-- dump date   	20140620_032712
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004106379.1	TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: bbt:BBta_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase
YP_004106380.1	SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: nha:Nham_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain
YP_004106381.1	KEGG: bra:BRADO0003 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein
YP_004106382.1	SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: nha:Nham_0004 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein
YP_004106383.1	KEGG: mag:amb3054 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004106384.1	TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-4 domain protein; KEGG: rru:Rru_A2544 signal transduction histidine kinase; SMART: PAS domain containing protein
YP_004106385.1	PFAM: KaiB domain protein; KEGG: rru:Rru_A2543 KaiB
YP_004106386.1	PFAM: Circadian clock protein KaiC central region; KEGG: rsk:RSKD131_4430 circadian clock protein KaiC; SMART: AAA ATPase
YP_004106387.1	PFAM: chemotaxis sensory transducer; KEGG: bja:bll4376 hypothetical protein
YP_004106388.1	KEGG: bja:blr8125 transcriptional regulatory protein; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type
YP_004106389.1	KEGG: bbt:BBta_2219 hypothetical protein
YP_004106390.1	KEGG: vap:Vapar_3641 glutathione S-transferase domain protein
YP_004106391.1	KEGG: bra:BRADO2445 nitrogen fixation protein FixS; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type
YP_004106392.1	KEGG: bbt:BBta_2797 nitrogen fixation protein FixI; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase
YP_004106393.1	PFAM: FixH family protein; KEGG: bra:BRADO2443 nitrogen fixation protein FixH
YP_004106394.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: bbt:BBta_2795 nitrogen fixation protein
YP_004106395.1	KEGG: bra:BRADO2441 cytochrome-c oxidase FixP chain; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I
YP_004106396.1	KEGG: bra:BRADO2440 cytochrome oxidase subunit, FixQ
YP_004106397.1	KEGG: bbt:BBta_2793 cytochrome-c oxidase FixO chain; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO
YP_004106398.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; KEGG: bja:blr2763 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I
YP_004106399.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO0329 putative acetoin(diacetyl) reductase (acetoin dehydrogenase) (AR) (meso-2,3-butanediol dehydrogenase); oxidoreductase, short chain dehydrogenase; putative short chain dehydrogenase
YP_004106400.1	PFAM: DSBA oxidoreductase; KEGG: bja:blr0588 hypothetical protein
YP_004106401.1	PFAM: Glutathione S-transferase domain; KEGG: bja:bll0585 glutathione S-transferase family protein
YP_004106402.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oca:OCAR_4340 short chain dehydrogenase
YP_004106403.1	TIGRFAM: gamma-glutamyltransferase; KEGG: nha:Nham_0191 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_004106404.1	PFAM: major facilitator superfamily MFS_1; KEGG: nha:Nham_0192 major facilitator transporter
YP_004106405.1	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: mlo:mll4988 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004106406.1	SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: bja:blr0581 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein
YP_004106407.1	PFAM: Heparinase II/III family protein; KEGG: bja:blr0580 hypothetical protein
YP_004106408.1	PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: bja:blr0579 SUN protein
YP_004106409.1	PFAM: protein of unknown function DUF1674; KEGG: nha:Nham_0198 hypothetical protein
YP_004106410.1	manually curated; PFAM: nuclease (SNase domain protein); KEGG: nwi:Nwi_0154 nuclease; SMART: nuclease (SNase domain protein)
YP_004106411.1	KEGG: bra:BRADO0145 hypothetical protein
YP_004106412.1	PFAM: amine oxidase; KEGG: bbt:BBta_0209 amine oxidoreductase domain-containing protein
YP_004106413.1	KEGG: bra:BRADO0141 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit
YP_004106414.1	KEGG: bbt:BBta_0213 hypothetical protein
YP_004106415.1	KEGG: nwi:Nwi_0066 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein
YP_004106416.1	KEGG: nha:Nham_0075 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20
YP_004106417.1	KEGG: bbt:BBta_0216 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35
YP_004106418.1	manually curated; TIGRFAM: translation initiation factor IF-3; KEGG: bbt:BBta_0218 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like
YP_004106419.1	KEGG: nha:Nham_0078 hypothetical protein
YP_004106420.1	PFAM: domain of unknown function DUF1730; KEGG: bja:bll0714 iron-sulfur cluster binding protein
YP_004106421.1	PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_0222 putative glutathione S-transferase family protein
YP_004106422.1	KEGG: bja:blr0716 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA
YP_004106423.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: bra:BRADO0128 putative NAD dependent epimerase/dehydratase family protein
YP_004106424.1	KEGG: oca:OCAR_4455 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease
YP_004106425.1	PFAM: protein of unknown function DUF1239; KEGG: bja:blr0720 hypothetical protein
YP_004106426.1	PFAM: OstA family protein; KEGG: nha:Nham_0177 OstA-like protein
YP_004106428.1	KEGG: nwi:Nwi_0174 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004106429.1	KEGG: bbt:BBta_0121 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor core-binding region; sigma-54 factor; sigma-54 DNA-binding domain protein
YP_004106430.1	KEGG: bbt:BBta_0120 sigma 54 modulation protein / SSU ribosomal protein S30P; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA
YP_004106431.1	KEGG: bra:BRADO0111 nitrogen regulatory protein; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
YP_004106432.1	PFAM: protein of unknown function DUF1150; KEGG: bbt:BBta_0116 hypothetical protein
YP_004106433.1	PFAM: heat shock protein Hsp20; KEGG: oca:OCAR_4464 heat shock protein HSP20
YP_004106434.1	KEGG: bja:bll0730 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_004106435.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll0731 glycerol-3-phosphate ABC transporter membrane spanning protein
YP_004106436.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll0732 glycerol-3-phosphate ABC transporter permease protein
YP_004106437.1	PFAM: extracellular solute-binding protein family 1; KEGG: bja:bll0733 ABC transporter glycerol-3-phosphate-binding protein
YP_004106438.1	KEGG: bja:bll0734 hypothetical protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F
YP_004106439.1	PFAM: conserved hypothetical protein; KEGG: bja:bll0737 hypothetical protein
YP_004106440.1	KEGG: bra:BRADO0098 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YP_004106441.1	PFAM: protein of unknown function DUF374; KEGG: mag:amb4091 hypothetical protein
YP_004106442.1	TIGRFAM: cytidylate kinase; KEGG: bbt:BBta_0104 cytidylate kinase; PFAM: cytidylate kinase region
YP_004106443.1	KEGG: nha:Nham_0163 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein
YP_004106444.1	KEGG: bra:BRADO0095 S49 family peptidase; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49
YP_004106445.1	TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: bra:BRADO0094 integration host factor subunit beta; SMART: histone family protein DNA-binding protein
YP_004106446.1	KEGG: bja:blr0743 hypothetical protein
YP_004106447.1	KEGG: nwi:Nwi_0056 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)
YP_004106448.1	KEGG: bra:BRADO0091 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_004106449.1	TIGRFAM: tryptophan synthase, alpha subunit; KEGG: bbt:BBta_0096 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain
YP_004106450.1	KEGG: nha:Nham_0061 acetyl-CoA carboxylase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase
YP_004106451.1	TIGRFAM: FolC bifunctional protein; KEGG: nha:Nham_0060 FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_004106452.1	KEGG: oca:OCAR_4481 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain
YP_004106453.1	TIGRFAM: double-strand break repair helicase AddA; KEGG: bja:bll0752 putative helicase 2; PFAM: UvrD/REP helicase
YP_004106454.1	TIGRFAM: double-strand break repair protein AddB; KEGG: bbt:BBta_0089 DNA helicase/exodeoxyribonuclease V, subunit B
YP_004106455.1	PFAM: Nucleotidyl transferase; KEGG: bja:bll0754 nucleotidyltransferase family protein
YP_004106456.1	KEGG: bbt:BBta_0087 hypothetical protein
YP_004106457.1	PFAM: protein of unknown function UPF0079; aminoglycoside phosphotransferase; KEGG: nha:Nham_0054 hypothetical protein
YP_004106458.1	manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: nwi:Nwi_0045 histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_004106459.1	KEGG: bbt:BBta_0084 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase
YP_004106460.1	TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: bja:bll0759 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein
YP_004106461.1	KEGG: bbt:BBta_0082 2-octaprenylphenol hydroxylase; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein
YP_004106462.1	KEGG: bja:bll0761 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase
YP_004106463.1	TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: bbt:BBta_0080 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding
YP_004106464.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bja:bll0764 hypothetical protein
YP_004106465.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bra:BRADO0069 putative molybdopterin biosynthesis protein MoeB
YP_004106466.1	PFAM: protein of unknown function DUF894 DitE; KEGG: bja:blr0559 MFS permease
YP_004106467.1	KEGG: bra:BRADO0286 putative signal peptide
YP_004106468.1	PFAM: Phasin; KEGG: bja:blr3464 hypothetical protein
YP_004106469.1	KEGG: krh:KRH_09010 hypothetical protein
YP_004106470.1	KEGG: met:M446_4370 triple helix repeat-containing collagen
YP_004106471.1	KEGG: bma:BMAA1451.2 hypothetical protein
YP_004106472.1	PFAM: regulatory protein TetR; KEGG: bbt:BBta_2740 TetR family transcriptional regulator
YP_004106473.1	KEGG: bja:bll3835 hypothetical protein
YP_004106474.1	KEGG: nha:Nham_0992 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004106475.1	KEGG: nha:Nham_0993 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein
YP_004106476.1	PFAM: protein of unknown function DUF1078 domain protein; KEGG: bra:BRADO6624 putative flagellar basal-body rod protein (FlgC)
YP_004106477.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mrd:Mrad2831_4760 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004106478.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mrd:Mrad2831_4761 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004106479.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mrd:Mrad2831_4762 binding-protein-dependent transport systems inner membrane component
YP_004106480.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mrd:Mrad2831_4763 binding-protein-dependent transport systems inner membrane component
YP_004106481.1	PFAM: extracellular solute-binding protein family 5; KEGG: mrd:Mrad2831_4764 extracellular solute-binding protein
YP_004106483.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mrd:Mrad2831_4765 cobalamin synthesis protein P47K
YP_004106484.1	PFAM: Amidohydrolase 3; KEGG: mrd:Mrad2831_4766 amidohydrolase 3
YP_004106485.1	KEGG: mrd:Mrad2831_4755 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH
YP_004106486.1	PFAM: protein of unknown function DUF81; KEGG: mrd:Mrad2831_4756 hypothetical protein
YP_004106487.1	PFAM: Aldehyde Dehydrogenase; KEGG: mrd:Mrad2831_4757 aldehyde dehydrogenase
YP_004106488.1	PFAM: protein of unknown function DUF1486; KEGG: mrd:Mrad2831_4758 hypothetical protein
YP_004106489.1	PFAM: FAD dependent oxidoreductase; KEGG: bph:Bphy_6224 FAD dependent oxidoreductase
YP_004106490.1	KEGG: xau:Xaut_4360 hypothetical protein
YP_004106491.1	TIGRFAM: methyltransferase FkbM family; KEGG: smd:Smed_1809 FkbM family methyltransferase
YP_004106492.1	KEGG: azc:AZC_3956 hypothetical protein
YP_004106493.1	KEGG: ava:Ava_1003 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein
YP_004106494.1	PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: app:CAP2UW1_2571 TrkA-N domain protein
YP_004106495.1	PFAM: metallophosphoesterase; KEGG: bja:bll4141 hypothetical protein
YP_004106496.1	PFAM: metallophosphoesterase; KEGG: mlo:mll3631 3',5'-cyclic-nucleotide phosphodiesterase, CpdA
YP_004106497.1	PFAM: extracellular solute-binding protein family 1; KEGG: bmr:BMI_II1186 sugar ABC transporter, periplasmic sugar-binding protein, putative
YP_004106498.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmr:BMI_II1187 sugar ABC transporter, permease protein, putative
YP_004106499.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_1668 binding-protein-dependent transport systems inner membrane component
YP_004106500.1	KEGG: sil:SPO1823 sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_004106501.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azl:AZL_a10500 transcriptional regulator
YP_004106502.1	KEGG: tmz:Tmz1t_1807 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004106503.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_2682 binding-protein-dependent transport systems inner membrane component
YP_004106504.1	KEGG: sth:STH760 ABC transporter substrate-binding protein
YP_004106505.1	KEGG: dvu:DVU1771 [Fe] hydrogenase gamma; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit
YP_004106506.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: dvl:Dvul_1383 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004106507.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bbt:BBta_0531 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; response regulator receiver
YP_004106508.1	KEGG: bbt:BBta_7548 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28
YP_004106509.1	KEGG: nha:Nham_0503 hypothetical protein
YP_004106510.1	KEGG: nha:Nham_0504 helicase-like; PFAM: helicase domain protein; SMART: helicase domain protein
YP_004106511.1	KEGG: nha:Nham_0505 RNA-binding S4; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein
YP_004106512.1	KEGG: bja:bll0157 ferredoxin
YP_004106513.1	PFAM: transcription factor CarD; KEGG: bbt:BBta_7543 CarD family transcriptional regulator
YP_004106514.1	PFAM: peptidase M48 Ste24p; Peptidoglycan-binding lysin domain; KEGG: nha:Nham_0508 peptidase M48, Ste24p
YP_004106515.1	PFAM: nuclease (SNase domain protein); KEGG: nha:Nham_0509 nuclease (SNase-like)
YP_004106516.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:bll0144 substrate-binding protein
YP_004106517.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_7538 enoyl-CoA hydratase
YP_004106518.1	KEGG: bja:bll0142 hypothetical protein
YP_004106519.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr0140 putative enoyl-CoA hydratase
YP_004106520.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr0139 putative acyl-CoA dehydrogenase
YP_004106521.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr0138 hypothetical protein
YP_004106522.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll0137 oxidoreductase
YP_004106523.1	KEGG: oca:OCAR_4055 transglycosylase-associated protein
YP_004106524.1	PFAM: protein of unknown function DUF937; KEGG: nha:Nham_0511 hypothetical protein
YP_004106525.1	PFAM: Protein of unknown function DUF2134, membrane; KEGG: bbt:BBta_7591 hypothetical protein
YP_004106526.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr0103 oxidoreductase
YP_004106527.1	KEGG: bja:blr0101 hypothetical protein
YP_004106528.1	KEGG: bbt:BBta_7493 glutamate synthase domain-containing protein; PFAM: ferredoxin-dependent glutamate synthase
YP_004106529.1	PFAM: Creatininase; KEGG: nwi:Nwi_0330 creatininase
YP_004106530.1	KEGG: nha:Nham_0425 perplasmic binding protein of ABC transporter
YP_004106531.1	KEGG: bbt:BBta_7481 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004106532.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nha:Nham_0427 binding-protein-dependent transport systems inner membrane component
YP_004106533.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: nha:Nham_0428 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_004106534.1	KEGG: nha:Nham_0429 hypothetical protein
YP_004106535.1	PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: rle:RL1126 hypothetical protein
YP_004106536.1	KEGG: bra:BRADO0028 succinate-semialdehyde dehydrogenase [NADP+] (SSDH); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase
YP_004106537.1	KEGG: bja:blr0806 hypothetical protein
YP_004106538.1	PFAM: beta-lactamase; KEGG: bja:bll0805 hypothetical protein
YP_004106539.1	PFAM: AMP-dependent synthetase and ligase; KEGG: met:M446_2319 AMP-binding domain protein
YP_004106540.1	PFAM: PfkB domain protein; KEGG: nha:Nham_0010 PfkB
YP_004106541.1	KEGG: bja:bll0803 putative virulence factor; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein
YP_004106542.1	TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: nha:Nham_0012 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_004106543.1	KEGG: nwi:Nwi_0008 hypothetical protein
YP_004106544.1	PFAM: Scaffold protein Nfu/NifU ; nitrogen-fixing NifU domain protein; KEGG: bbt:BBta_0040 putative NifU protein
YP_004106545.1	PFAM: peptidase M22 glycoprotease; KEGG: nha:Nham_0018 peptidase M22, glycoprotease
YP_004106546.1	KEGG: bja:bll0798 putative acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004106547.1	PFAM: ferric-uptake regulator; KEGG: bra:BRADO0039 ferric uptake regulator family protein
YP_004106548.1	KEGG: bja:bll0796 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004106549.1	TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: bja:bll0795 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB
YP_004106550.1	KEGG: nha:Nham_0022 PhoH-like protein; PFAM: PhoH family protein; K Homology, type 1, subgroup; SMART: KH domain protein
YP_004106551.1	PFAM: protein of unknown function UPF0054; KEGG: nha:Nham_0023 hypothetical protein
YP_004106552.1	KEGG: bja:bll0792 magnesium and cobalt efflux protein; PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein
YP_004106553.1	KEGG: nha:Nham_0025 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004106554.1	KEGG: nha:Nham_0026 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004106555.1	PFAM: putative methyltransferase; KEGG: bra:BRADO0048 tRNA (guanine-N(7)-)-methyltransferase
YP_004106556.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: pla:Plav_0212 phytanoyl-CoA dioxygenase
YP_004106557.1	PFAM: Protein of unknown function DUF2336; KEGG: oca:OCAR_4513 hypothetical protein
YP_004106558.1	PFAM: protein of unknown function DUF150; KEGG: bbt:BBta_0054 hypothetical protein
YP_004106559.1	KEGG: bja:bll0785 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein
YP_004106560.1	PFAM: protein of unknown function DUF448; KEGG: nwi:Nwi_0023 hypothetical protein
YP_004106561.1	KEGG: bja:bll0783 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; elongation factor Tu domain 2 protein
YP_004106562.1	KEGG: bja:bll0782 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A
YP_004106563.1	KEGG: nwi:Nwi_0026 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein
YP_004106564.1	KEGG: nwi:Nwi_0027 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15
YP_004106565.1	SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: nwi:Nwi_0028 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein
YP_004106566.1	PFAM: Manganese/iron superoxide dismutase-like; KEGG: oca:OCAR_4502 superoxide dismutase
YP_004106567.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; chemotaxis sensory transducer; KEGG: bbt:BBta_2308 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein
YP_004106568.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nwi:Nwi_0029 regulatory protein, LysR
YP_004106569.1	KEGG: mes:Meso_0626 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase
YP_004106570.1	KEGG: azo:azo3831 hypothetical protein
YP_004106571.1	KEGG: nha:Nham_0446 beta-lactamase; PFAM: beta-lactamase
YP_004106572.1	KEGG: nha:Nham_1339 hypothetical protein
YP_004106573.1	KEGG: bja:blr7337 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein
YP_004106574.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bja:blr7336 pseudouridine synthase-like protein; SMART: RNA-binding S4 domain protein
YP_004106575.1	KEGG: bja:bll7335 hypothetical protein
YP_004106576.1	KEGG: mea:Mex_1p0058 hypothetical protein
YP_004106577.1	KEGG: bmb:BruAb1_0263 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004106578.1	PFAM: protein of unknown function DUF955; KEGG: bov:BOV_0254 zinc-dependent metallopeptidase
YP_004106579.1	KEGG: rpf:Rpic12D_4679 hypothetical protein
YP_004106580.1	PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: met:M446_7059 hypothetical protein
YP_004106581.1	KEGG: sbi:SORBI_01g043300 hypothetical protein
YP_004106582.1	KEGG: scb:SCAB_19301 hypothetical protein
YP_004106583.1	SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; manually curated; TIGRFAM: diguanylate cyclase; PAS sensor protein; KEGG: tgr:Tgr7_2681 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein
YP_004106584.1	KEGG: mgm:Mmc1_0771 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_004106585.1	KEGG: oan:Oant_0505 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type
YP_004106586.1	KEGG: mlo:mll6589 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain
YP_004106587.1	KEGG: bja:blr6070 putative alcohol dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein
YP_004106588.1	PFAM: ChaB family protein; KEGG: tcx:Tcr_2071 ChaB
YP_004106589.1	TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: bja:bll4651 hypothetical protein; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004106590.1	PFAM: UspA domain protein; KEGG: nha:Nham_1926 hypothetical protein
YP_004106591.1	PFAM: glycoside hydrolase family 4; KEGG: bra:BRADO2867 putative alpha-galactosidase (melibiase)
YP_004106592.1	TIGRFAM: 1-phosphofructokinase; KEGG: bbt:BBta_6479 6-phosphofructokinase; PFAM: PfkB domain protein
YP_004106593.1	KEGG: bbt:BBta_3664 putative oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase
YP_004106594.1	KEGG: bra:BRADO6613 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase
YP_004106595.1	KEGG: msl:Msil_0213 glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1
YP_004106596.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pzu:PHZ_c3300 enoyl-CoA hydratase
YP_004106597.1	KEGG: nwi:Nwi_0335 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC
YP_004106598.1	KEGG: bja:bll5764 hypothetical protein
YP_004106599.1	TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: nha:Nham_0450 hypothetical protein; SMART: Ku domain protein
YP_004106600.1	KEGG: nha:Nham_0431 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24
YP_004106601.1	PFAM: sodium/hydrogen exchanger; transporter-associated region; KEGG: nwi:Nwi_0337 potassium/proton antiporter
YP_004106602.1	PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: nwi:Nwi_0341 penicillin-insensitive murein endopeptidase
YP_004106603.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bja:bll8156 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_004106604.1	KEGG: rru:Rru_A1289 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase
YP_004106605.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: met:M446_5547 transposase IS116/IS110/IS902 family protein
YP_004106606.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cak:Caul_4355 transposase IS116/IS110/IS902 family protein
YP_004106607.1	TIGRFAM: argininosuccinate synthase; KEGG: oca:OCAR_4294 argininosuccinate synthase; PFAM: argininosuccinate synthase
YP_004106608.1	PFAM: phosphoesterase PA-phosphatase related; KEGG: nwi:Nwi_2804 phosphoesterase, PA-phosphatase related
YP_004106609.1	KEGG: bra:BRADO0245 hypothetical protein
YP_004106610.1	KEGG: bac:BamMC406_4894 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region
YP_004106611.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bbt:BBta_0241 putative pyruvate formate lyase activating enzyme 2 (YfgB); SMART: Elongator protein 3/MiaB/NifB
YP_004106612.1	KEGG: nha:Nham_3627 hypothetical protein
YP_004106613.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll0527 oxidoreductase
YP_004106614.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_0243 putative quinone oxidoreductase (NADPH) and Zn-dependent alcohol dehydrogenase
YP_004106615.1	KEGG: bbt:BBta_7528 putative phytoene dehydrogenase and related proteins; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase
YP_004106616.1	PFAM: regulatory protein TetR; KEGG: ank:AnaeK_2962 transcriptional regulator, TetR family
YP_004106617.1	PFAM: protein of unknown function DUF1232; KEGG: bja:bll0531 hypothetical protein
YP_004106618.1	PFAM: transcriptional coactivator/pterin dehydratase; KEGG: nwi:Nwi_2809 pterin-4-alpha-carbinolamine dehydratase
YP_004106619.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:blr0533 hypothetical protein
YP_004106620.1	KEGG: mpo:Mpop_0228 PepSY-associated TM helix domain protein
YP_004106621.1	KEGG: azl:AZL_004810 iron complex outermembrane recepter protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug
YP_004106622.1	KEGG: bra:BRADO0265 GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A); TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein
YP_004106623.1	PFAM: amine oxidase; KEGG: bja:blr0541 hypothetical protein
YP_004106624.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr0547 hypothetical protein
YP_004106625.1	KEGG: bja:blr0548 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase
YP_004106626.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bra:BRADO0276 hypothetical protein
YP_004106627.1	KEGG: nha:Nham_0609 methylenetetrahydrofolate dehydrogenase (NADP+); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_004106628.1	PFAM: protein of unknown function DUF167; KEGG: nwi:Nwi_0479 hypothetical protein
YP_004106629.1	KEGG: nwi:Nwi_0478 hypothetical protein; manually curated; PFAM: protein of unknown function YGGT
YP_004106630.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:bll0552 enoyl-CoA hydratase
YP_004106631.1	KEGG: vei:Veis_3840 hypothetical protein
YP_004106632.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nha:Nham_0606 short-chain dehydrogenase/reductase SDR
YP_004106633.1	KEGG: nha:Nham_0605 hypothetical protein
YP_004106634.1	PFAM: cytochrome P450; KEGG: bbt:BBta_0276 putative cytochrome P450 hydroxylase superfamily protein
YP_004106635.1	KEGG: bja:bll0766 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region
YP_004106636.1	PFAM: protein of unknown function DUF1058; KEGG: bja:blr0767 hypothetical protein
YP_004106637.1	KEGG: oca:OCAR_4496 ferric uptake regulator, FUR family; manually curated; PFAM: ferric-uptake regulator
YP_004106638.1	TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: nwi:Nwi_0034 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
YP_004106639.1	PFAM: Beta-ketoacyl synthase; KEGG: oca:OCAR_4498 3-oxoacyl-(acyl carrier protein) synthase I
YP_004106640.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr0771 enoyl-(acyl carrier protein) reductase
YP_004106641.1	KEGG: bbt:BBta_7365 phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP)
YP_004106642.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bja:bll8143 hypothetical protein
YP_004106643.1	KEGG: bja:blr8144 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004106644.1	KEGG: nha:Nham_0442 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein
YP_004106645.1	KEGG: bbt:BBta_7369 HPr kinase
YP_004106646.1	PFAM: PTS system fructose subfamily IIA component; KEGG: nha:Nham_0440 PTS system fructose subfamily IIA component
YP_004106647.1	KEGG: nha:Nham_0439 HPrNtr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr
YP_004106648.1	KEGG: bra:BRADO0839 hypothetical protein
YP_004106649.1	KEGG: bbt:BBta_7374 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein
YP_004106650.1	KEGG: ade:Adeh_3444 hypothetical protein
YP_004106651.1	KEGG: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr
YP_004106652.1	KEGG: ade:Adeh_3442 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase
YP_004106653.1	PFAM: alpha/beta hydrolase fold; KEGG: mac:MA2691 lipolytic enzyme
YP_004106654.1	KEGG: bpt:Bpet0058 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase
YP_004106655.1	KEGG: nwi:Nwi_0060 CysZ-like protein
YP_004106657.1	KEGG: rce:RC1_2083 magnesium-chelatase 30 kDa subunit; TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold
YP_004106658.1	PFAM: peptidase S10 serine carboxypeptidase; KEGG: bja:bll5514 hypothetical protein
YP_004106659.1	SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: bbt:BBta_0201 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop
YP_004106660.1	KEGG: nwi:Nwi_0204 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2244, transmembrane
YP_004106661.1	TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll0687 transcriptional regulatory protein; SMART: Helix-turn-helix, AraC domain
YP_004106662.1	TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: mrd:Mrad2831_4623 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein
YP_004106663.1	TIGRFAM: dihydrodipicolinate reductase; KEGG: nha:Nham_0158 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase
YP_004106664.1	PFAM: protein of unknown function DUF1330; KEGG: bra:BRADO0159 hypothetical protein
YP_004106665.1	TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: bja:blr0683 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase
YP_004106666.1	PFAM: NADPH-dependent FMN reductase; KEGG: bja:blr0682 putative oxidoreductase
YP_004106667.1	KEGG: bbt:BBta_0193 phospholipid N-methyltransferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like
YP_004106668.1	TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: nha:Nham_0156 chaperone DnaJ; SMART: heat shock protein DnaJ domain protein
YP_004106669.1	KEGG: bbt:BBta_0191 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70
YP_004106670.1	KEGG: bja:bll0679 hypothetical protein
YP_004106671.1	PFAM: GrpE protein; KEGG: bbt:BBta_0188 protein GrpE (HSP-70 cofactor)
YP_004106672.1	KEGG: nha:Nham_0152 heat-inducible transcription repressor; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like
YP_004106673.1	TIGRFAM: ribonuclease PH; KEGG: nha:Nham_0151 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2
YP_004106674.1	KEGG: bbt:BBta_0185 putative deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein
YP_004106675.1	TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: bra:BRADO0175 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004106676.1	PFAM: Extracellular ligand-binding receptor; KEGG: nha:Nham_0148 extracellular ligand-binding receptor
YP_004106677.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bja:bll0670 hypothetical protein
YP_004106678.1	PFAM: protein of unknown function UPF0102; KEGG: bra:BRADO0179 hypothetical protein
YP_004106679.1	TIGRFAM: glutathione synthetase; KEGG: nha:Nham_0145 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein
YP_004106680.1	KEGG: bbt:BBta_7112 LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR
YP_004106681.1	PFAM: autoinducer synthesis protein; KEGG: bra:BRADO0941 putative autoinducer (acylhomoserine lactone) synthase
YP_004106682.1	KEGG: smt:Smal_0037 TonB-dependent receptor
YP_004106683.1	TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: bja:bll0661 hypothetical protein; SMART: AAA ATPase
YP_004106684.1	KEGG: nha:Nham_0129 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver
YP_004106685.1	KEGG: oca:OCAR_4402 hypothetical protein
YP_004106686.1	TIGRFAM: pantothenate kinase; KEGG: nha:Nham_0128 pantothenate kinase
YP_004106687.1	KEGG: bja:blr0655 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like
YP_004106688.1	KEGG: nha:Nham_0126 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein
YP_004106689.1	TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: bbt:BBta_0145 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein
YP_004106690.1	KEGG: cac:CAC1202 hypothetical protein
YP_004106691.1	KEGG: bbt:BBta_0146 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I
YP_004106692.1	KEGG: nwi:Nwi_0125 hypothetical protein
YP_004106693.1	KEGG: bja:blr0650 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase
YP_004106694.1	PFAM: 20S proteasome A and B subunits; KEGG: nha:Nham_0121 ATP-dependent protease peptidase subunit
YP_004106695.1	TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: nwi:Nwi_0129 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase
YP_004106696.1	KEGG: bra:BRADO0206 putative Smr protein/MutS2 C-terminal; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2
YP_004106697.1	PFAM: MltA domain protein; 3D domain protein; KEGG: nha:Nham_0118 MltA
YP_004106698.1	KEGG: bja:blr0642 hypothetical protein; manually curated; PFAM: import inner membrane translocase subunit Tim44
YP_004106699.1	KEGG: nwi:Nwi_0106 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB
YP_004106700.1	SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bja:blr0640 DNA polymerase III epsilon chain; PFAM: Exonuclease RNase T and DNA polymerase III
YP_004106701.1	TIGRFAM: dephospho-CoA kinase; KEGG: nha:Nham_0114 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase
YP_004106702.1	PFAM: Maf family protein; KEGG: bja:blr0638 Maf-like protein
YP_004106703.1	PFAM: protein of unknown function DUF299; KEGG: bbt:BBta_0161 hypothetical protein
YP_004106704.1	PFAM: conserved hypothetical protein; KEGG: bbt:BBta_0162 hypothetical protein
YP_004106705.1	TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: nwi:Nwi_0100 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase
YP_004106706.1	SMART: AAA ATPase; manually curated; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; KEGG: bja:bll0634 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related
YP_004106707.1	KEGG: nwi:Nwi_0097 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A
YP_004106708.1	KEGG: bbt:BBta_0166 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein
YP_004106709.1	KEGG: nha:Nham_0103 cobyrinic acid a,c-diamide synthase
YP_004106710.1	TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: nwi:Nwi_0094 ParB-like partition protein; SMART: ParB domain protein nuclease
YP_004106711.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sme:SM_b20636 putative transposase of insertion sequence ISRm19 protein
YP_004106712.1	KEGG: bja:blr0629 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta
YP_004106713.1	PFAM: Protein of unknown function DUF2159, secreted; KEGG: nha:Nham_0099 hypothetical protein
YP_004106714.1	KEGG: bbt:BBta_0171 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase
YP_004106715.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bja:blr0624 hypothetical protein; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein
YP_004106716.1	PFAM: alanine racemase domain protein; KEGG: bra:BRADO0186 putative signal peptide
YP_004106717.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_0095 hypothetical protein
YP_004106718.1	KEGG: bja:bll0620 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004106719.1	KEGG: bja:bll0619 hypothetical protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding
YP_004106720.1	KEGG: bra:BRADO0181 putative exodeoxyribonuclease III (XthA); TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_004106721.1	PFAM: Methyltransferase type 12; KEGG: msl:Msil_3873 methyltransferase type 12
YP_004106722.1	PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bra:BRADO0223 putative signal peptide
YP_004106723.1	KEGG: bja:blr0616 cell division protein; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase
YP_004106724.1	PFAM: aminotransferase class I and II; KEGG: nha:Nham_0089 aminotransferase, class I and II
YP_004106725.1	PFAM: protein of unknown function DUF86; KEGG: mrd:Mrad2831_3537 hypothetical protein
YP_004106726.1	PFAM: DNA polymerase beta domain protein region; KEGG: cak:Caul_1178 DNA polymerase beta subunit
YP_004106727.1	KEGG: bja:blr0613 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter
YP_004106728.1	PFAM: nitrogen regulatory protein P-II; KEGG: bja:blr0612 nitrogen regulatory protein PII
YP_004106729.1	PFAM: nitrogen regulatory protein P-II; KEGG: bbt:BBta_0295 nitrogen regulatory protein P-II
YP_004106730.1	KEGG: bbt:BBta_0297 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase
YP_004106731.1	KEGG: nwi:Nwi_0079 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding
YP_004106732.1	PFAM: protein of unknown function DUF343; KEGG: nha:Nham_0083 hypothetical protein
YP_004106733.1	KEGG: bja:blr0595 hypothetical protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein
YP_004106734.1	KEGG: bra:BRADO0321 putative thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain
YP_004106735.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: azl:AZL_019970 membrane bound O-acyl transferase
YP_004106736.1	KEGG: bav:BAV2623 cellulose acetylase subunit
YP_004106737.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msl:Msil_2835 binding-protein-dependent transport systems inner membrane component
YP_004106738.1	KEGG: msl:Msil_2834 twin-arginine translocation pathway signal
YP_004106739.1	KEGG: msl:Msil_2833 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004106740.1	KEGG: bra:BRADO2770 putative thiosulfate sulfurtransferase (rhodanese-like protein); PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_004106741.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mno:Mnod_1706 putative acyl-CoA dehydrogenase
YP_004106742.1	PFAM: OsmC family protein; KEGG: xau:Xaut_2612 OsmC family protein
YP_004106743.1	PFAM: regulatory protein TetR; KEGG: bja:blr5739 transcriptional regulatory protein
YP_004106744.1	PFAM: acyltransferase 3; KEGG: oca:OCAR_5879 acyltransferase 3
YP_004106745.1	PFAM: protein of unknown function UPF0047; KEGG: cts:Ctha_1708 protein of unknown function UPF0047
YP_004106746.1	KEGG: alv:Alvin_2545 ribulose-bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain
YP_004106747.1	KEGG: nwi:Nwi_2399 hypothetical protein
YP_004106748.1	manually curated; KEGG: rce:RC1_2117 coenzyme B12-binding aerobic repressor
YP_004106749.1	KEGG: avi:Avi_4013 methyl-accepting chemotaxis protein; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein
