 D TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: rec:RHECIAT_PA0000372 precorrin-4 c(11)-methyltransferase protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 3665271..3666050 Rhodopseudomonas palustris DX-1 10065659 YP_004109734.1 CDS Rpdx1_3431 NC_014834.1 3666037 3667398 D KEGG: pde:Pden_2541 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid a,c-diamide synthase 3666037..3667398 Rhodopseudomonas palustris DX-1 10065660 YP_004109735.1 CDS Rpdx1_3432 NC_014834.1 3667398 3668147 D KEGG: sil:SPO2873 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C-methyltransferase 3667398..3668147 Rhodopseudomonas palustris DX-1 10065661 YP_004109736.1 CDS Rpdx1_3433 NC_014834.1 3668186 3669142 R KEGG: nha:Nham_3728 periplasmic binding protein; manually curated; PFAM: periplasmic binding protein; periplasmic-binding protein complement(3668186..3669142) Rhodopseudomonas palustris DX-1 10065662 YP_004109737.1 CDS Rpdx1_3434 NC_014834.1 3669502 3670011 R PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mag:amb3574 hypothetical protein; hemerythrin HHE cation-binding domain-containing protein complement(3669502..3670011) Rhodopseudomonas palustris DX-1 10065663 YP_004109738.1 CDS Rpdx1_3435 NC_014834.1 3670028 3671308 R KEGG: mag:amb3575 hypothetical protein; hypothetical protein complement(3670028..3671308) Rhodopseudomonas palustris DX-1 10065664 YP_004109739.1 CDS Rpdx1_3436 NC_014834.1 3671305 3671595 R KEGG: mag:amb3576 hypothetical protein; hypothetical protein complement(3671305..3671595) Rhodopseudomonas palustris DX-1 10065665 YP_004109740.1 CDS Rpdx1_3437 NC_014834.1 3671682 3672152 R KEGG: pla:Plav_1007 hypothetical protein; hypothetical protein complement(3671682..3672152) Rhodopseudomonas palustris DX-1 10065666 YP_004109741.1 CDS Rpdx1_3438 NC_014834.1 3672191 3673189 R PFAM: ApbE family lipoprotein; KEGG: oca:OCAR_5025 NosX; ApbE family lipoprotein complement(3672191..3673189) Rhodopseudomonas palustris DX-1 10065667 YP_004109742.1 CDS Rpdx1_3439 NC_014834.1 3673201 3673752 R KEGG: bja:blr0319 NosL protein; NosL protein complement(3673201..3673752) Rhodopseudomonas palustris DX-1 10065668 YP_004109743.1 CDS Rpdx1_3440 NC_014834.1 3673749 3674576 R KEGG: bja:blr0318 nitrous oxide metabolic protein; nitrous oxide metabolic protein complement(3673749..3674576) Rhodopseudomonas palustris DX-1 10065669 YP_004109744.1 CDS Rpdx1_3441 NC_014834.1 3674573 3675478 R KEGG: bja:blr0317 copper ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3674573..3675478) Rhodopseudomonas palustris DX-1 10065670 YP_004109745.1 CDS Rpdx1_3442 NC_014834.1 3675475 3676839 R KEGG: bja:blr0316 periplasmic copper-binding precursor; PFAM: periplasmic copper-binding; SMART: Carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat; copper-binding protein complement(3675475..3676839) Rhodopseudomonas palustris DX-1 10065671 YP_004109746.1 CDS Rpdx1_3443 NC_014834.1 3676842 3678779 R KEGG: bja:blr0315 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II; nitrous-oxide reductase complement(3676842..3678779) Rhodopseudomonas palustris DX-1 10065672 YP_004109747.1 CDS Rpdx1_3444 NC_014834.1 3678797 3681091 R PFAM: FMN-binding domain protein; KEGG: bja:blr0314 nitrous oxide reductase expression regulator; nitrous oxide expression regulator NosR complement(3678797..3681091) Rhodopseudomonas palustris DX-1 10065673 YP_004109748.1 CDS Rpdx1_3445 NC_014834.1 3681231 3682136 D KEGG: oca:OCAR_5032 hypothetical protein; hypothetical protein 3681231..3682136 Rhodopseudomonas palustris DX-1 10065674 YP_004109749.1 CDS Rpdx1_3446 NC_014834.1 3682198 3682482 D KEGG: rme:Rmet_4922 hypothetical protein; hypothetical protein 3682198..3682482 Rhodopseudomonas palustris DX-1 10065675 YP_004109750.1 CDS Rpdx1_3447 NC_014834.1 3682564 3682869 R KEGG: bbt:BBta_3741 hypothetical protein; hypothetical protein complement(3682564..3682869) Rhodopseudomonas palustris DX-1 10065676 YP_004109751.1 CDS Rpdx1_3448 NC_014834.1 3683019 3683183 R KEGG: dac:Daci_2667 binding-protein-dependent transport systems inner membrane component; hypothetical protein complement(3683019..3683183) Rhodopseudomonas palustris DX-1 10065677 YP_004109752.1 CDS Rpdx1_3449 NC_014834.1 3683402 3683854 R PFAM: NUDIX hydrolase; KEGG: mea:Mex_2p0985 hypothetical protein; NUDIX hydrolase complement(3683402..3683854) Rhodopseudomonas palustris DX-1 10065678 YP_004109753.1 CDS Rpdx1_3450 NC_014834.1 3683940 3687119 R KEGG: oca:OCAR_7726 cation efflux system protein CzcA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump complement(3683940..3687119) Rhodopseudomonas palustris DX-1 10065679 YP_004109754.1 CDS Rpdx1_3451 NC_014834.1 3687150 3688145 R KEGG: oca:OCAR_7727 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3687150..3688145) Rhodopseudomonas palustris DX-1 10065680 YP_004109755.1 CDS Rpdx1_3452 NC_014834.1 3688142 3689413 R PFAM: outer membrane efflux protein; KEGG: oca:OCAR_7728 outer membrane efflux protein; outer membrane efflux protein complement(3688142..3689413) Rhodopseudomonas palustris DX-1 10065681 YP_004109756.1 CDS Rpdx1_3453 NC_014834.1 3689468 3689827 R KEGG: nwi:Nwi_1454 hypothetical protein; hypothetical protein complement(3689468..3689827) Rhodopseudomonas palustris DX-1 10065682 YP_004109757.1 CDS Rpdx1_3454 NC_014834.1 3689949 3690491 R PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_0929 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3689949..3690491) Rhodopseudomonas palustris DX-1 10065683 YP_004109758.1 CDS Rpdx1_3455 NC_014834.1 3690516 3692990 R KEGG: bid:Bind_0928 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; Ornithine decarboxylase complement(3690516..3692990) Rhodopseudomonas palustris DX-1 10065684 YP_004109759.1 CDS Rpdx1_3456 NC_014834.1 3693232 3694446 R KEGG: nha:Nham_4501 hypothetical protein; hypothetical protein complement(3693232..3694446) Rhodopseudomonas palustris DX-1 10065685 YP_004109760.1 CDS Rpdx1_3457 NC_014834.1 3694439 3696508 R PFAM: Pseudomurein-binding repeat; KEGG: pap:PSPA7_5332 Sea12; Pseudomurein-binding repeat complement(3694439..3696508) Rhodopseudomonas palustris DX-1 10065686 YP_004109761.1 CDS Rpdx1_3458 NC_014834.1 3696505 3699288 R KEGG: pap:PSPA7_5334 type II restriction enzyme, methylase subunit; type II restriction enzyme, methylase subunit complement(3696505..3699288) Rhodopseudomonas palustris DX-1 10065687 YP_004109762.1 CDS Rpdx1_3459 NC_014834.1 3700274 3700876 R KEGG: bbt:BBta_6040 hypothetical protein; hypothetical protein complement(3700274..3700876) Rhodopseudomonas palustris DX-1 10065689 YP_004109763.1 CDS Rpdx1_3460 NC_014834.1 3701018 3702310 R KEGG: pag:PLES_55611 putative C4-dicarboxylate transporter; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(3701018..3702310) Rhodopseudomonas palustris DX-1 10065690 YP_004109764.1 CDS Rpdx1_3461 NC_014834.1 3702307 3702864 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: hch:HCH_06606 TRAP-type C4-dicarboxylate transport system, small permease component; tripartite AtP-independent periplasmic transporter subunit DctQ complement(3702307..3702864) Rhodopseudomonas palustris DX-1 10065691 YP_004109765.1 CDS Rpdx1_3462 NC_014834.1 3702928 3703926 R KEGG: psa:PST_0078 C4 dicarboxylate binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; TRAP dicarboxylate transporter subunit DctP complement(3702928..3703926) Rhodopseudomonas palustris DX-1 10065692 YP_004109766.1 CDS Rpdx1_3463 NC_014834.1 3704152 3705726 R KEGG: bra:BRADO5528 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase complement(3704152..3705726) Rhodopseudomonas palustris DX-1 10065693 YP_004109767.1 CDS Rpdx1_3464 NC_014834.1 3706225 3707235 D SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: mlo:mll5831 biotin synthetase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; biotin synthase 3706225..3707235 Rhodopseudomonas palustris DX-1 10065694 YP_004109768.1 CDS Rpdx1_3465 NC_014834.1 3707417 3707911 R PFAM: GCN5-related N-acetyltransferase; KEGG: nhl:Nhal_3981 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3707417..3707911) Rhodopseudomonas palustris DX-1 10065695 YP_004109769.1 CDS Rpdx1_3466 NC_014834.1 3707908 3708198 R PFAM: Protein of unknown function DUF1778; KEGG: pph:Ppha_1718 protein of unknown function DUF1778; hypothetical protein complement(3707908..3708198) Rhodopseudomonas palustris DX-1 10065696 YP_004109770.1 CDS Rpdx1_3467 NC_014834.1 3708372 3709088 R KEGG: nha:Nham_2717 hypothetical protein; hypothetical protein complement(3708372..3709088) Rhodopseudomonas palustris DX-1 10065697 YP_004109771.1 CDS Rpdx1_3468 NC_014834.1 3709099 3710124 R SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_6066 ABC transporter substrate-binding protein; family 3 extracellular solute-binding protein complement(3709099..3710124) Rhodopseudomonas palustris DX-1 10065698 YP_004109772.1 CDS Rpdx1_3469 NC_014834.1 3710183 3710977 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_6067 ABC transporter permease; binding-protein-dependent transporter inner membrane component complement(3710183..3710977) Rhodopseudomonas palustris DX-1 10065699 YP_004109773.1 CDS Rpdx1_3471 NC_014834.1 3711198 3712004 R KEGG: bja:bll6488 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3711198..3712004) Rhodopseudomonas palustris DX-1 10065701 YP_004109774.1 CDS Rpdx1_3472 NC_014834.1 3712127 3712900 D KEGG: nha:Nham_2718 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3712127..3712900 Rhodopseudomonas palustris DX-1 10065702 YP_004109775.1 CDS Rpdx1_3473 NC_014834.1 3712897 3714444 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO5551 putative glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein); glycine betaine ABC transporter substrate-binding protein 3712897..3714444 Rhodopseudomonas palustris DX-1 10065703 YP_004109776.1 CDS Rpdx1_3474 NC_014834.1 3714466 3715317 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO5556 oxidoreductase; short-chain dehydrogenase/reductase SDR complement(3714466..3715317) Rhodopseudomonas palustris DX-1 10065704 YP_004109777.1 CDS Rpdx1_3475 NC_014834.1 3715442 3716674 R PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO0975 branched chain amino acid ABC transporter periplasmic-binding protein; extracellular ligand-binding receptor complement(3715442..3716674) Rhodopseudomonas palustris DX-1 10065705 YP_004109778.1 CDS Rpdx1_3476 NC_014834.1 3716773 3717507 R KEGG: bpy:Bphyt_6461 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(3716773..3717507) Rhodopseudomonas palustris DX-1 10065706 YP_004109779.1 CDS Rpdx1_3477 NC_014834.1 3717888 3718907 R TIGRFAM: ketol-acid reductoisomerase; KEGG: bja:bll6497 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase complement(3717888..3718907) Rhodopseudomonas palustris DX-1 10065707 YP_004109780.1 CDS Rpdx1_3478 NC_014834.1 3719055 3719657 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bja:bll6498 hypothetical protein; lysine exporter protein LysE/YggA complement(3719055..3719657) Rhodopseudomonas palustris DX-1 10065708 YP_004109781.1 CDS Rpdx1_3479 NC_014834.1 3719667 3720542 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:bll6499 putative amino acid metabolite efflux pump; hypothetical protein complement(3719667..3720542) Rhodopseudomonas palustris DX-1 10065709 YP_004109782.1 CDS Rpdx1_3480 NC_014834.1 3720754 3721152 D PFAM: Host attachment protein; KEGG: xcv:XCV0079 hypothetical protein; host attachment protein 3720754..3721152 Rhodopseudomonas palustris DX-1 10065710 YP_004109783.1 CDS Rpdx1_3481 NC_014834.1 3721243 3721785 R KEGG: bra:BRADO5562 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; acetolactate synthase small subunit complement(3721243..3721785) Rhodopseudomonas palustris DX-1 10065711 YP_004109784.1 CDS Rpdx1_3482 NC_014834.1 3722010 3723788 R KEGG: bra:BRADO5564 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; acetolactate synthase large subunit, biosynthetic type complement(3722010..3723788) Rhodopseudomonas palustris DX-1 10065712 YP_004109785.1 CDS Rpdx1_3483 NC_014834.1 3724158 3725108 R PFAM: tRNA isopentenyltransferase; manually curated; KEGG: nha:Nham_2723 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(3724158..3725108) Rhodopseudomonas palustris DX-1 10065713 YP_004109786.1 CDS Rpdx1_3484 NC_014834.1 3725107 3726000 D TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: bja:blr6505 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 3725107..3726000 Rhodopseudomonas palustris DX-1 10065714 YP_004109787.1 CDS Rpdx1_3485 NC_014834.1 3726028 3726657 R KEGG: mno:Mnod_4564 hypothetical protein; hypothetical protein complement(3726028..3726657) Rhodopseudomonas palustris DX-1 10065715 YP_004109788.1 CDS Rpdx1_3486 NC_014834.1 3726940 3728691 D PFAM: HerA-ATP synthase, barrel domain; KEGG: bja:bll3818 hypothetical protein; HerA-ATP synthase, barrel domain 3726940..3728691 Rhodopseudomonas palustris DX-1 10065716 YP_004109789.1 CDS Rpdx1_3487 NC_014834.1 3728833 3729417 D KEGG: bbt:BBta_3525 hypothetical protein; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; hypothetical protein 3728833..3729417 Rhodopseudomonas palustris DX-1 10065717 YP_004109790.1 CDS Rpdx1_3488 NC_014834.1 3729454 3729933 D PFAM: MgtC/SapB transporter; KEGG: bja:bll3816 putative sulfur-regulated protein; MgtC/SapB transporter 3729454..3729933 Rhodopseudomonas palustris DX-1 10065718 YP_004109791.1 CDS Rpdx1_3489 NC_014834.1 3730111 3730464 D KEGG: bra:BRADO4674 hypothetical protein; hypothetical protein 3730111..3730464 Rhodopseudomonas palustris DX-1 10065719 YP_004109792.1 CDS Rpdx1_3490 NC_014834.1 3730636 3730917 D PFAM: phosphopantetheine-binding; KEGG: nha:Nham_1506 acyl carrier protein; phosphopantetheine-binding protein 3730636..3730917 Rhodopseudomonas palustris DX-1 10065720 YP_004109793.1 CDS Rpdx1_3491 NC_014834.1 3730945 3731415 D PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: nwi:Nwi_1245 3-hydroxymyristoyl-acyl carrier protein dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 3730945..3731415 Rhodopseudomonas palustris DX-1 10065721 YP_004109794.1 CDS Rpdx1_3492 NC_014834.1 3731408 3732616 D PFAM: Beta-ketoacyl synthase; KEGG: nha:Nham_1504 3-oxoacyl-(acyl carrier protein) synthase II; beta-ketoacyl synthase 3731408..3732616 Rhodopseudomonas palustris DX-1 10065722 YP_004109795.1 CDS Rpdx1_3493 NC_014834.1 3732627 3733907 D PFAM: Beta-ketoacyl synthase; KEGG: nha:Nham_1503 3-oxoacyl-(acyl carrier protein) synthase II; beta-ketoacyl synthase 3732627..3733907 Rhodopseudomonas palustris DX-1 10065723 YP_004109796.1 CDS Rpdx1_3494 NC_014834.1 3734004 3735026 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: oca:OCAR_6502 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 3734004..3735026 Rhodopseudomonas palustris DX-1 10065724 YP_004109797.1 CDS Rpdx1_3495 NC_014834.1 3735026 3735958 D PFAM: lipid A biosynthesis acyltransferase; KEGG: nha:Nham_1502 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase 3735026..3735958 Rhodopseudomonas palustris DX-1 10065725 YP_004109798.1 CDS Rpdx1_3496 NC_014834.1 3736304 3738256 D KEGG: psl:Psta_1421 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 3736304..3738256 Rhodopseudomonas palustris DX-1 10065726 YP_004109799.1 CDS Rpdx1_3497 NC_014834.1 3738270 3739385 R PFAM: extracellular solute-binding protein family 1; KEGG: bbt:BBta_3516 putrescine ABC transporter, periplasmic binding protein; family 1 extracellular solute-binding protein complement(3738270..3739385) Rhodopseudomonas palustris DX-1 10065727 YP_004109800.1 CDS Rpdx1_3498 NC_014834.1 3739393 3740550 R PFAM: aminotransferase class I and II; KEGG: bbt:BBta_3515 hypothetical protein; class I/II aminotransferase complement(3739393..3740550) Rhodopseudomonas palustris DX-1 10065728 YP_004109801.1 CDS Rpdx1_3499 NC_014834.1 3740573 3741028 R SMART: Rhodanese domain protein; KEGG: bja:blr3804 hypothetical protein; rhodanese domain-containing protein complement(3740573..3741028) Rhodopseudomonas palustris DX-1 10065729 YP_004109802.1 CDS Rpdx1_3500 NC_014834.1 3741093 3741914 R PFAM: OmpA/MotB domain protein; KEGG: nha:Nham_1496 OmpA/MotB; OmpA/MotB domain-containing protein complement(3741093..3741914) Rhodopseudomonas palustris DX-1 10065730 YP_004109803.1 CDS Rpdx1_3501 NC_014834.1 3741943 3742716 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: bra:BRADO4687 putative chemotaxis protein MotA (flagellar motor component); MotA/TolQ/ExbB proton channel complement(3741943..3742716) Rhodopseudomonas palustris DX-1 10065731 YP_004109804.1 CDS Rpdx1_3502 NC_014834.1 3743017 3743937 R KEGG: bja:blr3797 phosphatidylserine synthase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(3743017..3743937) Rhodopseudomonas palustris DX-1 10065732 YP_004109805.1 CDS Rpdx1_3503 NC_014834.1 3743971 3744669 R TIGRFAM: phosphatidylserine decarboxylase related protein; KEGG: oca:OCAR_6512 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase complement(3743971..3744669) Rhodopseudomonas palustris DX-1 10065733 YP_004109806.1 CDS Rpdx1_3504 NC_014834.1 3744718 3746715 R KEGG: bja:blr3795 ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein complement(3744718..3746715) Rhodopseudomonas palustris DX-1 10065734 YP_004109807.1 CDS Rpdx1_3505 NC_014834.1 3746913 3747512 D PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_1232 hypothetical protein; hypothetical protein 3746913..3747512 Rhodopseudomonas palustris DX-1 10065735 YP_004109808.1 CDS Rpdx1_3506 NC_014834.1 3747696 3749765 D KEGG: xau:Xaut_1071 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; gluconate 2-dehydrogenase 3747696..3749765 Rhodopseudomonas palustris DX-1 10065736 YP_004109809.1 CDS Rpdx1_3507 NC_014834.1 3749790 3751199 R PFAM: FAD linked oxidase domain protein; KEGG: pla:Plav_2705 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein complement(3749790..3751199) Rhodopseudomonas palustris DX-1 10065737 YP_004109810.1 CDS Rpdx1_3508 NC_014834.1 3751211 3752770 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pla:Plav_0755 hypothetical protein; thiamine pyrophosphate domain-containing TPP-binding protein complement(3751211..3752770) Rhodopseudomonas palustris DX-1 10065738 YP_004109811.1 CDS Rpdx1_3509 NC_014834.1 3753024 3754622 R KEGG: nwi:Nwi_1231 putative alpha-isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; 2-isopropylmalate synthase complement(3753024..3754622) Rhodopseudomonas palustris DX-1 10065739 YP_004109812.1 CDS Rpdx1_3510 NC_014834.1 3754619 3755128 R PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_3500 acetyltransferase; N-acetyltransferase GCN5 complement(3754619..3755128) Rhodopseudomonas palustris DX-1 10065740 YP_004109813.1 CDS Rpdx1_3511 NC_014834.1 3755128 3755259 R KEGG: bbt:BBta_3499 hypothetical protein; hypothetical protein complement(3755128..3755259) Rhodopseudomonas palustris DX-1 10065741 YP_004109814.1 CDS Rpdx1_3512 NC_014834.1 3755423 3756814 R TIGRFAM: cysteinyl-tRNA synthetase; KEGG: bbt:BBta_3498 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; cysteinyl-tRNA synthetase complement(3755423..3756814) Rhodopseudomonas palustris DX-1 10065742 YP_004109815.1 CDS Rpdx1_3513 NC_014834.1 3757245 3757553 D KEGG: bja:bll3789 hypothetical protein; hypothetical protein 3757245..3757553 Rhodopseudomonas palustris DX-1 10065743 YP_004109816.1 CDS Rpdx1_3514 NC_014834.1 3757742 3758893 D KEGG: nha:Nham_1486 hypothetical protein; hypothetical protein 3757742..3758893 Rhodopseudomonas palustris DX-1 10065744 YP_004109817.1 CDS Rpdx1_3515 NC_014834.1 3758991 3760325 D PFAM: amine oxidase; KEGG: nca:Noca_3672 protoporphyrinogen oxidase; amine oxidase 3758991..3760325 Rhodopseudomonas palustris DX-1 10065745 YP_004109818.1 CDS Rpdx1_3516 NC_014834.1 3760350 3761012 R KEGG: pag:PLES_09021 putative transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator complement(3760350..3761012) Rhodopseudomonas palustris DX-1 10065746 YP_004109819.1 CDS Rpdx1_3517 NC_014834.1 3761089 3761550 D PFAM: SpoVT/AbrB domain protein; KEGG: rec:RHECIAT_CH0002963 hypothetical protein; SpoVT/AbrB domain-containing protein 3761089..3761550 Rhodopseudomonas palustris DX-1 10065747 YP_004109820.1 CDS Rpdx1_3518 NC_014834.1 3761547 3761957 D PFAM: PilT protein domain protein; KEGG: rec:RHECIAT_CH0002962 hypothetical protein; PilT domain-containing protein 3761547..3761957 Rhodopseudomonas palustris DX-1 10065748 YP_004109821.1 CDS Rpdx1_3519 NC_014834.1 3762080 3762676 D KEGG: shw:Sputw3181_4076 hypothetical protein; hypothetical protein 3762080..3762676 Rhodopseudomonas palustris DX-1 10065749 YP_004109822.1 CDS Rpdx1_3520 NC_014834.1 3762701 3764458 R TIGRFAM: NAD+ synthetase; KEGG: nha:Nham_1485 NAD synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase complement(3762701..3764458) Rhodopseudomonas palustris DX-1 10065750 YP_004109823.1 CDS Rpdx1_3521 NC_014834.1 3764505 3764960 R PFAM: diacylglycerol kinase; KEGG: nha:Nham_1484 diacylglycerol kinase; diacylglycerol kinase complement(3764505..3764960) Rhodopseudomonas palustris DX-1 10065751 YP_004109824.1 CDS Rpdx1_3522 NC_014834.1 3765187 3766575 R TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bja:blr3778 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3765187..3766575) Rhodopseudomonas palustris DX-1 10065752 YP_004109825.1 CDS Rpdx1_3523 NC_014834.1 3766763 3768148 R KEGG: nha:Nham_1482 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; glutathione-disulfide reductase complement(3766763..3768148) Rhodopseudomonas palustris DX-1 10065753 YP_004109826.1 CDS Rpdx1_3524 NC_014834.1 3768166 3768675 R PFAM: Protein of unknown function DUF2059; KEGG: nwi:Nwi_1222 hypothetical protein; hypothetical protein complement(3768166..3768675) Rhodopseudomonas palustris DX-1 10065754 YP_004109827.1 CDS Rpdx1_3525 NC_014834.1 3768702 3769400 R TIGRFAM: ribose 5-phosphate isomerase; KEGG: oca:OCAR_6529 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase complement(3768702..3769400) Rhodopseudomonas palustris DX-1 10065755 YP_004109828.1 CDS Rpdx1_3526 NC_014834.1 3769548 3770225 D KEGG: bbt:BBta_3482 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase 3769548..3770225 Rhodopseudomonas palustris DX-1 10065756 YP_004109829.1 CDS Rpdx1_3527 NC_014834.1 3770337 3770834 D KEGG: nha:Nham_1478 hypothetical protein; hypothetical protein 3770337..3770834 Rhodopseudomonas palustris DX-1 10065757 YP_004109830.1 CDS Rpdx1_3528 NC_014834.1 3770953 3771987 D TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: bja:bll3752 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 3770953..3771987 Rhodopseudomonas palustris DX-1 10065758 YP_004109831.1 CDS Rpdx1_3529 NC_014834.1 3772174 3772770 D PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: oca:OCAR_6533 tripartite ATP-independent periplasmic transporter; tripartite AtP-independent periplasmic transporter subunit DctQ 3772174..3772770 Rhodopseudomonas palustris DX-1 10065759 YP_004109832.1 CDS Rpdx1_3530 NC_014834.1 3772808 3774649 D KEGG: oca:OCAR_6534 trap dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 3772808..3774649 Rhodopseudomonas palustris DX-1 10065760 YP_004109833.1 CDS Rpdx1_3531 NC_014834.1 3774831 3775922 R PFAM: Extracellular solute-binding protein, family 7; KEGG: bbt:BBta_3466 putative periplasmic mannitol-binding protein; family 7 extracellular solute-binding protein complement(3774831..3775922) Rhodopseudomonas palustris DX-1 10065761 YP_004109834.1 CDS Rpdx1_3532 NC_014834.1 3776173 3777288 R PFAM: ATPase-like, ParA/MinD; KEGG: bja:blr3742 multidrug-resistance related protein; ParA/MinD-like ATPase complement(3776173..3777288) Rhodopseudomonas palustris DX-1 10065762 YP_004109835.1 CDS Rpdx1_3533 NC_014834.1 3777581 3778450 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bra:BRADO4737 putative oxidoreductase; putative 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase protein 3777581..3778450 Rhodopseudomonas palustris DX-1 10065763 YP_004109836.1 CDS Rpdx1_3534 NC_014834.1 3778619 3780211 D KEGG: nha:Nham_1469 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3778619..3780211 Rhodopseudomonas palustris DX-1 10065764 YP_004109837.1 CDS Rpdx1_3535 NC_014834.1 3780256 3780480 D PFAM: protein of unknown function DUF1289; KEGG: bja:bsl3737 hypothetical protein; hypothetical protein 3780256..3780480 Rhodopseudomonas palustris DX-1 10065765 YP_004109838.1 CDS Rpdx1_3536 NC_014834.1 3780503 3781039 D KEGG: nwi:Nwi_1211 hypothetical protein; hypothetical protein 3780503..3781039 Rhodopseudomonas palustris DX-1 10065766 YP_004109839.1 CDS Rpdx1_3537 NC_014834.1 3781051 3782046 R manually curated; TIGRFAM: TIM-barrel protein, yjbN family; KEGG: bra:BRADO4745 tRNA-dihydrouridine synthase A; PFAM: dihydrouridine synthase DuS; yjbN family TIM-barrel protein complement(3781051..3782046) Rhodopseudomonas palustris DX-1 10065767 YP_004109840.1 CDS Rpdx1_3538 NC_014834.1 3782158 3785313 R PFAM: acriflavin resistance protein; KEGG: nha:Nham_1082 acriflavin resistance protein; acriflavin resistance protein complement(3782158..3785313) Rhodopseudomonas palustris DX-1 10065768 YP_004109841.1 CDS Rpdx1_3539 NC_014834.1 3785313 3786428 R KEGG: bra:BRADO1901 putative component of multidrug efflux system; putative signal peptide; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3785313..3786428) Rhodopseudomonas palustris DX-1 10065769 YP_004109842.1 CDS Rpdx1_3540 NC_014834.1 3786592 3787224 D PFAM: regulatory protein TetR; KEGG: psp:PSPPH_3268 TetR family transcriptional regulator; regulatory protein TetR 3786592..3787224 Rhodopseudomonas palustris DX-1 10065770 YP_004109843.1 CDS Rpdx1_3541 NC_014834.1 3787496 3789484 D KEGG: ret:RHE_CH02959 adenylate cyclase protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; adenylate/guanylate cyclase with integral membrane sensor 3787496..3789484 Rhodopseudomonas palustris DX-1 10065771 YP_004109844.1 CDS Rpdx1_3542 NC_014834.1 3789509 3790066 R KEGG: bja:blr4686 hypothetical protein; hypothetical protein complement(3789509..3790066) Rhodopseudomonas palustris DX-1 10065772 YP_004109845.1 CDS Rpdx1_3543 NC_014834.1 3790125 3791318 R PFAM: Patatin; KEGG: oca:OCAR_4867 patatin; patatin complement(3790125..3791318) Rhodopseudomonas palustris DX-1 10065773 YP_004109846.1 CDS Rpdx1_3544 NC_014834.1 3791350 3791631 R KEGG: bpm:BURPS1710b_A0059 thiaminase I precursor; hypothetical protein complement(3791350..3791631) Rhodopseudomonas palustris DX-1 10065774 YP_004109847.1 CDS Rpdx1_3545 NC_014834.1 3791633 3794683 R PFAM: acriflavin resistance protein; KEGG: bbt:BBta_2039 RND family mulitdrug efflux protein; acriflavin resistance protein complement(3791633..3794683) Rhodopseudomonas palustris DX-1 10065775 YP_004109848.1 CDS Rpdx1_3546 NC_014834.1 3794680 3795753 R KEGG: bbt:BBta_2040 RND family mulitdrug efflux protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3794680..3795753) Rhodopseudomonas palustris DX-1 10065776 YP_004109849.1 CDS Rpdx1_3547 NC_014834.1 3795750 3796838 R KEGG: bra:BRADO1729 RND family mulitdrug efflux protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3795750..3796838) Rhodopseudomonas palustris DX-1 10065777 YP_004109850.1 CDS Rpdx1_3548 NC_014834.1 3796917 3797540 D PFAM: regulatory protein TetR; KEGG: xau:Xaut_4925 TetR family transcriptional regulator; TetR family transcriptional regulator 3796917..3797540 Rhodopseudomonas palustris DX-1 10065778 YP_004109851.1 CDS Rpdx1_3549 NC_014834.1 3797653 3798669 D PFAM: Luciferase-like, subgroup; KEGG: azc:AZC_4553 putative alkanal monooxygenase; luciferase-like protein 3797653..3798669 Rhodopseudomonas palustris DX-1 10065779 YP_004109852.1 CDS Rpdx1_3550 NC_014834.1 3798795 3800318 D SMART: AAA ATPase; KEGG: bra:BRADO5753 putative ATPase; AAA ATPase 3798795..3800318 Rhodopseudomonas palustris DX-1 10065780 YP_004109853.1 CDS Rpdx1_3551 NC_014834.1 3800416 3801525 D KEGG: bbt:BBta_5970 alcohol dehydrogenase class III; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3800416..3801525 Rhodopseudomonas palustris DX-1 10065781 YP_004109854.1 CDS Rpdx1_3552 NC_014834.1 3801647 3802825 R TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: bbt:BBta_6304 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB; coenzyme PQQ biosynthesis protein E complement(3801647..3802825) Rhodopseudomonas palustris DX-1 10065782 YP_004109855.1 CDS Rpdx1_3553 NC_014834.1 3802822 3803130 R KEGG: bra:BRADO5796 coenzyme PQQ synthesis protein D (pyrroloquinoline quinone biosynthesis protein D)(PqqD); coenzyme PQQ synthesis protein D complement(3802822..3803130) Rhodopseudomonas palustris DX-1 10065783 YP_004109856.1 CDS Rpdx1_3554 NC_014834.1 3803135 3803899 R TIGRFAM: coenzyme PQQ biosynthesis protein C; KEGG: bja:blr6737 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 domain protein; coenzyme PQQ biosynthesis protein C complement(3803135..3803899) Rhodopseudomonas palustris DX-1 10065784 YP_004109857.1 CDS Rpdx1_3555 NC_014834.1 3803896 3804822 R TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: bja:blr6736 pyrroloquinoline quinone biosynthesis protein PqqB; coenzyme PQQ biosynthesis protein B complement(3803896..3804822) Rhodopseudomonas palustris DX-1 10065785 YP_004109858.1 CDS Rpdx1_3556 NC_014834.1 3804944 3805024 R manually curated; TIGRFAM: coenzyme PQQ biosynthesis protein A; KEGG: bbt:BBta_6300 pyrroloquinoline quinone biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A complement(3804944..3805024) Rhodopseudomonas palustris DX-1 10065786 YP_004109859.1 CDS Rpdx1_3557 NC_014834.1 3805298 3806029 D KEGG: bja:bll3158 transcriptional regulatory protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3805298..3806029 Rhodopseudomonas palustris DX-1 10065787 YP_004109860.1 CDS Rpdx1_3558 NC_014834.1 3806146 3807423 D KEGG: bja:bll3156 formyl-coenzyme A transferase; TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; formyl-CoA transferase 3806146..3807423 Rhodopseudomonas palustris DX-1 10065788 YP_004109861.1 CDS Rpdx1_3559 NC_014834.1 3807515 3808495 D TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bja:bll3147 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 3807515..3808495 Rhodopseudomonas palustris DX-1 10065789 YP_004109862.1 CDS Rpdx1_3560 NC_014834.1 3808652 3809437 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bja:bll3146 hypothetical protein; fumarylacetoacetate (FAA) hydrolase 3808652..3809437 Rhodopseudomonas palustris DX-1 10065790 YP_004109863.1 CDS Rpdx1_3561 NC_014834.1 3809682 3810677 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: bja:bll3143 hypothetical protein; 2-nitropropane dioxygenase 3809682..3810677 Rhodopseudomonas palustris DX-1 10065791 YP_004109864.1 CDS Rpdx1_3562 NC_014834.1 3810723 3811691 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bra:BRADO4966 putative NADPH quinone oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 3810723..3811691 Rhodopseudomonas palustris DX-1 10065792 YP_004109865.1 CDS Rpdx1_3563 NC_014834.1 3811818 3813197 D KEGG: nha:Nham_1450 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 3811818..3813197 Rhodopseudomonas palustris DX-1 10065793 YP_004109866.1 CDS Rpdx1_3564 NC_014834.1 3813417 3815726 D KEGG: nha:Nham_1449 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 3813417..3815726 Rhodopseudomonas palustris DX-1 10065794 YP_004109867.1 CDS Rpdx1_3565 NC_014834.1 3815977 3819453 R KEGG: azc:AZC_3227 putative outer membrane autotransporter barrel precursor; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; outer membrane autotransporter barrel domain-containing protein complement(3815977..3819453) Rhodopseudomonas palustris DX-1 10065795 YP_004109868.1 CDS Rpdx1_3566 NC_014834.1 3819863 3820885 D KEGG: mpo:Mpop_2366 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3819863..3820885 Rhodopseudomonas palustris DX-1 10065796 YP_004109869.1 CDS Rpdx1_3567 NC_014834.1 3820965 3821234 D KEGG: bbt:BBta_2046 hypothetical protein; hypothetical protein 3820965..3821234 Rhodopseudomonas palustris DX-1 10065797 YP_004109870.1 CDS Rpdx1_3568 NC_014834.1 3821294 3824266 R KEGG: nwi:Nwi_1199 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase complement(3821294..3824266) Rhodopseudomonas palustris DX-1 10065798 YP_004109871.1 CDS Rpdx1_3569 NC_014834.1 3824263 3825708 R KEGG: bbt:BBta_3085 putative two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(3824263..3825708) Rhodopseudomonas palustris DX-1 10065799 YP_004109872.1 CDS Rpdx1_3570 NC_014834.1 3825967 3827253 R KEGG: rru:Rru_A1802 chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer complement(3825967..3827253) Rhodopseudomonas palustris DX-1 10065800 YP_004109873.1 CDS Rpdx1_3571 NC_014834.1 3827371 3828096 R KEGG: bbt:BBta_3078 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator complement(3827371..3828096) Rhodopseudomonas palustris DX-1 10065801 YP_004109874.1 CDS Rpdx1_3572 NC_014834.1 3828332 3829900 R SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bra:BRADO2741 putative serine protease do-like precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(3828332..3829900) Rhodopseudomonas palustris DX-1 10065802 YP_004109875.1 CDS Rpdx1_3573 NC_014834.1 3830178 3831176 D PFAM: ferredoxin; KEGG: mgm:Mmc1_1188 ferredoxin; ferredoxin 3830178..3831176 Rhodopseudomonas palustris DX-1 10065803 YP_004109876.1 CDS Rpdx1_3574 NC_014834.1 3831230 3831718 D KEGG: msl:Msil_3779 rubrerythrin; rubrerythrin 3831230..3831718 Rhodopseudomonas palustris DX-1 10065804 YP_004109877.1 CDS Rpdx1_3575 NC_014834.1 3831993 3833231 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rsh:Rsph17029_3566 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K 3831993..3833231 Rhodopseudomonas palustris DX-1 10065805 YP_004109878.1 CDS Rpdx1_3576 NC_014834.1 3833353 3834375 D KEGG: apt:APA01_01550 aliphatic amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; formamidase 3833353..3834375 Rhodopseudomonas palustris DX-1 10065806 YP_004109879.1 CDS Rpdx1_3577 NC_014834.1 3834501 3835694 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bbt:BBta_3438 putative secretion protein HlyD precursor; RND family efflux transporter MFP subunit complement(3834501..3835694) Rhodopseudomonas palustris DX-1 10065807 YP_004109880.1 CDS Rpdx1_3578 NC_014834.1 3835696 3838044 R PFAM: protein of unknown function DUF214; KEGG: bbt:BBta_5376 hypothetical protein; hypothetical protein complement(3835696..3838044) Rhodopseudomonas palustris DX-1 10065808 YP_004109881.1 CDS Rpdx1_3579 NC_014834.1 3838041 3838757 R KEGG: bbt:BBta_5377 putative ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(3838041..3838757) Rhodopseudomonas palustris DX-1 10065809 YP_004109882.1 CDS Rpdx1_3580 NC_014834.1 3838859 3839356 R PFAM: cytochrome C biogenesis protein; KEGG: bja:blr3128 cytochrome c-type biogenesis protein; cytochrome C biogenesis protein complement(3838859..3839356) Rhodopseudomonas palustris DX-1 10065810 YP_004109883.1 CDS Rpdx1_3581 NC_014834.1 3839370 3841352 R KEGG: nwi:Nwi_1193 cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF complement(3839370..3841352) Rhodopseudomonas palustris DX-1 10065811 YP_004109884.1 CDS Rpdx1_3582 NC_014834.1 3841349 3841852 R PFAM: CcmE/CycJ protein; KEGG: bra:BRADO2733 cytochrome c-type biogenesis protein CcmE; CcmE/CycJ protein complement(3841349..3841852) Rhodopseudomonas palustris DX-1 10065812 YP_004109885.1 CDS Rpdx1_3583 NC_014834.1 3841969 3843072 R TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: bbt:BBta_3071 cytochrome c-type biogenesis protein CycH; cytochrome c-type biogenesis protein CcmI complement(3841969..3843072) Rhodopseudomonas palustris DX-1 10065813 YP_004109886.1 CDS Rpdx1_3584 NC_014834.1 3843236 3844639 R KEGG: nha:Nham_1436 hypothetical protein; hypothetical protein complement(3843236..3844639) Rhodopseudomonas palustris DX-1 10065814 YP_004109887.1 CDS Rpdx1_3585 NC_014834.1 3844862 3845326 R KEGG: nha:Nham_1435 LipA a lipoprotein; LipA a lipoprotein complement(3844862..3845326) Rhodopseudomonas palustris DX-1 10065815 YP_004109888.1 CDS Rpdx1_3586 NC_014834.1 3845421 3846812 R KEGG: nha:Nham_1434 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase complement(3845421..3846812) Rhodopseudomonas palustris DX-1 10065816 YP_004109889.1 CDS Rpdx1_3587 NC_014834.1 3846828 3847502 R KEGG: nha:Nham_1433 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator complement(3846828..3847502) Rhodopseudomonas palustris DX-1 10065817 YP_004109890.1 CDS Rpdx1_3588 NC_014834.1 3847621 3848193 R KEGG: azc:AZC_2138 hypothetical protein; hypothetical protein complement(3847621..3848193) Rhodopseudomonas palustris DX-1 10065818 YP_004109891.1 CDS Rpdx1_3589 NC_014834.1 3848196 3848945 R KEGG: nha:Nham_1429 putative glycohydrolase; putative glycohydrolase complement(3848196..3848945) Rhodopseudomonas palustris DX-1 10065819 YP_004109892.1 CDS Rpdx1_3590 NC_014834.1 3849285 3851708 D PFAM: Radical SAM domain protein; KEGG: cyc:PCC7424_4250 radical SAM domain protein; radical SAM protein 3849285..3851708 Rhodopseudomonas palustris DX-1 10065820 YP_004109893.1 CDS Rpdx1_3591 NC_014834.1 3851720 3853066 R KEGG: nwi:Nwi_1182 hypothetical protein; hypothetical protein complement(3851720..3853066) Rhodopseudomonas palustris DX-1 10065821 YP_004109894.1 CDS Rpdx1_3592 NC_014834.1 3853079 3856951 R KEGG: nha:Nham_1426 gene transfer agent (GTA) orfg15, like protein; gene transfer agent (GTA)-like protein complement(3853079..3856951) Rhodopseudomonas palustris DX-1 10065822 YP_004109895.1 CDS Rpdx1_3593 NC_014834.1 3857080 3857649 R KEGG: rle:RL3155 putative cytochrome b561; putative cytochrome b561 complement(3857080..3857649) Rhodopseudomonas palustris DX-1 10065823 YP_004109896.1 CDS Rpdx1_3594 NC_014834.1 3857677 3858129 R KEGG: rhi:NGR_c30270 hypothetical protein; hypothetical protein complement(3857677..3858129) Rhodopseudomonas palustris DX-1 10065824 YP_004109897.1 CDS Rpdx1_3595 NC_014834.1 3858130 3858603 R KEGG: mno:Mnod_3659 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(3858130..3858603) Rhodopseudomonas palustris DX-1 10065825 YP_004109898.1 CDS Rpdx1_3596 NC_014834.1 3858758 3859225 D KEGG: dsi:Dsim_GD24223 GD24223 gene product from transcript GD24223-RA; hypothetical protein 3858758..3859225 Rhodopseudomonas palustris DX-1 10065826 YP_004109899.1 CDS Rpdx1_3597 NC_014834.1 3859264 3859689 R PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mrd:Mrad2831_2003 glutathione-dependent formaldehyde-activating GFA; glutathione-dependent formaldehyde-activating protein complement(3859264..3859689) Rhodopseudomonas palustris DX-1 10065827 YP_004109900.1 CDS Rpdx1_3598 NC_014834.1 3859755 3860207 R TIGRFAM: phage cell wall peptidase, NlpC/P60 family; KEGG: nwi:Nwi_1180 putative phage cell wall peptidase, NlpC/P60; phage cell wall peptidase, NlpC/P60 family complement(3859755..3860207) Rhodopseudomonas palustris DX-1 10065828 YP_004109901.1 CDS Rpdx1_3599 NC_014834.1 3860250 3861161 R PFAM: Phage conserved hypothetical protein, gene transfer agent-like-like; KEGG: nwi:Nwi_1179 hypothetical protein; gene transfer agent-like protein complement(3860250..3861161) Rhodopseudomonas palustris DX-1 10065829 YP_004109902.1 CDS Rpdx1_3600 NC_014834.1 3861293 3862420 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rle:pRL100302 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(3861293..3862420) Rhodopseudomonas palustris DX-1 10065830 YP_004109903.1 CDS Rpdx1_3601 NC_014834.1 3862428 3863615 R TIGRFAM: acetyl-CoA acetyltransferase; KEGG: xau:Xaut_4665 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase complement(3862428..3863615) Rhodopseudomonas palustris DX-1 10065831 YP_004109904.1 CDS Rpdx1_3602 NC_014834.1 3863676 3864443 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_4664 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3863676..3864443) Rhodopseudomonas palustris DX-1 10065832 YP_004109905.1 CDS Rpdx1_3603 NC_014834.1 3864462 3866147 R PFAM: AMP-dependent synthetase and ligase; KEGG: bcj:BCAS0739 putative acetyl-CoA synthetase; AMP-dependent synthetase and ligase complement(3864462..3866147) Rhodopseudomonas palustris DX-1 10065833 YP_004109906.1 CDS Rpdx1_3604 NC_014834.1 3866301 3867293 D KEGG: xau:Xaut_4663 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3866301..3867293 Rhodopseudomonas palustris DX-1 10065834 YP_004109907.1 CDS Rpdx1_3605 NC_014834.1 3867523 3868263 R KEGG: bra:BRADO1260 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator complement(3867523..3868263) Rhodopseudomonas palustris DX-1 10065835 YP_004109908.1 CDS Rpdx1_3606 NC_014834.1 3868404 3868964 R PFAM: flagellar FlbT family protein; KEGG: bra:BRADO7004 flagellar biosynthesis repressor FlbT; flagellar FlbT family protein complement(3868404..3868964) Rhodopseudomonas palustris DX-1 10065836 YP_004109909.1 CDS Rpdx1_3607 NC_014834.1 3869028 3871703 R PFAM: protein of unknown function DUF1522; KEGG: bja:bll5846 flagellin; hypothetical protein complement(3869028..3871703) Rhodopseudomonas palustris DX-1 10065837 YP_004109910.1 CDS Rpdx1_3608 NC_014834.1 3871902 3872540 R PFAM: conserved hypothetical protein; KEGG: nha:Nham_1423 hypothetical protein; hypothetical protein complement(3871902..3872540) Rhodopseudomonas palustris DX-1 10065838 YP_004109911.1 CDS Rpdx1_3609 NC_014834.1 3872629 3873219 R KEGG: nha:Nham_1422 gene transfer agent (GTA) like protein; gene transfer agent (GTA)-like protein complement(3872629..3873219) Rhodopseudomonas palustris DX-1 10065839 YP_004109912.1 CDS Rpdx1_3610 NC_014834.1 3873219 3873419 R KEGG: oca:OCAR_6592 hypothetical protein; hypothetical protein complement(3873219..3873419) Rhodopseudomonas palustris DX-1 10065840 YP_004109913.1 CDS Rpdx1_3611 NC_014834.1 3873416 3873733 R KEGG: nha:Nham_1420 gene transfer agent (GTA) like protein; gene transfer agent (GTA)-like protein complement(3873416..3873733) Rhodopseudomonas palustris DX-1 10065841 YP_004109914.1 CDS Rpdx1_3612 NC_014834.1 3873743 3874150 R TIGRFAM: phage major tail protein, TP901-1 family; KEGG: nha:Nham_1419 phage major tail protein, TP901-1; phage major tail protein, TP901-1 family complement(3873743..3874150) Rhodopseudomonas palustris DX-1 10065842 YP_004109915.1 CDS Rpdx1_3613 NC_014834.1 3874163 3874573 R KEGG: oca:OCAR_6595 gene transfer agent; hypothetical protein complement(3874163..3874573) Rhodopseudomonas palustris DX-1 10065843 YP_004109916.1 CDS Rpdx1_3614 NC_014834.1 3874570 3874890 R TIGRFAM: phage head-tail adaptor; KEGG: oca:OCAR_6596 putative phage head-tail adaptor; phage head-tail adaptor complement(3874570..3874890) Rhodopseudomonas palustris DX-1 10065844 YP_004109917.1 CDS Rpdx1_3615 NC_014834.1 3874887 3875456 R KEGG: nha:Nham_1417 phiE125 gp8 hypothetical protein; hypothetical protein complement(3874887..3875456) Rhodopseudomonas palustris DX-1 10065845 YP_004109918.1 CDS Rpdx1_3616 NC_014834.1 3875518 3876285 D KEGG: bbt:BBta_0650 putative serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 3875518..3876285 Rhodopseudomonas palustris DX-1 10065846 YP_004109919.1 CDS Rpdx1_3617 NC_014834.1 3876370 3876681 D KEGG: nwi:Nwi_1895 hypothetical protein; hypothetical protein 3876370..3876681 Rhodopseudomonas palustris DX-1 10065847 YP_004109920.1 CDS Rpdx1_3618 NC_014834.1 3876695 3877990 R KEGG: azc:AZC_1105 hypothetical protein; hypothetical protein complement(3876695..3877990) Rhodopseudomonas palustris DX-1 10065848 YP_004109921.1 CDS Rpdx1_3619 NC_014834.1 3877932 3878888 R KEGG: oca:OCAR_6612 hypothetical protein; hypothetical protein complement(3877932..3878888) Rhodopseudomonas palustris DX-1 10065849 YP_004109922.1 CDS Rpdx1_3620 NC_014834.1 3879058 3879324 D KEGG: mpo:Mpop_5347 HicB family protein; hypothetical protein 3879058..3879324 Rhodopseudomonas palustris DX-1 10065850 YP_004109923.1 CDS Rpdx1_3621 NC_014834.1 3879321 3879413 R hypothetical protein complement(3879321..3879413) Rhodopseudomonas palustris DX-1 10065851 YP_004109924.1 CDS Rpdx1_3622 NC_014834.1 3879512 3880636 D KEGG: deh:cbdb_A1489 hypothetical protein; hypothetical protein 3879512..3880636 Rhodopseudomonas palustris DX-1 10065852 YP_004109925.1 CDS Rpdx1_3623 NC_014834.1 3880642 3882129 R KEGG: sth:STH1310 site-specific DNA-methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(3880642..3882129) Rhodopseudomonas palustris DX-1 10065853 YP_004109926.1 CDS Rpdx1_3624 NC_014834.1 3882126 3882545 R manually curated; TIGRFAM: DNA mismatch endonuclease Vsr; KEGG: pmb:A9601_04271 hypothetical protein; PFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease Vsr complement(3882126..3882545) Rhodopseudomonas palustris DX-1 10065854 YP_004109927.1 CDS Rpdx1_3625 NC_014834.1 3882946 3883317 R PFAM: Domain of unknown function DUF2019; KEGG: mes:Meso_2040 hypothetical protein; hypothetical protein complement(3882946..3883317) Rhodopseudomonas palustris DX-1 10065855 YP_004109928.1 CDS Rpdx1_3626 NC_014834.1 3883314 3884207 R KEGG: nwi:Nwi_1168 hypothetical protein; hypothetical protein complement(3883314..3884207) Rhodopseudomonas palustris DX-1 10065856 YP_004109929.1 CDS Rpdx1_3627 NC_014834.1 3884487 3885743 R TIGRFAM: phage major capsid protein, HK97 family; KEGG: oca:OCAR_6602 phage major capsid protein, HK97 family; phage major capsid protein, HK97 family complement(3884487..3885743) Rhodopseudomonas palustris DX-1 10065857 YP_004109930.1 CDS Rpdx1_3629 NC_014834.1 3886708 3886887 R KEGG: nha:Nham_1412 hypothetical protein; hypothetical protein complement(3886708..3886887) Rhodopseudomonas palustris DX-1 10065859 YP_004109931.1 CDS Rpdx1_3630 NC_014834.1 3886892 3887092 R KEGG: nha:Nham_1411 hypothetical protein; hypothetical protein complement(3886892..3887092) Rhodopseudomonas palustris DX-1 10065860 YP_004109932.1 CDS Rpdx1_3631 NC_014834.1 3887185 3887778 R KEGG: psl:Psta_3457 hypothetical protein; hypothetical protein complement(3887185..3887778) Rhodopseudomonas palustris DX-1 10065861 YP_004109933.1 CDS Rpdx1_3632 NC_014834.1 3887895 3889070 R KEGG: oca:OCAR_6609 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family complement(3887895..3889070) Rhodopseudomonas palustris DX-1 10065862 YP_004109934.1 CDS Rpdx1_3633 NC_014834.1 3889417 3889569 R KEGG: bra:BRADO2727 hypothetical protein; hypothetical protein complement(3889417..3889569) Rhodopseudomonas palustris DX-1 10065863 YP_004109935.1 CDS Rpdx1_3634 NC_014834.1 3890096 3890260 R PFAM: Flp/Fap pilin component; KEGG: nha:Nham_0394 Flp/Fap pilin component; Flp/Fap pilin component complement(3890096..3890260) Rhodopseudomonas palustris DX-1 