YP_004106750.1	PFAM: HemY domain protein; KEGG: bja:bll0564 hypothetical protein
YP_004106751.1	KEGG: nha:Nham_0564 hypothetical protein
YP_004106752.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: bja:bll0566 uroporphyrinogen III synthase
YP_004106753.1	TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: nwi:Nwi_0470 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease
YP_004106754.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bbt:BBta_0290 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
YP_004106755.1	PFAM: protein of unknown function DUF55; KEGG: bja:blr0569 hypothetical protein
YP_004106756.1	KEGG: xau:Xaut_1107 hypothetical protein
YP_004106757.1	TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; KEGG: bra:BRADO0384 putative MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB
YP_004106758.1	KEGG: nwi:Nwi_2776 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase
YP_004106759.1	PFAM: transcription activator effector binding; KEGG: bja:blr0478 hypothetical protein
YP_004106760.1	PFAM: protein of unknown function DUF541; KEGG: nha:Nham_3577 hypothetical protein
YP_004106761.1	KEGG: bra:BRADO0380 putative metallo-hydrolase/oxidoreductase
YP_004106762.1	PFAM: PilT protein domain protein; KEGG: sus:Acid_1772 PilT protein
YP_004106763.1	TIGRFAM: prevent-host-death family protein; KEGG: sus:Acid_1771 prevent-host-death family protein
YP_004106764.1	TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: bbt:BBta_0368 signal recognition particle subunit FFH/SRP54 (SRP54); SMART: AAA ATPase
YP_004106765.1	KEGG: bra:BRADO0378 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16
YP_004106766.1	KEGG: bja:blr0483 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein
YP_004106767.1	TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: bja:blr0486 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase
YP_004106768.1	KEGG: nha:Nham_3582 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19
YP_004106769.1	KEGG: nha:Nham_3584 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein
YP_004106770.1	KEGG: nha:Nham_3587 hypothetical protein
YP_004106771.1	KEGG: bbt:BBta_0355 hypothetical protein
YP_004106772.1	KEGG: bra:BRADO0367 hypothetical protein
YP_004106773.1	PFAM: protein of unknown function DUF1025; KEGG: bja:blr0494 hypothetical protein
YP_004106774.1	KEGG: bja:blr0495 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein
YP_004106775.1	KEGG: mag:amb3991 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004106776.1	KEGG: bbt:BBta_0347 putative citrate lyase beta chain; PFAM: HpcH/HpaI aldolase
YP_004106777.1	KEGG: bbt:BBta_0346 putative carbonic anhydrase 2; PFAM: carbonic anhydrase
YP_004106778.1	PFAM: conserved hypothetical protein; KEGG: bbt:BBta_0345 hypothetical protein
YP_004106779.1	TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: bbt:BBta_0344 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding
YP_004106780.1	KEGG: bbt:BBta_0343 hypothetical protein
YP_004106781.1	KEGG: nha:Nham_3594 hypothetical protein
YP_004106782.1	KEGG: rle:RL2002 putative transposase-related protein; manually curated; PFAM: transposase IS4 family protein
YP_004106783.1	TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: nha:Nham_3595 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_004106784.1	KEGG: bbt:BBta_7330 hypothetical protein
YP_004106785.1	KEGG: bja:blr0503 hypothetical protein
YP_004106786.1	PFAM: oxidoreductase molybdopterin binding; KEGG: nha:Nham_3598 oxidoreductase, molybdopterin binding
YP_004106787.1	KEGG: nha:Nham_3599 hypothetical protein
YP_004106788.1	KEGG: bbt:BBta_0336 Fas1 domain-containing protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin
YP_004106789.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0226 malonyl-CoA synthase
YP_004106790.1	KEGG: met:M446_3953 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein
YP_004106791.1	manually curated; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; KEGG: bja:blr0512 succinate dehydrogenase cytochrome b-556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit
YP_004106792.1	KEGG: nha:Nham_3617 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit
YP_004106793.1	KEGG: bbt:BBta_0230 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_004106794.1	KEGG: bja:blr0515 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_004106795.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bbt:BBta_0235 hypothetical protein
YP_004106796.1	KEGG: bbt:BBta_0236 hypothetical protein
YP_004106797.1	KEGG: lma:LmjF35.0290 hypothetical protein
YP_004106798.1	PFAM: OmpA/MotB domain protein; KEGG: bbt:BBta_0237 OmpA family protein
YP_004106799.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr0574 hypothetical protein
YP_004106800.1	KEGG: bra:BRADO0344 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase
YP_004106801.1	PFAM: pseudouridine synthase; KEGG: bra:BRADO0385 putative RNA pseudouridine synthase (uracil hydrolyase)
YP_004106802.1	TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: nha:Nham_0402 signal recognition particle-docking protein FtsY; SMART: AAA ATPase
YP_004106803.1	KEGG: nwi:Nwi_0317 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A
YP_004106804.1	KEGG: mch:Mchl_2719 hypothetical protein
YP_004106805.1	KEGG: nwi:Nwi_0318 periplasmic protein thiol-disulfide oxidoreductase DsbE; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein
YP_004106806.1	KEGG: nha:Nham_0412 heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD)
YP_004106807.1	KEGG: nwi:Nwi_0320 cytochrome c-type biogenesis protein CcmC; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein
YP_004106808.1	KEGG: bja:blr0468 heme exporter protein B; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB
YP_004106809.1	TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: bja:blr0467 cytochrome c biogenesis protein CcmA; SMART: AAA ATPase
YP_004106810.1	KEGG: bbt:BBta_0382 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein
YP_004106811.1	PFAM: protein of unknown function DUF1223; KEGG: bja:bll0465 hypothetical protein
YP_004106812.1	KEGG: nha:Nham_0406 hypothetical protein
YP_004106813.1	KEGG: bja:blr0463 acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004106814.1	PFAM: protein of unknown function UPF0005; KEGG: oca:OCAR_4575 integral membrane protein
YP_004106815.1	PFAM: protein of unknown function DUF214; KEGG: bja:blr0461 ABC transporter permease
YP_004106816.1	KEGG: bja:blr0460 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004106817.1	PFAM: lipolytic protein G-D-S-L family; KEGG: bra:BRADO0400 multifunctional: acyl-CoA thioesterase I; protease I; lysophospholipasel(I)
YP_004106818.1	KEGG: bra:BRADO0401 putative 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX
YP_004106819.1	PFAM: AFG1-family ATPase; KEGG: bra:BRADO0402 AFG1 family ATPase
YP_004106820.1	KEGG: bbt:BBta_0392 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase
YP_004106821.1	TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: oca:OCAR_6554 succinyl-CoA synthetase beta chain (SCS-alpha); PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase
YP_004106822.1	KEGG: bbt:BBta_0394 succinyl-CoA synthetase (ADP-forming) alpha subunit; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein
YP_004106823.1	KEGG: bbt:BBta_0395 2-oxoglutarate dehydrogenase E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component
YP_004106824.1	KEGG: bra:BRADO0407 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein
YP_004106825.1	KEGG: bmr:BMI_I1943 hypothetical protein
YP_004106826.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO0408 oxidoreductase
YP_004106827.1	KEGG: bbt:BBta_0398 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region
YP_004106828.1	KEGG: bja:bll0448 hypothetical protein
YP_004106829.1	KEGG: rmr:Rmar_2078 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter
YP_004106830.1	KEGG: oca:OCAR_4586 hypothetical protein
YP_004106831.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bja:blr0446 site-specific tyrosine recombinase XerC
YP_004106832.1	TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: nha:Nham_0535 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein
YP_004106833.1	KEGG: bja:blr044 hypothetical protein; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A
YP_004106834.1	KEGG: nwi:Nwi_0429 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit
YP_004106835.1	KEGG: nha:Nham_0532 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein
YP_004106836.1	KEGG: nha:Nham_0531 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit
YP_004106837.1	TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: nha:Nham_0529 F0F1 ATP synthase subunit beta; SMART: AAA ATPase
YP_004106838.1	KEGG: nwi:Nwi_0434 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like
YP_004106839.1	PFAM: NUDIX hydrolase; KEGG: bja:blr0437 dinucleoside polyphosphate hydrolase
YP_004106840.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: NAD-dependent epimerase/dehydratase
YP_004106841.1	KEGG: mea:Mex_1p4746 hypothetical protein
YP_004106842.1	PFAM: NUDIX hydrolase; KEGG: bja:blr0436 dinucleoside polyphosphate hydrolase
YP_004106843.1	PFAM: protein of unknown function DUF610 YibQ; KEGG: nha:Nham_0526 protein of unknown function DUF610, YibQ
YP_004106844.1	SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: bja:blr0434 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein
YP_004106845.1	KEGG: nha:Nham_0524 peptidase M23B; manually curated; PFAM: Peptidase M23
YP_004106846.1	PFAM: protein of unknown function DUF163; KEGG: bra:BRADO0427 hypothetical protein
YP_004106847.1	KEGG: bbt:BBta_0417 hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein
YP_004106848.1	TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; KEGG: bja:blr0430 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase
YP_004106849.1	KEGG: bja:blr0429 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase
YP_004106850.1	TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: mpo:Mpop_0594 putative addiction module antidote protein, CopG/Arc/MetJ family
YP_004106851.1	TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: bbt:BBta_0422 gamma-glutamyl kinase; SMART: PUA domain containing protein
YP_004106852.1	KEGG: bra:BRADO0432 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related
YP_004106853.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbt:BBta_0424 DMT family permease
YP_004106854.1	KEGG: der:Dere_GG10289 GG10289 gene product from transcript GG10289-RA
YP_004106855.1	KEGG: ecb:100060039 hypothetical LOC100060039
YP_004106856.1	PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_0516 GCN5-related N-acetyltransferase
YP_004106857.1	KEGG: nha:Nham_0515 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27
YP_004106858.1	KEGG: nha:Nham_0514 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21
YP_004106859.1	KEGG: bra:BRADO0437 putative glucokinase
YP_004106860.1	KEGG: bja:bll1985 HipA protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein
YP_004106861.1	KEGG: bja:bsl1986 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004106862.1	PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: bja:bll6944 HupU protein
YP_004106863.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: bja:bll6943 HupV protein
YP_004106864.1	TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: bja:bll6942 uptake hydrogenase precursor; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit
YP_004106865.1	PFAM: nickel-dependent hydrogenase large subunit; KEGG: bbt:BBta_1997 uptake hydrogenase large subunit precursor
YP_004106866.1	TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; KEGG: bja:blr6947 Ni/Fe-hydrogenase B-type cytochrome subunit
YP_004106867.1	KEGG: bja:bll6939 HupD protein; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein
YP_004106868.1	KEGG: xau:Xaut_2188 HupE/UreJ protein
YP_004106869.1	KEGG: bja:bsl6938 hydrogenase expression/formation protein; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC)
YP_004106870.1	PFAM: hydrogenase-1 expression HyaE; KEGG: bra:BRADO1689 hydrogenase expression/formation protein HupG
YP_004106871.1	PFAM: HupH hydrogenase expression protein; KEGG: bra:BRADO1690 hydrogenase expression/formation protein HupH
YP_004106872.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: azo:azo3796 rubredoxin protein
YP_004106873.1	KEGG: bbt:BBta_2004 hydrogenase expression/formation
YP_004106874.1	KEGG: bbt:BBta_2005 hydrogenase expression/formation
YP_004106875.1	KEGG: bja:bll6932 HypA protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA
YP_004106876.1	KEGG: msl:Msil_2744 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K
YP_004106877.1	KEGG: bja:bll6930 hydrogenase maturation protein; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein
YP_004106878.1	KEGG: bja:bsl6929 hydrogenase expression/formation protein; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC)
YP_004106879.1	KEGG: bja:bll6928 HypD' protein; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein
YP_004106880.1	KEGG: bbt:BBta_2011 hydrogenase maturation; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_004106881.1	KEGG: bra:BRADO1701 two component sigma-54-dependent hydrogenase fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_004106882.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bja:bll6924 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein
YP_004106883.1	KEGG: bja:blr2350 hypothetical protein
YP_004106884.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: bbt:BBta_6730 chemotaxis response regulator protein CheB-glutamate methylesterase; SMART: response regulator receiver
YP_004106885.1	PFAM: MCP methyltransferase CheR-type; KEGG: bja:blr2348 protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type
YP_004106886.1	KEGG: bja:blr2347 putative sensory transducer protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004106887.1	KEGG: bbt:BBta_7835 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein
YP_004106888.1	KEGG: bbt:BBta_6736 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein
YP_004106889.1	KEGG: bbt:BBta_6737 chemotaxis protein CheA; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein
YP_004106890.1	KEGG: bja:blr2342 chemotaxis two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004106891.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bja:blr2341 hypothetical protein
YP_004106892.1	KEGG: bja:bll2340 two-component response regulator; PFAM: metal-dependent phosphohydrolase HD sub domain; response regulator receiver; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region
YP_004106893.1	KEGG: pla:Plav_0565 hypothetical protein
YP_004106894.1	KEGG: pla:Plav_0564 cytochrome c oxidase subunit I type; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_004106895.1	KEGG: nwi:Nwi_2313 cytochrome c oxidase, subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II
YP_004106896.1	KEGG: protein of unknown function DUF2231, transmembrane
YP_004106897.1	KEGG: pla:Plav_0562 hypothetical protein
YP_004106898.1	PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: nwi:Nwi_2311 hypothetical protein
YP_004106899.1	KEGG: nha:Nham_0500 hypothetical protein
YP_004106900.1	SMART: von Willebrand factor type A; TIGRFAM: cobalt chelatase, pCobT subunit; KEGG: bbt:BBta_7564 aerobic cobaltochelatase subunit CobT; PFAM: Cobalt chelatase CobT subunit
YP_004106901.1	PFAM: protein of unknown function DUF29; KEGG: mrd:Mrad2831_3699 hypothetical protein
YP_004106902.1	TIGRFAM: cobalt chelatase, pCobS small subunit; KEGG: oca:OCAR_4070 cobaltochelatase, CobS subunit; PFAM: ATPase associated with various cellular activities AAA_5
YP_004106903.1	PFAM: SNARE associated Golgi protein; KEGG: bja:blr0181 hypothetical protein
YP_004106904.1	KEGG: nha:Nham_0496 heat shock protein DnaJ-like; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein
YP_004106905.1	PFAM: BolA family protein; KEGG: nha:Nham_0495 BolA-like protein
YP_004106906.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bbt:BBta_7571 CBS domain-containing protein
YP_004106907.1	KEGG: bja:bll0187 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase
YP_004106908.1	KEGG: nha:Nham_0490 shikimate kinase; PFAM: shikimate kinase
YP_004106909.1	KEGG: bja:bsr0189 hypothetical protein
YP_004106910.1	KEGG: nha:Nham_0488 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein
YP_004106911.1	PFAM: transcriptional regulator PadR family protein; KEGG: acr:Acry_2218 PadR-like family transcriptional regulator
YP_004106912.1	TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; KEGG: nwi:Nwi_0392 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region
YP_004106913.1	KEGG: bra:BRADO0605 putative exported protein; putative transcriptional regulatory protein at C-terminal
YP_004106914.1	KEGG: bja:bll0204 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein
YP_004106915.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bja:blr0205 hypothetical protein
YP_004106916.1	TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: bja:bll0924 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein
YP_004106917.1	TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; KEGG: bja:blr0925 beta-ketoadipyl CoA thiolase; PFAM: Thiolase-like
YP_004106918.1	KEGG: bbt:BBta_7638 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1
YP_004106919.1	PFAM: secretion protein HlyD family protein; KEGG: bra:BRADO0542 efflux pump protein
YP_004106920.1	KEGG: bja:bll0933 transcriptional regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004106921.1	PFAM: ferric-uptake regulator; KEGG: nha:Nham_0618 ferric uptake regulator family protein
YP_004106922.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr0935 hypothetical protein
YP_004106923.1	KEGG: bja:blr0936 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein
YP_004106925.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: met:M446_1827 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein
YP_004106926.1	PFAM: BLUF domain protein; KEGG: mch:Mchl_4401 BLUF domain protein
YP_004106927.1	PFAM: Polyprenyl synthetase; KEGG: bja:bll0946 geranyltranstransferase
YP_004106928.1	KEGG: nha:Nham_0624 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51
YP_004106929.1	KEGG: bra:BRADO0557 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein
YP_004106930.1	KEGG: bbt:BBta_7618 hypothetical protein
YP_004106931.1	KEGG: nha:Nham_0627 hypothetical protein
YP_004106932.1	KEGG: bja:blr0951 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein
YP_004106933.1	KEGG: bbt:BBta_7615 putative polyhydroxyalkanoate synthesis repressor PhaR-like protein; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein
YP_004106934.1	TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bja:bll0226 acetyl-CoA acetyltransferase; PFAM: Thiolase-like
YP_004106935.1	KEGG: bja:bll0225 acetoacetyl CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR
YP_004106936.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_3690 hypothetical protein
YP_004106937.1	KEGG: bbt:BBta_7351 putative protease
YP_004106938.1	TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; KEGG: bbt:BBta_7352 ATP-dependent helicase; SMART: helicase domain protein; DEAD-like helicase
YP_004106939.1	PFAM: acyltransferase 3; KEGG: bbt:BBta_7354 hypothetical protein
YP_004106940.1	PFAM: TRAG family protein; KEGG: mes:Meso_0515 conjugal transfer coupling protein TraG
YP_004106941.1	KEGG: mes:Meso_0514 helix-turn-helix protein, CopG
YP_004106942.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3355 hypothetical protein
YP_004106943.1	manually curated; TIGRFAM: P-type conjugative transfer ATPase TrbB; KEGG: bbt:BBta_7741 conjugal transfer protein TrbB; PFAM: type II secretion system protein E
YP_004106944.1	PFAM: Conjugal transfer protein TrbC; KEGG: pzu:PHZ_c1513 conjugal transfer protein
YP_004106945.1	KEGG: bbt:BBta_1502 conjugal transfer protein TrbD
YP_004106946.1	KEGG: bbt:BBta_1503 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase
YP_004106947.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: bbt:BBta_3368 conjugal transfer protein TrbJ
YP_004106948.1	KEGG: bbt:BBta_1505 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein
YP_004106949.1	KEGG: bja:blr1618 conjugal transfer protein TrbF
YP_004106950.1	KEGG: bja:blr1619 conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX
YP_004106951.1	PFAM: conjugation TrbI family protein; KEGG: bja:blr1620 conjugal transfer protein
YP_004106952.1	PFAM: Protein of unknown function DUF2274; KEGG: bja:bsr1621 hypothetical protein
YP_004106953.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_1510 LysR family transcriptional regulator
YP_004106954.1	KEGG: mlo:mlr6385 conjugation factor synthase TraI; PFAM: autoinducer synthesis protein
YP_004106955.1	manually curated; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; KEGG: mlo:mlr6102 transcriptional regulator; SMART: regulatory protein LuxR
YP_004106956.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: cti:RALTA_B1332 FAD flavoprotein oxidoreductase
YP_004106958.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A1310 alpha-methylacyl-CoA racemase
YP_004106959.1	PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_1879 extracellular solute-binding protein
YP_004106960.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_1880 binding-protein-dependent transport systems inner membrane component
YP_004106961.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_1881 binding-protein-dependent transport systems inner membrane component
YP_004106962.1	KEGG: oca:OCAR_5301 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004106963.1	KEGG: nha:Nham_1482 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region
YP_004106964.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bgl:bglu_1g29230 AMP-binding domain protein
YP_004106965.1	PFAM: Aldehyde Dehydrogenase; KEGG: oca:OCAR_7071 succinate-semialdehyde dehydrogenase [NADP+] (ssdh)
YP_004106966.1	KEGG: pla:Plav_1965 hypothetical protein
YP_004106967.1	PFAM: FAD linked oxidase domain protein; KEGG: ret:RHE_CH00808 glycolate oxidase subunit D protein
YP_004106968.1	PFAM: FAD linked oxidase domain protein; KEGG: mno:Mnod_0677 FAD linked oxidase domain protein
YP_004106969.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mno:Mnod_0680 protein of unknown function DUF224 cysteine-rich region domain protein
YP_004106970.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: rme:Rmet_4580 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; SMART: AAA ATPase
YP_004106971.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: reh:H16_B0717 ABC transporter ATPase; SMART: AAA ATPase
YP_004106972.1	PFAM: extracellular solute-binding protein family 5; KEGG: rme:Rmet_4578 extracellular solute-binding protein
YP_004106973.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B0719 ABC transporter permease
YP_004106974.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B0720 ABC transporter permease
YP_004106975.1	PFAM: FAD linked oxidase domain protein; KEGG: pol:Bpro_5107 FAD linked oxidase-like
YP_004106976.1	PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_2266 glutathione S-transferase domain-containing protein
YP_004106977.1	KEGG: bbr:BB0279 ferredoxin; manually curated; PFAM: Rieske [2Fe-2S] iron-sulphur domain
YP_004106978.1	PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; Rieske [2Fe-2S] iron-sulphur domain; KEGG: nar:Saro_1680 ring hydroxylating dioxygenase, alpha subunit
YP_004106979.1	PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: nar:Saro_1681 aromatic-ring-hydroxylating dioxygenase, beta subunit
YP_004106980.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mlo:mll9218 putative ferredoxin reductase
YP_004106981.1	manually curated; KEGG: dol:Dole_2089 hypothetical protein
YP_004106982.1	KEGG: dol:Dole_2090 hypothetical protein
YP_004106983.1	KEGG: cyc:PCC7424_5594 patatin; manually curated; PFAM: Patatin
YP_004106984.1	KEGG: cak:Caul_1158 hypothetical protein
YP_004106985.1	manually curated; PFAM: helix-turn-helix domain protein; KEGG: bac:BamMC406_6747 XRE family transcriptional regulator; SMART: helix-turn-helix domain protein
YP_004106986.1	PFAM: protein of unknown function DUF955; KEGG: xau:Xaut_0551 hypothetical protein
YP_004106987.1	PFAM: integrase family protein; KEGG: mlo:mll6432 symbiosis island integrase
YP_004106988.1	KEGG: nha:Nham_3497 disulphide bond formation protein DsbB
YP_004106989.1	KEGG: bja:bll6988 hypothetical protein; PFAM: histidine kinase dimerisation/phosphoacceptor; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein
YP_004106990.1	KEGG: mlo:mll9592 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004106991.1	PFAM: PRC-barrel domain protein; KEGG: mlo:mlr9581 hypothetical protein
YP_004106992.1	KEGG: bja:bll1341 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase
YP_004106993.1	KEGG: bra:BRADO6543 putative signal peptide
YP_004106994.1	PFAM: LrgA family protein; KEGG: bja:blr1347 hypothetical protein
YP_004106995.1	PFAM: LrgB family protein; KEGG: bja:blr1348 hypothetical protein
YP_004106996.1	KEGG: mrd:Mrad2831_1254 hypothetical protein
YP_004106997.1	KEGG: bja:bll1350 hypothetical protein
YP_004106998.1	PFAM: protein of unknown function UPF0118; KEGG: bbt:BBta_2998 hypothetical protein
YP_004106999.1	TIGRFAM: anti-sigma factor, , ChrR family; KEGG: avi:Avi_0090 anti sigma factor protein
YP_004107000.1	KEGG: rru:Rru_A0722 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004107002.1	PFAM: Methyltransferase type 12; KEGG: mno:Mnod_2730 methyltransferase type 12
YP_004107003.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mrd:Mrad2831_3013 LysR family transcriptional regulator
YP_004107004.1	PFAM: sodium:dicarboxylate symporter; KEGG: mrd:Mrad2831_3012 C4-dicarboxylate transporter DctA
YP_004107005.1	KEGG: mrd:Mrad2831_3011 hypothetical protein; TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein
YP_004107006.1	KEGG: mrd:Mrad2831_3010 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase
YP_004107007.1	PFAM: Methyltransferase type 11; KEGG: dac:Daci_2653 methyltransferase type 11
YP_004107008.1	KEGG: bja:bll1367 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease
YP_004107009.1	KEGG: bja:bll4682 cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_004107010.1	TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: bja:bll0812 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase
YP_004107011.1	PFAM: Pirin domain protein; KEGG: bja:bll0813 hypothetical protein
YP_004107012.1	KEGG: oca:OCAR_4530 malonyl-CoA decarboxylase; PFAM: Malonyl-CoA decarboxylase
YP_004107013.1	PFAM: PAS fold-4 domain protein; KEGG: sma:SAV_698 magnesium or manganese-dependent protein phosphatase
YP_004107014.1	PFAM: MmgE/PrpD family protein; KEGG: bja:bll0816 hypothetical protein
YP_004107015.1	KEGG: bbt:BBta_0015 hypothetical protein
YP_004107016.1	KEGG: alv:Alvin_1734 protein of unknown function DUF2269, transmembrane
YP_004107017.1	TIGRFAM: esterase, PHB depolymerase family; KEGG: bja:blr0899 poly(3-hydroxyalkanoate) depolymerase
YP_004107018.1	PFAM: protein of unknown function DUF1236; KEGG: nha:Nham_0234 hypothetical protein
YP_004107019.1	KEGG: bja:blr7666 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004107020.1	KEGG: bbt:BBta_7673 metallo-hydrolase/oxidoreductase domain-containing protein
YP_004107021.1	SMART: von Willebrand factor type A; KEGG: hch:HCH_00942 von Willebrand factor type A domain-containing protein
YP_004107022.1	KEGG: nha:Nham_0232 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1052
YP_004107023.1	KEGG: bja:bll0904 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004107024.1	KEGG: nwi:Nwi_0110 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004107025.1	KEGG: bja:blr0906 nodulation ATP-binding protein I; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107026.1	PFAM: ABC-2 type transporter; KEGG: bja:blr0907 hypothetical protein
YP_004107027.1	KEGG: bja:blr0908 hypothetical protein; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein
YP_004107028.1	KEGG: bja:blr0909 hypothetical protein; manually curated; PFAM: protein of unknown function DUF45
YP_004107029.1	KEGG: nha:Nham_0227 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_004107030.1	KEGG: bra:BRADO5555 hypothetical protein
YP_004107031.1	KEGG: afu:AF2218 hypothetical protein
YP_004107032.1	PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_7651 putative branched-chain amino acid ABC transporter, periplasmic binding protein
YP_004107033.1	PFAM: protein of unknown function DUF1304; KEGG: bbt:BBta_7649 hypothetical protein
YP_004107034.1	KEGG: bja:blr0911 hypothetical protein
YP_004107035.1	KEGG: bra:BRADO3478 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver
YP_004107036.1	KEGG: bra:BRADO0672 transcriptional accessory protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold
YP_004107037.1	KEGG: nha:Nham_1938 chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter
YP_004107038.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: alv:Alvin_1021 short-chain dehydrogenase/reductase SDR
YP_004107039.1	PFAM: regulatory protein TetR; KEGG: ctt:CtCNB1_4790 transcriptional regulator, TetR family
YP_004107040.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rfr:Rfer_0523 acyl-CoA dehydrogenase-like
YP_004107041.1	TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: afr:AFE_0524 carboxy-terminal peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein
YP_004107042.1	SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: bja:bll0916 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein
YP_004107043.1	TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: bbt:BBta_7590 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ
YP_004107044.1	PFAM: NUDIX hydrolase; KEGG: bbt:BBta_7592 putative mutator protein MutT
YP_004107045.1	PFAM: Methyltransferase type 11; KEGG: bja:bll0208 methyltransferase
YP_004107046.1	KEGG: bbt:BBta_7253 hypothetical protein
YP_004107047.1	PFAM: phosphoribosyltransferase; KEGG: nha:Nham_0480 phosphoribosyltransferase
YP_004107048.1	KEGG: bra:BRADO0582 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin
YP_004107049.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bbt:BBta_7596 putative nitrilase
YP_004107050.1	PFAM: protein of unknown function DUF1178; KEGG: bja:blr0212 hypothetical protein
YP_004107051.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_0476 hypothetical protein
YP_004107052.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_0475 hypothetical protein
YP_004107053.1	KEGG: bra:BRADO0882 putative metal-dependent hydrolase
YP_004107054.1	TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: bra:BRADO0576 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11
YP_004107055.1	KEGG: bra:BRADO0574 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein
YP_004107056.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; GAF domain protein; PEP-utilising protein mobile region; KEGG: bja:blr0217 phosphoenolpyruvate-protein phosphotransferase; SMART: GAF domain protein
YP_004107057.1	KEGG: bbt:BBta_7604 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein
YP_004107058.1	manually curated; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; KEGG: nha:Nham_0469 HemK family modification methylase; PFAM: methyltransferase small
YP_004107059.1	KEGG: nha:Nham_0468 hypothetical protein
YP_004107060.1	PFAM: Methyltransferase type 11; KEGG: oca:OCAR_4101 methyltransferase type 11
YP_004107061.1	TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: nha:Nham_0466 hydroxyacylglutathione hydrolase
YP_004107062.1	PFAM: protein of unknown function DUF985; KEGG: xau:Xaut_2020 hypothetical protein
YP_004107063.1	PFAM: PfkB domain protein; KEGG: nha:Nham_0460 PfkB
YP_004107064.1	KEGG: bja:blr8123 MutT/NUDIX family protein; PFAM: NUDIX hydrolase; Zinc ribbon NADH pyrophosphatase; NADH pyrophosphatase-like
YP_004107065.1	PFAM: histidine triad (HIT) protein; KEGG: bbt:BBta_7347 hypothetical protein
YP_004107066.1	TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: bja:bll8116 DNA polymerase III subunits gamma and tau; SMART: AAA ATPase
YP_004107067.1	PFAM: conserved hypothetical protein; KEGG: nha:Nham_0463 hypothetical protein
YP_004107068.1	TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain protein; KEGG: oca:OCAR_7543 recombination protein RecR; SMART: Toprim sub domain protein
YP_004107069.1	KEGG: bja:bll8113 hypothetical protein
YP_004107070.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr8112 hypothetical protein
YP_004107071.1	PFAM: protein of unknown function DUF195; KEGG: bja:blr8110 hypothetical protein
YP_004107072.1	TIGRFAM: peptide deformylase; KEGG: bja:bll8109 peptide deformylase; PFAM: formylmethionine deformylase
YP_004107073.1	KEGG: nha:Nham_3694 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein
YP_004107074.1	TIGRFAM: tRNA pseudouridine synthase A; KEGG: bra:BRADO0772 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain
YP_004107075.1	KEGG: nwi:Nwi_3068 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_004107076.1	TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: nha:Nham_3698 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
YP_004107077.1	KEGG: nha:Nham_3699 pyrimidine 5-nucleotidase; TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004107078.1	KEGG: bja:blr8102 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1036; Peptidoglycan-binding domain 1 protein
YP_004107079.1	TIGRFAM: acetylglutamate kinase; KEGG: bra:BRADO0779 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase
YP_004107080.1	PFAM: protein of unknown function DUF423; KEGG: bbt:BBta_7328 hypothetical protein
YP_004107081.1	KEGG: bra:BRADO0781 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related
YP_004107082.1	KEGG: bja:blr8098 putative inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60 kDa inner membrane insertion protein
YP_004107083.1	KEGG: nha:Nham_3704 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein
YP_004107084.1	KEGG: nha:Nham_3706 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_004107085.1	PFAM: pentapeptide repeat protein; KEGG: tel:tll0709 hypothetical protein
YP_004107087.1	KEGG: cps:CPS_1517 flagellar biosynthesis regulator FlhF
YP_004107088.1	PFAM: glutamine amidotransferase class-I; KEGG: pde:Pden_1435 glutamine amidotransferase class-I
YP_004107089.1	PFAM: protein of unknown function DUF1234; KEGG: rlg:Rleg_4455 protein of unknown function DUF1234
YP_004107090.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: azc:AZC_2068 efflux protein
YP_004107091.1	KEGG: zmo:ZMO1944 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH
YP_004107092.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rsp:RSP_1915 LysR family transcriptional regulator
YP_004107093.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: rsh:Rsph17029_0568 cupin 2 domain-containing protein
YP_004107094.1	PFAM: protein of unknown function DUF1330; KEGG: rce:RC1_4047 hypothetical protein
YP_004107095.1	PFAM: protein of unknown function DUF1486; KEGG: pde:Pden_1443 hypothetical protein
YP_004107096.1	PFAM: thioesterase superfamily protein; KEGG: rce:RC1_4046 thioesterase family protein
YP_004107097.1	KEGG: acp:A2cp1_2977 glutamate synthase (NADPH), homotetrameric; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain
YP_004107098.1	KEGG: bja:blr7973 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004107099.1	PFAM: regulatory protein TetR; KEGG: fre:Franean1_3028 TetR family transcriptional regulator
YP_004107100.1	PFAM: secretion protein HlyD family protein; KEGG: mpo:Mpop_0535 secretion protein HlyD family protein
YP_004107101.1	KEGG: mpo:Mpop_0536 ABC transporter related; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase
YP_004107102.1	PFAM: ABC-2 type transporter; KEGG: sil:SPO0109 hypothetical protein
YP_004107103.1	KEGG: bja:blr4505 hypothetical protein
YP_004107104.1	KEGG: bra:BRADO3583 hypothetical protein
YP_004107105.1	KEGG: bja:blr5288 transcriptional regulatory protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR
YP_004107106.1	PFAM: conserved hypothetical protein; KEGG: bja:blr5289 hypothetical protein
YP_004107107.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bja:blr1229 hypothetical protein
YP_004107108.1	KEGG: bbt:BBta_5841 putative ATP-binding component, PhnN protein; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region
YP_004107109.1	KEGG: bja:blr1227 phosphonate metabolism protein; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase
YP_004107110.1	TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: bja:blr1226 phosphonate uptake transporter ATP-binding protein; SMART: AAA ATPase
YP_004107111.1	TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bbt:BBta_5844 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase
YP_004107112.1	PFAM: phosphonate metabolism PhnJ; KEGG: bbt:BBta_5845 putative PhnJ protein, phosphonate metabolism
YP_004107113.1	PFAM: phosphonate metabolism; KEGG: bja:blr1223 phosphonate metabolism protein
YP_004107114.1	KEGG: bja:blr1222 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism
YP_004107115.1	KEGG: bja:blr1221 phosphonate metabolism protein; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG
YP_004107116.1	TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: bbt:BBta_5849 GntR family transcriptional regulator; SMART: regulatory protein GntR HTH
YP_004107117.1	KEGG: bra:BRADO5363 putative PhnE protein, phosphonate ABC transporter, putative membrane protein; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004107118.1	KEGG: xau:Xaut_1320 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004107119.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: xau:Xaut_1321 phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_004107120.1	TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bja:bll7947 phosphonates transport system nucleotide binding/ATPase protein; SMART: AAA ATPase
YP_004107121.1	TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: bbt:BBta_5859 putative acetyltransferase
YP_004107122.1	KEGG: bja:blr7949 phosphonate metabolism protein; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase
YP_004107123.1	KEGG: bja:blr7950 hypothetical protein; TIGRFAM: phosphonate metabolism protein; PFAM: protein of unknown function DUF1045