10065864 YP_004109936.1 CDS Rpdx1_3635 NC_014834.1 3890366 3891763 R KEGG: nha:Nham_0909 hypothetical protein; hypothetical protein complement(3890366..3891763) Rhodopseudomonas palustris DX-1 10065865 YP_004109937.1 CDS Rpdx1_3636 NC_014834.1 3891892 3893481 R PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3058 major facilitator superfamily permease; major facilitator superfamily protein complement(3891892..3893481) Rhodopseudomonas palustris DX-1 10065866 YP_004109938.1 CDS Rpdx1_3637 NC_014834.1 3893692 3894759 D PFAM: Choloylglycine hydrolase; KEGG: gdj:Gdia_2282 choloylglycine hydrolase; choloylglycine hydrolase 3893692..3894759 Rhodopseudomonas palustris DX-1 10065867 YP_004109939.1 CDS Rpdx1_3638 NC_014834.1 3894891 3895640 R KEGG: tva:TVAG_124720 hypothetical protein; hypothetical protein complement(3894891..3895640) Rhodopseudomonas palustris DX-1 10065868 YP_004109940.1 CDS Rpdx1_3639 NC_014834.1 3895717 3896016 R KEGG: sme:SMc04432 hypothetical protein; hypothetical protein complement(3895717..3896016) Rhodopseudomonas palustris DX-1 10065869 YP_004109941.1 CDS Rpdx1_3640 NC_014834.1 3896009 3896260 R PFAM: protein of unknown function DUF497; KEGG: rsp:RSP_2763 hypothetical protein; hypothetical protein complement(3896009..3896260) Rhodopseudomonas palustris DX-1 10065870 YP_004109942.1 CDS Rpdx1_3641 NC_014834.1 3896393 3897565 D KEGG: bra:BRADO4091 putative beta-lactamase family protein; putative 6-aminohexanoate-dimer hydrolase; PFAM: beta-lactamase; 6-aminohexanoate-dimer hydrolase 3896393..3897565 Rhodopseudomonas palustris DX-1 10065871 YP_004109943.1 CDS Rpdx1_3642 NC_014834.1 3897883 3899175 R KEGG: mch:Mchl_5652 hypothetical protein; hypothetical protein complement(3897883..3899175) Rhodopseudomonas palustris DX-1 10065872 YP_004109944.1 CDS Rpdx1_3643 NC_014834.1 3899202 3901238 R PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mch:Mchl_5651 peptidase S8 and S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin complement(3899202..3901238) Rhodopseudomonas palustris DX-1 10065873 YP_004109945.1 CDS Rpdx1_3644 NC_014834.1 3901308 3902447 R PFAM: Patatin; KEGG: bra:BRADO1558 alpha-beta hydrolase family esterase; patatin complement(3901308..3902447) Rhodopseudomonas palustris DX-1 10065874 YP_004109946.1 CDS Rpdx1_3645 NC_014834.1 3903093 3905405 D KEGG: rru:Rru_A2395 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 3903093..3905405 Rhodopseudomonas palustris DX-1 10065875 YP_004109947.1 CDS Rpdx1_3646 NC_014834.1 3905402 3906547 D KEGG: bbt:BBta_2666 putative uncharacterized iron-regulated membrane protein; putative iron-regulated membrane protein 3905402..3906547 Rhodopseudomonas palustris DX-1 10065876 YP_004109948.1 CDS Rpdx1_3647 NC_014834.1 3906544 3906750 D KEGG: pfs:PFLU5631 hypothetical protein; hypothetical protein 3906544..3906750 Rhodopseudomonas palustris DX-1 10065877 YP_004109949.1 CDS Rpdx1_3648 NC_014834.1 3907028 3907981 R PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein; Integrase catalytic subunit complement(3907028..3907981) Rhodopseudomonas palustris DX-1 10065878 YP_004109950.1 CDS Rpdx1_3650 NC_014834.1 3908277 3909491 R PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr1050 branched chain amino acid transport system substrate binding protein; extracellular ligand-binding receptor complement(3908277..3909491) Rhodopseudomonas palustris DX-1 10065880 YP_004109951.1 CDS Rpdx1_3651 NC_014834.1 3909567 3909887 R PFAM: ferredoxin; KEGG: bja:blr1049 ferrodoxin; ferredoxin complement(3909567..3909887) Rhodopseudomonas palustris DX-1 10065881 YP_004109952.1 CDS Rpdx1_3652 NC_014834.1 3909897 3911135 R PFAM: cytochrome P450; KEGG: bbt:BBta_0729 putative cytochrome P450; cytochrome P450 complement(3909897..3911135) Rhodopseudomonas palustris DX-1 10065882 YP_004109953.1 CDS Rpdx1_3653 NC_014834.1 3911215 3911730 D KEGG: bja:bll1047 transcriptional regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 3911215..3911730 Rhodopseudomonas palustris DX-1 10065883 YP_004109954.1 CDS Rpdx1_3654 NC_014834.1 3912024 3912767 R PFAM: protein of unknown function DUF81; KEGG: bch:Bcen2424_3236 hypothetical protein; hypothetical protein complement(3912024..3912767) Rhodopseudomonas palustris DX-1 10065884 YP_004109955.1 CDS Rpdx1_3655 NC_014834.1 3912821 3913333 R PFAM: protein of unknown function UPF0153; KEGG: bja:blr3103 hypothetical protein; hypothetical protein complement(3912821..3913333) Rhodopseudomonas palustris DX-1 10065885 YP_004109956.1 CDS Rpdx1_3656 NC_014834.1 3913602 3915884 D TIGRFAM: penicillin-binding protein, 1A family; KEGG: bra:BRADO2718 putative penicillin-binding protein (MrcA-like); PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 3913602..3915884 Rhodopseudomonas palustris DX-1 10065886 YP_004109957.1 CDS Rpdx1_3657 NC_014834.1 3915928 3916506 D PFAM: protein of unknown function DUF1214; KEGG: bra:BRADO2717 putative signal peptide; hypothetical protein 3915928..3916506 Rhodopseudomonas palustris DX-1 10065887 YP_004109958.1 CDS Rpdx1_3658 NC_014834.1 3916503 3917069 D KEGG: bja:bll3100 hypothetical protein; hypothetical protein 3916503..3917069 Rhodopseudomonas palustris DX-1 10065888 YP_004109959.1 CDS Rpdx1_3659 NC_014834.1 3917096 3917878 R KEGG: nwi:Nwi_1147 hypothetical protein; hypothetical protein complement(3917096..3917878) Rhodopseudomonas palustris DX-1 10065889 YP_004109960.1 CDS Rpdx1_3660 NC_014834.1 3917896 3918096 R KEGG: oca:OCAR_6625 hypothetical protein; hypothetical protein complement(3917896..3918096) Rhodopseudomonas palustris DX-1 10065890 YP_004109961.1 CDS Rpdx1_3661 NC_014834.1 3918187 3918801 D KEGG: bja:blr5578 hypothetical protein; hypothetical protein 3918187..3918801 Rhodopseudomonas palustris DX-1 10065891 YP_004109962.1 CDS Rpdx1_3662 NC_014834.1 3918880 3919950 D PFAM: polysaccharide deacetylase; KEGG: nha:Nham_1255 polysaccharide deacetylase; polysaccharide deacetylase 3918880..3919950 Rhodopseudomonas palustris DX-1 10065892 YP_004109963.1 CDS Rpdx1_3663 NC_014834.1 3920103 3921077 D KEGG: nha:Nham_1399 hypothetical protein; hypothetical protein 3920103..3921077 Rhodopseudomonas palustris DX-1 10065893 YP_004109964.1 CDS Rpdx1_3664 NC_014834.1 3921309 3921650 R PFAM: protein of unknown function DUF1491; KEGG: bbt:BBta_3047 hypothetical protein; hypothetical protein complement(3921309..3921650) Rhodopseudomonas palustris DX-1 10065894 YP_004109965.1 CDS Rpdx1_3665 NC_014834.1 3921793 3922524 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bra:BRADO2709 hypothetical protein; peptidoglycan-binding domain 1 protein complement(3921793..3922524) Rhodopseudomonas palustris DX-1 10065895 YP_004109966.1 CDS Rpdx1_3666 NC_014834.1 3922601 3924424 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: bra:BRADO2708 sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(3922601..3924424) Rhodopseudomonas palustris DX-1 10065896 YP_004109967.1 CDS Rpdx1_3667 NC_014834.1 3924830 3925252 D KEGG: bra:BRADO2707 hypothetical protein; hypothetical protein 3924830..3925252 Rhodopseudomonas palustris DX-1 10065897 YP_004109968.1 CDS Rpdx1_3668 NC_014834.1 3925368 3925796 D PFAM: Fe-S metabolism associated SufE; KEGG: bbt:BBta_3043 putative SufE-like protein; Fe-S metabolism associated SufE 3925368..3925796 Rhodopseudomonas palustris DX-1 10065898 YP_004109969.1 CDS Rpdx1_3669 NC_014834.1 3925828 3926442 R KEGG: nwi:Nwi_2226 DNA replication initiation ATPase; DNA replication initiation ATPase complement(3925828..3926442) Rhodopseudomonas palustris DX-1 10065899 YP_004109970.1 CDS Rpdx1_3670 NC_014834.1 3926563 3927198 R PFAM: regulatory protein TetR; KEGG: rlg:Rleg_0120 transcriptional regulator, TetR family; regulatory protein TetR complement(3926563..3927198) Rhodopseudomonas palustris DX-1 10065900 YP_004109971.1 CDS Rpdx1_3671 NC_014834.1 3927280 3928020 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mdi:METDI4223 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3927280..3928020 Rhodopseudomonas palustris DX-1 10065901 YP_004109972.1 CDS Rpdx1_3672 NC_014834.1 3928028 3928444 R PFAM: ROSMUCR transcriptional regulator; KEGG: nha:Nham_2627 MucR family transcriptional regulator; MucR family transcriptional regulator complement(3928028..3928444) Rhodopseudomonas palustris DX-1 10065902 YP_004109973.1 CDS Rpdx1_3673 NC_014834.1 3928644 3929606 R KEGG: bja:blr3067 hypothetical protein; hypothetical protein complement(3928644..3929606) Rhodopseudomonas palustris DX-1 10065903 YP_004109974.1 CDS Rpdx1_3674 NC_014834.1 3929841 3930623 D PFAM: class II aldolase/adducin family protein; KEGG: bra:BRADO2701 aldolase II superfamily protein; class II aldolase/adducin family protein 3929841..3930623 Rhodopseudomonas palustris DX-1 10065904 YP_004109975.1 CDS Rpdx1_3675 NC_014834.1 3931083 3932084 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sme:SM_b20636 putative transposase of insertion sequence ISRm19 protein; transposase IS116/IS110/IS902 family protein complement(3931083..3932084) Rhodopseudomonas palustris DX-1 10065905 YP_004109976.1 CDS Rpdx1_3676 NC_014834.1 3932396 3932689 R KEGG: oca:OCAR_4725 hypothetical protein; hypothetical protein complement(3932396..3932689) Rhodopseudomonas palustris DX-1 10065906 YP_004109977.1 CDS Rpdx1_3677 NC_014834.1 3932686 3934305 R KEGG: oca:OCAR_4724 PepSY-associated TM helix; PepSY-associated TM helix family protein complement(3932686..3934305) Rhodopseudomonas palustris DX-1 10065907 YP_004109978.1 CDS Rpdx1_3678 NC_014834.1 3934334 3934615 R KEGG: oca:OCAR_4723 hypothetical protein; hypothetical protein complement(3934334..3934615) Rhodopseudomonas palustris DX-1 10065908 YP_004109979.1 CDS Rpdx1_3679 NC_014834.1 3934612 3935346 R KEGG: oca:OCAR_4722 hypothetical protein; hypothetical protein complement(3934612..3935346) Rhodopseudomonas palustris DX-1 10065909 YP_004109980.1 CDS Rpdx1_3680 NC_014834.1 3935421 3937739 R KEGG: oca:OCAR_4721 ferrichrome receptor FcuA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor complement(3935421..3937739) Rhodopseudomonas palustris DX-1 10065910 YP_004109981.1 CDS Rpdx1_3681 NC_014834.1 3938076 3939482 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: nha:Nham_2629 hypothetical protein; peptidase M20 complement(3938076..3939482) Rhodopseudomonas palustris DX-1 10065911 YP_004109982.1 CDS Rpdx1_3682 NC_014834.1 3939685 3941295 R PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: bra:BRADO2688 putative ATPase; hypothetical protein complement(3939685..3941295) Rhodopseudomonas palustris DX-1 10065912 YP_004109983.1 CDS Rpdx1_3683 NC_014834.1 3941632 3942003 D KEGG: bja:bll3061 hypothetical protein; hypothetical protein 3941632..3942003 Rhodopseudomonas palustris DX-1 10065913 YP_004109984.1 CDS Rpdx1_3684 NC_014834.1 3942022 3942429 D KEGG: nwi:Nwi_2232 hypothetical protein; hypothetical protein 3942022..3942429 Rhodopseudomonas palustris DX-1 10065914 YP_004109985.1 CDS Rpdx1_3685 NC_014834.1 3942495 3943352 D TIGRFAM: dihydropteroate synthase; KEGG: nha:Nham_2633 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 3942495..3943352 Rhodopseudomonas palustris DX-1 10065915 YP_004109986.1 CDS Rpdx1_3686 NC_014834.1 3943349 3943714 D KEGG: oca:OCAR_6643 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 3943349..3943714 Rhodopseudomonas palustris DX-1 10065916 YP_004109987.1 CDS Rpdx1_3687 NC_014834.1 3943716 3944207 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: nha:Nham_2635 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3943716..3944207 Rhodopseudomonas palustris DX-1 10065917 YP_004109988.1 CDS Rpdx1_3688 NC_014834.1 3944366 3946237 D KEGG: bja:bll3056 methylmalonyl-CoA mutase small subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase 3944366..3946237 Rhodopseudomonas palustris DX-1 10065918 YP_004109989.1 CDS Rpdx1_3689 NC_014834.1 3946234 3946698 D PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bra:BRADO2681 putative glutathione-dependent formaldehyde-activating (GFA); glutathione-dependent formaldehyde-activating protein 3946234..3946698 Rhodopseudomonas palustris DX-1 10065919 YP_004109990.1 CDS Rpdx1_3690 NC_014834.1 3946761 3948920 D TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: bbt:BBta_3021 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 3946761..3948920 Rhodopseudomonas palustris DX-1 10065920 YP_004109991.1 CDS Rpdx1_3691 NC_014834.1 3948983 3949240 D TIGRFAM: prevent-host-death family protein; KEGG: gvi:gsl1680 hypothetical protein; prevent-host-death family protein 3948983..3949240 Rhodopseudomonas palustris DX-1 10065921 YP_004109992.1 CDS Rpdx1_3692 NC_014834.1 3949237 3949647 D PFAM: PilT protein domain protein; KEGG: gvi:gll1679 hypothetical protein; PilT domain-containing protein 3949237..3949647 Rhodopseudomonas palustris DX-1 10065922 YP_004109993.1 CDS Rpdx1_3693 NC_014834.1 3949683 3949997 D PFAM: DNA polymerase beta domain protein region; KEGG: bja:bsl3053 hypothetical protein; DNA polymerase beta domain-containing protein 3949683..3949997 Rhodopseudomonas palustris DX-1 10065923 YP_004109994.1 CDS Rpdx1_3694 NC_014834.1 3949999 3950343 D PFAM: protein of unknown function DUF86; KEGG: rce:RC1_2668 hypothetical protein; hypothetical protein 3949999..3950343 Rhodopseudomonas palustris DX-1 10065924 YP_004109995.1 CDS Rpdx1_3695 NC_014834.1 3950340 3951128 D KEGG: bja:bll3052 hypothetical protein; hypothetical protein 3950340..3951128 Rhodopseudomonas palustris DX-1 10065925 YP_004109996.1 CDS Rpdx1_3696 NC_014834.1 3951112 3952104 D KEGG: bbt:BBta_3019 arginine/ornithine transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; LAO/AO transporter ATPase 3951112..3952104 Rhodopseudomonas palustris DX-1 10065926 YP_004109997.1 CDS Rpdx1_3697 NC_014834.1 3952101 3952748 D PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: nwi:Nwi_2241 peptidase C15, pyroglutamyl peptidase I; peptidase C15 pyroglutamyl peptidase I 3952101..3952748 Rhodopseudomonas palustris DX-1 10065927 YP_004109998.1 CDS Rpdx1_3698 NC_014834.1 3952866 3954224 D KEGG: nha:Nham_2646 nitrous oxidase accessory protein; nitrous oxidase accessory protein 3952866..3954224 Rhodopseudomonas palustris DX-1 10065928 YP_004109999.1 CDS Rpdx1_3699 NC_014834.1 3954332 3956641 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azc:AZC_1341 TonB dependent receptor; TonB-dependent receptor complement(3954332..3956641) Rhodopseudomonas palustris DX-1 10065929 YP_004110000.1 CDS Rpdx1_3700 NC_014834.1 3956797 3957255 R KEGG: bbt:BBta_4535 hypothetical protein; hypothetical protein complement(3956797..3957255) Rhodopseudomonas palustris DX-1 10065930 YP_004110001.1 CDS Rpdx1_3701 NC_014834.1 3957471 3959537 R KEGG: bja:blr2506 putative chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(3957471..3959537) Rhodopseudomonas palustris DX-1 10065931 YP_004110002.1 CDS Rpdx1_3702 NC_014834.1 3959978 3960496 R TIGRFAM: hypothetical protein; KEGG: nwi:Nwi_2244 hypothetical protein; hypothetical protein complement(3959978..3960496) Rhodopseudomonas palustris DX-1 10065932 YP_004110003.1 CDS Rpdx1_3703 NC_014834.1 3961034 3961858 R KEGG: bbt:BBta_3012 hypothetical protein; hypothetical protein complement(3961034..3961858) Rhodopseudomonas palustris DX-1 10065933 YP_004110004.1 CDS Rpdx1_3704 NC_014834.1 3961855 3962424 R KEGG: bbt:BBta_3011 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3961855..3962424) Rhodopseudomonas palustris DX-1 10065934 YP_004110005.1 CDS Rpdx1_3705 NC_014834.1 3962871 3963950 D SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: bbt:BBta_3010 diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 3962871..3963950 Rhodopseudomonas palustris DX-1 10065935 YP_004110006.1 CDS Rpdx1_3706 NC_014834.1 3963987 3965099 D PFAM: Protein of unknown function DUF2336; KEGG: nha:Nham_2660 hypothetical protein; hypothetical protein 3963987..3965099 Rhodopseudomonas palustris DX-1 10065936 YP_004110007.1 CDS Rpdx1_3707 NC_014834.1 3965121 3967340 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE2140 TonB-dependent receptor protein; TonB-dependent receptor complement(3965121..3967340) Rhodopseudomonas palustris DX-1 10065937 YP_004110008.1 CDS Rpdx1_3708 NC_014834.1 3967353 3969578 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_2201 TonB-dependent receptor; TonB-dependent receptor complement(3967353..3969578) Rhodopseudomonas palustris DX-1 10065938 YP_004110009.1 CDS Rpdx1_3710 NC_014834.1 3970104 3970742 R PFAM: protein of unknown function DUF1109; KEGG: bbt:BBta_3008 hypothetical protein; hypothetical protein complement(3970104..3970742) Rhodopseudomonas palustris DX-1 10065940 YP_004110010.1 CDS Rpdx1_3711 NC_014834.1 3970747 3971292 R KEGG: bja:blr3038 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(3970747..3971292) Rhodopseudomonas palustris DX-1 10065941 YP_004110011.1 CDS Rpdx1_3712 NC_014834.1 3971545 3972228 D KEGG: bja:bll3037 hypothetical protein; hypothetical protein 3971545..3972228 Rhodopseudomonas palustris DX-1 10065942 YP_004110012.1 CDS Rpdx1_3713 NC_014834.1 3972314 3973093 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:bll3036 enoyl CoA hydratase; enoyl-CoA hydratase/isomerase 3972314..3973093 Rhodopseudomonas palustris DX-1 10065943 YP_004110013.1 CDS Rpdx1_3714 NC_014834.1 3973290 3974708 D KEGG: bbt:BBta_3004 putative outer TolC membrane protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion membrane fusion protein 3973290..3974708 Rhodopseudomonas palustris DX-1 10065944 YP_004110014.1 CDS Rpdx1_3715 NC_014834.1 3974987 3975301 R manually curated; KEGG: bbt:BBta_5457 hypothetical protein; hypothetical protein complement(3974987..3975301) Rhodopseudomonas palustris DX-1 10065945 YP_004110015.1 CDS Rpdx1_3716 NC_014834.1 3975500 3978622 R KEGG: bbt:BBta_2989 putative cation/heavy metal efflux system protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump complement(3975500..3978622) Rhodopseudomonas palustris DX-1 10065946 YP_004110016.1 CDS Rpdx1_3717 NC_014834.1 3978778 3980016 R KEGG: bja:blr3031 hypothetical protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3978778..3980016) Rhodopseudomonas palustris DX-1 10065947 YP_004110017.1 CDS Rpdx1_3718 NC_014834.1 3980233 3981630 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr3030 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F complement(3980233..3981630) Rhodopseudomonas palustris DX-1 10065948 YP_004110018.1 CDS Rpdx1_3719 NC_014834.1 3981912 3983276 R KEGG: bja:blr4803 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(3981912..3983276) Rhodopseudomonas palustris DX-1 10065949 YP_004110019.1 CDS Rpdx1_3720 NC_014834.1 3983273 3983947 R KEGG: bja:blr4802 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator complement(3983273..3983947) Rhodopseudomonas palustris DX-1 10065950 YP_004110020.1 CDS Rpdx1_3722 NC_014834.1 3984216 3985259 R PFAM: glycosyl transferase group 1; KEGG: bja:bll8163 glycosyl transferase; glycosyl transferase group 1 protein complement(3984216..3985259) Rhodopseudomonas palustris DX-1 10065952 YP_004110021.1 CDS Rpdx1_3723 NC_014834.1 3985259 3986371 R PFAM: metallophosphoesterase; KEGG: bja:bll8164 hypothetical protein; metallophosphoesterase complement(3985259..3986371) Rhodopseudomonas palustris DX-1 10065953 YP_004110022.1 CDS Rpdx1_3724 NC_014834.1 3986368 3987027 R PFAM: SNARE associated Golgi protein; KEGG: bja:bll8165 putative alkaline phosphatase protein; hypothetical protein complement(3986368..3987027) Rhodopseudomonas palustris DX-1 10065954 YP_004110023.1 CDS Rpdx1_3725 NC_014834.1 3987038 3987613 R PFAM: ribosomal RNA adenine methylase transferase; KEGG: bja:bll8166 phospholipid N-methyltransferase; ribosomal RNA adenine methylase transferase complement(3987038..3987613) Rhodopseudomonas palustris DX-1 10065955 YP_004110024.1 CDS Rpdx1_3726 NC_014834.1 3988395 3991937 R SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: bja:blr3026 error-prone DNA polymerase; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III subunit alpha complement(3988395..3991937) Rhodopseudomonas palustris DX-1 10065956 YP_004110025.1 CDS Rpdx1_3727 NC_014834.1 3992120 3993556 R manually curated; KEGG: nha:Nham_2667 hypothetical protein; hypothetical protein complement(3992120..3993556) Rhodopseudomonas palustris DX-1 10065957 YP_004110026.1 CDS Rpdx1_3728 NC_014834.1 3993609 3994394 R KEGG: bra:BRADO2645 hypothetical protein; hypothetical protein complement(3993609..3994394) Rhodopseudomonas palustris DX-1 10065958 YP_004110027.1 CDS Rpdx1_3729 NC_014834.1 3994563 3995801 D KEGG: nwi:Nwi_2258 elongator protein 3/MiaB/NifB; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 3994563..3995801 Rhodopseudomonas palustris DX-1 10065959 YP_004110028.1 CDS Rpdx1_3730 NC_014834.1 3996032 3997585 D KEGG: bbt:BBta_2983 putative uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-like protein 3996032..3997585 Rhodopseudomonas palustris DX-1 10065960 YP_004110029.1 CDS Rpdx1_3731 NC_014834.1 3997805 3999040 D PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7827 ABC transporter substrate-binding protein; extracellular ligand-binding receptor 3997805..3999040 Rhodopseudomonas palustris DX-1 10065961 YP_004110030.1 CDS Rpdx1_3732 NC_014834.1 3999124 4000077 D PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein; Integrase catalytic subunit 3999124..4000077 Rhodopseudomonas palustris DX-1 10065962 YP_004110031.1 CDS Rpdx1_3733 NC_014834.1 4000247 4001527 D KEGG: nha:Nham_0659 hydroxypyruvate reductase; PFAM: MOFRL domain protein; hydroxypyruvate reductase 4000247..4001527 Rhodopseudomonas palustris DX-1 10065963 YP_004110032.1 CDS Rpdx1_3734 NC_014834.1 4001781 4003355 R KEGG: bja:bll7624 adenylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase complement(4001781..4003355) Rhodopseudomonas palustris DX-1 10065964 YP_004110033.1 CDS Rpdx1_3735 NC_014834.1 4003702 4005432 D PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: bja:blr2614 hypothetical protein; sodium/hydrogen exchanger 4003702..4005432 Rhodopseudomonas palustris DX-1 10065965 YP_004110034.1 CDS Rpdx1_3736 NC_014834.1 4005563 4006606 D KEGG: bja:blr4053 hypothetical protein; hypothetical protein 4005563..4006606 Rhodopseudomonas palustris DX-1 10065966 YP_004110035.1 CDS Rpdx1_3737 NC_014834.1 4006621 4007022 D KEGG: bvi:Bcep1808_0573 hypothetical protein; hypothetical protein 4006621..4007022 Rhodopseudomonas palustris DX-1 10065967 YP_004110036.1 CDS Rpdx1_3738 NC_014834.1 4007047 4007565 R KEGG: bbt:BBta_7084 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator complement(4007047..4007565) Rhodopseudomonas palustris DX-1 10065968 YP_004110037.1 CDS Rpdx1_3739 NC_014834.1 4007733 4008773 D PFAM: inner-membrane translocator; KEGG: bja:blr7832 ABC transporter permease protein; inner-membrane translocator 4007733..4008773 Rhodopseudomonas palustris DX-1 10065969 YP_004110038.1 CDS Rpdx1_3740 NC_014834.1 4008779 4010548 D KEGG: bbt:BBta_7086 ABC tranpsorter, permease protein / ATP-binding protein; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; ABC transporter-like protein 4008779..4010548 Rhodopseudomonas palustris DX-1 10065970 YP_004110039.1 CDS Rpdx1_3741 NC_014834.1 4010545 4011264 D KEGG: bja:blr7834 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4010545..4011264 Rhodopseudomonas palustris DX-1 10065971 YP_004110040.1 CDS Rpdx1_3742 NC_014834.1 4011202 4012056 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dma:DMR_43780 GGDEF domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(4011202..4012056) Rhodopseudomonas palustris DX-1 10065972 YP_004110041.1 CDS Rpdx1_3743 NC_014834.1 4012369 4013526 R PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7848 substrate-binding protein; extracellular ligand-binding receptor complement(4012369..4013526) Rhodopseudomonas palustris DX-1 10065973 YP_004110042.1 CDS Rpdx1_3744 NC_014834.1 4013606 4014025 R PFAM: thioesterase superfamily protein; KEGG: bbt:BBta_7090 putative 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein complement(4013606..4014025) Rhodopseudomonas palustris DX-1 10065974 YP_004110043.1 CDS Rpdx1_3745 NC_014834.1 4014163 4016058 R PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO0963 feruloyl-CoA synthase; AMP-dependent synthetase and ligase complement(4014163..4016058) Rhodopseudomonas palustris DX-1 10065975 YP_004110044.1 CDS Rpdx1_3746 NC_014834.1 4016070 4016876 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_7093 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(4016070..4016876) Rhodopseudomonas palustris DX-1 10065976 YP_004110045.1 CDS Rpdx1_3747 NC_014834.1 4017170 4017631 R KEGG: bja:blr7842 hypothetical protein; hypothetical protein complement(4017170..4017631) Rhodopseudomonas palustris DX-1 10065977 YP_004110046.1 CDS Rpdx1_3748 NC_014834.1 4017753 4019060 R KEGG: bja:blr7841 hypothetical protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(4017753..4019060) Rhodopseudomonas palustris DX-1 10065978 YP_004110047.1 CDS Rpdx1_3749 NC_014834.1 4019068 4019640 R KEGG: bbt:BBta_7097 TrapT family, DctQ subunit C4-dicarboxylate transport; TRAP dicarboxylate transporter subunit DctQ complement(4019068..4019640) Rhodopseudomonas palustris DX-1 10065979 YP_004110048.1 CDS Rpdx1_3750 NC_014834.1 4019788 4020816 R PFAM: Extracellular solute-binding protein, family 7; KEGG: vap:Vapar_3913 TRAP dicarboxylate transporter-DctP subunit; family 7 extracellular solute-binding protein complement(4019788..4020816) Rhodopseudomonas palustris DX-1 10065980 YP_004110049.1 CDS Rpdx1_3751 NC_014834.1 4020988 4022160 D TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; KEGG: bja:bll7838 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding; 4-hydroxybenzoate 3-monooxygenase 4020988..4022160 Rhodopseudomonas palustris DX-1 10065981 YP_004110050.1 CDS Rpdx1_3752 NC_014834.1 4022417 4022866 D PFAM: thioesterase superfamily protein; KEGG: pla:Plav_2272 thioesterase superfamily protein; thioesterase superfamily protein 4022417..4022866 Rhodopseudomonas palustris DX-1 10065982 YP_004110051.1 CDS Rpdx1_3753 NC_014834.1 4023041 4023727 R KEGG: bja:blr2961 hypothetical protein; hypothetical protein complement(4023041..4023727) Rhodopseudomonas palustris DX-1 10065983 YP_004110052.1 CDS Rpdx1_3754 NC_014834.1 4023720 4025069 R PFAM: Amidase; KEGG: bja:blr2960 amidase; amidase complement(4023720..4025069) Rhodopseudomonas palustris DX-1 10065984 YP_004110053.1 CDS Rpdx1_3755 NC_014834.1 4025362 4025775 D PFAM: protein of unknown function DUF35; KEGG: bja:bll2959 hypothetical protein; hypothetical protein 4025362..4025775 Rhodopseudomonas palustris DX-1 10065985 YP_004110054.1 CDS Rpdx1_3756 NC_014834.1 4025781 4026920 D KEGG: bra:BRADO2584 hypothetical protein; hypothetical protein 4025781..4026920 Rhodopseudomonas palustris DX-1 10065986 YP_004110055.1 CDS Rpdx1_3757 NC_014834.1 4027212 4028126 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2583 putative short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4027212..4028126 Rhodopseudomonas palustris DX-1 10065987 YP_004110056.1 CDS Rpdx1_3758 NC_014834.1 4028378 4029718 R PFAM: OmpA/MotB domain protein; KEGG: ara:Arad_8433 OmpA/MotB domain protein; OmpA/MotB domain-containing protein complement(4028378..4029718) Rhodopseudomonas palustris DX-1 10065988 YP_004110057.1 CDS Rpdx1_3759 NC_014834.1 4030126 4030455 R PFAM: small multidrug resistance protein; KEGG: xau:Xaut_3102 small multidrug resistance protein; small multidrug resistance protein complement(4030126..4030455) Rhodopseudomonas palustris DX-1 10065989 YP_004110058.1 CDS Rpdx1_3760 NC_014834.1 4030570 4033380 R KEGG: bbt:BBta_2928 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region; phosphoenolpyruvate carboxylase complement(4030570..4033380) Rhodopseudomonas palustris DX-1 10065990 YP_004110059.1 CDS Rpdx1_3761 NC_014834.1 4033480 4034280 R KEGG: nha:Nham_4237 hypothetical protein; hypothetical protein complement(4033480..4034280) Rhodopseudomonas palustris DX-1 10065991 YP_004110060.1 CDS Rpdx1_3762 NC_014834.1 4034556 4035623 D PFAM: Uncharacterised protein family UPF0324; KEGG: bra:BRADO0268 hypothetical protein; hypothetical protein 4034556..4035623 Rhodopseudomonas palustris DX-1 10065992 YP_004110061.1 CDS Rpdx1_3763 NC_014834.1 4035620 4036510 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bid:Bind_2471 LysR family transcriptional regulator; LysR family transcriptional regulator 4035620..4036510 Rhodopseudomonas palustris DX-1 10065993 YP_004110062.1 CDS Rpdx1_3764 NC_014834.1 4036670 4039456 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bja:bll4276 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; multi-sensor hybrid histidine kinase 4036670..4039456 Rhodopseudomonas palustris DX-1 10065994 YP_004110063.1 CDS Rpdx1_3765 NC_014834.1 4039453 4040997 R PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr2951 acyl-CoA synthetase; AMP-dependent synthetase and ligase complement(4039453..4040997) Rhodopseudomonas palustris DX-1 10065995 YP_004110064.1 CDS Rpdx1_3766 NC_014834.1 4041145 4041957 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr2950 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(4041145..4041957) Rhodopseudomonas palustris DX-1 10065996 YP_004110065.1 CDS Rpdx1_3767 NC_014834.1 4042068 4042940 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2577 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 4042068..4042940 Rhodopseudomonas palustris DX-1 10065997 YP_004110066.1 CDS Rpdx1_3768 NC_014834.1 4043270 4044898 D PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO2576 acyl-CoA synthetase; AMP-dependent synthetase and ligase 4043270..4044898 Rhodopseudomonas palustris DX-1 10065998 YP_004110067.1 CDS Rpdx1_3769 NC_014834.1 4045174 4046448 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO2575 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(4045174..4046448) Rhodopseudomonas palustris DX-1 10065999 YP_004110068.1 CDS Rpdx1_3770 NC_014834.1 4046574 4047353 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO2574 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4046574..4047353 Rhodopseudomonas palustris DX-1 10066000 YP_004110069.1 CDS Rpdx1_3771 NC_014834.1 4047584 4047982 R KEGG: bra:BRADO2573 hypothetical protein; hypothetical protein complement(4047584..4047982) Rhodopseudomonas palustris DX-1 10066001 YP_004110070.1 CDS Rpdx1_3772 NC_014834.1 4048001 4048996 R PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO2572 hypothetical protein; aminoglycoside phosphotransferase complement(4048001..4048996) Rhodopseudomonas palustris DX-1 10066002 YP_004110071.1 CDS Rpdx1_3773 NC_014834.1 4049004 4049807 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO2571 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(4049004..4049807) Rhodopseudomonas palustris DX-1 10066003 YP_004110072.1 CDS Rpdx1_3774 NC_014834.1 4049976 4050755 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_2917 putative reductase; short-chain dehydrogenase/reductase SDR 4049976..4050755 Rhodopseudomonas palustris DX-1 10066004 YP_004110073.1 CDS Rpdx1_3775 NC_014834.1 4050796 4052307 D KEGG: bra:BRADO2565 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 4050796..4052307 Rhodopseudomonas palustris DX-1 10066005 YP_004110074.1 CDS Rpdx1_3776 NC_014834.1 4052313 4053089 R KEGG: bja:blr2929 hypothetical protein; PFAM: Xylose isomerase domain protein TIM barrel; hydroxypyruvate isomerase complement(4052313..4053089) Rhodopseudomonas palustris DX-1 10066006 YP_004110075.1 CDS Rpdx1_3777 NC_014834.1 4053152 4053406 R manually curated; KEGG: cyh:Cyan8802_3861 hypothetical protein; hypothetical protein complement(4053152..4053406) Rhodopseudomonas palustris DX-1 10066007 YP_004110076.1 CDS Rpdx1_3778 NC_014834.1 4053403 4053606 R manually curated; KEGG: afr:AFE_0072 hypothetical protein; hypothetical protein complement(4053403..4053606) Rhodopseudomonas palustris DX-1 10066008 YP_004110077.1 CDS Rpdx1_3779 NC_014834.1 4053643 4054347 R KEGG: bra:BRADO2543 high-affinity branched-chain amino acid transport protein (ABC transporter ATP-binding protein); PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4053643..4054347) Rhodopseudomonas palustris DX-1 10066009 YP_004110078.1 CDS Rpdx1_3780 NC_014834.1 4054331 4055065 R KEGG: bja:blr2925 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4054331..4055065) Rhodopseudomonas palustris DX-1 10066010 YP_004110079.1 CDS Rpdx1_3781 NC_014834.1 4055062 4056048 R PFAM: inner-membrane translocator; KEGG: bbt:BBta_2886 putative ABC transporter permiase component; inner-membrane translocator complement(4055062..4056048) Rhodopseudomonas palustris DX-1 10066011 YP_004110080.1 CDS Rpdx1_3782 NC_014834.1 4056048 4056926 R PFAM: inner-membrane translocator; KEGG: bja:blr2923 amino acid ABC transporter permease protein; inner-membrane translocator complement(4056048..4056926) Rhodopseudomonas palustris DX-1 10066012 YP_004110081.1 CDS Rpdx1_3783 NC_014834.1 4057101 4058348 R PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO2539 putative branched-chain amino acid ABC transporter (substrate-binding protein); extracellular ligand-binding receptor complement(4057101..4058348) Rhodopseudomonas palustris DX-1 10066013 YP_004110082.1 CDS Rpdx1_3784 NC_014834.1 4058406 4059224 R PFAM: protein of unknown function DUF1445; KEGG: bra:BRADO2538 hypothetical protein; hypothetical protein complement(4058406..4059224) Rhodopseudomonas palustris DX-1 10066014 YP_004110083.1 CDS Rpdx1_3785 NC_014834.1 4059340 4060290 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:bll2920 transcriptional regulatory protein; LysR family transcriptional regulator 4059340..4060290 Rhodopseudomonas palustris DX-1 10066015 YP_004110084.1 CDS Rpdx1_3786 NC_014834.1 4060363 4061613 D TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bja:bll2919 allantoate amidohydrolase; PFAM: peptidase M20; amidase 4060363..4061613 Rhodopseudomonas palustris DX-1 10066016 YP_004110085.1 CDS Rpdx1_3787 NC_014834.1 4061654 4062568 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bbt:BBta_2880 putative phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 4061654..4062568 Rhodopseudomonas palustris DX-1 10066017 YP_004110086.1 CDS Rpdx1_3788 NC_014834.1 4062712 4063542 D KEGG: bur:Bcep18194_A5663 DNA translocase FtsK; hypothetical protein 4062712..4063542 Rhodopseudomonas palustris DX-1 10066018 YP_004110087.1 CDS Rpdx1_3789 NC_014834.1 4063575 4064654 R TIGRFAM: tartrate dehydrogenase; KEGG: bja:blr2916 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase complement(4063575..4064654) Rhodopseudomonas palustris DX-1 10066019 YP_004110088.1 CDS Rpdx1_3790 NC_014834.1 4064847 4066097 D PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_4762 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4064847..4066097 Rhodopseudomonas palustris DX-1 10066020 YP_004110089.1 CDS Rpdx1_3791 NC_014834.1 4066260 4067039 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_2878 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4066260..4067039 Rhodopseudomonas palustris DX-1 10066021 YP_004110090.1 CDS Rpdx1_3792 NC_014834.1 4067234 4068610 D TIGRFAM: beta-galactosidase; KEGG: bja:blr4657 beta-glucosidase; PFAM: glycoside hydrolase family 1; beta-galactosidase 4067234..4068610 Rhodopseudomonas palustris DX-1 10066022 YP_004110091.1 CDS Rpdx1_3793 NC_014834.1 4068626 4069738 R PFAM: ABC transporter domain protein; KEGG: bra:BRADO1574 putative ABC transporter-like; ABC transporter domain-containing protein complement(4068626..4069738) Rhodopseudomonas palustris DX-1 10066023 YP_004110092.1 CDS Rpdx1_3794 NC_014834.1 4069877 4071310 D PFAM: Amidase; KEGG: bra:BRADO2532 putative amidotransferase; amidase 4069877..4071310 Rhodopseudomonas palustris DX-1 10066024 YP_004110093.1 CDS Rpdx1_3795 NC_014834.1 4071458 4072681 D PFAM: OsmC family protein; KEGG: bja:bll2902 hypothetical protein; OsmC family protein 4071458..4072681 Rhodopseudomonas palustris DX-1 10066025 YP_004110094.1 CDS Rpdx1_3796 NC_014834.1 4072733 4073695 D PFAM: fatty acid desaturase; KEGG: ccs:CCNA_03535 fatty acid desaturase; fatty acid desaturase 4072733..4073695 Rhodopseudomonas palustris DX-1 10066026 YP_004110095.1 CDS Rpdx1_3797 NC_014834.1 4074147 4074884 R KEGG: cyn:Cyan7425_4713 hypothetical protein; hypothetical protein complement(4074147..4074884) Rhodopseudomonas palustris DX-1 10066027 YP_004110096.1 CDS Rpdx1_3798 NC_014834.1 4075114 4077153 R KEGG: xau:Xaut_0907 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase; MaoC domain protein dehydratase; phenylacetic acid degradation protein paaN complement(4075114..4077153) Rhodopseudomonas palustris DX-1 10066028 YP_004110097.1 CDS Rpdx1_3799 NC_014834.1 4077304 4078089 D KEGG: mno:Mnod_3363 phenylacetate degradation, enoyl-CoA hydratase PaaB; TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase; phenylacetate degradation, enoyl-CoA hydratase paaB 4077304..4078089 Rhodopseudomonas palustris DX-1 10066029 YP_004110098.1 CDS Rpdx1_3800 NC_014834.1 4078086 4078544 D KEGG: bra:BRADO2525 phenylacetic acid degradation protein; TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; phenylacetic acid degradation protein PaaD 4078086..4078544 Rhodopseudomonas palustris DX-1 10066030 YP_004110099.1 CDS Rpdx1_3801 NC_014834.1 4078559 4079890 D TIGRFAM: phenylacetate-CoA ligase; KEGG: bja:blr2897 phenylacetate-coenzyme A ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate-CoA ligase 4078559..4079890 Rhodopseudomonas palustris DX-1 10066031 YP_004110100.1 CDS Rpdx1_3802 NC_014834.1 4079897 4080547 R PFAM: 2OG-Fe(II) oxygenase; KEGG: bbt:BBta_2936 DNA-N1-methyladenine dioxygenase; 2OG-Fe(II) oxygenase complement(4079897..4080547) Rhodopseudomonas palustris DX-1 10066032 YP_004110101.1 CDS Rpdx1_3803 NC_014834.1 4080547 4081464 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:blr7836 transcriptional regulatory protein; LysR family transcriptional regulator complement(4080547..4081464) Rhodopseudomonas palustris DX-1 10066033 YP_004110102.1 CDS Rpdx1_3804 NC_014834.1 4081567 4082646 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: dar:Daro_1523 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4081567..4082646 Rhodopseudomonas palustris DX-1 10066034 YP_004110103.1 CDS Rpdx1_3805 NC_014834.1 4082592 4082999 R KEGG: nha:Nham_0655 hypothetical protein; hypothetical protein complement(4082592..4082999) Rhodopseudomonas palustris DX-1 10066035 YP_004110104.1 CDS Rpdx1_3806 NC_014834.1 4083240 4083626 D KEGG: sil:SPO0412 hypothetical protein; hypothetical protein 4083240..4083626 Rhodopseudomonas palustris DX-1 10066036 YP_004110105.1 CDS Rpdx1_3807 NC_014834.1 4083829 4086054 R SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: msl:Msil_0486 diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase complement(4083829..4086054) Rhodopseudomonas palustris DX-1 10066037 YP_004110106.1 CDS Rpdx1_3808 NC_014834.1 4086346 4086750 R KEGG: nha:Nham_0654 hypothetical protein; hypothetical protein complement(4086346..4086750) Rhodopseudomonas palustris DX-1 10066038 YP_004110107.1 CDS Rpdx1_3809 NC_014834.1 4087004 4087888 R KEGG: nha:Nham_0653 hypothetical protein; hypothetical protein complement(4087004..4087888) Rhodopseudomonas palustris DX-1 10066039 YP_004110108.1 CDS Rpdx1_3810 NC_014834.1 4087898 4088572 R KEGG: bbt:BBta_7109 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; cyclic nucleotide-binding protein complement(4087898..4088572) Rhodopseudomonas palustris DX-1 10066040 YP_004110109.1 CDS Rpdx1_3811 NC_014834.1 4088876 4089658 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr7857 putative 3-hydroxybutyryl-CoA dehydratase; enoyl-CoA hydratase/isomerase 4088876..4089658 Rhodopseudomonas palustris DX-1 10066041 YP_004110110.1 CDS Rpdx1_3812 NC_014834.1 4089959 4090942 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: met:M446_5547 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 4089959..4090942 Rhodopseudomonas palustris DX-1 10066042 YP_004110111.1 CDS Rpdx1_3813 NC_014834.1 4090978 4091676 R PFAM: nitroreductase; KEGG: bbt:BBta_7115 hypothetical protein; nitroreductase complement(4090978..4091676) Rhodopseudomonas palustris DX-1 10066043 YP_004110112.1 CDS Rpdx1_3814 NC_014834.1 4091839 4093083 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO0936 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(4091839..4093083) Rhodopseudomonas palustris DX-1 10066044 YP_004110113.1 CDS Rpdx1_3815 NC_014834.1 4093231 4094478 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll7800 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(4093231..4094478) Rhodopseudomonas palustris DX-1 10066045 YP_004110114.1 CDS Rpdx1_3816 NC_014834.1 4094615 4095742 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll7801 putative dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(4094615..4095742) Rhodopseudomonas palustris DX-1 10066046 YP_004110115.1 CDS Rpdx1_3817 NC_014834.1 4095889 4097763 R PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_7119 acyl-CoA synthetase; AMP-dependent synthetase and ligase complement(4095889..4097763) Rhodopseudomonas palustris DX-1 10066047 YP_004110116.1 CDS Rpdx1_3818 NC_014834.1 4097814 4098620 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO0932 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase complement(4097814..4098620) Rhodopseudomonas palustris DX-1 10066048 YP_004110117.1 CDS Rpdx1_3819 NC_014834.1 4098843 4099601 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll7804 3-hydroxyacyl-CoA dehydrogenase type II; short-chain dehydrogenase/reductase SDR complement(4098843..4099601) Rhodopseudomonas palustris DX-1 10066049 YP_004110118.1 CDS Rpdx1_3820 NC_014834.1 4100063 4100746 R PFAM: regulatory protein TetR; KEGG: bja:bll7805 transcriptional regulatory protein; regulatory protein TetR complement(4100063..4100746) Rhodopseudomonas palustris DX-1 10066050 YP_004110119.1 CDS Rpdx1_3821 NC_014834.1 4100871 4102046 D TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bra:BRADO0929 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 4100871..4102046 Rhodopseudomonas palustris DX-1 10066051 YP_004110120.1 CDS Rpdx1_3822 NC_014834.1 4102234 4103790 D PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr7807 acyl-CoA synthetase; AMP-dependent synthetase and ligase 4102234..4103790 Rhodopseudomonas palustris DX-1 10066052 YP_004110121.1 CDS Rpdx1_3823 NC_014834.1 4103901 4104761 D KEGG: bja:bll5248 hypothetical protein; hypothetical protein 4103901..4104761 Rhodopseudomonas palustris DX-1 10066053 YP_004110122.1 CDS Rpdx1_3824 NC_014834.1 4105216 4106688 D PFAM: Amidase; KEGG: bra:BRADO0922 amidase; amidase 4105216..4106688 Rhodopseudomonas palustris DX-1 10066054 YP_004110123.1 CDS Rpdx1_3825 NC_014834.1 4106821 4108608 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll7899 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(4106821..4108608) Rhodopseudomonas palustris DX-1 10066055 YP_004110124.1 CDS Rpdx1_3826 NC_014834.1 4108752 4109495 D PFAM: protein of unknown function DUF81; KEGG: bja:blr6618 hypothetical protein; hypothetical protein 4108752..4109495 Rhodopseudomonas palustris DX-1 10066056 YP_004110125.1 CDS Rpdx1_3827 NC_014834.1 4109549 4109755 R manually curated; KEGG: bra:BRADO0916 hypothetical protein; hypothetical protein complement(4109549..4109755) Rhodopseudomonas palustris DX-1 10066057 YP_004110126.1 CDS Rpdx1_3828 NC_014834.1 4110003 4110494 D PFAM: CinA domain protein; KEGG: bja:blr7909 hypothetical protein; CinA domain-containing protein 4110003..4110494 Rhodopseudomonas palustris DX-1 10066058 YP_004110127.1 CDS Rpdx1_3829 NC_014834.1 4110590 4111186 R PFAM: Manganese/iron superoxide dismutase-like; KEGG: bra:BRADO6273 superoxide dismutase, iron/manganese cofactor; manganese/iron superoxide dismutase-like protein complement(4110590..4111186) Rhodopseudomonas palustris DX-1 10066059 YP_004110128.1 CDS Rpdx1_3830 NC_014834.1 4111387 4112622 R PFAM: major facilitator superfamily MFS_1; KEGG: cti:RALTA_A1589 putative transporter, major facilitator superfamily MFS_1; major facilitator superfamily protein complement(4111387..4112622) Rhodopseudomonas palustris DX-1 10066060 YP_004110129.1 CDS Rpdx1_3831 NC_014834.1 4112895 4114268 D KEGG: bja:blr7776 cation efflux system protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 4112895..4114268 Rhodopseudomonas palustris DX-1 10066061 YP_004110130.1 CDS Rpdx1_3832 NC_014834.1 4114400 4114843 D PFAM: Protein of unknown function DUF2147; KEGG: nwi:Nwi_0912 hypothetical protein; hypothetical protein 4114400..4114843 Rhodopseudomonas palustris DX-1 10066062 YP_004110131.1 CDS Rpdx1_3834 NC_014834.1 4116075 4116209 R hypothetical protein complement(4116075..4116209) Rhodopseudomonas palustris DX-1 10066064 YP_004110132.1 CDS Rpdx1_3836 NC_014834.1 4117224 4118657 D PFAM: Aldehyde Dehydrogenase; KEGG: bja:blr7884 coniferyl aldehyde dehydrogenase; aldehyde dehydrogenase 4117224..4118657 Rhodopseudomonas palustris DX-1 10066067 YP_004110133.1 CDS Rpdx1_3837 NC_014834.1 4118785 4120389 D KEGG: bra:BRADO6420 glucose-methanol-choline oxidoreductase family protein; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; choline dehydrogenase 4118785..4120389 Rhodopseudomonas palustris DX-1 10066068 YP_004110134.1 CDS Rpdx1_3838 NC_014834.1 4120712 4121473 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO6422 putative short-chain dehydrogenase/reductase protein; putative 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase); short-chain dehydrogenase/reductase SDR complement(4120712..4121473) Rhodopseudomonas palustris DX-1 10066069 YP_004110135.1 CDS Rpdx1_3839 NC_014834.1 4121582 4122364 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_1210 putative 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 4121582..4122364 Rhodopseudomonas palustris DX-1 10066070 YP_004110136.1 CDS Rpdx1_3840 NC_014834.1 4122419 4123045 R KEGG: bra:BRADO6997 two-component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family two component transcriptional regulator complement(4122419..4123045) Rhodopseudomonas palustris DX-1 10066071 YP_004110137.1 CDS Rpdx1_3843 NC_014834.1 4127571 4128074 R KEGG: bbt:BBta_0529 putative response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(4127571..4128074) Rhodopseudomonas palustris DX-1 10066074 YP_004110138.1 CDS Rpdx1_3844 NC_014834.1 4128249 4130603 R KEGG: pna:Pnap_4497 putative phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; phosphoketolase complement(4128249..4130603) Rhodopseudomonas palustris DX-1 10066075 YP_004110139.1 CDS Rpdx1_3845 NC_014834.1 4130996 4131646 D PFAM: transport-associated; KEGG: nha:Nham_1909 transport-associated; transport-associated protein 4130996..4131646 Rhodopseudomonas palustris DX-1 10066076 YP_004110140.1 CDS Rpdx1_3846 NC_014834.1 4131692 4133131 R KEGG: bbt:BBta_5336 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; UspA domain protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase complement(4131692..4133131) Rhodopseudomonas palustris DX-1 10066077 YP_004110141.1 CDS Rpdx1_3847 NC_014834.1 4133135 4133875 R PFAM: metallophosphoesterase; KEGG: bja:bll5683 serine/threonine phosphatase; metallophosphoesterase complement(4133135..4133875) Rhodopseudomonas palustris DX-1 10066078 YP_004110142.1 CDS Rpdx1_3848 NC_014834.1 4134097 4134525 D KEGG: bja:blr0497 hypothetical protein; hypothetical protein 4134097..4134525 Rhodopseudomonas palustris DX-1 10066079 YP_004110143.1 CDS Rpdx1_3849 NC_014834.1 4134683 4136380 D TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; KEGG: bchE; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; SMART: Elongator protein 3/MiaB/NifB; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 4134683..4136380 Rhodopseudomonas palustris DX-1 10066080 YP_004110144.1 CDS Rpdx1_3850 NC_014834.1 4136352 4137062 D KEGG: bra:BRADO1653 4-vinyl protochlorophyllide reductase; TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR; bacteriochlorophyll 4-vinyl reductase 4136352..4137062 Rhodopseudomonas palustris DX-1 10066081 YP_004110145.1 CDS Rpdx1_3851 NC_014834.1 4137091 4138440 D TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: jan:Jann_3244 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 4137091..4138440 Rhodopseudomonas palustris DX-1 10066082 YP_004110146.1 CDS Rpdx1_3852 NC_014834.1 4138692 4138994 D KEGG: pth:PTH_1299 ATP-dependent Zn proteases; ATP-dependent Zn protease 4138692..4138994 Rhodopseudomonas palustris DX-1 10066083 YP_004110147.1 CDS Rpdx1_3853 NC_014834.1 4139129 4139671 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bra:BRADO6298 glyoxalase/bleomycin resistance protein; glyoxalase/bleomycin resistance protein/dioxygenase 4139129..4139671 Rhodopseudomonas palustris DX-1 10066084 YP_004110148.1 CDS Rpdx1_3854 NC_014834.1 4139668 4140621 R PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein; Integrase catalytic subunit complement(4139668..4140621) Rhodopseudomonas palustris DX-1 10066085 YP_004110149.1 CDS Rpdx1_3855 NC_014834.1 4140988 4141650 D KEGG: nha:Nham_0414 hypothetical protein; hypothetical protein 4140988..4141650 Rhodopseudomonas palustris DX-1 10066086 YP_004110150.1 CDS Rpdx1_3856 NC_014834.1 4141671 4141946 R PFAM: protein of unknown function DUF156; KEGG: bbt:BBta_0207 hypothetical protein; hypothetical protein complement(4141671..4141946) Rhodopseudomonas palustris DX-1 10066087 YP_004110151.1 CDS Rpdx1_3857 NC_014834.1 4141998 4144892 D TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO0147 copper-transporting P-type ATPase; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 4141998..4144892 Rhodopseudomonas palustris DX-1 10066088 YP_004110152.1 CDS Rpdx1_3858 NC_014834.1 4145035 4145622 D PFAM: Hemerythrin HHE cation binding domain protein; KEGG: bbt:BBta_4024 hypothetical protein; hemerythrin HHE cation-binding domain-containing protein 4145035..4145622 Rhodopseudomonas palustris DX-1 10066089 YP_004110153.1 CDS Rpdx1_3859 NC_014834.1 4145703 4146065 R PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: azc:AZC_1071 hypothetical protein; hypothetical protein complement(4145703..4146065) Rhodopseudomonas palustris DX-1 10066090 YP_004110154.1 CDS Rpdx1_3860 NC_014834.1 4146285 4146500 R KEGG: bja:blr5311 histon H1; hypothetical protein complement(4146285..4146500) Rhodopseudomonas palustris DX-1 10066091 YP_004110155.1 CDS Rpdx1_3861 NC_014834.1 4146875 4148089 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nha:Nham_2861 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 4146875..4148089 Rhodopseudomonas palustris DX-1 10066092 YP_004110156.1 CDS Rpdx1_3862 NC_014834.1 4148127 4148822 R PFAM: high-affinity nickel-transporter; KEGG: sal:Sala_3212 high-affinity nickel-transporter; high-affinity nickel-transporter complement(4148127..4148822) Rhodopseudomonas palustris DX-1 10066093 YP_004110157.1 CDS Rpdx1_3863 NC_014834.1 4148926 4150134 D KEGG: bja:bll2304 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 4148926..4150134 Rhodopseudomonas palustris DX-1 10066094 YP_004110158.1 CDS Rpdx1_3864 NC_014834.1 4150338 4151351 D PFAM: aldo/keto reductase; KEGG: bbt:BBta_0931 putative oxidoreductase (aldo/keto reductase); aldo/keto reductase 4150338..4151351 Rhodopseudomonas palustris DX-1 10066095 YP_004110159.1 CDS Rpdx1_3865 NC_014834.1 4151486 4151884 D KEGG: bra:BRADO3674 hypothetical protein; hypothetical protein 4151486..4151884 Rhodopseudomonas palustris DX-1 10066096 YP_004110160.1 CDS Rpdx1_3866 NC_014834.1 4152159 4153376 D PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr4312 hypothetical protein; extracellular ligand-binding receptor 4152159..4153376 Rhodopseudomonas palustris DX-1 10066097 YP_004110161.1 CDS Rpdx1_3867 NC_014834.1 4153539 4153895 R PFAM: plasmid stabilization system; KEGG: rce:RC1_0081 plasmid stabilization system protein, RelE; plasmid stabilization system complement(4153539..4153895) Rhodopseudomonas palustris DX-1 10066098 YP_004110162.1 CDS Rpdx1_3868 NC_014834.1 4153901 4154188 R TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: rce:RC1_0082 transcriptional regulators (CopG/Arc/MetJ DNA-binding domain), putative; addiction module antidote protein complement(4153901..4154188) Rhodopseudomonas palustris DX-1 10066099 YP_004110163.1 CDS Rpdx1_3869 NC_014834.1 4154368 4155057 R KEGG: xau:Xaut_4228 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4154368..4155057) Rhodopseudomonas palustris DX-1 10066100 YP_004110164.1 CDS Rpdx1_3870 NC_014834.1 4155050 4156276 R PFAM: protein of unknown function DUF214; KEGG: bbt:BBta_1848 putative lipoprotein-releasing system transmembrane protein LolC; hypothetical protein complement(4155050..4156276) Rhodopseudomonas palustris DX-1 10066101 YP_004110165.1 CDS Rpdx1_3871 NC_014834.1 4156273 4157535 R KEGG: xau:Xaut_4226 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(4156273..4157535) Rhodopseudomonas palustris DX-1 10066102 YP_004110166.1 CDS Rpdx1_3872 NC_014834.1 4157592 4158689 D PFAM: alpha/beta hydrolase fold; KEGG: mno:Mnod_5961 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein 4157592..4158689 Rhodopseudomonas palustris DX-1 10066103 YP_004110167.1 CDS Rpdx1_3873 NC_014834.1 4158767 4159081 D KEGG: nha:Nham_2805 hypothetical protein; hypothetical protein 4158767..4159081 Rhodopseudomonas palustris DX-1 10066104 YP_004110168.1 CDS Rpdx1_3874 NC_014834.1 4159181 4159408 D KEGG: sus:Acid_3191 ribulose-5-phosphate 3-epimerase; hypothetical protein 4159181..4159408 Rhodopseudomonas palustris DX-1 10066105 YP_004110169.1 CDS Rpdx1_3875 NC_014834.1 4159398 4160135 D KEGG: abo:ABO_0204 hypothetical protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; transglutaminase domain-containing protein 4159398..4160135 Rhodopseudomonas palustris DX-1 10066106 YP_004110170.1 CDS Rpdx1_3876 NC_014834.1 4160167 4161687 R TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PFAM: GGDEF domain containing protein; Hemerythrin HHE cation binding domain protein; KEGG: nha:Nham_2322 diguanylate cyclase; SMART: GGDEF domain containing protein; hemerythrin-like metal-binding domain-containing diguanylate cyclase complement(4160167..4161687) Rhodopseudomonas palustris DX-1 10066107 YP_004110171.1 CDS Rpdx1_3877 NC_014834.1 4162047 4163096 R KEGG: mlo:mll6710 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(4162047..4163096) Rhodopseudomonas palustris DX-1 10066108 YP_004110172.1 CDS Rpdx1_3879 NC_014834.1 4163358 4163957 R manually curated; KEGG: mno:Mnod_8411 hypothetical protein; hypothetical protein complement(4163358..4163957) Rhodopseudomonas palustris DX-1 10066110 YP_004110173.1 CDS Rpdx1_3880 NC_014834.1 4163926 4164105 R KEGG: rec:RHECIAT_PB0000171 putative excisonase protein; putative excisonase protein complement(4163926..4164105) Rhodopseudomonas palustris DX-1 10066111 YP_004110174.1 CDS Rpdx1_3881 NC_014834.1 4164714 4166120 D TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; Hemerythrin HHE cation binding domain protein; KEGG: rsq:Rsph17025_2184 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: GGDEF domain containing protein; hemerythrin-like metal-binding domain-containing/PAS/PAC sensor -containing diguanylate cyclase 4164714..4166120 Rhodopseudomonas palustris DX-1 10066113 YP_004110175.1 CDS Rpdx1_3882 NC_014834.1 4166154 4167398 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2214 hypothetical protein; major facilitator superfamily protein complement(4166154..4167398) Rhodopseudomonas palustris DX-1 10066114 YP_004110176.1 CDS Rpdx1_3883 NC_014834.1 4167664 4169790 D KEGG: bja:bll2207 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; flagellar biosynthesis protein FlhA 4167664..4169790 Rhodopseudomonas palustris DX-1 10066115 YP_004110177.1 CDS Rpdx1_3884 NC_014834.1 4170124 4170324 D KEGG: bbt:BBta_6528 hypothetical protein; hypothetical protein 4170124..4170324 Rhodopseudomonas palustris DX-1 10066116 YP_004110178.1 CDS Rpdx1_3885 NC_014834.1 4170647 4171591 R PFAM: Anti-sigma K factor RskA; KEGG: bbt:BBta_6529 hypothetical protein; anti-sigma K factor Rska complement(4170647..4171591) Rhodopseudomonas palustris DX-1 10066117 YP_004110179.1 CDS Rpdx1_3886 NC_014834.1 4171591 4172139 R KEGG: bra:BRADO1500 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(4171591..4172139) Rhodopseudomonas palustris DX-1 10066118 YP_004110180.1 CDS Rpdx1_3887 NC_014834.1 4172317 4172745 R TIGRFAM: flagellar export protein FliJ; KEGG: bbt:BBta_6531 putative flagelar FliJ protein; flagellar export protein FliJ complement(4172317..4172745) Rhodopseudomonas palustris DX-1 10066119 YP_004110181.1 CDS Rpdx1_3888 NC_014834.1 4172854 4174179 R TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: bja:blr2201 flagellum-specific ATP synthase; SMART: AAA ATPase; FliI/YscN family ATPase complement(4172854..4174179) Rhodopseudomonas palustris DX-1 10066120 YP_004110182.1 CDS Rpdx1_3889 NC_014834.1 4174547 4175248 D KEGG: oca:OCAR_7111 cell cycle transcriptional regulator CtrA; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 4174547..4175248 Rhodopseudomonas palustris DX-1 10066121 YP_004110183.1 CDS Rpdx1_3890 NC_014834.1 4175541 4176419 R PFAM: MCP methyltransferase CheR-type; KEGG: nha:Nham_3372 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type; CheR-type MCP methyltransferase complement(4175541..4176419) Rhodopseudomonas palustris DX-1 10066122 YP_004110184.1 CDS Rpdx1_3891 NC_014834.1 4176416 4177591 R SMART: response regulator receiver; manually curated; KEGG: bbt:BBta_6556 chemotaxis-specific methylesterase; PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase complement(4176416..4177591) Rhodopseudomonas palustris DX-1 10066123 YP_004110185.1 CDS Rpdx1_3892 NC_014834.1 4177671 4178036 R KEGG: bbt:BBta_6557 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(4177671..4178036) Rhodopseudomonas palustris DX-1 10066124 YP_004110186.1 CDS Rpdx1_3893 NC_014834.1 4178104 4178604 R KEGG: bra:BRADO1474 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein complement(4178104..4178604) Rhodopseudomonas palustris DX-1 10066125 YP_004110187.1 CDS Rpdx1_3894 NC_014834.1 4178601 4181417 R KEGG: bbt:BBta_0524 chemotaxis protein CheA; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; response regulator receiver; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; response regulator receiver; CheA signal transduction histidine kinase complement(4178601..4181417) Rhodopseudomonas palustris DX-1 10066126 YP_004110188.1 CDS Rpdx1_3895 NC_014834.1 4181608 4182264 R PFAM: Protein of unknown function DUF2328; KEGG: bja:blr2191 hypothetical protein; hypothetical protein complement(4181608..4182264) Rhodopseudomonas palustris DX-1 10066127 YP_004110189.1 CDS Rpdx1_3896 NC_014834.1 4182398 4183225 D PFAM: inositol monophosphatase; KEGG: nwi:Nwi_0518 inositol monophosphatase; inositol monophosphatase 4182398..4183225 Rhodopseudomonas palustris DX-1 10066128 YP_004110190.1 CDS Rpdx1_3897 NC_014834.1 4183240 4183716 R KEGG: nha:Nham_3379 hypothetical protein; hypothetical protein complement(4183240..4183716) Rhodopseudomonas palustris DX-1 10066129 YP_004110191.1 CDS Rpdx1_3898 NC_014834.1 4183859 4184452 D PFAM: conserved hypothetical protein; KEGG: bja:bll2189 hypothetical protein; hypothetical protein 4183859..4184452 Rhodopseudomonas palustris DX-1 10066130 YP_004110192.1 CDS Rpdx1_3900 NC_014834.1 4184693 4185982 D KEGG: bra:BRADO1468 hypothetical protein; hypothetical protein 4184693..4185982 Rhodopseudomonas palustris DX-1 10066132 YP_004110193.1 CDS Rpdx1_3901 NC_014834.1 4186327 4186611 D manually curated; KEGG: shl:Shal_1751 hypothetical protein; hypothetical protein 4186327..4186611 Rhodopseudomonas palustris DX-1 10066134 YP_004110194.1 CDS Rpdx1_3902 NC_014834.1 4186865 4187185 D KEGG: mtb:TBMG_01424 hypothetical protein; hypothetical protein 4186865..4187185 Rhodopseudomonas palustris DX-1 10066135 YP_004110195.1 CDS Rpdx1_3903 NC_014834.1 4187351 4187782 R KEGG: bja:bll7047 hypothetical protein; hypothetical protein complement(4187351..4187782) Rhodopseudomonas palustris DX-1 10066136 YP_004110196.1 CDS Rpdx1_3904 NC_014834.1 4187889 4189433 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: nha:Nham_3384 hypothetical protein; thiamine pyrophosphate domain-containing TPP-binding protein complement(4187889..4189433) Rhodopseudomonas palustris DX-1 10066137 YP_004110197.1 CDS Rpdx1_3905 NC_014834.1 4189614 4190192 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bbt:BBta_6654 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 4189614..4190192 Rhodopseudomonas palustris DX-1 10066138 YP_004110198.1 CDS Rpdx1_3906 NC_014834.1 4190332 4191087 D KEGG: bja:blr7233 hypothetical protein; hypothetical protein 4190332..4191087 Rhodopseudomonas palustris DX-1 10066139 YP_004110199.1 CDS Rpdx1_3907 NC_014834.1 4191133 4191231 R hypothetical protein complement(4191133..4191231) Rhodopseudomonas palustris DX-1 10066140 YP_004110200.1 CDS Rpdx1_3908 NC_014834.1 4191290 4192105 R PFAM: Methyltransferase type 11; KEGG: rlg:Rleg_2561 methyltransferase type 11; type 11 methyltransferase complement(4191290..4192105) Rhodopseudomonas palustris DX-1 10066141 YP_004110201.1 CDS Rpdx1_3909 NC_014834.1 4192202 4193374 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_6658 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(4192202..4193374) Rhodopseudomonas palustris DX-1 10066142 YP_004110202.1 CDS Rpdx1_3910 NC_014834.1 4193718 4194983 D PFAM: cytochrome P450; KEGG: bja:blr7243 putative cytochrome P450; cytochrome P450 4193718..4194983 Rhodopseudomonas palustris DX-1 10066143 YP_004110203.1 CDS Rpdx1_3911 NC_014834.1 4195017 4196189 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO1442 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4195017..4196189 Rhodopseudomonas palustris DX-1 10066144 YP_004110204.1 CDS Rpdx1_3912 NC_014834.1 4196391 4197485 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bra:BRADO1441 formyl-coenzyme A transferase NAD(P)-binding; L-carnitine dehydratase/bile acid-inducible protein F 4196391..4197485 Rhodopseudomonas palustris DX-1 10066145 YP_004110205.1 CDS Rpdx1_3913 NC_014834.1 4197499 4198356 D KEGG: bra:BRADO1440 hypothetical protein; hypothetical protein 4197499..4198356 Rhodopseudomonas palustris DX-1 10066146 YP_004110206.1 CDS Rpdx1_3914 NC_014834.1 4198613 4200244 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: bja:blr7248 benzoylformate decarboxylase; thiamine pyrophosphate domain-containing TPP-binding protein 4198613..4200244 Rhodopseudomonas palustris DX-1 10066147 YP_004110207.1 CDS Rpdx1_3915 NC_014834.1 4200255 4201535 R PFAM: beta-lactamase; KEGG: bja:bll5709 hypothetical protein; beta-lactamase complement(4200255..4201535) Rhodopseudomonas palustris DX-1 10066148 YP_004110208.1 CDS Rpdx1_3916 NC_014834.1 4201595 4202137 R manually curated; PFAM: Appr-1-p processing domain protein; KEGG: bbt:BBta_5392 hypothetical protein; SMART: Appr-1-p processing domain protein; Appr-1-p processing protein complement(4201595..4202137) Rhodopseudomonas palustris DX-1 10066149 YP_004110209.1 CDS Rpdx1_3917 NC_014834.1 4202134 4202517 R manually curated; TIGRFAM: glutaredoxin-like protein; KEGG: bbt:BBta_5393 putative glutaredoxin family protein; PFAM: glutaredoxin; glutaredoxin-like protein complement(4202134..4202517) Rhodopseudomonas palustris DX-1 10066150 YP_004110210.1 CDS Rpdx1_3918 NC_014834.1 4202608 4204002 D PFAM: protein of unknown function DUF323; KEGG: bbt:BBta_5394 hypothetical protein; hypothetical protein 4202608..4204002 Rhodopseudomonas palustris DX-1 10066151 YP_004110211.1 CDS Rpdx1_3919 NC_014834.1 4204047 4205015 D KEGG: nha:Nham_1639 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260; methyltransferase 4204047..4205015 Rhodopseudomonas palustris DX-1 10066152 YP_004110212.1 CDS Rpdx1_3920 NC_014834.1 4205039 4205767 R KEGG: mno:Mnod_6017 hypothetical protein; hypothetical protein complement(4205039..4205767) Rhodopseudomonas palustris DX-1 10066153 YP_004110213.1 CDS Rpdx1_3921 NC_014834.1 4205903 4206136 R PFAM: BolA family protein; KEGG: bja:bsl5715 hypothetical protein; BolA family protein complement(4205903..4206136) Rhodopseudomonas palustris DX-1 10066154 YP_004110214.1 CDS Rpdx1_3922 NC_014834.1 4206302 4206664 D KEGG: bbt:BBta_5398 hypothetical protein; manually curated; PFAM: protein of unknown function DUF427; hypothetical protein 4206302..4206664 Rhodopseudomonas palustris DX-1 10066155 YP_004110215.1 CDS Rpdx1_3923 NC_014834.1 4206769 4207920 D PFAM: acyltransferase 3; KEGG: bbt:BBta_5400 hypothetical protein; acyltransferase 3 4206769..4207920 Rhodopseudomonas palustris DX-1 10066156 YP_004110216.1 CDS Rpdx1_3924 NC_014834.1 4208105 4210315 R TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: nha:Nham_1636 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine synthase II complement(4208105..4210315) Rhodopseudomonas palustris DX-1 10066157 YP_004110217.1 CDS Rpdx1_3926 NC_014834.1 4210602 4211966 R KEGG: rfr:Rfer_1328 tryptophan synthase subunit beta; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-phosphate dependent TrpB-like protein complement(4210602..4211966) Rhodopseudomonas palustris DX-1 10066159 YP_004110218.1 CDS Rpdx1_3928 NC_014834.1 4212694 4213488 D TIGRFAM: glutamate racemase; KEGG: bbt:BBta_5384 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 4212694..4213488 Rhodopseudomonas palustris DX-1 10066161 YP_004110219.1 CDS Rpdx1_3929 NC_014834.1 4213547 4213936 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: bja:blr5704 hypothetical protein; cupin 4213547..4213936 Rhodopseudomonas palustris DX-1 10066162 YP_004110220.1 CDS Rpdx1_3930 NC_014834.1 4213937 4214713 D KEGG: bja:blr5705 hypothetical protein; hypothetical protein 4213937..4214713 Rhodopseudomonas palustris DX-1 10066163 YP_004110221.1 CDS Rpdx1_3931 NC_014834.1 4214765 4215019 D KEGG: cyc:PCC7424_5686 hypothetical protein; hypothetical protein 4214765..4215019 Rhodopseudomonas palustris DX-1 10066164 YP_004110222.1 CDS Rpdx1_3932 NC_014834.1 4215003 4215545 D KEGG: ypz:YPZ3_pMT0050 hypothetical protein; hypothetical protein 4215003..4215545 Rhodopseudomonas palustris DX-1 10066165 YP_004110223.1 CDS Rpdx1_3933 NC_014834.1 4215752 4216369 D TIGRFAM: ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; KEGG: nha:Nham_1644 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 4215752..4216369 Rhodopseudomonas palustris DX-1 10066166 YP_004110224.1 CDS Rpdx1_3934 NC_014834.1 4216691 4217773 D KEGG: bbt:BBta_5390 putative L-allo-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase 4216691..4217773 Rhodopseudomonas palustris DX-1 10066167 YP_004110225.1 CDS Rpdx1_3935 NC_014834.1 4217807 4218607 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll7251 putative dehydrogenase; short-chain dehydrogenase/reductase SDR complement(4217807..4218607) Rhodopseudomonas palustris DX-1 10066168 YP_004110226.1 CDS Rpdx1_3936 NC_014834.1 4218667 4219362 R PFAM: Hly-III family protein; KEGG: oca:OCAR_5063 hemolysin-3 (hemolysin III) (Hly-III); Hly-III family protein complement(4218667..4219362) Rhodopseudomonas palustris DX-1 10066169 YP_004110227.1 CDS Rpdx1_3937 NC_014834.1 4219603 4221072 D PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: nwi:Nwi_3019 YcjX-like protein; hypothetical protein 4219603..4221072 Rhodopseudomonas palustris DX-1 10066170 YP_004110228.1 CDS Rpdx1_3938 NC_014834.1 4221069 4222163 D PFAM: Uncharacterised protein family UPF0283; KEGG: bra:BRADO1432 hypothetical protein; hypothetical protein 4221069..4222163 Rhodopseudomonas palustris DX-1 10066171 YP_004110229.1 CDS Rpdx1_3939 NC_014834.1 4222380 4224152 D manually curated; PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bra:BRADO1430 ferredoxin:adenylate/guanylate cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase 4222380..4224152 Rhodopseudomonas palustris DX-1 10066172 YP_004110230.1 CDS Rpdx1_3940 NC_014834.1 4224352 4224597 D KEGG: nha:Nham_3393 hypothetical protein; hypothetical protein 4224352..4224597 Rhodopseudomonas palustris DX-1 10066173 YP_004110231.1 CDS Rpdx1_3941 NC_014834.1 4224705 4225352 R KEGG: nha:Nham_3397 hypothetical protein; hypothetical protein complement(4224705..4225352) Rhodopseudomonas palustris DX-1 10066174 YP_004110232.1 CDS Rpdx1_3942 NC_014834.1 4225496 4228504 D KEGG: nwi:Nwi_3055 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 4225496..4228504 Rhodopseudomonas palustris DX-1 10066175 YP_004110233.1 CDS Rpdx1_3943 NC_014834.1 4228671 4229879 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbt:BBta_6680 acyl-coenzyme A transferase; L-carnitine dehydratase/bile acid-inducible protein F 4228671..4229879 Rhodopseudomonas palustris DX-1 10066176 YP_004110234.1 CDS Rpdx1_3944 NC_014834.1 4230187 4230960 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bja:blr3195 ferredoxin NADP+ reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 4230187..4230960 Rhodopseudomonas palustris DX-1 10066177 YP_004110235.1 CDS Rpdx1_3945 NC_014834.1 4231150 4232118 R KEGG: bja:bll7264 hypothetical protein; hypothetical protein complement(4231150..4232118) Rhodopseudomonas palustris DX-1 10066178 YP_004110236.1 CDS Rpdx1_3946 NC_014834.1 4232327 4232938 D PFAM: Glutathione S-transferase domain; KEGG: pla:Plav_3102 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein 4232327..4232938 Rhodopseudomonas palustris DX-1 10066179 YP_004110237.1 CDS Rpdx1_3947 NC_014834.1 4232972 4233862 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aav:Aave_3336 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4232972..4233862) Rhodopseudomonas palustris DX-1 10066180 YP_004110238.1 CDS Rpdx1_3948 NC_014834.1 4233873 4234313 R PFAM: protein of unknown function UPF0074; KEGG: rcu:RCOM_1954690 hypothetical protein; BadM/Rrf2 family transcriptional regulator complement(4233873..4234313) Rhodopseudomonas palustris DX-1 10066181 YP_004110239.1 CDS Rpdx1_3949 NC_014834.1 4234412 4234909 R PFAM: protein of unknown function DUF477; KEGG: bja:bll7265 hypothetical protein; hypothetical protein complement(4234412..4234909) Rhodopseudomonas palustris DX-1 10066182 YP_004110240.1 CDS Rpdx1_3950 NC_014834.1 4234922 4235824 R PFAM: protein of unknown function DUF477; KEGG: bbt:BBta_6688 hypothetical protein; hypothetical protein complement(4234922..4235824) Rhodopseudomonas palustris DX-1 10066183 YP_004110241.1 CDS Rpdx1_3951 NC_014834.1 4235841 4236455 R PFAM: LemA family protein; KEGG: bja:bll7267 lipoprotein; LemA family protein complement(4235841..4236455) Rhodopseudomonas palustris DX-1 10066184 YP_004110242.1 CDS Rpdx1_3952 NC_014834.1 4236533 4238863 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bja:bll7271 carbon monoxide dehydrogenase large chain; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit complement(4236533..4238863) Rhodopseudomonas palustris DX-1 10066185 YP_004110243.1 CDS Rpdx1_3954 NC_014834.1 4239117 4239992 R PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll7272 putative dihydrodipicolinate synthase; dihydrodipicolinate synthetase complement(4239117..4239992) Rhodopseudomonas palustris DX-1 10066187 YP_004110244.1 CDS Rpdx1_3955 NC_014834.1 4240125 4242242 D KEGG: bbt:BBta_0542 peptidase S9A family; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; oligopeptidase B 4240125..4242242 Rhodopseudomonas palustris DX-1 10066188 YP_004110245.1 CDS Rpdx1_3956 NC_014834.1 4242404 4243699 D TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bja:bll1235 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 4242404..4243699 Rhodopseudomonas palustris DX-1 10066189 YP_004110246.1 CDS Rpdx1_3957 NC_014834.1 4243703 4244485 D PFAM: alpha/beta hydrolase fold; KEGG: bja:bll1234 putative hydolase; alpha/beta hydrolase fold protein 4243703..4244485 Rhodopseudomonas palustris DX-1 10066190 YP_004110247.1 CDS Rpdx1_3958 NC_014834.1 4244824 4245747 R TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; KEGG: bra:BRADO1661 CbbX-like protein; SMART: AAA ATPase; CbbX protein complement(4244824..4245747) Rhodopseudomonas palustris DX-1 10066191 YP_004110248.1 CDS Rpdx1_3959 NC_014834.1 4245750 4246172 R KEGG: bbt:BBta_6396 ribulose 1,5-bisphosphate carboxylase small subunit; PFAM: ribulose bisphosphate carboxylase small chain; ribulose-bisphosphate carboxylase complement(4245750..4246172) Rhodopseudomonas palustris DX-1 10066192 YP_004110249.1 CDS Rpdx1_3960 NC_014834.1 4246185 4247642 R KEGG: bbt:BBta_6397 ribulose bisophosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; ribulose-bisphosphate carboxylase complement(4246185..4247642) Rhodopseudomonas palustris DX-1 10066193 YP_004110250.1 CDS Rpdx1_3961 NC_014834.1 4247842 4251315 R TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; CHASE domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: xal:XALc_1974 putative two-component system sensor-response regulator hybrid protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; multi-sensor hybrid histidine kinase complement(4247842..4251315) Rhodopseudomonas palustris DX-1 10066194 YP_004110251.1 CDS Rpdx1_3962 NC_014834.1 4251321 4252157 R KEGG: gem:GM21_1722 histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(4251321..4252157) Rhodopseudomonas palustris DX-1 10066195 YP_004110252.1 CDS Rpdx1_3963 NC_014834.1 4252180 4252869 R KEGG: mlo:mlr6690 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(4252180..4252869) Rhodopseudomonas palustris DX-1 10066196 YP_004110253.1 CDS Rpdx1_3964 NC_014834.1 4252866 4253006 R hypothetical protein complement(4252866..4253006) Rhodopseudomonas palustris DX-1 10066197 YP_004110254.1 CDS Rpdx1_3965 NC_014834.1 4253576 4254544 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nha:Nham_3755 LysR family transcriptional regulator; LysR family transcriptional regulator 4253576..4254544 Rhodopseudomonas palustris DX-1 10066198 YP_004110255.1 CDS Rpdx1_3966 NC_014834.1 4254717 4255928 R TIGRFAM: 5-aminolevulinic acid synthase; KEGG: bra:BRADO1651 5-aminolevulinate synthase; PFAM: aminotransferase class I and II; 5-aminolevulinate synthase complement(4254717..4255928) Rhodopseudomonas palustris DX-1 10066199 YP_004110256.1 CDS Rpdx1_3967 NC_014834.1 4255925 4256983 R TIGRFAM: photosynthetic complex assembly protein 2; KEGG: bbt:BBta_6406 hypothetical protein; photosynthetic complex assembly protein 2 complement(4255925..4256983) Rhodopseudomonas palustris DX-1 10066200 YP_004110257.1 CDS Rpdx1_3968 NC_014834.1 4256997 4258094 R TIGRFAM: magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase; KEGG: bra:BRADO1649 magnesium-protoporphyrin IX monomethyl ester cyclase; PFAM: Rubrerythrin; magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase complement(4256997..4258094) Rhodopseudomonas palustris DX-1 10066201 YP_004110258.1 CDS Rpdx1_3969 NC_014834.1 4258091 4258390 R KEGG: mdi:METDI5864 hypothetical protein; hypothetical protein complement(4258091..4258390) Rhodopseudomonas palustris DX-1 10066202 YP_004110259.1 CDS Rpdx1_3970 NC_014834.1 4258393 4258899 R TIGRFAM: photosynthetic complex assembly protein; KEGG: bbt:BBta_6409 hypothetical protein; photosynthetic complex assembly protein complement(4258393..4258899) Rhodopseudomonas palustris DX-1 10066203 YP_004110260.1 CDS Rpdx1_3971 NC_014834.1 4258913 4259575 R KEGG: mex:Mext_4809 putative photosynthetic complex assembly protein; putative photosynthetic complex assembly protein complement(4258913..4259575) Rhodopseudomonas palustris DX-1 10066204 YP_004110261.1 CDS Rpdx1_3972 NC_014834.1 4259572 4260339 R KEGG: bbt:BBta_6411 reaction center protein H chain (photosynthetic reaction center H subunit); TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit ; PRC-barrel domain protein; photosynthetic reaction center subunit H complement(4259572..4260339) Rhodopseudomonas palustris DX-1 10066205 YP_004110262.1 CDS Rpdx1_3973 NC_014834.1 4260362 4261795 R PFAM: PUCC protein; KEGG: bra:BRADO1644 photosynthetic complex (LH1) assembly protein LhaA; PUCC protein complement(4260362..4261795) Rhodopseudomonas palustris DX-1 10066206 YP_004110263.1 CDS Rpdx1_3974 NC_014834.1 4261792 4262493 R TIGRFAM: magnesium protoporphyrin O-methyltransferase; KEGG: alv:Alvin_2638 magnesium protoporphyrin O-methyltransferase; PFAM: Magnesium-protoporphyrin IX methyltransferase domain protein; magnesium protoporphyrin O-methyltransferase complement(4261792..4262493) Rhodopseudomonas palustris DX-1 10066207 YP_004110264.1 CDS Rpdx1_3975 NC_014834.1 4262493 4263431 R TIGRFAM: light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; KEGG: bbt:BBta_6414 protochlorophyllide reductase iron-sulfur ATP-binding protein; PFAM: NifH/frxC-family protein; light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein complement(4262493..4263431) Rhodopseudomonas palustris DX-1 10066208 YP_004110265.1 CDS Rpdx1_3976 NC_014834.1 4263428 4267174 R TIGRFAM: magnesium chelatase, H subunit; KEGG: rce:RC1_2113 magnesium chelatase subunit H; PFAM: CobN/magnesium chelatase; magnesium chelatase subunit H complement(4263428..4267174) Rhodopseudomonas palustris DX-1 10066209 YP_004110266.1 CDS Rpdx1_3977 NC_014834.1 4267149 4268771 R KEGG: rce:RC1_2114 light-independent protochlorophyllide reductase subunit B; TIGRFAM: light-independent protochlorophyllide reductase, B subunit; PFAM: oxidoreductase/nitrogenase component 1; Proto-chlorophyllide reductase 57 kD subunit; light-independent protochlorophyllide reductase subunit B complement(4267149..4268771) Rhodopseudomonas palustris DX-1 10066210 YP_004110267.1 CDS Rpdx1_3978 NC_014834.1 4268775 4270064 R KEGG: bbt:BBta_6417 light-independent protochlorophyllide reductase subunit N; TIGRFAM: light-independent protochlorophyllide reductase, N subunit; PFAM: oxidoreductase/nitrogenase component 1; light-independent protochlorophyllide reductase, N subunit complement(4268775..4270064) Rhodopseudomonas palustris DX-1 10066211 YP_004110268.1 CDS Rpdx1_3979 NC_014834.1 4270061 4270687 R KEGG: bra:BRADO1638 2-vinyl bacteriochlorophyllide hydratase; TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase; PFAM: 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD complement(4270061..4270687) Rhodopseudomonas palustris DX-1 10066212 YP_004110269.1 CDS Rpdx1_3980 NC_014834.1 4270875 4271756 D KEGG: rce:RC1_2117 coenzyme B12-binding aerobic repressor; hypothetical protein 4270875..4271756 Rhodopseudomonas palustris DX-1 10066213 YP_004110270.1 CDS Rpdx1_3981 NC_014834.1 4271818 4272492 D KEGG: bra:BRADO1626 heme oxygenase; PFAM: Haem oxygenase-like; heme oxygenase 4271818..4272492 Rhodopseudomonas palustris DX-1 10066214 YP_004110271.1 CDS Rpdx1_3982 NC_014834.1 4272523 4274718 R TIGRFAM: PAS sensor protein; PFAM: PAS fold-2 domain protein; GAF domain protein; Phytochrome central region domain protein; PAS fold domain protein; KEGG: bbt:BBta_6428 bacteriophytochrome; SMART: GAF domain protein; putative PAS/PAC sensor protein complement(4272523..4274718) Rhodopseudomonas palustris DX-1 10066215 YP_004110272.1 CDS Rpdx1_3983 NC_014834.1 4274719 4276116 R TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold-4 domain protein; KEGG: bra:BRADO1629 transcriptional regulator PpsR2; SMART: PAS domain containing protein; transcriptional regulator PpsR complement(4274719..4276116) Rhodopseudomonas palustris DX-1 10066216 YP_004110273.1 CDS Rpdx1_3984 NC_014834.1 4276439 4276858 D PFAM: cytochrome c class I; KEGG: bra:BRADO1630 cytochrome c2; cytochrome c class I 4276439..4276858 Rhodopseudomonas palustris DX-1 10066217 YP_004110274.1 CDS Rpdx1_3985 NC_014834.1 4277044 4277316 R KEGG: bbt:BBta_6425 hypothetical protein; hypothetical protein complement(4277044..4277316) Rhodopseudomonas palustris DX-1 10066218 YP_004110275.1 CDS Rpdx1_3986 NC_014834.1 4277350 4277814 R PFAM: TspO/MBR family protein; KEGG: mpt:Mpe_A2778 tryptophan-rich sensory protein; TspO and MBR-like protein complement(4277350..4277814) Rhodopseudomonas palustris DX-1 10066219 YP_004110276.1 CDS Rpdx1_3987 NC_014834.1 4277835 4279040 R KEGG: bra:BRADO1632 geranylgeranyl reductase; TIGRFAM: geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase; geranylgeranyl reductase complement(4277835..4279040) Rhodopseudomonas palustris DX-1 10066220 YP_004110277.1 CDS Rpdx1_3988 NC_014834.1 4279042 4280367 R PFAM: PUCC protein; KEGG: bbt:BBta_6423 light harvesting pigment major facilitator family (MFS) transporter, Bch2-like protein; PUCC protein complement(4279042..4280367) Rhodopseudomonas palustris DX-1 10066221 YP_004110278.1 CDS Rpdx1_3989 NC_014834.1 4280370 4281263 R KEGG: alv:Alvin_2645 bacteriochlorophyll/chlorophyll synthetase; TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; bacteriochlorophyll/chlorophyll synthetase complement(4280370..4281263) Rhodopseudomonas palustris DX-1 10066222 YP_004110279.1 CDS Rpdx1_3990 NC_014834.1 4281256 4282689 R TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold domain protein; PAS fold-4 domain protein; KEGG: rce:RC1_2118 transcriptional regulator CrtJ (homologous to PpsR); SMART: PAS domain containing protein; transcriptional regulator PpsR complement(4281256..4282689) Rhodopseudomonas palustris DX-1 10066223 YP_004110280.1 CDS Rpdx1_3991 NC_014834.1 4282978 4283901 R KEGG: bra:BRADO1625 photosynthetic reaction center M protein; TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; photosynthetic reaction center, M subunit complement(4282978..4283901) Rhodopseudomonas palustris DX-1 10066224 YP_004110281.1 CDS Rpdx1_3992 NC_014834.1 4283929 4284762 R KEGG: bbt:BBta_6431 photosynthetic reaction center subunit L; TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; photosynthetic reaction center L subunit complement(4283929..4284762) Rhodopseudomonas palustris DX-1 10066225 YP_004110282.1 CDS Rpdx1_3993 NC_014834.1 4284895 4285086 R PFAM: antenna complex alpha/beta subunit; KEGG: bra:BRADO1623 light harvesting 1 alpha subunit; antenna complex subunit alpha/beta complement(4284895..4285086) Rhodopseudomonas palustris DX-1 10066226 YP_004110283.1 CDS Rpdx1_3994 NC_014834.1 4285102 4285299 R PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_6433 light harvesting 1 beta subunit; antenna complex subunit alpha/beta complement(4285102..4285299) Rhodopseudomonas palustris DX-1 10066227 YP_004110284.1 CDS Rpdx1_3995 NC_014834.1 4285454 4285678 R KEGG: met:M446_3700 hypothetical protein; hypothetical protein complement(4285454..4285678) Rhodopseudomonas palustris DX-1 10066228 YP_004110285.1 CDS Rpdx1_3996 NC_014834.1 4285756 4287204 R KEGG: bra:BRADO1620 bacteriochlorophyllide reductase Z subunit; TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; chlorophyllide reductase subunit Z complement(4285756..4287204) Rhodopseudomonas palustris DX-1 10066229 YP_004110286.1 CDS Rpdx1_3997 NC_014834.1 4287204 4288793 R TIGRFAM: chlorophyllide reductase subunit Y; KEGG: bbt:BBta_6436 bacteriochlorophyllide reductase subunit; chlorophyllide reductase subunit Y complement(4287204..4288793) Rhodopseudomonas palustris DX-1 10066230 YP_004110287.1 CDS Rpdx1_3998 NC_014834.1 4288817 4289815 R TIGRFAM: chlorophyllide reductase iron protein subunit X; KEGG: mrd:Mrad2831_2818 chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X complement(4288817..4289815) Rhodopseudomonas palustris DX-1 10066231 YP_004110288.1 CDS Rpdx1_3999 NC_014834.1 4289815 4290753 R KEGG: rce:RC1_2093 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase, putative; TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; chlorophyll synthesis pathway protein BchC complement(4289815..4290753) Rhodopseudomonas palustris DX-1 10066232 YP_004110289.1 CDS Rpdx1_4000 NC_014834.1 4290842 4291963 R PFAM: O-methyltransferase family 2; KEGG: rce:RC1_2092 hydroxyneurosporene methyltransferase; O-methyltransferase family 2 complement(4290842..4291963) Rhodopseudomonas palustris DX-1 10066233 YP_004110290.1 CDS Rpdx1_4001 NC_014834.1 4292013 4292879 R PFAM: Polyprenyl synthetase; KEGG: bra:BRADO1615 geranylgeranyl pyrophosphate synthetase (GgpP synthetase) (farnesyltranstransferase); polyprenyl synthetase complement(4292013..4292879) Rhodopseudomonas palustris DX-1 10066234 YP_004110291.1 CDS Rpdx1_4002 NC_014834.1 4292999 4294558 D KEGG: bra:BRADO1614 hydroxyneurosporene and rhodopin dehydrogenase; TIGRFAM: phytoene desaturase; PFAM: FAD dependent oxidoreductase; phytoene desaturase 4292999..4294558 Rhodopseudomonas palustris DX-1 10066235 YP_004110292.1 CDS Rpdx1_4003 NC_014834.1 4294563 4295516 D PFAM: hydroxyneurosporene synthase; KEGG: bbt:BBta_6442 hydroxyneurosporene synthase; hydroxyneurosporene synthase 4294563..4295516 Rhodopseudomonas palustris DX-1 10066236 YP_004110293.1 CDS Rpdx1_4004 NC_014834.1 4295644 4295928 D KEGG: nwi:Nwi_1053 excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; excinuclease ABC subunit C domain-containing protein 4295644..4295928 Rhodopseudomonas palustris DX-1 10066237 YP_004110294.1 CDS Rpdx1_4005 NC_014834.1 4295972 4296124 R KEGG: bbt:BBta_6443 hypothetical protein; hypothetical protein complement(4295972..4296124) Rhodopseudomonas palustris DX-1 10066238 YP_004110295.1 CDS Rpdx1_4006 NC_014834.1 4296121 4296255 R KEGG: bbt:BBta_6443 hypothetical protein; hypothetical protein complement(4296121..4296255) Rhodopseudomonas palustris DX-1 10066239 YP_004110296.1 CDS Rpdx1_4007 NC_014834.1 4296320 4297234 R KEGG: pzu:PHZ_c2874 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase; coproporphyrinogen oxidase complement(4296320..4297234) Rhodopseudomonas palustris DX-1 10066240 YP_004110297.1 CDS Rpdx1_4008 NC_014834.1 4297570 4298637 R KEGG: rce:RC1_2086 phytoene synthase; PFAM: Squalene/phytoene synthase; phytoene synthase complement(4297570..4298637) Rhodopseudomonas palustris DX-1 10066241 YP_004110298.1 CDS Rpdx1_4009 NC_014834.1 4298634 4300169 R KEGG: bra:BRADO1610 phytoene dehydrogenase (phytoene desaturase); TIGRFAM: phytoene desaturase; PFAM: amine oxidase; phytoene desaturase complement(4298634..4300169) Rhodopseudomonas palustris DX-1 10066242 YP_004110299.1 CDS Rpdx1_4010 NC_014834.1 4300245 4301132 R KEGG: bra:BRADO1609 putative alpha/beta hydrolase, putative protoporphyrin IX magnesium chelatase BchO-like; TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; magnesium chelatase accessory protein complement(4300245..4301132) Rhodopseudomonas palustris DX-1 10066243 YP_004110300.1 CDS Rpdx1_4011 NC_014834.1 4301291 4302253 R PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO1608 putative alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4301291..4302253) Rhodopseudomonas palustris DX-1 10066244 YP_004110301.1 CDS Rpdx1_4012 NC_014834.1 4302364 4303410 D TIGRFAM: uroporphyrinogen decarboxylase; KEGG: nha:Nham_2936 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 4302364..4303410 Rhodopseudomonas palustris DX-1 10066245 YP_004110302.1 CDS Rpdx1_4013 NC_014834.1 4303787 4304518 D PFAM: type IV pilus assembly PilZ; KEGG: bra:BRADO5217 hypothetical protein; type IV pilus assembly PilZ 4303787..4304518 Rhodopseudomonas palustris DX-1 10066246 YP_004110303.1 CDS Rpdx1_4014 NC_014834.1 4304544 4306316 R KEGG: rce:RC1_2082 magnesium chelatase subunit D; TIGRFAM: magnesium chelatase ATPase subunit D; SMART: von Willebrand factor type A; magnesium chelatase ATPase subunit D complement(4304544..4306316) Rhodopseudomonas palustris DX-1 10066247 YP_004110304.1 CDS Rpdx1_4015 NC_014834.1 4306313 4307335 R SMART: AAA ATPase; TIGRFAM: magnesium chelatase ATPase subunit I; KEGG: rce:RC1_2081 magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase ChlI subunit; magnesium chelatase ATPase subunit I complement(4306313..4307335) Rhodopseudomonas palustris DX-1 10066248 YP_004110305.1 CDS Rpdx1_4016 NC_014834.1 4307341 4308321 R KEGG: bra:BRADO1874 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase complement(4307341..4308321) Rhodopseudomonas palustris DX-1 10066249 YP_004110306.1 CDS Rpdx1_4017 NC_014834.1 4308571 4309884 D KEGG: nha:Nham_1076 hypothetical protein; hypothetical protein 4308571..4309884 Rhodopseudomonas palustris DX-1 10066250 YP_004110307.1 CDS Rpdx1_4018 NC_014834.1 4309884 4311488 D KEGG: msl:Msil_2066 dienelactone hydrolase; dienelactone hydrolase 4309884..4311488 Rhodopseudomonas palustris DX-1 10066251 YP_004110308.1 CDS Rpdx1_4019 NC_014834.1 4311488 4311976 D PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: rce:RC1_2526 hypothetical protein; NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 4311488..4311976 Rhodopseudomonas palustris DX-1 10066252 YP_004110309.1 CDS Rpdx1_4020 NC_014834.1 4312037 4313260 D PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: rce:RC1_0144 coenzyme F420 hydrogenase; coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein 4312037..4313260 Rhodopseudomonas palustris DX-1 10066253 YP_004110310.1 CDS Rpdx1_4021 NC_014834.1 4313376 4313825 D PFAM: Protein of unknown function DUF2383; KEGG: bra:BRADO4339 putative ribonucleotide reductase; hypothetical protein 4313376..4313825 Rhodopseudomonas palustris DX-1 10066254 YP_004110311.1 CDS Rpdx1_4022 NC_014834.1 4314280 4314726 R KEGG: bra:BRADO6559 hypothetical protein; hypothetical protein complement(4314280..4314726) Rhodopseudomonas palustris DX-1 10066255 YP_004110312.1 CDS Rpdx1_4023 NC_014834.1 4314933 4318100 R KEGG: bja:blr1516 RND multidrug efflux transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(4314933..4318100) Rhodopseudomonas palustris DX-1 10066256 YP_004110313.1 CDS Rpdx1_4024 NC_014834.1 4318110 4319309 R KEGG: bja:blr1515 RND multidrug efflux membrane permease; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(4318110..4319309) Rhodopseudomonas palustris DX-1 10066257 YP_004110314.1 CDS Rpdx1_4025 NC_014834.1 4319667 4321214 R PFAM: FAD dependent oxidoreductase; KEGG: pzu:PHZ_c1914 flavin binding monooxygenase; FAD dependent oxidoreductase complement(4319667..4321214) Rhodopseudomonas palustris DX-1 10066258 YP_004110315.1 CDS Rpdx1_4026 NC_014834.1 4321355 4321648 R KEGG: bcr:BCAH187_A0933 hypothetical protein; hypothetical protein complement(4321355..4321648) Rhodopseudomonas palustris DX-1 10066259 YP_004110316.1 CDS Rpdx1_4027 NC_014834.1 4321664 4322308 R KEGG: bbt:BBta_3084 hypothetical protein; hypothetical protein complement(4321664..4322308) Rhodopseudomonas palustris DX-1 10066260 YP_004110317.1 CDS Rpdx1_4028 NC_014834.1 4322327 4323766 R PFAM: PUCC protein; KEGG: bbt:BBta_3083 chlorophyll major facilitator superfamily (MFS) exporter PucC; PUCC protein complement(4322327..4323766) Rhodopseudomonas palustris DX-1 10066261 YP_004110318.1 CDS Rpdx1_4029 NC_014834.1 4323952 4324131 R PFAM: antenna complex alpha/beta subunit; KEGG: hha:Hhal_1408 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta complement(4323952..4324131) Rhodopseudomonas palustris DX-1 10066262 YP_004110319.1 CDS Rpdx1_4030 NC_014834.1 4324144 4324299 R PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_3081 light harvesting protein B-800-850; antenna complex subunit alpha/beta complement(4324144..4324299) Rhodopseudomonas palustris DX-1 10066263 YP_004110320.1 CDS Rpdx1_4031 NC_014834.1 4324619 4326934 D KEGG: bbt:BBta_3080 bacteriophytochrome; PFAM: GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein; multi-sensor signal transduction histidine kinase 4324619..4326934 Rhodopseudomonas palustris DX-1 10066264 YP_004110321.1 CDS Rpdx1_4032 NC_014834.1 4326953 4327624 D KEGG: bbt:BBta_3079 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family two component transcriptional regulator 4326953..4327624 Rhodopseudomonas palustris DX-1 10066265 YP_004110322.1 CDS Rpdx1_4033 NC_014834.1 4327756 4328997 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr2779 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F 4327756..4328997 Rhodopseudomonas palustris DX-1 10066266 YP_004110323.1 CDS Rpdx1_4034 NC_014834.1 4329001 4329246 R KEGG: ace:Acel_0511 hypothetical protein; hypothetical protein complement(4329001..4329246) Rhodopseudomonas palustris DX-1 10066267 YP_004110324.1 CDS Rpdx1_4035 NC_014834.1 4329288 4330547 R PFAM: NnrS family protein; KEGG: bja:bll7083 hypothetical protein; NnrS family protein complement(4329288..4330547) Rhodopseudomonas palustris DX-1 10066268 YP_004110325.1 CDS Rpdx1_4036 NC_014834.1 4330673 4331365 R KEGG: NnrU family protein; NnrU family protein complement(4330673..4331365) Rhodopseudomonas palustris DX-1 10066269 YP_004110326.1 CDS Rpdx1_4037 NC_014834.1 4331543 4333195 R KEGG: bja:blr2389 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase, alpha-D-glucose phosphate-specific complement(4331543..4333195) Rhodopseudomonas palustris DX-1 10066270 YP_004110327.1 CDS Rpdx1_4038 NC_014834.1 4333542 4334387 R PFAM: alpha/beta hydrolase fold; KEGG: bja:blr6127 hypothetical protein; alpha/beta hydrolase fold protein complement(4333542..4334387) Rhodopseudomonas palustris DX-1 10066271 YP_004110328.1 CDS Rpdx1_4039 NC_014834.1 4334583 4334945 R KEGG: msl:Msil_3741 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver complement(4334583..4334945) Rhodopseudomonas palustris DX-1 10066272 YP_004110329.1 CDS Rpdx1_4040 NC_014834.1 4335230 4336066 R PFAM: metallophosphoesterase; KEGG: bbt:BBta_5850 hypothetical protein; metallophosphoesterase complement(4335230..4336066) Rhodopseudomonas palustris DX-1 10066273 YP_004110330.1 CDS Rpdx1_4041 NC_014834.1 4336091 4337152 R KEGG: bbt:BBta_5851 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein complement(4336091..4337152) Rhodopseudomonas palustris DX-1 10066274 YP_004110331.1 CDS Rpdx1_4042 NC_014834.1 4337149 4337934 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO5360 molybdenum ABC transporter permease; binding-protein-dependent transporter inner membrane component complement(4337149..4337934) Rhodopseudomonas palustris DX-1 10066275 YP_004110332.1 CDS Rpdx1_4043 NC_014834.1 4337939 4338754 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_5853 putative permease protein; binding-protein-dependent transporter inner membrane component complement(4337939..4338754) Rhodopseudomonas palustris DX-1 10066276 YP_004110333.1 CDS Rpdx1_4044 NC_014834.1 4338801 4339808 R PFAM: extracellular solute-binding protein family 1; KEGG: bra:BRADO5362 iron ABC transporter; family 1 extracellular solute-binding protein complement(4338801..4339808) Rhodopseudomonas palustris DX-1 10066277 YP_004110334.1 CDS Rpdx1_4045 NC_014834.1 4340154 4340393 D KEGG: apb:SAR116_0099 hypothetical protein; hypothetical protein 4340154..4340393 Rhodopseudomonas palustris DX-1 10066278 YP_004110335.1 CDS Rpdx1_4046 NC_014834.1 4340656 4341120 D KEGG: ddr:Deide_2p01890 putative phosphate ABC transporter, permease component, PstC; hypothetical protein 4340656..4341120 Rhodopseudomonas palustris DX-1 10066279 YP_004110336.1 CDS Rpdx1_4047 NC_014834.1 4341081 4341419 R KEGG: cwo:Cwoe_3413 hypothetical protein; hypothetical protein complement(4341081..4341419) Rhodopseudomonas palustris DX-1 10066280 YP_004110337.1 CDS Rpdx1_4048 NC_014834.1 4341449 4343068 D PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_0716 peptide/oligopeptide/nickel ABC transporter substrate-binding protein; family 5 extracellular solute-binding protein 4341449..4343068 Rhodopseudomonas palustris DX-1 10066281 YP_004110338.1 CDS Rpdx1_4049 NC_014834.1 4343234 4344247 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr1037 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 4343234..4344247 Rhodopseudomonas palustris DX-1 10066282 YP_004110339.1 CDS Rpdx1_4050 NC_014834.1 4344258 4345169 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_0718 putative dipeptide/oligopeptide/nickel ABC transporter, permease protein; binding-protein-dependent transporter inner membrane component 4344258..4345169 Rhodopseudomonas palustris DX-1 10066283 YP_004110340.1 CDS Rpdx1_4051 NC_014834.1 4345172 4347013 D KEGG: bja:blr1039 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter-like protein 4345172..4347013 Rhodopseudomonas palustris DX-1 10066284 YP_004110341.1 CDS Rpdx1_4052 NC_014834.1 4347160 4347339 D KEGG: bja:bsr1040 hypothetical protein; hypothetical protein 4347160..4347339 Rhodopseudomonas palustris DX-1 10066285 YP_004110342.1 CDS Rpdx1_4053 NC_014834.1 4347287 4348744 D KEGG: bbt:BBta_0721 amidase; TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase; amidohydrolase 3 4347287..4348744 Rhodopseudomonas palustris DX-1 10066286 YP_004110343.1 CDS Rpdx1_4054 NC_014834.1 4348747 4349142 D KEGG: bra:BRADO6817 hypothetical protein; hypothetical protein 4348747..4349142 Rhodopseudomonas palustris DX-1 10066287 YP_004110344.1 CDS Rpdx1_4055 NC_014834.1 4349139 4349882 D KEGG: bbt:BBta_0723 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4349139..4349882 Rhodopseudomonas palustris DX-1 10066288 YP_004110345.1 CDS Rpdx1_4056 NC_014834.1 4349879 4351684 D KEGG: bbt:BBta_0724 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase; allophanate hydrolase 4349879..4351684 Rhodopseudomonas palustris DX-1 10066289 YP_004110346.1 CDS Rpdx1_4057 NC_014834.1 4351699 4353513 R PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: ret:RHE_CH02492 chloride channel protein; Cl- channel voltage-gated family protein complement(4351699..4353513) Rhodopseudomonas palustris DX-1 10066290 YP_004110347.1 CDS Rpdx1_4058 NC_014834.1 4353760 4354566 D KEGG: bbt:BBta_4584 putative gamma-glutamyl hydrolase family protein; PFAM: peptidase C26; gamma-glutamyl-gamma-aminobutyrate hydrolase 4353760..4354566 Rhodopseudomonas palustris DX-1 10066291 YP_004110348.1 CDS Rpdx1_4059 NC_014834.1 4354794 4356644 R TIGRFAM: dihydroxy-acid dehydratase; KEGG: bja:bll4536 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(4354794..4356644) Rhodopseudomonas palustris DX-1 10066292 YP_004110349.1 CDS Rpdx1_4060 NC_014834.1 4356971 4358179 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rlt:Rleg2_2385 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 4356971..4358179 Rhodopseudomonas palustris DX-1 10066293 YP_004110350.1 CDS Rpdx1_4061 NC_014834.1 4358270 4359286 D manually curated; KEGG: azc:AZC_2320 hypothetical protein; hypothetical protein 4358270..4359286 Rhodopseudomonas palustris DX-1 10066294 YP_004110351.1 CDS Rpdx1_4062 NC_014834.1 4359315 4361225 R KEGG: bja:blr3217 NorD protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; von Willebrand factor type A complement(4359315..4361225) Rhodopseudomonas palustris DX-1 10066295 YP_004110352.1 CDS Rpdx1_4063 NC_014834.1 4361366 4362178 R PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bja:blr3216 NorQ protein; ATPase complement(4361366..4362178) Rhodopseudomonas palustris DX-1 10066296 YP_004110353.1 CDS Rpdx1_4064 NC_014834.1 4362235 4363581 R KEGG: bja:blr3215 nitric oxide reductase subunit B; PFAM: cytochrome c oxidase subunit I; nitric-oxide reductase complement(4362235..4363581) Rhodopseudomonas palustris DX-1 10066297 YP_004110354.1 CDS Rpdx1_4065 NC_014834.1 4363619 4364071 R KEGG: bmr:BMI_II242 nitric-oxide reductase, small subunit; nitric-oxide reductase small subunit complement(4363619..4364071) Rhodopseudomonas palustris DX-1 10066298 YP_004110355.1 CDS Rpdx1_4066 NC_014834.1 4364184 4364453 R KEGG: bja:bsr3213 hypothetical protein; hypothetical protein complement(4364184..4364453) Rhodopseudomonas palustris DX-1 10066299 YP_004110356.1 CDS Rpdx1_4067 NC_014834.1 4364458 4365066 R PFAM: cytochrome c oxidase subunit III; KEGG: bbt:BBta_2086 NorE protein involved in nitric oxide reduction; cytochrome c oxidase subunit III complement(4364458..4365066) Rhodopseudomonas palustris DX-1 10066300 YP_004110357.1 CDS Rpdx1_4068 NC_014834.1 4365204 4365359 D KEGG: bra:BRADO1773 putative signal peptide; hypothetical protein 4365204..4365359 Rhodopseudomonas palustris DX-1 10066301 YP_004110358.1 CDS Rpdx1_4069 NC_014834.1 4365366 4366319 R KEGG: bja:blr2724 hypothetical protein; hypothetical protein complement(4365366..4366319) Rhodopseudomonas palustris DX-1 10066302 YP_004110359.1 CDS Rpdx1_4070 NC_014834.1 4366357 4369665 R PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; carboxyl transferase; KEGG: bja:bll7292 pyruvate carboxylase; carbamoyl-phosphate synthase L chain ATP-binding protein complement(4366357..4369665) Rhodopseudomonas palustris DX-1 10066303 YP_004110360.1 CDS Rpdx1_4071 NC_014834.1 4369727 4371442 R PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll7293 acyl-CoA synthetase; AMP-dependent synthetase and ligase complement(4369727..4371442) Rhodopseudomonas palustris DX-1 10066304 YP_004110361.1 CDS Rpdx1_4072 NC_014834.1 4371469 4372353 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3435 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(4371469..4372353) Rhodopseudomonas palustris DX-1 10066305 YP_004110362.1 CDS Rpdx1_4073 NC_014834.1 4372350 4373306 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3428 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(4372350..4373306) Rhodopseudomonas palustris DX-1 10066306 YP_004110363.1 CDS Rpdx1_4074 NC_014834.1 4373359 4374912 R PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_3427 extracellular solute-binding protein; family 5 extracellular solute-binding protein complement(4373359..4374912) Rhodopseudomonas palustris DX-1 10066307 YP_004110364.1 CDS Rpdx1_4075 NC_014834.1 4374903 4375952 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: vei:Veis_3426 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(4374903..4375952) Rhodopseudomonas palustris DX-1 10066308 YP_004110365.1 CDS Rpdx1_4076 NC_014834.1 4375949 4376989 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: vei:Veis_3425 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(4375949..4376989) Rhodopseudomonas palustris DX-1 10066309 YP_004110366.1 CDS Rpdx1_4077 NC_014834.1 4377232 4378044 D KEGG: adg:Adeg_2096 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4377232..4378044 Rhodopseudomonas palustris DX-1 10066310 YP_004110367.1 CDS Rpdx1_4078 NC_014834.1 4378618 4378809 D KEGG: bbt:BBta_2219 hypothetical protein; hypothetical protein 4378618..4378809 Rhodopseudomonas palustris DX-1 10066311 YP_004110368.1 CDS Rpdx1_4079 NC_014834.1 4379061 4379846 D PFAM: NLPA lipoprotein; KEGG: azl:AZL_d03570 D-methionine transport system substrate-binding protein; NLPA lipoprotein 4379061..4379846 Rhodopseudomonas palustris DX-1 10066312 YP_004110369.1 CDS Rpdx1_4080 NC_014834.1 4379942 4381279 D KEGG: azo:azo2395 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate--CoA ligase 4379942..4381279 Rhodopseudomonas palustris DX-1 10066313 YP_004110370.1 CDS Rpdx1_4081 NC_014834.1 4381504 4382505 R PFAM: Integrase catalytic region; KEGG: swi:Swit_2359 integrase catalytic subunit; Integrase catalytic subunit complement(4381504..4382505) Rhodopseudomonas palustris DX-1 10066314 YP_004110371.1 CDS Rpdx1_4083 NC_014834.1 4384196 4384969 R KEGG: bra:BRADO4285 D-methionine ABC transporter protein, periplasmic binding protein; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein complement(4384196..4384969) Rhodopseudomonas palustris DX-1 10066316 YP_004110372.1 CDS Rpdx1_4084 NC_014834.1 4384998 4385666 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1144 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component complement(4384998..4385666) Rhodopseudomonas palustris DX-1 10066317 YP_004110373.1 CDS Rpdx1_4085 NC_014834.1 4385656 4386762 R KEGG: azc:AZC_3691 ABC transporter ATP-binding protein; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; ABC transporter-like protein complement(4385656..4386762) Rhodopseudomonas palustris DX-1 10066318 YP_004110374.1 CDS Rpdx1_4086 NC_014834.1 4386952 4387899 R KEGG: msl:Msil_2419 serine O-acetyltransferase; Serine O-acetyltransferase complement(4386952..4387899) Rhodopseudomonas palustris DX-1 10066319 YP_004110375.1 CDS Rpdx1_4087 NC_014834.1 4388059 4390038 R KEGG: mag:amb1849 cysteine desulfurase 1; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; cysteine desulfurase complement(4388059..4390038) Rhodopseudomonas palustris DX-1 10066320 YP_004110376.1 CDS Rpdx1_4088 NC_014834.1 4390025 4390969 R KEGG: azl:AZL_a00930 hypothetical protein; hypothetical protein complement(4390025..4390969) Rhodopseudomonas palustris DX-1 10066321 YP_004110377.1 CDS Rpdx1_4089 NC_014834.1 4391513 4391911 D KEGG: bbt:BBta_3429 hypothetical protein; hypothetical protein 4391513..4391911 Rhodopseudomonas palustris DX-1 10066322 YP_004110378.1 CDS Rpdx1_4090 NC_014834.1 4392009 4392404 D KEGG: bbt:BBta_3428 hypothetical protein; hypothetical protein 4392009..4392404 Rhodopseudomonas palustris DX-1 10066323 YP_004110379.1 CDS Rpdx1_4091 NC_014834.1 4392492 4393886 D KEGG: bbt:BBta_p0060 secretion protein HlyD precursor; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 4392492..4393886 Rhodopseudomonas palustris DX-1 10066324 YP_004110380.1 CDS Rpdx1_4092 NC_014834.1 4393883 4397041 D KEGG: bbt:BBta_p0061 RND family outer membrane copper/silver/drug transport protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump 4393883..4397041 Rhodopseudomonas palustris DX-1 10066325 YP_004110381.1 CDS Rpdx1_4093 NC_014834.1 4397165 4398427 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rec:RHECIAT_PC0000303 putative alcohol dehydrogenase protein; alcohol dehydrogenase GroES domain-containing protein 4397165..4398427 Rhodopseudomonas palustris DX-1 10066326 YP_004110382.1 CDS Rpdx1_4094 NC_014834.1 4398547 4399038 R PFAM: protein of unknown function DUF892; KEGG: bra:BRADO5518 hypothetical protein; hypothetical protein complement(4398547..4399038) Rhodopseudomonas palustris DX-1 10066327 YP_004110383.1 CDS Rpdx1_4095 NC_014834.1 4399123 4399731 R PFAM: isochorismatase hydrolase; KEGG: pde:Pden_1636 isochorismatase hydrolase; isochorismatase hydrolase complement(4399123..4399731) Rhodopseudomonas palustris DX-1 10066328 YP_004110384.1 CDS Rpdx1_4096 NC_014834.1 4399728 4400084 R KEGG: mes:Meso_0331 hypothetical protein; hypothetical protein complement(4399728..4400084) Rhodopseudomonas palustris DX-1 10066329 YP_004110385.1 CDS Rpdx1_4097 NC_014834.1 4400413 4401198 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_PC0000304 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(4400413..4401198) Rhodopseudomonas palustris DX-1 10066330 YP_004110386.1 CDS Rpdx1_4098 NC_014834.1 4401298 4402065 D PFAM: protein of unknown function DUF72; KEGG: bbt:BBta_4267 hypothetical protein; hypothetical protein 4401298..4402065 Rhodopseudomonas palustris DX-1 10066331 YP_004110387.1 CDS Rpdx1_4099 NC_014834.1 4402069 4402191 R hypothetical protein complement(4402069..4402191) Rhodopseudomonas palustris DX-1 10066332 YP_004110388.1 CDS Rpdx1_4100 NC_014834.1 4402403 4403278 D KEGG: mdi:METDI3542 putative manganese catalase; PFAM: manganese containing catalase; catalase 4402403..4403278 Rhodopseudomonas palustris DX-1 10066333 YP_004110389.1 CDS Rpdx1_4101 NC_014834.1 4403698 4404468 D KEGG: mpo:Mpop_2886 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; Crp/Fnr family transcriptional regulator 4403698..4404468 Rhodopseudomonas palustris DX-1 10066334 YP_004110390.1 CDS Rpdx1_4102 NC_014834.1 4404476 4405171 D PFAM: HWE histidine kinase; KEGG: mrd:Mrad2831_0197 putative signal transduction histidine kinase; signal transduction histidine kinase 4404476..4405171 Rhodopseudomonas palustris DX-1 10066335 YP_004110391.1 CDS Rpdx1_4103 NC_014834.1 4405280 4405477 D KEGG: ptr:459066 intersectin 2; hypothetical protein 4405280..4405477 Rhodopseudomonas palustris DX-1 10066336 YP_004110392.1 CDS Rpdx1_4104 NC_014834.1 4405767 4406135 D SMART: response regulator receiver; KEGG: mno:Mnod_6449 response regulator receiver protein; response regulator receiver 4405767..4406135 Rhodopseudomonas palustris DX-1 10066337 YP_004110393.1 CDS Rpdx1_4105 NC_014834.1 4406213 4407073 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nwi:Nwi_2662 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4406213..4407073 Rhodopseudomonas palustris DX-1 10066338 YP_004110394.1 CDS Rpdx1_4106 NC_014834.1 4407272 4407520 D PFAM: protein of unknown function DUF378; KEGG: bra:BRADO1751 hypothetical protein; hypothetical protein 4407272..4407520 Rhodopseudomonas palustris DX-1 10066339 YP_004110395.1 CDS Rpdx1_4107 NC_014834.1 4407520 4408185 D KEGG: bra:BRADO4332 hypothetical protein; hypothetical protein 4407520..4408185 Rhodopseudomonas palustris DX-1 10066340 YP_004110396.1 CDS Rpdx1_4108 NC_014834.1 4408182 4408553 D KEGG: bra:BRADO1771 putative signal peptide; hypothetical protein 4408182..4408553 Rhodopseudomonas palustris DX-1 10066341 YP_004110397.1 CDS Rpdx1_4109 NC_014834.1 4408694 4410145 R TIGRFAM: benzoyl-CoA oxygenase, B subunit; KEGG: bja:blr1081 benzoyl-CoA oxygenase component; benzoyl-CoA oxygenase subunit B complement(4408694..4410145) Rhodopseudomonas palustris DX-1 10066342 YP_004110398.1 CDS Rpdx1_4110 NC_014834.1 4410322 4412016 R KEGG: bja:blr1080 benzoyl-CoA-dihydrodiol lyase; TIGRFAM: benzoyl-CoA-dihydrodiol lyase; PFAM: Enoyl-CoA hydratase/isomerase; benzoyl-CoA-dihydrodiol lyase complement(4410322..4412016) Rhodopseudomonas palustris DX-1 10066343 YP_004110399.1 CDS Rpdx1_4111 NC_014834.1 4412145 4412966 R PFAM: alpha/beta hydrolase fold; KEGG: bja:blr1078 putative hydrolase; alpha/beta hydrolase fold protein complement(4412145..4412966) Rhodopseudomonas palustris DX-1 10066344 YP_004110400.1 CDS Rpdx1_4112 NC_014834.1 4412999 4414111 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sti:Sthe_2859 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(4412999..4414111) Rhodopseudomonas palustris DX-1 10066345 YP_004110401.1 CDS Rpdx1_4113 NC_014834.1 4414304 4415029 D KEGG: sil:SPOA0323 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 4414304..4415029 Rhodopseudomonas palustris DX-1 10066346 YP_004110402.1 CDS Rpdx1_4114 NC_014834.1 4415054 4416037 R KEGG: eba:ebA3602 4-hydroxybenzoyl-CoA reductase, beta subunit; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, beta subunit; PFAM: molybdopterin dehydrogenase FAD-binding; 4-hydroxybenzoyl-CoA reductase subunit beta complement(4415054..4416037) Rhodopseudomonas palustris DX-1 10066347 YP_004110403.1 CDS Rpdx1_4115 NC_014834.1 4416034 4418367 R KEGG: eba:ebA3603 4-hydroxybenzoyl-CoA reductase, alpha subunit; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, alpha subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; 4-hydroxybenzoyl-CoA reductase subunit alpha complement(4416034..4418367) Rhodopseudomonas palustris DX-1 10066348 YP_004110404.1 CDS Rpdx1_4116 NC_014834.1 4418364 4418855 R KEGG: eba:ebA3604 4-hydroxybenzoyl-CoA reductase, gamma subunit; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, gamma subunit; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; 4-hydroxybenzoyl-CoA reductase subunit gamma complement(4418364..4418855) Rhodopseudomonas palustris DX-1 10066349 YP_004110405.1 CDS Rpdx1_4117 NC_014834.1 4419021 4420640 D KEGG: bja:blr1077 acetyl-CoA synthetase; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; benzoate-CoA ligase family 4419021..4420640 Rhodopseudomonas palustris DX-1 10066350 YP_004110406.1 CDS Rpdx1_4118 NC_014834.1 4420815 4421993 D PFAM: Extracellular ligand-binding receptor; KEGG: lch:Lcho_3653 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4420815..4421993 Rhodopseudomonas palustris DX-1 10066351 YP_004110407.1 CDS Rpdx1_4119 NC_014834.1 4422075 4422935 D PFAM: inner-membrane translocator; KEGG: pna:Pnap_1906 inner-membrane translocator; inner-membrane translocator 4422075..4422935 Rhodopseudomonas palustris DX-1 10066352 YP_004110408.1 CDS Rpdx1_4120 NC_014834.1 4422938 4424725 D KEGG: xau:Xaut_2704 ABC transporter related; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; ABC transporter-like protein 4422938..4424725 Rhodopseudomonas palustris DX-1 10066353 YP_004110409.1 CDS Rpdx1_4121 NC_014834.1 4424722 4425444 D KEGG: mag:amb2870 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4424722..4425444 Rhodopseudomonas palustris DX-1 10066354 YP_004110410.1 CDS Rpdx1_4122 NC_014834.1 4425543 4426022 D PFAM: GCN5-related N-acetyltransferase; KEGG: gme:Gmet_2096 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4425543..4426022 Rhodopseudomonas palustris DX-1 10066355 YP_004110411.1 CDS Rpdx1_4123 NC_014834.1 4426084 4426548 D KEGG: mag:amb3391 transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 4426084..4426548 Rhodopseudomonas palustris DX-1 10066356 YP_004110412.1 CDS Rpdx1_4124 NC_014834.1 4426595 4426840 R KEGG: tmz:Tmz1t_2947 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(4426595..4426840) Rhodopseudomonas palustris DX-1 10066357 YP_004110413.1 CDS Rpdx1_4125 NC_014834.1 4426858 4428432 R KEGG: lch:Lcho_3655 benzoate-CoA ligase family; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; benzoate-CoA ligase family complement(4426858..4428432) Rhodopseudomonas palustris DX-1 10066358 YP_004110414.1 CDS Rpdx1_4126 NC_014834.1 4428546 4429379 R TIGRFAM: benzoyl-CoA reductase, subunit D; CoA-substrate-specific enzyme activase; KEGG: tmz:Tmz1t_2948 benzoyl-CoA reductase, subunit D; PFAM: ATPase BadF/BadG/BcrA/BcrD type; benzoyl-CoA reductase subunit D complement(4428546..4429379) Rhodopseudomonas palustris DX-1 10066359 YP_004110415.1 CDS Rpdx1_4127 NC_014834.1 4429433 4430746 R TIGRFAM: benzoyl-CoA reductase, subunit A; CoA-substrate-specific enzyme activase; KEGG: mag:amb2139 2-hydroxyglutaryl-CoA dehydratase activator protein; PFAM: ATPase BadF/BadG/BcrA/BcrD type; benzoyl-CoA reductase subunit A complement(4429433..4430746) Rhodopseudomonas palustris DX-1 10066360 YP_004110416.1 CDS Rpdx1_4128 NC_014834.1 4430758 4432068 R TIGRFAM: benzoyl-CoA reductase, subunit B; KEGG: tmz:Tmz1t_2950 benzoyl-CoA reductase, subunit B; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; benzoyl-CoA reductase subunit B complement(4430758..4432068) Rhodopseudomonas palustris DX-1 10066361 YP_004110417.1 CDS Rpdx1_4129 NC_014834.1 4432065 4433249 R TIGRFAM: benzoyl-CoA reductase, subunit C; KEGG: tmz:Tmz1t_2951 benzoyl-CoA reductase, subunit C; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; benzoyl-CoA reductase subunit C complement(4432065..4433249) Rhodopseudomonas palustris DX-1 10066362 YP_004110418.1 CDS Rpdx1_4130 NC_014834.1 4433422 4434441 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: lch:Lcho_2743 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(4433422..4434441) Rhodopseudomonas palustris DX-1 10066363 YP_004110419.1 CDS Rpdx1_4131 NC_014834.1 4434516 4435043 R manually curated; PFAM: regulatory protein MarR; KEGG: reu:Reut_B3914 MarR family transcriptional regulator; SMART: regulatory protein MarR; regulatory protein MarR complement(4434516..4435043) Rhodopseudomonas palustris DX-1 10066364 YP_004110420.1 CDS Rpdx1_4132 NC_014834.1 4435166 4435933 D KEGG: lch:Lcho_1185 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; TIGRFAM: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase 4435166..4435933 Rhodopseudomonas palustris DX-1 10066365 YP_004110421.1 CDS Rpdx1_4133 NC_014834.1 4435963 4436745 D KEGG: pna:Pnap_2124 naphthoate synthase; TIGRFAM: 2-ketocyclohexanecarboxyl-CoA hydrolase; PFAM: Enoyl-CoA hydratase/isomerase; 2-ketocyclohexanecarboxyl-CoA hydrolase 4435963..4436745 Rhodopseudomonas palustris DX-1 10066366 YP_004110422.1 CDS Rpdx1_4134 NC_014834.1 4436811 4437962 D KEGG: reu:Reut_B3917 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal; TIGRFAM: cyclohexanecarboxyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; cyclohexanecarboxyl-CoA dehydrogenase 4436811..4437962 Rhodopseudomonas palustris DX-1 10066367 YP_004110423.1 CDS Rpdx1_4135 NC_014834.1 4438020 4439663 D KEGG: lch:Lcho_1188 cyclohexanecarboxylate-CoA ligase; TIGRFAM: cyclohexanecarboxylate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; cyclohexanecarboxylate-CoA ligase 4438020..4439663 Rhodopseudomonas palustris DX-1 10066368 YP_004110424.1 CDS Rpdx1_4136 NC_014834.1 4439691 4440467 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: lch:Lcho_1190 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4439691..4440467 Rhodopseudomonas palustris DX-1 10066369 YP_004110425.1 CDS Rpdx1_4137 NC_014834.1 4440573 4441076 R PFAM: Hemolysin-type calcium-binding region; KEGG: met:M446_1696 metallophosphoesterase; hemolysin-type calcium-binding protein complement(4440573..4441076) Rhodopseudomonas palustris DX-1 10066370 YP_004110426.1 CDS Rpdx1_4138 NC_014834.1 4441057 4445712 R KEGG: amr:AM1_E0108 hypothetical protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: glycerophosphoryl diester phosphodiesterase; Hemolysin-type calcium-binding region; outer membrane adhesin-like protein complement(4441057..4445712) Rhodopseudomonas palustris DX-1 10066371 YP_004110427.1 CDS Rpdx1_4139 NC_014834.1 4445861 4446661 R manually curated; PFAM: regulatory protein DeoR; KEGG: dat:HRM2_41360 GlpR1; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(4445861..4446661) Rhodopseudomonas palustris DX-1 10066372 YP_004110428.1 CDS Rpdx1_4140 NC_014834.1 4447076 4455403 R PFAM: 5'-Nucleotidase domain protein; Endonuclease/exonuclease/phosphatase; Hemolysin-type calcium-binding region; KEGG: syp:SYNPCC7002_G0067 endonuclease/exonuclease/phosphatase family protein; 5'-nucleotidase domain-containing protein complement(4447076..4455403) Rhodopseudomonas palustris DX-1 10066373 YP_004110429.1 CDS Rpdx1_4141 NC_014834.1 4455914 4457692 D TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; KEGG: met:M446_3382 type I secretion system ATPase; SMART: AAA ATPase; type I secretion system ATPase 4455914..4457692 Rhodopseudomonas palustris DX-1 10066374 YP_004110430.1 CDS Rpdx1_4142 NC_014834.1 4457703 4459025 D KEGG: met:M446_3383 HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; HlyD family type I secretion membrane fusion protein 4457703..4459025 Rhodopseudomonas palustris DX-1 10066375 YP_004110431.1 CDS Rpdx1_4143 NC_014834.1 4459057 4460133 R KEGG: bbt:BBta_0545 putative nuclease-like protein; PFAM: Rare lipoprotein A; nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); Rare lipoprotein A complement(4459057..4460133) Rhodopseudomonas palustris DX-1 10066376 YP_004110432.1 CDS Rpdx1_4144 NC_014834.1 4460839 4461144 R KEGG: bra:BRADO5892 putative signal peptide; hypothetical protein complement(4460839..4461144) Rhodopseudomonas palustris DX-1 10066378 YP_004110433.1 CDS Rpdx1_4145 NC_014834.1 4461221 4461859 R KEGG: bra:BRADO5893 putative N-methyltransferase; putative phosphatidylethanolamine or menaquinone biosynthesis methyltransferase (UbiE); PFAM: Methyltransferase type 11; phosphatidylethanolamine N-methyltransferase complement(4461221..4461859) Rhodopseudomonas palustris DX-1 10066379 YP_004110434.1 CDS Rpdx1_4146 NC_014834.1 4461879 4463084 R TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: nwi:Nwi_0603 tRNA-specific 2-thiouridylase MnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase complement(4461879..4463084) Rhodopseudomonas palustris DX-1 10066380 YP_004110435.1 CDS Rpdx1_4147 NC_014834.1 4463386 4464975 D PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: bja:blr6996 hypothetical protein; flagellar hook-length control protein-like, C-terminal domain 4463386..4464975 Rhodopseudomonas palustris DX-1 10066381 YP_004110436.1 CDS Rpdx1_4148 NC_014834.1 4464988 4465707 D PFAM: flagellar hook capping protein; KEGG: nha:Nham_0693 flagellar hook capping protein; flagellar hook capping protein 4464988..4465707 Rhodopseudomonas palustris DX-1 10066382 YP_004110437.1 CDS Rpdx1_4149 NC_014834.1 4465745 4466563 R TIGRFAM: lytic murein transglycosylase; KEGG: nha:Nham_2862 lytic murein transglycosylase; lytic murein transglycosylase complement(4465745..4466563) Rhodopseudomonas palustris DX-1 10066383 YP_004110438.1 CDS Rpdx1_4150 NC_014834.1 4466796 4467167 D KEGG: bra:BRADO1363 hypothetical protein; hypothetical protein 4466796..4467167 Rhodopseudomonas palustris DX-1 10066384 YP_004110439.1 CDS Rpdx1_4151 NC_014834.1 4467355 4467918 R KEGG: bbt:BBta_4318 putative intracellular proteinase; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; intracellular protease complement(4467355..4467918) Rhodopseudomonas palustris DX-1 10066385 YP_004110440.1 CDS Rpdx1_4152 NC_014834.1 4468154 4468495 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: cti:RALTA_A1510 conserved hypothetical protein, RmlC-like cupin domain; cupin complement(4468154..4468495) Rhodopseudomonas palustris DX-1 10066386 YP_004110441.1 CDS Rpdx1_4153 NC_014834.1 4468793 4469908 D KEGG: ccs:CCNA_01509 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; beta-ketoacyl-acyl-carrier-protein synthase I 4468793..4469908 Rhodopseudomonas palustris DX-1 10066387 YP_004110442.1 CDS Rpdx1_4154 NC_014834.1 4470102 4470953 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_2588 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4470102..4470953 Rhodopseudomonas palustris DX-1 10066388 YP_004110443.1 CDS Rpdx1_4155 NC_014834.1 4471204 4472967 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: tmz:Tmz1t_2273 diguanylate cyclase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; diguanylate cyclase complement(4471204..4472967) Rhodopseudomonas palustris DX-1 10066389 YP_004110444.1 CDS Rpdx1_4156 NC_014834.1 4473195 4474286 R KEGG: mpo:Mpop_4695 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase complement(4473195..4474286) Rhodopseudomonas palustris DX-1 10066390 YP_004110445.1 CDS Rpdx1_4158 NC_014834.1 4476353 4476676 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: neu:NE1365 helix-hairpin-helix DNA-binding motif-containing protein; SMART: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 4476353..4476676 Rhodopseudomonas palustris DX-1 10066392 YP_004110446.1 CDS Rpdx1_4159 NC_014834.1 4476786 4476983 R PFAM: YcfA family protein; KEGG: mrb:Mrub_0742 YcfA family protein; hypothetical protein complement(4476786..4476983) Rhodopseudomonas palustris DX-1 10066393 YP_004110447.1 CDS Rpdx1_4160 NC_014834.1 4476983 4477216 R PFAM: Domain of unknown function DUF1902; KEGG: ttj:TTHA1013 hypothetical protein; hypothetical protein complement(4476983..4477216) Rhodopseudomonas palustris DX-1 10066394 YP_004110448.1 CDS Rpdx1_4161 NC_014834.1 4477333 4479429 R KEGG: bbt:BBta_6775 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RpoD subfamily RNA polymerase sigma 70 subunit complement(4477333..4479429) Rhodopseudomonas palustris DX-1 10066395 YP_004110449.1 CDS Rpdx1_4162 NC_014834.1 4479689 4481695 R TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase, DnaB-helicase binding domain; KEGG: bja:bll7350 DNA primase; SMART: Toprim sub domain protein; zinc finger CHC2-family protein; DNA primase complement(4479689..4481695) Rhodopseudomonas palustris DX-1 10066396 YP_004110450.1 CDS Rpdx1_4163 NC_014834.1 4482163 4482405 D KEGG: mgr:MGG_04377 hypothetical protein; hypothetical protein 4482163..4482405 Rhodopseudomonas palustris DX-1 10066397 YP_004110451.1 CDS Rpdx1_4164 NC_014834.1 4482427 4482831 R PFAM: AIG2 family protein; KEGG: bja:bll7352 hypothetical protein; AIG2 family protein complement(4482427..4482831) Rhodopseudomonas palustris DX-1 10066398 YP_004110452.1 CDS Rpdx1_4165 NC_014834.1 4482998 4483795 D PFAM: N-formylglutamate amidohydrolase; KEGG: bbt:BBta_6779 hypothetical protein; N-formylglutamate amidohydrolase 4482998..4483795 Rhodopseudomonas palustris DX-1 10066399 YP_004110453.1 CDS Rpdx1_4166 NC_014834.1 4483922 4484539 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bja:bll7356 putative efflux protein; lysine exporter protein LysE/YggA complement(4483922..4484539) Rhodopseudomonas palustris DX-1 10066400 YP_004110454.1 CDS Rpdx1_4167 NC_014834.1 4484729 4485577 R PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: bja:bll7362 hypothetical protein; hypothetical protein complement(4484729..4485577) Rhodopseudomonas palustris DX-1 10066401 YP_004110455.1 CDS Rpdx1_4168 NC_014834.1 4486180 4486635 R PFAM: Protein of unknown function; KEGG: nha:Nham_2870 hypothetical protein; hypothetical protein complement(4486180..4486635) Rhodopseudomonas palustris DX-1 10066402 YP_004110456.1 CDS Rpdx1_4169 NC_014834.1 4486794 4487498 R PFAM: alpha/beta hydrolase fold; KEGG: bja:bll7370 hydrolase; alpha/beta hydrolase fold protein complement(4486794..4487498) Rhodopseudomonas palustris DX-1 10066403 YP_004110457.1 CDS Rpdx1_4170 NC_014834.1 4487647 4488840 D KEGG: bja:blr7371 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; carbamoyl-phosphate synthase small subunit 4487647..4488840 Rhodopseudomonas palustris DX-1 10066404 YP_004110458.1 CDS Rpdx1_4171 NC_014834.1 4489037 4489549 D PFAM: thioesterase superfamily protein; KEGG: bja:bll1207 hypothetical protein; thioesterase superfamily protein 4489037..4489549 Rhodopseudomonas palustris DX-1 10066405 YP_004110459.1 CDS Rpdx1_4172 NC_014834.1 4489591 4490115 D KEGG: bra:BRADO1333 hypothetical protein; hypothetical protein 4489591..4490115 Rhodopseudomonas palustris DX-1 10066406 YP_004110460.1 CDS Rpdx1_4173 NC_014834.1 4490203 4490730 R PFAM: Ferritin Dps family protein; KEGG: bra:BRADO1329 putative DNA-binding stress protein (oxydative damage protectant); ferritin Dps family protein complement(4490203..4490730) Rhodopseudomonas palustris DX-1 10066407 YP_004110461.1 CDS Rpdx1_4174 NC_014834.1 4491008 4491703 D PFAM: Methyltransferase type 12; KEGG: bbt:BBta_6798 putative S-adenosyl-L-methionine-dependent methyltransferase; type 12 methyltransferase 4491008..4491703 Rhodopseudomonas palustris DX-1 10066408 YP_004110462.1 CDS Rpdx1_4175 NC_014834.1 4491770 4492879 R KEGG: nha:Nham_0686 exodeoxyribonuclease V; exodeoxyribonuclease V complement(4491770..4492879) Rhodopseudomonas palustris DX-1 10066409 YP_004110463.1 CDS Rpdx1_4176 NC_014834.1 4492955 4493785 R KEGG: bja:bll5557 hypothetical protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; transglutaminase domain-containing protein complement(4492955..4493785) Rhodopseudomonas palustris DX-1 10066410 YP_004110464.1 CDS Rpdx1_4178 NC_014834.1 4494324 4494602 D PFAM: protein of unknown function DUF1488; KEGG: bja:bsl0168 hypothetical protein; hypothetical protein 4494324..4494602 Rhodopseudomonas palustris DX-1 10066412 YP_004110465.1 CDS Rpdx1_4179 NC_014834.1 4494660 4494815 D KEGG: bbt:BBta_1870 hypothetical protein; hypothetical protein 4494660..4494815 Rhodopseudomonas palustris DX-1 10066413 YP_004110466.1 CDS Rpdx1_4180 NC_014834.1 4495223 4496602 R KEGG: nha:Nham_0687 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: AAA ATPase; response regulator receiver; Fis family two component sigma54 specific transcriptional regulator complement(4495223..4496602) Rhodopseudomonas palustris DX-1 10066414 YP_004110467.1 CDS Rpdx1_4181 NC_014834.1 4496649 4496996 R KEGG: nwi:Nwi_0596 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliN complement(4496649..4496996) Rhodopseudomonas palustris DX-1 10066415 YP_004110468.1 CDS Rpdx1_4182 NC_014834.1 4497015 4497641 R KEGG: bja:blr7001 flagellar assembly protein H; flagellar assembly protein H complement(4497015..4497641) Rhodopseudomonas palustris DX-1 10066416 YP_004110469.1 CDS Rpdx1_4183 NC_014834.1 4497641 4498729 R KEGG: nha:Nham_0690 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(4497641..4498729) Rhodopseudomonas palustris DX-1 10066417 YP_004110470.1 CDS Rpdx1_4184 NC_014834.1 4498736 4500349 R KEGG: nha:Nham_0691 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; flagellar M-ring protein FliF complement(4498736..4500349) Rhodopseudomonas palustris DX-1 10066418 YP_004110471.1 CDS Rpdx1_4185 NC_014834.1 4500550 4500825 R PFAM: protein of unknown function DUF1153; KEGG: oca:OCAR_5210 flag1; hypothetical protein complement(4500550..4500825) Rhodopseudomonas palustris DX-1 10066419 YP_004110472.1 CDS Rpdx1_4186 NC_014834.1 4501043 4501510 D KEGG: bja:blr7780 hypothetical protein; hypothetical protein 4501043..4501510 Rhodopseudomonas palustris DX-1 10066420 YP_004110473.1 CDS Rpdx1_4187 NC_014834.1 4501482 4503077 R PFAM: FAD linked oxidase domain protein; KEGG: cwo:Cwoe_1045 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein complement(4501482..4503077) Rhodopseudomonas palustris DX-1 10066421 YP_004110474.1 CDS Rpdx1_4188 NC_014834.1 4503174 4504079 R PFAM: UspA domain protein; KEGG: oca:OCAR_5193 universal stress protein; UspA domain-containing protein complement(4503174..4504079) Rhodopseudomonas palustris DX-1 10066422 YP_004110475.1 CDS Rpdx1_4189 NC_014834.1 4504129 4506873 R KEGG: pde:Pden_5102 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; HAD superfamily P-type ATPase complement(4504129..4506873) Rhodopseudomonas palustris DX-1 10066423 YP_004110476.1 CDS Rpdx1_4190 NC_014834.1 4507132 4507464 R KEGG: cnb:CNBF0590 hypothetical protein; hypothetical protein complement(4507132..4507464) Rhodopseudomonas palustris DX-1 10066424 YP_004110477.1 CDS Rpdx1_4191 NC_014834.1 4507737 4508534 D KEGG: cobalamin 5'-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase 4507737..4508534 Rhodopseudomonas palustris DX-1 10066425 YP_004110478.1 CDS Rpdx1_4192 NC_014834.1 4508686 4509030 R KEGG: bbt:BBta_0660 putative formamidase regulatory protein FmdB; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; FmdB family regulatory protein complement(4508686..4509030) Rhodopseudomonas palustris DX-1 10066426 YP_004110479.1 CDS Rpdx1_4193 NC_014834.1 4509270 4510499 R KEGG: bbt:BBta_0659 formamidase (formamide amidohydrolase); PFAM: Acetamidase/Formamidase; formamidase complement(4509270..4510499) Rhodopseudomonas palustris DX-1 10066427 YP_004110480.1 CDS Rpdx1_4194 NC_014834.1 4510536 4511225 R TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: bbt:BBta_0658 putative branched-chain amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE complement(4510536..4511225) Rhodopseudomonas palustris DX-1 10066428 YP_004110481.1 CDS Rpdx1_4195 NC_014834.1 4511237 4511992 R KEGG: bja:blr0970 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; urea ABC transporter ATP-binding protein UrtD complement(4511237..4511992) Rhodopseudomonas palustris DX-1 10066429 YP_004110482.1 CDS Rpdx1_4196 NC_014834.1 4512003 4513154 R KEGG: bja:blr0969 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; urea ABC transporter permease UrtC complement(4512003..4513154) Rhodopseudomonas palustris DX-1 10066430 YP_004110483.1 CDS Rpdx1_4197 NC_014834.1 4513170 4514096 R KEGG: bja:blr0968 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; urea ABC transporter permease UrtB complement(4513170..4514096) Rhodopseudomonas palustris DX-1 10066431 YP_004110484.1 CDS Rpdx1_4198 NC_014834.1 4514295 4515557 R TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bra:BRADO6897 branched chain amino-acid ABC transporter substrate-binding protein; urea ABC transporter urea-binding protein complement(4514295..4515557) Rhodopseudomonas palustris DX-1 10066432 YP_004110485.1 CDS Rpdx1_4199 NC_014834.1 4515813 4519181 D KEGG: bja:bll0966 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; integral membrane sensor hybrid histidine kinase 4515813..4519181 Rhodopseudomonas palustris DX-1 10066433 YP_004110486.1 CDS Rpdx1_4200 NC_014834.1 4519171 4520100 D KEGG: bra:BRADO6899 CheY/LuxR family two-component transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family two component transcriptional regulator 4519171..4520100 Rhodopseudomonas palustris DX-1 10066434 YP_004110487.1 CDS Rpdx1_4201 NC_014834.1 4520127 4521086 R manually curated; TIGRFAM: ribonuclease BN; KEGG: bja:blr7476 hypothetical protein; PFAM: ribonuclease BN; ribonuclease BN complement(4520127..4521086) Rhodopseudomonas palustris DX-1 10066435 YP_004110488.1 CDS Rpdx1_4202 NC_014834.1 4521277 4521990 R KEGG: noc:Noc_1592 hypothetical protein; hypothetical protein complement(4521277..4521990) Rhodopseudomonas palustris DX-1 10066436 YP_004110489.1 CDS Rpdx1_4203 NC_014834.1 4521987 4522379 R KEGG: nha:Nham_3878 hypothetical protein; hypothetical protein complement(4521987..4522379) Rhodopseudomonas palustris DX-1 10066437 YP_004110490.1 CDS Rpdx1_4204 NC_014834.1 4522363 4522965 R KEGG: nha:Nham_3877 hypothetical protein; hypothetical protein complement(4522363..4522965) Rhodopseudomonas palustris DX-1 10066438 YP_004110491.1 CDS Rpdx1_4205 NC_014834.1 4522981 4524147 R KEGG: nha:Nham_3876 hypothetical protein; hypothetical protein complement(4522981..4524147) Rhodopseudomonas palustris DX-1 10066439 YP_004110492.1 CDS Rpdx1_4206 NC_014834.1 4524474 4525982 D PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_5258 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4524474..4525982 Rhodopseudomonas palustris DX-1 10066440 YP_004110493.1 CDS Rpdx1_4207 NC_014834.1 4526002 4526832 R TIGRFAM: TonB family protein; KEGG: bja:bll7071 TonB protein; TonB family protein complement(4526002..4526832) Rhodopseudomonas palustris DX-1 10066441 YP_004110494.1 CDS Rpdx1_4208 NC_014834.1 4526829 4527266 R KEGG: bja:bll7072 biopolymer transport protein; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TonB system transport protein ExbD complement(4526829..4527266) Rhodopseudomonas palustris DX-1 10066442 YP_004110495.1 CDS Rpdx1_4209 NC_014834.1 4527271 4528071 R KEGG: bja:bll7073 biopolymer transport protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB complement(4527271..4528071) Rhodopseudomonas palustris DX-1 10066443 YP_004110496.1 CDS Rpdx1_4210 NC_014834.1 4528397 4529245 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr7268 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4528397..4529245 Rhodopseudomonas palustris DX-1 10066444 YP_004110497.1 CDS Rpdx1_4211 NC_014834.1 4529249 4530385 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr7269 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4529249..4530385 Rhodopseudomonas palustris DX-1 10066445 YP_004110498.1 CDS Rpdx1_4212 NC_014834.1 4530404 4531600 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr7270 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4530404..4531600 Rhodopseudomonas palustris DX-1 10066446 YP_004110499.1 CDS Rpdx1_4213 NC_014834.1 4531847 4533181 R KEGG: mag:amb1245 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase and ligase; phenylacetate--CoA ligase complement(4531847..4533181) Rhodopseudomonas palustris DX-1 10066447 YP_004110500.1 CDS Rpdx1_4214 NC_014834.1 4533205 4533765 R PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: ddf:DEFDS_0925 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; pyruvate/ketoisovalerate oxidoreductase catalytic subunit complement(4533205..4533765) Rhodopseudomonas palustris DX-1 10066448 YP_004110501.1 CDS Rpdx1_4215 NC_014834.1 4533780 4534610 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dap:Dacet_2341 thiamine pyrophosphate protein domain protein TPP-binding protein; thiamine pyrophosphate domain-containing TPP-binding protein complement(4533780..4534610) Rhodopseudomonas palustris DX-1 10066449 YP_004110502.1 CDS Rpdx1_4216 NC_014834.1 4534612 4535775 R PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: pth:PTH_0847 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(4534612..4535775) Rhodopseudomonas palustris DX-1 10066450 YP_004110503.1 CDS Rpdx1_4217 NC_014834.1 4535772 4536716 R KEGG: swo:Swol_1195 indolepyruvate oxidoreductase subunit beta; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Indolepyruvate ferredoxin oxidoreductase complement(4535772..4536716) Rhodopseudomonas palustris DX-1 10066451 YP_004110504.1 CDS Rpdx1_4219 NC_014834.1 4537019 4537819 D KEGG: bja:blr3164 hypothetical protein; hypothetical protein 4537019..4537819 Rhodopseudomonas palustris DX-1 10066453 YP_004110505.1 CDS Rpdx1_4220 NC_014834.1 4538009 4538884 R PFAM: Mammalian cell entry related domain protein; KEGG: bja:bll5892 hypothetical protein; mammalian cell entry related domain-containing protein complement(4538009..4538884) Rhodopseudomonas palustris DX-1 10066454 YP_004110506.1 CDS Rpdx1_4221 NC_014834.1 4539022 4539795 R KEGG: bra:BRADO5085 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4539022..4539795) Rhodopseudomonas palustris DX-1 10066455 YP_004110507.1 CDS Rpdx1_4222 NC_014834.1 4539798 4540949 R PFAM: protein of unknown function DUF140; KEGG: nha:Nham_1315 hypothetical protein; hypothetical protein complement(4539798..4540949) Rhodopseudomonas palustris DX-1 10066456 YP_004110508.1 CDS Rpdx1_4223 NC_014834.1 4541054 4542049 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: nha:Nham_1314 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 4541054..4542049 Rhodopseudomonas palustris DX-1 10066457 YP_004110509.1 CDS Rpdx1_4224 NC_014834.1 4542019 4543227 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll5896 putative 3-phenylpropionic acid transporter; major facilitator superfamily protein complement(4542019..4543227) Rhodopseudomonas palustris DX-1 10066458 YP_004110510.1 CDS Rpdx1_4225 NC_014834.1 4543303 4544844 D KEGG: bra:BRADO5089 hypothetical protein; hypothetical protein 4543303..4544844 Rhodopseudomonas palustris DX-1 10066459 YP_004110511.1 CDS Rpdx1_4226 NC_014834.1 4544892 4545887 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bra:BRADO5091 putative threonine dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta complement(4544892..4545887) Rhodopseudomonas palustris DX-1 10066460 YP_004110512.1 CDS Rpdx1_4227 NC_014834.1 4545935 4546990 R PFAM: glycosyl transferase group 1; KEGG: oca:OCAR_5346 glycosyl transferase, group 1; glycosyl transferase group 1 protein complement(4545935..4546990) Rhodopseudomonas palustris DX-1 10066461 YP_004110513.1 CDS Rpdx1_4228 NC_014834.1 4546990 4547787 R PFAM: metallophosphoesterase; KEGG: nha:Nham_1311 metallophosphoesterase; metallophosphoesterase complement(4546990..4547787) Rhodopseudomonas palustris DX-1 10066462 YP_004110514.1 CDS Rpdx1_4229 NC_014834.1 4547841 4548497 R KEGG: oca:OCAR_5344 phosphatidylethanolamine N-methyltransferase; PFAM: Methyltransferase type 11; phosphatidylethanolamine N-methyltransferase complement(4547841..4548497) Rhodopseudomonas palustris DX-1 10066463 YP_004110515.1 CDS Rpdx1_4230 NC_014834.1 4548590 4549390 R TIGRFAM: phosphomethylpyrimidine kinase; KEGG: bja:bll5905 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase complement(4548590..4549390) Rhodopseudomonas palustris DX-1 10066464 YP_004110516.1 CDS Rpdx1_4231 NC_014834.1 4549530 4549775 D PFAM: Transcription regulator AsnC-type-like; KEGG: nha:Nham_1309 AsnC family transcriptional regulator; transcriptional regulator AsnC-type-like protein 4549530..4549775 Rhodopseudomonas palustris DX-1 10066465 YP_004110517.1 CDS Rpdx1_4232 NC_014834.1 4549783 4550712 R KEGG: bbt:BBta_5605 diheme cytochrome c-type; gluconate 2-dehydrogenase complement(4549783..4550712) Rhodopseudomonas palustris DX-1 10066466 YP_004110518.1 CDS Rpdx1_4233 NC_014834.1 4550746 4551195 R PFAM: cytochrome c class II; KEGG: bbt:BBta_5606 cytochrome c, class II; cytochrome c class II complement(4550746..4551195) Rhodopseudomonas palustris DX-1 10066467 YP_004110519.1 CDS Rpdx1_4234 NC_014834.1 4551308 4553629 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bra:BRADO5140 putative aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit complement(4551308..4553629) Rhodopseudomonas palustris DX-1 10066468 YP_004110520.1 CDS Rpdx1_4235 NC_014834.1 4553911 4554198 R KEGG: nha:Nham_2128 hypothetical protein; hypothetical protein complement(4553911..4554198) Rhodopseudomonas palustris DX-1 10066469 YP_004110521.1 CDS