YP_004107124.1	KEGG: mpt:Mpe_A3544 hypothetical protein
YP_004107126.1	PFAM: protein of unknown function DUF123; KEGG: rru:Rru_A0067 hypothetical protein
YP_004107127.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: oca:OCAR_6913 CutA1 divalent ion tolerance protein
YP_004107128.1	KEGG: aba:Acid345_1009 hypothetical protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB
YP_004107129.1	KEGG: ank:AnaeK_2200 hypothetical protein
YP_004107130.1	PFAM: PEBP family protein; KEGG: pph:Ppha_1458 PEBP family protein
YP_004107131.1	TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; KEGG: bbt:BBta_3155 cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase
YP_004107132.1	TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_004107133.1	PFAM: protein of unknown function DUF1636; KEGG: mrd:Mrad2831_3113 hypothetical protein
YP_004107134.1	KEGG: mag:amb4425 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein
YP_004107135.1	KEGG: mno:Mnod_2148 cobalamin biosynthesis protein CobW; TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein
YP_004107136.1	TIGRFAM: cobaltochelatase, CobN subunit; KEGG: mag:amb4427 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase
YP_004107137.1	TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: rlt:Rleg2_2130 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
YP_004107138.1	KEGG: rsq:Rsph17025_0384 cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase
YP_004107139.1	KEGG: sme:SMc04279 cobalamin biosynthesis protein; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB
YP_004107140.1	PFAM: periplasmic binding protein; KEGG: nha:Nham_3728 periplasmic binding protein
YP_004107141.1	KEGG: rce:RC1_3874 threonine-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II
YP_004107142.1	KEGG: nwi:Nwi_3049 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107143.1	PFAM: transport system permease protein; KEGG: nha:Nham_3730 transport system permease protein
YP_004107144.1	KEGG: bmj:BMULJ_01659 high-affinity nickel-transport protein; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter
YP_004107145.1	PFAM: Methyltransferase type 12; KEGG: mlo:mlr1575 hypothetical protein
YP_004107146.1	KEGG: bid:Bind_3049 hypothetical protein
YP_004107147.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_3092 LysR family transcriptional regulator
YP_004107148.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bja:bll3138 formate dehydrogenase subunit gamma
YP_004107149.1	KEGG: bja:bll3137 NADH dehydrogenase I chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
YP_004107150.1	KEGG: bja:bll3136 formate dehydrogenase alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region
YP_004107151.1	KEGG: bbt:BBta_3088 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD
YP_004107152.1	KEGG: bja:bsl3134 putative NAD-dependent formate dehydrogenase
YP_004107153.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2314 MFS permease
YP_004107154.1	KEGG: bja:bll0591 hypothetical protein
YP_004107155.1	PFAM: cytochrome c class I; KEGG: bbt:BBta_0312 putative cytochrome c4 precursor
YP_004107156.1	KEGG: rru:Rru_A1356 catalase; PFAM: Catalase related subgroup; Catalase domain protein
YP_004107157.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: dal:Dalk_4842 acyl-CoA dehydrogenase domain protein
YP_004107158.1	KEGG: bja:blr6138 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase
YP_004107159.1	PFAM: VWA containing CoxE family protein; KEGG: bja:blr6139 hypothetical protein
YP_004107160.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0667 putative O-succinylbenzoate--CoA ligase
YP_004107161.1	KEGG: rso:RSc2290 iron oxidase precursor oxidoreductase protein
YP_004107162.1	TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family; KEGG: gem:GM21_0398 hypothetical protein
YP_004107163.1	TIGRFAM: decaheme c-type cytochrome, DmsE family; cytochrome C family protein; KEGG: nhl:Nhal_1192 cytochrome c family protein
YP_004107164.1	TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: oca:OCAR_7383 sulfate/thiosulfate import ATP-binding protein CysA; SMART: AAA ATPase
YP_004107165.1	KEGG: nwi:Nwi_2758 sulfate ABC transporter, permease protein CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004107166.1	KEGG: nha:Nham_3559 sulfate ABC transporter, permease protein CysT; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004107167.1	KEGG: oca:OCAR_7386 thiosulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1
YP_004107168.1	PFAM: phosphoadenosine phosphosulfate reductase; KEGG: nha:Nham_3561 phosphoadenosine phosphosulfate reductase
YP_004107169.1	PFAM: phosphoadenosine phosphosulfate reductase; KEGG: bbt:BBta_6983 sulfate adenylyltransferase subunit 2
YP_004107170.1	TIGRFAM: sulfate adenylyltransferase, large subunit; adenylylsulfate kinase; KEGG: nwi:Nwi_2764 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein
YP_004107171.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bja:bll7916 ABC transporter ATP-binding protein; SMART: AAA ATPase
YP_004107172.1	PFAM: Amidase; KEGG: bja:bll7917 putative glutamyl-tRNA(Gln) amidotransferase
YP_004107173.1	KEGG: bbt:BBta_7146 hypothetical protein
YP_004107174.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bja:bll7918 ABC transporter ATP-binding protein; SMART: AAA ATPase
YP_004107175.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1552 ABC transporter permease protein
YP_004107176.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7920 ABC transporter permease protein
YP_004107177.1	PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_7150 putative oligopeptide ABC transporter (substrate binding protein)
YP_004107178.1	PFAM: extracellular solute-binding protein family 5; KEGG: bja:blr7922 ABC transporter substrate-binding protein
YP_004107179.1	KEGG: sil:SPO0636 EF hand domain-containing protein
YP_004107180.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE1205 TonB-dependent receptor protein
YP_004107181.1	KEGG: mdi:METDI0368 putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp
YP_004107182.1	KEGG: rsq:Rsph17025_3536 hypothetical protein
YP_004107183.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: met:M446_6787 diguanylate cyclase/phosphodiesterase; SMART: GGDEF domain containing protein
YP_004107184.1	KEGG: cvi:CV_2285 hypothetical protein
YP_004107185.1	KEGG: sfu:Sfum_1197 hypothetical protein
YP_004107186.1	KEGG: rcu:RCOM_1905080 hypothetical protein
YP_004107187.1	KEGG: reh:PHG265 transmembrane nitrate/nitrite sensor kinase
YP_004107188.1	manually curated; KEGG: pth:PTH_0722 hypothetical protein
YP_004107189.1	KEGG: pth:PTH_0723 hypothetical protein; manually curated; PFAM: stem cell self-renewal protein Piwi domain protein
YP_004107190.1	KEGG: oca:OCAR_4017 hypothetical protein
YP_004107191.1	KEGG: bac:BamMC406_2103 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004107192.1	PFAM: protein of unknown function DUF736; KEGG: oca:OCAR_4014 hypothetical protein
YP_004107193.1	KEGG: mea:Mex_2p0350 hypothetical protein
YP_004107194.1	KEGG: swi:Swit_3678 hypothetical protein
YP_004107195.1	KEGG: mes:Meso_2340 hypothetical protein
YP_004107196.1	KEGG: oca:OCAR_4011 hypothetical protein
YP_004107197.1	KEGG: mes:Meso_2328 hypothetical protein
YP_004107198.1	KEGG: bbt:BBta_1485 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004107199.1	KEGG: oca:OCAR_4009 phage transcriptional regulator, AlpA
YP_004107200.1	PFAM: Replication initiator protein A; KEGG: oca:OCAR_4008 replication protein A
YP_004107201.1	KEGG: oca:OCAR_4005 hypothetical protein
YP_004107202.1	KEGG: zmn:Za10_1345 TraF peptidase. serine peptidase MEROPS family S26C; TIGRFAM: conjugative transfer signal peptidase TraF; PFAM: Peptidase S26, conserved region
YP_004107203.1	PFAM: protein of unknown function DUF736; KEGG: zmn:Za10_1346 protein of unknown function DUF736
YP_004107204.1	PFAM: Lytic transglycosylase catalytic; KEGG: oca:OCAR_4002 lytic transglycosylase, catalytic
YP_004107205.1	KEGG: zmn:Za10_1349 hypothetical protein
YP_004107206.1	KEGG: mno:Mnod_0480 hypothetical protein
YP_004107207.1	PFAM: regulatory protein TetR; KEGG: adg:Adeg_1061 transcriptional regulator, TetR family
YP_004107208.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: oca:OCAR_7611 transcriptional regulator, LysR family
YP_004107209.1	PFAM: TRAG family protein; KEGG: oca:OCAR_7610 conjugal transfer coupling protein TraG
YP_004107210.1	KEGG: zmn:Za10_1355 CopG domain protein DNA-binding domain protein
YP_004107211.1	manually curated; TIGRFAM: P-type conjugative transfer ATPase TrbB; KEGG: oca:OCAR_7608 P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E
YP_004107212.1	PFAM: Conjugal transfer protein TrbC; KEGG: pla:Plav_3542 conjugal transfer protein TrbC
YP_004107213.1	KEGG: oca:OCAR_7606 conjugal transfer protein TrbB
YP_004107214.1	KEGG: oca:OCAR_7605 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase
YP_004107215.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: oca:OCAR_7604 conjugal transfer protein TrbJ
YP_004107216.1	KEGG: mes:Meso_2319 hypothetical protein
YP_004107217.1	KEGG: oca:OCAR_4186 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein
YP_004107218.1	KEGG: oca:OCAR_7601 conjugal transfer protein TrbF
YP_004107219.1	KEGG: oca:OCAR_7600 conjugal transfer protein TrbG/VirB9/CagX; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX
YP_004107220.1	PFAM: conjugation TrbI family protein; KEGG: mes:Meso_0500 conjugation TrbI-like protein
YP_004107221.1	PFAM: Protein of unknown function DUF2274; KEGG: mpo:Mpop_3096 hypothetical protein
YP_004107222.1	manually curated; KEGG: hne:HNE_1724 hypothetical protein
YP_004107223.1	KEGG: bid:Bind_3765 helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_004107224.1	KEGG: swi:Swit_3385 hypothetical protein
YP_004107225.1	KEGG: app:CAP2UW1_4477 hypothetical protein
YP_004107226.1	KEGG: sme:SMa2167 hypothetical protein
YP_004107227.1	PFAM: Resolvase domain; Recombinase; KEGG: swi:Swit_3384 resolvase domain-containing protein
YP_004107228.1	PFAM: integrase family protein; KEGG: bbt:BBta_7820 putative phage integrase
YP_004107229.1	KEGG: sjp:SJA_C1-03600 putative helicase; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase
YP_004107230.1	KEGG: sjp:SJA_C1-03610 hypothetical protein
YP_004107231.1	KEGG: gox:GOX1507 putative restriction endonuclease
YP_004107232.1	KEGG: pde:Pden_1524 putative chromosome segregation SMC protein
YP_004107233.1	KEGG: pde:Pden_1525 hypothetical protein
YP_004107234.1	KEGG: gox:GOX1504 ATP-dependent helicase HepA; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase
YP_004107235.1	KEGG: gox:GOX1503 ATP-dependent helicase Lhr; PFAM: Protein of unknown function DUF1998; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_004107236.1	PFAM: Domain of unknown function DUF1814; KEGG: smd:Smed_5454 hypothetical protein
YP_004107237.1	KEGG: smd:Smed_5453 hypothetical protein
YP_004107238.1	PFAM: domain of unknown function DUF1738; KEGG: bbt:BBta_7394 putative ArdC antirestriction protein
YP_004107239.1	KEGG: nwi:Nwi_2122 hypothetical protein
YP_004107240.1	KEGG: bja:bll0065 putative DNA-binding protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease
YP_004107241.1	KEGG: gdj:Gdia_2785 hypothetical protein
YP_004107242.1	PFAM: Protein of unknown function DUF2493; KEGG: mes:Meso_0533 hypothetical protein
YP_004107243.1	KEGG: mlo:msl1988 hypothetical protein
YP_004107244.1	KEGG: mes:Meso_4060 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004107245.1	PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mkm:Mkms_3597 activator of HSP90 ATPase 1 family protein
YP_004107246.1	PFAM: bifunctional deaminase-reductase domain protein; KEGG: ara:Arad_9899 bifunctional deaminase-reductase, C-terminal
YP_004107247.1	PFAM: regulatory protein TetR; KEGG: ara:Arad_9898 hypothetical protein
YP_004107248.1	KEGG: xau:Xaut_2861 hypothetical protein
YP_004107249.1	PFAM: protein of unknown function DUF736; KEGG: nwi:Nwi_2134 hypothetical protein
YP_004107250.1	KEGG: gdj:Gdia_2792 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004107251.1	KEGG: cak:Caul_3813 hypothetical protein
YP_004107252.1	KEGG: cak:Caul_3814 hypothetical protein
YP_004107253.1	KEGG: pla:Plav_3529 hypothetical protein
YP_004107254.1	KEGG: cak:Caul_3816 putative transcriptional regulator
YP_004107255.1	KEGG: azc:AZC_3834 replication protein A; manually curated; PFAM: Replication initiator protein A
YP_004107256.1	KEGG: cak:Caul_3818 cobyrinic acid ac-diamide synthase
YP_004107257.1	KEGG: mpo:Mpop_3078 hypothetical protein
YP_004107258.1	KEGG: oca:OCAR_4200 hypothetical protein
YP_004107259.1	PFAM: Peptidase S26, conserved region; KEGG: xau:Xaut_4011 peptidase S26C conjugative transfer signal peptidase TraF
YP_004107260.1	PFAM: protein of unknown function DUF736; KEGG: pde:Pden_1509 hypothetical protein
YP_004107261.1	PFAM: Lytic transglycosylase catalytic; KEGG: oca:OCAR_4197 lytic transglycosylase, catalytic
YP_004107262.1	KEGG: oca:OCAR_4196 type IV secretory pathway VirD2 components
YP_004107263.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mlo:mll7611 serine/threonine dehydratase
YP_004107264.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: hmo:HM1_0326 conserved hypothetical protein, putative cupin domain protein
YP_004107265.1	SMART: regulatory protein ArsR; KEGG: mlo:mll3509 hypothetical protein
YP_004107266.1	KEGG: nfa:nfa16520 hypothetical protein
YP_004107267.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmj:BMULJ_04885 glyoxalase/bleomycin resistance protein
YP_004107268.1	PFAM: major facilitator superfamily MFS_1; KEGG: cyn:Cyan7425_0013 major facilitator superfamily MFS_1
YP_004107269.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pag:PLES_30461 transcriptional regulator PtxR
YP_004107270.1	PFAM: TRAG family protein; KEGG: xau:Xaut_2876 conjugal transfer coupling protein TraG
YP_004107271.1	KEGG: oca:OCAR_4194 helix-turn-helix protein of CopG family
YP_004107272.1	PFAM: aminotransferase class V; KEGG: scl:sce8911 class-V aminotransferase
YP_004107273.1	PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: gym:GYMC10_3404 epoxide hydrolase domain protein
YP_004107275.1	PFAM: TrkA-N domain protein; KEGG: vap:Vapar_5657 NmrA family protein
YP_004107276.1	KEGG: cvi:CV_2335 DeoR family transcriptional regulator
YP_004107277.1	KEGG: xau:Xaut_3004 P-type conjugative transfer ATPase TrbB; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E
YP_004107278.1	PFAM: Conjugal transfer protein TrbC; KEGG: mes:Meso_0508 conjugal transfer protein TrbC
YP_004107279.1	KEGG: sjp:SJA_C1-19970 type IV secretory pathway TrbD component
YP_004107280.1	SMART: AAA ATPase; KEGG: sjp:SJA_C1-19960 type IV secretory pathway VirB4 component
YP_004107281.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: mes:Meso_0505 conjugal transfer protein TrbJ
YP_004107282.1	KEGG: pde:Pden_1479 hypothetical protein
YP_004107283.1	KEGG: xau:Xaut_2884 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein
YP_004107284.1	KEGG: oan:Oant_3219 conjugal transfer protein TrbF
YP_004107285.1	KEGG: oca:OCAR_4184 conjugal transfer protein TrbG/VirB9/CagX; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX
YP_004107286.1	PFAM: conjugation TrbI family protein; KEGG: mes:Meso_0500 conjugation TrbI-like protein
YP_004107287.1	KEGG: bja:bsl8278 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2274
YP_004107288.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mes:Meso_3862 LysR family transcriptional regulator
YP_004107289.1	PFAM: regulatory protein MarR; KEGG: pde:Pden_4527 MarR family transcriptional regulator
YP_004107290.1	PFAM: Methyltransferase type 11; KEGG: pde:Pden_4526 methyltransferase type 11
YP_004107291.1	manually curated; KEGG: sna:Snas_3802 hypothetical protein
YP_004107292.1	PFAM: alpha/beta hydrolase fold; KEGG: rde:RD1_2829 haloacetate dehalogenase H-1, putative
YP_004107293.1	PFAM: Camphor resistance CrcB protein; KEGG: gbe:GbCGDNIH1_1541 CrcB family protein
YP_004107294.1	PFAM: beta-lactamase; KEGG: smt:Smal_2573 beta-lactamase
YP_004107295.1	PFAM: protein of unknown function DUF307; KEGG: bja:blr2954 hypothetical protein
YP_004107296.1	KEGG: bja:bsr4225 hypothetical protein
YP_004107297.1	KEGG: bja:bll2229 ACY1 bifunctional acylase; PFAM: gamma-glutamyltranspeptidase
YP_004107298.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bja:blr4813 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein
YP_004107299.1	KEGG: saj:SaurJH9_0901 phage-related protein-like protein
YP_004107300.1	KEGG: bra:BRADO7011 hypothetical protein
YP_004107301.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: xau:Xaut_4077 acyl-CoA dehydrogenase domain-containing protein
YP_004107302.1	KEGG: bra:BRADO0362 putative cytochrome c precursor (cytochrome c552)(CycB)
YP_004107303.1	KEGG: bja:blr0497 hypothetical protein
YP_004107304.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: nha:Nham_3276 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein
YP_004107305.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr0893 putative oxidoreductase
YP_004107306.1	PFAM: cytochrome P450; KEGG: bbt:BBta_7679 putative cytochrome P450 family protein
YP_004107307.1	KEGG: bja:blr4264 putative adenylate cyclase protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase
YP_004107308.1	PFAM: peptidase M48 Ste24p; KEGG: bja:blr2450 heat shock protein HtpX
YP_004107309.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr0898 ATP-binding protein
YP_004107310.1	PFAM: aminotransferase class V; KEGG: bbt:BBta_0544 putative aminotransferase, class V
YP_004107311.1	KEGG: mlo:mlr2577 hypothetical protein
YP_004107312.1	KEGG: bbt:BBta_0545 putative nuclease-like protein; PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein)
YP_004107313.1	KEGG: nha:Nham_3607 hypothetical protein
YP_004107314.1	PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bra:BRADO6982 putative peptidase; caspase-like
YP_004107315.1	KEGG: bja:bll1137 carbonic anhydrase; PFAM: carbonic anhydrase
YP_004107316.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: nha:Nham_0557 putative phage repressor
YP_004107317.1	PFAM: protein of unknown function DUF952; KEGG: nha:Nham_0556 hypothetical protein
YP_004107318.1	TIGRFAM: dihydroorotate dehydrogenase; KEGG: bja:blr1140 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase
YP_004107319.1	KEGG: bja:bll1142 hypothetical protein
YP_004107320.1	PFAM: carbonic anhydrase; KEGG: msl:Msil_2753 carbonic anhydrase
YP_004107321.1	KEGG: bja:bll1141 DNA-damage-inducible protein F; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE
YP_004107322.1	KEGG: nwi:Nwi_0463 hypothetical protein
YP_004107323.1	PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: bja:bll1144 ATP-dependent DNA ligase
YP_004107324.1	KEGG: bbt:BBta_0799 putative metallo-hydrolase/oxidoreductase
YP_004107325.1	PFAM: porin; KEGG: nha:Nham_0239 putative outer membrane protein
YP_004107326.1	PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_0801 putative amino-acid ABC transport system, periplasmic binding protein
YP_004107327.1	manually curated; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: bbt:BBta_0802 putative ATP dependent DNA helicase; SMART: DEAD-like helicase ; helicase domain protein
YP_004107328.1	KEGG: nha:Nham_0241 metallophosphoesterase
YP_004107329.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:bll1150 transcriptional regulatory protein
YP_004107330.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_0243 hypothetical protein
YP_004107331.1	KEGG: bja:bll8038 putative manganese transport protein
YP_004107332.1	PFAM: hypothetical protein; KEGG: bra:BRADO6731 hypothetical protein
YP_004107333.1	PFAM: protein of unknown function DUF81; KEGG: bja:bll1154 hypothetical protein
YP_004107334.1	KEGG: bja:bll1155 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein
YP_004107335.1	PFAM: regulatory protein TetR; KEGG: bja:blr0601 transcriptional regulatory protein
YP_004107336.1	KEGG: bbt:BBta_0814 hypothetical protein
YP_004107337.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1158 acyl-CoA dehydrogenase
YP_004107338.1	TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bra:BRADO6724 acetyl-CoA acetyltransferase; PFAM: Thiolase-like
YP_004107339.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_0817 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase
YP_004107340.1	PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_0818 glutathione S-transferase
YP_004107341.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dsh:Dshi_2523 putative hydrogen peroxide-inducible genes activator
YP_004107342.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: alv:Alvin_1006 peroxiredoxin
YP_004107343.1	PFAM: Ferritin Dps family protein; KEGG: pzu:PHZ_p0100 DNA-binding ferritin-like protein (oxidative damage protectant)
YP_004107344.1	KEGG: mch:Mchl_4146 beta-lactamase domain protein
YP_004107345.1	KEGG: bra:BRADO6719 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004107346.1	TIGRFAM: glutamate/cysteine ligase; KEGG: bja:blr1164 putative glutathione synthetase; PFAM: glutamate--cysteine ligase GCS2
YP_004107347.1	SMART: Apple; KEGG: bja:blr1165 hypothetical protein
YP_004107348.1	TIGRFAM: signal peptidase I; KEGG: nha:Nham_0252 peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region
YP_004107349.1	PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bbt:BBta_0825 putative peptidase TldD
YP_004107350.1	PFAM: protein of unknown function DUF433; KEGG: ana:asr2958 hypothetical protein
YP_004107352.1	KEGG: rso:RS02614 putative transcription regulator protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004107353.1	KEGG: pmy:Pmen_2630 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein
YP_004107354.1	PFAM: Invasion associated locus B family protein; KEGG: nwi:Nwi_0222 invasion associated locus B
YP_004107355.1	KEGG: bja:blr1170 cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region
YP_004107356.1	KEGG: bra:BRADO6706 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I
YP_004107357.1	KEGG: bja:blr1172 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase
YP_004107358.1	KEGG: oca:OCAR_4688 hypothetical protein
YP_004107359.1	PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: nha:Nham_3459 cytochrome c oxidase assembly protein
YP_004107360.1	PFAM: cytochrome c oxidase subunit III; KEGG: bbt:BBta_0833 cytochrome c oxidase, subunit III
YP_004107361.1	PFAM: protein of unknown function DUF983; KEGG: bja:blr1176 hypothetical protein
YP_004107362.1	PFAM: Surfeit locus 1 family protein; KEGG: oca:OCAR_4692 surfeit locus 1 family protein
YP_004107363.1	PFAM: protein of unknown function UPF0150; KEGG: rrs:RoseRS_1435 hypothetical protein
YP_004107364.1	PFAM: YcfA family protein; KEGG: mta:Moth_0298 YcfA-like
YP_004107365.1	TIGRFAM: threonine synthase; KEGG: nha:Nham_0262 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_004107366.1	KEGG: bja:blr1182 mitochondrial processing peptidase-like protein; PFAM: peptidase M16 domain protein
YP_004107367.1	KEGG: bja:blr1183 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase
YP_004107368.1	KEGG: bja:blr1184 hypothetical protein
YP_004107369.1	PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: nha:Nham_0266 H+-transporting two-sector ATPase, B/B' subunit
YP_004107370.1	PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: nwi:Nwi_0236 H+-transporting two-sector ATPase, B/B' subunit
YP_004107371.1	PFAM: H+transporting two-sector ATPase C subunit; KEGG: nwi:Nwi_0237 F0F1 ATP synthase subunit C
YP_004107372.1	KEGG: nwi:Nwi_0238 F0F1 ATP synthase subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit
YP_004107373.1	manually curated; KEGG: nha:Nham_0270 FoF1 ATP synthase, subunit I
YP_004107374.1	PFAM: DSBA oxidoreductase; KEGG: bbt:BBta_0848 hypothetical protein
YP_004107375.1	KEGG: bja:blr1191 hypothetical protein
YP_004107376.1	PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein
YP_004107377.1	KEGG: bbt:BBta_0851 MFS family sugar transporter
YP_004107378.1	KEGG: bra:BRADO6680 two-component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver
YP_004107379.1	KEGG: bbt:BBta_0860 putative two-component hybrid sensor histidine kinase and response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Na+/solute symporter; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver
YP_004107380.1	TIGRFAM: 5-aminolevulinic acid synthase; KEGG: bra:BRADO6672 5-aminolevulinate synthase; PFAM: aminotransferase class I and II
YP_004107381.1	KEGG: bja:bll1202 hypothetical protein
YP_004107382.1	KEGG: bja:bll1203 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004107383.1	KEGG: bra:BRADO6669 putative outer-membrane immunogenic protein precursor; putative secreted protein
YP_004107384.1	KEGG: nha:Nham_3428 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107385.1	PFAM: ABC-3 protein; KEGG: nwi:Nwi_0915 ABC-type Mn2+/Zn2+ transport systems permease components
YP_004107386.1	PFAM: periplasmic solute binding protein; KEGG: oca:OCAR_4907 periplasmic chelated iron-binding protein YfeA
YP_004107387.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bbt:BBta_1342 putative cobalamin synthesis protein/P47K family protein
YP_004107388.1	PFAM: WD40 repeat, subgroup; KEGG: bja:bll7767 hypothetical protein
YP_004107389.1	PFAM: MgtC/SapB transporter; KEGG: bja:bll7766 hypothetical protein
YP_004107390.1	KEGG: oca:OCAR_4911 hypothetical protein
YP_004107391.1	KEGG: nwi:Nwi_0921 homospermidine synthase
YP_004107392.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: nha:Nham_3421 GreA/GreB family elongation factor
YP_004107393.1	PFAM: Endoribonuclease L-PSP; KEGG: bja:blr7761 hypothetical protein
YP_004107395.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr7760 hypothetical protein
YP_004107396.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: oca:OCAR_4918 ornithine decarboxylase
YP_004107397.1	KEGG: bra:BRADO6259 hypothetical protein
YP_004107398.1	KEGG: bja:bll7756 peptidyl-dipeptidase; PFAM: peptidase M3A and M3B thimet/oligopeptidase F
YP_004107399.1	PFAM: protein of unknown function DUF1007; KEGG: bja:bll7755 hypothetical protein
YP_004107400.1	PFAM: high-affinity nickel-transporter; KEGG: bja:bll7754 hypothetical protein
YP_004107401.1	TIGRFAM: ferrochelatase; KEGG: nha:Nham_3415 ferrochelatase; PFAM: ferrochelatase
YP_004107402.1	KEGG: bja:bll7750 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein
YP_004107403.1	PFAM: protein of unknown function DUF107; KEGG: bbt:BBta_1360 hypothetical protein
YP_004107404.1	KEGG: bpy:Bphyt_0019 transcriptional regulator, AraC family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004107405.1	TIGRFAM: KpsF/GutQ family protein; KEGG: nha:Nham_3413 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein
YP_004107406.1	manually curated; KEGG: bja:bll7745 hypothetical protein
YP_004107407.1	KEGG: bra:BRADO1091 hypothetical protein
YP_004107408.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:bll1500 hypothetical protein; SMART: GGDEF domain containing protein
YP_004107409.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: bbt:BBta_6959 UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase
YP_004107410.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:bll7739 lysophospholipase
YP_004107411.1	PFAM: heat shock protein Hsp20; KEGG: nwi:Nwi_2952 heat shock protein HSP20
YP_004107412.1	KEGG: bja:bll7742 hypothetical protein
YP_004107413.1	KEGG: nha:Nham_1138 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein
YP_004107414.1	KEGG: bbt:BBta_1370 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004107415.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pzu:PHZ_c1118 3-oxoacyl-[ACP] reductase
YP_004107416.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr1495 oxidoreductase
YP_004107417.1	PFAM: protein of unknown function DUF459; KEGG: bja:bll1497 hypothetical protein
YP_004107418.1	KEGG: bja:blr7382 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase
YP_004107419.1	KEGG: bja:bll1498 transglycolase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein
YP_004107420.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bra:BRADO6219 LysE family amino acid efflux protein
YP_004107421.1	PFAM: protein of unknown function DUF81; KEGG: met:M446_6144 hypothetical protein
YP_004107422.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll2418 hypothetical protein
YP_004107423.1	PFAM: regulatory protein TetR; KEGG: mlo:mlr2419 transcriptional regulator
YP_004107424.1	KEGG: bja:blr7731 inositol monophosphatase family protein; TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase
YP_004107426.1	PFAM: N-formylglutamate amidohydrolase; KEGG: bja:blr7730 hypothetical protein
YP_004107427.1	KEGG: nha:Nham_1143 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004107428.1	PFAM: regulatory protein TetR; KEGG: rle:RL2982 TetR family transcriptional regulator
YP_004107429.1	PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: rce:RC1_3068 oxidoreductase with iron-sulfur subunit, putative
YP_004107430.1	PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rce:RC1_3069 xanthine dehydrogenase YagS FAD-binding subunit,putative
YP_004107431.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rce:RC1_3070 xanthine dehydrogenase YagR molybdenum-binding subunit, putative
YP_004107432.1	KEGG: bbt:BBta_1649 hypothetical protein
YP_004107433.1	KEGG: bbt:BBta_1650 TrpR binding protein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase
YP_004107434.1	PFAM: Pirin domain protein; KEGG: bbt:BBta_1651 putative pirin family protein
YP_004107435.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:bll7565 transcriptional regulatory protein
YP_004107436.1	KEGG: bja:bll1491 hypothetical protein
YP_004107437.1	PFAM: protein of unknown function DUF179; KEGG: nha:Nham_3550 hypothetical protein
YP_004107438.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; Diverse 7TM receptor transmembrane region; Diverse 7TM receptor extracellular region 2; PAS fold-3 domain protein; GGDEF domain containing protein; KEGG: bja:bll1502 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein
YP_004107439.1	KEGG: bra:BRADO1103 putative NADPH quinone oxidoreductase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein
YP_004107440.1	PFAM: protein of unknown function DUF1192; KEGG: bja:bsr1504 hypothetical protein
YP_004107441.1	PFAM: protein of unknown function DUF1465; KEGG: bra:BRADO1105 hypothetical protein
YP_004107442.1	KEGG: bbt:BBta_6943 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31
YP_004107443.1	TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: nwi:Nwi_2746 ABC transporter, ATP-binding/permease protein; SMART: AAA ATPase
YP_004107444.1	PFAM: plasmid stabilization system; KEGG: rle:pRL70123 putative stabilisation protein
YP_004107445.1	KEGG: mea:Mex_1p4309 hypothetical protein
YP_004107446.1	PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_3543 GCN5-related N-acetyltransferase
YP_004107447.1	PFAM: OmpA/MotB domain protein; KEGG: bja:bll1510 hypothetical protein
YP_004107448.1	KEGG: bja:bll1511 hypothetical protein
YP_004107449.1	PFAM: protein of unknown function DUF1295; KEGG: bbt:BBta_6937 hypothetical protein
YP_004107450.1	PFAM: Methyltransferase type 11; KEGG: bra:BRADO1113 putative cyclopropane-fatty-acyl-phospholipid synthase
YP_004107451.1	KEGG: hha:Hhal_2261 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
YP_004107452.1	KEGG: fre:Franean1_5996 hypothetical protein
YP_004107453.1	KEGG: xau:Xaut_0314 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004107454.1	KEGG: xau:Xaut_0315 hypothetical protein
YP_004107455.1	KEGG: mno:Mnod_0507 hypothetical protein
YP_004107456.1	KEGG: bja:blr7630 decarboxylase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein
YP_004107457.1	KEGG: bja:blr7629 hypothetical protein; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein
YP_004107458.1	KEGG: oca:OCAR_5036 sterol binding protein
YP_004107459.1	PFAM: peptidase U32; KEGG: oca:OCAR_5037 peptidase U32
YP_004107460.1	PFAM: peptidase U32; KEGG: oca:OCAR_5038 peptidase U32
YP_004107461.1	PFAM: inositol monophosphatase; KEGG: oca:OCAR_7316 inositol-1-monophosphatase (IMPase)
YP_004107462.1	KEGG: nha:Nham_3536 Sel1; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein
YP_004107463.1	PFAM: thiamine monophosphate synthase; KEGG: nha:Nham_3535 thiamine monophosphate synthase
YP_004107464.1	KEGG: oca:OCAR_7313 fructose-bisphosphate aldolase class-I; PFAM: fructose-bisphosphate aldolase class-I
YP_004107465.1	KEGG: nwi:Nwi_2736 phosphoglycerate kinase; PFAM: phosphoglycerate kinase
YP_004107466.1	TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bra:BRADO1124 glyceraldehyde-3-phosphate dehydrogenase (GAPDH); PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
YP_004107467.1	KEGG: nwi:Nwi_2734 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region
YP_004107468.1	KEGG: nha:Nham_3530 hypothetical protein
YP_004107469.1	PFAM: protein of unknown function DUF710; KEGG: bbt:BBta_6921 cell division protein ZapA
YP_004107470.1	PFAM: (Uracil-5)-methyltransferase; KEGG: bra:BRADO2158 putative RNA methyltransferase
YP_004107471.1	KEGG: bja:bll0821 multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE
YP_004107472.1	KEGG: nha:Nham_0777 hemolysin A; TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein
YP_004107473.1	PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: bbt:BBta_2478 putative nucleoside 2-deoxyribosyltransferase
YP_004107474.1	KEGG: nha:Nham_0778 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein
YP_004107475.1	KEGG: nha:Nham_0779 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit
YP_004107476.1	PFAM: histone deacetylase superfamily; KEGG: bja:bll2653 hypothetical protein
YP_004107477.1	PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: bja:bll2654 putative 5'-nucleotidase family protein
YP_004107478.1	KEGG: bra:BRADO3396 putative signal peptide
YP_004107479.1	TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: nha:Nham_2994 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit
YP_004107480.1	KEGG: nha:Nham_2993 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004107481.1	TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: nha:Nham_2992 potassium-transporting ATPase subunit C; PFAM: K transporting ATPase KdpC subunit
YP_004107482.1	KEGG: nha:Nham_2991 osmosensitive K+ channel signal transduction histidine kinase; PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004107483.1	KEGG: nha:Nham_2990 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004107484.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nha:Nham_0781 enoyl-CoA hydratase/isomerase
YP_004107485.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_2498 putative acyl-CoA dehydrogenase
YP_004107486.1	TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; KEGG: rle:pRL90293 putative UreA amidolyase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1
YP_004107487.1	KEGG: rlg:Rleg_6106 UreA carboxylase-associated protein 1; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989
YP_004107488.1	KEGG: xau:Xaut_1224 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989
YP_004107489.1	KEGG: azc:AZC_4399 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107490.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1226 binding-protein-dependent transport systems inner membrane component
YP_004107491.1	KEGG: xau:Xaut_1227 NlpA lipoprotein; TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; PFAM: NLPA lipoprotein
YP_004107492.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bja:blr5269 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver
YP_004107493.1	TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bja:blr1071 transcriptional regulatory protein; SMART: regulatory protein IclR
YP_004107494.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:bll1070 dioxygenase
YP_004107495.1	PFAM: glutamine synthetase catalytic region; KEGG: mno:Mnod_8463 glutamine synthetase catalytic region
YP_004107496.1	PFAM: Extracellular ligand-binding receptor; KEGG: bov:BOV_A0610 amino acid ABC transporter, periplasmic amino-acid binding protein
YP_004107497.1	PFAM: inner-membrane translocator; KEGG: bmr:BMI_II646 branched-chain amino acid ABC transporter, permease protein
YP_004107498.1	PFAM: inner-membrane translocator; KEGG: ara:Arad_9508 branched-chain amino acid ABC transporter
YP_004107499.1	KEGG: azl:AZL_d00570 branched-chain amino acid transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107500.1	KEGG: rec:RHECIAT_CH0003687 probable branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107501.1	KEGG: atc:AGR_C_3927 hypothetical protein; PFAM: PAS fold-2 domain protein; GAF domain protein; Phytochrome central region domain protein; HWE histidine kinase; response regulator receiver; SMART: GAF domain protein; response regulator receiver
YP_004107502.1	SMART: regulatory protein Crp; KEGG: bja:blr0536 transcriptional regulatory protein
YP_004107503.1	PFAM: cyclic nucleotide-binding; KEGG: bbt:BBta_6056 Crp/FNR family transcriptional regulator
YP_004107504.1	PFAM: Phosphoglycerate mutase; KEGG: bja:bll327 cobalamin synthesis protein
YP_004107505.1	KEGG: rsq:Rsph17025_3448 hypothetical protein
YP_004107506.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pla:Plav_0463 acyl-CoA dehydrogenase domain-containing protein
YP_004107507.1	KEGG: bbt:BBta_7584 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004107508.1	KEGG: bja:bll0199 nitrile hydratase regulator
YP_004107509.1	PFAM: Amidase; KEGG: bja:bll0198 amidase
YP_004107510.1	PFAM: inner-membrane translocator; KEGG: bja:bll0197 ABC transporter permease protein
YP_004107511.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:bll0196 ABC transporter substrate-binding protein
YP_004107512.1	PFAM: inner-membrane translocator; KEGG: bja:bll0195 ABC transporter permease protein
YP_004107513.1	KEGG: bja:bll0194 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107514.1	KEGG: bja:bll0193 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107515.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:bll2527 putative hydrolase
YP_004107516.1	KEGG: mdi:METDI0764 transcriptional regulator, ArsR family; putative SoxR protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004107517.1	KEGG: rme:Rmet_2371 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_004107518.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pyridine nucleotide-disulfide oxidoreductase family protein