Rpdx1_4236 NC_014834.1 4554626 4556431 D PFAM: Carbamoyltransferase; KEGG: nha:Nham_2127 carbamoyltransferase; carbamoyltransferase 4554626..4556431 Rhodopseudomonas palustris DX-1 10066470 YP_004110522.1 CDS Rpdx1_4237 NC_014834.1 4556432 4557961 R KEGG: bbt:BBta_5611 putative virulence factor MviN-like protein; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN complement(4556432..4557961) Rhodopseudomonas palustris DX-1 10066471 YP_004110523.1 CDS Rpdx1_4238 NC_014834.1 4558155 4559306 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bbt:BBta_5614 putative aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(4558155..4559306) Rhodopseudomonas palustris DX-1 10066472 YP_004110524.1 CDS Rpdx1_4239 NC_014834.1 4559363 4560361 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bja:bll5918 putative dehydrogenase; oxidoreductase domain-containing protein complement(4559363..4560361) Rhodopseudomonas palustris DX-1 10066473 YP_004110525.1 CDS Rpdx1_4240 NC_014834.1 4560502 4561485 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: bja:bll5920 UDP-glucuronic acid epimerase; NAD-dependent epimerase/dehydratase complement(4560502..4561485) Rhodopseudomonas palustris DX-1 10066474 YP_004110526.1 CDS Rpdx1_4241 NC_014834.1 4561675 4562634 D KEGG: bja:blr5921 hypothetical protein; hypothetical protein 4561675..4562634 Rhodopseudomonas palustris DX-1 10066475 YP_004110527.1 CDS Rpdx1_4242 NC_014834.1 4562689 4563702 D PFAM: Glycosyl transferase, family 4, conserved region; KEGG: bbt:BBta_5665 putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase; glycosyl transferase family protein 4562689..4563702 Rhodopseudomonas palustris DX-1 10066476 YP_004110528.1 CDS Rpdx1_4243 NC_014834.1 4563707 4565647 R PFAM: polysaccharide biosynthesis protein CapD; KEGG: bja:bll5925 putative capsular polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD complement(4563707..4565647) Rhodopseudomonas palustris DX-1 10066477 YP_004110529.1 CDS Rpdx1_4244 NC_014834.1 4565685 4567157 R KEGG: bbt:BBta_5668 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; rfaE bifunctional protein complement(4565685..4567157) Rhodopseudomonas palustris DX-1 10066478 YP_004110530.1 CDS Rpdx1_4245 NC_014834.1 4567182 4568162 R KEGG: bja:bll5928 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; ADP-L-glycero-D-manno-heptose-6-epimerase complement(4567182..4568162) Rhodopseudomonas palustris DX-1 10066479 YP_004110531.1 CDS Rpdx1_4246 NC_014834.1 4568348 4569424 D KEGG: bra:BRADO5203 ADP-heptose--LPS heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase II 4568348..4569424 Rhodopseudomonas palustris DX-1 10066480 YP_004110532.1 CDS Rpdx1_4247 NC_014834.1 4569495 4570082 D PFAM: sugar isomerase (SIS); KEGG: bbt:BBta_5671 phosphoheptose isomerase; sugar isomerase 4569495..4570082 Rhodopseudomonas palustris DX-1 10066481 YP_004110533.1 CDS Rpdx1_4248 NC_014834.1 4570079 4570621 D KEGG: oca:OCAR_5331 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; histidinol-phosphate phosphatase family protein 4570079..4570621 Rhodopseudomonas palustris DX-1 10066482 YP_004110534.1 CDS Rpdx1_4249 NC_014834.1 4570618 4571562 R KEGG: nha:Nham_1294 lipopolysaccharide heptosyltransferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase I complement(4570618..4571562) Rhodopseudomonas palustris DX-1 10066483 YP_004110535.1 CDS Rpdx1_4250 NC_014834.1 4571745 4572758 D KEGG: bja:blr5931 UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 4571745..4572758 Rhodopseudomonas palustris DX-1 10066484 YP_004110536.1 CDS Rpdx1_4251 NC_014834.1 4572880 4574682 D KEGG: nha:Nham_1292 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein 4572880..4574682 Rhodopseudomonas palustris DX-1 10066485 YP_004110537.1 CDS Rpdx1_4252 NC_014834.1 4574741 4575442 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bja:blr5933 hypothetical protein; fumarylacetoacetate (FAA) hydrolase 4574741..4575442 Rhodopseudomonas palustris DX-1 10066486 YP_004110538.1 CDS Rpdx1_4253 NC_014834.1 4575522 4575659 D hypothetical protein 4575522..4575659 Rhodopseudomonas palustris DX-1 10066487 YP_004110539.1 CDS Rpdx1_4254 NC_014834.1 4575661 4576515 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: nha:Nham_2798 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4575661..4576515) Rhodopseudomonas palustris DX-1 10066488 YP_004110540.1 CDS Rpdx1_4255 NC_014834.1 4576835 4582789 D KEGG: nwi:Nwi_0909 putative DNA helicase; putative DNA helicase 4576835..4582789 Rhodopseudomonas palustris DX-1 10066489 YP_004110541.1 CDS Rpdx1_4256 NC_014834.1 4582758 4583837 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dar:Daro_2825 PAS:GGDEF; SMART: GGDEF domain containing protein; diguanylate cyclase complement(4582758..4583837) Rhodopseudomonas palustris DX-1 10066490 YP_004110542.1 CDS Rpdx1_4257 NC_014834.1 4584135 4586240 D KEGG: bbt:BBta_4919 putative DEAD-box cold-shock protein, ATP-independent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 4584135..4586240 Rhodopseudomonas palustris DX-1 10066491 YP_004110543.1 CDS Rpdx1_4258 NC_014834.1 4586346 4587617 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll2940 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(4586346..4587617) Rhodopseudomonas palustris DX-1 10066492 YP_004110544.1 CDS Rpdx1_4259 NC_014834.1 4587958 4588509 D KEGG: mes:Meso_0938 hypothetical protein; hypothetical protein 4587958..4588509 Rhodopseudomonas palustris DX-1 10066493 YP_004110545.1 CDS Rpdx1_4260 NC_014834.1 4588684 4589064 D PFAM: Secreted repeat of unknown function; KEGG: oca:OCAR_6987 secreted repeat protein; hypothetical protein 4588684..4589064 Rhodopseudomonas palustris DX-1 10066494 YP_004110546.1 CDS Rpdx1_4261 NC_014834.1 4589080 4589589 D KEGG: mea:Mex_1p1232 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; ECF subfamily RNA polymerase sigma-24 subunit 4589080..4589589 Rhodopseudomonas palustris DX-1 10066495 YP_004110547.1 CDS Rpdx1_4262 NC_014834.1 4589586 4590368 D KEGG: mch:Mchl_5734 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor 4589586..4590368 Rhodopseudomonas palustris DX-1 10066496 YP_004110548.1 CDS Rpdx1_4263 NC_014834.1 4590395 4591267 R PFAM: ABC-3 protein; KEGG: spe:Spro_2130 ABC-3 protein; ABC-3 protein complement(4590395..4591267) Rhodopseudomonas palustris DX-1 10066497 YP_004110549.1 CDS Rpdx1_4264 NC_014834.1 4591264 4592139 R PFAM: ABC-3 protein; KEGG: rhi:NGR_c31040 putative iron transmembrane ABC transporter component; ABC-3 protein complement(4591264..4592139) Rhodopseudomonas palustris DX-1 10066498 YP_004110550.1 CDS Rpdx1_4265 NC_014834.1 4592141 4593037 R KEGG: spe:Spro_2132 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4592141..4593037) Rhodopseudomonas palustris DX-1 10066499 YP_004110551.1 CDS Rpdx1_4266 NC_014834.1 4593034 4593951 R PFAM: periplasmic solute binding protein; KEGG: hit:NTHI0481 putative periplasmic chelated iron binding protein; periplasmic solute-binding protein complement(4593034..4593951) Rhodopseudomonas palustris DX-1 10066500 YP_004110552.1 CDS Rpdx1_4267 NC_014834.1 4594012 4594956 R KEGG: bra:BRADO1425 putative signal peptide; hypothetical protein complement(4594012..4594956) Rhodopseudomonas palustris DX-1 10066501 YP_004110553.1 CDS Rpdx1_4268 NC_014834.1 4595233 4595697 D KEGG: bbt:BBta_1555 manganese transport regulator MntR; PFAM: iron dependent repressor; SMART: iron dependent repressor; iron (metal) dependent repressor 4595233..4595697 Rhodopseudomonas palustris DX-1 10066502 YP_004110554.1 CDS Rpdx1_4269 NC_014834.1 4596089 4596226 D KEGG: bbt:BBta_7669 hypothetical protein; hypothetical protein 4596089..4596226 Rhodopseudomonas palustris DX-1 10066503 YP_004110555.1 CDS Rpdx1_4270 NC_014834.1 4596604 4596990 D KEGG: xau:Xaut_0925 hypothetical protein; hypothetical protein 4596604..4596990 Rhodopseudomonas palustris DX-1 10066504 YP_004110556.1 CDS Rpdx1_4271 NC_014834.1 4597195 4598052 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0510 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4597195..4598052) Rhodopseudomonas palustris DX-1 10066505 YP_004110557.1 CDS Rpdx1_4272 NC_014834.1 4598153 4598530 D PFAM: 4-oxalocrotonate tautomerase; KEGG: bja:blr7299 hypothetical protein; 4-oxalocrotonate tautomerase 4598153..4598530 Rhodopseudomonas palustris DX-1 10066506 YP_004110558.1 CDS Rpdx1_4273 NC_014834.1 4598598 4598738 D KEGG: rhi:NGR_b02650 hypothetical protein; hypothetical protein 4598598..4598738 Rhodopseudomonas palustris DX-1 10066507 YP_004110559.1 CDS Rpdx1_4274 NC_014834.1 4598952 4600361 R TIGRFAM: adenosylhomocysteinase; KEGG: oca:OCAR_5321 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; adenosylhomocysteinase complement(4598952..4600361) Rhodopseudomonas palustris DX-1 10066508 YP_004110560.1 CDS Rpdx1_4275 NC_014834.1 4600622 4601818 R TIGRFAM: S-adenosylmethionine synthetase; KEGG: bbt:BBta_5699 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase complement(4600622..4601818) Rhodopseudomonas palustris DX-1 10066509 YP_004110561.1 CDS Rpdx1_4276 NC_014834.1 4601883 4603235 R manually curated; KEGG: bra:BRADO5240 hypothetical protein; hypothetical protein complement(4601883..4603235) Rhodopseudomonas palustris DX-1 10066510 YP_004110562.1 CDS Rpdx1_4277 NC_014834.1 4603441 4604751 D TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bja:bll8129 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 4603441..4604751 Rhodopseudomonas palustris DX-1 10066511 YP_004110563.1 CDS Rpdx1_4278 NC_014834.1 4605021 4606202 D PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_0893 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4605021..4606202 Rhodopseudomonas palustris DX-1 10066512 YP_004110564.1 CDS Rpdx1_4279 NC_014834.1 4606370 4607242 D PFAM: inner-membrane translocator; KEGG: xau:Xaut_0892 inner-membrane translocator; inner-membrane translocator 4606370..4607242 Rhodopseudomonas palustris DX-1 10066513 YP_004110565.1 CDS Rpdx1_4280 NC_014834.1 4607246 4608190 D PFAM: inner-membrane translocator; KEGG: xau:Xaut_0891 inner-membrane translocator; inner-membrane translocator 4607246..4608190 Rhodopseudomonas palustris DX-1 10066514 YP_004110566.1 CDS Rpdx1_4281 NC_014834.1 4608187 4608969 D KEGG: xau:Xaut_0890 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4608187..4608969 Rhodopseudomonas palustris DX-1 10066515 YP_004110567.1 CDS Rpdx1_4282 NC_014834.1 4608962 4609666 D KEGG: xau:Xaut_0889 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4608962..4609666 Rhodopseudomonas palustris DX-1 10066516 YP_004110568.1 CDS Rpdx1_4283 NC_014834.1 4609901 4611022 R PFAM: Methionine synthase vitamin-B12 independent; KEGG: bbt:BBta_5702 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; vitamin-B12 independent methionine synthase complement(4609901..4611022) Rhodopseudomonas palustris DX-1 10066517 YP_004110569.1 CDS Rpdx1_4284 NC_014834.1 4611038 4611754 R KEGG: bja:bll5949 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4611038..4611754) Rhodopseudomonas palustris DX-1 10066518 YP_004110570.1 CDS Rpdx1_4285 NC_014834.1 4611763 4612515 R KEGG: bja:bll5950 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4611763..4612515) Rhodopseudomonas palustris DX-1 10066519 YP_004110571.1 CDS Rpdx1_4286 NC_014834.1 4612512 4613540 R PFAM: inner-membrane translocator; KEGG: bja:bll5951 ABC transporter permease protein; inner-membrane translocator complement(4612512..4613540) Rhodopseudomonas palustris DX-1 10066520 YP_004110572.1 CDS Rpdx1_4287 NC_014834.1 4613540 4614406 R PFAM: inner-membrane translocator; KEGG: bra:BRADO5253 putative high-affinity branched-chain amino acid transport system permease protein; inner-membrane translocator complement(4613540..4614406) Rhodopseudomonas palustris DX-1 10066521 YP_004110573.1 CDS Rpdx1_4288 NC_014834.1 4614550 4615728 R PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO5254 branched chain amino acid ABC transporter; extracellular ligand-binding receptor complement(4614550..4615728) Rhodopseudomonas palustris DX-1 10066522 YP_004110574.1 CDS Rpdx1_4289 NC_014834.1 4616058 4616354 D KEGG: bja:blr5954 hypothetical protein; hypothetical protein 4616058..4616354 Rhodopseudomonas palustris DX-1 10066523 YP_004110575.1 CDS Rpdx1_4290 NC_014834.1 4616415 4617278 R KEGG: bbt:BBta_5709 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; formyltetrahydrofolate deformylase complement(4616415..4617278) Rhodopseudomonas palustris DX-1 10066524 YP_004110576.1 CDS Rpdx1_4291 NC_014834.1 4617411 4618262 D PFAM: Uroporphyrinogen III synthase HEM4; KEGG: bbt:BBta_5710 putative uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 4617411..4618262 Rhodopseudomonas palustris DX-1 10066525 YP_004110577.1 CDS Rpdx1_4292 NC_014834.1 4618530 4619759 D KEGG: met:M446_3169 ABC transporter, periplasmic branched chain amino acid binding protein; ABC transporter periplasmic branched chain amino acid-binding protein 4618530..4619759 Rhodopseudomonas palustris DX-1 10066526 YP_004110578.1 CDS Rpdx1_4293 NC_014834.1 4619951 4620898 D PFAM: inner-membrane translocator; KEGG: mno:Mnod_0225 inner-membrane translocator; inner-membrane translocator 4619951..4620898 Rhodopseudomonas palustris DX-1 10066527 YP_004110579.1 CDS Rpdx1_4294 NC_014834.1 4620895 4622196 D PFAM: inner-membrane translocator; KEGG: mno:Mnod_0224 inner-membrane translocator; inner-membrane translocator 4620895..4622196 Rhodopseudomonas palustris DX-1 10066528 YP_004110580.1 CDS Rpdx1_4295 NC_014834.1 4622193 4622942 D KEGG: rpi:Rpic_1451 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4622193..4622942 Rhodopseudomonas palustris DX-1 10066529 YP_004110581.1 CDS Rpdx1_4296 NC_014834.1 4622942 4623637 D KEGG: mno:Mnod_0222 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4622942..4623637 Rhodopseudomonas palustris DX-1 10066530 YP_004110582.1 CDS Rpdx1_4297 NC_014834.1 4623742 4624176 D KEGG: bja:bll4578 transcriptional regulatory protein; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; MerR family transcriptional regulator 4623742..4624176 Rhodopseudomonas palustris DX-1 10066531 YP_004110583.1 CDS Rpdx1_4298 NC_014834.1 4624196 4624504 D PFAM: Carboxymuconolactone decarboxylase; KEGG: pna:Pnap_2188 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 4624196..4624504 Rhodopseudomonas palustris DX-1 10066532 YP_004110584.1 CDS Rpdx1_4299 NC_014834.1 4624655 4625242 D KEGG: bra:BRADO7117 hypothetical protein; hypothetical protein 4624655..4625242 Rhodopseudomonas palustris DX-1 10066533 YP_004110585.1 CDS Rpdx1_4300 NC_014834.1 4625371 4627320 D KEGG: rer:RER_10020 hypothetical protein; hypothetical protein 4625371..4627320 Rhodopseudomonas palustris DX-1 10066534 YP_004110586.1 CDS Rpdx1_4301 NC_014834.1 4627609 4628436 D KEGG: bja:blr5962 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4627609..4628436 Rhodopseudomonas palustris DX-1 10066535 YP_004110587.1 CDS Rpdx1_4302 NC_014834.1 4628433 4630364 D PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr5963 putative long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 4628433..4630364 Rhodopseudomonas palustris DX-1 10066536 YP_004110588.1 CDS Rpdx1_4303 NC_014834.1 4630708 4631601 D PFAM: inner-membrane translocator; KEGG: bja:blr5964 ABC transporter permease protein; inner-membrane translocator 4630708..4631601 Rhodopseudomonas palustris DX-1 10066537 YP_004110589.1 CDS Rpdx1_4304 NC_014834.1 4631603 4632676 D PFAM: inner-membrane translocator; KEGG: bja:blr5965 ABC transporter permease protein; inner-membrane translocator 4631603..4632676 Rhodopseudomonas palustris DX-1 10066538 YP_004110590.1 CDS Rpdx1_4305 NC_014834.1 4632735 4634015 D KEGG: bja:blr5966 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 4632735..4634015 Rhodopseudomonas palustris DX-1 10066539 YP_004110591.1 CDS Rpdx1_4306 NC_014834.1 4634263 4635105 D KEGG: bja:blr5967 ABC transporter substrate-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4634263..4635105 Rhodopseudomonas palustris DX-1 10066540 YP_004110592.1 CDS Rpdx1_4307 NC_014834.1 4635115 4636206 R PFAM: glycosyl transferase group 1; KEGG: ara:Arad_4831 mannosyltransferase B; glycosyl transferase group 1 protein complement(4635115..4636206) Rhodopseudomonas palustris DX-1 10066541 YP_004110593.1 CDS Rpdx1_4308 NC_014834.1 4636349 4637230 D KEGG: ara:Arad_4835 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 4636349..4637230 Rhodopseudomonas palustris DX-1 10066542 YP_004110594.1 CDS Rpdx1_4309 NC_014834.1 4637308 4638465 D PFAM: glycosyl transferase group 1; KEGG: nha:Nham_2777 glycosyl transferase, group 1; glycosyl transferase group 1 protein 4637308..4638465 Rhodopseudomonas palustris DX-1 10066543 YP_004110595.1 CDS Rpdx1_4310 NC_014834.1 4638580 4639416 D PFAM: ABC-2 type transporter; KEGG: epy:EpC_14020 O-antigen ABC transporter permease; ABC-2 type transporter 4638580..4639416 Rhodopseudomonas palustris DX-1 10066544 YP_004110596.1 CDS Rpdx1_4311 NC_014834.1 4639427 4640188 D KEGG: eta:ETA_13390 O-antigen ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4639427..4640188 Rhodopseudomonas palustris DX-1 10066545 YP_004110597.1 CDS Rpdx1_4312 NC_014834.1 4640143 4641348 R PFAM: glycosyl transferase group 1; KEGG: glycosyl transferase group 1; glycosyl transferase group 1 protein complement(4640143..4641348) Rhodopseudomonas palustris DX-1 10066546 YP_004110598.1 CDS Rpdx1_4313 NC_014834.1 4641345 4642469 R TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ara:Arad_4847 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(4641345..4642469) Rhodopseudomonas palustris DX-1 10066547 YP_004110599.1 CDS Rpdx1_4314 NC_014834.1 4642462 4644033 R KEGG: ara:Arad_4846 hypothetical protein; hypothetical protein complement(4642462..4644033) Rhodopseudomonas palustris DX-1 10066548 YP_004110600.1 CDS Rpdx1_4315 NC_014834.1 4644047 4645447 R KEGG: ara:Arad_4843 hypothetical protein; hypothetical protein complement(4644047..4645447) Rhodopseudomonas palustris DX-1 10066549 YP_004110601.1 CDS Rpdx1_4316 NC_014834.1 4645569 4646543 R PFAM: glycosyl transferase group 1; KEGG: ara:Arad_4842 glycosyl transferase protein; glycosyl transferase group 1 protein complement(4645569..4646543) Rhodopseudomonas palustris DX-1 10066550 YP_004110602.1 CDS Rpdx1_4317 NC_014834.1 4646591 4647466 R TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: ara:Arad_4838 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase complement(4646591..4647466) Rhodopseudomonas palustris DX-1 10066551 YP_004110603.1 CDS Rpdx1_4318 NC_014834.1 4647506 4648537 R KEGG: ara:Arad_4837 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase complement(4647506..4648537) Rhodopseudomonas palustris DX-1 10066552 YP_004110604.1 CDS Rpdx1_4319 NC_014834.1 4648868 4649959 D PFAM: glycosyl transferase group 1; KEGG: ara:Arad_4841 glycosyltransferase protein; glycosyl transferase group 1 protein 4648868..4649959 Rhodopseudomonas palustris DX-1 10066553 YP_004110605.1 CDS Rpdx1_4320 NC_014834.1 4650066 4651316 D KEGG: ddc:Dd586_0661 glycosyl transferase group 1; glycosyl transferase group 1 protein 4650066..4651316 Rhodopseudomonas palustris DX-1 10066554 YP_004110606.1 CDS Rpdx1_4321 NC_014834.1 4651358 4654258 R PFAM: glycosyl transferase group 1; KEGG: ddc:Dd586_0663 glycosyl transferase group 1; glycosyl transferase group 1 protein complement(4651358..4654258) Rhodopseudomonas palustris DX-1 10066555 YP_004110607.1 CDS Rpdx1_4322 NC_014834.1 4654255 4656186 R PFAM: glycosyl transferase group 1; KEGG: ddc:Dd586_0662 glycosyl transferase group 1; glycosyl transferase group 1 protein complement(4654255..4656186) Rhodopseudomonas palustris DX-1 10066556 YP_004110608.1 CDS Rpdx1_4323 NC_014834.1 4656423 4657367 R KEGG: hypothetical protein; hypothetical protein complement(4656423..4657367) Rhodopseudomonas palustris DX-1 10066557 YP_004110609.1 CDS Rpdx1_4324 NC_014834.1 4657708 4658262 D TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: swi:Swit_4018 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 4657708..4658262 Rhodopseudomonas palustris DX-1 10066558 YP_004110610.1 CDS Rpdx1_4325 NC_014834.1 4658421 4659401 D KEGG: met:M446_5189 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; GDP-mannose 4,6-dehydratase 4658421..4659401 Rhodopseudomonas palustris DX-1 10066559 YP_004110611.1 CDS Rpdx1_4326 NC_014834.1 4659407 4660378 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: gox:GOX1611 GDP-6-deoxy-D-lyxo-4-hexulose reductase; NAD-dependent epimerase/dehydratase 4659407..4660378 Rhodopseudomonas palustris DX-1 10066560 YP_004110612.1 CDS Rpdx1_4327 NC_014834.1 4660619 4662031 D TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4660619..4662031 Rhodopseudomonas palustris DX-1 10066561 YP_004110613.1 CDS Rpdx1_4328 NC_014834.1 4662100 4663596 D KEGG: bra:BRADO0757 putative phosphomannomutase/phosphoglucomutase (PMM / PGM); PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphomannomutase 4662100..4663596 Rhodopseudomonas palustris DX-1 10066562 YP_004110614.1 CDS Rpdx1_4329 NC_014834.1 4663735 4664079 D KEGG: ago:AGOS_AFR093W AFR093Wp; hypothetical protein 4663735..4664079 Rhodopseudomonas palustris DX-1 10066563 YP_004110615.1 CDS Rpdx1_4330 NC_014834.1 4664195 4664440 R KEGG: bbt:BBta_1854 hypothetical protein; hypothetical protein complement(4664195..4664440) Rhodopseudomonas palustris DX-1 10066564 YP_004110616.1 CDS Rpdx1_4331 NC_014834.1 4664679 4665092 R TIGRFAM: methionine-R-sulfoxide reductase; KEGG: nha:Nham_1128 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase complement(4664679..4665092) Rhodopseudomonas palustris DX-1 10066565 YP_004110617.1 CDS Rpdx1_4332 NC_014834.1 4665123 4665833 R TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bja:blr7043 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase complement(4665123..4665833) Rhodopseudomonas palustris DX-1 10066566 YP_004110618.1 CDS Rpdx1_4333 NC_014834.1 4666393 4669722 D KEGG: oca:OCAR_5131 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit 4666393..4669722 Rhodopseudomonas palustris DX-1 10066568 YP_004110619.1 CDS Rpdx1_4334 NC_014834.1 4669945 4670421 D KEGG: bra:BRADO1324 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; GreA/GreB family elongation factor 4669945..4670421 Rhodopseudomonas palustris DX-1 10066569 YP_004110620.1 CDS Rpdx1_4335 NC_014834.1 4670670 4671080 D PFAM: DoxX family protein; KEGG: bbt:BBta_6801 hypothetical protein; DoxX family protein 4670670..4671080 Rhodopseudomonas palustris DX-1 10066570 YP_004110621.1 CDS Rpdx1_4336 NC_014834.1 4671096 4671578 R KEGG: nwi:Nwi_2452 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(4671096..4671578) Rhodopseudomonas palustris DX-1 10066571 YP_004110622.1 CDS Rpdx1_4337 NC_014834.1 4671835 4672800 D KEGG: bja:blr7381 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 4671835..4672800 Rhodopseudomonas palustris DX-1 10066572 YP_004110623.1 CDS Rpdx1_4338 NC_014834.1 4672808 4673731 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bra:BRADO1320 LysR family transcriptional regulator; LysR family transcriptional regulator 4672808..4673731 Rhodopseudomonas palustris DX-1 10066573 YP_004110624.1 CDS Rpdx1_4339 NC_014834.1 4674074 4674748 R KEGG: nwi:Nwi_2455 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(4674074..4674748) Rhodopseudomonas palustris DX-1 10066574 YP_004110625.1 CDS Rpdx1_4340 NC_014834.1 4674971 4675345 R KEGG: nwi:Nwi_2456 hypothetical protein; hypothetical protein complement(4674971..4675345) Rhodopseudomonas palustris DX-1 10066575 YP_004110626.1 CDS Rpdx1_4341 NC_014834.1 4675441 4675764 R KEGG: bja:bll7386 hypothetical protein; hypothetical protein complement(4675441..4675764) Rhodopseudomonas palustris DX-1 10066576 YP_004110627.1 CDS Rpdx1_4342 NC_014834.1 4676277 4676708 R KEGG: bja:bll7395 hypothetical protein; TIGRFAM: phasin; PFAM: Phasin; phasin complement(4676277..4676708) Rhodopseudomonas palustris DX-1 10066578 YP_004110628.1 CDS Rpdx1_4343 NC_014834.1 4676949 4677332 R KEGG: oca:OCAR_5121 phasin 2; TIGRFAM: phasin; PFAM: Phasin; phasin complement(4676949..4677332) Rhodopseudomonas palustris DX-1 10066579 YP_004110629.1 CDS Rpdx1_4344 NC_014834.1 4677671 4681258 D TIGRFAM: PAS sensor protein; PFAM: histidine kinase A domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; KEGG: bja:blr7396 two-component hybrid sensor and regulator; SMART: histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein; PAS/PAC sensor signal transduction histidine kinase 4677671..4681258 Rhodopseudomonas palustris DX-1 10066580 YP_004110630.1 CDS Rpdx1_4345 NC_014834.1 4681534 4681785 D PFAM: Rv0623 family protein transcription factor; KEGG: gvi:gsr3224 hypothetical protein; protein transcription factor 4681534..4681785 Rhodopseudomonas palustris DX-1 10066581 YP_004110631.1 CDS Rpdx1_4346 NC_014834.1 4681782 4682186 D PFAM: PilT protein domain protein; KEGG: mva:Mvan_1171 PilT domain-containing protein; PilT domain-containing protein 4681782..4682186 Rhodopseudomonas palustris DX-1 10066582 YP_004110632.1 CDS Rpdx1_4347 NC_014834.1 4682270 4682980 D KEGG: bja:blr7084 transcriptional regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 4682270..4682980 Rhodopseudomonas palustris DX-1 10066583 YP_004110633.1 CDS Rpdx1_4348 NC_014834.1 4682977 4683177 R KEGG: bja:bsl7085 hypothetical protein; hypothetical protein complement(4682977..4683177) Rhodopseudomonas palustris DX-1 10066584 YP_004110634.1 CDS Rpdx1_4349 NC_014834.1 4683413 4684525 D TIGRFAM: nitrite reductase, copper-containing; KEGG: bbt:BBta_6826 copper-containing nitrite reductase (NO-forming) NirK; PFAM: multicopper oxidase type 1; multicopper oxidase type 3; nitrite reductase 4683413..4684525 Rhodopseudomonas palustris DX-1 10066585 YP_004110635.1 CDS Rpdx1_4350 NC_014834.1 4684666 4685547 D PFAM: protein of unknown function DUF323; KEGG: bja:blr7090 periplasmic nitrate reductase; hypothetical protein 4684666..4685547 Rhodopseudomonas palustris DX-1 10066586 YP_004110636.1 CDS Rpdx1_4351 NC_014834.1 4685698 4687242 D TIGRFAM: thymidine phosphorylase; KEGG: bja:bll3117 thymidine phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase domain; glycosyl transferase family 3; thymidine phosphorylase 4685698..4687242 Rhodopseudomonas palustris DX-1 10066587 YP_004110637.1 CDS Rpdx1_4352 NC_014834.1 4687239 4688150 D TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: nha:Nham_1899 phosphoribosylpyrophosphate synthetase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 4687239..4688150 Rhodopseudomonas palustris DX-1 10066588 YP_004110638.1 CDS Rpdx1_4353 NC_014834.1 4688147 4689769 D PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: bja:bll3115 hypothetical protein; RNA-metabolising metallo-beta-lactamase 4688147..4689769 Rhodopseudomonas palustris DX-1 10066589 YP_004110639.1 CDS Rpdx1_4354 NC_014834.1 4689947 4690162 D KEGG: pen:PSEEN5412 hypothetical protein; hypothetical protein 4689947..4690162 Rhodopseudomonas palustris DX-1 10066590 YP_004110640.1 CDS Rpdx1_4355 NC_014834.1 4690320 4691330 D PFAM: extracellular solute-binding protein family 1; KEGG: oca:OCAR_5119 extracellular solute-binding protein, family 1; family 1 extracellular solute-binding protein 4690320..4691330 Rhodopseudomonas palustris DX-1 10066591 YP_004110641.1 CDS Rpdx1_4356 NC_014834.1 4691474 4693120 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oca:OCAR_5118 ferric iron uptake ABC transporter (FeT) family, permease protein; binding-protein-dependent transporter inner membrane component 4691474..4693120 Rhodopseudomonas palustris DX-1 10066592 YP_004110642.1 CDS Rpdx1_4357 NC_014834.1 4693251 4693889 D KEGG: nha:Nham_1248 hypothetical protein; hypothetical protein 4693251..4693889 Rhodopseudomonas palustris DX-1 10066593 YP_004110643.1 CDS Rpdx1_4358 NC_014834.1 4693872 4694675 R KEGG: atc:AGR_C_4537 hypothetical protein; TIGRFAM: pyrimidine utilization protein D; PFAM: alpha/beta hydrolase fold; pyrimidine utilization protein D complement(4693872..4694675) Rhodopseudomonas palustris DX-1 10066594 YP_004110644.1 CDS Rpdx1_4359 NC_014834.1 4694681 4695466 R KEGG: azc:AZC_2497 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4694681..4695466) Rhodopseudomonas palustris DX-1 10066595 YP_004110645.1 CDS Rpdx1_4360 NC_014834.1 4695459 4696274 R PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_2496 hydrolase; alpha/beta hydrolase fold protein complement(4695459..4696274) Rhodopseudomonas palustris DX-1 10066596 YP_004110646.1 CDS Rpdx1_4361 NC_014834.1 4696283 4697122 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2495 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component complement(4696283..4697122) Rhodopseudomonas palustris DX-1 10066597 YP_004110647.1 CDS Rpdx1_4362 NC_014834.1 4697125 4697511 R KEGG: mrd:Mrad2831_1582 endoribonuclease L-PSP; TIGRFAM: pyrimidine utilization protein C; PFAM: Endoribonuclease L-PSP; pyrimidine utilization protein C complement(4697125..4697511) Rhodopseudomonas palustris DX-1 10066598 YP_004110648.1 CDS Rpdx1_4363 NC_014834.1 4697541 4698227 R PFAM: isochorismatase hydrolase; KEGG: ecg:E2348C_1062 predicted enzyme; isochorismatase hydrolase complement(4697541..4698227) Rhodopseudomonas palustris DX-1 10066599 YP_004110649.1 CDS Rpdx1_4364 NC_014834.1 4698242 4699300 R KEGG: azc:AZC_2492 putative ABC-type nitrate/sulfonate/bicarbonate transport; putative ABC-type nitrate/sulfonate/bicarbonate transport complement(4698242..4699300) Rhodopseudomonas palustris DX-1 10066600 YP_004110650.1 CDS Rpdx1_4365 NC_014834.1 4699403 4700317 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mrd:Mrad2831_4382 LysR family transcriptional regulator; LysR family transcriptional regulator complement(4699403..4700317) Rhodopseudomonas palustris DX-1 10066601 YP_004110651.1 CDS Rpdx1_4366 NC_014834.1 4700485 4702338 R SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: avn:Avin_08270 ATP-dependent metallopeptidase M41, FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; ATP-dependent metalloprotease FtsH complement(4700485..4702338) Rhodopseudomonas palustris DX-1 10066602 YP_004110652.1 CDS Rpdx1_4367 NC_014834.1 4702693 4703343 R TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: bra:BRADO1224 acetyl-CoA:acetoacetyl-CoA transferase, beta subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(4702693..4703343) Rhodopseudomonas palustris DX-1 10066603 YP_004110653.1 CDS Rpdx1_4368 NC_014834.1 4703355 4704071 R TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: bbt:BBta_6830 acetyl-CoA/acetoacetyl-CoA transferase, alpha subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(4703355..4704071) Rhodopseudomonas palustris DX-1 10066604 YP_004110654.1 CDS Rpdx1_4369 NC_014834.1 4704276 4706222 D PFAM: AsmA family protein; KEGG: nha:Nham_1245 AsmA; AsmA family protein 4704276..4706222 Rhodopseudomonas palustris DX-1 10066605 YP_004110655.1 CDS Rpdx1_4370 NC_014834.1 4706281 4707081 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7103 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component complement(4706281..4707081) Rhodopseudomonas palustris DX-1 10066606 YP_004110656.1 CDS Rpdx1_4371 NC_014834.1 4707241 4708155 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7104 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component complement(4707241..4708155) Rhodopseudomonas palustris DX-1 10066607 YP_004110657.1 CDS Rpdx1_4372 NC_014834.1 4708152 4709297 R TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; KEGG: bbt:BBta_6838 putrescine ABC transporter ATP-binding protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(4708152..4709297) Rhodopseudomonas palustris DX-1 10066608 YP_004110658.1 CDS Rpdx1_4373 NC_014834.1 4709398 4710174 R PFAM: regulatory protein IclR; KEGG: xau:Xaut_1568 transcriptional regulator, TrmB; regulatory protein IclR complement(4709398..4710174) Rhodopseudomonas palustris DX-1 10066609 YP_004110659.1 CDS Rpdx1_4374 NC_014834.1 4710436 4711269 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mka:MK0602 nitrate/sulfonate/bicarbonate ABC transporter permease; binding-protein-dependent transporter inner membrane component 4710436..4711269 Rhodopseudomonas palustris DX-1 10066610 YP_004110660.1 CDS Rpdx1_4375 NC_014834.1 4711280 4712134 D KEGG: ckr:CKR_0943 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4711280..4712134 Rhodopseudomonas palustris DX-1 10066611 YP_004110661.1 CDS Rpdx1_4376 NC_014834.1 4712138 4713193 D KEGG: mrd:Mrad2831_6160 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; hypothetical protein 4712138..4713193 Rhodopseudomonas palustris DX-1 10066612 YP_004110662.1 CDS Rpdx1_4377 NC_014834.1 4713385 4714113 D PFAM: flavin reductase domain protein FMN-binding; KEGG: mms:mma_2479 hypothetical protein; flavin reductase FMN-binding protein 4713385..4714113 Rhodopseudomonas palustris DX-1 10066613 YP_004110663.1 CDS Rpdx1_4378 NC_014834.1 4714125 4715078 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sfu:Sfum_2312 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 4714125..4715078 Rhodopseudomonas palustris DX-1 10066614 YP_004110664.1 CDS Rpdx1_4379 NC_014834.1 4715120 4717747 R TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bra:BRADO1213 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase complement(4715120..4717747) Rhodopseudomonas palustris DX-1 10066615 YP_004110665.1 CDS Rpdx1_4380 NC_014834.1 4717965 4719065 D PFAM: FAD dependent oxidoreductase; KEGG: bra:BRADO1212 NAD binding site:FAD dependent oxidoreductase; FAD dependent oxidoreductase 4717965..4719065 Rhodopseudomonas palustris DX-1 10066616 YP_004110666.1 CDS Rpdx1_4382 NC_014834.1 4719721 4719903 R KEGG: bja:bsl7109 hypothetical protein; hypothetical protein complement(4719721..4719903) Rhodopseudomonas palustris DX-1 10066618 YP_004110667.1 CDS Rpdx1_4383 NC_014834.1 4720233 4720466 D PFAM: protein of unknown function DUF465; KEGG: nwi:Nwi_1003 hypothetical protein; hypothetical protein 4720233..4720466 Rhodopseudomonas palustris DX-1 10066619 YP_004110668.1 CDS Rpdx1_4384 NC_014834.1 4720456 4721184 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nha:Nham_1237 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase complement(4720456..4721184) Rhodopseudomonas palustris DX-1 10066620 YP_004110669.1 CDS Rpdx1_4385 NC_014834.1 4721338 4721826 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: bbt:BBta_6848 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 4721338..4721826 Rhodopseudomonas palustris DX-1 10066621 YP_004110670.1 CDS Rpdx1_4386 NC_014834.1 4721823 4722923 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: bbt:BBta_6849 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit 4721823..4722923 Rhodopseudomonas palustris DX-1 10066622 YP_004110671.1 CDS Rpdx1_4387 NC_014834.1 4723092 4723355 D KEGG: oca:OCAR_5101 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 4723092..4723355 Rhodopseudomonas palustris DX-1 10066623 YP_004110672.1 CDS Rpdx1_4388 NC_014834.1 4723514 4724245 R KEGG: bja:bll7119 hypothetical protein; hypothetical protein complement(4723514..4724245) Rhodopseudomonas palustris DX-1 10066624 YP_004110673.1 CDS Rpdx1_4389 NC_014834.1 4724392 4724679 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: bja:bsl7120 hypothetical protein; cupin complement(4724392..4724679) Rhodopseudomonas palustris DX-1 10066625 YP_004110674.1 CDS Rpdx1_4390 NC_014834.1 4724883 4725257 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbt:BBta_3517 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 4724883..4725257 Rhodopseudomonas palustris DX-1 10066626 YP_004110675.1 CDS Rpdx1_4391 NC_014834.1 4725440 4726843 R KEGG: bja:bll7124 NAD(P)+ transhydrogenase beta chain; PFAM: NAD(P) transhydrogenase beta subunit; NAD(P)(+) transhydrogenase complement(4725440..4726843) Rhodopseudomonas palustris DX-1 10066627 YP_004110676.1 CDS Rpdx1_4392 NC_014834.1 4726857 4727180 R KEGG: oca:OCAR_5095 NAD(P) transhydrogenase subunit alpha; NAD(P) transhydrogenase subunit alpha complement(4726857..4727180) Rhodopseudomonas palustris DX-1 10066628 YP_004110677.1 CDS Rpdx1_4393 NC_014834.1 4727206 4728333 R KEGG: bja:bll7126 NAD(P)+ transhydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; NAD(P)(+) transhydrogenase complement(4727206..4728333) Rhodopseudomonas palustris DX-1 10066629 YP_004110678.1 CDS Rpdx1_4394 NC_014834.1 4728529 4728681 R PFAM: aa3 type cytochrome c oxidase subunit IV; KEGG: bja:bsl7127 hypothetical protein; aa3 type cytochrome c oxidase subunit IV complement(4728529..4728681) Rhodopseudomonas palustris DX-1 10066630 YP_004110679.1 CDS Rpdx1_4395 NC_014834.1 4728967 4729350 R KEGG: bbt:BBta_6860 putative death on curing protein; TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; death-on-curing family protein complement(4728967..4729350) Rhodopseudomonas palustris DX-1 10066631 YP_004110680.1 CDS Rpdx1_4396 NC_014834.1 4729347 4729616 R TIGRFAM: addiction module antidote; KEGG: bbt:BBta_6861 transcriptional regulator/antitoxin, MazE; addiction module antidote protein complement(4729347..4729616) Rhodopseudomonas palustris DX-1 10066632 YP_004110681.1 CDS Rpdx1_4397 NC_014834.1 4729699 4731618 R KEGG: bbt:BBta_6862 putative oligoendopeptidase F; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; oligoendopeptidase complement(4729699..4731618) Rhodopseudomonas palustris DX-1 10066633 YP_004110682.1 CDS Rpdx1_4398 NC_014834.1 4731990 4732625 D PFAM: Integral membrane protein TerC; KEGG: azl:AZL_d01240 TerC-like integral membrane protein; integral membrane protein TerC 4731990..4732625 Rhodopseudomonas palustris DX-1 10066634 YP_004110683.1 CDS Rpdx1_4399 NC_014834.1 4732721 4734208 D KEGG: nha:Nham_1224 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; Fis family two component sigma54 specific transcriptional regulator 4732721..4734208 Rhodopseudomonas palustris DX-1 10066635 YP_004110684.1 CDS Rpdx1_4400 NC_014834.1 4734564 4736795 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: bja:blr7131 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 4734564..4736795 Rhodopseudomonas palustris DX-1 10066636 YP_004110685.1 CDS Rpdx1_4401 NC_014834.1 4737132 4738739 D PFAM: protein of unknown function DUF882; KEGG: nha:Nham_1222 hypothetical protein; hypothetical protein 4737132..4738739 Rhodopseudomonas palustris DX-1 10066637 YP_004110686.1 CDS Rpdx1_4402 NC_014834.1 4738875 4739147 R PFAM: Protein of unknown function DUF2312; KEGG: nha:Nham_1221 hypothetical protein; hypothetical protein complement(4738875..4739147) Rhodopseudomonas palustris DX-1 10066638 YP_004110687.1 CDS Rpdx1_4403 NC_014834.1 4739336 4739635 R PFAM: protein of unknown function DUF1244; KEGG: bja:bll7136 hypothetical protein; hypothetical protein complement(4739336..4739635) Rhodopseudomonas palustris DX-1 10066639 YP_004110688.1 CDS Rpdx1_4404 NC_014834.1 4739828 4740424 D PFAM: protein of unknown function DUF1036; KEGG: bra:BRADO1186 putative signal peptide; hypothetical protein 4739828..4740424 Rhodopseudomonas palustris DX-1 10066640 YP_004110689.1 CDS Rpdx1_4405 NC_014834.1 4740421 4741854 D TIGRFAM: pyruvate kinase; KEGG: bra:BRADO1185 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 4740421..4741854 Rhodopseudomonas palustris DX-1 10066641 YP_004110690.1 CDS Rpdx1_4406 NC_014834.1 4741864 4742322 R PFAM: protein of unknown function UPF0150; KEGG: bgr:Bgr_03670 putative transcriptional regulator; hypothetical protein complement(4741864..4742322) Rhodopseudomonas palustris DX-1 10066642 YP_004110691.1 CDS Rpdx1_4407 NC_014834.1 4742324 4742422 R hypothetical protein complement(4742324..4742422) Rhodopseudomonas palustris DX-1 10066643 YP_004110692.1 CDS Rpdx1_4408 NC_014834.1 4742398 4742523 R hypothetical protein complement(4742398..4742523) Rhodopseudomonas palustris DX-1 10066644 YP_004110693.1 CDS Rpdx1_4409 NC_014834.1 4742716 4743144 R TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: azc:AZC_1807 OsmC-like protein; PFAM: OsmC family protein; peroxiredoxin complement(4742716..4743144) Rhodopseudomonas palustris DX-1 10066645 YP_004110694.1 CDS Rpdx1_4410 NC_014834.1 4743268 4743930 R PFAM: TPR repeat-containing protein; KEGG: bbt:BBta_1657 hypothetical protein; hypothetical protein complement(4743268..4743930) Rhodopseudomonas palustris DX-1 10066646 YP_004110695.1 CDS Rpdx1_4411 NC_014834.1 4744027 4744152 R TIGRFAM: ribosomal protein L36; KEGG: nha:Nham_1214 50S ribosomal protein L36; 50S ribosomal protein L36 complement(4744027..4744152) Rhodopseudomonas palustris DX-1 10066647 YP_004110696.1 CDS Rpdx1_4412 NC_014834.1 4744471 4745340 D PFAM: amidohydrolase 2; KEGG: bja:blr7549 hypothetical protein; amidohydrolase 2 4744471..4745340 Rhodopseudomonas palustris DX-1 10066648 YP_004110697.1 CDS Rpdx1_4413 NC_014834.1 4745610 4746350 D TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: bbt:BBta_1654 2-haloacid dehalogenase; PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase 4745610..4746350 Rhodopseudomonas palustris DX-1 10066649 YP_004110698.1 CDS Rpdx1_4414 NC_014834.1 4746426 4746893 D PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bbt:BBta_1653 putative YbaK-like protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 4746426..4746893 Rhodopseudomonas palustris DX-1 10066650 YP_004110699.1 CDS Rpdx1_4415 NC_014834.1 4747127 4747648 D PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pde:Pden_3538 TRAP dicarboxylate family transporter DctQ subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 4747127..4747648 Rhodopseudomonas palustris DX-1 10066651 YP_004110700.1 CDS Rpdx1_4416 NC_014834.1 4747680 4748987 D KEGG: bpt:Bpet1218 TrapT family protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 4747680..4748987 Rhodopseudomonas palustris DX-1 10066652 YP_004110701.1 CDS Rpdx1_4417 NC_014834.1 4749055 4750185 D PFAM: Extracellular solute-binding protein, family 7; KEGG: bpt:Bpet1219 hypothetical protein; family 7 extracellular solute-binding protein 4749055..4750185 Rhodopseudomonas palustris DX-1 10066653 YP_004110702.1 CDS Rpdx1_4418 NC_014834.1 4750281 4750586 R KEGG: bja:bsl2782 hypothetical protein; hypothetical protein complement(4750281..4750586) Rhodopseudomonas palustris DX-1 10066654 YP_004110703.1 CDS Rpdx1_4419 NC_014834.1 4750739 4752064 R KEGG: azl:AZL_007500 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4750739..4752064) Rhodopseudomonas palustris DX-1 10066655 YP_004110704.1 CDS Rpdx1_4420 NC_014834.1 4752039 4752560 R TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: azl:AZL_007490 chemotaxis sensory transducer; SMART: PAS domain containing protein; PAS sensor protein complement(4752039..4752560) Rhodopseudomonas palustris DX-1 10066656 YP_004110705.1 CDS Rpdx1_4421 NC_014834.1 4752789 4753001 R KEGG: bfo:BRAFLDRAFT_126631 hypothetical protein; hypothetical protein complement(4752789..4753001) Rhodopseudomonas palustris DX-1 10066657 YP_004110706.1 CDS Rpdx1_4422 NC_014834.1 4753207 4754571 D PFAM: virulence factor MVIN family protein; polysaccharide biosynthesis protein; KEGG: nha:Nham_3553 polysaccharide biosynthesis protein; virulence factor MVIN family protein 4753207..4754571 Rhodopseudomonas palustris DX-1 10066658 YP_004110707.1 CDS Rpdx1_4423 NC_014834.1 4754692 4755480 R KEGG: nha:Nham_3554 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; 3-hydroxybutyrate dehydrogenase complement(4754692..4755480) Rhodopseudomonas palustris DX-1 10066659 YP_004110708.1 CDS Rpdx1_4424 NC_014834.1 4755529 4756668 R PFAM: Patatin; KEGG: nha:Nham_3555 patatin; patatin complement(4755529..4756668) Rhodopseudomonas palustris DX-1 10066660 YP_004110709.1 CDS Rpdx1_4425 NC_014834.1 4756764 4757276 R PFAM: SCP-like extracellular; KEGG: bja:blr1486 hypothetical protein; hypothetical protein complement(4756764..4757276) Rhodopseudomonas palustris DX-1 10066661 YP_004110710.1 CDS Rpdx1_4426 NC_014834.1 4757463 4758500 R KEGG: met:M446_4572 glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamate--ammonia ligase complement(4757463..4758500) Rhodopseudomonas palustris DX-1 10066662 YP_004110711.1 CDS Rpdx1_4427 NC_014834.1 4758994 4759176 D KEGG: bja:bsl4167 putative glutamine synthetase translation inhibitor; putative glutamine synthetase translation inhibitor 4758994..4759176 Rhodopseudomonas palustris DX-1 10066663 YP_004110712.1 CDS Rpdx1_4428 NC_014834.1 4759284 4760219 R TIGRFAM: Glutaminase, core; KEGG: mno:Mnod_4504 glutaminase, core; PFAM: Glutaminase, core; glutaminase complement(4759284..4760219) Rhodopseudomonas palustris DX-1 10066664 YP_004110713.1 CDS Rpdx1_4429 NC_014834.1 4760745 4761254 R PFAM: conserved hypothetical protein; KEGG: bra:BRADO1068 hypothetical protein; hypothetical protein complement(4760745..4761254) Rhodopseudomonas palustris DX-1 10066665 YP_004110714.1 CDS Rpdx1_4430 NC_014834.1 4761241 4762896 R PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: bja:blr1479 ferredoxin-nitrite reductase; nitrite and sulfite reductase 4Fe-4S region complement(4761241..4762896) Rhodopseudomonas palustris DX-1 10066666 YP_004110715.1 CDS Rpdx1_4431 NC_014834.1 4762907 4763221 R KEGG: bra:BRADO1066 hypothetical protein; hypothetical protein complement(4762907..4763221) Rhodopseudomonas palustris DX-1 10066667 YP_004110716.1 CDS Rpdx1_4432 NC_014834.1 4763218 4764654 R KEGG: bbt:BBta_6982 uroporphyrinogen-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain; uroporphyrin-III C-methyltransferase complement(4763218..4764654) Rhodopseudomonas palustris DX-1 10066668 YP_004110717.1 CDS Rpdx1_4433 NC_014834.1 4764966 4765973 D KEGG: oan:Oant_1854 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter substrate-binding protein 4764966..4765973 Rhodopseudomonas palustris DX-1 10066669 YP_004110718.1 CDS Rpdx1_4434 NC_014834.1 4766319 4767146 D KEGG: azc:AZC_3733 sulfate ABC transporter permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 4766319..4767146 Rhodopseudomonas palustris DX-1 10066670 YP_004110719.1 CDS Rpdx1_4435 NC_014834.1 4767143 4768012 D KEGG: azc:AZC_3734 sulfate ABC transporter permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 4767143..4768012 Rhodopseudomonas palustris DX-1 10066671 YP_004110720.1 CDS Rpdx1_4436 NC_014834.1 4768245 4770419 D TIGRFAM: malate synthase G; KEGG: bra:BRADO1059 malate synthase G; PFAM: Malate synthase family protein; malate synthase G 4768245..4770419 Rhodopseudomonas palustris DX-1 10066672 YP_004110721.1 CDS Rpdx1_4437 NC_014834.1 4770612 4770812 D PFAM: CsbD family protein; KEGG: ret:RHE_CH01802 hypothetical protein; CsbD family protein 4770612..4770812 Rhodopseudomonas palustris DX-1 10066673 YP_004110722.1 CDS Rpdx1_4438 NC_014834.1 4771256 4771417 R KEGG: bja:bsr1472 hypothetical protein; hypothetical protein complement(4771256..4771417) Rhodopseudomonas palustris DX-1 10066674 YP_004110723.1 CDS Rpdx1_4439 NC_014834.1 4771572 4772240 R KEGG: bra:BRADO1056 putative signal peptide; hypothetical protein complement(4771572..4772240) Rhodopseudomonas palustris DX-1 10066675 YP_004110724.1 CDS Rpdx1_4440 NC_014834.1 4772264 4773040 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr1468 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(4772264..4773040) Rhodopseudomonas palustris DX-1 10066676 YP_004110725.1 CDS Rpdx1_4441 NC_014834.1 4773236 4774339 D PFAM: protein of unknown function UPF0118; KEGG: bja:bll1467 hypothetical protein; hypothetical protein 4773236..4774339 Rhodopseudomonas palustris DX-1 10066677 YP_004110726.1 CDS Rpdx1_4442 NC_014834.1 4774428 4774814 R KEGG: bja:bll7790 hypothetical protein; hypothetical protein complement(4774428..4774814) Rhodopseudomonas palustris DX-1 10066678 YP_004110727.1 CDS Rpdx1_4443 NC_014834.1 4775198 4776004 R KEGG: bja:bll7795 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver complement(4775198..4776004) Rhodopseudomonas palustris DX-1 10066679 YP_004110728.1 CDS Rpdx1_4444 NC_014834.1 4776209 4776448 D KEGG: bra:BRADO1048 hypothetical protein; hypothetical protein 4776209..4776448 Rhodopseudomonas palustris DX-1 10066680 YP_004110729.1 CDS Rpdx1_4445 NC_014834.1 4776448 4776993 D KEGG: bja:blr7797 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 4776448..4776993 Rhodopseudomonas palustris DX-1 10066681 YP_004110730.1 CDS Rpdx1_4446 NC_014834.1 4777153 4778817 R PFAM: HWE histidine kinase; KEGG: bbt:BBta_7004 signal transduction histidine kinase; signal transduction histidine kinase complement(4777153..4778817) Rhodopseudomonas palustris DX-1 10066682 YP_004110731.1 CDS Rpdx1_4447 NC_014834.1 4779071 4779700 R KEGG: bra:BRADO1045 urease accessory protein UreG; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; urease accessory protein UreG complement(4779071..4779700) Rhodopseudomonas palustris DX-1 10066683 YP_004110732.1 CDS Rpdx1_4448 NC_014834.1 4780106 4780456 D KEGG: pvx:PVX_097685 merozoite surface protein 3 (MSP3); hypothetical protein 4780106..4780456 Rhodopseudomonas palustris DX-1 10066684 YP_004110733.1 CDS Rpdx1_4449 NC_014834.1 4780923 4781207 D KEGG: oca:OCAR_5016 hypothetical protein; hypothetical protein 4780923..4781207 Rhodopseudomonas palustris DX-1 10066685 YP_004110734.1 CDS Rpdx1_4450 NC_014834.1 4781278 4783389 R KEGG: bbt:BBta_5740 putative dimethyl sulfoxide reductase(DMSO reductase); PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; nitrate reductase complement(4781278..4783389) Rhodopseudomonas palustris DX-1 10066686 YP_004110735.1 CDS Rpdx1_4451 NC_014834.1 4783541 4783867 D manually curated; KEGG: bja:blr7579 hypothetical protein; hypothetical protein 4783541..4783867 Rhodopseudomonas palustris DX-1 10066687 YP_004110736.1 CDS Rpdx1_4452 NC_014834.1 4783918 4784637 R KEGG: bja:bll6061 transcriptional regulatory protein; PFAM: regulatory protein Crp; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator complement(4783918..4784637) Rhodopseudomonas palustris DX-1 10066688 YP_004110737.1 CDS Rpdx1_4453 NC_014834.1 4784832 4785149 D KEGG: bra:BRADO5301 putative cytochrome c; putative cytochrome c 4784832..4785149 Rhodopseudomonas palustris DX-1 10066689 YP_004110738.1 CDS Rpdx1_4454 NC_014834.1 4785109 4786308 R PFAM: Mammalian cell entry related domain protein; protein of unknown function DUF330; KEGG: nha:Nham_1923 hypothetical protein; mammalian cell entry related domain-containing protein complement(4785109..4786308) Rhodopseudomonas palustris DX-1 10066690 YP_004110739.1 CDS Rpdx1_4455 NC_014834.1 4786320 4787099 R KEGG: bja:bll6064 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein complement(4786320..4787099) Rhodopseudomonas palustris DX-1 10066691 YP_004110740.1 CDS Rpdx1_4456 NC_014834.1 4787102 4788250 R PFAM: protein of unknown function DUF140; KEGG: nha:Nham_1921 hypothetical protein; hypothetical protein complement(4787102..4788250) Rhodopseudomonas palustris DX-1 10066692 YP_004110741.1 CDS Rpdx1_4457 NC_014834.1 4788401 4788811 D KEGG: nha:Nham_1920 hypothetical protein; hypothetical protein 4788401..4788811 Rhodopseudomonas palustris DX-1 10066693 YP_004110742.1 CDS Rpdx1_4458 NC_014834.1 4789057 4789899 R KEGG: gsu:GSU1300 methyl-accepting chemotaxis protein; hypothetical protein complement(4789057..4789899) Rhodopseudomonas palustris DX-1 10066694 YP_004110743.1 CDS Rpdx1_4459 NC_014834.1 4790241 4792964 R PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: bja:bll6068 hypothetical protein; N-acetyltransferase GCN5 complement(4790241..4792964) Rhodopseudomonas palustris DX-1 10066695 YP_004110744.1 CDS Rpdx1_4460 NC_014834.1 4793102 4793530 R KEGG: bra:BRADO2437 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; hypothetical protein complement(4793102..4793530) Rhodopseudomonas palustris DX-1 10066696 YP_004110745.1 CDS Rpdx1_4461 NC_014834.1 4793787 4795349 D KEGG: nha:Nham_1915 hypothetical protein; hypothetical protein 4793787..4795349 Rhodopseudomonas palustris DX-1 10066697 YP_004110746.1 CDS Rpdx1_4462 NC_014834.1 4795331 4797094 R PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: bja:bll6073 poly-beta-hydroxybutyrate polymerase; poly-beta-hydroxybutyrate polymerase domain-containing protein complement(4795331..4797094) Rhodopseudomonas palustris DX-1 10066698 YP_004110747.1 CDS Rpdx1_4463 NC_014834.1 4797366 4798202 R PFAM: UspA domain protein; KEGG: nha:Nham_1913 hypothetical protein; UspA domain-containing protein complement(4797366..4798202) Rhodopseudomonas palustris DX-1 10066699 YP_004110748.1 CDS Rpdx1_4464 NC_014834.1 4798414 4799247 D PFAM: UspA domain protein; KEGG: bja:bll2590 hypothetical protein; UspA domain-containing protein 4798414..4799247 Rhodopseudomonas palustris DX-1 10066700 YP_004110749.1 CDS Rpdx1_4465 NC_014834.1 4799336 4800067 D KEGG: bra:BRADO5312 hypothetical protein; PFAM: CBS domain containing protein; transport-associated; SMART: CBS domain containing protein; putative signal transduction protein 4799336..4800067 Rhodopseudomonas palustris DX-1 10066701 YP_004110750.1 CDS Rpdx1_4466 NC_014834.1 4800215 4801741 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: oca:OCAR_7132 sensor protein FixL; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4800215..4801741 Rhodopseudomonas palustris DX-1 10066702 YP_004110751.1 CDS Rpdx1_4467 NC_014834.1 4801734 4802345 D KEGG: bra:BRADO2434 response regulator FixJ; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family two component transcriptional regulator 4801734..4802345 Rhodopseudomonas palustris DX-1 10066703 YP_004110752.1 CDS Rpdx1_4468 NC_014834.1 4802430 4802822 D KEGG: bja:bll2758 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 4802430..4802822 Rhodopseudomonas palustris DX-1 10066704 YP_004110753.1 CDS Rpdx1_4469 NC_014834.1 4803009 4803698 D KEGG: bja:bll2757 transcriptional regulator FixK; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 4803009..4803698 Rhodopseudomonas palustris DX-1 10066705 YP_004110754.1 CDS Rpdx1_4470 NC_014834.1 4804021 4805328 D TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: avi:Avi_5163 O-acetylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 4804021..4805328 Rhodopseudomonas palustris DX-1 10066706 YP_004110755.1 CDS Rpdx1_4471 NC_014834.1 4805437 4806801 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rsh:Rsph17029_1748 NADH dehydrogenase (quinone); NADH/ubiquinone/plastoquinone complement(4805437..4806801) Rhodopseudomonas palustris DX-1 10066707 YP_004110756.1 CDS Rpdx1_4472 NC_014834.1 4806812 4808254 R KEGG: rsq:Rsph17025_1700 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M complement(4806812..4808254) Rhodopseudomonas palustris DX-1 10066708 YP_004110757.1 CDS Rpdx1_4473 NC_014834.1 4808245 4810314 R KEGG: rsq:Rsph17025_1699 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase subunit L complement(4808245..4810314) Rhodopseudomonas palustris DX-1 10066709 YP_004110758.1 CDS Rpdx1_4474 NC_014834.1 4810317 4810625 R PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rsk:RSKD131_1426 NADH-ubiquinone oxidoreductase, chain 4L precursor; NADH-ubiquinone oxidoreductase subunit 4L complement(4810317..4810625) Rhodopseudomonas palustris DX-1 10066710 YP_004110759.1 CDS Rpdx1_4475 NC_014834.1 4810622 4811128 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: rsp:RSP_0108 NADH dehydrogenase I chain J; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 complement(4810622..4811128) Rhodopseudomonas palustris DX-1 10066711 YP_004110760.1 CDS Rpdx1_4476 NC_014834.1 4811125 4811646 R TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: eca:ECA3021 NADH dehydrogenase subunit I; NADH-quinone oxidoreductase subunit I complement(4811125..4811646) Rhodopseudomonas palustris DX-1 10066712 YP_004110761.1 CDS Rpdx1_4477 NC_014834.1 4811643 4812602 R PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rsp:RSP_0106 putative NADH dehydrogenase I chain H; respiratory-chain NADH dehydrogenase subunit 1 complement(4811643..4812602) Rhodopseudomonas palustris DX-1 10066713 YP_004110762.1 CDS Rpdx1_4478 NC_014834.1 4812599 4815232 R KEGG: rsq:Rsph17025_1694 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; NADH-quinone oxidoreductase subunit G complement(4812599..4815232) Rhodopseudomonas palustris DX-1 10066714 YP_004110763.1 CDS Rpdx1_4479 NC_014834.1 4815229 4816515 R KEGG: rsh:Rsph17029_1740 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) complement(4815229..4816515) Rhodopseudomonas palustris DX-1 10066715 YP_004110764.1 CDS Rpdx1_4480 NC_014834.1 4816512 4817000 R PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rsq:Rsph17025_1692 NADH dehydrogenase subunit E; NADH dehydrogenase (ubiquinone) 24 kDa subunit complement(4816512..4817000) Rhodopseudomonas palustris DX-1 10066716 YP_004110765.1 CDS Rpdx1_4481 NC_014834.1 4816997 4818742 R KEGG: rsk:RSKD131_1418 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase I subunit D complement(4816997..4818742) Rhodopseudomonas palustris DX-1 10066717 YP_004110766.1 CDS Rpdx1_4482 NC_014834.1 4818739 4819365 R TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: rsq:Rsph17025_1690 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B complement(4818739..4819365) Rhodopseudomonas palustris DX-1 10066718 YP_004110767.1 CDS Rpdx1_4483 NC_014834.1 4819362 4819751 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: pap:PSPA7_2570 NADH dehydrogenase subunit A; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 complement(4819362..4819751) Rhodopseudomonas palustris DX-1 10066719 YP_004110768.1 CDS Rpdx1_4484 NC_014834.1 4820215 4822014 D KEGG: nha:Nham_3736 cyclic beta-1,2-glucan ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein 4820215..4822014 Rhodopseudomonas palustris DX-1 10066720 YP_004110769.1 CDS Rpdx1_4485 NC_014834.1 4822185 4823636 D KEGG: bja:bll1320 penicillin-binding protein; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; serine-type D-Ala-D-Ala carboxypeptidase 4822185..4823636 Rhodopseudomonas palustris DX-1 10066721 YP_004110770.1 CDS Rpdx1_4486 NC_014834.1 4823912 4825603 D PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO6584 acyl-CoA synthetase; AMP-dependent synthetase and ligase 4823912..4825603 Rhodopseudomonas palustris DX-1 10066722 YP_004110771.1 CDS Rpdx1_4487 NC_014834.1 4825859 4826344 D PFAM: Redoxin domain protein; KEGG: bja:bll1317 peroxiredoxin; redoxin domain-containing protein 4825859..4826344 Rhodopseudomonas palustris DX-1 10066723 YP_004110772.1 CDS Rpdx1_4488 NC_014834.1 4826555 4827010 R KEGG: bja:blr1316 ribonuclease H; PFAM: ribonuclease H; Ribonuclease H complement(4826555..4827010) Rhodopseudomonas palustris DX-1 10066724 YP_004110773.1 CDS Rpdx1_4489 NC_014834.1 4827007 4827990 R TIGRFAM: homoserine kinase; KEGG: bja:blr1315 homoserine kinase; PFAM: aminoglycoside phosphotransferase; homoserine kinase complement(4827007..4827990) Rhodopseudomonas palustris DX-1 10066725 YP_004110774.1 CDS Rpdx1_4490 NC_014834.1 4828093 4829055 R TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: nha:Nham_3745 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase complement(4828093..4829055) Rhodopseudomonas palustris DX-1 10066726 YP_004110775.1 CDS Rpdx1_4491 NC_014834.1 4829316 4830032 D PFAM: protein of unknown function DUF1013; KEGG: nha:Nham_3746 hypothetical protein; hypothetical protein 4829316..4830032 Rhodopseudomonas palustris DX-1 10066727 YP_004110776.1 CDS Rpdx1_4492 NC_014834.1 4830212 4830589 R KEGG: dpe:Dper_GL17156 GL17156 gene product from transcript GL17156-RA; hypothetical protein complement(4830212..4830589) Rhodopseudomonas palustris DX-1 10066728 YP_004110777.1 CDS Rpdx1_4493 NC_014834.1 4831126 4833738 D PFAM: ATP-binding region ATPase domain protein; KEGG: mma:MM_2421 chaperone protein; ATP-binding protein 4831126..4833738 Rhodopseudomonas palustris DX-1 10066729 YP_004110778.1 CDS Rpdx1_4494 NC_014834.1 4834248 4834541 D TIGRFAM: prevent-host-death family protein; KEGG: msl:Msil_1401 prevent-host-death family protein; prevent-host-death family protein 4834248..4834541 Rhodopseudomonas palustris DX-1 10066730 YP_004110779.1 CDS Rpdx1_4495 NC_014834.1 4834538 4834960 D PFAM: PilT protein domain protein; KEGG: msl:Msil_1400 PilT protein domain protein; PilT domain-containing protein 4834538..4834960 Rhodopseudomonas palustris DX-1 10066731 YP_004110780.1 CDS Rpdx1_4496 NC_014834.1 4835182 4835478 D manually curated; KEGG: bpf:BpOF4_00490 hypothetical protein; hypothetical protein 4835182..4835478 Rhodopseudomonas palustris DX-1 10066732 YP_004110781.1 CDS Rpdx1_4497 NC_014834.1 4835661 4836134 D PFAM: BLUF domain protein; KEGG: mch:Mchl_4401 BLUF domain protein; BLUF domain-containing protein 4835661..4836134 Rhodopseudomonas palustris DX-1 10066733 YP_004110782.1 CDS Rpdx1_4498 NC_014834.1 4836147 4837052 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: msl:Msil_3204 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4836147..4837052) Rhodopseudomonas palustris DX-1 10066734 YP_004110783.1 CDS Rpdx1_4499 NC_014834.1 4837145 4837786 D PFAM: YceI family protein; KEGG: mrd:Mrad2831_5253 YceI family protein; hypothetical protein 4837145..4837786 Rhodopseudomonas palustris DX-1 10066735 YP_004110784.1 CDS Rpdx1_4500 NC_014834.1 4837860 4838450 D PFAM: nitroreductase; KEGG: cvi:CV_1813 hypothetical protein; nitroreductase 4837860..4838450 Rhodopseudomonas palustris DX-1 10066736 YP_004110785.1 CDS Rpdx1_4502 NC_014834.1 4839102 4839737 R PFAM: Methyltransferase type 11; KEGG: lch:Lcho_1387 methyltransferase type 11; type 11 methyltransferase complement(4839102..4839737) Rhodopseudomonas palustris DX-1 10066738 YP_004110786.1 CDS Rpdx1_4503 NC_014834.1 4839871 4840638 D KEGG: psb:Psyr_0778 type III effector HopAG1; type III effector HopAG1 4839871..4840638 Rhodopseudomonas palustris DX-1 10066739 YP_004110787.1 CDS Rpdx1_4504 NC_014834.1 4840638 4841195 D KEGG: alv:Alvin_0881 dual specificity protein phosphatase; dual specificity protein phosphatase 4840638..4841195 Rhodopseudomonas palustris DX-1 10066740 YP_004110788.1 CDS Rpdx1_4505 NC_014834.1 4841329 4841775 D PFAM: Phosphate-starvation-inducible E-like; KEGG: apb:SAR116_0955 phosphate-starvation-inducible E; phosphate-starvation-inducible E-like protein 4841329..4841775 Rhodopseudomonas palustris DX-1 10066741 YP_004110789.1 CDS Rpdx1_4506 NC_014834.1 4842113 4842268 D PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_3081 light harvesting protein B-800-850; antenna complex subunit alpha/beta 4842113..4842268 Rhodopseudomonas palustris DX-1 10066742 YP_004110790.1 CDS Rpdx1_4507 NC_014834.1 4842281 4842484 D PFAM: antenna complex alpha/beta subunit; KEGG: pucA; light-harvesting protein B-800/850 subunit alpha; antenna complex subunit alpha/beta 4842281..4842484 Rhodopseudomonas palustris DX-1 10066743 YP_004110791.1 CDS Rpdx1_4508 NC_014834.1 4842813 4843031 D KEGG: nha:Nham_1125 hypothetical protein; hypothetical protein 4842813..4843031 Rhodopseudomonas palustris DX-1 10066744 YP_004110792.1 CDS Rpdx1_4509 NC_014834.1 4843682 4845286 R KEGG: bbt:BBta_1851 hypothetical protein; hypothetical protein complement(4843682..4845286) Rhodopseudomonas palustris DX-1 10066745 YP_004110793.1 CDS Rpdx1_4510 NC_014834.1 4845324 4846616 R SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: bja:bll7052 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; adenylosuccinate synthetase complement(4845324..4846616) Rhodopseudomonas palustris DX-1 10066746 YP_004110794.1 CDS Rpdx1_4511 NC_014834.1 4846910 4847221 R PFAM: type IV pilus assembly PilZ; KEGG: nwi:Nwi_0398 hypothetical protein; type IV pilus assembly PilZ complement(4846910..4847221) Rhodopseudomonas palustris DX-1 10066747 YP_004110795.1 CDS Rpdx1_4512 NC_014834.1 4847613 4848437 D PFAM: aldo/keto reductase; KEGG: bbt:BBta_2445 2,5-diketo-D-gluconate reductase B; aldo/keto reductase 4847613..4848437 Rhodopseudomonas palustris DX-1 10066748 YP_004110796.1 CDS Rpdx1_4513 NC_014834.1 4848882 4849358 D KEGG: nha:Nham_1120 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; ybaK/ebsC protein 4848882..4849358 Rhodopseudomonas palustris DX-1 10066749 YP_004110797.1 CDS Rpdx1_4514 NC_014834.1 4849516 4850445 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr7055 transport protein; hypothetical protein 4849516..4850445 Rhodopseudomonas palustris DX-1 10066750 YP_004110798.1 CDS Rpdx1_4515 NC_014834.1 4850468 4850881 R KEGG: bja:bll7059 hypothetical protein; hypothetical protein complement(4850468..4850881) Rhodopseudomonas palustris DX-1 10066751 YP_004110799.1 CDS Rpdx1_4516 NC_014834.1 4851116 4852021 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bra:BRADO5941 DMT family permease; hypothetical protein 4851116..4852021 Rhodopseudomonas palustris DX-1 10066752 YP_004110800.1 CDS Rpdx1_4517 NC_014834.1 4852002 4854131 R PFAM: histidine kinase HAMP region domain protein; KEGG: nha:Nham_1080 methyl-accepting chemotaxis sensory transducer; histidine kinase HAMP region domain-containing protein complement(4852002..4854131) Rhodopseudomonas palustris DX-1 10066753 YP_004110801.1 CDS Rpdx1_4518 NC_014834.1 4854448 4856640 R KEGG: bja:blr2932 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(4854448..4856640) Rhodopseudomonas palustris DX-1 10066754 YP_004110802.1 CDS Rpdx1_4519 NC_014834.1 4856772 4857743 R PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: bbt:BBta_7128 hypothetical protein; rubrerythrin complement(4856772..4857743) Rhodopseudomonas palustris DX-1 10066755 YP_004110803.1 CDS Rpdx1_4520 NC_014834.1 4857919 4859277 D KEGG: bra:BRADO5942 putative signal peptide; hypothetical protein 4857919..4859277 Rhodopseudomonas palustris DX-1 10066756 YP_004110804.1 CDS Rpdx1_4521 NC_014834.1 4859810 4860148 R KEGG: bja:blr7338 hypothetical protein; hypothetical protein complement(4859810..4860148) Rhodopseudomonas palustris DX-1 10066757 YP_004110805.1 CDS Rpdx1_4522 NC_014834.1 4860232 4861917 R KEGG: bra:BRADO5943 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache sensor containing methyl-accepting chemotaxis sensory transducer complement(4860232..4861917) Rhodopseudomonas palustris DX-1 10066758 YP_004110806.1 CDS Rpdx1_4523 NC_014834.1 4862162 4863847 R KEGG: bja:bll7062 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache sensor containing methyl-accepting chemotaxis sensory transducer complement(4862162..4863847) Rhodopseudomonas palustris DX-1 10066759 YP_004110807.1 CDS Rpdx1_4524 NC_014834.1 4864093 4865682 R KEGG: nha:Nham_1119 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; D-3-phosphoglycerate dehydrogenase complement(4864093..4865682) Rhodopseudomonas palustris DX-1 10066760 YP_004110808.1 CDS Rpdx1_4525 NC_014834.1 4865851 4867023 R KEGG: oca:OCAR_7158 phosphoserine aminotransferase; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase complement(4865851..4867023) Rhodopseudomonas palustris DX-1 10066761 YP_004110809.1 CDS Rpdx1_4526 NC_014834.1 4867273 4868574 R KEGG: bja:blr2976 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(4867273..4868574) Rhodopseudomonas palustris DX-1 10066762 YP_004110810.1 CDS Rpdx1_4527 NC_014834.1 4868552 4869076 R KEGG: bja:blr2975 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; PAS sensor protein complement(4868552..4869076) Rhodopseudomonas palustris DX-1 10066763 YP_004110811.1 CDS Rpdx1_4528 NC_014834.1 4869248 4869718 R PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_1821 hypothetical protein; N-acetyltransferase GCN5 complement(4869248..4869718) Rhodopseudomonas palustris DX-1 10066764 YP_004110812.1 CDS Rpdx1_4529 NC_014834.1 4869727 4870326 R PFAM: Glutathione S-transferase domain; KEGG: bja:bll7404 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein complement(4869727..4870326) Rhodopseudomonas palustris DX-1 10066765 YP_004110813.1 CDS Rpdx1_4530 NC_014834.1 4870374 4871165 R TIGRFAM: outer membrane insertion C-terminal signal; KEGG: oca:OCAR_7161 hypothetical protein; outer membrane insertion C-terminal signal complement(4870374..4871165) Rhodopseudomonas palustris DX-1 10066766 YP_004110814.1 CDS Rpdx1_4531 NC_014834.1 4871312 4872157 R PFAM: porin; KEGG: bra:BRADO5955 putative outer surface protein (OmpA-like); putative heat-resistant agglutinin 1; porin complement(4871312..4872157) Rhodopseudomonas palustris DX-1 10066767 YP_004110815.1 CDS Rpdx1_4532 NC_014834.1 4872476 4873741 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll7407 fosmidomycin resistance protein; major facilitator superfamily protein complement(4872476..4873741) Rhodopseudomonas palustris DX-1 10066768 YP_004110816.1 CDS Rpdx1_4533 NC_014834.1 4873912 4875264 R KEGG: bbt:BBta_1817 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase complement(4873912..4875264) Rhodopseudomonas palustris DX-1 10066769 YP_004110817.1 CDS Rpdx1_4534 NC_014834.1 4875466 4875627 R KEGG: nha:Nham_1113 hypothetical protein; hypothetical protein complement(4875466..4875627) Rhodopseudomonas palustris DX-1 10066770 YP_004110818.1 CDS Rpdx1_4535 NC_014834.1 4875791 4876930 D KEGG: bja:blr7409 L-lactate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; L-lactate dehydrogenase 4875791..4876930 Rhodopseudomonas palustris DX-1 10066771 YP_004110819.1 CDS Rpdx1_4536 NC_014834.1 4877121 4877936 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr2952 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4877121..4877936 Rhodopseudomonas palustris DX-1 10066772 YP_004110820.1 CDS Rpdx1_4537 NC_014834.1 4877964 4878593 D PFAM: protein of unknown function UPF0126; KEGG: mdi:METDI4469 hypothetical protein; hypothetical protein 4877964..4878593 Rhodopseudomonas palustris DX-1 10066773 YP_004110821.1 CDS Rpdx1_4538 NC_014834.1 4878625 4879464 R KEGG: nha:Nham_1109 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; shikimate 5-dehydrogenase complement(4878625..4879464) Rhodopseudomonas palustris DX-1 10066774 YP_004110822.1 CDS Rpdx1_4539 NC_014834.1 4879564 4881315 R PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: nha:Nham_1108 sulphate transporter; sulfate transporter complement(4879564..4881315) Rhodopseudomonas palustris DX-1 10066775 YP_004110823.1 CDS Rpdx1_4540 NC_014834.1 4881356 4881625 R PFAM: helix-turn-helix domain protein; KEGG: mno:Mnod_1557 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein complement(4881356..4881625) Rhodopseudomonas palustris DX-1 10066776 YP_004110824.1 CDS Rpdx1_4541 NC_014834.1 4881796 4883847 R KEGG: bra:BRADO5970 elongation factor G; TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; small GTP-binding protein complement(4881796..4883847) Rhodopseudomonas palustris DX-1 10066777 YP_004110825.1 CDS Rpdx1_4542 NC_014834.1 4884057 4884530 R PFAM: protein of unknown function DUF992; KEGG: bja:bll7415 hypothetical protein; hypothetical protein complement(4884057..4884530) Rhodopseudomonas palustris DX-1 10066778 YP_004110826.1 CDS Rpdx1_4543 NC_014834.1 4884754 4885275 R PFAM: protein of unknown function DUF992; KEGG: nha:Nham_1104 hypothetical protein; hypothetical protein complement(4884754..4885275) Rhodopseudomonas palustris DX-1 10066779 YP_004110827.1 CDS Rpdx1_4544 NC_014834.1 4885403 4886605 R PFAM: aminotransferase class I and II; KEGG: nha:Nham_1103 aspartate aminotransferase; class I/II aminotransferase complement(4885403..4886605) Rhodopseudomonas palustris DX-1 10066780 YP_004110828.1 CDS Rpdx1_4545 NC_014834.1 4886796 4887671 D PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO5975 putative glutathione S-transferase (GST); putative maleylacetoacetate isomerase; glutathione S-transferase domain-containing protein 4886796..4887671 Rhodopseudomonas palustris DX-1 10066781 YP_004110829.1 CDS Rpdx1_4546 NC_014834.1 4887804 4887995 D KEGG: hoh:Hoch_6606 HtrA2 peptidase; HtrA2 peptidase 4887804..4887995 Rhodopseudomonas palustris DX-1 10066782 YP_004110830.1 CDS Rpdx1_4547 NC_014834.1 4888100 4889266 D KEGG: nwi:Nwi_2982 hypothetical protein; hypothetical protein 4888100..4889266 Rhodopseudomonas palustris DX-1 10066783 YP_004110831.1 CDS Rpdx1_4548 NC_014834.1 4889479 4890327 D KEGG: oca:OCAR_7178 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4889479..4890327 Rhodopseudomonas palustris DX-1 10066784 YP_004110832.1 CDS Rpdx1_4549 NC_014834.1 4890339 4891058 R PFAM: DnaB domain protein helicase domain protein; KEGG: bja:blr5258 replicative DNA helicase; DnaB domain-containing protein helicase domain-containing protein complement(4890339..4891058) Rhodopseudomonas palustris DX-1 10066785 YP_004110833.1 CDS Rpdx1_4550 NC_014834.1 4891350 4892291 D PFAM: aldo/keto reductase; KEGG: bja:blr7422 oxidoreductase; aldo/keto reductase 4891350..4892291 Rhodopseudomonas palustris DX-1 10066786 YP_004110834.1 CDS Rpdx1_4551 NC_014834.1 4892445 4892798 D manually curated; KEGG: nwi:Nwi_2494 hypothetical protein; hypothetical protein 4892445..4892798 Rhodopseudomonas palustris DX-1 10066787 YP_004110835.1 CDS Rpdx1_4552 NC_014834.1 4892795 4893502 D KEGG: bbt:BBta_1791 putative haloacid dehalogenase/epoxide hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 4892795..4893502 Rhodopseudomonas palustris DX-1 10066788 YP_004110836.1 CDS Rpdx1_4553 NC_014834.1 4893429 4894112 R PFAM: regulatory protein TetR; KEGG: bbt:BBta_1790 TetR family transcriptional regulator; regulatory protein TetR complement(4893429..4894112) Rhodopseudomonas palustris DX-1 10066789 YP_004110837.1 CDS Rpdx1_4554 NC_014834.1 4894193 4894984 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sme:SMc01669 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4894193..4894984 Rhodopseudomonas palustris DX-1 10066790 YP_004110838.1 CDS Rpdx1_4555 NC_014834.1 4894972 4895667 R PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO5989 putative glutathione S-transferase (GST); glutathione S-transferase domain-containing protein complement(4894972..4895667) Rhodopseudomonas palustris DX-1 10066791 YP_004110839.1 CDS Rpdx1_4556 NC_014834.1 4895962 4897947 R KEGG: rme:Rmet_2149 beta-lactamase-like protein; beta-lactamase-like protein complement(4895962..4897947) Rhodopseudomonas palustris DX-1 10066792 YP_004110840.1 CDS Rpdx1_4557 NC_014834.1 4898163 4899215 D KEGG: oca:OCAR_7182 hypothetical protein; hypothetical protein 4898163..4899215 Rhodopseudomonas palustris DX-1 10066793 YP_004110841.1 CDS Rpdx1_4558 NC_014834.1 4899276 4902338 D TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: nha:Nham_2923 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein; excinuclease ABC subunit B 4899276..4902338 Rhodopseudomonas palustris DX-1 10066794 YP_004110842.1 CDS Rpdx1_4559 NC_014834.1 4902449 4903093 D PFAM: MT-A70 family protein; KEGG: mca:MCA0246 adenine-specific DNA methyltransferase; MT-A70 family protein 4902449..4903093 Rhodopseudomonas palustris DX-1 10066795 YP_004110843.1 CDS Rpdx1_4560 NC_014834.1 4903107 4904195 D KEGG: ret:RHE_CH03388 exopolysaccharide biosynthesis protein; hypothetical protein 4903107..4904195 Rhodopseudomonas palustris DX-1 10066796 YP_004110844.1 CDS Rpdx1_4561 NC_014834.1 4904195 4904617 D PFAM: PilT protein domain protein; KEGG: atc:AGR_L_3577 hypothetical protein; PilT domain-containing protein 4904195..4904617 Rhodopseudomonas palustris DX-1 10066797 YP_004110845.1 CDS Rpdx1_4562 NC_014834.1 4904691 4904936 D KEGG: vvy:VVP32 hypothetical protein; hypothetical protein 4904691..4904936 Rhodopseudomonas palustris DX-1 10066798 YP_004110846.1 CDS Rpdx1_4563 NC_014834.1 4904951 4905271 R KEGG: nha:Nham_2927 hypothetical protein; hypothetical protein complement(4904951..4905271) Rhodopseudomonas palustris DX-1 10066799 YP_004110847.1 CDS Rpdx1_4564 NC_014834.1 4905628 4906881 R TIGRFAM: acetyl-CoA acetyltransferase; KEGG: swi:Swit_1771 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase complement(4905628..4906881) Rhodopseudomonas palustris DX-1 10066800 YP_004110848.1 CDS Rpdx1_4565 NC_014834.1 4907110 4907544 D KEGG: nha:Nham_2926 hypothetical protein; hypothetical protein 4907110..4907544 Rhodopseudomonas palustris DX-1 10066801 YP_004110849.1 CDS Rpdx1_4566 NC_014834.1 4908032 4908463 D KEGG: bja:blr7434 hypothetical protein; hypothetical protein 4908032..4908463 Rhodopseudomonas palustris DX-1 10066802 YP_004110850.1 CDS Rpdx1_4567 NC_014834.1 4908671 4909105 D KEGG: nha:Nham_2929 hypothetical protein; hypothetical protein 4908671..4909105 Rhodopseudomonas palustris DX-1 10066803 YP_004110851.1 CDS Rpdx1_4568 NC_014834.1 4909288 4909449 R KEGG: bra:BRADO6012 putative signal peptide; hypothetical protein complement(4909288..4909449) Rhodopseudomonas palustris DX-1 10066804 YP_004110852.1 CDS Rpdx1_4569 NC_014834.1 4909594 4910076 R PFAM: MaoC domain protein dehydratase; KEGG: nha:Nham_3098 MaoC-like dehydratase; MaoC domain-containing protein dehydratase complement(4909594..4910076) Rhodopseudomonas palustris DX-1 10066805 YP_004110853.1 CDS Rpdx1_4570 NC_014834.1 4910085 4910552 R PFAM: MaoC domain protein dehydratase; KEGG: bra:BRADO6010 hypothetical protein; MaoC domain-containing protein dehydratase complement(4910085..4910552) Rhodopseudomonas palustris DX-1 10066806 YP_004110854.1 CDS Rpdx1_4571 NC_014834.1 4910638 4910931 D KEGG: nha:Nham_3100 hypothetical protein; hypothetical protein 4910638..4910931 Rhodopseudomonas palustris DX-1 10066807 YP_004110855.1 CDS Rpdx1_4572 NC_014834.1 4911078 4912175 R KEGG: oca:OCAR_7188 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related; GTP-binding protein YchF complement(4911078..4912175) Rhodopseudomonas palustris DX-1 10066808 YP_004110856.1 CDS Rpdx1_4573 NC_014834.1 4912292 4912903 R TIGRFAM: peptidyl-tRNA hydrolase; KEGG: oca:OCAR_7189 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(4912292..4912903) Rhodopseudomonas palustris DX-1 10066809 YP_004110857.1 CDS Rpdx1_4574 NC_014834.1 4912925 4913614 R KEGG: bja:bll7441 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like; ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 complement(4912925..4913614) Rhodopseudomonas palustris DX-1 10066810 YP_004110858.1 CDS Rpdx1_4575 NC_014834.1 4913939 4914217 R PFAM: protein of unknown function DUF526; KEGG: bra:BRADO6005 hypothetical protein; hypothetical protein complement(4913939..4914217) Rhodopseudomonas palustris DX-1 10066811 YP_004110859.1 CDS Rpdx1_4576 NC_014834.1 4914471 4915322 D KEGG: nha:Nham_3095 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 4914471..4915322 Rhodopseudomonas palustris DX-1 10066812 YP_004110860.1 CDS Rpdx1_4577 NC_014834.1 4915319 4916458 D PFAM: protein of unknown function DUF185; KEGG: bra:BRADO6003 hypothetical protein; hypothetical protein 4915319..4916458 Rhodopseudomonas palustris DX-1 10066813 YP_004110861.1 CDS Rpdx1_4578 NC_014834.1 4916455 4917228 D PFAM: protein of unknown function DUF152; KEGG: bra:BRADO6002 hypothetical protein; hypothetical protein 4916455..4917228 Rhodopseudomonas palustris DX-1 10066814 YP_004110862.1 CDS Rpdx1_4579 NC_014834.1 4917456 4918064 D KEGG: nha:Nham_3092 hypothetical protein; hypothetical protein 4917456..4918064 Rhodopseudomonas palustris DX-1 10066815 YP_004110863.1 CDS Rpdx1_4580 NC_014834.1 4918191 4919186 D TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: nwi:Nwi_2501 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 4918191..4919186 Rhodopseudomonas palustris DX-1 10066816 YP_004110864.1 CDS Rpdx1_4581 NC_014834.1 4919381 4919914 R PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: bra:BRADO6033 riboflavin synthase subunit beta; 67-dimethyl-8-ribityllumazine synthase complement(4919381..4919914) Rhodopseudomonas palustris DX-1 10066817 YP_004110865.1 CDS Rpdx1_4582 NC_014834.1 4920269 4920769 D PFAM: Protein of unknown function DUF1790; KEGG: nwi:Nwi_2513 hypothetical protein; hypothetical protein 4920269..4920769 Rhodopseudomonas palustris DX-1 10066818 YP_004110866.1 CDS Rpdx1_4583 NC_014834.1 4920974 4921807 D TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: nha:Nham_3106 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 4920974..4921807 Rhodopseudomonas palustris DX-1 10066819 YP_004110867.1 CDS Rpdx1_4584 NC_014834.1 4922087 4923475 R KEGG: bja:blr7462 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(4922087..4923475) Rhodopseudomonas palustris DX-1 10066820 YP_004110868.1 CDS Rpdx1_4585 NC_014834.1 4923637 4924359 R KEGG: nha:Nham_3137 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator complement(4923637..4924359) Rhodopseudomonas palustris DX-1 10066821 YP_004110869.1 CDS Rpdx1_4586 NC_014834.1 4924356 4924910 R KEGG: bbt:BBta_1738 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator complement(4924356..4924910) Rhodopseudomonas palustris DX-1 10066822 YP_004110870.1 CDS Rpdx1_4587 NC_014834.1 4925196 4926308 D TIGRFAM: branched-chain amino acid aminotransferase; KEGG: nha:Nham_3139 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; branched-chain amino acid aminotransferase 4925196..4926308 Rhodopseudomonas palustris DX-1 10066823 YP_004110871.1 CDS Rpdx1_4588 NC_014834.1 4926449 4928236 R KEGG: bja:blr7493 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; DNA mismatch repair protein MutL complement(4926449..4928236) Rhodopseudomonas palustris DX-1 10066824 YP_004110872.1 CDS Rpdx1_4589 NC_014834.1 4928449 4928868 R PFAM: Class I peptide chain release factor; KEGG: bja:blr7486 peptidyl-tRNA hydrolase domain protein; class I peptide chain release factor complement(4928449..4928868) Rhodopseudomonas palustris DX-1 10066825 YP_004110873.1 CDS Rpdx1_4590 NC_014834.1 4929193 4930581 R PFAM: Chromogranin/secretogranin; peptidase M16 domain protein; KEGG: bra:BRADO6071 putative Zn-dependent protease; chromogranin/secretogranin complement(4929193..4930581) Rhodopseudomonas palustris DX-1 10066826 YP_004110874.1 CDS Rpdx1_4591 NC_014834.1 4930578 4931972 R PFAM: peptidase M16 domain protein; KEGG: bja:blr7484 zinc protease; peptidase M16 domain-containing protein complement(4930578..4931972) Rhodopseudomonas palustris DX-1 10066827 YP_004110875.1 CDS Rpdx1_4592 NC_014834.1 4932156 4932872 R KEGG: bbt:BBta_1714 hypothetical protein; hypothetical protein complement(4932156..4932872) Rhodopseudomonas palustris DX-1 10066828 YP_004110876.1 CDS Rpdx1_4593 NC_014834.1 4932953 4933447 R KEGG: bja:blr7482 putative lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase complement(4932953..4933447) Rhodopseudomonas palustris DX-1 10066829 YP_004110877.1 CDS Rpdx1_4594 NC_014834.1 4933644 4936823 R TIGRFAM: isoleucyl-tRNA synthetase; KEGG: nha:Nham_3162 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(4933644..4936823) Rhodopseudomonas palustris DX-1 10066830 YP_004110878.1 CDS Rpdx1_4596 NC_014834.1 4937200 4937757 R KEGG: aav:Aave_2849 putative acetyltransferase; putative acetyltransferase complement(4937200..4937757) Rhodopseudomonas palustris DX-1 10066832 YP_004110879.1 CDS Rpdx1_4597 NC_014834.1 4937754 4938722 R KEGG: bja:blr7480 riboflavin biosynthesis bifunctional protein; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF complement(4937754..4938722) Rhodopseudomonas palustris DX-1 10066833 YP_004110880.1 CDS Rpdx1_4598 NC_014834.1 4938842 4939549 R PFAM: ribonuclease T2; KEGG: nha:Nham_3150 ribonuclease T2; ribonuclease T2 complement(4938842..4939549) Rhodopseudomonas palustris DX-1 10066834 YP_004110881.1 CDS Rpdx1_4599 NC_014834.1 4939654 4940115 R KEGG: bbt:BBta_1733 hypothetical protein; hypothetical protein complement(4939654..4940115) Rhodopseudomonas palustris DX-1 10066835 YP_004110882.1 CDS Rpdx1_4600 NC_014834.1 4940282 4940572 D KEGG: nha:Nham_3152 hypothetical protein; hypothetical protein 4940282..4940572 Rhodopseudomonas palustris DX-1 10066836 YP_004110883.1 CDS Rpdx1_4601 NC_014834.1 4940587 4941129 D KEGG: bra:BRADO6048 putative signal peptide; hypothetical protein 4940587..4941129 Rhodopseudomonas palustris DX-1 10066837 YP_004110884.1 CDS Rpdx1_4602 NC_014834.1 4941552 4941914 D KEGG: bbt:BBta_2267 hypothetical protein; hypothetical protein 4941552..4941914 Rhodopseudomonas palustris DX-1 10066838 YP_004110885.1 CDS Rpdx1_4603 NC_014834.1 4942032 4944389 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_3257 TonB-dependent receptor, plug; TonB-dependent receptor 4942032..4944389 Rhodopseudomonas palustris DX-1 10066839 YP_004110886.1 CDS Rpdx1_4604 NC_014834.1 4944511 4945065 R PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_3258 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4944511..4945065) Rhodopseudomonas palustris DX-1 10066840 YP_004110887.1 CDS Rpdx1_4605 NC_014834.1 4945087 4946739 R PFAM: MscS Mechanosensitive ion channel; KEGG: MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(4945087..4946739) Rhodopseudomonas palustris DX-1 10066841 YP_004110888.1 CDS Rpdx1_4606 NC_014834.1 4946995 4947483 R PFAM: NUDIX hydrolase; KEGG: nha:Nham_3259 NUDIX hydrolase; NUDIX hydrolase complement(4946995..4947483) Rhodopseudomonas palustris DX-1 10066842 YP_004110889.1 CDS Rpdx1_4607 NC_014834.1 4947619 4948500 D PFAM: metallophosphoesterase; KEGG: bja:bll2457 hypothetical protein; metallophosphoesterase 4947619..4948500 Rhodopseudomonas palustris DX-1 10066843 YP_004110890.1 CDS Rpdx1_4608 NC_014834.1 4948542 4949093 R manually curated; KEGG: nha:Nham_1099 hypothetical protein; hypothetical protein complement(4948542..4949093) Rhodopseudomonas palustris DX-1 10066844 YP_004110891.1 CDS Rpdx1_4609 NC_014834.1 4949357 4949572 R KEGG: nha:Nham_1098 hypothetical protein; hypothetical protein complement(4949357..4949572) Rhodopseudomonas palustris DX-1 10066845 YP_004110892.1 CDS Rpdx1_4610 NC_014834.1 4949597 4951237 R PFAM: isocitrate lyase and phosphorylmutase; KEGG: bja:blr2455 isocitrate lyase; isocitrate lyase and phosphorylmutase complement(4949597..4951237) Rhodopseudomonas palustris DX-1 10066846 YP_004110893.1 CDS Rpdx1_4611 NC_014834.1 4951454 4952896 D KEGG: nha:Nham_1096 XRE family transcriptional regulator; PFAM: Protein of unknown function DUF2083,transcriptional regulator; protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 4951454..4952896 Rhodopseudomonas palustris DX-1 10066847 YP_004110894.1 CDS Rpdx1_4612 NC_014834.1 4952893 4953363 R KEGG: bbt:BBta_4922 hypothetical protein; hypothetical protein complement(4952893..4953363) Rhodopseudomonas palustris DX-1 10066848 YP_004110895.1 CDS Rpdx1_4613 NC_014834.1 4953488 4954870 D KEGG: nha:Nham_1092 lytic murein transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; lytic murein transglycosylase 4953488..4954870 Rhodopseudomonas palustris DX-1 10066849 YP_004110896.1 CDS Rpdx1_4614 NC_014834.1 4954952 4956136 D PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO0500 putative branched-chain amino-acid ABC transporter, periplasmic binding protein; extracellular ligand-binding receptor 4954952..4956136 Rhodopseudomonas palustris DX-1 10066850 YP_004110897.1 CDS Rpdx1_4615 NC_014834.1 4956275 4957039 D KEGG: bbt:BBta_7683 putative branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4956275..4957039 Rhodopseudomonas palustris DX-1 10066851 YP_004110898.1 CDS Rpdx1_4617 NC_014834.1 4957281 4958003 D KEGG: bja:bll0885 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4957281..4958003 Rhodopseudomonas palustris DX-1 10066853 YP_004110899.1 CDS Rpdx1_4618 NC_014834.1 4958003 4958152 D hypothetical protein 4958003..4958152 Rhodopseudomonas palustris DX-1 10066854 YP_004110900.1 CDS Rpdx1_4619 NC_014834.1 4958149 4959174 D PFAM: inner-membrane translocator; KEGG: bbt:BBta_7685 putative branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 4958149..4959174 Rhodopseudomonas palustris DX-1 10066855 YP_004110901.1 CDS Rpdx1_4620 NC_014834.1 4959171 4960238 D PFAM: inner-membrane translocator; KEGG: bbt:BBta_7686 putative branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 4959171..4960238 Rhodopseudomonas palustris DX-1 10066856 YP_004110902.1 CDS Rpdx1_4621 NC_014834.1 4960615 4960920 D KEGG: sen:SACE_5236 sodium/hydrogen exchanger; sodium/hydrogen exchanger 4960615..4960920 Rhodopseudomonas palustris DX-1 10066857 YP_004110903.1 CDS Rpdx1_4622 NC_014834.1 4961166 4962266 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bbt:BBta_2240 N-ethylmaleimide reductase, FMN-linked; NADH:flavin oxidoreductase 4961166..4962266 Rhodopseudomonas palustris DX-1 10066858 YP_004110904.1 CDS Rpdx1_4624 NC_014834.1 4964350 4964679 R PFAM: Protein of unknown function DUF2160, transmembrane; KEGG: bra:BRADO1913 hypothetical protein; hypothetical protein complement(4964350..4964679) Rhodopseudomonas palustris DX-1 10066860 YP_004110905.1 CDS Rpdx1_4625 NC_014834.1 4964687 4965493 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr2440 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component complement(4964687..4965493) Rhodopseudomonas palustris DX-1 10066861 YP_004110906.1 CDS Rpdx1_4626 NC_014834.1 4965493 4966395 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2224 putative ABC transporter permease protein; binding-protein-dependent transporter inner membrane component complement(4965493..4966395) Rhodopseudomonas palustris DX-1 10066862 YP_004110907.1 CDS Rpdx1_4627 NC_014834.1 4966395 4967495 R KEGG: bra:BRADO1910 putative ATP-binding protein of sugar ABC transporter; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; ABC transporter-like protein complement(4966395..4967495) Rhodopseudomonas palustris DX-1 10066863 YP_004110908.1 CDS Rpdx1_4628 NC_014834.1 4967508 4968587 R KEGG: bja:blr2437 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein complement(4967508..4968587) Rhodopseudomonas palustris DX-1 10066864 YP_004110909.1 CDS Rpdx1_4629 NC_014834.1 4968584 4970119 R KEGG: bra:BRADO1908 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase complement(4968584..4970119) Rhodopseudomonas palustris DX-1 10066865 YP_004110910.1 CDS Rpdx1_4630 NC_014834.1 4970315 4971112 R KEGG: bja:blr2433 transcriptional regulatory protein; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(4970315..4971112) Rhodopseudomonas palustris DX-1 10066866 YP_004110911.1 CDS Rpdx1_4631 NC_014834.1 4971383 4972000 R PFAM: flavin reductase domain protein FMN-binding; KEGG: bja:blr2425 hypothetical protein; flavin reductase FMN-binding protein complement(4971383..4972000) Rhodopseudomonas palustris DX-1 10066867 YP_004110912.1 CDS Rpdx1_4632 NC_014834.1 4972018 4972632 R PFAM: regulatory protein TetR; KEGG: nha:Nham_1083 TetR family transcriptional regulator; regulatory protein TetR complement(4972018..4972632) Rhodopseudomonas palustris DX-1 10066868 YP_004110913.1 CDS Rpdx1_4633 NC_014834.1 4972650 4975787 R PFAM: acriflavin resistance protein; KEGG: bja:blr2423 cation efflux system protein; acriflavin resistance protein complement(4972650..4975787) Rhodopseudomonas palustris DX-1 10066869 YP_004110914.1 CDS Rpdx1_4634 NC_014834.1 4975809 4976915 R KEGG: bbt:BBta_2214 putative component of multidrug efflux system; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(4975809..4976915) Rhodopseudomonas palustris DX-1 10066870 YP_004110915.1 CDS Rpdx1_4635 NC_014834.1 4977006 4979627 R KEGG: bbt:BBta_4427 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; multi-sensor hybrid histidine kinase complement(4977006..4979627) Rhodopseudomonas palustris DX-1 10066871 YP_004110916.1 CDS Rpdx1_4636 NC_014834.1 4980005 4980220 D PFAM: CsbD family protein; KEGG: nha:Nham_1079 CsbD-like; CsbD family protein 4980005..4980220 Rhodopseudomonas palustris DX-1 10066872 YP_004110917.1 CDS Rpdx1_4637 NC_014834.1 4980309 4981895 R TIGRFAM: gamma-glutamyltransferase; KEGG: bra:BRADO1881 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(4980309..4981895) Rhodopseudomonas palustris DX-1 10066873 YP_004110918.1 CDS Rpdx1_4638 NC_014834.1 4982141 4982356 D PFAM: SlyX family protein; KEGG: bja:bsl2402 hypothetical protein; SlyX family protein 4982141..4982356 Rhodopseudomonas palustris DX-1 10066874 YP_004110919.1 CDS Rpdx1_4639 NC_014834.1 4982511 4984049 R PFAM: AMP-dependent synthetase and ligase; KEGG: cak:Caul_0814 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(4982511..4984049) Rhodopseudomonas palustris DX-1 10066875 YP_004110920.1 CDS Rpdx1_4640 NC_014834.1 4984377 4985042 R KEGG: bja:bll2244 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator complement(4984377..4985042) Rhodopseudomonas palustris DX-1 10066876 YP_004110921.1 CDS Rpdx1_4641 NC_014834.1 4985187 4985600 R KEGG: bra:BRADO6425 hypothetical protein; hypothetical protein complement(4985187..4985600) Rhodopseudomonas palustris DX-1 10066877 YP_004110922.1 CDS Rpdx1_4642 NC_014834.1 4985735 4986583 D KEGG: bja:blr7890 putative beta-lactamase; putative beta-lactamase 4985735..4986583 Rhodopseudomonas palustris DX-1 10066878 YP_004110923.1 CDS Rpdx1_4643 NC_014834.1 4986693 4987535 D KEGG: bja:blr7891 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; ureidoglycolate lyase 4986693..4987535 Rhodopseudomonas palustris DX-1 10066879 YP_004110924.1 CDS Rpdx1_4644 NC_014834.1 4987717 4988334 D PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO6428 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 4987717..4988334 Rhodopseudomonas palustris DX-1 10066880 YP_004110925.1 CDS Rpdx1_4645 NC_014834.1 4988346 4988897 R KEGG: nha:Nham_0663 