YP_004107519.1	PFAM: Methyltransferase type 12; KEGG: tbd:Tbd_2330 hypothetical protein
YP_004107520.1	KEGG: azl:AZL_007750 nitrogenase-associated protein; TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related
YP_004107521.1	PFAM: Protein of unknown function DUF2478; KEGG: bja:blr6953 molybdenum ABC transporter ATP-binding protein
YP_004107522.1	KEGG: bja:bll6950 putative pyrophosphorylase; TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase
YP_004107523.1	KEGG: der:Dere_GG20400 GG20400 gene product from transcript GG20400-RA
YP_004107524.1	PFAM: AMP-dependent synthetase and ligase; KEGG: xau:Xaut_4075 AMP-dependent synthetase and ligase
YP_004107525.1	KEGG: bra:BRADO2820 hypothetical protein
YP_004107526.1	PFAM: NUDIX hydrolase; KEGG: bja:bll6630 hypothetical protein
YP_004107527.1	PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: bbt:BBta_2733 protocatechuate 4,5-dioxygenase subunit alpha
YP_004107528.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bbt:BBta_2734 protocatechuate 4,5-dioxygenase subunit beta
YP_004107529.1	PFAM: cytochrome P450; KEGG: bra:BRADO2350 putative cytochrome P450
YP_004107530.1	KEGG: bra:BRADO5343 hypothetical protein
YP_004107531.1	PFAM: protein of unknown function DUF81; KEGG: mlo:mll3907 putative integral membrane protein
YP_004107532.1	TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: bra:BRADO3206 nitrogen fixation protein FixG
YP_004107533.1	KEGG: bja:bsr3073 hypothetical protein
YP_004107534.1	PFAM: transcriptional regulator PadR family protein; KEGG: xau:Xaut_0164 PadR-like family transcriptional regulator
YP_004107535.1	KEGG: bbt:BBta_p0097 ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain
YP_004107536.1	KEGG: rsq:Rsph17025_1840 hypothetical protein
YP_004107537.1	KEGG: bra:BRADO4593 hypothetical protein
YP_004107538.1	KEGG: bja:bll5773 transcriptional regulatory protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004107539.1	KEGG: bbt:BBta_3720 RND family efflux pump membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004107540.1	PFAM: acriflavin resistance protein; KEGG: bja:bll5771 AcrB/AcrD/AcrF family cation efflux protein
YP_004107541.1	PFAM: DSBA oxidoreductase; KEGG: bja:blr1349 hypothetical protein
YP_004107542.1	KEGG: app:CAP2UW1_2673 hypothetical protein
YP_004107543.1	PFAM: Ferric reductase domain protein transmembrane component domain; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: app:CAP2UW1_2674 ferric reductase domain protein protein transmembrane component domain protein
YP_004107544.1	PFAM: cytochrome b5; KEGG: app:CAP2UW1_2675 cytochrome b5
YP_004107545.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: nha:Nham_3225 DNA methylase N-4/N-6
YP_004107546.1	PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: nwi:Nwi_2602 hypothetical protein
YP_004107547.1	KEGG: bja:blr2511 molybdopterin biosynthesis protein B; TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain
YP_004107548.1	PFAM: coenzyme A transferase; KEGG: bja:bll1293 glutaconate CoA-transferase subunit A
YP_004107549.1	PFAM: coenzyme A transferase; KEGG: bja:bll1292 hypothetical protein
YP_004107550.1	PFAM: amino acid permease-associated region; KEGG: pmy:Pmen_3544 amino acid permease-associated region
YP_004107551.1	PFAM: putative RNA methylase; KEGG: rce:RC1_1514 hypothetical protein
YP_004107552.1	KEGG: ani:AN6720.2 hypothetical protein
YP_004107553.1	KEGG: bja:bll2512 transcriptional regulatory protein; PFAM: regulatory protein MarR; GCN5-related N-acetyltransferase; SMART: regulatory protein MarR
YP_004107554.1	PFAM: glycosyl transferase family 2; KEGG: bja:bll2513 hypothetical protein
YP_004107555.1	KEGG: bja:blr2519 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004107556.1	KEGG: bbt:BBta_2343 ribonuclease HII; PFAM: ribonuclease HII/HIII
YP_004107557.1	KEGG: nha:Nham_3220 hypothetical protein
YP_004107558.1	KEGG: azc:AZC_1729 TonB-dependent siderophore receptor precursor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug
YP_004107559.1	KEGG: bra:BRADO2019 putative DNA polymerases; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily
YP_004107560.1	KEGG: bra:BRADO2020 putative electron transfer flavoprotein dehydrogenases; PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_004107561.1	PFAM: TPR repeat-containing protein; KEGG: bja:blr2525 hypothetical protein
YP_004107562.1	TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: nha:Nham_3216 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein
YP_004107563.1	PFAM: Polyprenyl synthetase; KEGG: bbt:BBta_2349 octaprenyl diphosphate synthase
YP_004107564.1	PFAM: Protein of unknown function DUF2007; KEGG: nwi:Nwi_2591 hypothetical protein
YP_004107565.1	PFAM: methyltransferase small; KEGG: bra:BRADO2025 hypothetical protein
YP_004107566.1	KEGG: bra:BRADO2026 hypothetical protein
YP_004107567.1	PFAM: peptidase S49; KEGG: bja:blr2534 proteinase
YP_004107568.1	KEGG: bbt:BBta_2354 hypothetical protein
YP_004107569.1	TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: nwi:Nwi_2587 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit
YP_004107570.1	manually curated; KEGG: bbt:BBta_2356 hypothetical protein
YP_004107571.1	TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: nwi:Nwi_2586 glycyl-tRNA synthetase subunit beta
YP_004107572.1	KEGG: cak:Caul_3593 hypothetical protein
YP_004107573.1	KEGG: acr:Acry_0183 membrane protein-like protein
YP_004107574.1	KEGG: mpo:Mpop_3015 hypothetical protein
YP_004107575.1	TIGRFAM: pyruvate, phosphate dikinase; KEGG: bja:blr2538 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein
YP_004107576.1	PFAM: cell wall hydrolase SleB; KEGG: nha:Nham_3504 cell wall hydrolase, SleB
YP_004107577.1	TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: bja:bll2540 nicotinate-mononucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_004107578.1	KEGG: bja:bll2541 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_004107579.1	TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: oca:OCAR_6942 quinolinate synthetase; PFAM: Quinolinate synthetase A
YP_004107580.1	KEGG: nha:Nham_3502 alcohol dehydrogenase GroES-like protein; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein
YP_004107581.1	KEGG: nha:Nham_3501 hypothetical protein
YP_004107582.1	KEGG: pmy:Pmen_3748 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH
YP_004107583.1	PFAM: Threonyl/alanyl tRNA synthetase SAD; Alanyl-tRNA synthetase, class IIc-like; KEGG: rso:RSc0988 hypothetical protein
YP_004107584.1	PFAM: Protein of unknown function DUF2339, transmembrane; KEGG: bja:bll2549 hypothetical protein
YP_004107585.1	KEGG: nhl:Nhal_4024 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase
YP_004107586.1	KEGG: hsa:80324 pseudouridylate synthase 1
YP_004107587.1	KEGG: bja:bll2550 hypothetical protein
YP_004107588.1	KEGG: nha:Nham_4022 hypothetical protein
YP_004107589.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: nha:Nham_4021 metal dependent phosphohydrolase
YP_004107590.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nar:Saro_2477 LysR family transcriptional regulator
YP_004107591.1	PFAM: protein of unknown function DUF897; KEGG: jan:Jann_0109 hypothetical protein
YP_004107592.1	TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: bja:bll2553 3-methyladenine-DNA glycosylase; PFAM: methyladenine glycosylase
YP_004107593.1	KEGG: nwi:Nwi_2704 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel
YP_004107594.1	TIGRFAM: dihydroorotase, multifunctional complex type; KEGG: nha:Nham_4018 dihydroorotase; PFAM: amidohydrolase
YP_004107595.1	KEGG: bra:BRADO5216 hypothetical protein
YP_004107596.1	KEGG: nha:Nham_4017 hypothetical protein
YP_004107597.1	PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_2701 hypothetical protein
YP_004107598.1	PFAM: NUDIX hydrolase; KEGG: bja:bll2562 GDP-mannose mannosyl hydrolase
YP_004107599.1	KEGG: nha:Nham_4012 hypothetical protein
YP_004107600.1	PFAM: protein of unknown function DUF159; KEGG: bja:blr2564 hypothetical protein
YP_004107601.1	PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_2386 putative D-lactate ferricytochrome c oxidoreductase
YP_004107602.1	KEGG: bja:bll2570 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein
YP_004107603.1	KEGG: azc:AZC_3223 putative transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004107604.1	PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_3224 putative 4-methylmuconolactone transporter
YP_004107605.1	PFAM: amidohydrolase 2; KEGG: azc:AZC_3225 putative 2-pyrone-4,6-dicarboxylate hydrolase
YP_004107606.1	KEGG: met:M446_2417 hypothetical protein
YP_004107607.1	PFAM: Curlin associated repeat protein; KEGG: ppw:PputW619_2955 curlin-associated protein
YP_004107608.1	KEGG: mes:Meso_0925 hypothetical protein
YP_004107609.1	KEGG: bur:Bcep18194_B2589 hypothetical protein
YP_004107610.1	PFAM: Curli production assembly/transport component CsgF; KEGG: mpo:Mpop_0031 hypothetical protein
YP_004107611.1	PFAM: Curli production assembly/transport component CsgG; KEGG: met:M446_2419 curli production assembly/transport component CsgG
YP_004107612.1	PFAM: Lytic transglycosylase catalytic; KEGG: met:M446_4519 lytic transglycosylase catalytic
YP_004107613.1	KEGG: mpo:Mpop_0037 hypothetical protein
YP_004107614.1	KEGG: xau:Xaut_1427 hypothetical protein
YP_004107615.1	KEGG: mag:amb3351 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding
YP_004107616.1	KEGG: azo:azo2883 hypothetical protein
YP_004107617.1	KEGG: azl:AZL_025200 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase
YP_004107618.1	KEGG: nwi:Nwi_0607 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II
YP_004107619.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_2451 glutaryl-CoA dehydrogenase
YP_004107620.1	KEGG: bra:BRADO2135 putative beta-lactamase
YP_004107621.1	KEGG: bja:bll1533 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004107622.1	PFAM: protein of unknown function DUF28; KEGG: bja:blr1534 hypothetical protein
YP_004107623.1	TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: oca:OCAR_7302 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC
YP_004107624.1	KEGG: bja:blr1536 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein
YP_004107625.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bbt:BBta_6907 hypothetical protein
YP_004107626.1	TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: nha:Nham_3521 Holliday junction DNA helicase RuvB; SMART: AAA ATPase
YP_004107627.1	KEGG: hsl:OE3653R phosphoglyceromutase
YP_004107628.1	KEGG: nha:Nham_3520 4-hydroxybenzoyl-CoA thioesterase; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein
YP_004107629.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tmz:Tmz1t_3718 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004107630.1	PFAM: conserved hypothetical protein; KEGG: bja:bll7876 putative OpgC protein
YP_004107631.1	PFAM: protein of unknown function DUF1348; KEGG: bja:bll7210 hypothetical protein
YP_004107632.1	PFAM: regulatory protein TetR; KEGG: xau:Xaut_1146 TetR family transcriptional regulator
YP_004107633.1	PFAM: YCII-related; KEGG: mno:Mnod_1364 YCII-related
YP_004107634.1	KEGG: bja:bll7170 hypothetical protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004107635.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr7165 oxidoreductase
YP_004107636.1	KEGG: rsh:Rsph17029_3809 hypothetical protein
YP_004107637.1	KEGG: bra:BRADO3129 hypothetical protein
YP_004107638.1	PFAM: YCII-related; KEGG: nha:Nham_3518 hypothetical protein
YP_004107639.1	PFAM: regulatory protein TetR; KEGG: nha:Nham_3517 TetR family transcriptional regulator
YP_004107640.1	KEGG: bja:bll7160 hypothetical protein
YP_004107641.1	KEGG: nha:Nham_3277 alkylhydroperoxidase AhpD core; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase
YP_004107642.1	KEGG: sme:SM_b20030 RNA polymerase sigma factor SigJ; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004107643.1	KEGG: bbt:BBta_6884 TolQ protein; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel
YP_004107644.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bra:BRADO1171 putative TolR protein
YP_004107645.1	KEGG: nha:Nham_3513 putative TolA
YP_004107646.1	KEGG: nha:Nham_3512 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller
YP_004107647.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: nha:Nham_3511 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein
YP_004107648.1	KEGG: nha:Nham_3510 hypothetical protein
YP_004107649.1	KEGG: bja:bll7149 peptidoglycan-associated lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein
YP_004107650.1	TIGRFAM: tol-pal system protein YbgF; KEGG: bja:bll7148 hypothetical protein
YP_004107651.1	KEGG: bja:bll7147 hypothetical protein; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein
YP_004107652.1	SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: nha:Nham_3506 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein
YP_004107653.1	KEGG: tmz:Tmz1t_1487 hypothetical protein
YP_004107654.1	PFAM: AzlC family protein; KEGG: azc:AZC_0085 putative branched-chain amino acid transport protein
YP_004107655.1	PFAM: branched-chain amino acid transport; KEGG: xau:Xaut_1764 branched-chain amino acid transport
YP_004107656.1	PFAM: regulatory protein TetR; KEGG: bbt:BBta_6871 TetR family transcriptional regulator
YP_004107657.1	PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_1662 glycolate oxidase, subunit GlcD
YP_004107658.1	PFAM: FAD linked oxidase domain protein; KEGG: bja:bll7541 glycolate oxidase subunit
YP_004107659.1	PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: nha:Nham_3202 protein of unknown function DUF224, cysteine-rich region
YP_004107660.1	KEGG: pfs:PFLU5927 transcriptional regulatory protein algp (alginate regulatory protein algr3)
YP_004107661.1	KEGG: oca:OCAR_7278 hypothetical protein
YP_004107662.1	KEGG: bbt:BBta_1667 putative ABC transporter (fused ATP-binding and permease components); PFAM: ABC transporter domain protein; ABC transporter related; SMART: AAA ATPase
YP_004107663.1	KEGG: nha:Nham_3198 hypothetical protein
YP_004107664.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: oca:OCAR_7274 amine oxidase
YP_004107665.1	KEGG: bbt:BBta_1670 hypothetical protein
YP_004107666.1	KEGG: bbt:BBta_1671 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1
YP_004107667.1	PFAM: Chaperonin Cpn10; KEGG: nwi:Nwi_2573 co-chaperonin GroES
YP_004107668.1	KEGG: bja:bll7531 hypothetical protein
YP_004107669.1	PFAM: major facilitator superfamily MFS_1; KEGG: oca:OCAR_7269 major facilitator superfamily MFS_1
YP_004107670.1	KEGG: bbt:BBta_1674 hypothetical protein
YP_004107671.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_3192 ErfK/YbiS/YcfS/YnhG
YP_004107672.1	PFAM: Protein of unknown function DUF2076; KEGG: bja:blr7528 hypothetical protein
YP_004107673.1	PFAM: YdjC family protein; KEGG: nha:Nham_3190 YdjC-like protein
YP_004107674.1	PFAM: glycosyl transferase family 2; KEGG: bja:blr7526 glycosyl transferase
YP_004107675.1	TIGRFAM: ATP phosphoribosyltransferase; KEGG: bra:BRADO6107 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region
YP_004107676.1	KEGG: bra:BRADO6106 ATP phosphoribosyltransferase regulatory subunit; PFAM: tRNA synthetase class II (G H P and S)
YP_004107677.1	PFAM: protein of unknown function DUF558; KEGG: bja:blr7523 16S ribosomal RNA methyltransferase RsmE
YP_004107678.1	KEGG: bja:bll7522 hypothetical protein
YP_004107679.1	KEGG: bja:bll7521 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase
YP_004107680.1	KEGG: bra:BRADO6101 hypothetical protein
YP_004107681.1	KEGG: bja:bll7519 PmbA/TldD related protein; manually curated; PFAM: peptidase U62 modulator of DNA gyrase
YP_004107682.1	PFAM: inositol monophosphatase; KEGG: nha:Nham_3181 inositol monophosphatase
YP_004107683.1	KEGG: nha:Nham_3180 hypothetical protein
YP_004107684.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: bra:BRADO6096 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase)
YP_004107685.1	TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: nha:Nham_3177 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase
YP_004107686.1	PFAM: Protein of unknown function DUF2093; KEGG: bra:BRADO6094 hypothetical protein
YP_004107687.1	TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: nwi:Nwi_2553 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type
YP_004107688.1	TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: nha:Nham_3173 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain
YP_004107689.1	PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO6083 putative hydrolase
YP_004107690.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: oca:OCAR_7244 tRNA-specific adenosine deaminase
YP_004107691.1	KEGG: nha:Nham_3171 pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein
YP_004107692.1	KEGG: bja:bll7494 hypothetical protein; TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein
YP_004107693.1	KEGG: bja:blr7474 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small
YP_004107694.1	PFAM: molybdopterin biosynthesis MoaE protein; KEGG: nha:Nham_3143 molybdopterin biosynthesis MoaE
YP_004107695.1	KEGG: bbt:BBta_1725 molybdopterin synthase subunit MoaD; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein
YP_004107696.1	TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: nwi:Nwi_2525 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004107697.1	TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: nha:Nham_3146 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1
YP_004107698.1	KEGG: bja:bll7469 putative outer-membrane immunogenic protein precursor
YP_004107699.1	KEGG: bra:BRADO6053 cold shock protein, DNA binding; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_004107700.1	PFAM: protein of unknown function DUF519; KEGG: nha:Nham_3149 hypothetical protein
YP_004107701.1	KEGG: nha:Nham_3160 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004107702.1	KEGG: bja:bll7455 hypothetical protein
YP_004107703.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: bbt:BBta_1741 putative 4-oxalocrotonate tautomerase
YP_004107704.1	TIGRFAM: histidyl-tRNA synthetase; KEGG: nwi:Nwi_2533 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein
YP_004107705.1	KEGG: bbt:BBta_1722 beta alanine--pyruvate transaminase; PFAM: aminotransferase class-III
YP_004107706.1	KEGG: bra:BRADO6063 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein
YP_004107707.1	KEGG: bja:blr7478 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; HAD-superfamily subfamily IIA hydrolase like protein; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004107708.1	PFAM: protein of unknown function DUF1355; KEGG: bra:BRADO1961 hypothetical protein
YP_004107709.1	TIGRFAM: conserved hypothetical protein; KEGG: nha:Nham_3253 double-transmembrane region-like
YP_004107710.1	PFAM: protein of unknown function DUF58; KEGG: bbt:BBta_2270 hypothetical protein
YP_004107711.1	PFAM: ATPase associated with various cellular activities AAA_3; KEGG: bbt:BBta_2271 putative MoxR family protein
YP_004107712.1	PFAM: protein of unknown function DUF1285; KEGG: nwi:Nwi_2625 hypothetical protein
YP_004107713.1	PFAM: NUDIX hydrolase; KEGG: bra:BRADO1966 putative NUDIX hydrolase
YP_004107714.1	KEGG: bbt:BBta_2274 hypothetical protein
YP_004107715.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: nha:Nham_3247 polynucleotide adenylyltransferase region
YP_004107716.1	PFAM: Protein of unknown function DUF2158; KEGG: bja:bsl2479 hypothetical protein
YP_004107717.1	PFAM: Radical SAM domain protein; KEGG: nwi:Nwi_2619 hypothetical protein
YP_004107718.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: nwi:Nwi_2618 tRNA/rRNA methyltransferase (SpoU)
YP_004107719.1	KEGG: bja:blr2485 Rieske iron-sulfur protein; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain
YP_004107720.1	PFAM: cytochrome c1; Cytochrome b/b6 domain; KEGG: bbt:BBta_2301 cytochrome b/c1
YP_004107721.1	KEGG: bja:blr2487 hypothetical protein
YP_004107722.1	manually curated; KEGG: bbt:BBta_2461 hypothetical protein
YP_004107723.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_2462 short-chain dehydrogenase
YP_004107724.1	TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: bja:bll2624 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like
YP_004107725.1	KEGG: nha:Nham_0766 hypothetical protein
YP_004107726.1	KEGG: bra:BRADO2148 putative heat shock protein DnaJ; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein
YP_004107727.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2151 enoyl-(acyl carrier protein) reductase
YP_004107728.1	PFAM: Phosphoglycerate mutase; KEGG: bja:blr2630 phosphoglycerate mutase
YP_004107729.1	TIGRFAM: chorismate synthase; KEGG: bja:blr2631 chorismate synthase; PFAM: chorismate synthase
YP_004107730.1	KEGG: bja:blr2632 putative adenylate cyclase protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase
YP_004107731.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: bja:bll2636 ATP-dependent Clp protease adaptor
YP_004107732.1	PFAM: protein of unknown function DUF1194; KEGG: bja:blr2641 hypothetical protein
YP_004107733.1	PFAM: Carotenoid oxygenase; KEGG: bja:blr5790 putative lignostilbene-alpha,beta-dioxygenase
YP_004107734.1	KEGG: hha:Hhal_0248 hypothetical protein
YP_004107735.1	KEGG: hha:Hhal_0249 hypothetical protein
YP_004107736.1	KEGG: hha:Hhal_0250 hypothetical protein
YP_004107737.1	PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO1608 putative alpha/beta hydrolase fold
YP_004107738.1	PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: bja:blr5601 hypothetical protein
YP_004107739.1	KEGG: bbt:BBta_5258 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_004107740.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2920 putative ABC transporter (permease protein); putative membrane protein
YP_004107741.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_5256 putative ABC transporter (permease protein)
YP_004107742.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bbt:BBta_5255 carboxypeptidase
YP_004107743.1	PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_5254 putative ABC transporter (substrate-binding protein)
YP_004107744.1	KEGG: dwi:Dwil_GK22681 GK22681 gene product from transcript GK22681-RA
YP_004107745.1	KEGG: bbt:BBta_3002 signal-transduction protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein
YP_004107746.1	KEGG: bln:Blon_1962 sulfatase
YP_004107747.1	PFAM: CHAD domain containing protein; KEGG: mch:Mchl_3398 CHAD domain containing protein
YP_004107748.1	KEGG: psb:Psyr_0088 PAS:GGDEF
YP_004107749.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: chy:CHY_0121 indolepyruvate ferredoxin oxidoreductase, IorA subunit
YP_004107750.1	KEGG: bra:BRADO5083 putative methyl-accepting chemotaxis protein
YP_004107751.1	PFAM: Hpt domain protein; KEGG: bja:bll5886 two-component hybrid sensor and regulator
YP_004107752.1	PFAM: ferredoxin; KEGG: bja:bll5885 ferrodoxin
YP_004107753.1	PFAM: thioesterase superfamily protein; KEGG: bja:blr5884 hypothetical protein
YP_004107754.1	KEGG: nha:Nham_1321 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004107755.1	PFAM: Cl- channel voltage-gated family protein; KEGG: bra:BRADO3095 putative H(+)/Cl(-) exchange transporter
YP_004107756.1	PFAM: glycosyl transferase family 2; KEGG: ppd:Ppro_3227 glycosyl transferase family protein
YP_004107757.1	PFAM: glycosyl transferase group 1; KEGG: bte:BTH_I1330 glycosyltransferase WbpX, putative
YP_004107758.1	KEGG: aeh:Mlg_2800 O-antigen polymerase
YP_004107759.1	PFAM: Protein of unknown function DUF2147; KEGG: bja:bll5882 hypothetical protein
YP_004107760.1	KEGG: bbt:BBta_5548 hypothetical protein
YP_004107761.1	KEGG: nha:Nham_1324 hypothetical protein
YP_004107763.1	PFAM: protein of unknown function DUF892; KEGG: bja:bll5866 hypothetical protein
YP_004107764.1	KEGG: nha:Nham_1325 hypothetical protein
YP_004107765.1	KEGG: nha:Nham_1326 hypothetical protein
YP_004107766.1	PFAM: UspA domain protein; KEGG: bra:BRADO5069 putative universal stress protein (Usp)
YP_004107767.1	PFAM: Phosphoglycerate mutase; KEGG: nha:Nham_1328 putative phosphohistidine phosphatase, SixA
YP_004107768.1	PFAM: FAD dependent oxidoreductase; KEGG: bja:bll5856 hypothetical protein
YP_004107769.1	TIGRFAM: methionine-R-sulfoxide reductase; KEGG: nha:Nham_1330 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B
YP_004107770.1	KEGG: cbd:CBUD_1484 undecaprenyl-phosphomannose:protein mannosyltransferase
YP_004107771.1	KEGG: bbt:BBta_2392 hypothetical protein
YP_004107772.1	KEGG: oca:OCAR_5369 flagellar basal body FlaE domain protein; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein
YP_004107773.1	KEGG: oca:OCAR_5370 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_004107774.1	KEGG: oca:OCAR_5371 hypothetical protein
YP_004107775.1	PFAM: protein of unknown function DUF1522; KEGG: bja:bll5846 flagellin
YP_004107776.1	TIGRFAM: methyltransferase FkbM family; KEGG: cyn:Cyan7425_2162 methyltransferase FkbM family
YP_004107777.1	PFAM: sugar isomerase (SIS); KEGG: rlt:Rleg2_5603 sugar isomerase (SIS)
YP_004107778.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: bbt:BBta_5633 putative sugar-nucleotide epimerase/dehydratase
YP_004107779.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: bbt:BBta_5635 putative dTDP-glucose 4,6-dehydratase
YP_004107780.1	PFAM: Methyltransferase type 11; KEGG: cbd:CBUD_0696 methyltransferase
YP_004107781.1	KEGG: cbu:CBU_0693 putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component
YP_004107782.1	PFAM: Transketolase central region; Transketolase domain protein; KEGG: cbd:CBUD_0706 pyruvate dehydrogenase E1 component beta subunit
YP_004107784.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_5638 putative alcohol dehydrogenase (zinc-binding)
YP_004107785.1	KEGG: bra:BRADO5164 putative bifunctional enzyme (sugar kinase/cytidylyltransferase); TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; PfkB domain protein
YP_004107786.1	PFAM: Nucleotidyl transferase; KEGG: bbt:BBta_5632 putative sugar-phosphate nucleotidyl transferase
YP_004107787.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lhk:LHK_02873 probable oxidoreductase
YP_004107788.1	PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sus:Acid_2243 thiamine pyrophosphate binding domain-containing protein
YP_004107789.1	KEGG: bra:BRADO1360 O-linked N-acetylglucosamine transferase; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat
YP_004107790.1	PFAM: protein of unknown function DUF1522; KEGG: bja:bll5846 flagellin
YP_004107791.1	PFAM: flagellar FlbT family protein; KEGG: bra:BRADO7004 flagellar biosynthesis repressor FlbT
YP_004107792.1	PFAM: flagellar FlaF family protein; KEGG: oca:OCAR_5375 flagellar biosynthesis regulatory protein FlaF
YP_004107793.1	KEGG: nha:Nham_1340 hypothetical protein
YP_004107794.1	KEGG: nwi:Nwi_1109 hypothetical protein
YP_004107795.1	PFAM: Flagellar protein FlgJ-like; KEGG: nwi:Nwi_1110 chemotactic signal-response protein CheL
YP_004107796.1	PFAM: flagellar P-ring protein; KEGG: bbt:BBta_5520 flagellar basal body P-ring protein
YP_004107797.1	PFAM: Flagellar assembly regulator FliX, class II; KEGG: bja:bll5837 flagellar assembly regulator FliX
YP_004107798.1	manually curated; TIGRFAM: RNA polymerase-binding protein DksA; KEGG: nha:Nham_1346 TraR/DksA family transcriptional regulator; PFAM: zinc finger DksA/TraR C4-type
YP_004107799.1	KEGG: nha:Nham_0415 hypothetical protein
YP_004107800.1	PFAM: regulatory protein TetR; KEGG: atc:AGR_C_4219 hypothetical protein
YP_004107801.1	KEGG: rhi:NGR_c35220 putative efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004107802.1	KEGG: atc:AGR_L_3217 RND multidrug efflux transporter MexD; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein
YP_004107803.1	PFAM: flagellar L-ring protein; KEGG: nha:Nham_1381 flagellar basal body L-ring protein
YP_004107804.1	KEGG: nha:Nham_1382 flagellar basal body P-ring biosynthesis protein FlgA; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein
YP_004107805.1	KEGG: nha:Nham_1383 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_004107806.1	KEGG: nha:Nham_1384 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein
YP_004107807.1	PFAM: flagellar basal body-associated protein FliL; KEGG: bbt:BBta_5508 flagellar basal body-associated protein FliL
YP_004107808.1	KEGG: nwi:Nwi_1124 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein
YP_004107809.1	KEGG: bja:bll5824 hypothetical protein
YP_004107810.1	KEGG: nha:Nham_1388 hypothetical protein
YP_004107811.1	KEGG: bja:blr5534 hypothetical protein
YP_004107812.1	KEGG: nha:Nham_1389 tetratricopeptide TPR_4 protein
YP_004107813.1	manually curated; TIGRFAM: flagellar biosynthetic protein FliP; KEGG: nha:Nham_1390 flagellar biosynthesis protein FliP; PFAM: type III secretion system inner membrane P protein
YP_004107814.1	KEGG: bbt:BBta_5498 hypothetical protein
YP_004107815.1	PFAM: flagellar basal body rod protein; KEGG: bra:BRADO5029 flagellar basal body rod protein FlgB
YP_004107816.1	KEGG: bja:bll5813 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_004107817.1	PFAM: flagellar hook-basal body complex protein FliE; KEGG: bja:bll5812 flagellar hook-basal body protein FliE
YP_004107818.1	PFAM: export protein FliQ family 3; KEGG: nwi:Nwi_1135 flagellar biosynthesis protein FliQ
YP_004107819.1	KEGG: bja:bll5810 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein
YP_004107820.1	KEGG: bra:BRADO5024 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter
YP_004107821.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: nha:Nham_1398 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver
YP_004107822.1	PFAM: FRG domain protein; KEGG: pla:Plav_0332 FRG domain-containing protein
YP_004107823.1	KEGG: mpo:Mpop_2510 hypothetical protein
YP_004107824.1	PFAM: import inner membrane translocase subunit Tim44; KEGG: bja:bll5807 hypothetical protein
YP_004107825.1	PFAM: Glutathione S-transferase domain; KEGG: bja:bll5800 hypothetical protein
YP_004107826.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: nha:Nham_2565 glutathione-dependent formaldehyde-activating, GFA
YP_004107827.1	KEGG: dmo:Dmoj_GI10546 GI10546 gene product from transcript GI10546-RA
YP_004107828.1	KEGG: nha:Nham_2563 hypothetical protein
YP_004107829.1	manually curated; KEGG: xau:Xaut_3830 hypothetical protein
YP_004107830.1	PFAM: plasmid stabilization system; KEGG: sme:SMa0473 hypothetical protein
YP_004107831.1	KEGG: bja:bll5796 fumarate hydratase class I; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type hydro-lyase tartrate/fumarate alpha region
YP_004107832.1	KEGG: cpc:Cpar_0295 hypothetical protein
YP_004107833.1	KEGG: bbt:BBta_5480 hypothetical protein
YP_004107834.1	KEGG: sus:Acid_6846 NHL repeat-containing protein
YP_004107835.1	KEGG: bja:blr5793 hypothetical protein
YP_004107836.1	KEGG: bja:blr5788 hypothetical protein
YP_004107837.1	KEGG: bbt:BBta_5473 histone-lysine N-methyltransferase; PFAM: nuclear protein SET; SMART: nuclear protein SET
YP_004107838.1	KEGG: bra:BRADO5003 hypothetical protein
YP_004107839.1	KEGG: bbt:BBta_5469 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004107840.1	PFAM: DSBA oxidoreductase; KEGG: bbt:BBta_5468 hypothetical protein
YP_004107841.1	KEGG: nwi:Nwi_1273 hypothetical protein
YP_004107842.1	PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: nwi:Nwi_1274 peptidase C14, caspase catalytic subunit P20
YP_004107843.1	PFAM: thioesterase superfamily protein; KEGG: bja:blr5765 hypothetical protein
YP_004107844.1	KEGG: tfu:Tfu_1773 FKBP-type peptidyl-prolyl cis-trans isomerase 1
YP_004107845.1	KEGG: nha:Nham_1522 hypothetical protein
YP_004107846.1	KEGG: bja:bll2244 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp
YP_004107847.1	manually curated; KEGG: bbt:BBta_5457 hypothetical protein
YP_004107848.1	KEGG: met:M446_4370 triple helix repeat-containing collagen
YP_004107849.1	KEGG: oaa:100075123 similar to splicing coactivator subunit SRm300
YP_004107850.1	KEGG: nml:Namu_4871 major facilitator superfamily MFS_1
YP_004107851.1	KEGG: nha:Nham_4592 hypothetical protein
YP_004107852.1	TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: nha:Nham_1616 recombinase A; SMART: AAA ATPase
YP_004107853.1	KEGG: bja:blr5753 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_004107854.1	KEGG: bra:BRADO4983 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein
YP_004107855.1	KEGG: bja:blr5751 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel
YP_004107856.1	KEGG: bja:bll5750 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1
YP_004107857.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_3334 GCN5-related N-acetyltransferase
YP_004107858.1	PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: kefC2; glutathione-regulated potassium-efflux system protein KefC-2
YP_004107859.1	KEGG: oca:OCAR_5438 inner membrane protein YbaL; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein
YP_004107860.1	KEGG: pfl:PFL_3499 PepSY-associated membrane protein
YP_004107861.1	KEGG: ssl:SS1G_01630 hypothetical protein
YP_004107862.1	KEGG: pfl:PFL_3498 outer membrane ferripyochelin receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor
YP_004107863.1	KEGG: pag:PLES_07001 transcriptional regulator PchR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004107864.1	PFAM: protein of unknown function UPF0060; KEGG: oca:OCAR_5428 membrane protein
YP_004107865.1	TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: bja:blr5747 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_004107866.1	KEGG: bja:bll5746 tRNA/rRNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU)
YP_004107867.1	PFAM: Protein of unknown function DUF2147; KEGG: bbt:BBta_5701 hypothetical protein
YP_004107868.1	KEGG: dge:Dgeo_1718 uracil-DNA glycosylase superfamily protein
YP_004107869.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bja:bll7224 transcription elongation factor regulatory protein
YP_004107870.1	KEGG: bte:BTH_II1885 ImcF-like family protein
YP_004107871.1	KEGG: oca:OCAR_5717 PEP phosphonomutase
YP_004107872.1	KEGG: cak:Caul_0007 putative DNA-binding protein
YP_004107873.1	KEGG: oca:OCAR_5446 hypothetical protein
YP_004107874.1	PFAM: protein of unknown function DUF1476; KEGG: nha:Nham_1632 hypothetical protein
YP_004107875.1	TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: oca:OCAR_5449 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase
YP_004107876.1	KEGG: oca:OCAR_5450 phosphoribosylformylglycinamidine synthase subunit PurS; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS
YP_004107877.1	KEGG: bra:BRADO2778 hypothetical protein
YP_004107878.1	TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: nwi:Nwi_1306 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase
YP_004107879.1	KEGG: bra:BRADO2830 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase-like; fumarate lyase
YP_004107880.1	KEGG: mdo:100022100 similar to plasma phospholipid transfer protein
YP_004107881.1	TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: bja:blr5680 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase
YP_004107882.1	KEGG: bra:BRADO2843 hypothetical protein; PFAM: EF-Hand, Calmodulin; SMART: Calcium-binding EF-hand-containing protein
YP_004107883.1	PFAM: peptidase S58 DmpA; KEGG: nwi:Nwi_2215 peptidase S58, DmpA
YP_004107884.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bja:blr2789 cytochrome c-type biogenesis protein
YP_004107885.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: nha:Nham_1409 excinuclease ABC subunit C
YP_004107886.1	PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_5327 high-affinity branched-chain amino acid ABC transporter (substrate-binding protein)
YP_004107887.1	KEGG: bbt:BBta_5326 high-affinity branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107888.1	KEGG: nwi:Nwi_2211 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107889.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_5324 high-affinity branched-chain amino acid ABC transporter (permease protein)
YP_004107890.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_5323 high-affinity branched-chain amino acid ABC transporter (permease protein)
YP_004107891.1	KEGG: nha:Nham_2610 hypothetical protein
YP_004107892.1	PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bja:bll5666 hypothetical protein
YP_004107893.1	PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bra:BRADO2857 putative carbon-monoxide dehydrogenase small subunit, CoxS-like protein
YP_004107894.1	PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bja:bll5664 putative carbon monoxide dehydrogenase medium subunit
YP_004107895.1	KEGG: bbt:BBta_5316 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_004107896.1	PFAM: VWA containing CoxE family protein; KEGG: bja:bll5662 hypothetical protein
YP_004107897.1	PFAM: protein of unknown function DUF182; KEGG: bja:bll5661 hypothetical protein
YP_004107898.1	KEGG: bbt:BBta_5313 sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis
YP_004107899.1	PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; molybdopterin binding domain; KEGG: bbt:BBta_5312 molybdenum cofactor cytidylyltransferase / molybdopterin molybdochelatase
YP_004107900.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: swi:Swit_2160 LysR family transcriptional regulator
YP_004107901.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sme:SMc01153 enoyl-CoA hydratase
YP_004107902.1	KEGG: bja:bll5657 hypothetical protein
YP_004107904.1	KEGG: bra:BRADO3443 hypothetical protein
YP_004107905.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: fre:Franean1_4360 serine/threonine protein kinase; SMART: GGDEF domain containing protein
YP_004107906.1	PFAM: regulatory protein TetR; KEGG: nha:Nham_0716 TetR family transcriptional regulator
YP_004107907.1	PFAM: secretion protein HlyD family protein; KEGG: bja:bll5650 hypothetical protein
YP_004107908.1	KEGG: bja:bll5649 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107909.1	PFAM: ABC-2 type transporter; KEGG: bbt:BBta_5303 putative ABC transporter (fused ATP-binding and permease components)
YP_004107910.1	KEGG: nha:Nham_2600 hypothetical protein
YP_004107911.1	KEGG: pam:PANA_0485 Tar
YP_004107912.1	PFAM: protein of unknown function DUF72; KEGG: bbt:BBta_5299 hypothetical protein
YP_004107913.1	KEGG: bbt:BBta_5297 putative dolichol-phosphate mannosyltransferase; PFAM: glycosyl transferase family 2; GtrA family protein
YP_004107914.1	KEGG: bja:bll5638 hypothetical protein
YP_004107915.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nha:Nham_2703 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004107916.1	PFAM: PfkB domain protein; KEGG: bra:BRADO2493 putative sugar kinase
YP_004107917.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bra:BRADO2495 putative glyoxalase/bleomycin resistance protein/dioxygenase family protein
YP_004107918.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr2248 hypothetical protein
YP_004107919.1	PFAM: cytochrome P450; KEGG: bja:bll2856 cytochrome P450
YP_004107920.1	PFAM: regulatory protein TetR; KEGG: nha:Nham_2701 TetR family transcriptional regulator
YP_004107921.1	KEGG: nha:Nham_2700 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004107922.1	PFAM: acriflavin resistance protein; KEGG: nwi:Nwi_2283 acriflavin resistance protein
YP_004107923.1	KEGG: nha:Nham_2698 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004107924.1	KEGG: bja:bsr2878 hypothetical protein
YP_004107925.1	KEGG: bja:blr2879 hypothetical protein
YP_004107926.1	KEGG: bbt:BBta_2862 hypothetical protein
YP_004107927.1	TIGRFAM: phasin; KEGG: bra:BRADO2517 hypothetical protein
YP_004107928.1	PFAM: regulatory protein TetR; KEGG: xau:Xaut_0894 TetR family transcriptional regulator
YP_004107929.1	KEGG: bja:blr2891 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein
YP_004107930.1	KEGG: bra:BRADO2520 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B
YP_004107931.1	KEGG: bbt:BBta_2867 phenylacetic acid degradation protein PaaC; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein
YP_004107932.1	KEGG: bbt:BBta_2868 phenylacetic acid degradation protein PaaD; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59
YP_004107933.1	KEGG: bja:blr2895 putative ferredoxin reductase electron transfer component protein; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein
YP_004107934.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: bbt:BBta_2937 hypothetical protein
YP_004107935.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bra:BRADO2592 putative 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), bifunctional protein isomerase/decarboxylase HpcE-like
YP_004107936.1	TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; KEGG: bja:bll2967 putative metapyrocatechase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004107937.1	KEGG: bja:bll2968 NAD-dependent succinate aldehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase
YP_004107938.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bbt:BBta_2940 putative 5-carboxymethyl-2-hydroxymuconate isomerase, HpcD-like protein
YP_004107939.1	TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bja:blr2971 transcriptional regulatory protein; SMART: regulatory protein MarR
YP_004107940.1	PFAM: Malate/L-lactate dehydrogenase; KEGG: bra:BRADO2597 hypothetical protein
YP_004107941.1	KEGG: bph:Bphy_1748 exodeoxyribonuclease V, beta subunit
YP_004107942.1	KEGG: bra:BRADO2598 putative aldolase; PFAM: HpcH/HpaI aldolase
YP_004107943.1	KEGG: jan:Jann_3430 hypothetical protein
YP_004107944.1	KEGG: bbt:BBta_2947 hypothetical protein; PFAM: Protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein
YP_004107945.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; protein of unknown function DUF403; KEGG: bbt:BBta_2948 hypothetical protein
YP_004107946.1	KEGG: bra:BRADO2603 hypothetical protein; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein
YP_004107947.1	PFAM: Cache type 2 domain protein; KEGG: dma:DMR_10750 hypothetical protein
YP_004107948.1	KEGG: oca:OCAR_6729 methyl-accepting chemotaxis receptor/sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004107949.1	KEGG: bja:blr2994 ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit
YP_004107950.1	KEGG: bra:BRADO2623 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004107951.1	KEGG: bja:blr2996 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain
YP_004107952.1	KEGG: nha:Nham_2688 RND superfamily transporter
YP_004107953.1	KEGG: bra:BRADO2625 hypothetical protein
YP_004107954.1	KEGG: oca:OCAR_6662 hypothetical protein
YP_004107955.1	KEGG: bja:blr3001 hypothetical protein; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase
YP_004107956.1	TIGRFAM: squalene synthase HpnD; KEGG: bja:blr3002 putative phytoene synthase; PFAM: Squalene/phytoene synthase
YP_004107957.1	KEGG: bja:blr3003 hypothetical protein; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase
YP_004107958.1	TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; KEGG: bja:blr3004 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase
YP_004107959.1	KEGG: nha:Nham_2681 hypothetical protein; TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1
YP_004107960.1	KEGG: bja:bll3006 hypothetical protein; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein
YP_004107961.1	TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: nwi:Nwi_2266 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein
YP_004107962.1	TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: nwi:Nwi_2265 hypothetical protein
YP_004107963.1	PFAM: aminotransferase class-III; KEGG: bra:BRADO2635 putative aminotransferase; putative ornithine aminotransferase
YP_004107964.1	PFAM: UspA domain protein; KEGG: msl:Msil_1452 UspA domain protein
YP_004107965.1	PFAM: SpoVT/AbrB domain protein; KEGG: bbt:BBta_4599 putative nitrogen regulatory protein
YP_004107966.1	KEGG: bbt:BBta_4600 putative nitrogen regulatory protein (NtrR-like), putative virulence associated protein (vap); manually curated; PFAM: PilT protein domain protein
YP_004107967.1	KEGG: gbe:GbCGDNIH1_1596 hypothetical protein
YP_004107968.1	KEGG: rci:RCIX1317 type I restriction modification system, methyltransferase subunit; PFAM: N-6 DNA methylase
YP_004107969.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: xau:Xaut_3245 glucose-methanol-choline oxidoreductase
YP_004107970.1	TIGRFAM: amidohydrolase; KEGG: nha:Nham_2671 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_004107971.1	KEGG: oca:OCAR_5169 metallophosphoesterase
YP_004107972.1	PFAM: Carbohydrate-selective porin OprB; KEGG: bbt:BBta_3415 putative outer membrane protein of unknown function
YP_004107973.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: bra:BRADO6358 putative divalent cation transporter, CorA-like
YP_004107974.1	PFAM: protein of unknown function DUF892; KEGG: nha:Nham_2670 hypothetical protein
YP_004107975.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7829 hypothetical protein
YP_004107976.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7827 ABC transporter substrate-binding protein
YP_004107977.1	PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_7080 branched chain amino acid ABC transporter periplasmic-binding protein
YP_004107978.1	PFAM: inner-membrane translocator; KEGG: bra:BRADO0976 high-affinity branched-chain amino acid ABC transporter permease
YP_004107979.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_7078 putative high-affinity branched-chain amino acid transport system permease protein LivH
YP_004107980.1	KEGG: bja:blr7824 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107981.1	KEGG: bja:blr7823 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004107982.1	KEGG: bja:blr7822 transcriptional regulatory protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR
YP_004107983.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bja:bll7821 fatty oxidation complex alpha subunit
YP_004107984.1	KEGG: bra:BRADO0982 putative long-chain-fatty-acid--CoA ligase; putative long-chain acyl-CoA synthetase; pimeloyl-CoA ligase PimA; TIGRFAM: dicarboxylate/CoA ligase PimA; PFAM: AMP-dependent synthetase and ligase
YP_004107985.1	TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bbt:BBta_7072 acetyl-CoA acetyltransferase; PFAM: Thiolase-like
YP_004107986.1	KEGG: bra:BRADO0984 putative acyl-CoA dehydrogenase; pimeloyl-CoA dehydrogenase PimC (large subunit); TIGRFAM: pimeloyl-CoA dehydrogenase, large subunit; PFAM: acyl-CoA dehydrogenase domain protein
YP_004107987.1	KEGG: bra:BRADO0985 putative acyl-CoA dehydrogenase; pimeloyl-CoA dehydrogenase PimD (small subunit); TIGRFAM: pimeloyl-CoA dehydrogenase, small subunit; PFAM: acyl-CoA dehydrogenase domain protein
YP_004107988.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_7068 SDR family dehydrogenase/reductase
YP_004107989.1	PFAM: FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bra:BRADO3794 sulfite reductase
YP_004107990.1	KEGG: bra:BRADO3793 ferredoxin-nitrite reductase; TIGRFAM: precorrin-3B synthase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein
YP_004107991.1	PFAM: globin; KEGG: azc:AZC_0683 putative hemoprotein
YP_004107992.1	PFAM: globin; KEGG: bbt:BBta_3847 putative globin-like protein
YP_004107993.1	KEGG: bja:bll4572 putative nitrate transport protein
YP_004107994.1	KEGG: nwi:Nwi_1288 hypothetical protein
YP_004107995.1	PFAM: ANTAR domain protein; response regulator receiver; KEGG: bja:bll4573 two-component response regulator
YP_004107996.1	KEGG: bbt:BBta_7067 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like
YP_004107997.1	KEGG: spe:Spro_4104 hypothetical protein
YP_004107998.1	KEGG: tgr:Tgr7_2980 hypothetical protein
YP_004107999.1	PFAM: Glutathione S-transferase domain; KEGG: bja:blr1415 glutathione S-transferase-like protein
YP_004108000.1	KEGG: bra:BRADO0994 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region
YP_004108001.1	KEGG: spe:Spro_1572 hypothetical protein
YP_004108002.1	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: bbt:BBta_7060 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_004108003.1	KEGG: bja:blr1420 flavin dependant oxidoreductase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup
YP_004108004.1	KEGG: bbt:BBta_7058 prephenate dehydratase; PFAM: prephenate dehydratase
YP_004108005.1	TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: nha:Nham_0376 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase
YP_004108006.1	PFAM: cytochrome c class I; KEGG: bja:blr1423 cytochrome c
YP_004108007.1	PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_7055 oligopeptide ABC transporter periplasmic substrate-binding protein
YP_004108008.1	PFAM: extracellular solute-binding protein family 5; KEGG: nha:Nham_0379 extracellular solute-binding protein
YP_004108009.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nha:Nham_0380 binding-protein-dependent transport systems inner membrane component
YP_004108010.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nwi:Nwi_0291 binding-protein dependent transport system inner membrane protein
YP_004108011.1	KEGG: nwi:Nwi_0292 ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_004108012.1	PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2637 NUDIX hydrolase
YP_004108013.1	PFAM: NLP/P60 protein; KEGG: bbt:BBta_7040 NLP/P60 family protein
YP_004108014.1	KEGG: nha:Nham_0384 leucyl aminopeptidase; manually curated; PFAM: peptidase M17 leucyl aminopeptidase domain protein
YP_004108015.1	KEGG: nha:Nham_0385 tetratricopeptide TPR_2
YP_004108016.1	PFAM: Type II secretion system F domain; KEGG: nha:Nham_0386 type II secretion system protein
YP_004108017.1	PFAM: Type II secretion system F domain; KEGG: bra:BRADO1015 putative pilus assembly protein; putative membrane protein
YP_004108018.1	PFAM: type II secretion system protein E; KEGG: bja:bll1436 pilus assembly protein
YP_004108019.1	KEGG: bra:BRADO1017 putative pilus assembly protein CpaE
YP_004108020.1	KEGG: nha:Nham_0390 pilus assembly protein CpaD; TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: Pilus biogenesis CpaD-related
YP_004108021.1	PFAM: type II and III secretion system protein; transport-associated; KEGG: nha:Nham_0391 type II and III secretion system protein
YP_004108022.1	KEGG: nha:Nham_0392 Flp pilus assembly CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein
YP_004108023.1	PFAM: peptidase A24A prepilin type IV; KEGG: nha:Nham_0393 peptidase A24A, prepilin type IV
YP_004108024.1	PFAM: Flp/Fap pilin component; KEGG: bbt:BBta_7028 putative Flp/Fap pilin component
YP_004108025.1	KEGG: nwi:Nwi_0305 hypothetical protein
YP_004108026.1	PFAM: TadE family protein; KEGG: bbt:BBta_7024 hypothetical protein
YP_004108027.1	PFAM: TadE family protein; KEGG: bbt:BBta_7023 hypothetical protein
YP_004108028.1	KEGG: bbt:BBta_7022 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_004108029.1	KEGG: nwi:Nwi_0312 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein
YP_004108030.1	KEGG: nha:Nham_0400 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_004108031.1	TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bra:BRADO1031 branched chain amino-acid ABC transporter substrate-binding protein
YP_004108032.1	KEGG: bja:blr1449 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator
YP_004108033.1	KEGG: bja:blr1450 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator
YP_004108034.1	TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bbt:BBta_7015 putative branched-chain amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase
YP_004108035.1	TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: bbt:BBta_7014 putative branched-chain amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase
YP_004108036.1	PFAM: Urease accessory protein UreD; KEGG: bja:blr1453 urease accessory protein
YP_004108037.1	TIGRFAM: urease, gamma subunit; KEGG: sme:SMc01941 urease subunit gamma; PFAM: Urease gamma subunit region
YP_004108038.1	TIGRFAM: urease, beta subunit; KEGG: bbt:BBta_7011 urease subunit beta; PFAM: Urease beta subunit
YP_004108039.1	TIGRFAM: urease, alpha subunit; KEGG: bja:blr1457 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein
YP_004108040.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bja:bsr1458 hypothetical protein
YP_004108041.1	PFAM: UreE urease accessory domain protein; KEGG: bra:BRADO1043 urease accessory protein UreE
YP_004108042.1	PFAM: Urease accessory protein UreF; KEGG: bja:blr1459 urease accessory protein
YP_004108043.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll1329 acyl-CoA synthetase
YP_004108044.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: bja:blr1330 hypothetical protein
YP_004108045.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bja:blr2780 NAD-dependent alcohol dehydrogenase
YP_004108046.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: mes:Meso_2432 molybdopterin-guanine dinucleotide biosynthesis protein A
YP_004108047.1	PFAM: SirA family protein; KEGG: bja:bsr2313 hypothetical protein
YP_004108048.1	KEGG: oca:OCAR_4053 hypothetical protein
YP_004108049.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: met:M446_5547 transposase IS116/IS110/IS902 family protein
YP_004108050.1	TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bja:blr6774 hypothetical protein; SMART: Ku domain protein
YP_004108051.1	KEGG: bja:bll6773 ATP-dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA primase small subunit
YP_004108052.1	KEGG: nha:Nham_2869 hypothetical protein
YP_004108053.1	KEGG: bbt:BBta_6327 hypothetical protein
YP_004108054.1	SMART: alpha amylase catalytic sub domain; TIGRFAM: malto-oligosyltrehalose synthase; KEGG: bra:BRADO5820 putative glycosyl hydrolase (glycosidase); PFAM: alpha amylase catalytic region
YP_004108055.1	TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: bbt:BBta_6325 putative maltooligosyltrehalose trehalohydrolase; SMART: alpha amylase catalytic sub domain
YP_004108056.1	TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: bja:blr6769 glycogen debranching enzyme; SMART: alpha amylase catalytic sub domain
YP_004108057.1	TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: bja:blr6768 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain
YP_004108058.1	TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; aminoglycoside phosphotransferase; KEGG: bja:blr6767 trehalose synthase; SMART: alpha amylase catalytic sub domain
YP_004108059.1	KEGG: nha:Nham_1466 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_004108060.1	TIGRFAM: 4-alpha-glucanotransferase; KEGG: bra:BRADO5815 putative 4-alpha-glucanotransferase (MalQ-like); PFAM: glycoside hydrolase family 77
YP_004108061.1	PFAM: glycoside hydrolase 15-related; KEGG: bja:bll6764 hypothetical protein
YP_004108062.1	KEGG: bja:blr6763 hypothetical protein; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3
YP_004108063.1	TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: bra:BRADO5812 putative bifunctional: 6-phosphogluconolactonase (N-terminal) (Pgl); D-gluconate kinase (C-terminal); PFAM: shikimate kinase
YP_004108064.1	KEGG: bja:blr6761 putative 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase
YP_004108065.1	TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: bbt:BBta_6317 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase
YP_004108066.1	KEGG: bbt:BBta_6316 6-phosphogluconate dehydrogenase-like protein; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein
YP_004108067.1	KEGG: bja:blr6758 bifunctional transaldolase/phosoglucose isomerase; TIGRFAM: transaldolase; PFAM: Transaldolase; phosphoglucose isomerase (PGI)
YP_004108068.1	KEGG: bbt:BBta_6305 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold
YP_004108069.1	KEGG: nha:Nham_3268 hypothetical protein
YP_004108070.1	PFAM: Amidase; KEGG: bja:bll6733 amidase
YP_004108071.1	KEGG: bra:BRADO5788 glutathione peroxidase; PFAM: glutathione peroxidase
YP_004108072.1	PFAM: Protein of unknown function DUF3297; KEGG: bra:BRADO5787 hypothetical protein
YP_004108073.1	PFAM: Excinuclease ABC C subunit domain protein; KEGG: oca:OCAR_7056 excinuclease ABC, C subunit domain protein
YP_004108074.1	KEGG: nha:Nham_2920 hypothetical protein
YP_004108075.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bra:BRADO5762 putative gluconolactonase
YP_004108076.1	PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_2919 GCN5-related N-acetyltransferase
YP_004108077.1	KEGG: nfi:NFIA_062490 cytochrome P450 monooxygenase (Fum15), putative
YP_004108078.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bja:blr2392 putative dioxygenase subunit
YP_004108079.1	KEGG: bja:blr2391 transcriptional regulatory protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004108080.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:blr2390 vanillate O-demethylase oxygenase subunit
YP_004108081.1	PFAM: Protein of unknown function DUF1963; KEGG: btk:BT9727_1822 hypothetical protein
YP_004108082.1	KEGG: bbt:BBta_6260 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase
YP_004108083.1	PFAM: Transglycosylase-associated protein; KEGG: nha:Nham_2918 transglycosylase-associated protein
YP_004108084.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: bja:bll1362 hypothetical protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_004108085.1	KEGG: bra:BRADO5746 hypothetical protein
YP_004108086.1	KEGG: bbt:BBta_6257 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_004108087.1	KEGG: nha:Nham_2916 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_004108088.1	KEGG: nwi:Nwi_2489 hypothetical protein
YP_004108089.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:bll6688 hypothetical protein
YP_004108090.1	KEGG: bja:bsr6686 hypothetical protein
YP_004108091.1	KEGG: gsu:GSU0709 hypothetical protein; manually curated; PFAM: KAP P-loop domain protein
YP_004108092.1	KEGG: bbt:BBta_6251 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004108093.1	PFAM: PilT protein domain protein; KEGG: rhi:NGR_b23580 putative nucleic acid-binding protein
YP_004108094.1	KEGG: sme:SMc02658 hypothetical protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein
YP_004108095.1	KEGG: nha:Nham_2909 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 11
YP_004108096.1	PFAM: conserved hypothetical protein; KEGG: oca:OCAR_7046 hypothetical protein
YP_004108097.1	KEGG: bja:bll6684 transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein
YP_004108098.1	KEGG: nha:Nham_2906 hypothetical protein
YP_004108099.1	KEGG: bja:blr6682 hypothetical protein
YP_004108100.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bbt:BBta_6243 putative bacterioferritin-associated ferredoxin
YP_004108101.1	KEGG: xau:Xaut_3765 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein
YP_004108102.1	KEGG: geo:Geob_1855 hypothetical protein
YP_004108103.1	KEGG: bbt:BBta_2901 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer
YP_004108104.1	PFAM: SOUL heme-binding protein; KEGG: mrd:Mrad2831_4266 SOUL heme-binding protein
YP_004108105.1	manually curated; KEGG: bbt:BBta_6234 putative collagen-like protein
YP_004108106.1	KEGG: rrs:RoseRS_3378 protein kinase
YP_004108107.1	KEGG: sro:Sros_5931 hypothetical protein
YP_004108108.1	KEGG: nwi:Nwi_2469 hypothetical protein
YP_004108109.1	KEGG: nha:Nham_2898 hypothetical protein
YP_004108110.1	KEGG: bvi:Bcep1808_5397 L-carnitine dehydratase/bile acid-inducible protein F
YP_004108111.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bbt:BBta_7587 hypothetical protein
YP_004108113.1	KEGG: bcy:Bcer98_0238 alanine racemase
YP_004108114.1	KEGG: saq:Sare_0277 amino acid permease-associated region
YP_004108115.1	KEGG: met:M446_2033 methyltransferase type 11
YP_004108116.1	KEGG: dal:Dalk_1505 von Willebrand factor type A
YP_004108117.1	KEGG: psa:PST_1052 transposase and inactivated derivative
YP_004108118.1	KEGG: rlg:Rleg_2764 hypothetical protein
YP_004108119.1	PFAM: Protein of unknown function DUF1778; KEGG: bid:Bind_1482 hypothetical protein
YP_004108120.1	manually curated; KEGG: mpo:Mpop_1352 hypothetical protein
YP_004108121.1	PFAM: protein of unknown function DUF1486; KEGG: bph:Bphy_5476 hypothetical protein
YP_004108122.1	KEGG: pbe:PB000972.03.0 hypothetical protein
YP_004108123.1	manually curated; KEGG: bja:bll7219 hypothetical protein
YP_004108124.1	KEGG: bbt:BBta_6226 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC
YP_004108125.1	KEGG: nwi:Nwi_2467 thiamine monophosphate synthase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase
YP_004108126.1	PFAM: thiazole biosynthesis family protein; KEGG: bbt:BBta_6224 thiazole synthase
YP_004108127.1	KEGG: bbt:BBta_6223 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein
YP_004108128.1	PFAM: FAD dependent oxidoreductase; KEGG: bja:blr6655 thiamine biosynthesis oxidoreductase
YP_004108129.1	KEGG: bbt:BBta_6217 putative two component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein
YP_004108130.1	KEGG: bbt:BBta_6216 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004108131.1	KEGG: bja:bll6650 hypothetical protein
YP_004108132.1	PFAM: PRC-barrel domain protein; KEGG: bbt:BBta_6218 hypothetical protein
YP_004108133.1	KEGG: nha:Nham_2886 hypothetical protein
YP_004108134.1	KEGG: stp:Strop_3754 peptidase S8/S53 subtilisin kexin sedolisin
YP_004108135.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr6636 ATP synthase subunit
YP_004108136.1	KEGG: tmz:Tmz1t_1789 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_004108137.1	KEGG: bbt:BBta_2412 hypothetical protein
YP_004108138.1	PFAM: Methyltransferase type 11; KEGG: sus:Acid_4410 arsenite S-adenosylmethyltransferase
YP_004108139.1	KEGG: sus:Acid_4411 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein Crp
YP_004108140.1	KEGG: xau:Xaut_3418 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004108141.1	PFAM: permease; KEGG: xau:Xaut_3419 permease
YP_004108142.1	KEGG: xau:Xaut_3943 thiol-disulfide isomerase and thioredoxin
YP_004108143.1	SMART: regulatory protein ArsR; KEGG: oca:OCAR_4233 transcriptional regulator, ArsR family
YP_004108144.1	KEGG: oca:OCAR_7747 transcriptional regulator, ArsR family; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_004108145.1	KEGG: oca:OCAR_4231 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related
YP_004108146.1	KEGG: oca:OCAR_4230 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter
YP_004108147.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azl:AZL_b01550 3-oxoacyl-[acyl-carrier-protein] reductase
YP_004108148.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sus:Acid_2708 short chain dehydrogenase
YP_004108149.1	KEGG: dol:Dole_1742 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004108150.1	KEGG: bja:bll0962 phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004108151.1	KEGG: nha:Nham_3087 outer membrane autotransporter barrel; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; polymorphic outer membrane protein; PFAM: Autotransporter beta- domain protein
YP_004108152.1	KEGG: mdo:100013455 similar to organic anion transporter 4
YP_004108153.1	KEGG: bra:BRADO0729 putative methyl-accepting chemotaxis protein (chemoreceptor); PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004108154.1	PFAM: Extensin family protein; KEGG: bja:bll6625 hypothetical protein
YP_004108155.1	PFAM: regulatory protein TetR; KEGG: bja:blr6623 transcriptional regulatory protein
YP_004108156.1	PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_6188 putative multidrug resistance protein A
YP_004108157.1	KEGG: bbt:BBta_6187 putative multidrug resistance protein B; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1
YP_004108158.1	KEGG: gme:Gmet_2012 polysaccharide biosynthesis protein
YP_004108159.1	KEGG: bja:blr6611 amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2
YP_004108160.1	KEGG: bbt:BBta_6182 S-adenosyl-dependent methyl transferase; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase
YP_004108161.1	KEGG: nwi:Nwi_1044 hypothetical protein
YP_004108162.1	KEGG: nha:Nham_1273 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain
YP_004108163.1	KEGG: nha:Nham_1274 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_004108164.1	KEGG: nha:Nham_1275 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_004108165.1	KEGG: nha:Nham_1276 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
YP_004108166.1	KEGG: nha:Nham_1277 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein
YP_004108167.1	KEGG: bja:bll6603 cell division protein; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein
YP_004108168.1	KEGG: nwi:Nwi_1051 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28
YP_004108169.1	KEGG: nha:Nham_1280 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein
YP_004108170.1	KEGG: cyc:PCC7424_4025 hypothetical protein
YP_004108171.1	TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: nwi:Nwi_1054 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein
YP_004108172.1	KEGG: oca:OCAR_5246 hypothetical protein
YP_004108173.1	KEGG: mxa:MXAN_0277 hypothetical protein
YP_004108174.1	KEGG: nwi:Nwi_1055 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein
YP_004108175.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: bja:bll6598 putative cell division protein
YP_004108176.1	KEGG: bra:BRADO5654 cell division protein ATPase; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA
YP_004108177.1	KEGG: nha:Nham_1286 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain
YP_004108178.1	KEGG: bja:bll6595 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase
YP_004108179.1	KEGG: bbt:BBta_6164 hypothetical protein; manually curated; TIGRFAM: outer membrane assembly lipoprotein YfiO
YP_004108180.1	KEGG: nha:Nham_1289 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein
YP_004108181.1	KEGG: bja:bsr6592 hypothetical protein; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein
YP_004108182.1	SMART: NAD-dependent DNA ligase ; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: nha:Nham_1290 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; BRCT domain protein
YP_004108183.1	KEGG: bja:blr6590 major facilitator superfamily transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1
YP_004108184.1	PFAM: peptidase M24; creatinase; KEGG: bbt:BBta_6160 putative aminopeptidase P
YP_004108185.1	KEGG: bra:BRADO5645 hypothetical protein
YP_004108186.1	PFAM: ribosomal L11 methyltransferase; KEGG: nha:Nham_2746 ribosomal L11 methyltransferase
YP_004108187.1	KEGG: sgr:SGR_3600 hypothetical protein
YP_004108188.1	PFAM: FAD dependent oxidoreductase; KEGG: bja:blr6586 phytoene dehydrogenase
YP_004108189.1	KEGG: bra:BRADO5641 hypothetical protein
YP_004108190.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_2743 ErfK/YbiS/YcfS/YnhG
YP_004108191.1	KEGG: bja:bll6580 hypothetical protein
YP_004108192.1	PFAM: ABC-2 type transporter; KEGG: nha:Nham_2741 hypothetical protein
YP_004108193.1	KEGG: bbt:BBta_6149 putative ABC transporter (ATP binding protein); PFAM: ABC transporter related; SMART: AAA ATPase
YP_004108194.1	PFAM: protein of unknown function UPF0150; KEGG: nha:Nham_0567 hypothetical protein
YP_004108195.1	PFAM: UvrD/REP helicase; KEGG: nha:Nham_2739 UvrD/REP helicase
YP_004108196.1	PFAM: protein of unknown function DUF1328; KEGG: bbt:BBta_6140 hypothetical protein
YP_004108197.1	KEGG: bra:BRADO5610 hypothetical protein
YP_004108198.1	PFAM: FAD linked oxidase domain protein; KEGG: bja:bll6558 oxidoreductase
YP_004108199.1	PFAM: AsmA family protein; KEGG: bja:bll6536 hypothetical protein
YP_004108200.1	KEGG: nha:Nham_2734 hypothetical protein
YP_004108201.1	manually curated; KEGG: bbt:BBta_6107 hypothetical protein
YP_004108202.1	KEGG: nha:Nham_2732 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like
YP_004108203.1	KEGG: bbt:BBta_6105 hypothetical protein
YP_004108204.1	PFAM: Chromate transporter; KEGG: bra:BRADO5582 putative chromate transport protein (ChrA-like)
YP_004108205.1	PFAM: Chromate transporter; KEGG: bja:bll6516 putative transmembrane protein
YP_004108206.1	KEGG: bra:BRADO5580 hypothetical protein
YP_004108207.1	PFAM: protein of unknown function DUF112 transmembrane; KEGG: bja:bll6514 hypothetical protein
YP_004108208.1	PFAM: conserved hypothetical protein; KEGG: bja:bll6513 hypothetical protein
YP_004108209.1	TIGRFAM: thymidylate synthase; KEGG: rsh:Rsph17029_2044 thymidylate synthase; PFAM: thymidylate synthase
YP_004108211.1	KEGG: bja:bll6510 dihydrofolate reductase; PFAM: dihydrofolate reductase region
YP_004108212.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: oca:OCAR_5278 HflK protein; SMART: band 7 protein
YP_004108213.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: oca:OCAR_5279 HflC protein; SMART: band 7 protein
YP_004108214.1	PFAM: Protein of unknown function DUF2065; KEGG: bja:bsl6507 hypothetical protein
YP_004108215.1	SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bbt:BBta_6094 putative serine protease do-like precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_004108216.1	PFAM: protein of unknown function DUF548; KEGG: atc:AGR_L_1626 hypothetical protein
YP_004108217.1	PFAM: Extracellular solute-binding protein, family 7; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: hch:HCH_00744 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component
YP_004108218.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aco:Amico_0458 tripartite ATP-independent periplasmic transporter DctQ component
YP_004108219.1	KEGG: aco:Amico_0459 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004108220.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_3863 formyl-CoA transferase
YP_004108221.1	PFAM: DNA polymerase beta domain protein region; KEGG: lch:Lcho_3353 DNA polymerase beta subunit
YP_004108222.1	KEGG: aat:D11S_0470 HI0074 family nucleotidyltransferase substrate binding protein; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074
YP_004108224.1	PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein
YP_004108225.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mdi:METDI0840 putative phage integrase
YP_004108226.1	KEGG: apb:SAR116_0394 possible DNA-dependent RNA polymerase
YP_004108227.1	KEGG: bvi:Bcep1808_5579 amidase
YP_004108228.1	PFAM: Resolvase domain; KEGG: met:M446_1223 resolvase domain-containing protein
YP_004108230.1	KEGG: bja:bll3892 hypothetical protein
YP_004108232.1	KEGG: ote:Oter_1689 cell wall surface anchor family protein
YP_004108233.1	KEGG: hypothetical protein
YP_004108234.1	PFAM: SpoVT/AbrB domain protein; KEGG: alv:Alvin_0249 transcriptional regulator/antitoxin, MazE
YP_004108235.1	PFAM: PilT protein domain protein; KEGG: nmu:Nmul_A0984 PilT protein-like
YP_004108236.1	PFAM: acriflavin resistance protein; KEGG: nha:Nham_1509 acriflavin resistance protein
YP_004108237.1	KEGG: nha:Nham_1510 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004108238.1	KEGG: bbt:BBta_3539 hypothetical protein
YP_004108239.1	KEGG: nha:Nham_1513 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor
YP_004108240.1	KEGG: bja:blr3905 putative hydroxylase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit
YP_004108241.1	KEGG: bja:blr3906 biopolymer transport protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel
YP_004108242.1	KEGG: nha:Nham_1516 biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR
YP_004108243.1	TIGRFAM: TonB family protein; KEGG: nwi:Nwi_2307 TonB like protein
YP_004108244.1	KEGG: abo:ABO_2675 hypothetical protein
YP_004108245.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_3549 3-oxoacyl-acyl carrier protein reductase
YP_004108246.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO3102 putative 3-oxoacyl-[acyl-carrier-protein] reductase
YP_004108247.1	KEGG: bbt:BBta_3551 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_004108248.1	KEGG: bra:BRADO3105 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_004108249.1	PFAM: extracellular solute-binding protein family 1; KEGG: bra:BRADO3106 putative ABC transporter periplasmic-binding protein
YP_004108250.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_3555 putative ABC transporter permease protein
YP_004108251.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_3556 putative ABC transporter permease protein
YP_004108252.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: bra:BRADO3109 putative UDP-glucose 4-epimerase
YP_004108253.1	PFAM: Thiolase-like; KEGG: bra:BRADO3110 acetyl-CoA acetyltransferase
YP_004108254.1	PFAM: AMP-dependent synthetase and ligase; KEGG: dsh:Dshi_0700 AMP-dependent synthetase and ligase
YP_004108255.1	KEGG: svi:Svir_38940 acyl dehydratase
YP_004108256.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbt:BBta_3565 putative formyl-CoA transferase
YP_004108257.1	KEGG: bbt:BBta_3567 putative thiolase
YP_004108258.1	PFAM: protein of unknown function DUF35; KEGG: bja:blr3928 hypothetical protein
YP_004108259.1	KEGG: nmu:Nmul_A1418 hypothetical protein
YP_004108260.1	KEGG: bja:bll3936 hypothetical protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004108261.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:bll3937 hypothetical protein
YP_004108262.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bja:bsl3938 putative biotinylated protein
YP_004108263.1	KEGG: bbt:BBta_3572 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR
YP_004108264.1	KEGG: bja:blr3940 putative propionyl-CoA carboxylase beta chain; manually curated; PFAM: carboxyl transferase
YP_004108265.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll3948 monocarboxylate MFS permease
YP_004108266.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_3576 enoyl-CoA hydratase
YP_004108267.1	PFAM: thioesterase superfamily protein; KEGG: bja:blr3951 hypothetical protein
YP_004108268.1	PFAM: regulatory protein TetR; KEGG: bbt:BBta_3577 TetR family transcriptional regulator
YP_004108269.1	KEGG: bra:BRADO3137 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase
YP_004108270.1	KEGG: xau:Xaut_2192 hypothetical protein
YP_004108271.1	manually curated; KEGG: xau:Xaut_2191 PilT domain-containing protein
YP_004108272.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nha:Nham_2558 acyl-CoA dehydrogenase-like
YP_004108273.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO3139 enoyl-CoA hydratase
YP_004108274.1	KEGG: bbt:BBta_3581 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding
YP_004108275.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr3958 putative acetyl-coenzyme A synthetase
YP_004108276.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr5604 enoyl-CoA hydratase
YP_004108277.1	PFAM: Amidase; KEGG: bja:blr5603 amidase
YP_004108278.1	TIGRFAM: amidohydrolase; KEGG: bbt:BBta_5260 putative amidohydrolase family protein; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_004108279.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: ara:Arad_7796 hypothetical protein
YP_004108280.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: bbt:BBta_p0025 putative cAMP-induced filamentation protein
YP_004108281.1	manually curated; KEGG: smd:Smed_5453 hypothetical protein
YP_004108282.1	PFAM: Domain of unknown function DUF1814; KEGG: smd:Smed_5454 hypothetical protein
YP_004108283.1	KEGG: cce:Ccel_0516 hypothetical protein
YP_004108284.1	PFAM: protein of unknown function DUF23; KEGG: nha:Nham_1056 hypothetical protein
YP_004108285.1	PFAM: UspA domain protein; KEGG: app:CAP2UW1_0552 UspA domain protein
YP_004108286.1	KEGG: bra:BRADO2934 putative signal peptide
YP_004108287.1	PFAM: amine oxidase; KEGG: bbt:BBta_5237 putative salicylate 1-monooxygenase
YP_004108288.1	KEGG: bja:bsr5590 hypothetical protein
YP_004108289.1	KEGG: bbt:BBta_5235 hypothetical protein
YP_004108290.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:bll5588 hypothetical protein
YP_004108291.1	KEGG: bbt:BBta_5231 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein
YP_004108292.1	KEGG: nha:Nham_2578 hypothetical protein
YP_004108293.1	KEGG: bra:BRADO2942 hypothetical protein
YP_004108294.1	KEGG: nwi:Nwi_2173 hypothetical protein
YP_004108295.1	KEGG: nha:Nham_2575 carbonic anhydrase
YP_004108296.1	manually curated; KEGG: bra:BRADO2945 hypothetical protein
YP_004108297.1	KEGG: bja:blr5580 hypothetical protein
YP_004108298.1	PFAM: porin; KEGG: bbt:BBta_3063 porin precursor domain-containing protein
YP_004108299.1	KEGG: bja:blr4984 transcriptional regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004108300.1	KEGG: tet:TTHERM_00998850 hypothetical protein
YP_004108301.1	KEGG: bbt:BBta_3101 hypothetical protein
YP_004108302.1	KEGG: bja:blr0365 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21
YP_004108303.1	KEGG: bbt:BBta_2403 hypothetical protein
YP_004108304.1	KEGG: bbt:BBta_5218 hypothetical protein
YP_004108305.1	PFAM: type IV pilus assembly PilZ; KEGG: bja:blr5568 hypothetical protein