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase complement(4988346..4988897) Rhodopseudomonas palustris DX-1 10066881 YP_004110926.1 CDS Rpdx1_4646 NC_014834.1 4988941 4989489 R KEGG: cja:CJA_0504 glycosyl transferase, putative, gt4E; glycosyl transferase family protein complement(4988941..4989489) Rhodopseudomonas palustris DX-1 10066882 YP_004110927.1 CDS Rpdx1_4647 NC_014834.1 4989678 4990262 R KEGG: bja:blr1408 hypothetical protein; hypothetical protein complement(4989678..4990262) Rhodopseudomonas palustris DX-1 10066883 YP_004110928.1 CDS Rpdx1_4648 NC_014834.1 4990597 4991100 D PFAM: GCN5-related N-acetyltransferase; KEGG: avi:Avi_2379 acetyltransferase; N-acetyltransferase GCN5 4990597..4991100 Rhodopseudomonas palustris DX-1 10066884 YP_004110929.1 CDS Rpdx1_4649 NC_014834.1 4997545 4999578 D PFAM: Peptidase M23; KEGG: bbt:BBta_1196 putative metalloendopeptidase; peptidase M23 4997545..4999578 Rhodopseudomonas palustris DX-1 10066890 YP_004110930.1 CDS Rpdx1_4650 NC_014834.1 4999729 5001357 D PFAM: NHL repeat containing protein; KEGG: bja:bll1406 hypothetical protein; NHL repeat containing protein 4999729..5001357 Rhodopseudomonas palustris DX-1 10066891 YP_004110931.1 CDS Rpdx1_4651 NC_014834.1 5001508 5004147 R TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: bbt:BBta_1195 chaperone; SMART: AAA ATPase; ATP-dependent chaperone ClpB complement(5001508..5004147) Rhodopseudomonas palustris DX-1 10066892 YP_004110932.1 CDS Rpdx1_4652 NC_014834.1 5004373 5005161 D PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: nha:Nham_0680 hypothetical protein; MOSC domain-containing protein 5004373..5005161 Rhodopseudomonas palustris DX-1 10066893 YP_004110933.1 CDS Rpdx1_4653 NC_014834.1 5005219 5005965 R KEGG: oca:OCAR_4778 putative conserved hypothetical protein; hypothetical protein complement(5005219..5005965) Rhodopseudomonas palustris DX-1 10066894 YP_004110934.1 CDS Rpdx1_4654 NC_014834.1 5006188 5006883 R KEGG: nwi:Nwi_0586 methionine biosynthesis MetW; TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; methionine biosynthesis protein MetW complement(5006188..5006883) Rhodopseudomonas palustris DX-1 10066895 YP_004110935.1 CDS Rpdx1_4655 NC_014834.1 5006886 5008085 R TIGRFAM: homoserine O-acetyltransferase; KEGG: bbt:BBta_1186 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase complement(5006886..5008085) Rhodopseudomonas palustris DX-1 10066896 YP_004110936.1 CDS Rpdx1_4656 NC_014834.1 5008576 5009421 D PFAM: Chorismate mutase, type II; KEGG: bja:bll1398 hypothetical protein; chorismate mutase 5008576..5009421 Rhodopseudomonas palustris DX-1 10066897 YP_004110937.1 CDS Rpdx1_4657 NC_014834.1 5009465 5010562 D KEGG: bbt:BBta_1183 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase 5009465..5010562 Rhodopseudomonas palustris DX-1 10066898 YP_004110938.1 CDS Rpdx1_4658 NC_014834.1 5010559 5011500 D KEGG: nwi:Nwi_0582 cyclohexadienyl dehydrogenase; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 5010559..5011500 Rhodopseudomonas palustris DX-1 10066899 YP_004110939.1 CDS Rpdx1_4659 NC_014834.1 5011651 5012631 R PFAM: Mg2 transporter protein CorA family protein; KEGG: nha:Nham_0762 Mg2+ transporter protein, CorA-like; Mg2 transporter protein CorA family protein complement(5011651..5012631) Rhodopseudomonas palustris DX-1 10066900 YP_004110940.1 CDS Rpdx1_4660 NC_014834.1 5012978 5013664 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: oca:OCAR_6915 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 5012978..5013664 Rhodopseudomonas palustris DX-1 10066901 YP_004110941.1 CDS Rpdx1_4661 NC_014834.1 5013955 5015025 R PFAM: Extensin family protein; KEGG: nha:Nham_0760 extensin-like; extensin family protein complement(5013955..5015025) Rhodopseudomonas palustris DX-1 10066902 YP_004110942.1 CDS Rpdx1_4662 NC_014834.1 5015143 5016771 D PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO2140 putative acyl-CoA synthetase; AMP-dependent synthetase and ligase 5015143..5016771 Rhodopseudomonas palustris DX-1 10066903 YP_004110943.1 CDS Rpdx1_4663 NC_014834.1 5017006 5017845 D KEGG: nha:Nham_0755 hypothetical protein; hypothetical protein 5017006..5017845 Rhodopseudomonas palustris DX-1 10066904 YP_004110944.1 CDS Rpdx1_4664 NC_014834.1 5017894 5018193 R KEGG: dma:DMR_10690 hypothetical protein; hypothetical protein complement(5017894..5018193) Rhodopseudomonas palustris DX-1 10066905 YP_004110945.1 CDS Rpdx1_4665 NC_014834.1 5018278 5018721 R KEGG: rce:RC1_3901 hypothetical protein; hypothetical protein complement(5018278..5018721) Rhodopseudomonas palustris DX-1 10066906 YP_004110946.1 CDS Rpdx1_4666 NC_014834.1 5018718 5019137 R KEGG: pzu:PHZ_c2683 hypothetical protein; hypothetical protein complement(5018718..5019137) Rhodopseudomonas palustris DX-1 10066907 YP_004110947.1 CDS Rpdx1_4667 NC_014834.1 5019134 5019697 R KEGG: azl:AZL_d04490 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(5019134..5019697) Rhodopseudomonas palustris DX-1 10066908 YP_004110948.1 CDS Rpdx1_4668 NC_014834.1 5019765 5020112 R KEGG: dse:Dsec_GM24424 GM24424 gene product from transcript GM24424-RA; hypothetical protein complement(5019765..5020112) Rhodopseudomonas palustris DX-1 10066909 YP_004110949.1 CDS Rpdx1_4669 NC_014834.1 5020654 5022345 D KEGG: bra:BRADO2557 putative methyl-accepting chemotaxis receptor/sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache sensor containing methyl-accepting chemotaxis sensory transducer 5020654..5022345 Rhodopseudomonas palustris DX-1 10066910 YP_004110950.1 CDS Rpdx1_4670 NC_014834.1 5022567 5024162 D KEGG: bja:bll5850 hypothetical protein; hypothetical protein 5022567..5024162 Rhodopseudomonas palustris DX-1 10066911 YP_004110951.1 CDS Rpdx1_4671 NC_014834.1 5024152 5025387 D KEGG: bja:bll5849 hypothetical protein; hypothetical protein 5024152..5025387 Rhodopseudomonas palustris DX-1 10066912 YP_004110952.1 CDS Rpdx1_4672 NC_014834.1 5025384 5026862 D PFAM: Pyridoxal-dependent decarboxylase; KEGG: nha:Nham_1334 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 5025384..5026862 Rhodopseudomonas palustris DX-1 10066913 YP_004110953.1 CDS Rpdx1_4673 NC_014834.1 5026943 5027770 R PFAM: metallophosphoesterase; KEGG: nha:Nham_3527 hypothetical protein; metallophosphoesterase complement(5026943..5027770) Rhodopseudomonas palustris DX-1 10066914 YP_004110954.1 CDS Rpdx1_4674 NC_014834.1 5027772 5028365 R KEGG: bra:BRADO1138 antifreeze protein, type I: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(5027772..5028365) Rhodopseudomonas palustris DX-1 10066915 YP_004110955.1 CDS Rpdx1_4675 NC_014834.1 5028764 5029228 D KEGG: bra:BRADO4648 hypothetical protein; hypothetical protein 5028764..5029228 Rhodopseudomonas palustris DX-1 10066917 YP_004110956.1 CDS Rpdx1_4676 NC_014834.1 5029241 5029420 R KEGG: aau:AAur_pTC20031 cadmium-translocating P-type ATPase; cadmium-translocating P-type ATPase complement(5029241..5029420) Rhodopseudomonas palustris DX-1 10066918 YP_004110957.1 CDS Rpdx1_4677 NC_014834.1 5029503 5030048 D KEGG: hoh:Hoch_3149 ATP-dependent DNA helicase, RecQ family; RecQ family ATP-dependent DNA helicase 5029503..5030048 Rhodopseudomonas palustris DX-1 10066919 YP_004110958.1 CDS Rpdx1_4678 NC_014834.1 5030265 5030654 R KEGG: bbt:BBta_6071 putative rhodanese-related sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein complement(5030265..5030654) Rhodopseudomonas palustris DX-1 10066920 YP_004110959.1 CDS Rpdx1_4679 NC_014834.1 5030677 5031153 R KEGG: sme:SMc01259 hypothetical protein; hypothetical protein complement(5030677..5031153) Rhodopseudomonas palustris DX-1 10066921 YP_004110960.1 CDS Rpdx1_4680 NC_014834.1 5031262 5031567 R KEGG: tgr:Tgr7_3247 hypothetical protein; hypothetical protein complement(5031262..5031567) Rhodopseudomonas palustris DX-1 10066922 YP_004110961.1 CDS Rpdx1_4681 NC_014834.1 5031564 5034653 R KEGG: slt:Slit_1971 heavy metal efflux pump, CzcA family; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump complement(5031564..5034653) Rhodopseudomonas palustris DX-1 10066923 YP_004110962.1 CDS Rpdx1_4682 NC_014834.1 5034654 5035760 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rcu:RCOM_0389620 Cobalt-zinc-cadmium resistance protein czcB, putative; RND family efflux transporter MFP subunit complement(5034654..5035760) Rhodopseudomonas palustris DX-1 10066924 YP_004110963.1 CDS Rpdx1_4683 NC_014834.1 5035977 5037299 R KEGG: bja:blr2976 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(5035977..5037299) Rhodopseudomonas palustris DX-1 10066925 YP_004110964.1 CDS Rpdx1_4684 NC_014834.1 5037262 5037798 R TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: azl:AZL_007490 chemotaxis sensory transducer; SMART: PAS domain containing protein; PAS sensor protein complement(5037262..5037798) Rhodopseudomonas palustris DX-1 10066926 YP_004110965.1 CDS Rpdx1_4685 NC_014834.1 5037966 5039288 R KEGG: bja:blr2976 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(5037966..5039288) Rhodopseudomonas palustris DX-1 10066927 YP_004110966.1 CDS Rpdx1_4686 NC_014834.1 5039251 5039784 R KEGG: azl:AZL_007490 chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS sensor protein complement(5039251..5039784) Rhodopseudomonas palustris DX-1 10066928 YP_004110967.1 CDS Rpdx1_4687 NC_014834.1 5039990 5041123 R TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: oca:OCAR_6982 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; A/G-specific adenine glycosylase complement(5039990..5041123) Rhodopseudomonas palustris DX-1 10066929 YP_004110968.1 CDS Rpdx1_4688 NC_014834.1 5041152 5041631 D PFAM: protein of unknown function DUF721; KEGG: nha:Nham_3228 hypothetical protein; hypothetical protein 5041152..5041631 Rhodopseudomonas palustris DX-1 10066930 YP_004110969.1 CDS Rpdx1_4689 NC_014834.1 5041776 5042450 D PFAM: DSBA oxidoreductase; KEGG: bra:BRADO2001 hypothetical protein; DSBA oxidoreductase 5041776..5042450 Rhodopseudomonas palustris DX-1 10066931 YP_004110970.1 CDS Rpdx1_4690 NC_014834.1 5043319 5044581 D KEGG: xau:Xaut_0814 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 5043319..5044581 Rhodopseudomonas palustris DX-1 10066932 YP_004110971.1 CDS Rpdx1_4691 NC_014834.1 5044590 5045744 D KEGG: pla:Plav_0387 hypothetical protein; hypothetical protein 5044590..5045744 Rhodopseudomonas palustris DX-1 10066933 YP_004110972.1 CDS Rpdx1_4692 NC_014834.1 5045975 5049439 D KEGG: bja:bll2496 chromosome segregation protein; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; chromosome segregation protein SMC 5045975..5049439 Rhodopseudomonas palustris DX-1 10066934 YP_004110973.1 CDS Rpdx1_4693 NC_014834.1 5049538 5050515 D PFAM: Ribosomal small subunit Rsm22; KEGG: nha:Nham_3231 methyltransferase type 12; Ribosomal small subunit Rsm22 5049538..5050515 Rhodopseudomonas palustris DX-1 10066935 YP_004110974.1 CDS Rpdx1_4694 NC_014834.1 5050631 5051182 D PFAM: LemA family protein; KEGG: oca:OCAR_6988 LemA; LemA family protein 5050631..5051182 Rhodopseudomonas palustris DX-1 10066936 YP_004110975.1 CDS Rpdx1_4695 NC_014834.1 5051342 5052520 D PFAM: peptidase M48 Ste24p; KEGG: bbt:BBta_2314 putative protease HtpX; peptidase M48 Ste24p 5051342..5052520 Rhodopseudomonas palustris DX-1 10066937 YP_004110976.1 CDS Rpdx1_4696 NC_014834.1 5052700 5053473 D KEGG: bja:bll2492 hypothetical protein; hypothetical protein 5052700..5053473 Rhodopseudomonas palustris DX-1 10066938 YP_004110977.1 CDS Rpdx1_4697 NC_014834.1 5053532 5054197 D KEGG: nha:Nham_3236 hypothetical protein; hypothetical protein 5053532..5054197 Rhodopseudomonas palustris DX-1 10066939 YP_004110978.1 CDS Rpdx1_4698 NC_014834.1 5054417 5054962 R KEGG: nwi:Nwi_2613 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase complement(5054417..5054962) Rhodopseudomonas palustris DX-1 10066940 YP_004110979.1 CDS Rpdx1_4699 NC_014834.1 5055116 5057275 R KEGG: bbt:BBta_2309 anthranilate synthase; TIGRFAM: anthranilate synthase; glutamine amidotransferase of anthranilate synthase; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; glutamine amidotransferase class-I; anthranilate synthase complement(5055116..5057275) Rhodopseudomonas palustris DX-1 10066941 YP_004110980.1 CDS Rpdx1_4700 NC_014834.1 5057571 5057765 D PFAM: YcfA family protein; KEGG: dae:Dtox_3658 YcfA family protein; hypothetical protein 5057571..5057765 Rhodopseudomonas palustris DX-1 10066942 YP_004110981.1 CDS Rpdx1_4701 NC_014834.1 5057765 5057971 D PFAM: protein of unknown function UPF0150; KEGG: mpo:Mpop_3129 protein of unknown function UPF0150; hypothetical protein 5057765..5057971 Rhodopseudomonas palustris DX-1 10066943 YP_004110982.1 CDS Rpdx1_4702 NC_014834.1 5058047 5058667 R PFAM: Methyltransferase type 11; KEGG: rsq:Rsph17025_3983 hypothetical protein; type 11 methyltransferase complement(5058047..5058667) Rhodopseudomonas palustris DX-1 10066944 YP_004110983.1 CDS Rpdx1_4703 NC_014834.1 5058691 5060013 R PFAM: ABC-1 domain protein; KEGG: ABC-1 domain-containing protein; ABC-1 domain-containing protein complement(5058691..5060013) Rhodopseudomonas palustris DX-1 10066945 YP_004110984.1 CDS Rpdx1_4704 NC_014834.1 5060473 5060649 D KEGG: bbt:BBta_1659 hypothetical protein; hypothetical protein 5060473..5060649 Rhodopseudomonas palustris DX-1 10066946 YP_004110985.1 CDS Rpdx1_4705 NC_014834.1 5060670 5060888 R PFAM: PhnA protein; KEGG: rhi:NGR_c07170 PhnA-like protein; PhnA protein complement(5060670..5060888) Rhodopseudomonas palustris DX-1 10066947 YP_004110986.1 CDS Rpdx1_4706 NC_014834.1 5061024 5061713 R PFAM: OmpW family protein; KEGG: bbt:BBta_0946 putative outer membrane protein precursor of unknown function; OmpW family protein complement(5061024..5061713) Rhodopseudomonas palustris DX-1 10066948 YP_004110987.1 CDS Rpdx1_4707 NC_014834.1 5061942 5062202 R KEGG: bja:bsr1310 hypothetical protein; hypothetical protein complement(5061942..5062202) Rhodopseudomonas palustris DX-1 10066949 YP_004110988.1 CDS Rpdx1_4708 NC_014834.1 5062387 5064297 R PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0943 putative propionate--CoA ligase; AMP-dependent synthetase and ligase complement(5062387..5064297) Rhodopseudomonas palustris DX-1 10066950 YP_004110989.1 CDS Rpdx1_4709 NC_014834.1 5064478 5065236 R KEGG: bbt:BBta_0942 hypothetical protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; hypothetical protein complement(5064478..5065236) Rhodopseudomonas palustris DX-1 10066951 YP_004110990.1 CDS Rpdx1_4710 NC_014834.1 5065472 5066275 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr1304 dehydrogenase; short-chain dehydrogenase/reductase SDR complement(5065472..5066275) Rhodopseudomonas palustris DX-1 10066952 YP_004110991.1 CDS Rpdx1_4711 NC_014834.1 5066374 5068149 R KEGG: azc:AZC_3721 elongator protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein complement(5066374..5068149) Rhodopseudomonas palustris DX-1 10066953 YP_004110992.1 CDS Rpdx1_4712 NC_014834.1 5068298 5068672 R PFAM: Domain of unknown function DUF1850; KEGG: bja:blr1303 hypothetical protein; hypothetical protein complement(5068298..5068672) Rhodopseudomonas palustris DX-1 10066954 YP_004110993.1 CDS Rpdx1_4713 NC_014834.1 5068669 5070789 R KEGG: bra:BRADO6597 C4-dicarboxylate transporter; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter complement(5068669..5070789) Rhodopseudomonas palustris DX-1 10066955 YP_004110994.1 CDS Rpdx1_4714 NC_014834.1 5070940 5071887 R TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:blr1301 immunogenic protein precursor; TAXI family TRAP transporter solute receptor complement(5070940..5071887) Rhodopseudomonas palustris DX-1 10066956 YP_004110995.1 CDS Rpdx1_4715 NC_014834.1 5072039 5073286 D PFAM: major facilitator superfamily MFS_1; KEGG: azl:AZL_009150 major facilitator superfamily MFS-1; major facilitator superfamily protein 5072039..5073286 Rhodopseudomonas palustris DX-1 10066957 YP_004110996.1 CDS Rpdx1_4716 NC_014834.1 5073332 5073694 R KEGG: rsq:Rsph17025_3337 hypothetical protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver complement(5073332..5073694) Rhodopseudomonas palustris DX-1 10066958 YP_004110997.1 CDS Rpdx1_4717 NC_014834.1 5073698 5074702 R PFAM: PAS fold-4 domain protein; HWE histidine kinase; KEGG: rsp:RSP_1628 sensor histidine protein kinase; signal transduction histidine kinase complement(5073698..5074702) Rhodopseudomonas palustris DX-1 10066959 YP_004110998.1 CDS Rpdx1_4718 NC_014834.1 5074850 5076451 D KEGG: rce:RC1_0246 alkaline phosphatase D; alkaline phosphatase 5074850..5076451 Rhodopseudomonas palustris DX-1 10066960 YP_004110999.1 CDS Rpdx1_4719 NC_014834.1 5076607 5077614 D PFAM: conserved hypothetical protein; KEGG: vei:Veis_4511 hypothetical protein; hypothetical protein 5076607..5077614 Rhodopseudomonas palustris DX-1 10066961 YP_004111000.1 CDS Rpdx1_4720 NC_014834.1 5077854 5079068 D KEGG: bja:blr0402 two-component response regulator; PFAM: EAL domain protein; response regulator receiver; SMART: EAL domain protein; response regulator receiver modulated diguanylate phosphodiesterase 5077854..5079068 Rhodopseudomonas palustris DX-1 10066962 YP_004111001.1 CDS Rpdx1_4721 NC_014834.1 5079097 5079594 R KEGG: bja:blr1300 hypothetical protein; hypothetical protein complement(5079097..5079594) Rhodopseudomonas palustris DX-1 10066963 YP_004111002.1 CDS Rpdx1_4722 NC_014834.1 5079838 5080140 D KEGG: bja:bll1299 hypothetical protein; hypothetical protein 5079838..5080140 Rhodopseudomonas palustris DX-1 10066964 YP_004111003.1 CDS Rpdx1_4723 NC_014834.1 5080160 5081371 R KEGG: nwi:Nwi_0278 hypothetical protein; hypothetical protein complement(5080160..5081371) Rhodopseudomonas palustris DX-1 10066965 YP_004111004.1 CDS Rpdx1_4724 NC_014834.1 5081503 5082129 R PFAM: NUDIX hydrolase; KEGG: bja:blr1297 hypothetical protein; NUDIX hydrolase complement(5081503..5082129) Rhodopseudomonas palustris DX-1 10066966 YP_004111005.1 CDS Rpdx1_4725 NC_014834.1 5082216 5082641 D PFAM: thioesterase superfamily protein; KEGG: bja:bll1296 hypothetical protein; thioesterase superfamily protein 5082216..5082641 Rhodopseudomonas palustris DX-1 10066967 YP_004111006.1 CDS Rpdx1_4726 NC_014834.1 5082657 5083403 R KEGG: mrd:Mrad2831_3556 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(5082657..5083403) Rhodopseudomonas palustris DX-1 10066968 YP_004111007.1 CDS Rpdx1_4727 NC_014834.1 5083737 5084105 R KEGG: bbt:BBta_3939 putative two-component response regulatory protein, response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(5083737..5084105) Rhodopseudomonas palustris DX-1 10066969 YP_004111008.1 CDS Rpdx1_4728 NC_014834.1 5084507 5085994 R KEGG: bbt:BBta_6050 putative sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase complement(5084507..5085994) Rhodopseudomonas palustris DX-1 10066970 YP_004111009.1 CDS Rpdx1_4729 NC_014834.1 5086378 5086572 R PFAM: protein of unknown function DUF329; KEGG: nwi:Nwi_0276 zinc-binding protein; hypothetical protein complement(5086378..5086572) Rhodopseudomonas palustris DX-1 10066972 YP_004111010.1 CDS Rpdx1_4730 NC_014834.1 5086550 5087173 R KEGG: bja:blr1259 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein; maf protein complement(5086550..5087173) Rhodopseudomonas palustris DX-1 10066973 YP_004111011.1 CDS Rpdx1_4731 NC_014834.1 5087270 5088559 R KEGG: hoh:Hoch_1691 SMC domain protein; SMC domain-containing protein complement(5087270..5088559) Rhodopseudomonas palustris DX-1 10066974 YP_004111012.1 CDS Rpdx1_4732 NC_014834.1 5088747 5089214 R KEGG: bra:BRADO6635 putative arsenate reductase (ArsC-like); PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein-tyrosine phosphatase, low molecular weight complement(5088747..5089214) Rhodopseudomonas palustris DX-1 10066975 YP_004111013.1 CDS Rpdx1_4733 NC_014834.1 5089270 5089761 R PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_0248 hypothetical protein; hypothetical protein complement(5089270..5089761) Rhodopseudomonas palustris DX-1 10066976 YP_004111014.1 CDS Rpdx1_4734 NC_014834.1 5089758 5091053 R TIGRFAM: histidinol dehydrogenase; KEGG: bja:blr1256 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase complement(5089758..5091053) Rhodopseudomonas palustris DX-1 10066977 YP_004111015.1 CDS Rpdx1_4735 NC_014834.1 5091183 5091632 R KEGG: bra:BRADO6638 hypothetical protein; hypothetical protein complement(5091183..5091632) Rhodopseudomonas palustris DX-1 10066978 YP_004111016.1 CDS Rpdx1_4736 NC_014834.1 5091652 5092941 R KEGG: nha:Nham_0285 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(5091652..5092941) Rhodopseudomonas palustris DX-1 10066979 YP_004111017.1 CDS Rpdx1_4737 NC_014834.1 5093100 5093390 R KEGG: nha:Nham_0415 hypothetical protein; hypothetical protein complement(5093100..5093390) Rhodopseudomonas palustris DX-1 10066980 YP_004111018.1 CDS Rpdx1_4738 NC_014834.1 5093630 5093926 D KEGG: hla:Hlac_0776 hypothetical protein; hypothetical protein 5093630..5093926 Rhodopseudomonas palustris DX-1 10066981 YP_004111019.1 CDS Rpdx1_4739 NC_014834.1 5094132 5094341 R manually curated; KEGG: bra:BRADO6641 hypothetical protein; hypothetical protein complement(5094132..5094341) Rhodopseudomonas palustris DX-1 10066982 YP_004111020.1 CDS Rpdx1_4740 NC_014834.1 5094416 5094862 D KEGG: reu:Reut_B5593 hypothetical protein; hypothetical protein 5094416..5094862 Rhodopseudomonas palustris DX-1 10066983 YP_004111021.1 CDS Rpdx1_4741 NC_014834.1 5095294 5096460 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll6791 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(5095294..5096460) Rhodopseudomonas palustris DX-1 10066985 YP_004111022.1 CDS Rpdx1_4742 NC_014834.1 5096669 5097526 D KEGG: bja:blr6797 putative citrate lyase; PFAM: HpcH/HpaI aldolase; citryl-coA lyase 5096669..5097526 Rhodopseudomonas palustris DX-1 10066986 YP_004111023.1 CDS Rpdx1_4743 NC_014834.1 5097542 5098606 R PFAM: IMP dehydrogenase/GMP reductase; KEGG: azl:AZL_e03110 GMP reductase; IMP dehydrogenase/GMP reductase complement(5097542..5098606) Rhodopseudomonas palustris DX-1 10066987 YP_004111024.1 CDS Rpdx1_4744 NC_014834.1 5098673 5099578 D TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: oca:OCAR_5052 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 5098673..5099578 Rhodopseudomonas palustris DX-1 10066988 YP_004111025.1 CDS Rpdx1_4745 NC_014834.1 5099579 5100331 R KEGG: bra:BRADO2399 putative signal peptide; PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); nuclease complement(5099579..5100331) Rhodopseudomonas palustris DX-1 10066989 YP_004111026.1 CDS Rpdx1_4746 NC_014834.1 5100489 5101370 D PFAM: thioesterase superfamily protein; KEGG: bja:blr7284 hypothetical protein; thioesterase superfamily protein 5100489..5101370 Rhodopseudomonas palustris DX-1 10066990 YP_004111027.1 CDS Rpdx1_4747 NC_014834.1 5101561 5102763 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bra:BRADO2426 putative diguanylate cyclase (GGDEF); SMART: GGDEF domain containing protein; diguanylate cyclase 5101561..5102763 Rhodopseudomonas palustris DX-1 10066991 YP_004111028.1 CDS Rpdx1_4748 NC_014834.1 5102764 5103960 R KEGG: pna:Pnap_3569 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase complement(5102764..5103960) Rhodopseudomonas palustris DX-1 10066992 YP_004111029.1 CDS Rpdx1_4749 NC_014834.1 5103957 5105372 R KEGG: cak:Caul_1955 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; phosphate acetyltransferase complement(5103957..5105372) Rhodopseudomonas palustris DX-1 10066993 YP_004111030.1 CDS Rpdx1_4750 NC_014834.1 5105397 5106158 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bte:BTH_II1698 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR complement(5105397..5106158) Rhodopseudomonas palustris DX-1 10066994 YP_004111031.1 CDS Rpdx1_4751 NC_014834.1 5106241 5107110 R PFAM: protein of unknown function DUF344; KEGG: rfr:Rfer_4046 hypothetical protein; hypothetical protein complement(5106241..5107110) Rhodopseudomonas palustris DX-1 10066995 YP_004111032.1 CDS Rpdx1_4752 NC_014834.1 5107483 5108865 D KEGG: nha:Nham_2580 hypothetical protein; hypothetical protein 5107483..5108865 Rhodopseudomonas palustris DX-1 10066996 YP_004111033.1 CDS Rpdx1_4753 NC_014834.1 5108982 5109392 R PFAM: BA14K family protein; KEGG: nha:Nham_0272 hypothetical protein; BA14K family protein complement(5108982..5109392) Rhodopseudomonas palustris DX-1 10066997 YP_004111034.1 CDS Rpdx1_4754 NC_014834.1 5109868 5112090 D KEGG: ppd:Ppro_3271 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase 5109868..5112090 Rhodopseudomonas palustris DX-1 10066998 YP_004111035.1 CDS Rpdx1_4755 NC_014834.1 5112186 5113493 R PFAM: Protein of unknown function DUF2254, membrane; KEGG: mch:Mchl_3348 formate C-acetyltransferase glycine radical; hypothetical protein complement(5112186..5113493) Rhodopseudomonas palustris DX-1 10066999 YP_004111036.1 CDS Rpdx1_4756 NC_014834.1 5113801 5115357 R TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bja:blr2591 serine protease DO-like protease; SMART: PDZ/DHR/GLGF domain protein; protease Do complement(5113801..5115357) Rhodopseudomonas palustris DX-1 10067000 YP_004111037.1 CDS Rpdx1_4757 NC_014834.1 5115596 5116084 R KEGG: bid:Bind_2062 hypothetical protein; hypothetical protein complement(5115596..5116084) Rhodopseudomonas palustris DX-1 10067001 YP_004111038.1 CDS Rpdx1_4758 NC_014834.1 5116193 5116477 R KEGG: nha:Nham_1414 hypothetical protein; hypothetical protein complement(5116193..5116477) Rhodopseudomonas palustris DX-1 10067002 YP_004111039.1 CDS Rpdx1_4759 NC_014834.1 5116637 5118202 D KEGG: bja:blr6155 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5116637..5118202 Rhodopseudomonas palustris DX-1 10067003 YP_004111040.1 CDS Rpdx1_4760 NC_014834.1 5118186 5119277 D PFAM: inner-membrane translocator; KEGG: bra:BRADO1746 ABC transporter permease; inner-membrane translocator 5118186..5119277 Rhodopseudomonas palustris DX-1 10067004 YP_004111041.1 CDS Rpdx1_4761 NC_014834.1 5119264 5120181 D PFAM: inner-membrane translocator; KEGG: bbt:BBta_2058 ABC transporter permease; inner-membrane translocator 5119264..5120181 Rhodopseudomonas palustris DX-1 10067005 YP_004111042.1 CDS Rpdx1_4762 NC_014834.1 5120260 5121348 D PFAM: basic membrane lipoprotein; KEGG: bbt:BBta_2057 putative ABC transporter (substrate-binding protein); basic membrane lipoprotein 5120260..5121348 Rhodopseudomonas palustris DX-1 10067006 YP_004111043.1 CDS Rpdx1_4763 NC_014834.1 5121563 5122528 R SMART: PDZ/DHR/GLGF domain protein; KEGG: nha:Nham_3491 PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein complement(5121563..5122528) Rhodopseudomonas palustris DX-1 10067007 YP_004111044.1 CDS Rpdx1_4765 NC_014834.1 5123174 5124439 D KEGG: oca:OCAR_5669 LpsH; hypothetical protein 5123174..5124439 Rhodopseudomonas palustris DX-1 10067009 YP_004111045.1 CDS Rpdx1_4766 NC_014834.1 5124468 5125451 D KEGG: bid:Bind_1866 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 5124468..5125451 Rhodopseudomonas palustris DX-1 10067010 YP_004111046.1 CDS Rpdx1_4767 NC_014834.1 5125678 5126598 D KEGG: bja:blr7577 UDP-hexose transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase 5125678..5126598 Rhodopseudomonas palustris DX-1 10067011 YP_004111047.1 CDS Rpdx1_4768 NC_014834.1 5126602 5127636 R PFAM: glycoside hydrolase family 5; KEGG: bja:blr3367 cellulase; glycoside hydrolase family protein complement(5126602..5127636) Rhodopseudomonas palustris DX-1 10067012 YP_004111048.1 CDS Rpdx1_4769 NC_014834.1 5127630 5128919 R PFAM: O-antigen polymerase; KEGG: bja:blr3366 hypothetical protein; O-antigen polymerase complement(5127630..5128919) Rhodopseudomonas palustris DX-1 10067013 YP_004111049.1 CDS Rpdx1_4770 NC_014834.1 5129024 5131141 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: bja:blr3362 hypothetical protein; lipopolysaccharide biosynthesis protein complement(5129024..5131141) Rhodopseudomonas palustris DX-1 10067014 YP_004111050.1 CDS Rpdx1_4771 NC_014834.1 5131424 5132620 D PFAM: glycosyl transferase group 1; KEGG: bja:bll3361 glycosyl transferase; glycosyl transferase group 1 protein 5131424..5132620 Rhodopseudomonas palustris DX-1 10067015 YP_004111051.1 CDS Rpdx1_4772 NC_014834.1 5132647 5134176 D KEGG: bja:bll3360 hypothetical protein; hypothetical protein 5132647..5134176 Rhodopseudomonas palustris DX-1 10067016 YP_004111052.1 CDS Rpdx1_4773 NC_014834.1 5134196 5134555 R KEGG: rhi:NGR_b19050 hypothetical protein; hypothetical protein complement(5134196..5134555) Rhodopseudomonas palustris DX-1 10067017 YP_004111053.1 CDS Rpdx1_4774 NC_014834.1 5134817 5136169 D KEGG: bja:bll3363 hypothetical protein; manually curated; PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 5134817..5136169 Rhodopseudomonas palustris DX-1 10067018 YP_004111054.1 CDS Rpdx1_4775 NC_014834.1 5136240 5137241 R KEGG: bja:bll0244 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase complement(5136240..5137241) Rhodopseudomonas palustris DX-1 10067019 YP_004111055.1 CDS Rpdx1_4777 NC_014834.1 5137850 5138308 D PFAM: protein of unknown function DUF861 cupin_3; KEGG: bra:BRADO0883 putative RmlC-like cupin family protein; hypothetical protein 5137850..5138308 Rhodopseudomonas palustris DX-1 10067021 YP_004111056.1 CDS Rpdx1_4778 NC_014834.1 5138489 5139076 D PFAM: Protein of unknown function DUF2478; KEGG: sit:TM1040_2053 3-dehydroquinate dehydratase; hypothetical protein 5138489..5139076 Rhodopseudomonas palustris DX-1 10067022 YP_004111057.1 CDS Rpdx1_4779 NC_014834.1 5139398 5139694 R KEGG: bra:BRADO5383 putative ferredoxin protein, FixX; putative ferredoxin protein, FixX complement(5139398..5139694) Rhodopseudomonas palustris DX-1 10067023 YP_004111058.1 CDS Rpdx1_4780 NC_014834.1 5139728 5141035 R KEGG: bbt:BBta_5870 FixC protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; electron-transferring-flavoprotein dehydrogenase complement(5139728..5141035) Rhodopseudomonas palustris DX-1 10067024 YP_004111059.1 CDS Rpdx1_4781 NC_014834.1 5141048 5142154 R PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: bra:BRADO5385 protein FixB; electron transfer flavoprotein alpha chain; electron transfer flavoprotein subunit alpha complement(5141048..5142154) Rhodopseudomonas palustris DX-1 10067025 YP_004111060.1 CDS Rpdx1_4782 NC_014834.1 5142179 5143024 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bbt:BBta_5872 protein FixA; electron transfer flavoprotein subunit alpha/beta complement(5142179..5143024) Rhodopseudomonas palustris DX-1 10067026 YP_004111061.1 CDS Rpdx1_4783 NC_014834.1 5143214 5143342 D hypothetical protein 5143214..5143342 Rhodopseudomonas palustris DX-1 10067027 YP_004111062.1 CDS Rpdx1_4784 NC_014834.1 5143363 5143713 R PFAM: nitrogen fixation protein NifW; KEGG: bja:blr1771 nitrogenase stabilizing/protective protein; nitrogen fixation protein NifW complement(5143363..5143713) Rhodopseudomonas palustris DX-1 10067028 YP_004111063.1 CDS Rpdx1_4785 NC_014834.1 5143743 5144936 R KEGG: bra:BRADO5390 homocitrate synthase; TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; homocitrate synthase complement(5143743..5144936) Rhodopseudomonas palustris DX-1 10067029 YP_004111064.1 CDS Rpdx1_4786 NC_014834.1 5144929 5146161 R TIGRFAM: cysteine desulfurase NifS; KEGG: met:M446_3581 cysteine desulfurase NifS; PFAM: aminotransferase class V; cysteine desulfurase NifS complement(5144929..5146161) Rhodopseudomonas palustris DX-1 10067030 YP_004111065.1 CDS Rpdx1_4787 NC_014834.1 5146158 5147147 R KEGG: met:M446_3582 Fe-S cluster assembly protein NifU; TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; Fe-S cluster assembly protein NifU complement(5146158..5147147) Rhodopseudomonas palustris DX-1 10067031 YP_004111066.1 CDS Rpdx1_4788 NC_014834.1 5147175 5147495 R KEGG: mlo:mll5942 hypothetical protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein complement(5147175..5147495) Rhodopseudomonas palustris DX-1 10067032 YP_004111067.1 CDS Rpdx1_4789 NC_014834.1 5147864 5148574 R PFAM: NifQ family protein; KEGG: bra:BRADO5393 putative nitrogen fixation protein NifQ; NifQ family protein complement(5147864..5148574) Rhodopseudomonas palustris DX-1 10067033 YP_004111068.1 CDS Rpdx1_4790 NC_014834.1 5148592 5148903 R TIGRFAM: ferredoxin III, nif-specific; KEGG: met:M446_3542 ferredoxin III, nif-specific; ferredoxin III complement(5148592..5148903) Rhodopseudomonas palustris DX-1 10067034 YP_004111069.1 CDS Rpdx1_4791 NC_014834.1 5148960 5149166 R PFAM: protein of unknown function DUF683; KEGG: met:M446_3541 hypothetical protein; hypothetical protein complement(5148960..5149166) Rhodopseudomonas palustris DX-1 10067035 YP_004111070.1 CDS Rpdx1_4792 NC_014834.1 5149184 5149648 R KEGG: bid:Bind_0479 nitrogen fixation protein; TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269; nitrogen fixation protein complement(5149184..5149648) Rhodopseudomonas palustris DX-1 10067036 YP_004111071.1 CDS Rpdx1_4793 NC_014834.1 5149650 5150048 R KEGG: azc:AZC_1036 nitrogenase molybdenum-iron NifX protein; TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; nitrogen fixation protein NifX complement(5149650..5150048) Rhodopseudomonas palustris DX-1 10067037 YP_004111072.1 CDS Rpdx1_4794 NC_014834.1 5150104 5151477 R TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: mca:MCA0234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN complement(5150104..5151477) Rhodopseudomonas palustris DX-1 10067038 YP_004111073.1 CDS Rpdx1_4795 NC_014834.1 5151488 5152951 R KEGG: mca:MCA0233 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase MoFe cofactor biosynthesis protein NifE complement(5151488..5152951) Rhodopseudomonas palustris DX-1 10067039 YP_004111074.1 CDS Rpdx1_4796 NC_014834.1 5152990 5154549 R TIGRFAM: nitrogenase molybdenum-iron protein beta chain; KEGG: azc:AZC_1039 nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta complement(5152990..5154549) Rhodopseudomonas palustris DX-1 10067040 YP_004111075.1 CDS Rpdx1_4797 NC_014834.1 5154623 5156086 R TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; KEGG: msl:Msil_3631 nitrogenase molybdenum-iron protein alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha complement(5154623..5156086) Rhodopseudomonas palustris DX-1 10067041 YP_004111076.1 CDS Rpdx1_4798 NC_014834.1 5156158 5157054 R TIGRFAM: nitrogenase iron protein; KEGG: met:M446_3534 nitrogenase reductase; PFAM: NifH/frxC-family protein; nitrogenase iron protein complement(5156158..5157054) Rhodopseudomonas palustris DX-1 10067042 YP_004111077.1 CDS Rpdx1_4799 NC_014834.1 5157775 5158677 R KEGG: msl:Msil_3634 hypothetical protein; hypothetical protein complement(5157775..5158677) Rhodopseudomonas palustris DX-1 10067043 YP_004111078.1 CDS Rpdx1_4800 NC_014834.1 5158693 5158971 R KEGG: bid:Bind_0405 hypothetical protein; hypothetical protein complement(5158693..5158971) Rhodopseudomonas palustris DX-1 10067044 YP_004111079.1 CDS Rpdx1_4801 NC_014834.1 5158974 5159174 R KEGG: bxe:Bxe_B1454 nitrogen fixation protein; TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; nitrogen fixation protein FixT complement(5158974..5159174) Rhodopseudomonas palustris DX-1 10067045 YP_004111080.1 CDS Rpdx1_4802 NC_014834.1 5159212 5159445 R PFAM: NifZ family protein; KEGG: msl:Msil_3640 NifZ family protein; NifZ family protein complement(5159212..5159445) Rhodopseudomonas palustris DX-1 10067046 YP_004111081.1 CDS Rpdx1_4803 NC_014834.1 5159445 5159744 R PFAM: NifZ family protein; KEGG: min:Minf_0458 NifZ domain; NifZ family protein complement(5159445..5159744) Rhodopseudomonas palustris DX-1 10067047 YP_004111082.1 CDS Rpdx1_4804 NC_014834.1 5159741 5160526 R PFAM: LRV FeS4 cluster domain protein; KEGG: azc:AZC_3418 hypothetical protein; LRV FeS4 cluster domain-containing protein complement(5159741..5160526) Rhodopseudomonas palustris DX-1 10067048 YP_004111083.1 CDS Rpdx1_4805 NC_014834.1 5160516 5161055 R KEGG: xau:Xaut_0114 hypothetical protein; hypothetical protein complement(5160516..5161055) Rhodopseudomonas palustris DX-1 10067049 YP_004111084.1 CDS Rpdx1_4806 NC_014834.1 5161059 5161412 R KEGG: mca:MCA0206 HesB/YadR/YfhF family protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein complement(5161059..5161412) Rhodopseudomonas palustris DX-1 10067050 YP_004111085.1 CDS Rpdx1_4807 NC_014834.1 5161423 5161644 R KEGG: bbt:BBta_5903 ferredoxin-like (in nif region); ferredoxin-like protein complement(5161423..5161644) Rhodopseudomonas palustris DX-1 10067051 YP_004111086.1 CDS Rpdx1_4808 NC_014834.1 5161670 5163226 R KEGG: azc:AZC_3414 nitrogenase cofactor biosynthesis protein; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; nitrogenase cofactor biosynthesis protein NifB complement(5161670..5163226) Rhodopseudomonas palustris DX-1 10067052 YP_004111087.1 CDS Rpdx1_4809 NC_014834.1 5163385 5163579 R KEGG: gdj:Gdia_1575 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(5163385..5163579) Rhodopseudomonas palustris DX-1 10067053 YP_004111088.1 CDS Rpdx1_4810 NC_014834.1 5163853 5165607 R TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; KEGG: bbt:BBta_5933 NifA subfamily transcriptional regulator; SMART: GAF domain protein; AAA ATPase; NifA subfamily transcriptional regulator complement(5163853..5165607) Rhodopseudomonas palustris DX-1 10067054 YP_004111089.1 CDS Rpdx1_4811 NC_014834.1 5165920 5166729 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_5935 FixR protein; short-chain dehydrogenase/reductase SDR complement(5165920..5166729) Rhodopseudomonas palustris DX-1 10067055 YP_004111090.1 CDS Rpdx1_4812 NC_014834.1 5167074 5167928 D KEGG: bbt:BBta_5936 hypothetical protein; hypothetical protein 5167074..5167928 Rhodopseudomonas palustris DX-1 10067056 YP_004111091.1 CDS Rpdx1_4813 NC_014834.1 5167985 5169865 R KEGG: bja:blr6523 putative iron transport protein; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; ferrous iron transport protein B complement(5167985..5169865) Rhodopseudomonas palustris DX-1 10067057 YP_004111092.1 CDS Rpdx1_4814 NC_014834.1 5169900 5170190 R PFAM: FeoA family protein; KEGG: bra:BRADO5587 putative FeoA family protein; FeoA family protein complement(5169900..5170190) Rhodopseudomonas palustris DX-1 10067058 YP_004111093.1 CDS Rpdx1_4815 NC_014834.1 5170574 5170735 D hypothetical protein 5170574..5170735 Rhodopseudomonas palustris DX-1 10067059 YP_004111094.1 CDS Rpdx1_4816 NC_014834.1 5170839 5172530 R KEGG: bbt:BBta_2902 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(5170839..5172530) Rhodopseudomonas palustris DX-1 10067060 YP_004111095.1 CDS Rpdx1_4818 NC_014834.1 5174762 5175163 R KEGG: ami:Amir_3294 acyl transferase; acyl transferase complement(5174762..5175163) Rhodopseudomonas palustris DX-1 10067062 YP_004111096.1 CDS Rpdx1_4819 NC_014834.1 5175457 5176842 R KEGG: rsq:Rsph17025_4020 ribulose bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; ribulose-bisphosphate carboxylase complement(5175457..5176842) Rhodopseudomonas palustris DX-1 10067063 YP_004111097.1 CDS Rpdx1_4820 NC_014834.1 5176901 5177986 R TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: nha:Nham_4048 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase complement(5176901..5177986) Rhodopseudomonas palustris DX-1 10067064 YP_004111098.1 CDS Rpdx1_4821 NC_014834.1 5178046 5180061 R KEGG: bbt:BBta_6399 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; transketolase complement(5178046..5180061) Rhodopseudomonas palustris DX-1 10067065 YP_004111099.1 CDS Rpdx1_4822 NC_014834.1 5180096 5180971 R KEGG: bbt:BBta_6400 phosphoribulokinase; phosphoribulokinase complement(5180096..5180971) Rhodopseudomonas palustris DX-1 10067066 YP_004111100.1 CDS Rpdx1_4823 NC_014834.1 5181009 5182040 R PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: nha:Nham_3754 fructose-1,6-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase complement(5181009..5182040) Rhodopseudomonas palustris DX-1 10067067 YP_004111101.1 CDS Rpdx1_4824 NC_014834.1 5182512 5183261 D KEGG: sth:STH2045 esterase; PFAM: alpha/beta hydrolase fold; acylglycerol lipase 5182512..5183261 Rhodopseudomonas palustris DX-1 10067068 YP_004111102.1 CDS Rpdx1_4826 NC_014834.1 5184337 5186100 R KEGG: bja:blr3703 flagellar hook-associated protein; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK complement(5184337..5186100) Rhodopseudomonas palustris DX-1 10067070 YP_004111103.1 CDS Rpdx1_4827 NC_014834.1 5186122 5186577 R KEGG: bbt:BBta_3167 hypothetical protein; hypothetical protein complement(5186122..5186577) Rhodopseudomonas palustris DX-1 10067071 YP_004111104.1 CDS Rpdx1_4828 NC_014834.1 5186574 5186858 R KEGG: swi:Swit_3816 translation initiation factor IF-2; translation initiation factor IF-2 complement(5186574..5186858) Rhodopseudomonas palustris DX-1 10067072 YP_004111105.1 CDS Rpdx1_4829 NC_014834.1 5186862 5188130 R KEGG: bja:blr3700 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar hook-basal body protein complement(5186862..5188130) Rhodopseudomonas palustris DX-1 10067073 YP_004111106.1 CDS Rpdx1_4830 NC_014834.1 5188149 5188817 R PFAM: flagellar hook capping protein; KEGG: bbt:BBta_3164 putative basal-body rod modification protein FlgD; flagellar hook capping protein complement(5188149..5188817) Rhodopseudomonas palustris DX-1 10067074 YP_004111107.1 CDS Rpdx1_4831 NC_014834.1 5189064 5189354 R KEGG: bja:blr3698 hypothetical protein; hypothetical protein complement(5189064..5189354) Rhodopseudomonas palustris DX-1 10067075 YP_004111108.1 CDS Rpdx1_4832 NC_014834.1 5189480 5189884 R KEGG: bbt:BBta_3161 putative flagellar protein FliS; putative flagellar protein FliS complement(5189480..5189884) Rhodopseudomonas palustris DX-1 10067076 YP_004111109.1 CDS Rpdx1_4833 NC_014834.1 5189887 5191581 R PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; flagellin hook IN repeat protein; KEGG: bbt:BBta_3160 putative flagellar hook-associated protein 2 (HAP2, FliD protein); flagellar hook-associated 2 domain-containing protein complement(5189887..5191581) Rhodopseudomonas palustris DX-1 10067077 YP_004111110.1 CDS Rpdx1_4834 NC_014834.1 5191649 5192464 R PFAM: flagellin domain protein; KEGG: bbt:BBta_3159 putative flagellin; flagellin domain-containing protein complement(5191649..5192464) Rhodopseudomonas palustris DX-1 10067078 YP_004111111.1 CDS Rpdx1_4835 NC_014834.1 5192606 5193262 R KEGG: bra:BRADO4891 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit complement(5192606..5193262) Rhodopseudomonas palustris DX-1 10067079 YP_004111112.1 CDS Rpdx1_4836 NC_014834.1 5193854 5195236 D KEGG: bbt:BBta_3157 hypothetical protein; hypothetical protein 5193854..5195236 Rhodopseudomonas palustris DX-1 10067080 YP_004111113.1 CDS Rpdx1_4837 NC_014834.1 5195678 5197171 R TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: nha:Nham_3615 alpha,alpha-trehalose-phosphate synthase; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase complement(5195678..5197171) Rhodopseudomonas palustris DX-1 10067082 YP_004111114.1 CDS Rpdx1_4838 NC_014834.1 5197314 5198114 R KEGG: bja:bll0323 trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; trehalose-phosphatase complement(5197314..5198114) Rhodopseudomonas palustris DX-1 10067083 YP_004111115.1 CDS Rpdx1_4839 NC_014834.1 5198111 5199610 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll0324 putative sugar transport protein; major facilitator superfamily protein complement(5198111..5199610) Rhodopseudomonas palustris DX-1 10067084 YP_004111116.1 CDS Rpdx1_4840 NC_014834.1 5199798 5201843 R KEGG: bja:bll0327 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(5199798..5201843) Rhodopseudomonas palustris DX-1 10067085 YP_004111117.1 CDS Rpdx1_4842 NC_014834.1 5202508 5202993 D PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bra:BRADO6957 putative carbon-monoxide dehydrogenase small subunit, CoxS-like protein; (2Fe-2S)-binding domain-containing protein 5202508..5202993 Rhodopseudomonas palustris DX-1 10067087 YP_004111118.1 CDS Rpdx1_4843 NC_014834.1 5203119 5205473 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bra:BRADO6958 putative carbon-monoxide dehydrogenase large subunit, CoxL-like protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 5203119..5205473 Rhodopseudomonas palustris DX-1 10067088 YP_004111119.1 CDS Rpdx1_4844 NC_014834.1 5205641 5206441 D KEGG: bbt:BBta_0572 putative carbon monoxide dehydrogenase medium subunit, CoxM-like protein; PFAM: molybdopterin dehydrogenase FAD-binding; carbon-monoxide dehydrogenase 5205641..5206441 Rhodopseudomonas palustris DX-1 10067089 YP_004111120.1 CDS Rpdx1_4845 NC_014834.1 5206627 5207742 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr0338 alpha-methylacyl-CoA racemase; L-carnitine dehydratase/bile acid-inducible protein F 5206627..5207742 Rhodopseudomonas palustris DX-1 10067090 YP_004111121.1 CDS Rpdx1_4846 NC_014834.1 5207866 5209134 R TIGRFAM: fumarylacetoacetase; KEGG: bbt:BBta_0567 fumarylacetoacetate hydrolase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetase complement(5207866..5209134) Rhodopseudomonas palustris DX-1 10067091 YP_004111122.1 CDS Rpdx1_4848 NC_014834.1 5209338 5209994 R KEGG: nha:Nham_0920 maleylacetoacetate isomerase; TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; maleylacetoacetate isomerase complement(5209338..5209994) Rhodopseudomonas palustris DX-1 10067093 YP_004111123.1 CDS Rpdx1_4849 NC_014834.1 5209991 5211337 R TIGRFAM: homogentisate 1,2-dioxygenase; KEGG: bja:bll0343 homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase; homogentisate 1,2-dioxygenase complement(5209991..5211337) Rhodopseudomonas palustris DX-1 10067094 YP_004111124.1 CDS Rpdx1_4850 NC_014834.1 5211395 5212348 R KEGG: bbt:BBta_0565 putative metallo-beta-lactamase family protein; putative metallo-beta-lactamase family protein complement(5211395..5212348) Rhodopseudomonas palustris DX-1 10067095 YP_004111125.1 CDS Rpdx1_4851 NC_014834.1 5212543 5212758 R KEGG: nha:Nham_0923 hypothetical protein; hypothetical protein complement(5212543..5212758) Rhodopseudomonas palustris DX-1 10067096 YP_004111126.1 CDS Rpdx1_4852 NC_014834.1 5212755 5214371 R PFAM: monooxygenase FAD-binding; KEGG: nha:Nham_0924 FAD-dependent oxidoreductase; FAD-binding monooxygenase protein complement(5212755..5214371) Rhodopseudomonas palustris DX-1 10067097 YP_004111127.1 CDS Rpdx1_4853 NC_014834.1 5214498 5214995 D KEGG: bra:BRADO6970 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 5214498..5214995 Rhodopseudomonas palustris DX-1 10067098 YP_004111128.1 CDS Rpdx1_4854 