YP_004108306.1	KEGG: bja:blr0395 hypothetical protein
YP_004108307.1	PFAM: protein of unknown function DUF1457; KEGG: nha:Nham_1646 hypothetical protein
YP_004108308.1	PFAM: Rhomboid family protein; KEGG: nha:Nham_1648 rhomboid-like protein
YP_004108309.1	KEGG: bja:bll5551 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein
YP_004108310.1	PFAM: regulatory protein TetR; KEGG: bbt:BBta_7041 TetR family transcriptional regulator
YP_004108311.1	KEGG: bbt:BBta_7043 putative uncharacterized iron-regulated membrane protein
YP_004108312.1	KEGG: apt:APA01_13520 hypothetical protein
YP_004108313.1	PFAM: Patatin; KEGG: nha:Nham_1650 patatin
YP_004108314.1	KEGG: nha:Nham_1651 hypothetical protein
YP_004108315.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bja:bll5542 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_004108316.1	PFAM: nitroreductase; KEGG: bja:blr5540 hypothetical protein
YP_004108317.1	KEGG: oca:OCAR_5107 hypothetical protein
YP_004108318.1	KEGG: neu:NE1587 helix-hairpin-helix DNA-binding motif-containing protein
YP_004108319.1	KEGG: bra:BRADO2971 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain protein; Anticodon-binding domain protein
YP_004108320.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll5536 major facilitator superfamily transporter
YP_004108321.1	KEGG: clo:HMPREF0868_0929 hypothetical protein
YP_004108322.1	PFAM: O-methyltransferase family 3; KEGG: bte:BTH_II0913 O-methyltransferase
YP_004108323.1	PFAM: regulatory protein TetR; KEGG: bja:blr4230 transcriptional regulatory protein
YP_004108324.1	KEGG: cak:Caul_4714 hypothetical protein
YP_004108325.1	KEGG: sak:SAK_0962 TenA/THI-4 family protein
YP_004108326.1	KEGG: bbt:BBta_7551 hypothetical protein
YP_004108327.1	KEGG: nwi:Nwi_2375 cold-shock protein, DNA-binding; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_004108328.1	PFAM: Citrate transporter; KEGG: bra:BRADO3240 putative arsenite permease
YP_004108329.1	KEGG: bra:BRADO3451 putative signal peptide
YP_004108330.1	PFAM: protein of unknown function DUF37; KEGG: bja:blr5525 hypothetical protein
YP_004108331.1	KEGG: nha:Nham_1655 hypothetical protein
YP_004108332.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: bra:BRADO2983 hypothetical protein
YP_004108333.1	TIGRFAM: GTP cyclohydrolase I; KEGG: bja:bll5522 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_004108334.1	manually curated; KEGG: nha:Nham_1658 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase
YP_004108335.1	KEGG: mpo:Mpop_3241 hypothetical protein
YP_004108336.1	PFAM: Lytic transglycosylase catalytic; KEGG: bja:bll5520 hypothetical protein
YP_004108337.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpo:Mpop_1559 transcriptional regulator, LysR family
YP_004108338.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: azc:AZC_3883 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004108339.1	KEGG: mpo:Mpop_3784 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004108340.1	KEGG: bav:BAV2580 ABC transporter, substrate binding protein
YP_004108341.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pnu:Pnuc_1186 binding-protein-dependent transport systems inner membrane component
YP_004108342.1	PFAM: Protein of unknown function DUF2336; KEGG: bja:bll5519 hypothetical protein
YP_004108343.1	PFAM: Hpt domain protein; KEGG: bja:blr5518 hypothetical protein
YP_004108344.1	KEGG: bja:blr5517 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004108345.1	KEGG: mpd:MCP_2871 hypothetical protein
YP_004108347.1	PFAM: ATP-NAD/AcoX kinase; KEGG: nha:Nham_1663 inorganic polyphosphate/ATP-NAD kinase
YP_004108348.1	KEGG: nha:Nham_1665 hypothetical protein
YP_004108349.1	KEGG: nha:Nham_1666 OmpA-like transmembrane region
YP_004108351.1	KEGG: hvo:HVO_A0154 sodium/solute symporter
YP_004108352.1	KEGG: pcs:Pc12g05190 Pc12g05190
YP_004108353.1	KEGG: bja:bll4036 hypothetical protein
YP_004108354.1	PFAM: BLUF domain protein; KEGG: met:M446_1828 BLUF domain-containing protein
YP_004108355.1	KEGG: ilo:IL1489 hypothetical protein
YP_004108356.1	KEGG: syf:Synpcc7942_1587 integral membrane protein-like; manually curated; PFAM: protein of unknown function DUF1036
YP_004108357.1	KEGG: lma:L5683.01 hypothetical protein
YP_004108358.1	KEGG: bgl:bglu_2g14830 hypothetical protein
YP_004108359.1	KEGG: oca:OCAR_5638 hypothetical protein
YP_004108360.1	KEGG: nha:Nham_2509 hypothetical protein
YP_004108361.1	KEGG: nha:Nham_2508 RNA methyltransferase TrmH, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding
YP_004108362.1	KEGG: bbt:BBta_1063 hypothetical protein
YP_004108363.1	KEGG: bbt:BBta_1027 hypothetical protein
YP_004108364.1	PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bbt:BBta_1028 putative capsule polysaccharide export outer membrane protein
YP_004108365.1	PFAM: O-antigen polymerase; KEGG: bbt:BBta_1029 putative O-antigen polymerase, putative membrane protein
YP_004108366.1	KEGG: bbt:BBta_1030 hypothetical protein
YP_004108367.1	KEGG: mav:MAV_0960 hypothetical protein
YP_004108368.1	KEGG: bra:BRADO4757 exopolysaccharide production protein ExoY; PFAM: sugar transferase
YP_004108369.1	KEGG: bbt:BBta_1033 hypothetical protein
YP_004108370.1	KEGG: bbt:BBta_1034 putative tyrosine-protein kinase injvolved in exopolysaccharide polymerization; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein
YP_004108371.1	KEGG: bbt:BBta_1035 hypothetical protein
YP_004108372.1	PFAM: metallophosphoesterase; KEGG: bbt:BBta_1036 putative serine/threonine protein phosphatase
YP_004108373.1	PFAM: glycosyl transferase group 1; KEGG: bbt:BBta_1037 putative glycosyltransferase group 1 family protein
YP_004108374.1	PFAM: glycosyl transferase family 25; KEGG: mpt:Mpe_A0728 glycosyltransferase involved in LPS biosynthesis-like protein
YP_004108375.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mes:Meso_2584 DegT/DnrJ/EryC1/StrS aminotransferase
YP_004108376.1	PFAM: acyltransferase 3; KEGG: xau:Xaut_4681 acyltransferase 3
YP_004108377.1	PFAM: polysaccharide biosynthesis protein; KEGG: bbt:BBta_1044 hypothetical protein
YP_004108378.1	PFAM: glycosyl transferase family 2; KEGG: family 2 glycosyl transferase
YP_004108379.1	KEGG: bbt:BBta_1042 putative glycosyl transferase group 1; manually curated; PFAM: glycosyl transferase group 1
YP_004108380.1	KEGG: bbt:BBta_1039 hypothetical protein
YP_004108381.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; GMC oxidoreductase; KEGG: mes:Meso_2585 glucose-methanol-choline oxidoreductase
YP_004108383.1	PFAM: glycoside hydrolase family 10; KEGG: bbt:BBta_1040 hypothetical protein
YP_004108384.1	PFAM: acyltransferase 3; KEGG: rle:RL3831 putative O-acetyl transferase
YP_004108385.1	KEGG: bph:Bphy_1672 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding
YP_004108386.1	KEGG: bid:Bind_0846 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase ; Acyl transferase; phosphopantetheine-binding; aminotransferase class-III; condensation domain protein
YP_004108387.1	PFAM: condensation domain protein; Thioesterase; KEGG: bph:Bphy_1673 condensation domain-containing protein
YP_004108388.1	KEGG: msl:Msil_1245 platelet-activating factor acetylhydrolase plasma/intracellular isoform II
YP_004108389.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: mrd:Mrad2831_0013 4'-phosphopantetheinyl transferase
YP_004108390.1	KEGG: isc:IscW_ISCW017114 coagulation factor precursor, putative
YP_004108391.1	KEGG: ppg:PputGB1_2551 curlin-associated protein
YP_004108392.1	KEGG: dre:570672 si:dkey-90n12.3
YP_004108393.1	KEGG: mpo:Mpop_0030 curli production assembly/transport component CsgG; manually curated; PFAM: Curli production assembly/transport component CsgG
YP_004108394.1	PFAM: Curli production assembly/transport component CsgF; KEGG: pen:PSEEN2838 curli production assembly/transport component CsgF precursor
YP_004108395.1	KEGG: rso:RS03668 putative hemolysin-type protein
YP_004108396.1	KEGG: rsq:Rsph17025_3601 hypothetical protein
YP_004108397.1	PFAM: Curlin associated repeat protein; KEGG: mmi:MMAR_2591 PPE family protein, PPE8
YP_004108398.1	KEGG: sli:Slin_5326 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004108399.1	KEGG: bvi:Bcep1808_6712 hypothetical protein
YP_004108400.1	KEGG: csa:Csal_1569 Na(+)-translocating NADH-quinone reductase subunit A
YP_004108401.1	KEGG: ava:Ava_4835 hypothetical protein
YP_004108402.1	KEGG: rsq:Rsph17025_3294 hypothetical protein
YP_004108403.1	TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase
YP_004108404.1	KEGG: bra:BRADO0757 putative phosphomannomutase/phosphoglucomutase (PMM / PGM); PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase
YP_004108405.1	manually curated; KEGG: bbt:BBta_1078 hypothetical protein
YP_004108406.1	PFAM: peptidase M50; KEGG: nha:Nham_1519 peptidase M50
YP_004108407.1	KEGG: mea:Mex_1p5255 serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein
YP_004108408.1	KEGG: oca:OCAR_7483 hypothetical protein
YP_004108409.1	KEGG: mpo:Mpop_2641 transglutaminase domain protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein
YP_004108410.1	TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: msl:Msil_3793 glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain
YP_004108411.1	KEGG: bra:BRADO3437 hypothetical protein
YP_004108412.1	PFAM: protein of unknown function DUF892; KEGG: bja:bll7648 hypothetical protein
YP_004108413.1	KEGG: mjl:Mjls_2587 TetR family transcriptional regulator
YP_004108414.1	KEGG: rhi:NGR_c22390 putative ATP-dependent hydrolase protein; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase
YP_004108415.1	KEGG: mch:Mchl_0986 hypothetical protein
YP_004108416.1	manually curated; PFAM: helix-turn-helix domain protein; KEGG: mno:Mnod_7736 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein
YP_004108417.1	KEGG: oca:OCAR_7680 hypothetical protein
YP_004108418.1	KEGG: azl:AZL_d04780 similar to UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
YP_004108419.1	KEGG: tpd:Teth39_1006 hypothetical protein
YP_004108420.1	KEGG: btl:BALH_4300 collagen-like protein
YP_004108421.1	PFAM: RTX domain protein; Hemolysin-type calcium-binding region; KEGG: mlo:mll1028 rhizobiocin RzcA
YP_004108422.1	TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; KEGG: mlo:mll1027 rhizobiocin secretion protein RspD; SMART: AAA ATPase
YP_004108423.1	KEGG: mpo:Mpop_2544 type I secretion membrane fusion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein
YP_004108424.1	KEGG: nwi:Nwi_0627 LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR
YP_004108425.1	PFAM: autoinducer synthesis protein; KEGG: nwi:Nwi_0626 autoinducer synthesis protein
YP_004108426.1	manually curated; KEGG: bja:blr6106 hypothetical protein
YP_004108427.1	PFAM: nuclease (SNase domain protein); KEGG: rle:RL2121 putative transmembrane protein
YP_004108428.1	KEGG: nml:Namu_2040 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_004108429.1	KEGG: jan:Jann_1534 response regulator receiver domain-containing protein
YP_004108430.1	manually curated; KEGG: jan:Jann_1532 hypothetical protein
YP_004108431.1	PFAM: transposase IS3/IS911 family protein; KEGG: oan:Oant_4528 transposase IS3/IS911 family protein
YP_004108432.1	PFAM: Integrase catalytic region; KEGG: oan:Oant_4683 integrase catalytic region
YP_004108433.1	KEGG: pha:PSHAa2353 hypothetical protein
YP_004108434.1	PFAM: Protein of unknown function DUF2235; KEGG: nha:Nham_0079 hypothetical protein
YP_004108435.1	KEGG: bid:Bind_0645 hypothetical protein
YP_004108436.1	KEGG: bja:blr6106 hypothetical protein
YP_004108437.1	KEGG: cya:CYA_2444 hypothetical protein
YP_004108438.1	manually curated; KEGG: oca:OCAR_7650 hypothetical protein
YP_004108439.1	KEGG: fsu:Fisuc_1342 hypothetical protein
YP_004108440.1	KEGG: hmu:Hmuk_1375 hypothetical protein
YP_004108441.1	KEGG: nha:Nham_4291 hypothetical protein
YP_004108442.1	PFAM: Domain of unknown function DUF1814; KEGG: nha:Nham_4292 hypothetical protein
YP_004108443.1	KEGG: sjp:SJA_C1-20340 hypothetical protein
YP_004108444.1	KEGG: sjp:SJA_C1-20350 hypothetical protein
YP_004108445.1	PFAM: UvrD/REP helicase; protein of unknown function DUF955; KEGG: sjp:SJA_C1-20360 putative ATP-dependent DNA helicase
YP_004108446.1	KEGG: hba:Hbal_0676 hypothetical protein
YP_004108447.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: sjp:SJA_C1-20380 UBA/ThiF-type NAD/FAD binding fold protein
YP_004108448.1	KEGG: sjp:SJA_C1-20390 hypothetical protein
YP_004108449.1	PFAM: Protein of unknown function DUF2158; KEGG: avn:Avin_20850 hypothetical protein
YP_004108450.1	KEGG: scb:SCAB_29231 putative helicase; PFAM: DEAD/DEAH box helicase domain protein; peptidase C14 caspase catalytic subunit p20; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_004108451.1	KEGG: cin:100177270 similar to predicted protein
YP_004108452.1	PFAM: MaoC domain protein dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: ttu:TERTU_2202 modular polyketide synthase, type I PKS
YP_004108453.1	PFAM: glycosyl transferase group 1; KEGG: gvi:glr1065 glycosyltransferase
YP_004108454.1	KEGG: glo:Glov_1521 hypothetical protein
YP_004108455.1	PFAM: glycosyl transferase group 1; KEGG: sus:Acid_4714 thioesterase
YP_004108456.1	PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; KEGG: cth:Cthe_1905 glycosyl transferase family protein
YP_004108457.1	KEGG: sus:Acid_4716 FkbH like protein; TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; PFAM: phosphopantetheine-binding
YP_004108458.1	PFAM: Glycosyltransferase 28 domain; KEGG: sit:TM1040_3688 hypothetical protein
YP_004108459.1	manually curated; TIGRFAM: YD repeat protein; KEGG: cja:CJA_2623 rhs family protein; PFAM: YD repeat-containing protein
YP_004108460.1	KEGG: rba:RB574 hypothetical protein
YP_004108461.1	PFAM: integrase family protein; KEGG: msl:Msil_2093 integrase family protein
YP_004108462.1	KEGG: bbt:BBta_3799 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_004108463.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xau:Xaut_0903 enoyl-CoA hydratase
YP_004108464.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pla:Plav_0158 short-chain dehydrogenase/reductase SDR
YP_004108465.1	PFAM: MaoC domain protein dehydratase; KEGG: pla:Plav_0157 dehydratase
YP_004108466.1	KEGG: pla:Plav_0156 hypothetical protein
YP_004108467.1	PFAM: Thiolase-like; KEGG: mpt:Mpe_A0178 lipid-transfer protein
YP_004108468.1	PFAM: regulatory protein TetR; KEGG: sus:Acid_5697 TetR family transcriptional regulator
YP_004108469.1	KEGG: ctt:CtCNB1_1709 long-chain-fatty-acid--CoA ligase; manually curated; PFAM: AMP-dependent synthetase and ligase
YP_004108470.1	KEGG: bvi:Bcep1808_1832 hypothetical protein
YP_004108471.1	PFAM: Extracellular ligand-binding receptor; KEGG: dsh:Dshi_1404 branched-chain amino acid ABC transporter
YP_004108472.1	PFAM: inner-membrane translocator; KEGG: sit:TM1040_1512 inner-membrane translocator
YP_004108473.1	PFAM: inner-membrane translocator; KEGG: sit:TM1040_1513 inner-membrane translocator
YP_004108474.1	KEGG: jan:Jann_1384 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004108475.1	KEGG: jan:Jann_1385 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004108476.1	PFAM: regulatory protein TetR; KEGG: bja:blr5456 transcriptional regulatory protein
YP_004108477.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO3035 putative acyl-CoA dehydrogenase
YP_004108478.1	PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO3036 putative aminoglycoside phosphotransferase
YP_004108479.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO3041 putative short-chain dehydrogenase/reductase SDR family protein
YP_004108480.1	PFAM: Phosphoglycerate mutase; KEGG: bja:bll5443 hypothetical protein
YP_004108481.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO3043 putative short-chain dehydrogenase/reductase SDR
YP_004108482.1	PFAM: beta-lactamase; KEGG: bja:blr5441 hypothetical protein
YP_004108483.1	KEGG: bbt:BBta_5072 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein
YP_004108484.1	KEGG: xau:Xaut_3357 hypothetical protein
YP_004108485.1	KEGG: mei:Msip34_1578 hypothetical protein
YP_004108486.1	KEGG: nha:Nham_3719 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug
YP_004108487.1	KEGG: bja:bsl5417 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein
YP_004108488.1	TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: nha:Nham_1526 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein
YP_004108489.1	TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: bja:bll5415 50S ribosomal protein L11; SMART: ribosomal protein L11
YP_004108490.1	KEGG: bbt:BBta_5086 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1
YP_004108491.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bra:BRADO3050 putative glyoxylate reductase (glycolate reductase)
YP_004108492.1	PFAM: ribosomal protein L10; KEGG: nha:Nham_1529 50S ribosomal protein L10
YP_004108493.1	KEGG: nha:Nham_1530 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12
YP_004108494.1	KEGG: bra:BRADO3054 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7
YP_004108495.1	TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: nha:Nham_1532 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein
YP_004108496.1	KEGG: bbt:BBta_5079 hypothetical protein; manually curated; PFAM: amine oxidase; Methyltransferase type 11
YP_004108497.1	KEGG: bbt:BBta_5078 putative ABC transporter, ATPase and permease components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_004108498.1	KEGG: nha:Nham_3666 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004108499.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_5280 3-demethylubiquinone-9 3-methyltransferase
YP_004108500.1	PFAM: major facilitator superfamily MFS_1; KEGG: smd:Smed_3859 major facilitator transporter
YP_004108501.1	PFAM: O-methyltransferase family 3; KEGG: msl:Msil_0886 O-methyltransferase family 3
YP_004108502.1	KEGG: msl:Msil_0885 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain
YP_004108503.1	KEGG: bja:blr2658 hypothetical protein
YP_004108504.1	KEGG: nha:Nham_1540 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23
YP_004108505.1	KEGG: nwi:Nwi_1360 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7
YP_004108506.1	KEGG: bbt:BBta_5073 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein
YP_004108507.1	KEGG: bbt:BBta_5072 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein
YP_004108508.1	KEGG: nha:Nham_1544 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10
YP_004108509.1	KEGG: bja:bll5400 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3
YP_004108510.1	PFAM: ribosomal protein L4/L1e; KEGG: bja:bll5399 50S ribosomal protein L4
YP_004108511.1	PFAM: Ribosomal protein L25/L23; KEGG: bbt:BBta_5068 50S ribosomal protein L23
YP_004108512.1	KEGG: oca:OCAR_5680 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2
YP_004108513.1	KEGG: bbt:BBta_5066 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15
YP_004108514.1	KEGG: oca:OCAR_5682 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17
YP_004108515.1	TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: bja:bll5394 30S ribosomal protein S3; SMART: KH domain protein
YP_004108516.1	KEGG: bra:BRADO3073 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16
YP_004108517.1	KEGG: bbt:BBta_5062 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29
YP_004108518.1	KEGG: nha:Nham_1554 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17
YP_004108519.1	KEGG: bbt:BBta_5060 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e
YP_004108520.1	TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: bja:bll5389 50S ribosomal protein L24; SMART: KOW domain protein
YP_004108521.1	KEGG: bbt:BBta_5058 50S ribosomal protein L5
YP_004108522.1	PFAM: ribosomal protein S14; KEGG: bbt:BBta_5057 30S ribosomal protein S14
YP_004108523.1	PFAM: ribosomal protein S8; KEGG: nwi:Nwi_1378 30S ribosomal protein S8
YP_004108524.1	KEGG: bbt:BBta_5055 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain
YP_004108525.1	KEGG: nwi:Nwi_1380 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E
YP_004108526.1	KEGG: nwi:Nwi_1381 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein
YP_004108527.1	KEGG: nwi:Nwi_1382 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30
YP_004108528.1	TIGRFAM: ribosomal protein L15; KEGG: bbt:BBta_5051 50S ribosomal protein L15
YP_004108529.1	KEGG: bja:bll5380 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein
YP_004108530.1	KEGG: oca:OCAR_5698 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase
YP_004108531.1	KEGG: oca:OCAR_5699 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13
YP_004108532.1	KEGG: bbt:BBta_5047 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11
YP_004108533.1	TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: bbt:BBta_5046 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type
YP_004108534.1	KEGG: bbt:BBta_5045 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17
YP_004108535.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oca:OCAR_5704 oxidoreductase, short chain dehydrogenase/reductase family
YP_004108536.1	KEGG: bja:blr5371 zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein
YP_004108537.1	PFAM: helix-turn-helix HxlR type; KEGG: bja:bll5370 transcriptional regulatory protein
YP_004108538.1	SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bbt:BBta_5038 serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap
YP_004108539.1	KEGG: bja:bll5367 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase
YP_004108540.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bbt:BBta_1127 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein
YP_004108541.1	PFAM: protein of unknown function UPF0047; KEGG: bra:BRADO6457 hypothetical protein
YP_004108542.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr2988 hypothetical protein
YP_004108543.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: mrd:Mrad2831_4432 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver
YP_004108544.1	PFAM: nitroreductase; KEGG: pzu:PHZ_c0956 nitroreductase
YP_004108545.1	KEGG: abm:ABSDF3536 hypothetical protein
YP_004108546.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bbt:BBta_5034 ribosomal large subunit pseudouridine synthase C; SMART: RNA-binding S4 domain protein
YP_004108547.1	KEGG: oca:OCAR_5711 hypothetical protein
YP_004108548.1	PFAM: ATP12 ATPase; KEGG: bja:bll5364 hypothetical protein
YP_004108549.1	KEGG: bbt:BBta_5030 hypothetical protein
YP_004108550.1	PFAM: type III secretion exporter; KEGG: nha:Nham_1578 type III secretion protein
YP_004108551.1	KEGG: bbt:BBta_5025 hypothetical protein
YP_004108552.1	PFAM: carboxyl transferase; KEGG: bra:BRADO4331 putative propionyl-CoA carboxylase beta chain
YP_004108553.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: mdi:METDI3166 putative epimerase with NAD(P)-binding Rossmann-fold domain (YeeZ-like)
YP_004108554.1	KEGG: nhl:Nhal_2911 putative lipoprotein transmembrane
YP_004108555.1	PFAM: formate/nitrite transporter; KEGG: bja:bll2801 formate transporter
YP_004108556.1	KEGG: bja:bll2800 bifunctional serine/threonine kinase and phosphatase; PFAM: Serine/threonine-protein kinase-like domain; Stage II sporulation E family protein; SMART: serine/threonine protein kinase; protein phosphatase 2C domain protein; Tyrosine-protein kinase, catalytic domain
YP_004108557.1	KEGG: bid:Bind_2416 hypothetical protein
YP_004108558.1	PFAM: protein of unknown function DUF1295; KEGG: blt:Balat_0580 hypothetical protein
YP_004108559.1	KEGG: bja:bsr5347 hypothetical protein
YP_004108560.1	KEGG: bja:blr5341 hypothetical protein
YP_004108561.1	PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: bja:bll5338 indolepyruvate ferredoxin oxidoreductase
YP_004108562.1	KEGG: bra:BRADO4314 acetyl-CoA acetyltransferase
YP_004108563.1	PFAM: protein of unknown function DUF35; KEGG: bbt:BBta_5005 hypothetical protein
YP_004108564.1	KEGG: bja:bll5333 putative dehydrogenase; PFAM: MaoC domain protein dehydratase
YP_004108565.1	PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll5331 hypothetical protein
YP_004108566.1	PFAM: NUDIX hydrolase; KEGG: bbt:BBta_5001 hypothetical protein
YP_004108567.1	TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; KEGG: bbt:BBta_5502 putative alcohol dehydrogenase; SMART: Pyrrolo-quinoline quinone beta-propeller repeat
YP_004108568.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: bja:bll5328 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein
YP_004108569.1	KEGG: nha:Nham_2176 hypothetical protein
YP_004108570.1	KEGG: bra:BRADO6631 putative methyl-accepting chemotaxis receptor/sensory transducer precursor; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004108571.1	KEGG: bja:bll5314 hypothetical protein
YP_004108572.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:bll5313 hypothetical protein
YP_004108573.1	KEGG: bja:blr5311 histon H1
YP_004108574.1	PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: bbt:BBta_4932 deoxyribodipyrimidine photo-lyase type I
YP_004108575.1	PFAM: Protein of unknown function DUF2177, membrane; KEGG: bra:BRADO3234 hypothetical protein
YP_004108576.1	KEGG: nwi:Nwi_1737 hypothetical protein
YP_004108577.1	PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: nha:Nham_2165 carbamoyl-phosphate synthase L chain, ATP-binding
YP_004108578.1	KEGG: bja:bll5266 putative carboxy-phosphonoenolpyruvate mutase
YP_004108579.1	KEGG: bja:bsl5265 putative acylphosphatase; manually curated; PFAM: acylphosphatase
YP_004108580.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; GAF domain protein; KEGG: bja:bll6545 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein
YP_004108581.1	TIGRFAM: lipoate-protein ligase B; KEGG: bja:blr5257 lipoyltransferase; PFAM: biotin/lipoate A/B protein ligase
YP_004108582.1	KEGG: bja:bsl5256 hypothetical protein; manually curated; PFAM: surface presentation of antigens (SPOA) protein
YP_004108583.1	PFAM: RES domain protein; KEGG: xau:Xaut_5010 RES domain-containing protein
YP_004108584.1	KEGG: nha:Nham_3790 hypothetical protein
YP_004108585.1	PFAM: polysaccharide deacetylase; KEGG: nha:Nham_2435 polysaccharide deacetylase
YP_004108586.1	PFAM: polysaccharide deacetylase; KEGG: nha:Nham_2434 polysaccharide deacetylase
YP_004108587.1	KEGG: bra:BRADO4563 putative magnesium transporter MgtE-like (divalent cation transporter Mg2+/Ni2+/Co2+); TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region
YP_004108588.1	PFAM: aldo/keto reductase; KEGG: bra:BRADO4561 putative aldo/keto reductase; putative 2,5-diketo-D-gluconate reductase B (DkgB-like)
YP_004108589.1	PFAM: protein of unknown function DUF218; KEGG: nha:Nham_2431 hypothetical protein
YP_004108590.1	KEGG: oca:OCAR_5754 hypothetical protein
YP_004108591.1	PFAM: Glutathione S-transferase domain; KEGG: nha:Nham_2428 glutathione S-transferase-like
YP_004108592.1	KEGG: nha:Nham_2427 hypothetical protein
YP_004108593.1	KEGG: nha:Nham_2426 hypothetical protein
YP_004108594.1	PFAM: conserved hypothetical protein; KEGG: nha:Nham_2425 hypothetical protein
YP_004108595.1	KEGG: bja:blr5162 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase
YP_004108596.1	PFAM: ATPase MipZ; KEGG: bja:bll5161 hypothetical protein
YP_004108597.1	KEGG: bra:BRADO4552 putative alpha/beta-hydrolases
YP_004108598.1	KEGG: bja:bll5159 hypothetical protein
YP_004108599.1	KEGG: bja:bll5157 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein
YP_004108600.1	KEGG: nha:Nham_2420 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein
YP_004108601.1	KEGG: nha:Nham_2418 hypothetical protein
YP_004108602.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: bja:bll5154 ATP-dependent Clp protease adaptor protein ClpS
YP_004108603.1	TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: bja:bll5153 ClpA-like protein; SMART: AAA ATPase
YP_004108604.1	KEGG: bja:blr2522 hypothetical protein
YP_004108605.1	KEGG: bbt:BBta_4763 hypothetical protein
YP_004108606.1	PFAM: Lytic transglycosylase catalytic; Sporulation domain protein; KEGG: bja:bll5139 transglycosylase
YP_004108607.1	PFAM: AzlC family protein; KEGG: bra:BRADO4535 putative permease
YP_004108608.1	PFAM: branched-chain amino acid transport; KEGG: bbt:BBta_4760 hypothetical protein
YP_004108609.1	PFAM: protein of unknown function UPF0066; KEGG: nha:Nham_2452 hypothetical protein
YP_004108610.1	KEGG: rca:Rcas_3954 CaCA family Na(+)/Ca(+) antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region
YP_004108611.1	PFAM: histidine triad (HIT) protein; KEGG: bja:blr5135 hypothetical protein
YP_004108612.1	PFAM: protein of unknown function DUF482; KEGG: bja:blr5134 hypothetical protein
YP_004108613.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bja:blr5133 hypothetical protein
YP_004108614.1	PFAM: Endoribonuclease L-PSP; KEGG: nwi:Nwi_1427 endoribonuclease L-PSP
YP_004108615.1	PFAM: Domain of unknown function DUF1849; KEGG: nha:Nham_2446 hypothetical protein
YP_004108616.1	KEGG: bja:blr5126 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein
YP_004108617.1	KEGG: bbt:BBta_4748 hypothetical protein
YP_004108618.1	KEGG: bja:bll5124 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004108619.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: nha:Nham_2442 response regulator PleD; SMART: GGDEF domain containing protein; response regulator receiver
YP_004108620.1	KEGG: sit:TM1040_0816 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2136
YP_004108621.1	KEGG: mno:Mnod_7326 putative transcription regulator with HTH domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004108622.1	KEGG: nha:Nham_2441 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33
YP_004108623.1	PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A3477 major facilitator transporter
YP_004108624.1	PFAM: NUDIX hydrolase; KEGG: bra:BRADO4511 putative NUDIX hydrolase
YP_004108625.1	PFAM: protein of unknown function DUF983; KEGG: bbt:BBta_4735 hypothetical protein
YP_004108626.1	TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: nha:Nham_2438 ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein
YP_004108627.1	SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: nha:Nham_2437 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein
YP_004108628.1	KEGG: nwi:Nwi_1711 hypothetical protein
YP_004108629.1	KEGG: nha:Nham_2285 DNA processing protein DprA, putative; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein
YP_004108630.1	PFAM: protein of unknown function DUF205; KEGG: bja:blr5101 putative glycerol-3-phosphate acyltransferase PlsY
YP_004108631.1	KEGG: bja:blr5100 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase
YP_004108632.1	TIGRFAM: aspartate carbamoyltransferase; KEGG: bbt:BBta_4725 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region
YP_004108633.1	KEGG: bbt:BBta_0512 indole-3-pyruvate decarboxylase; TIGRFAM: indolepyruvate/phenylpyruvate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding
YP_004108634.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll5097 acyl CoA dehydrogenase
YP_004108635.1	KEGG: gem:GM21_0959 sec-C motif domain protein
YP_004108636.1	KEGG: nha:Nham_2279 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold
YP_004108637.1	PFAM: cyclase family protein; KEGG: bra:BRADO4495 putative cyclase
YP_004108638.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: nha:Nham_2278 2-nitropropane dioxygenase, NPD
YP_004108639.1	KEGG: oca:OCAR_5794 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit
YP_004108640.1	KEGG: nha:Nham_2276 hypothetical protein
YP_004108641.1	KEGG: oca:OCAR_6294 hypothetical protein
YP_004108642.1	KEGG: nha:Nham_2275 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase
YP_004108643.1	KEGG: mlo:mlr9681 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein
YP_004108644.1	PFAM: Patatin; KEGG: nha:Nham_2273 patatin
YP_004108645.1	KEGG: nwi:Nwi_1997 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase
YP_004108646.1	KEGG: lbz:LbrM27_V2.1290 histone H1
YP_004108647.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: bbt:BBta_4706 hypothetical protein
YP_004108648.1	PFAM: conserved hypothetical protein; KEGG: reu:Reut_A0309 twin-arginine translocation pathway signal
YP_004108649.1	KEGG: oca:OCAR_6389 NnrU protein
YP_004108650.1	TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: nha:Nham_1683 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase
YP_004108651.1	PFAM: Protein of unknown function DUF2133; KEGG: bja:blr4050 hypothetical protein
YP_004108652.1	KEGG: bbt:BBta_3775 hypothetical protein
YP_004108653.1	KEGG: bja:blr4052 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related
YP_004108654.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr4054 tetracycline resistance protein
YP_004108655.1	TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: cell surface receptor IPT/TIG domain protein; KEGG: bra:BRADO3823 hypothetical protein; SMART: cell surface receptor IPT/TIG domain protein
YP_004108656.1	PFAM: Tail Collar domain protein; KEGG: ote:Oter_4253 tail collar domain-containing protein
YP_004108657.1	KEGG: rce:RC1_3289 hypothetical protein
YP_004108658.1	PFAM: GCN5-related N-acetyltransferase; KEGG: cja:CJA_0596 acetyltransferase, GNAT family
YP_004108659.1	KEGG: bbt:BBta_3779 putative ABC transporter, substrate binding protein
YP_004108660.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nwi:Nwi_2019 short-chain dehydrogenase/reductase SDR
YP_004108661.1	KEGG: oca:OCAR_6382 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase
YP_004108662.1	PFAM: Colicin V production protein; KEGG: bja:bll4061 colicin V production protein
YP_004108663.1	KEGG: bja:bll4062 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase
YP_004108664.1	KEGG: xau:Xaut_1872 hypothetical protein
YP_004108665.1	KEGG: bra:BRADO5343 hypothetical protein
YP_004108666.1	TIGRFAM: alanine racemase; KEGG: nha:Nham_2290 alanine racemase; PFAM: alanine racemase domain protein
YP_004108667.1	TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: nha:Nham_2289 replicative DNA helicase; SMART: AAA ATPase
YP_004108668.1	KEGG: nha:Nham_2287 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004108669.1	KEGG: bja:blr4073 hypothetical protein
YP_004108670.1	PFAM: regulatory protein TetR; KEGG: bja:blr4074 transcriptional regulatory protein
YP_004108671.1	PFAM: thioesterase superfamily protein; KEGG: bja:blr4075 hypothetical protein
YP_004108672.1	KEGG: bja:bll4076 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like
YP_004108673.1	KEGG: nha:Nham_2414 hypothetical protein
YP_004108674.1	KEGG: nwi:Nwi_1692 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18
YP_004108675.1	KEGG: nha:Nham_2355 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like
YP_004108676.1	KEGG: bja:blr4082 acyl-carrier-protein S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase
YP_004108677.1	KEGG: nha:Nham_2353 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR
YP_004108678.1	KEGG: nwi:Nwi_1687 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding
YP_004108679.1	KEGG: bbt:BBta_3820 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase
YP_004108680.1	PFAM: aminodeoxychorismate lyase; KEGG: nha:Nham_2350 aminodeoxychorismate lyase
YP_004108681.1	PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: bja:blr4087 hypothetical protein
YP_004108682.1	SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: bra:BRADO3317 guanylate kinase; PFAM: guanylate kinase
YP_004108683.1	KEGG: nha:Nham_2347 hypothetical protein
YP_004108684.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bja:bll4101 putative NAD-dependent alcohol dehydrogenase
YP_004108685.1	TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: bja:bll4102 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like
YP_004108686.1	TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bja:bll4103 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA
YP_004108687.1	PFAM: SurA domain; KEGG: nha:Nham_2343 hypothetical protein
YP_004108688.1	PFAM: Organic solvent tolerance protein; KEGG: nha:Nham_2342 organic solvent tolerance protein
YP_004108689.1	PFAM: permease YjgP/YjgQ family protein; KEGG: nha:Nham_2341 permease YjgP/YjgQ
YP_004108690.1	PFAM: permease YjgP/YjgQ family protein; KEGG: nha:Nham_2340 permease YjgP/YjgQ
YP_004108691.1	PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: nha:Nham_2339 leucyl aminopeptidase
YP_004108692.1	PFAM: DNA polymerase III chi subunit HolC; KEGG: bja:blr4109 DNA polymerase III subunit chi
YP_004108693.1	KEGG: oca:OCAR_6350 putative lipoprotein
YP_004108694.1	KEGG: bra:BRADO3331 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004108695.1	PFAM: nucleoside diphosphate kinase; KEGG: bbt:BBta_3838 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase
YP_004108696.1	PFAM: Integral membrane protein TerC; KEGG: bja:blr4120 hypothetical protein
YP_004108697.1	manually curated; KEGG: bja:blr1556 hypothetical protein
YP_004108698.1	KEGG: nwi:Nwi_1599 cold-shock protein, DNA-binding; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_004108699.1	KEGG: bra:BRADO3345 phosphoribosylglycinamide formyltransferase (GarT) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase); TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein
YP_004108700.1	TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: bbt:BBta_3852 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_004108701.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: nha:Nham_2117 CDP-alcohol phosphatidyltransferase
YP_004108702.1	KEGG: bja:bll4123 hypothetical protein
YP_004108703.1	TIGRFAM: Polyphosphate kinase; KEGG: nwi:Nwi_1594 polyphosphate kinase; PFAM: Polyphosphate kinase
YP_004108704.1	PFAM: Ppx/GppA phosphatase; KEGG: bja:bll4121 hypothetical protein
YP_004108705.1	KEGG: ara:Arad_4066 hypothetical protein
YP_004108706.1	SMART: 3'-5' exonuclease; TIGRFAM: ribonuclease D; KEGG: bbt:BBta_3861 ribonuclease D (RNase D); PFAM: 3'-5' exonuclease; HRDC domain protein
YP_004108707.1	PFAM: protein of unknown function UPF0061; KEGG: bra:BRADO3358 hypothetical protein
YP_004108708.1	KEGG: nwi:Nwi_1588 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein
YP_004108709.1	PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: bbt:BBta_3876 malic enzyme
YP_004108710.1	PFAM: DoxX family protein; KEGG: nha:Nham_2109 DoxX
YP_004108711.1	KEGG: nha:Nham_2108 hypothetical protein
YP_004108712.1	PFAM: polysaccharide deacetylase; KEGG: nha:Nham_2107 polysaccharide deacetylase
YP_004108713.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_2106 hypothetical protein
YP_004108714.1	PFAM: CreA family protein; KEGG: bja:blr4151 hypothetical protein
YP_004108716.1	KEGG: bur:Bcep18194_B2513 glucose-methanol-choline oxidoreductase
YP_004108717.1	KEGG: nwi:Nwi_1582 hypothetical protein
YP_004108718.1	KEGG: bja:blr4156 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_004108719.1	PFAM: thioesterase superfamily protein; KEGG: bja:blr4161 hypothetical protein
YP_004108720.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_3891 GNAT family acetyltransferase
YP_004108721.1	KEGG: nwi:Nwi_1581 hypothetical protein
YP_004108722.1	PFAM: protein of unknown function DUF1328; KEGG: bja:bsl5717 hypothetical protein
YP_004108723.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: bja:blr4172 hypothetical protein
YP_004108724.1	PFAM: K potassium transporter; KEGG: dar:Daro_1184 K+ potassium transporter
YP_004108725.1	PFAM: Abortive infection protein; KEGG: paa:Paes_1404 abortive infection protein
YP_004108726.1	KEGG: bja:bsr4396 hypothetical protein
YP_004108727.1	KEGG: bja:bll5535 hypothetical protein
YP_004108728.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bbt:BBta_6701 putative diguanylate cyclase (GGDEF); SMART: GGDEF domain containing protein
YP_004108729.1	PFAM: regulatory protein TetR; KEGG: afw:Anae109_3254 TetR family transcriptional regulator
YP_004108730.1	KEGG: vap:Vapar_2562 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004108731.1	KEGG: mrd:Mrad2831_3044 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein
YP_004108732.1	PFAM: glutamate--cysteine ligase GCS2; KEGG: bra:BRADO0861 carboxylate-amine ligase
YP_004108733.1	KEGG: bra:BRADO0860 asparagine synthetase; TIGRFAM: asparagine synthase family amidotransferase; asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II
YP_004108734.1	KEGG: bra:BRADO0859 putative glutamine amidotransferase, class-II
YP_004108735.1	PFAM: UspA domain protein; KEGG: rmr:Rmar_0032 UspA domain protein
YP_004108736.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; Na+/H+ antiporter MnhB subunit-related protein; KEGG: jan:Jann_3715 putative monovalent cation/H+ antiporter subunit A
YP_004108737.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: tmz:Tmz1t_1101 NADH-ubiquinone oxidoreductase chain 4L
YP_004108738.1	KEGG: tmz:Tmz1t_1102 NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_004108739.1	PFAM: cation antiporter; KEGG: jan:Jann_3718 putative monovalent cation/H+ antiporter subunit E
YP_004108740.1	PFAM: multiple resistance and pH regulation protein F; KEGG: dsh:Dshi_3809 multiple resistance and pH regulation protein F
YP_004108741.1	KEGG: pde:Pden_0702 monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit
YP_004108742.1	KEGG: swo:Swol_0406 hypothetical protein
YP_004108743.1	KEGG: swo:Swol_0407 nitrogenase molybdenum-iron protein alpha and beta chains-like protein
YP_004108744.1	KEGG: dsy:DSY3569 nitrogenase subunit NifH; PFAM: NifH/frxC-family protein
YP_004108745.1	PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cff:CFF8240_1206 putative TonB-dependent receptor
YP_004108746.1	PFAM: periplasmic binding protein; KEGG: rle:RL2022 putative solute-binding component of cationic transporter
YP_004108747.1	PFAM: transport system permease protein; KEGG: pde:Pden_1169 transport system permease protein
YP_004108748.1	KEGG: pde:Pden_1170 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004108749.1	KEGG: rlg:Rleg_1653 hypothetical protein
YP_004108750.1	KEGG: rha:RHA1_ro03621 hypothetical protein
YP_004108751.1	KEGG: rer:RER_36430 hypothetical protein
YP_004108753.1	PFAM: cytochrome c class II; KEGG: bid:Bind_0112 cytochrome c prime
YP_004108754.1	KEGG: bid:Bind_0113 cytochrome b561
YP_004108755.1	PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_3627 thioesterase superfamily protein
YP_004108756.1	KEGG: pde:Pden_4695 hypothetical protein
YP_004108757.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsh:Dshi_2526 putative sulfide quinone-rductase
YP_004108758.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: alv:Alvin_2499 cytochrome bd ubiquinol oxidase subunit I
YP_004108759.1	KEGG: alv:Alvin_2500 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II
YP_004108760.1	KEGG: pha:PSHAa2020 hypothetical protein; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein
YP_004108761.1	TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: alv:Alvin_0482 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; SMART: AAA ATPase
YP_004108762.1	KEGG: alv:Alvin_0481 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related
YP_004108763.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_4287 LysR family transcriptional regulator
YP_004108764.1	KEGG: bra:BRADO3420 4-aminobutyrate aminotransferase ((S)-3-amino-2-methylpropionate transaminase); TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III
YP_004108765.1	KEGG: bra:BRADO0028 succinate-semialdehyde dehydrogenase [NADP+] (SSDH); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase
YP_004108766.1	KEGG: bbt:BBta_4285 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_004108767.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rsk:RSKD131_4355 pyruvate decarboxylase
YP_004108768.1	PFAM: extracellular solute-binding protein family 5; KEGG: azl:AZL_b03280 peptide/nickel transport system substrate-binding protein
YP_004108769.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azl:AZL_b03270 peptide/nickel transport system permease protein
YP_004108770.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azl:AZL_b03260 peptide/nickel transport system permease protein
YP_004108771.1	KEGG: azl:AZL_b03250 peptide/nickel transport system ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_004108772.1	TIGRFAM: gamma-glutamyltransferase; KEGG: bbt:BBta_7627 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase
YP_004108773.1	KEGG: ret:RHE_PB00040 hypothetical protein
YP_004108774.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: maq:Maqu_2810 alcohol dehydrogenase
YP_004108775.1	PFAM: Protein of unknown function DUF1847; KEGG: cth:Cthe_2788 hypothetical protein
YP_004108776.1	KEGG: bja:bll6455 ABC transporter substrate-binding protein
YP_004108777.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6454 ABC transporter permease protein
YP_004108778.1	KEGG: bra:BRADO4363 alkanesulfonate ABC transporter, ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004108779.1	KEGG: bja:bll3359 hypothetical protein
YP_004108780.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: cvi:CV_0893 5-carboxymethyl-2-hydroxymuconate D-isomerase
YP_004108781.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: xau:Xaut_2408 diguanylate cyclase; SMART: GGDEF domain containing protein
YP_004108782.1	KEGG: pde:Pden_0116 hexapaptide repeat-containing transferase
YP_004108783.1	PFAM: transposase IS3/IS911 family protein; KEGG: oan:Oant_4528 transposase IS3/IS911 family protein
YP_004108784.1	PFAM: Integrase catalytic region; KEGG: oan:Oant_4683 integrase catalytic region
YP_004108785.1	PFAM: HPr serine kinase domain protein; KEGG: sli:Slin_1942 hypothetical protein
YP_004108786.1	PFAM: Domain of unknown function DUF1863; KEGG: bba:Bd1459 hypothetical protein
YP_004108787.1	KEGG: rec:RHECIAT_PB0000010 putative anthranilate synthase component I protein
YP_004108788.1	KEGG: bbt:BBta_4237 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase class II vitamin B12-dependent; ribonucleotide reductase large subunit
YP_004108789.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr4275 transport protein
YP_004108790.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bbt:BBta_4121 putative phosphoglycerate dehydrogenase
YP_004108791.1	PFAM: Amidase; KEGG: pla:Plav_3043 amidase
YP_004108792.1	KEGG: nwi:Nwi_1498 hypothetical protein
YP_004108793.1	KEGG: nha:Nham_2816 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II
YP_004108794.1	TIGRFAM: dethiobiotin synthase; KEGG: nha:Nham_2815 dithiobiotin synthetase
YP_004108795.1	KEGG: nha:Nham_2814 adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III
YP_004108796.1	KEGG: xau:Xaut_4923 hypothetical protein
YP_004108797.1	PFAM: Transcriptional regulator TetR ; regulatory protein TetR; KEGG: bid:Bind_2883 TetR family transcriptional regulator
YP_004108798.1	KEGG: nha:Nham_2234 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp
YP_004108799.1	PFAM: nitrogen regulatory protein P-II; KEGG: bja:blr4948 nitrogen regulatory protein PII
YP_004108800.1	KEGG: bra:BRADO4203 hypothetical protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031
YP_004108801.1	PFAM: multicopper oxidase type 2; multicopper oxidase type 1; KEGG: nha:Nham_2231 twin-arginine translocation pathway signal
YP_004108802.1	KEGG: bja:bll4945 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type
YP_004108803.1	KEGG: oca:OCAR_5908 Clp protease; PFAM: peptidase S14 ClpP
YP_004108804.1	TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; KEGG: nha:Nham_2228 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase
YP_004108805.1	SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: bra:BRADO4196 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein
YP_004108806.1	TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bja:blr4813 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein
YP_004108807.1	KEGG: azc:AZC_3305 hydrophobe/amphiphile efflux-1; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein
YP_004108808.1	KEGG: xau:Xaut_0513 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004108809.1	TIGRFAM: peptidase T; KEGG: bra:BRADO4189 peptidase T; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_004108810.1	KEGG: nha:Nham_2223 histone-like DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein
YP_004108811.1	KEGG: mes:Meso_1180 hypothetical protein
YP_004108812.1	KEGG: mes:Meso_1180 hypothetical protein
YP_004108813.1	KEGG: xau:Xaut_3596 hypothetical protein
YP_004108814.1	KEGG: mdo:100022193 similar to regenerating islet-derived 1 alpha (pancreatic stone protein, pancreatic thread protein)
YP_004108815.1	KEGG: bid:Bind_2963 aldo/keto reductase
YP_004108816.1	KEGG: azo:azo2662 hypothetical protein
YP_004108817.1	KEGG: tac:Ta0451m AAA family ATPase
YP_004108818.1	KEGG: osa:4346753 hypothetical protein
YP_004108819.1	KEGG: cak:Caul_2278 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004108820.1	KEGG: mea:Mex_1p3949 hypothetical protein
YP_004108821.1	KEGG: rop:ROP_45740 putative fatty-acid--CoA ligase
YP_004108822.1	KEGG: mva:Mvan_3805 cobalt transport protein
YP_004108823.1	KEGG: eba:ebA2185 hypothetical protein
YP_004108824.1	KEGG: hba:Hbal_1124 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004108825.1	KEGG: tai:Taci_1585 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004108826.1	KEGG: gob:Gobs_4404 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
YP_004108827.1	KEGG: oca:OCAR_6085 methyl-accepting chemotaxis protein
YP_004108828.1	KEGG: nfa:nfa13520 hypothetical protein
YP_004108829.1	KEGG: sth:STH3129 3-deoxy-7-phosphoheptulonate synthase
YP_004108831.1	KEGG: cin:100187255 similar to Chromosome 7 open reading frame 28B
YP_004108832.1	PFAM: Protein of unknown function DUF2312; KEGG: nha:Nham_1221 hypothetical protein
YP_004108833.1	KEGG: azl:AZL_020190 hypothetical protein
YP_004108835.1	KEGG: kra:Krad_1254 homoserine kinase
YP_004108836.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aac:Aaci_2995 integrase family protein
YP_004108837.1	KEGG: ret:RHE_CH01104 hypothetical protein
YP_004108838.1	KEGG: mmi:MMAR_4596 hypothetical protein
YP_004108839.1	KEGG: hypothetical protein
YP_004108840.1	KEGG: cbi:CLJ_B1819 gp9
YP_004108841.1	KEGG: bcj:BCAL2888 ribonuclease E 1
YP_004108842.1	PFAM: Terminase small subunit; KEGG: smd:Smed_1897 phage terminase small subunit
YP_004108843.1	KEGG: mlo:mll0463 bacteriophage terminase large subunit-like protein
YP_004108844.1	KEGG: mlo:mll0462 hypothetical protein
YP_004108845.1	KEGG: mlo:mll0459 hypothetical protein
YP_004108846.1	KEGG: mlo:mll0458 hypothetical protein
YP_004108847.1	KEGG: mlo:mll0457 hypothetical protein
YP_004108848.1	KEGG: mlo:mll0455 hypothetical protein
YP_004108850.1	KEGG: mlo:mll0454 hypothetical protein
YP_004108851.1	KEGG: mlo:mll0453 hypothetical protein
YP_004108852.1	KEGG: mlo:mll0452 hypothetical protein
YP_004108853.1	KEGG: mes:Meso_0236 hypothetical protein
YP_004108854.1	KEGG: ret:RHE_CH01103 hypothetical protein
YP_004108855.1	PFAM: cell wall hydrolase SleB; KEGG: mea:Mex_1p4005 hypothetical protein
YP_004108856.1	KEGG: mea:Mex_1p4005 hypothetical protein
YP_004108857.1	TIGRFAM: methyltransferase FkbM family; KEGG: acr:Acry_1567 FkbM family methyltransferase
YP_004108858.1	KEGG: mes:Meso_0240 microcystin-dependent protein-like
YP_004108859.1	KEGG: ptr:745467 mucin 19, oligomeric
YP_004108860.1	KEGG: rlt:Rleg2_0750 hypothetical protein
YP_004108861.1	PFAM: glycoside hydrolase family 24; KEGG: bmj:BMULJ_04616 bacteriophage lysozyme
YP_004108862.1	KEGG: nha:Nham_3316 hypothetical protein
YP_004108863.1	KEGG: lbz:LbrM11_V2.0500 hypothetical protein
YP_004108864.1	KEGG: PspC domain-containing protein
YP_004108865.1	KEGG: aav:Aave_1732 hypothetical protein
YP_004108866.1	KEGG: xtr:780387 MORC family CW-type zinc finger 3
YP_004108867.1	KEGG: aav:Aave_2362 hypothetical protein
YP_004108868.1	KEGG: bbu:BB_L40 ErpO
YP_004108869.1	KEGG: sti:Sthe_1477 hypothetical protein
YP_004108870.1	KEGG: xau:Xaut_3687 hypothetical protein
YP_004108871.1	KEGG: sro:Sros_3239 hypothetical protein
YP_004108872.1	KEGG: bja:bsl2206 hypothetical protein
YP_004108873.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: oca:OCAR_5922 NADH dehydrogenase subunit A
YP_004108874.1	TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: bja:bll4918 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit
YP_004108875.1	KEGG: nwi:Nwi_1886 NADH dehydrogenase subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_004108876.1	TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: nwi:Nwi_1885 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa
YP_004108877.1	TIGRFAM: methyltransferase FkbM family; KEGG: nwi:Nwi_1884 methyltransferase FkbM
YP_004108878.1	TIGRFAM: NADH-quinone oxidoreductase, E subunit; KEGG: oca:OCAR_5927 NADH dehydrogenase subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit
YP_004108879.1	KEGG: bra:BRADO4180 hypothetical protein
YP_004108880.1	TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: oca:OCAR_5928 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
YP_004108881.1	KEGG: nha:Nham_2214 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; NADH-quinone oxidoreductase chain G
YP_004108882.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: nha:Nham_2213 NADH dehydrogenase subunit H
YP_004108883.1	KEGG: nwi:Nwi_1879 NADH dehydrogenase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_004108884.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: nwi:Nwi_1878 NADH dehydrogenase subunit J
YP_004108885.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: oca:OCAR_5933 NADH dehydrogenase subunit K
YP_004108886.1	TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: bja:bll4906 NADH dehydrogenase subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein
YP_004108887.1	KEGG: bbt:BBta_4549 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_004108888.1	KEGG: bja:bll4904 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_004108889.1	KEGG: bja:bll4903 biotin--protein ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein
YP_004108890.1	PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: bra:BRADO4169 metallo-beta-lactamase family hydrolase
YP_004108891.1	TIGRFAM: methylmalonyl-CoA epimerase; KEGG: bbt:BBta_4545 methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004108892.1	PFAM: protein of unknown function DUF1467; KEGG: bra:BRADO4167 hypothetical protein
YP_004108893.1	KEGG: bra:BRADO4161 putative signal peptide
YP_004108894.1	PFAM: protein of unknown function DUF461; KEGG: bja:bll4880 hypothetical protein
YP_004108895.1	PFAM: nuclear export factor GLE1; KEGG: nha:Nham_2199 nuclear export factor GLE1
YP_004108896.1	PFAM: copper resistance protein CopC; KEGG: nha:Nham_2198 copper resistance D
YP_004108897.1	KEGG: bja:bll4877 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein
YP_004108898.1	KEGG: nha:Nham_2196 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214
YP_004108899.1	KEGG: bja:bll4875 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004108900.1	KEGG: bra:BRADO4146 hypothetical protein
YP_004108901.1	SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: bra:BRADO4145 DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type
YP_004108902.1	PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bja:bll4862 hypothetical protein
YP_004108903.1	KEGG: nha:Nham_1694 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2
YP_004108904.1	KEGG: bja:bll4860 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein
YP_004108905.1	KEGG: bbt:BBta_4515 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase
YP_004108906.1	KEGG: nwi:Nwi_1856 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor
YP_004108907.1	TIGRFAM: undecaprenyl diphosphate synthase; KEGG: nha:Nham_1698 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_004108908.1	PFAM: phosphatidate cytidylyltransferase; KEGG: nha:Nham_1699 phosphatidate cytidylyltransferase
YP_004108909.1	TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: bbt:BBta_4511 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein
YP_004108910.1	TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: nwi:Nwi_1852 peptidase M50, putative membrane-associated zinc metallopeptidase; SMART: PDZ/DHR/GLGF domain protein
YP_004108911.1	KEGG: bbt:BBta_4509 surface antigen domain-containing protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein
YP_004108912.1	KEGG: bja:bll4852 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein
YP_004108913.1	KEGG: nwi:Nwi_1849 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
YP_004108914.1	TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: nha:Nham_1705 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein
YP_004108915.1	PFAM: protein of unknown function DUF1009; KEGG: nha:Nham_1706 hypothetical protein
YP_004108916.1	TIGRFAM: lipid-A-disaccharide synthase; KEGG: bja:bll4847 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19
YP_004108917.1	KEGG: bra:BRADO4126 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase
YP_004108918.1	KEGG: nwi:Nwi_1844 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004108919.1	KEGG: bra:BRADO4124 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain
YP_004108920.1	KEGG: bja:bll4830 hypothetical protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein
YP_004108921.1	TIGRFAM: LexA repressor; KEGG: bra:BRADO4120 LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; LexA DNA-binding domain protein
YP_004108922.1	KEGG: nha:Nham_1730 MoeA-likedomain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV
YP_004108923.1	KEGG: cwo:Cwoe_0867 major facilitator superfamily MFS_1
YP_004108924.1	PFAM: thioesterase superfamily protein; KEGG: pfs:PFLU4203 putative thioesterase
YP_004108925.1	KEGG: bra:BRADO4115 putative haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004108926.1	PFAM: OmpA/MotB domain protein; KEGG: bja:blr3801 chemotaxis protein
YP_004108927.1	PFAM: type IV pilus assembly PilZ; KEGG: bja:bsr0173 hypothetical protein
YP_004108928.1	PFAM: heat shock protein Hsp20; KEGG: pde:Pden_3146 heat shock protein HSP20
YP_004108929.1	KEGG: nwi:Nwi_1114 hypothetical protein
YP_004108930.1	KEGG: bja:blr3815 putative cation-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004108931.1	KEGG: bja:blr4811 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region
YP_004108932.1	KEGG: bra:BRADO4110 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase
YP_004108933.1	TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: nha:Nham_1734 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like
YP_004108934.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bja:blr4808 peptidyl-prolyl cis-trans isomerse
YP_004108935.1	TIGRFAM: triosephosphate isomerase; KEGG: bja:bll4807 triosephosphate isomerase; PFAM: triosephosphate isomerase
YP_004108936.1	KEGG: bbt:BBta_4477 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit
YP_004108937.1	TIGRFAM: CTP synthase; KEGG: bja:bll4805 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I
YP_004108938.1	PFAM: PAAR repeat-containing protein; KEGG: nwi:Nwi_1832 hypothetical protein
YP_004108939.1	KEGG: avi:Avi_9163 hypothetical protein
YP_004108940.1	KEGG: mex:Mext_0337 hypothetical protein
YP_004108941.1	PFAM: protein of unknown function DUF497; KEGG: swi:Swit_1213 hypothetical protein
YP_004108942.1	PFAM: NIPSNAP family containing protein; KEGG: bbt:BBta_4475 hypothetical protein
YP_004108943.1	KEGG: oca:OCAR_6297 hypothetical protein
YP_004108944.1	TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; KEGG: bra:BRADO4101 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004108945.1	PFAM: glycosyl transferase family 2; KEGG: bra:BRADO1946 glucosyltransferase MdoH
YP_004108946.1	PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: bja:bll8054 glucan biosynthesis protein G
YP_004108947.1	TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: bbt:BBta_4472 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_004108948.1	TIGRFAM: enolase; KEGG: bbt:BBta_4471 phosphopyruvate hydratase; PFAM: Enolase-like
YP_004108949.1	PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_4470 alcohol dehydrogenase-like protein
YP_004108950.1	KEGG: lch:Lcho_0484 FkbM family methyltransferase
YP_004108951.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ote:Oter_2195 lysine exporter protein LysE/YggA
YP_004108952.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_3236 L-carnitine dehydratase/bile acid-inducible protein F
YP_004108953.1	PFAM: NADPH-dependent FMN reductase; KEGG: nha:Nham_1747 NADPH-dependent FMN reductase
YP_004108954.1	PFAM: Septum formation initiator; KEGG: bja:bll4786 hypothetical protein
YP_004108955.1	KEGG: bra:BRADO4087 pyruvate dehydrogenase E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component
YP_004108956.1	PFAM: Transketolase central region; biotin/lipoyl attachment domain-containing protein; Transketolase domain protein; KEGG: bra:BRADO4086 pyruvate dehydrogenase subunit beta
YP_004108957.1	KEGG: bbt:BBta_4461 hypothetical protein
YP_004108958.1	TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; KEGG: nha:Nham_1751 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein
YP_004108959.1	KEGG: bja:bll4778 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region
YP_004108960.1	KEGG: nha:Nham_1754 Sel1-like; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein
YP_004108961.1	KEGG: bja:blr4761 exonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_004108962.1	KEGG: met:M446_3173 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004108963.1	KEGG: pst:PSPTO_2262 hypothetical protein
YP_004108964.1	KEGG: pst:PSPTO_2262 hypothetical protein
YP_004108965.1	PFAM: neurotransmitter-gated ion-channel ligand-binding; KEGG: fph:Fphi_0374 hypothetical protein
YP_004108966.1	KEGG: bja:blr7173 putative methyl accepting chemotaxis protein
YP_004108967.1	KEGG: nha:Nham_1756 HesB/YadR/YfhF; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein
YP_004108968.1	TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bja:bll4758 deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region
YP_004108969.1	TIGRFAM: arginyl-tRNA synthetase; KEGG: nha:Nham_1758 arginyl-tRNA synthetase
YP_004108970.1	PFAM: Sporulation domain protein; KEGG: bja:bll4755 hypothetical protein
YP_004108971.1	PFAM: glycoside hydrolase family 3 domain protein; KEGG: bja:bll4754 glycosyl hydrolase
YP_004108972.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: nwi:Nwi_1804 chromosome segregation and condensation protein ScpA
YP_004108973.1	KEGG: bbt:BBta_4418 condensin subunit ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB
YP_004108974.1	KEGG: bbt:BBta_4417 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106
YP_004108975.1	manually curated; TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: bja:bll4750 putative sec-independent protein translocase protein; PFAM: sec-independent translocation protein mttA/Hcf106
YP_004108976.1	KEGG: bja:bll4749 sec-independent protein translocase protein; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase
YP_004108977.1	KEGG: mrd:Mrad2831_1933 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein
YP_004108978.1	TIGRFAM: seryl-tRNA synthetase; KEGG: nha:Nham_1791 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like
YP_004108979.1	PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mpt:Mpe_A0536 putative cytidine deaminase
YP_004108980.1	PFAM: SCP-like extracellular; KEGG: bbt:BBta_6058 hypothetical protein
YP_004108981.1	KEGG: bbt:BBta_4412 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE
YP_004108982.1	KEGG: bbt:BBta_4411 putative response regulator receiver (CheY-like protein); PFAM: response regulator receiver; SMART: response regulator receiver
YP_004108983.1	TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: bja:bll474 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004108984.1	KEGG: nha:Nham_1795 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM
YP_004108985.1	PFAM: porin; KEGG: oca:OCAR_5916 hypothetical protein
YP_004108986.1	PFAM: protein of unknown function DUF815; KEGG: bra:BRADO4038 putative ATPase family protein
YP_004108987.1	KEGG: bra:BRADO4036 preprotein translocase (YajC); TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein
YP_004108988.1	KEGG: nha:Nham_1799 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein
YP_004108989.1	KEGG: nha:Nham_1800 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein
YP_004108990.1	PFAM: protein of unknown function DUF498; KEGG: bbt:BBta_4404 hypothetical protein
YP_004108991.1	PFAM: Squalene/phytoene synthase; KEGG: bra:BRADO4032 putative phytoene synthase (terpenoid synthase)
YP_004108992.1	TIGRFAM: gid protein; KEGG: nha:Nham_1804 tRNA (uracil-5-)-methyltransferase Gid; PFAM: glucose-inhibited division protein A
YP_004108993.1	KEGG: bja:bsr4726 hypothetical protein
YP_004108994.1	PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: bja:blr4723 hypothetical protein
YP_004108995.1	KEGG: bbt:BBta_4393 hypothetical protein
YP_004108996.1	PFAM: thioesterase superfamily protein; KEGG: pla:Plav_2975 thioesterase superfamily protein
YP_004108997.1	KEGG: bja:bsr4721 hypothetical protein
YP_004108998.1	KEGG: bja:blr4716 hypothetical protein
YP_004108999.1	PFAM: Ion transport 2 domain protein; KEGG: mch:Mchl_1249 ion transport 2 domain protein
YP_004109000.1	PFAM: protein of unknown function DUF433; KEGG: rmr:Rmar_0293 protein of unknown function DUF433
YP_004109001.1	KEGG: app:CAP2UW1_4416 hypothetical protein
YP_004109002.1	KEGG: bja:bll5899 hypothetical protein
YP_004109003.1	PFAM: protein of unknown function DUF433; KEGG: bja:bsl4703 hypothetical protein
YP_004109004.1	KEGG: slt:Slit_0676 hypothetical protein
YP_004109005.1	KEGG: nhl:Nhal_3480 hypothetical protein
YP_004109006.1	KEGG: conserved domain-containing protein
YP_004109007.1	KEGG: bbt:BBta_4379 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related
YP_004109008.1	KEGG: nha:Nham_2080 putative outer-membrane protein precursor
YP_004109009.1	KEGG: nha:Nham_2079 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n
YP_004109010.1	KEGG: rbi:RB2501_12067 hypothetical protein
YP_004109011.1	PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bbt:BBta_7487 hypothetical protein
YP_004109012.1	KEGG: nha:Nham_1845 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase
YP_004109013.1	KEGG: bja:blr4495 hypothetical protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like
YP_004109014.1	PFAM: beta-lactamase; KEGG: bja:blr5541 hypothetical protein
YP_004109015.1	KEGG: mlo:mll2082 hypothetical protein
YP_004109016.1	KEGG: bja:bll4496 hypothetical protein
YP_004109017.1	KEGG: bbt:BBta_4084 nitrile hydratase subunit beta (nitrilase) (NHase)
YP_004109018.1	TIGRFAM: nitrile hydratase, alpha subunit; KEGG: bbt:BBta_4085 nitrile hydratase subunit alpha (nitrilase) (NHase); PFAM: Nitrile hydratase alpha chain
YP_004109019.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_1123 enoyl-CoA hydratase/isomerase
YP_004109020.1	PFAM: Putative mono-oxygenase ydhR; KEGG: gvi:gll2745 hypothetical protein
YP_004109021.1	PFAM: UvrD/REP helicase; KEGG: nha:Nham_3768 UvrD/REP helicase
YP_004109022.1	PFAM: Collagen triple helix repeat; KEGG: mno:Mnod_4914 collagen triple helix repeat protein
YP_004109023.1	KEGG: sus:Acid_7087 beta-lactamase
YP_004109024.1	TIGRFAM: pyridoxal kinase; KEGG: rru:Rru_A1145 pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_004109025.1	KEGG: rru:Rru_A1144 benzoate membrane transport protein; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein
YP_004109026.1	KEGG: rru:Rru_A1143 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH
YP_004109027.1	KEGG: rru:Rru_A1142 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase
YP_004109028.1	PFAM: alanine racemase domain protein; KEGG: rru:Rru_A1141 hypothetical protein
YP_004109029.1	KEGG: rhi:NGR_c29730 pH adaptation potassium efflux system protein G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit
YP_004109030.1	PFAM: multiple resistance and pH regulation protein F; KEGG: atc:AGR_C_896 multicomponent K+:H+ antiporter subunit F
YP_004109031.1	PFAM: cation antiporter; KEGG: nha:Nham_1007 putative monovalent cation/H+ antiporter subunit E
YP_004109032.1	KEGG: nha:Nham_1008 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_004109033.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: oca:OCAR_5198 putative monovalent cation/H+ antiporter subunit C
YP_004109034.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; Na+/H+ antiporter MnhB subunit-related protein; KEGG: nha:Nham_1010 putative monovalent cation/H+ antiporter subunit A
YP_004109035.1	KEGG: nha:Nham_2830 hypothetical protein
YP_004109036.1	PFAM: metallophosphoesterase; KEGG: nha:Nham_2831 metallophosphoesterase
YP_004109037.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ajs:Ajs_3697 NAD(P)H dehydrogenase (quinone)
YP_004109038.1	KEGG: bja:blr4511 ABC transporter substrate-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7
YP_004109039.1	PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bbt:BBta_4095 TRAP-type C4-dicarboxylate transporter small and large permease
YP_004109040.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_4096 acyl-CoA synthetase
YP_004109041.1	KEGG: nha:Nham_2006 hypothetical protein
YP_004109042.1	KEGG: nwi:Nwi_1461 TatD-related deoxyribonuclease; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease
YP_004109043.1	KEGG: bja:bll4516 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M)
YP_004109044.1	KEGG: bbt:BBta_4101 DNA polymerase III subunit delta'
YP_004109045.1	TIGRFAM: thymidylate kinase; KEGG: bja:bll4518 thymidylate kinase; PFAM: thymidylate kinase
YP_004109046.1	KEGG: bbt:BBta_4103 putative serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein
YP_004109047.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:blr4520 epoxide hydrolase
YP_004109048.1	KEGG: nha:Nham_2012 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A
YP_004109049.1	PFAM: protein of unknown function UPF0118; KEGG: bbt:BBta_4585 putative transport protein/permease
YP_004109050.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bbt:BBta_4588 hypothetical protein
YP_004109051.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:bll4961 hypothetical protein; SMART: GGDEF domain containing protein
YP_004109052.1	KEGG: rle:RL2002 putative transposase-related protein; manually curated; PFAM: transposase IS4 family protein
YP_004109053.1	PFAM: ribosomal protein S9; KEGG: bbt:BBta_4591 30S ribosomal protein S9
YP_004109054.1	KEGG: nha:Nham_2455 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13
YP_004109055.1	PFAM: thioesterase superfamily protein; KEGG: bja:bll4964 hypothetical protein
YP_004109056.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr4965 enoyl-CoA hydratase
YP_004109057.1	KEGG: bja:blr4966 hypothetical protein
YP_004109058.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bja:blr4967 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_004109059.1	PFAM: protein of unknown function DUF1211; KEGG: bra:BRADO3012 hypothetical protein
YP_004109060.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pzu:PHZ_c1556 threonine dehydrogenase
YP_004109061.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_0924 short chain dehydrogenase/reductase family oxidoreductase
YP_004109062.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: mjl:Mjls_2332 thiamine pyrophosphate binding domain-containing protein
YP_004109063.1	PFAM: regulatory protein TetR; KEGG: cyn:Cyan7425_2726 transcriptional regulator, TetR family
YP_004109064.1	PFAM: cytochrome oxidase assembly; KEGG: bja:bll4968 cytochrome oxidase assembly factor
YP_004109065.1	KEGG: bra:BRADO4226 hypothetical protein
YP_004109066.1	KEGG: bra:BRADO1425 putative signal peptide
YP_004109067.1	PFAM: Ferritin Dps family protein; KEGG: eba:ebA1978 DNA-binding ferritin-like protein (oxidative damage protectant)
YP_004109068.1	KEGG: mag:amb2822 cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase
YP_004109069.1	PFAM: NapC/NirT cytochrome c domain protein; KEGG: rru:Rru_A1283 membrane-bound tetrahaem cytochrome TorC/YecK
YP_004109070.1	PFAM: polysaccharide deacetylase; KEGG: bra:BRADO4227 putative polysaccharide deacetylase
YP_004109071.1	KEGG: bbt:BBta_4604 hypothetical protein
YP_004109072.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: bbt:BBta_4605 polysaccharide biosynthesis transporter
YP_004109073.1	PFAM: glycosyl transferase group 1; KEGG: nwi:Nwi_1413 glycosyl transferase, group 1
YP_004109074.1	KEGG: bra:BRADO4231 putative sugar transferase family protein; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase
YP_004109075.1	PFAM: protein of unknown function DUF169; KEGG: bja:bll4979 hypothetical protein
YP_004109076.1	KEGG: bcv:Bcav_1078 protein of unknown function DUF418
YP_004109077.1	KEGG: bbt:BBta_7560 hypothetical protein
YP_004109078.1	KEGG: bja:bll5018 hypothetical protein; PFAM: regulatory protein MerR; SMART: regulatory protein MerR
YP_004109079.1	TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: nwi:Nwi_1408 integration host factor subunit alpha; SMART: histone family protein DNA-binding protein
YP_004109080.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: nha:Nham_1586 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_004109081.1	KEGG: nha:Nham_1585 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein
YP_004109082.1	PFAM: protein of unknown function DUF177; KEGG: nha:Nham_1584 hypothetical protein
YP_004109083.1	PFAM: Ubiquinol-cytochrome c chaperone/UPF0174; KEGG: nha:Nham_1583 ubiquinol-cytochrome c chaperone
YP_004109084.1	PFAM: SmpA/OmlA domain protein; KEGG: bja:blr5024 hypothetical protein
YP_004109085.1	PFAM: alpha/beta hydrolase fold; KEGG: noc:Noc_0991 alpha/beta hydrolase fold
YP_004109086.1	KEGG: bbt:BBta_7678 hypothetical protein
YP_004109087.1	KEGG: hmu:Hmuk_1635 methyl-accepting chemotaxis sensory transducer
YP_004109088.1	TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: oca:OCAR_5867 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase
YP_004109089.1	TIGRFAM: thiamine-monophosphate kinase; KEGG: nha:Nham_1820 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein
YP_004109090.1	KEGG: bja:bll5028 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44
YP_004109091.1	TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: nha:Nham_1818 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase
YP_004109092.1	TIGRFAM: riboflavin synthase, alpha subunit; KEGG: bja:bll5030 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein
YP_004109093.1	TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: bja:bll5031 riboflavin biosynthesis protein; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding
YP_004109094.1	PFAM: ATP-cone domain protein; KEGG: nha:Nham_1815 transcriptional regulator NrdR
YP_004109095.1	KEGG: bja:bll5033 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase
YP_004109096.1	PFAM: Rv0623 family protein transcription factor; KEGG: mno:Mnod_8286 Rv0623 family protein transcription factor
YP_004109097.1	PFAM: PilT protein domain protein; KEGG: mno:Mnod_8285 PilT protein domain protein
YP_004109098.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: pzu:PHZ_c2830 hypothetical protein
YP_004109099.1	KEGG: hba:Hbal_0687 hypothetical protein
YP_004109100.1	PFAM: Glutathione S-transferase domain; KEGG: nha:Nham_2099 putative glutathione S-transferase YghU
YP_004109101.1	PFAM: globin; KEGG: bbt:BBta_6298 hypothetical protein
YP_004109102.1	KEGG: msl:Msil_2979 hypothetical protein
YP_004109103.1	KEGG: bja:bsl5034 hypothetical protein
YP_004109104.1	KEGG: bja:bsl5035 hypothetical protein
YP_004109105.1	KEGG: bbt:BBta_4653 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004109106.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rer:RER_13820 acyl-CoA synthetase
YP_004109107.1	KEGG: bra:BRADO4435 hypothetical protein
YP_004109108.1	KEGG: bra:BRADO4436 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase
YP_004109109.1	PFAM: RDD domain containing protein; KEGG: nha:Nham_2241 hypothetical protein
YP_004109110.1	PFAM: Arginine-tRNA-protein transferase domain protein; KEGG: bja:blr5039 arginyl-tRNA-protein transferase
YP_004109111.1	PFAM: secretion protein HlyD family protein; KEGG: rce:RC1_2575 HlyD family secretion protein
YP_004109112.1	PFAM: protein of unknown function DUF1656; KEGG: rce:RC1_2576 hypothetical protein
YP_004109113.1	PFAM: Fusaric acid resistance protein conserved region; KEGG: rce:RC1_2577 fusaric acid resistance protein, putative
YP_004109114.1	KEGG: rce:RC1_2578 transcriptional regulator, AraC family protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004109115.1	manually curated; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; KEGG: oca:OCAR_5850 manganese transport protein MntH; PFAM: natural resistance-associated macrophage protein