NC_014834.1 5215165 5216589 D KEGG: nwi:Nwi_3029 peptidase C14; PFAM: peptidase C14 caspase catalytic subunit p20; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; peptidase C14 caspase catalytic subunit p20 5215165..5216589 Rhodopseudomonas palustris DX-1 10067099 YP_004111129.1 CDS Rpdx1_4855 NC_014834.1 5216710 5217360 D PFAM: OmpA/MotB domain protein; KEGG: bbt:BBta_0555 hypothetical protein; OmpA/MotB domain-containing protein 5216710..5217360 Rhodopseudomonas palustris DX-1 10067100 YP_004111130.1 CDS Rpdx1_4856 NC_014834.1 5217520 5218407 D KEGG: nha:Nham_3611 secretion protein HlyD; secretion protein HlyD 5217520..5218407 Rhodopseudomonas palustris DX-1 10067101 YP_004111131.1 CDS Rpdx1_4857 NC_014834.1 5218407 5221550 D PFAM: acriflavin resistance protein; KEGG: nha:Nham_3610 acriflavin resistance protein; acriflavin resistance protein 5218407..5221550 Rhodopseudomonas palustris DX-1 10067102 YP_004111132.1 CDS Rpdx1_4858 NC_014834.1 5221601 5223421 D PFAM: AsmA family protein; KEGG: nha:Nham_3609 AsmA; AsmA family protein 5221601..5223421 Rhodopseudomonas palustris DX-1 10067103 YP_004111133.1 CDS Rpdx1_4859 NC_014834.1 5223528 5224427 D TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bbt:BBta_0549 hypothetical protein; RND family efflux transporter MFP subunit 5223528..5224427 Rhodopseudomonas palustris DX-1 10067104 YP_004111134.1 CDS Rpdx1_4860 NC_014834.1 5224465 5224746 R KEGG: ppu:PP_1576 immunity protein, putative; hypothetical protein complement(5224465..5224746) Rhodopseudomonas palustris DX-1 10067105 YP_004111135.1 CDS Rpdx1_4861 NC_014834.1 5225057 5226694 R TIGRFAM: lysyl-tRNA synthetase; KEGG: nwi:Nwi_0151 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic; lysyl-tRNA synthetase complement(5225057..5226694) Rhodopseudomonas palustris DX-1 10067106 YP_004111136.1 CDS Rpdx1_4862 NC_014834.1 5226728 5227687 R KEGG: nha:Nham_0202 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein complement(5226728..5227687) Rhodopseudomonas palustris DX-1 10067107 YP_004111137.1 CDS Rpdx1_4863 NC_014834.1 5227728 5229848 D PFAM: glycosyl transferase family 2; KEGG: oca:OCAR_4666 glycosyl transferase, family 2; glycosyl transferase family 2 protein 5227728..5229848 Rhodopseudomonas palustris DX-1 10067108 YP_004111138.1 CDS Rpdx1_4864 NC_014834.1 5229799 5230398 R PFAM: electron transport protein SCO1/SenC; KEGG: bbt:BBta_0787 putative electron transport protein; electron transport protein SCO1/SenC complement(5229799..5230398) Rhodopseudomonas palustris DX-1 10067109 YP_004111139.1 CDS Rpdx1_4865 NC_014834.1 5230605 5231063 R KEGG: bja:blr1130 hypothetical protein; hypothetical protein complement(5230605..5231063) Rhodopseudomonas palustris DX-1 10067110 YP_004111140.1 CDS Rpdx1_4866 NC_014834.1 5231803 5233773 D KEGG: bbt:BBta_1388 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 5231803..5233773 Rhodopseudomonas palustris DX-1 10067111 YP_004111141.1 CDS Rpdx1_4867 NC_014834.1 5233924 5234301 D KEGG: bja:bll4535 hypothetical protein; hypothetical protein 5233924..5234301 Rhodopseudomonas palustris DX-1 10067112 YP_004111142.1 CDS Rpdx1_4868 NC_014834.1 5234419 5235582 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bpa:BPP0371 NADH:flavin oxidoreductase / NADH oxidase family protein; NADH:flavin oxidoreductase complement(5234419..5235582) Rhodopseudomonas palustris DX-1 10067113 YP_004111143.1 CDS Rpdx1_4869 NC_014834.1 5235746 5236744 D PFAM: conserved hypothetical protein; KEGG: azc:AZC_3350 hypothetical protein; hypothetical protein 5235746..5236744 Rhodopseudomonas palustris DX-1 10067114 YP_004111144.1 CDS Rpdx1_4870 NC_014834.1 5236767 5237669 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bra:BRADO2335 protochatechuate degradation transcriptional regulator; LysR family transcriptional regulator 5236767..5237669 Rhodopseudomonas palustris DX-1 10067115 YP_004111145.1 CDS Rpdx1_4871 NC_014834.1 5237796 5238914 D PFAM: protein of unknown function DUF453; KEGG: azo:azo2544 hypothetical protein; hypothetical protein 5237796..5238914 Rhodopseudomonas palustris DX-1 10067116 YP_004111146.1 CDS Rpdx1_4872 NC_014834.1 5239080 5240108 D PFAM: amidohydrolase 2; KEGG: bra:BRADO2337 4-oxalomesaconate hydratase; amidohydrolase 2 5239080..5240108 Rhodopseudomonas palustris DX-1 10067117 YP_004111147.1 CDS Rpdx1_4873 NC_014834.1 5240111 5240806 D KEGG: mag:amb0252 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 5240111..5240806 Rhodopseudomonas palustris DX-1 10067118 YP_004111148.1 CDS Rpdx1_4874 NC_014834.1 5240806 5241735 D PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bra:BRADO2339 dehydrogenase; phosphogluconate dehydrogenase, NAD-binding, putative-like protein 5240806..5241735 Rhodopseudomonas palustris DX-1 10067119 YP_004111149.1 CDS Rpdx1_4875 NC_014834.1 5242000 5242914 D PFAM: amidohydrolase 2; KEGG: bra:BRADO2340 2-pyrone-4,6-dicarboxylic acid hydrolase; amidohydrolase 2 5242000..5242914 Rhodopseudomonas palustris DX-1 10067120 YP_004111150.1 CDS Rpdx1_4876 NC_014834.1 5243040 5243429 D TIGRFAM: protocatechuate 4,5-dioxygenase, alpha subunit; KEGG: bbt:BBta_2701 protocatechuate 4,5-dioxygenase subunit alpha; PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit; protocatechuate 4,5-dioxygenase subunit alpha 5243040..5243429 Rhodopseudomonas palustris DX-1 10067121 YP_004111151.1 CDS Rpdx1_4877 NC_014834.1 5243429 5244283 D PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bra:BRADO2342 protocatechuate 4,5-dioxygenase subunit beta; extradiol ring-cleavage dioxygenase class III protein subunit B 5243429..5244283 Rhodopseudomonas palustris DX-1 10067122 YP_004111152.1 CDS Rpdx1_4878 NC_014834.1 5244285 5245244 D PFAM: oxidoreductase domain protein; KEGG: bra:BRADO2343 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; oxidoreductase domain-containing protein 5244285..5245244 Rhodopseudomonas palustris DX-1 10067123 YP_004111153.1 CDS Rpdx1_4879 NC_014834.1 5245435 5245851 D KEGG: nha:Nham_3738 hypothetical protein; hypothetical protein 5245435..5245851 Rhodopseudomonas palustris DX-1 10067124 YP_004111154.1 CDS Rpdx1_4880 NC_014834.1 5245956 5246348 D KEGG: bja:blr1323 phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-ATP diphosphatase 5245956..5246348 Rhodopseudomonas palustris DX-1 10067125 YP_004111155.1 CDS Rpdx1_4881 NC_014834.1 5246418 5246999 D KEGG: oca:OCAR_7372 DedA family; DedA family 5246418..5246999 Rhodopseudomonas palustris DX-1 10067126 YP_004111156.1 CDS Rpdx1_4882 NC_014834.1 5247055 5247702 D KEGG: bra:BRADO6577 putative signal peptide; hypothetical protein 5247055..5247702 Rhodopseudomonas palustris DX-1 10067127 YP_004111157.1 CDS Rpdx1_4883 NC_014834.1 5247847 5248815 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: bbt:BBta_0960 putative dioxygenase; 2-nitropropane dioxygenase 5247847..5248815 Rhodopseudomonas palustris DX-1 10067128 YP_004111158.1 CDS Rpdx1_4884 NC_014834.1 5248971 5249744 D KEGG: bja:blr1328 hypothetical protein; hypothetical protein 5248971..5249744 Rhodopseudomonas palustris DX-1 10067129 YP_004111159.1 CDS Rpdx1_4885 NC_014834.1 5249934 5250188 D KEGG: bbt:BBta_0975 hypothetical protein; hypothetical protein 5249934..5250188 Rhodopseudomonas palustris DX-1 10067130 YP_004111160.1 CDS Rpdx1_4886 NC_014834.1 5250325 5251062 D KEGG: bra:BRADO6560 putative signal peptide; hypothetical protein 5250325..5251062 Rhodopseudomonas palustris DX-1 10067131 YP_004111161.1 CDS Rpdx1_4887 NC_014834.1 5251120 5252865 R PFAM: TPR repeat-containing protein; KEGG: nar:Saro_3797 SARP family transcriptional regulator; hypothetical protein complement(5251120..5252865) Rhodopseudomonas palustris DX-1 10067132 YP_004111162.1 CDS Rpdx1_4888 NC_014834.1 5253079 5254080 D KEGG: mar:MAE_00590 putative peptidase PatA-like protein; putative peptidase PatA-like protein 5253079..5254080 Rhodopseudomonas palustris DX-1 10067133 YP_004111163.1 CDS Rpdx1_4889 NC_014834.1 5254053 5254619 R PFAM: Protein of unknown function DUF2478; KEGG: mch:Mchl_5508 hypothetical protein; hypothetical protein complement(5254053..5254619) Rhodopseudomonas palustris DX-1 10067134 YP_004111164.1 CDS Rpdx1_4890 NC_014834.1 5254766 5255887 R TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; KEGG: bja:blr6953 molybdenum ABC transporter ATP-binding protein; SMART: AAA ATPase; molybdate ABC transporter ATPase complement(5254766..5255887) Rhodopseudomonas palustris DX-1 10067135 YP_004111165.1 CDS Rpdx1_4891 NC_014834.1 5255884 5256570 R KEGG: bbt:BBta_2079 molybdenum ABC transporter permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit complement(5255884..5256570) Rhodopseudomonas palustris DX-1 10067136 YP_004111166.1 CDS Rpdx1_4892 NC_014834.1 5256684 5257457 R KEGG: bja:blr6951 molybdenum ABC transporter molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein complement(5256684..5257457) Rhodopseudomonas palustris DX-1 10067137 YP_004111167.1 CDS Rpdx1_4893 NC_014834.1 5257576 5258367 R KEGG: nha:Nham_2953 ModE family transcriptional regulator; TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; putative ModE family transcriptional regulator complement(5257576..5258367) Rhodopseudomonas palustris DX-1 10067138 YP_004111168.1 CDS Rpdx1_4894 NC_014834.1 5258467 5258676 D PFAM: TOBE domain protein; KEGG: mlo:msr1466 molybdo-pterin binding protein; TOBE domain-containing protein 5258467..5258676 Rhodopseudomonas palustris DX-1 10067139 YP_004111169.1 CDS Rpdx1_4895 NC_014834.1 5258721 5259290 R PFAM: Protein of unknown function DUF2478; KEGG: nha:Nham_3410 hypothetical protein; hypothetical protein complement(5258721..5259290) Rhodopseudomonas palustris DX-1 10067140 YP_004111170.1 CDS Rpdx1_4896 NC_014834.1 5259772 5264760 D PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: rfr:Rfer_3209 pyruvate flavodoxin/ferredoxin oxidoreductase-like; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 5259772..5264760 Rhodopseudomonas palustris DX-1 10067141 YP_004111171.1 CDS Rpdx1_4897 NC_014834.1 5264757 5267591 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: rfr:Rfer_3208 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5264757..5267591 Rhodopseudomonas palustris DX-1 10067142 YP_004111172.1 CDS Rpdx1_4898 NC_014834.1 5267780 5268115 R KEGG: azc:AZC_3513 hypothetical protein; hypothetical protein complement(5267780..5268115) Rhodopseudomonas palustris DX-1 10067143 YP_004111173.1 CDS Rpdx1_4899 NC_014834.1 5268584 5271667 D TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: bja:blr8131 DNA polymerase I; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA polymerase I 5268584..5271667 Rhodopseudomonas palustris DX-1 10067144 YP_004111174.1 CDS Rpdx1_4900 NC_014834.1 5271757 5272320 D TIGRFAM: orotate phosphoribosyltransferase; KEGG: nha:Nham_0451 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 5271757..5272320 Rhodopseudomonas palustris DX-1 10067145 YP_004111175.1 CDS Rpdx1_4901 NC_014834.1 5272478 5273221 D KEGG: bja:blr8135 hypothetical protein; hypothetical protein 5272478..5273221 Rhodopseudomonas palustris DX-1 10067146 YP_004111176.1 CDS Rpdx1_4902 NC_014834.1 5273456 5273887 R KEGG: bja:bll8136 hypothetical protein; hypothetical protein complement(5273456..5273887) Rhodopseudomonas palustris DX-1 10067147 YP_004111177.1 CDS Rpdx1_4903 NC_014834.1 5274206 5276719 D KEGG: bbt:BBta_7363 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 5274206..5276719 Rhodopseudomonas palustris DX-1 10067148 YP_004111178.1 CDS Rpdx1_4904 NC_014834.1 5276997 5277830 D KEGG: bja:blr8140 hypothetical protein; hypothetical protein 5276997..5277830 Rhodopseudomonas palustris DX-1 10067149 YP_004111179.1 CDS Rpdx1_4905 NC_014834.1 5277880 5278869 D KEGG: nwi:Nwi_0352 arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; arginase 5277880..5278869 Rhodopseudomonas palustris DX-1 10067150 YP_004111180.1 CDS Rpdx1_4906 NC_014834.1 5279120 5280739 D KEGG: bra:BRADO3397 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5279120..5280739 Rhodopseudomonas palustris DX-1 10067151 YP_004111181.1 CDS Rpdx1_4907 NC_014834.1 5280895 5282088 R KEGG: nha:Nham_0672 hypothetical protein; hypothetical protein complement(5280895..5282088) Rhodopseudomonas palustris DX-1 10067152 YP_004111182.1 CDS Rpdx1_4908 NC_014834.1 5282249 5282827 D PFAM: ChaC family protein; KEGG: bbt:BBta_1180 putative cation transport protein ChaC-related; ChaC family protein 5282249..5282827 Rhodopseudomonas palustris DX-1 10067153 YP_004111183.1 CDS Rpdx1_4909 NC_014834.1 5282846 5283655 R KEGG: bja:blr1393 1-acylglycerol-3-phosphate O-acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(5282846..5283655) Rhodopseudomonas palustris DX-1 10067154 YP_004111184.1 CDS Rpdx1_4910 NC_014834.1 5283669 5284394 R PFAM: protein of unknown function DUF218; KEGG: nha:Nham_0669 hypothetical protein; hypothetical protein complement(5283669..5284394) Rhodopseudomonas palustris DX-1 10067155 YP_004111185.1 CDS Rpdx1_4911 NC_014834.1 5284549 5285535 R PFAM: protein of unknown function DUF214; KEGG: bja:blr1391 cell division protein; hypothetical protein complement(5284549..5285535) Rhodopseudomonas palustris DX-1 10067156 YP_004111186.1 CDS Rpdx1_4912 NC_014834.1 5285528 5286187 R TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: bra:BRADO6470 cell division ABC transpoter ATP-binding protein; SMART: AAA ATPase; cell division ATP-binding protein FtsE complement(5285528..5286187) Rhodopseudomonas palustris DX-1 10067157 YP_004111187.1 CDS Rpdx1_4913 NC_014834.1 5286331 5287221 D TIGRFAM: MJ0042 family finger-like protein; KEGG: nha:Nham_0666 zinc finger/thioredoxin putative; hypothetical protein 5286331..5287221 Rhodopseudomonas palustris DX-1 10067158 YP_004111188.1 CDS Rpdx1_4914 NC_014834.1 5287282 5287662 D KEGG: bja:bll1388 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 5287282..5287662 Rhodopseudomonas palustris DX-1 10067159 YP_004111189.1 CDS Rpdx1_4915 NC_014834.1 5287866 5290409 R KEGG: nha:Nham_0664 hypothetical protein; hypothetical protein complement(5287866..5290409) Rhodopseudomonas palustris DX-1 10067160 YP_004111190.1 CDS Rpdx1_4916 NC_014834.1 5290569 5290949 D PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll1385 putative gamma carboxymuconolactone decarboxylase protein; carboxymuconolactone decarboxylase 5290569..5290949 Rhodopseudomonas palustris DX-1 10067161 YP_004111191.1 CDS Rpdx1_4917 NC_014834.1 5291195 5292460 R KEGG: bja:blr1383 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase complement(5291195..5292460) Rhodopseudomonas palustris DX-1 10067162 YP_004111192.1 CDS Rpdx1_4918 NC_014834.1 5292469 5292750 R KEGG: nwi:Nwi_0714 hypothetical protein; hypothetical protein complement(5292469..5292750) Rhodopseudomonas palustris DX-1 10067163 YP_004111193.1 CDS Rpdx1_4919 NC_014834.1 5292807 5294204 R KEGG: bja:blr1381 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase complement(5292807..5294204) Rhodopseudomonas palustris DX-1 10067164 YP_004111194.1 CDS Rpdx1_4920 NC_014834.1 5294300 5294968 D PFAM: Redoxin domain protein; KEGG: bra:BRADO6488 thiol:disulfide interchange protein TlpA (cytochrome c biogenesis protein TlpA); redoxin domain-containing protein 5294300..5294968 Rhodopseudomonas palustris DX-1 10067165 YP_004111195.1 CDS Rpdx1_4921 NC_014834.1 5295074 5295424 D PFAM: protein of unknown function DUF1428; KEGG: oca:OCAR_4758 RNA signal recognition particle 4.5S RNA; hypothetical protein 5295074..5295424 Rhodopseudomonas palustris DX-1 10067166 YP_004111196.1 CDS Rpdx1_4922 NC_014834.1 5295439 5295627 R KEGG: bbt:BBta_1143 hypothetical protein; hypothetical protein complement(5295439..5295627) Rhodopseudomonas palustris DX-1 10067167 YP_004111197.1 CDS Rpdx1_4923 NC_014834.1 5295756 5296556 R KEGG: ara:Arad_0487 NAD(P)H dehydrogenase (quinone) protein; PFAM: NAD(P)H dehydrogenase (quinone); ribosyldihydronicotinamide dehydrogenase complement(5295756..5296556) Rhodopseudomonas palustris DX-1 10067168 YP_004111198.1 CDS Rpdx1_4924 NC_014834.1 5296649 5297563 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mlo:mlr7815 transcriptional regulator; LysR family transcriptional regulator 5296649..5297563 Rhodopseudomonas palustris DX-1 10067169 YP_004111199.1 CDS Rpdx1_4925 NC_014834.1 5297583 5298464 R KEGG: nha:Nham_3479 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxybutyryl-CoA dehydrogenase complement(5297583..5298464) Rhodopseudomonas palustris DX-1 10067170 YP_004111200.1 CDS Rpdx1_4926 NC_014834.1 5298628 5299575 R PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: bja:blr1378 electron transfer flavoprotein large subunit; electron transfer flavoprotein subunit alpha complement(5298628..5299575) Rhodopseudomonas palustris DX-1 10067171 YP_004111201.1 CDS Rpdx1_4927 NC_014834.1 5299575 5300324 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bja:blr1377 electron transfer flavoprotein beta subunit; electron transfer flavoprotein subunit alpha/beta complement(5299575..5300324) Rhodopseudomonas palustris DX-1 10067172 YP_004111202.1 CDS Rpdx1_4928 NC_014834.1 5300531 5301103 R TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: bra:BRADO6493 putative ATP:cob(I)alamin adenosyltransferase, monofunctional PduO type; PFAM: cobalamin adenosyltransferase; ATP/cobalamin adenosyltransferase complement(5300531..5301103) Rhodopseudomonas palustris DX-1 10067173 YP_004111203.1 CDS Rpdx1_4929 NC_014834.1 5301156 5301350 R KEGG: bja:blr1375 hypothetical protein; hypothetical protein complement(5301156..5301350) Rhodopseudomonas palustris DX-1 10067174 YP_004111204.1 CDS Rpdx1_4930 NC_014834.1 5301489 5302382 D KEGG: nwi:Nwi_0750 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; ribonuclease BN 5301489..5302382 Rhodopseudomonas palustris DX-1 10067175 YP_004111205.1 CDS Rpdx1_4931 NC_014834.1 5302309 5303553 R KEGG: bja:blr1373 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; histidine kinase complement(5302309..5303553) Rhodopseudomonas palustris DX-1 10067176 YP_004111206.1 CDS Rpdx1_4932 NC_014834.1 5303628 5304509 R PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: bja:blr1372 glutamyl-Q tRNA(Asp) synthetase; glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain complement(5303628..5304509) Rhodopseudomonas palustris DX-1 10067177 YP_004111207.1 CDS Rpdx1_4933 NC_014834.1 5304580 5305350 D KEGG: bja:bll1371 DNA-3-methyladenine glycosidase II; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; HhH-GPD family protein 5304580..5305350 Rhodopseudomonas palustris DX-1 10067178 YP_004111208.1 CDS Rpdx1_4934 NC_014834.1 5305434 5305874 R KEGG: bja:bll0699 nickel responsive regulator; TIGRFAM: nickel-responsive transcriptional regulator NikR; PFAM: NikR nickel binding; CopG family transcriptional regulator complement(5305434..5305874) Rhodopseudomonas palustris DX-1 10067179 YP_004111209.1 CDS Rpdx1_4935 NC_014834.1 5306032 5308227 D PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bra:BRADO5677 putative iron transport outer membrane receptor; TonB-dependent receptor plug 5306032..5308227 Rhodopseudomonas palustris DX-1 10067180 YP_004111210.1 CDS Rpdx1_4936 NC_014834.1 5308718 5309071 D PFAM: PRC-barrel domain protein; KEGG: oca:OCAR_6906 PRC-barrel domain protein; PRC-barrel domain-containing protein 5308718..5309071 Rhodopseudomonas palustris DX-1 10067181 YP_004111211.1 CDS Rpdx1_4937 NC_014834.1 5309097 5310713 R KEGG: bra:BRADO0511 alpha-glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase complement(5309097..5310713) Rhodopseudomonas palustris DX-1 10067182 YP_004111212.1 CDS Rpdx1_4938 NC_014834.1 5311194 5311721 D KEGG: lth:KLTH0F01518g KLTH0F01518p; hypothetical protein 5311194..5311721 Rhodopseudomonas palustris DX-1 10067183 YP_004111213.1 CDS Rpdx1_4939 NC_014834.1 5311828 5313198 D KEGG: rle:RL2002 putative transposase-related protein; manually curated; PFAM: transposase IS4 family protein; transposase IS4 family protein 5311828..5313198 Rhodopseudomonas palustris DX-1 10067184 YP_004111214.1 CDS Rpdx1_4940 NC_014834.1 5313380 5313553 D KEGG: bcv:Bcav_3921 alpha/beta hydrolase fold-3 domain protein; hypothetical protein 5313380..5313553 Rhodopseudomonas palustris DX-1 10067185 YP_004111215.1 CDS Rpdx1_4941 NC_014834.1 5313553 5314023 D KEGG: dre:100006405 hypothetical LOC100006405; hypothetical protein 5313553..5314023 Rhodopseudomonas palustris DX-1 10067186 YP_004111216.1 CDS Rpdx1_4942 NC_014834.1 5314163 5314315 R hypothetical protein complement(5314163..5314315) Rhodopseudomonas palustris DX-1 10067187 YP_004111217.1 CDS Rpdx1_4943 NC_014834.1 5314752 5315330 D KEGG: bja:bll1113 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 5314752..5315330 Rhodopseudomonas palustris DX-1 10067189 YP_004111218.1 CDS Rpdx1_4944 NC_014834.1 5315327 5316763 R PFAM: multi antimicrobial extrusion protein MatE; KEGG: bra:BRADO6768 putative cation-driven multidrug efflux pump; putative membrane protein; multi antimicrobial extrusion protein MatE complement(5315327..5316763) Rhodopseudomonas palustris DX-1 10067190 YP_004111219.1 CDS Rpdx1_4945 NC_014834.1 5316886 5317935 R KEGG: bja:blr1107 hypothetical protein; hypothetical protein complement(5316886..5317935) Rhodopseudomonas palustris DX-1 10067191 YP_004111220.1 CDS Rpdx1_4946 NC_014834.1 5318084 5319427 D PFAM: NHL repeat containing protein; KEGG: avn:Avin_47060 L-sorbosone dehydrogenase; NHL repeat containing protein 5318084..5319427 Rhodopseudomonas palustris DX-1 10067192 YP_004111221.1 CDS Rpdx1_4947 NC_014834.1 5319464 5320066 R PFAM: protein of unknown function DUF820; KEGG: bbt:BBta_6783 hypothetical protein; hypothetical protein complement(5319464..5320066) Rhodopseudomonas palustris DX-1 10067193 YP_004111222.1 CDS Rpdx1_4948 NC_014834.1 5320128 5321234 R KEGG: nha:Nham_0218 2'-deoxycytidine 5'-triphosphate deaminase; 2'-deoxycytidine 5'-triphosphate deaminase complement(5320128..5321234) Rhodopseudomonas palustris DX-1 10067194 YP_004111223.1 CDS Rpdx1_4949 NC_014834.1 5321498 5322709 D KEGG: nha:Nham_0219 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-succinylhomoserine sulfhydrylase 5321498..5322709 Rhodopseudomonas palustris DX-1 10067195 YP_004111224.1 CDS Rpdx1_4950 NC_014834.1 5322755 5324092 R KEGG: mpo:Mpop_0125 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(5322755..5324092) Rhodopseudomonas palustris DX-1 10067196 YP_004111225.1 CDS Rpdx1_4951 NC_014834.1 5324089 5324748 R KEGG: met:M446_0136 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator complement(5324089..5324748) Rhodopseudomonas palustris DX-1 10067197 YP_004111226.1 CDS Rpdx1_4952 NC_014834.1 5324847 5326679 D KEGG: mpo:Mpop_0123 cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; protein-disulfide reductase 5324847..5326679 Rhodopseudomonas palustris DX-1 10067198 YP_004111227.1 CDS Rpdx1_4953 NC_014834.1 5326704 5327336 D PFAM: DSBA oxidoreductase; KEGG: mea:Mex_1p2579 putative thioredoxin domain protein precursor; DSBA oxidoreductase 5326704..5327336 Rhodopseudomonas palustris DX-1 10067199 YP_004111228.1 CDS Rpdx1_4954 NC_014834.1 5327357 5328004 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mea:Mex_1p2578 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 5327357..5328004 Rhodopseudomonas palustris DX-1 10067200 YP_004111229.1 CDS Rpdx1_4955 NC_014834.1 5328005 5329036 R PFAM: lipolytic protein G-D-S-L family; KEGG: bja:blr1104 hypothetical protein; G-D-S-L family lipolytic protein complement(5328005..5329036) Rhodopseudomonas palustris DX-1 10067201 YP_004111230.1 CDS Rpdx1_4956 NC_014834.1 5329036 5329800 R KEGG: nha:Nham_0221 hypothetical protein; hypothetical protein complement(5329036..5329800) Rhodopseudomonas palustris DX-1 10067202 YP_004111231.1 CDS Rpdx1_4957 NC_014834.1 5329812 5331074 R PFAM: conserved hypothetical protein; KEGG: bja:blr1102 hypothetical protein; hypothetical protein complement(5329812..5331074) Rhodopseudomonas palustris DX-1 10067203 YP_004111232.1 CDS Rpdx1_4958 NC_014834.1 5331325 5331717 D PFAM: ApaG domain protein; KEGG: bja:bll1101 ApaG; ApaG domain-containing protein 5331325..5331717 Rhodopseudomonas palustris DX-1 10067204 YP_004111233.1 CDS Rpdx1_4959 NC_014834.1 5331723 5333306 R KEGG: bja:bll2703 hypothetical protein; hypothetical protein complement(5331723..5333306) Rhodopseudomonas palustris DX-1 10067205 YP_004111234.1 CDS Rpdx1_4960 NC_014834.1 5333465 5334475 R PFAM: Hsp33 protein; KEGG: bra:BRADO6776 HSP33-like chaperonin; Hsp33 protein complement(5333465..5334475) Rhodopseudomonas palustris DX-1 10067206 YP_004111235.1 CDS Rpdx1_4961 NC_014834.1 5334784 5335719 R TIGRFAM: ornithine carbamoyltransferase; KEGG: nha:Nham_0643 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; ornithine carbamoyltransferase complement(5334784..5335719) Rhodopseudomonas palustris DX-1 10067207 YP_004111236.1 CDS Rpdx1_4962 NC_014834.1 5335719 5336930 R TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: nha:Nham_0642 acetylornithine transaminase protein; PFAM: aminotransferase class-III; acetylornithine and succinylornithine aminotransferase complement(5335719..5336930) Rhodopseudomonas palustris DX-1 10067208 YP_004111237.1 CDS Rpdx1_4963 NC_014834.1 5337408 5337917 D PFAM: GcrA cell cycle regulator; KEGG: nha:Nham_0641 GcrA cell cycle regulator; GcrA cell cycle regulator 5337408..5337917 Rhodopseudomonas palustris DX-1 10067209 YP_004111238.1 CDS Rpdx1_4964 NC_014834.1 5338269 5338982 R TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bra:BRADO1679 two-component regulatory system response regulator; SMART: response regulator receiver; winged helix family two component transcriptional regulator complement(5338269..5338982) Rhodopseudomonas palustris DX-1 10067210 YP_004111239.1 CDS Rpdx1_4965 NC_014834.1 5339056 5339772 R KEGG: nha:Nham_0639 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU complement(5339056..5339772) Rhodopseudomonas palustris DX-1 10067211 YP_004111240.1 CDS Rpdx1_4966 NC_014834.1 5339796 5340620 R TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: nha:Nham_0638 phosphate ABC transporter permease; SMART: AAA ATPase; phosphate ABC transporter ATPase complement(5339796..5340620) Rhodopseudomonas palustris DX-1 10067212 YP_004111241.1 CDS Rpdx1_4967 NC_014834.1 5340617 5341480 R KEGG: bra:BRADO1676 high-affinity phosphate ABC transporter membrane protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(5340617..5341480) Rhodopseudomonas palustris DX-1 10067213 YP_004111242.1 CDS Rpdx1_4968 NC_014834.1 5341481 5342482 R KEGG: bja:blr1092 phosphate ABC transporter permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease complement(5341481..5342482) Rhodopseudomonas palustris DX-1 10067214 YP_004111243.1 CDS Rpdx1_4969 NC_014834.1 5342715 5343725 R KEGG: oca:OCAR_4646 phosphate ABC transporter; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; phosphate ABC transporter substrate-binding protein complement(5342715..5343725) Rhodopseudomonas palustris DX-1 10067215 YP_004111244.1 CDS Rpdx1_4970 NC_014834.1 5343858 5345222 R KEGG: bja:blr1090 phosphate regulon, two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase complement(5343858..5345222) Rhodopseudomonas palustris DX-1 10067216 YP_004111245.1 CDS Rpdx1_4971 NC_014834.1 5345226 5346260 R KEGG: bra:BRADO6783 hypothetical protein; hypothetical protein complement(5345226..5346260) Rhodopseudomonas palustris DX-1 10067217 YP_004111246.1 CDS Rpdx1_4972 NC_014834.1 5346493 5346789 R KEGG: nha:Nham_0632 hypothetical protein; hypothetical protein complement(5346493..5346789) Rhodopseudomonas palustris DX-1 10067218 YP_004111247.1 CDS Rpdx1_4973 NC_014834.1 5346793 5348187 R PFAM: OmpA/MotB domain protein; KEGG: bja:blr1084 hypothetical protein; OmpA/MotB domain-containing protein complement(5346793..5348187) Rhodopseudomonas palustris DX-1 10067219 YP_004111248.1 CDS Rpdx1_4974 NC_014834.1 5348342 5349400 D PFAM: polysaccharide deacetylase; KEGG: nha:Nham_0630 polysaccharide deacetylase; polysaccharide deacetylase 5348342..5349400 Rhodopseudomonas palustris DX-1 10067220 YP_004111249.1 CDS Rpdx1_4975 NC_014834.1 5349461 5350267 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_0751 putative short-chain dehydrogenase/reductase (SDR); short-chain dehydrogenase/reductase SDR 5349461..5350267 Rhodopseudomonas palustris DX-1 10067221 YP_004111250.1 CDS Rpdx1_4976 NC_014834.1 5350488 5351405 D PFAM: shikimate kinase; helix-turn-helix domain protein; KEGG: bja:bll1076 anaerobic benzoate catabolism transcriptional regulator; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator with shikimate kinase activity 5350488..5351405 Rhodopseudomonas palustris DX-1 10067222 YP_004111251.1 CDS Rpdx1_4977 NC_014834.1 5351413 5352741 R PFAM: extracellular solute-binding protein family 1; KEGG: nha:Nham_3686 extracellular solute-binding protein; family 1 extracellular solute-binding protein complement(5351413..5352741) Rhodopseudomonas palustris DX-1 10067223 YP_004111252.1 CDS Rpdx1_4978 NC_014834.1 5352947 5355028 D KEGG: bja:bll1031 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 5352947..5355028 Rhodopseudomonas palustris DX-1 10067224 YP_004111253.1 CDS Rpdx1_4979 NC_014834.1 5354998 5356737 D TIGRFAM: phage head-tail adaptor; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: nha:Nham_3684 response regulator receiver sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; response regulator receiver sensor signal transduction histidine kinase 5354998..5356737 Rhodopseudomonas palustris DX-1 10067225 YP_004111254.1 CDS Rpdx1_4980 NC_014834.1 5356734 5357474 D KEGG: bja:bll1029 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 5356734..5357474 Rhodopseudomonas palustris DX-1 10067226 YP_004111255.1 CDS Rpdx1_4981 NC_014834.1 5357707 5358318 D KEGG: bra:BRADO6834 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; ECF subfamily RNA polymerase sigma-24 subunit 5357707..5358318 Rhodopseudomonas palustris DX-1 10067227 YP_004111256.1 CDS Rpdx1_4982 NC_014834.1 5358853 5360259 D PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: oca:OCAR_4639 cytochrome d ubiquinol oxidase subunit 1; cytochrome bd ubiquinol oxidase subunit I 5358853..5360259 Rhodopseudomonas palustris DX-1 10067228 YP_004111257.1 CDS Rpdx1_4983 NC_014834.1 5360282 5361286 D KEGG: oca:OCAR_4638 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 5360282..5361286 Rhodopseudomonas palustris DX-1 10067229 YP_004111258.1 CDS Rpdx1_4984 NC_014834.1 5361460 5362047 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bra:BRADO6837 putative ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 5361460..5362047 Rhodopseudomonas palustris DX-1 10067230 YP_004111259.1 CDS Rpdx1_4985 NC_014834.1 5362090 5363124 D KEGG: bra:BRADO6838 general L-amino acid-binding periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 5362090..5363124 Rhodopseudomonas palustris DX-1 10067231 YP_004111260.1 CDS Rpdx1_4986 NC_014834.1 5363465 5364604 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1022 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(5363465..5364604) Rhodopseudomonas palustris DX-1 10067232 YP_004111261.1 CDS Rpdx1_4987 NC_014834.1 5364760 5365944 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1021 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(5364760..5365944) Rhodopseudomonas palustris DX-1 10067233 YP_004111262.1 CDS Rpdx1_4988 NC_014834.1 5366110 5366655 D PFAM: Carboxymuconolactone decarboxylase; KEGG: bbt:BBta_0701 hypothetical protein; carboxymuconolactone decarboxylase 5366110..5366655 Rhodopseudomonas palustris DX-1 10067234 YP_004111263.1 CDS Rpdx1_4990 NC_014834.1 5367972 5369219 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr1017 MFS permease; major facilitator superfamily protein complement(5367972..5369219) Rhodopseudomonas palustris DX-1 10067236 YP_004111264.1 CDS Rpdx1_4991 NC_014834.1 5369295 5370011 R PFAM: protein of unknown function DUF938; KEGG: bbt:BBta_0698 hypothetical protein; hypothetical protein complement(5369295..5370011) Rhodopseudomonas palustris DX-1 10067237 YP_004111265.1 CDS Rpdx1_4992 NC_014834.1 5370457 5372568 D PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bja:bll4766 hypothetical protein; TonB-dependent receptor plug 5370457..5372568 Rhodopseudomonas palustris DX-1 10067238 YP_004111266.1 CDS Rpdx1_4993 NC_014834.1 5372702 5372989 D KEGG: nwi:Nwi_2376 hypothetical protein; hypothetical protein 5372702..5372989 Rhodopseudomonas palustris DX-1 10067239 YP_004111267.1 CDS Rpdx1_4994 NC_014834.1 5373161 5373373 D KEGG: fma:FMG_0036 N-acetylmuramoyl-L-alanine amidase; hypothetical protein 5373161..5373373 Rhodopseudomonas palustris DX-1 10067240 YP_004111268.1 CDS Rpdx1_4995 NC_014834.1 5373782 5375002 D PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_7080 branched chain amino acid ABC transporter periplasmic-binding protein; extracellular ligand-binding receptor 5373782..5375002 Rhodopseudomonas palustris DX-1 10067241 YP_004111269.1 CDS Rpdx1_4996 NC_014834.1 5375257 5375910 D KEGG: bbt:BBta_0686 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5375257..5375910 Rhodopseudomonas palustris DX-1 10067242 YP_004111270.1 CDS Rpdx1_4997 NC_014834.1 5375907 5378372 D PFAM: protein of unknown function DUF214; KEGG: nha:Nham_0345 hypothetical protein; hypothetical protein 5375907..5378372 Rhodopseudomonas palustris DX-1 10067243 YP_004111271.1 CDS Rpdx1_4998 NC_014834.1 5378362 5379447 D KEGG: nha:Nham_0344 hypothetical protein; hypothetical protein 5378362..5379447 Rhodopseudomonas palustris DX-1 10067244 YP_004111272.1 CDS Rpdx1_4999 NC_014834.1 5379512 5379904 D PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); KEGG: bja:bll0998 hypothetical protein; eicosanoid and glutathione metabolism membrane-associated protein 5379512..5379904 Rhodopseudomonas palustris DX-1 10067245 YP_004111273.1 CDS Rpdx1_5000 NC_014834.1 5380097 5381290 R PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr0998 periplasmic substrate binding protein; extracellular ligand-binding receptor complement(5380097..5381290) Rhodopseudomonas palustris DX-1 10067246 YP_004111274.1 CDS Rpdx1_5001 NC_014834.1 5381376 5383061 R KEGG: oca:OCAR_5916 hypothetical protein; hypothetical protein complement(5381376..5383061) Rhodopseudomonas palustris DX-1 10067247 YP_004111275.1 CDS Rpdx1_5002 NC_014834.1 5383149 5385035 R KEGG: bbt:BBta_1326 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; Heat shock protein Hsp90-like protein complement(5383149..5385035) Rhodopseudomonas palustris DX-1 10067248 YP_004111276.1 CDS Rpdx1_5003 NC_014834.1 5385124 5386503 R KEGG: nha:Nham_1886 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase complement(5385124..5386503) Rhodopseudomonas palustris DX-1 10067249 YP_004111277.1 CDS Rpdx1_5004 NC_014834.1 5386500 5387165 R KEGG: nha:Nham_1885 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator complement(5386500..5387165) Rhodopseudomonas palustris DX-1 10067250 YP_004111278.1 CDS Rpdx1_5005 NC_014834.1 5387165 5387503 R KEGG: nha:Nham_1884 peptidase; hypothetical protein complement(5387165..5387503) Rhodopseudomonas palustris DX-1 10067251 YP_004111279.1 CDS Rpdx1_5006 NC_014834.1 5387588 5387896 R KEGG: mch:Mchl_2421 major facilitator superfamily MFS_1; hypothetical protein complement(5387588..5387896) Rhodopseudomonas palustris DX-1 10067252 YP_004111280.1 CDS Rpdx1_5007 NC_014834.1 5388080 5389204 R TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: bja:blr0961 methylthioribose-1-phosphate isomerase; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family complement(5388080..5389204) Rhodopseudomonas palustris DX-1 10067253 YP_004111281.1 CDS Rpdx1_5008 NC_014834.1 5389316 5390191 R TIGRFAM: methylthioadenosine phosphorylase; KEGG: bra:BRADO6904 5'-methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1; methylthioadenosine phosphorylase complement(5389316..5390191) Rhodopseudomonas palustris DX-1 10067254 YP_004111282.1 CDS Rpdx1_5009 NC_014834.1 5390482 5391621 D PFAM: iron-containing alcohol dehydrogenase; KEGG: bja:bll0995 maleylacetate reductase; iron-containing alcohol dehydrogenase 5390482..5391621 Rhodopseudomonas palustris DX-1 10067255 YP_004111283.1 CDS Rpdx1_5010 NC_014834.1 5391702 5393252 D PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll0994 acyl-CoA synthetase; AMP-dependent synthetase and ligase 5391702..5393252 Rhodopseudomonas palustris DX-1 10067256 YP_004111284.1 CDS Rpdx1_5011 NC_014834.1 5393507 5395360 D TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; helicase domain protein; DEAD/DEAH box helicase domain protein; HRDC domain protein; KEGG: bbt:BBta_6924 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein; ATP-dependent DNA helicase RecQ 5393507..5395360 Rhodopseudomonas palustris DX-1 10067257 YP_004111285.1 CDS Rpdx1_5012 NC_014834.1 5395441 5395668 D KEGG: azc:AZC_4413 hypothetical protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; FmdB family regulatory protein 5395441..5395668 Rhodopseudomonas palustris DX-1 10067258 YP_004111286.1 CDS Rpdx1_5013 NC_014834.1 5395693 5395986 R KEGG: nha:Nham_0415 hypothetical protein; hypothetical protein complement(5395693..5395986) Rhodopseudomonas palustris DX-1 10067259 YP_004111287.1 CDS Rpdx1_5014 NC_014834.1 5396227 5397813 D PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll0843 putative crotonobetaine/carnitine-CoA ligase; AMP-dependent synthetase and ligase 5396227..5397813 Rhodopseudomonas palustris DX-1 10067260 YP_004111288.1 CDS Rpdx1_5015 NC_014834.1 5397928 5399031 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: nha:Nham_4035 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase complement(5397928..5399031) Rhodopseudomonas palustris DX-1 10067261 YP_004111289.1 CDS Rpdx1_5016 NC_014834.1 5399107 5399616 D KEGG: nha:Nham_4036 hypothetical protein; hypothetical protein 5399107..5399616 Rhodopseudomonas palustris DX-1 10067262 YP_004111290.1 CDS Rpdx1_5017 NC_014834.1 5399673 5400344 D KEGG: bbt:BBta_7870 putative carboxymethylenebutenolidase; carboxymethylenebutenolidase 5399673..5400344 Rhodopseudomonas palustris DX-1 10067263 YP_004111291.1 CDS Rpdx1_5018 NC_014834.1 5400436 5401086 R PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bja:blr0835 polysaccharide export protein; polysaccharide export protein complement(5400436..5401086) Rhodopseudomonas palustris DX-1 10067264 YP_004111292.1 CDS Rpdx1_5019 NC_014834.1 5401255 5401911 R TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bja:blr0834 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase complement(5401255..5401911) Rhodopseudomonas palustris DX-1 10067265 YP_004111293.1 CDS Rpdx1_5020 NC_014834.1 5402080 5402397 R KEGG: bja:blr0833 hypothetical protein; hypothetical protein complement(5402080..5402397) Rhodopseudomonas palustris DX-1 10067266 YP_004111294.1 CDS Rpdx1_5021 NC_014834.1 5402756 5403022 D KEGG: bbt:BBta_7874 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; 30S ribosomal protein S20 5402756..5403022 Rhodopseudomonas palustris DX-1 10067267 YP_004111295.1 CDS Rpdx1_5022 NC_014834.1 5403811 5403978 R hypothetical protein complement(5403811..5403978) Rhodopseudomonas palustris DX-1 10067268 Rpdx1_R0001 tRNA Rpdx1_R0001 NC_014834.1 52463 52547 D tRNA-Leu 52463..52547 Rhodopseudomonas palustris DX-1 10062233 Rpdx1_R0002 tRNA Rpdx1_R0002 NC_014834.1 66463 66538 R tRNA-Ala complement(66463..66538) Rhodopseudomonas palustris DX-1 10062249 Rpdx1_R0003 tRNA Rpdx1_R0003 NC_014834.1 168588 168664 D tRNA-Arg 168588..168664 Rhodopseudomonas palustris DX-1 10062337 Rpdx1_R0004 tRNA Rpdx1_R0004 NC_014834.1 225936 226010 D tRNA-Glu 225936..226010 Rhodopseudomonas palustris DX-1 10062389 Rpdx1_R0005 tRNA Rpdx1_R0005 NC_014834.1 288164 288239 D tRNA-Ala 288164..288239 Rhodopseudomonas palustris DX-1 10062444 Rpdx1_R0006 tRNA Rpdx1_R0006 NC_014834.1 395547 395621 D tRNA-Gly 395547..395621 Rhodopseudomonas palustris DX-1 10062552 Rpdx1_R0007 tRNA Rpdx1_R0007 NC_014834.1 413401 413476 R tRNA-Thr complement(413401..413476) Rhodopseudomonas palustris DX-1 10062568 Rpdx1_R0008 tRNA Rpdx1_R0008 NC_014834.1 524046 524135 D tRNA-Ser 524046..524135 Rhodopseudomonas palustris DX-1 10062680 Rpdx1_R0009 tRNA Rpdx1_R0009 NC_014834.1 662954 663038 R tRNA-Leu complement(662954..663038) Rhodopseudomonas palustris DX-1 10062811 Rpdx1_R0011 tRNA Rpdx1_R0011 NC_014834.1 764317 764393 D tRNA-Arg 764317..764393 Rhodopseudomonas palustris DX-1 10062912 Rpdx1_R0012 tRNA Rpdx1_R0012 NC_014834.1 992749 992825 R tRNA-Arg complement(992749..992825) Rhodopseudomonas palustris DX-1 10063131 Rpdx1_R0013 tRNA Rpdx1_R0013 NC_014834.1 1140390 1140464 D tRNA-Val 1140390..1140464 Rhodopseudomonas palustris DX-1 10063267 Rpdx1_R0014 tRNA Rpdx1_R0014 NC_014834.1 1202607 1202681 D tRNA-Gln 1202607..1202681 Rhodopseudomonas palustris DX-1 10063326 Rpdx1_R0015 tRNA Rpdx1_R0015 NC_014834.1 1332273 1332349 D tRNA-Pro 1332273..1332349 Rhodopseudomonas palustris DX-1 10063448 Rpdx1_R0018 tRNA Rpdx1_R0018 NC_014834.1 1993769 1993845 D tRNA-Ile 1993769..1993845 Rhodopseudomonas palustris DX-1 10064069 Rpdx1_R0019 tRNA Rpdx1_R0019 NC_014834.1 1993879 1993954 D tRNA-Ala 1993879..1993954 Rhodopseudomonas palustris DX-1 10064070 Rpdx1_R0022 tRNA Rpdx1_R0022 NC_014834.1 2019774 2019847 R tRNA-Gln complement(2019774..2019847) Rhodopseudomonas palustris DX-1 10064097 Rpdx1_R0023 tRNA Rpdx1_R0023 NC_014834.1 2071110 2071198 D tRNA-Leu 2071110..2071198 Rhodopseudomonas palustris DX-1 10064144 Rpdx1_R0024 tRNA Rpdx1_R0024 NC_014834.1 2143001 2143075 R tRNA-Thr complement(2143001..2143075) Rhodopseudomonas palustris DX-1 10064228 Rpdx1_R0025 tRNA Rpdx1_R0025 NC_014834.1 2145391 2145476 D tRNA-Tyr 2145391..2145476 Rhodopseudomonas palustris DX-1 10064232 Rpdx1_R0026 tRNA Rpdx1_R0026 NC_014834.1 2212506 2212579 D tRNA-Gly 2212506..2212579 Rhodopseudomonas palustris DX-1 10064284 Rpdx1_R0027 tRNA Rpdx1_R0027 NC_014834.1 2292311 2292377 D tRNA-Ser 2292311..2292377 Rhodopseudomonas palustris DX-1 10064345 Rpdx1_R0028 tRNA Rpdx1_R0028 NC_014834.1 2317172 2317247 D tRNA-Trp 2317172..2317247 Rhodopseudomonas palustris DX-1 10064370 Rpdx1_R0029 tRNA Rpdx1_R0029 NC_014834.1 2415524 2415600 R tRNA-Arg complement(2415524..2415600) Rhodopseudomonas palustris DX-1 10064461 Rpdx1_R0030 tRNA Rpdx1_R0030 NC_014834.1 2428378 2428462 D tRNA-Leu 2428378..2428462 Rhodopseudomonas palustris DX-1 10064474 Rpdx1_R0031 tRNA Rpdx1_R0031 NC_014834.1 2671639 2671723 D tRNA-Leu 2671639..2671723 Rhodopseudomonas palustris DX-1 10064695 Rpdx1_R0032 tRNA Rpdx1_R0032 NC_014834.1 2681940 2682016 R tRNA-Val complement(2681940..2682016) Rhodopseudomonas palustris DX-1 10064701 Rpdx1_R0033 tRNA Rpdx1_R0033 NC_014834.1 2688775 2688851 D tRNA-Asp 2688775..2688851 Rhodopseudomonas palustris DX-1 10064706 Rpdx1_R0034 tRNA Rpdx1_R0034 NC_014834.1 2953641 2953718 R tRNA-Pro complement(2953641..2953718) Rhodopseudomonas palustris DX-1 10064981 Rpdx1_R0035 tRNA Rpdx1_R0035 NC_014834.1 3047627 3047702 D tRNA-Lys 3047627..3047702 Rhodopseudomonas palustris DX-1 10065075 Rpdx1_R0036 tRNA Rpdx1_R0036 NC_014834.1 3085276 3085350 D tRNA-Asn 3085276..3085350 Rhodopseudomonas palustris DX-1 10065113 Rpdx1_R0037 tRNA Rpdx1_R0037 NC_014834.1 3089090 3089163 D tRNA-Cys 3089090..3089163 Rhodopseudomonas palustris DX-1 10065118 Rpdx1_R0038 tRNA Rpdx1_R0038 NC_014834.1 3122480 3122556 D tRNA-Arg 3122480..3122556 Rhodopseudomonas palustris DX-1 10065140 Rpdx1_R0039 tRNA Rpdx1_R0039 NC_014834.1 3181104 3181180 R tRNA-Pro complement(3181104..3181180) Rhodopseudomonas palustris DX-1 10065218 Rpdx1_R0040 tRNA Rpdx1_R0040 NC_014834.1 3185365 3185439 D tRNA-Glu 3185365..3185439 Rhodopseudomonas palustris DX-1 10065224 Rpdx1_R0041 tRNA Rpdx1_R0041 NC_014834.1 3292676 3292769 D tRNA-Ser 3292676..3292769 Rhodopseudomonas palustris DX-1 10065318 Rpdx1_R0042 tRNA Rpdx1_R0042 NC_014834.1 3310829 3310918 D tRNA-Ser 3310829..3310918 Rhodopseudomonas palustris DX-1 10065338 Rpdx1_R0043 tRNA Rpdx1_R0043 NC_014834.1 3699850 3699925 R tRNA-Lys complement(3699850..3699925) Rhodopseudomonas palustris DX-1 10065688 Rpdx1_R0044 tRNA Rpdx1_R0044 NC_014834.1 4116859 4116935 R tRNA-Met complement(4116859..4116935) Rhodopseudomonas palustris DX-1 10066066 Rpdx1_R0045 tRNA Rpdx1_R0045 NC_014834.1 4164230 4164305 R tRNA-Met complement(4164230..4164305) Rhodopseudomonas palustris DX-1 10066112 Rpdx1_R0046 tRNA Rpdx1_R0046 NC_014834.1 4186126 4186200 D tRNA-Val 4186126..4186200 Rhodopseudomonas palustris DX-1 10066133 Rpdx1_R0047 tRNA Rpdx1_R0047 NC_014834.1 4460648 4460724 R tRNA-Met complement(4460648..4460724) Rhodopseudomonas palustris DX-1 10066377 Rpdx1_R0048 tRNA Rpdx1_R0048 NC_014834.1 4666143 4666217 D tRNA-OTHER 4666143..4666217 Rhodopseudomonas palustris DX-1 10066567 Rpdx1_R0049 tRNA Rpdx1_R0049 NC_014834.1 4676025 4676101 R tRNA-His complement(4676025..4676101) Rhodopseudomonas palustris DX-1 10066577 Rpdx1_R0052 tRNA Rpdx1_R0052 NC_014834.1 4994708 4994783 R tRNA-Ala complement(4994708..4994783) Rhodopseudomonas palustris DX-1 10066887 Rpdx1_R0053 tRNA Rpdx1_R0053 NC_014834.1 4994817 4994893 R tRNA-Ile complement(4994817..4994893) Rhodopseudomonas palustris DX-1 10066888 Rpdx1_R0056 tRNA Rpdx1_R0056 NC_014834.1 5086167 5086242 R tRNA-Phe complement(5086167..5086242) Rhodopseudomonas palustris DX-1 10066971 Rpdx1_R0057 tRNA Rpdx1_R0057 NC_014834.1 5095059 5095133 D tRNA-Thr 5095059..5095133 Rhodopseudomonas palustris DX-1 10066984 Rpdx1_R0058 tRNA Rpdx1_R0058 NC_014834.1 5195432 5195521 R tRNA-Ser complement(5195432..5195521) Rhodopseudomonas palustris DX-1 10067081 Rpdx1_R0059 tRNA Rpdx1_R0059 NC_014834.1 5314491 5314564 R tRNA-Gly complement(5314491..5314564) Rhodopseudomonas palustris DX-1 10067188 Rpdx1_R0017 rRNA Rpdx1_R0017 NC_014834.1 1992085 1993561 D 16S ribosomal RNA 1992085..1993561 Rhodopseudomonas palustris DX-1 10064068 Rpdx1_R0020 rRNA Rpdx1_R0020 NC_014834.1 1994350 1997171 D 23S ribosomal RNA 1994350..1997171 Rhodopseudomonas palustris DX-1 10064071 Rpdx1_R0021 rRNA Rpdx1_R0021 NC_014834.1 1997271 1997385 D 5S ribosomal RNA 1997271..1997385 Rhodopseudomonas palustris DX-1 10064072 Rpdx1_R0050 rRNA Rpdx1_R0050 NC_014834.1 4991278 4991392 R 5S ribosomal RNA complement(4991278..4991392) Rhodopseudomonas palustris DX-1 10066885 Rpdx1_R0051 rRNA Rpdx1_R0051 NC_014834.1 4991492 4994312 R 23S ribosomal RNA complement(4991492..4994312) Rhodopseudomonas palustris DX-1 10066886 Rpdx1_R0054 rRNA Rpdx1_R0054 NC_014834.1 4995101 4996577 R 16S ribosomal RNA complement(4995101..4996577) Rhodopseudomonas palustris DX-1 10066889