YP_004109116.1	KEGG: cre:CHLREDRAFT_166702 hypothetical protein
YP_004109117.1	PFAM: Citrate transporter; KEGG: bja:bll7122 hypothetical protein
YP_004109118.1	SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: bja:bll5057 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller
YP_004109119.1	PFAM: helix-turn-helix HxlR type; KEGG: mrd:Mrad2831_0163 HxlR family transcriptional regulator
YP_004109120.1	PFAM: Male sterility domain; KEGG: pna:Pnap_0622 NmrA family protein
YP_004109121.1	PFAM: regulatory protein TetR; KEGG: tcu:Tcur_2560 transcriptional regulator, TetR family
YP_004109122.1	PFAM: Glutathione S-transferase domain; KEGG: reh:H16_A0176 glutathione S-transferase
YP_004109123.1	KEGG: nha:Nham_2248 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO
YP_004109124.1	KEGG: bja:bll5059 hypothetical protein
YP_004109125.1	KEGG: nha:Nham_2250 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein
YP_004109126.1	SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: bra:BRADO4463 ribonuclease III (modular protein); PFAM: ribonuclease III; double-stranded RNA binding domain protein
YP_004109127.1	TIGRFAM: signal peptidase I; KEGG: nwi:Nwi_1919 peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region
YP_004109128.1	KEGG: bra:BRADO4466 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase
YP_004109129.1	TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: bja:bll5064 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ
YP_004109130.1	SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: bra:BRADO4468 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase); PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein
YP_004109131.1	KEGG: oca:OCAR_5837 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6
YP_004109132.1	KEGG: bja:blr5067 hypothetical protein
YP_004109133.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: nha:Nham_2258 uracil-DNA glycosylase superfamily protein
YP_004109134.1	PFAM: Redoxin domain protein; KEGG: bja:bll5069 BcpB protein
YP_004109135.1	KEGG: nha:Nham_2260 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein
YP_004109136.1	KEGG: bja:bll5071 mechanosensitive channel-like protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel
YP_004109137.1	KEGG: nha:Nham_2262 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase
YP_004109138.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: bra:BRADO3800 hypothetical protein
YP_004109139.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: bbt:BBta_4131 hypothetical protein
YP_004109140.1	KEGG: nha:Nham_2040 hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1
YP_004109141.1	TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: nha:Nham_2041 allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2
YP_004109142.1	PFAM: LamB/YcsF family protein; KEGG: bja:blr4568 LamB/YcsF family protein
YP_004109143.1	manually curated; KEGG: oca:OCAR_6853 probable arylformamidase (kynurenine formamidase) (KF)
YP_004109144.1	KEGG: mms:mma_3084 sulfonate/nitrate transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109145.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mms:mma_3085 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
YP_004109146.1	SMART: extracellular solute-binding protein family 3; KEGG: mms:mma_3086 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component
YP_004109147.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_1913 LysR family transcriptional regulator
YP_004109148.1	TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: bra:BRADO3790 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB
YP_004109149.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:bll4583 quinone oxidoreductase
YP_004109150.1	PFAM: Integral membrane protein TerC; KEGG: bbt:BBta_4147 hypothetical protein
YP_004109151.1	KEGG: nha:Nham_2046 phosphatidylcholine synthase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004109152.1	KEGG: bja:blr4586 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_004109153.1	PFAM: Auxin Efflux Carrier; KEGG: bja:bll4587 malonate transporter
YP_004109154.1	KEGG: bja:blr4588 hypothetical protein; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region
YP_004109155.1	PFAM: Invasion associated locus B family protein; KEGG: bja:bll4589 hypothetical protein
YP_004109156.1	PFAM: extracellular solute-binding protein family 5; KEGG: nwi:Nwi_1510 extracellular solute-binding protein
YP_004109157.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr4591 hypothetical protein
YP_004109158.1	KEGG: nha:Nham_2052 hypothetical protein
YP_004109159.1	TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: bra:BRADO3771 transcription repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein
YP_004109160.1	PFAM: protein of unknown function DUF339; KEGG: bja:bsl4602 hypothetical protein
YP_004109161.1	KEGG: nha:Nham_2055 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_004109162.1	PFAM: protein of unknown function DUF502; KEGG: nha:Nham_2056 hypothetical protein
YP_004109163.1	KEGG: bra:BRADO3763 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS)
YP_004109164.1	KEGG: nha:Nham_1784 nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein
YP_004109165.1	PFAM: Sporulation domain protein; KEGG: nha:Nham_1783 hypothetical protein
YP_004109166.1	KEGG: nha:Nham_1782 hypothetical protein
YP_004109167.1	KEGG: bra:BRADO3757 putative beta (1-6) glucans synthase, NdvC-like
YP_004109168.1	manually curated; KEGG: nha:Nham_1780 hypothetical protein
YP_004109169.1	KEGG: nha:Nham_1779 glycosyl transferase family protein; manually curated; PFAM: glycosyl transferase family 2
YP_004109170.1	PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_3081 light harvesting protein B-800-850
YP_004109171.1	PFAM: antenna complex alpha/beta subunit; KEGG: hha:Hhal_1408 antenna complex, alpha/beta subunit
YP_004109172.1	KEGG: bbt:BBta_4350 hypothetical protein
YP_004109173.1	PFAM: Endoribonuclease L-PSP; KEGG: bja:bll4678 hypothetical protein
YP_004109174.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr4679 hypothetical protein
YP_004109175.1	KEGG: nha:Nham_1774 hypothetical protein
YP_004109176.1	KEGG: bbt:BBta_4362 hypothetical protein
YP_004109177.1	KEGG: bfl:Bfl351 threonyl-tRNA synthetase
YP_004109178.1	PFAM: Camphor resistance CrcB protein; KEGG: bja:bll2639 hypothetical protein
YP_004109179.1	PFAM: protein of unknown function DUF190; Camphor resistance CrcB protein; KEGG: rsq:Rsph17025_3454 hypothetical protein
YP_004109180.1	PFAM: protein of unknown function DUF190; KEGG: bja:bll2637 hypothetical protein
YP_004109181.1	TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: bja:bll4683 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase
YP_004109182.1	KEGG: nha:Nham_1770 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein
YP_004109183.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bra:BRADO3995 peptidyl prolyl cis-trans isomerase (rotamase B)
YP_004109184.1	KEGG: nha:Nham_1768 hypothetical protein
YP_004109185.1	PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bbt:BBta_4368 peptidyl-prolyl cis-trans isomerase A (rotamase A)
YP_004109186.1	TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: nha:Nham_1766 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase
YP_004109187.1	KEGG: nha:Nham_1765 hypothetical protein
YP_004109188.1	SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: bra:BRADO3999 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller
YP_004109189.1	KEGG: nha:Nham_1842 GTP-binding protein, HSR1-related; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related
YP_004109190.1	KEGG: bja:bsr4491 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core
YP_004109191.1	PFAM: aminotransferase class IV; KEGG: nwi:Nwi_1448 D-amino acid aminotransferase
YP_004109192.1	KEGG: bbt:BBta_4072 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_004109193.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: oca:OCAR_6097 nitrogen regulation protein NtrY; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein
YP_004109194.1	TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: bbt:BBta_4070 nitrogen metabolism transcriptional regulator NtrC; SMART: response regulator receiver; AAA ATPase
YP_004109195.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bra:BRADO3867 nitrogen regulation protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_004109196.1	manually curated; TIGRFAM: TIM-barrel protein, nifR3 family; KEGG: bja:blr4486 nitrogen regulation protein; PFAM: dihydrouridine synthase DuS
YP_004109197.1	KEGG: nha:Nham_1834 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
YP_004109198.1	PFAM: CinA domain protein; KEGG: nha:Nham_1833 CinA-like
YP_004109199.1	PFAM: cyclase/dehydrase; KEGG: nha:Nham_1832 cyclase/dehydrase
YP_004109200.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: nwi:Nwi_1439 lipoyl synthase; PFAM: Radical SAM domain protein
YP_004109201.1	KEGG: nwi:Nwi_1438 3-methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG)
YP_004109202.1	KEGG: gur:Gura_0796 hypothetical protein
YP_004109203.1	KEGG: nha:Nham_1828 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase
YP_004109204.1	PFAM: Protein of unknown function DUF2497; KEGG: bja:blr4474 hypothetical protein
YP_004109205.1	KEGG: nha:Nham_1826 type I secretion outer membrane protein, TolC; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein
YP_004109206.1	PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: nha:Nham_1787 protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004109207.1	KEGG: bra:BRADO3004 putative signal peptide
YP_004109208.1	KEGG: bbt:BBta_3938 hypothetical protein
YP_004109209.1	KEGG: azl:AZL_019960 alginate O-acetyltransferase
YP_004109210.1	PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: azl:AZL_019970 membrane bound O-acyl transferase
YP_004109211.1	PFAM: DTW domain containing protein; KEGG: nha:Nham_2062 hypothetical protein
YP_004109212.1	PFAM: acriflavin resistance protein; KEGG: nha:Nham_2063 acriflavin resistance protein
YP_004109213.1	PFAM: acriflavin resistance protein; KEGG: bja:blr4457 AcrB/AcrD/AcrF family protein
YP_004109214.1	KEGG: bbt:BBta_3932 multidrug resistance protein MdtA precursor; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004109215.1	KEGG: nha:Nham_2066 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein
YP_004109216.1	PFAM: amine oxidase; KEGG: bbt:BBta_3930 hypothetical protein
YP_004109217.1	PFAM: protein of unknown function DUF1365; KEGG: bra:BRADO3907 hypothetical protein
YP_004109218.1	KEGG: bbt:BBta_3928 putative cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004109219.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: oca:OCAR_6061 cysteine synthase A
YP_004109220.1	KEGG: cai:Caci_7102 hypothetical protein
YP_004109221.1	KEGG: bra:BRADO3910 putative amino acid transport protein, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109222.1	KEGG: nha:Nham_2069 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004109223.1	KEGG: nha:Nham_2070 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004109224.1	TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bra:BRADO3913 putative amino-acid ABC transporter, substrate-binding protein; SMART: extracellular solute-binding protein family 3
YP_004109225.1	KEGG: bra:BRADO3914 cystathionine beta-lyase, PLP-dependent (beta-cystathionase); TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_004109226.1	PFAM: lipid A biosynthesis domain protein; KEGG: oca:OCAR_6054 lipid A biosynthesis domain protein
YP_004109227.1	PFAM: glycosyl transferase family 2; KEGG: nha:Nham_2075 glycosyl transferase family protein
YP_004109228.1	KEGG: bja:blr4441 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related
YP_004109229.1	PFAM: glycosyl transferase family 39; KEGG: bbt:BBta_3917 glycosyl transferase family protein 39
YP_004109230.1	TIGRFAM: penicillin-binding protein 1C; KEGG: nha:Nham_2077 penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein
YP_004109231.1	PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: nha:Nham_2078 alpha-2-macroglobulin-like
YP_004109232.1	KEGG: pfl:PFL_2817 hypothetical protein
YP_004109233.1	KEGG: bja:blr5152 hypothetical protein
YP_004109234.1	KEGG: bpt:Bpet4408 hypothetical protein
YP_004109235.1	PFAM: protein of unknown function DUF1212; KEGG: hypothetical protein
YP_004109236.1	PFAM: protein of unknown function DUF1212; KEGG: hypothetical protein
YP_004109237.1	KEGG: met:M446_4370 triple helix repeat-containing collagen
YP_004109238.1	KEGG: bja:blr2405 peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type
YP_004109239.1	KEGG: nha:Nham_2176 hypothetical protein
YP_004109240.1	TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: dac:Daci_3133 pentapeptide MXKDX repeat-containing protein
YP_004109241.1	PFAM: pyruvate carboxyltransferase; KEGG: bja:blr4422 hydroxymethylglutaryl-CoA lyase
YP_004109242.1	PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: bja:blr4421 3-methylcrotonyl-CoA carboxylase alpha subunit
YP_004109243.1	KEGG: nha:Nham_2125 propionyl-CoA carboxylase; PFAM: carboxyl transferase
YP_004109244.1	PFAM: ETC complex I subunit conserved region; KEGG: bra:BRADO3676 putative ETC complex I subunit region protein (fragment)
YP_004109245.1	PFAM: conserved hypothetical protein; KEGG: bja:bll4413 hypothetical protein
YP_004109246.1	PFAM: glycosyl transferase group 1; KEGG: cja:CJA_0504 glycosyl transferase, putative, gt4E
YP_004109247.1	PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mdi:METDI0840 putative phage integrase
YP_004109248.1	PFAM: integrase family protein; KEGG: azc:AZC_3570 putative phage HP1 integrase
YP_004109249.1	KEGG: met:M446_4953 MarR family transcriptional regulator
YP_004109250.1	manually curated; KEGG: mjl:Mjls_3915 stage II sporulation E family protein
YP_004109251.1	PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein
YP_004109253.1	KEGG: rba:RB1579 thermostable carboxypeptidase 1
YP_004109254.1	KEGG: rcu:RCOM_1585570 hypothetical protein
YP_004109255.1	KEGG: tai:Taci_1729 hypothetical protein
YP_004109256.1	KEGG: tgu:100226749 homeodomain protein
YP_004109257.1	PFAM: Tail Collar domain protein; KEGG: pap:PSPA7_5071 putative tail fiber protein
YP_004109258.1	KEGG: apb:SAR116_0382 hypothetical genomic island protein
YP_004109260.1	KEGG: dre:567922 similar to LReO_3
YP_004109261.1	KEGG: rlt:Rleg2_1152 hypothetical protein
YP_004109262.1	KEGG: ote:Oter_1689 cell wall surface anchor family protein
YP_004109263.1	KEGG: cbc:CbuK_0677 valyl-tRNA synthetase
YP_004109264.1	KEGG: apb:SAR116_0377 hypothetical protein
YP_004109265.1	KEGG: apb:SAR116_0376 putative portal protein
YP_004109266.1	KEGG: gbr:Gbro_2152 translation initiation factor IF-2
YP_004109267.1	KEGG: pdi:BDI_0630 dihydroxyacetone kinase
YP_004109268.1	KEGG: apb:SAR116_0374 hypothetical protein
YP_004109269.1	KEGG: hth:HTH_0548 putative phage major head protein
YP_004109270.1	KEGG: apb:SAR116_0372 acriflavin resistance protein
YP_004109271.1	KEGG: apb:SAR116_0371 hypothetical protein
YP_004109272.1	KEGG: zro:ZYRO0F02728g hypothetical protein
YP_004109273.1	KEGG: bav:BAV1476 phage protein
YP_004109274.1	PFAM: glycoside hydrolase family 24; KEGG: mag:amb1525 phage-related lysozyme
YP_004109275.1	KEGG: chl:Chy400_0986 hypothetical protein
YP_004109276.1	KEGG: xau:Xaut_4507 hypothetical protein
YP_004109277.1	KEGG: sps:SPs1725 M protein type 3
YP_004109278.1	manually curated; KEGG: rme:Rmet_2265 hypothetical protein
YP_004109279.1	KEGG: sbi:SORBI_06g026970 hypothetical protein
YP_004109282.1	PFAM: 20S proteasome A and B subunits; KEGG: ppg:PputGB1_3423 20S proteasome A and B subunits
YP_004109283.1	KEGG: smt:Smal_0900 hypothetical protein
YP_004109285.1	KEGG: ppu:PP_2272 hypothetical protein
YP_004109287.1	KEGG: bpl:BURPS1106A_2403 hypothetical protein
YP_004109288.1	KEGG: ttj:TTHA1835 NADH oxidase
YP_004109289.1	KEGG: apb:SAR116_0390 putative phage exonuclease; PFAM: 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2
YP_004109291.1	KEGG: dar:Daro_0434 hypothetical protein
YP_004109292.1	KEGG: ppu:PP_2273 DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase
YP_004109295.1	KEGG: ppp:PHYPADRAFT_231479 hypothetical protein
YP_004109296.1	KEGG: azc:AZC_3598 DNA primase
YP_004109297.1	manually curated; KEGG: xce:Xcel_0567 hypothetical protein
YP_004109299.1	KEGG: azc:AZC_3600 hypothetical protein
YP_004109300.1	PFAM: pentapeptide repeat protein; KEGG: cyn:Cyan7425_5254 pentapeptide repeat protein
YP_004109301.1	KEGG: scl:sce6798 anti-anti sigma factor protein
YP_004109302.1	PFAM: endonuclease I; KEGG: ppu:PP_2268 phage endodeoxyribonuclease I
YP_004109303.1	KEGG: apb:SAR116_0394 possible DNA-dependent RNA polymerase
YP_004109304.1	KEGG: sbi:SORBI_03g027965 hypothetical protein
YP_004109306.1	KEGG: ppu:PP_2266 DNA-directed RNA polymerase, bacteriophage and mitochondrial type; PFAM: DNA-directed RNA polymerase bacteriophage type
YP_004109307.1	PFAM: protein of unknown function DUF192; KEGG: bja:blr4411 hypothetical protein
YP_004109308.1	KEGG: bja:blr4410 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein
YP_004109309.1	PFAM: Silent information regulator protein Sir2; KEGG: bja:blr4409 hypothetical protein
YP_004109310.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nha:Nham_2145 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004109311.1	PFAM: type IV pilus assembly PilZ; KEGG: bra:BRADO3661 hypothetical protein
YP_004109312.1	KEGG: cac:CAC0259 fusion NifN/K+nifB (NifN-nitrogenase iron molybdenum cofactor biosinthesis protein, NifK-nitrogenase molibdenum-iron protein beta chain, NifB-nitrogenase iron-molibdenum cofactor biosynthesis protein)
YP_004109313.1	KEGG: nha:Nham_2298 hypothetical protein
YP_004109314.1	KEGG: nha:Nham_2299 hypothetical protein
YP_004109315.1	TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: nha:Nham_2300 hypothetical protein; PFAM: Radical SAM domain protein
YP_004109316.1	KEGG: bbt:BBta_4013 putative lysyl-tRNA synthetase (lysine--tRNA ligase); TIGRFAM: lysyl-tRNA synthetase-related protein GenX; PFAM: tRNA synthetase class II (D K and N)
YP_004109317.1	KEGG: nwi:Nwi_1643 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein
YP_004109318.1	KEGG: bbt:BBta_5358 putative lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region
YP_004109319.1	KEGG: bbt:BBta_4006 putative membrane-bound lytic transglycosylase precursor protein, putative signal peptide; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein
YP_004109320.1	KEGG: dar:Daro_1033 hypothetical protein
YP_004109321.1	KEGG: sme:SMc00611 hypothetical protein
YP_004109322.1	KEGG: bbt:BBta_4000 exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1
YP_004109323.1	KEGG: bja:blr4364 putative haloacid dehalogenase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004109324.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mno:Mnod_3262 GCN5-related N-acetyltransferase
YP_004109325.1	TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: oca:OCAR_6017 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein
YP_004109326.1	PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; KEGG: bbt:BBta_3996 homoserine dehydrogenase
YP_004109327.1	PFAM: aminotransferase class I and II; KEGG: bra:BRADO3571 aminotransferase
YP_004109328.1	KEGG: nha:Nham_2311 hypothetical protein
YP_004109329.1	KEGG: bra:BRADO3568 poly-beta-hydroxybutyrate polymerase; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold
YP_004109330.1	PFAM: Amidase; KEGG: bra:BRADO0324 putative amidase (AmiD)
YP_004109331.1	KEGG: pnu:Pnuc_1180 putative ABC transporter, periplasmic protein
YP_004109332.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pnu:Pnuc_1181 binding-protein-dependent transport systems inner membrane component
YP_004109333.1	KEGG: pnu:Pnuc_1182 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109334.1	KEGG: bph:Bphy_6303 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004109335.1	KEGG: nha:Nham_2503 hypothetical protein
YP_004109336.1	KEGG: azc:AZC_3721 elongator protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004109337.1	PFAM: Methyltransferase type 12; KEGG: atc:AGR_C_4253 hypothetical protein
YP_004109338.1	TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: nha:Nham_2314 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding
YP_004109339.1	PFAM: Negative transcriptional regulator; KEGG: bbt:BBta_3982 negative transcriptional regulator
YP_004109340.1	PFAM: Protein of unknown function DUF2087; KEGG: bid:Bind_2948 hypothetical protein
YP_004109341.1	PFAM: alpha/beta hydrolase fold; KEGG: gau:GAU_0062 putative hydrolase
YP_004109342.1	KEGG: bra:BRADO4092 putative metallo-beta-lactamase family protein
YP_004109343.1	PFAM: SNARE associated Golgi protein; KEGG: bbt:BBta_3981 hypothetical protein
YP_004109344.1	SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: nwi:Nwi_1653 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein
YP_004109345.1	KEGG: nha:Nham_2319 hypothetical protein
YP_004109346.1	KEGG: rru:Rru_A0400 hypothetical protein
YP_004109347.1	PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bbt:BBta_3976 hypothetical protein
YP_004109348.1	KEGG: bra:BRADO2559 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer
YP_004109349.1	KEGG: bja:blr7666 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004109350.1	KEGG: bja:bll4348 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_004109351.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:bll4347 hypothetical protein; SMART: GGDEF domain containing protein
YP_004109352.1	PFAM: TfoX domain protein; KEGG: bra:BRADO3547 hypothetical protein
YP_004109353.1	PFAM: Endoribonuclease L-PSP; KEGG: tmz:Tmz1t_0821 endoribonuclease L-PSP
YP_004109354.1	KEGG: scb:SCAB_78071 hypothetical protein
YP_004109355.1	KEGG: hch:HCH_03141 hypothetical protein
YP_004109356.1	KEGG: nwi:Nwi_1659 HesB/YadR/YfhF; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein
YP_004109357.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: csa:Csal_3007 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004109358.1	KEGG: bja:blr4343 hypothetical protein; TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59
YP_004109359.1	KEGG: bbt:BBta_3969 cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V
YP_004109360.1	KEGG: bra:BRADO3543 SufD, needed for FhuF Fe-S center production/stability; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein
YP_004109361.1	TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: bra:BRADO3542 SufC, related to ABC transporter associated with Fe-S cluster assembly ATP-binding protein; SMART: AAA ATPase
YP_004109362.1	KEGG: bra:BRADO3540 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein
YP_004109363.1	KEGG: bja:blr4338 cysteine desulfurase; PFAM: aminotransferase class V
YP_004109364.1	PFAM: alpha/beta hydrolase fold; KEGG: nwi:Nwi_1666 hypothetical protein
YP_004109365.1	PFAM: protein of unknown function UPF0075; KEGG: nha:Nham_2331 anhydro-N-acetylmuramic acid kinase
YP_004109366.1	TIGRFAM: tyrosyl-tRNA synthetase; KEGG: nwi:Nwi_1668 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib
YP_004109367.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3959 hypothetical protein
YP_004109368.1	KEGG: reh:H16_A3123 cytochrome b561
YP_004109369.1	KEGG: nha:Nham_2333 hypothetical protein
YP_004109370.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bra:BRADO3529 hypothetical protein
YP_004109371.1	PFAM: Peptidase M23; KEGG: bbt:BBta_3955 putative metalloendopeptidase
YP_004109372.1	manually curated; TIGRFAM: peptide chain release factor 2; KEGG: bpm:BURPS1710b_3602 hypothetical protein; PFAM: Class I peptide chain release factor; PCRF domain protein
YP_004109373.1	TIGRFAM: penicillin-binding protein, 1A family; KEGG: nha:Nham_1824 penicillin-binding protein 1A; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_004109374.1	manually curated; PFAM: cell wall hydrolase/autolysin; KEGG: bja:blr4306 putative N-acetylmuramoyl-L-alanine amidase precursor; SMART: cell wall hydrolase/autolysin
YP_004109375.1	KEGG: bja:bll4305 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein
YP_004109376.1	PFAM: sodium:dicarboxylate symporter; KEGG: bra:BRADO3510 C4-dicarboxylate transport protein
YP_004109377.1	PFAM: BioY protein; KEGG: bja:blr4297 hypothetical protein
YP_004109378.1	PFAM: aminotransferase class I and II; KEGG: nha:Nham_2183 aminotransferase, class I and II
YP_004109379.1	PFAM: peptidase M48 Ste24p; KEGG: bja:bll4295 hypothetical protein
YP_004109380.1	PFAM: BA14K family protein; KEGG: nha:Nham_0272 hypothetical protein
YP_004109381.1	KEGG: maq:Maqu_0381 peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like
YP_004109382.1	PFAM: DSBA oxidoreductase; KEGG: nwi:Nwi_1750 DsbA oxidoreductase
YP_004109383.1	PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: bac:BamMC406_0585 TetR family transcriptional regulator
YP_004109384.1	PFAM: cation efflux protein; KEGG: ppw:PputW619_3985 cation efflux protein
YP_004109385.1	KEGG: bbt:BBta_3130 hypothetical protein
YP_004109386.1	TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: nha:Nham_2187 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II
YP_004109387.1	KEGG: bbt:BBta_4215 biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein
YP_004109388.1	KEGG: bbt:BBta_4216 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein
YP_004109389.1	KEGG: bra:BRADO3499 putative two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004109390.1	KEGG: bbt:BBta_4218 putative two-component response regulator/receiver (CheY-like protein); PFAM: response regulator receiver; SMART: response regulator receiver
YP_004109391.1	KEGG: nha:Nham_2192 signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein
YP_004109392.1	KEGG: rlt:Rleg2_5786 hypothetical protein
YP_004109393.1	KEGG: nha:Nham_3404 hypothetical protein
YP_004109394.1	TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: nwi:Nwi_1757 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase
YP_004109395.1	PFAM: Protein of unknown function DUF2155; KEGG: nha:Nham_1811 hypothetical protein
YP_004109396.1	KEGG: bbt:BBta_4223 putative lipase/esterase
YP_004109397.1	KEGG: bja:bll4656 hypothetical protein
YP_004109398.1	KEGG: bbt:BBta_4229 transcriptional regulator; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004109399.1	PFAM: ThiJ/PfpI domain protein; KEGG: bja:bll4280 ThiJ/PfpI family protein
YP_004109400.1	PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: oca:OCAR_6312 NADH dehydrogenase
YP_004109401.1	KEGG: scl:sce6535 putative exported peptidase
YP_004109402.1	PFAM: Lytic transglycosylase catalytic; KEGG: bbt:BBta_4695 putative soluble lytic transglycosylase (SLT)
YP_004109403.1	PFAM: porin; KEGG: bbt:BBta_3063 porin precursor domain-containing protein
YP_004109404.1	KEGG: bbt:BBta_6055 hypothetical protein
YP_004109405.1	KEGG: modB2; molybdate ABC transporter permease ModB-2; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004109406.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: modA2; molybdate ABC transporter periplasmic molybdate-binding   protein ModA-2
YP_004109407.1	KEGG: modC2; molybdate ABC transporter ATP-binding protein ModC-2; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109408.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: acr:Acry_1422 short-chain dehydrogenase/reductase SDR
YP_004109409.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bbt:BBta_3208 putative nitrilase/cyanide hydratase family protein (carbon-nitrogen hydrolase)
YP_004109410.1	PFAM: Acetamidase/Formamidase; KEGG: bbt:BBta_3207 putative acetamidase/formamidase family protein
YP_004109411.1	KEGG: bra:BRADO4854 putative branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109412.1	KEGG: bbt:BBta_3205 putative branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109413.1	PFAM: inner-membrane translocator; KEGG: bra:BRADO4856 branched chain amino acid ABC transporter permease
YP_004109414.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_3203 branched chain amino acid ABC transporter permease
YP_004109415.1	KEGG: bra:BRADO4858 putative aliphatic amidase expression-regulating protein, AmiC; TIGRFAM: urea ABC transporter, substrate-binding protein; PFAM: Extracellular ligand-binding receptor
YP_004109416.1	PFAM: ANTAR domain protein; KEGG: bra:BRADO4859 hypothetical protein
YP_004109417.1	KEGG: bbt:BBta_3200 putative aliphatic amidase expression-regulating protein, AmiC
YP_004109418.1	KEGG: bja:blr5534 hypothetical protein
YP_004109420.1	TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; KEGG: mag:amb1576 ADP-ribosyl-[dinitrogen reductase] glycohydrolase; PFAM: ADP-ribosylation/Crystallin J1
YP_004109421.1	KEGG: mag:amb1575 NAD(+)-dinitrogen-reductase ADP-D-ribosyltransferase; PFAM: Dinitrogenase reductase ADP-ribosyltransferase
YP_004109422.1	KEGG: bja:blr7666 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004109423.1	KEGG: rru:Rru_A0828 CRISPR-associated helicase Cas3 family protein protein; TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; SMART: DEAD-like helicase
YP_004109424.1	KEGG: lif:LinJ27.0410 calpain-like cysteine peptidase
YP_004109425.1	KEGG: rru:Rru_A0830 CRISPR-associated RAMP Csd1 family protein; TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133
YP_004109426.1	KEGG: rru:Rru_A0831 CRISPR-associated Csd2 family protein; TIGRFAM: CRISPR-associated protein, Csd2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801
YP_004109427.1	TIGRFAM: CRISPR-associated protein Cas4; KEGG: rru:Rru_A0832 CRISPR-associated exonuclease Cas4 family protein
YP_004109428.1	KEGG: nwi:Nwi_1936 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48
YP_004109429.1	TIGRFAM: CRISPR-associated protein Cas2; KEGG: rsk:RSKD131_1963 CRISPR-associated protein, Cas2 family
YP_004109430.1	KEGG: rce:RC1_0319 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein
YP_004109431.1	KEGG: pde:Pden_2988 hypothetical protein
YP_004109432.1	KEGG: rce:RC1_0317 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein
YP_004109433.1	KEGG: avn:Avin_49020 sigma54-dependent transcriptional activator for the iron only nitrogenase, AnfA; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase
YP_004109434.1	TIGRFAM: nitrogenase iron protein; KEGG: anfH; nitrogenase iron protein; PFAM: NifH/frxC-family protein
YP_004109435.1	TIGRFAM: nitrogenase iron-iron protein, alpha chain; nitrogenase alpha chain; nitrogenase component I, alpha chain; KEGG: cts:Ctha_1831 nitrogenase alpha chain; PFAM: oxidoreductase/nitrogenase component 1
YP_004109436.1	TIGRFAM: Fe-only nitrogenase, delta subunit; KEGG: rru:Rru_A1393 nitrogenase; PFAM: Vanadium/alternative nitrogenase delta subunit
YP_004109437.1	KEGG: rru:Rru_A1392 nitrogenase; TIGRFAM: Fe-only nitrogenase, beta subunit; PFAM: oxidoreductase/nitrogenase component 1
YP_004109438.1	KEGG: avn:Avin_48960 Fe-only nitrogenase accessory protein AnfO; TIGRFAM: Fe-only nitrogenase accessory protein AnfO; PFAM: Nitrogenase iron-iron accessory protein AnfO
YP_004109439.1	KEGG: rru:Rru_A1390 hypothetical protein
YP_004109440.1	KEGG: cts:Ctha_1834 putative nitroimidazole resistance protein
YP_004109441.1	manually curated; KEGG: mca:MCA1828 dinitrogenase reductase ADP-ribosyltransferase-like protein; PFAM: Dinitrogenase reductase ADP-ribosyltransferase
YP_004109442.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bay:RBAM_024110 YrkN
YP_004109443.1	KEGG: xau:Xaut_2451 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein
YP_004109444.1	KEGG: ara:Arad_9281 multidrug efflux transporter protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein
YP_004109445.1	KEGG: ara:Arad_4545 protein secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004109446.1	KEGG: rlt:Rleg2_2361 hypothetical protein
YP_004109447.1	KEGG: bja:bll3559 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004109448.1	KEGG: bja:bll3558 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein
YP_004109449.1	PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xau:Xaut_1514 flavocytochrome c sulphide dehydrogenase flavin-binding
YP_004109450.1	PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xau:Xaut_1514 flavocytochrome c sulphide dehydrogenase flavin-binding
YP_004109451.1	KEGG: sil:SPO1000 diheme cytochrome c SoxE
YP_004109452.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dar:Daro_3126 YeeE/YedE
YP_004109453.1	KEGG: bra:BRADO3185 putative sulfite oxidase cytochrome subunit (SoxD)
YP_004109454.1	PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: xau:Xaut_1518 oxidoreductase molybdopterin binding
YP_004109455.1	PFAM: 5'-Nucleotidase domain protein; KEGG: xau:Xaut_1519 5'-nucleotidase domain-containing protein
YP_004109456.1	PFAM: Sulphur oxidation protein SoxZ; KEGG: xau:Xaut_1520 sulphur oxidation protein SoxZ
YP_004109457.1	KEGG: xau:Xaut_1521 sulfur oxidation protein SoxY
YP_004109458.1	KEGG: xau:Xaut_1522 hypothetical protein
YP_004109459.1	KEGG: xau:Xaut_1523 hypothetical protein
YP_004109460.1	PFAM: protein of unknown function DUF336; KEGG: mea:Mex_1p2555 hypothetical protein
YP_004109461.1	KEGG: bja:blr3510 thioredoxin
YP_004109462.1	PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mdi:METDI0762 sulfur oxidation V protein, cytochrome c-type biogenesis protein
YP_004109463.1	KEGG: xau:Xaut_1526 hypothetical protein
YP_004109464.1	KEGG: xau:Xaut_1527 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004109465.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: xau:Xaut_1528 protein of unknown function DUF395 YeeE/YedE
YP_004109466.1	KEGG: bra:BRADO1133 YchN-like
YP_004109467.1	PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: oca:OCAR_5191 possible membrane protein with ATP/GTP-binding site motif A
YP_004109468.1	PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: oan:Oant_1901 siderophore-interacting protein
YP_004109469.1	KEGG: gau:GAU_3226 putative iron ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109470.1	PFAM: transport system permease protein; KEGG: gau:GAU_3227 putative iron ABC transporter permease
YP_004109471.1	KEGG: pfl:PFL_3500 solute-binding periplasmic protein of iron/siderophore ABC transporter
YP_004109472.1	PFAM: putative esterase; KEGG: bay:RBAM_029060 YuiI
YP_004109473.1	KEGG: ara:Arad_9688 ferrichrome-iron transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug
YP_004109474.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: oan:Oant_4087 TonB-dependent receptor
YP_004109475.1	KEGG: hch:HCH_01309 AraC-type DNA-binding domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004109476.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sme:SM_b20636 putative transposase of insertion sequence ISRm19 protein
YP_004109477.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB2681 short-chain dehydrogenase
YP_004109478.1	PFAM: AMP-dependent synthetase and ligase; KEGG: azc:AZC_2772 AMP-dependent synthetase
YP_004109479.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ttr:Tter_0818 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004109480.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mrd:Mrad2831_4369 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004109481.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3318 binding-protein-dependent transport systems inner membrane component
YP_004109482.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2651 ABC transporter permease protein
YP_004109483.1	PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_1982 putative ABC transporter, periplasmic binding protein
YP_004109484.1	PFAM: thioesterase superfamily protein; KEGG: bbr:BB1176 hypothetical protein
YP_004109485.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbr:BB0342 zinc-binding dehydrogenase
YP_004109486.1	KEGG: azc:AZC_2262 hypothetical protein
YP_004109487.1	TIGRFAM: amidohydrolase; KEGG: oan:Oant_3314 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_004109488.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: svi:Svir_03020 cysteine synthase
YP_004109489.1	KEGG: sil:SPO3179 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type
YP_004109490.1	KEGG: nwi:Nwi_2907 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004109491.1	KEGG: aeh:Mlg_1777 hypothetical protein
YP_004109492.1	KEGG: nwi:Nwi_2303 fec I like protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein
YP_004109493.1	PFAM: IucA/IucC family protein; KEGG: nwi:Nwi_2302 siderophore synthetase component
YP_004109494.1	PFAM: IucA/IucC family protein; KEGG: nwi:Nwi_2301 siderophore synthetase component
YP_004109495.1	PFAM: AMP-dependent synthetase and ligase; KEGG: nwi:Nwi_2300 acyl-CoA synthetase
YP_004109496.1	KEGG: nwi:Nwi_2299 hypothetical protein
YP_004109497.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: nwi:Nwi_2298 xylose isomerase-like TIM barrel
YP_004109498.1	PFAM: periplasmic binding protein; KEGG: rsp:RSP_3079 ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein
YP_004109499.1	PFAM: transport system permease protein; KEGG: rsp:RSP_3220 ABC ferric siderophore transporter, inner membrane subunit
YP_004109500.1	PFAM: transport system permease protein; KEGG: atc:AGR_C_4491 ferrichrome ABC transporter (permease) homolog
YP_004109501.1	KEGG: rsh:Rsph17029_3961 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109502.1	PFAM: FecR protein; KEGG: nwi:Nwi_2297 FecR protein
YP_004109503.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: nwi:Nwi_2296 TonB-dependent receptor
YP_004109504.1	PFAM: GCN5-related N-acetyltransferase; KEGG: nwi:Nwi_2295 GCN5-related N-acetyltransferase
YP_004109505.1	KEGG: nwi:Nwi_2294 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug
YP_004109506.1	PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_2293 hypothetical protein
YP_004109507.1	PFAM: UspA domain protein; KEGG: pla:Plav_3480 UspA domain-containing protein
YP_004109508.1	PFAM: Citrate transporter; KEGG: aeh:Mlg_1768 citrate transporter
YP_004109509.1	KEGG: nar:Saro_0399 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004109510.1	KEGG: pat:Patl_2284 sodium/hydrogen exchanger
YP_004109511.1	PFAM: protein of unknown function DUF502; KEGG: eba:ebA5013 hypothetical protein
YP_004109512.1	PFAM: cation antiporter; KEGG: msl:Msil_1032 hypothetical protein
YP_004109513.1	KEGG: msl:Msil_1033 hypothetical protein
YP_004109514.1	PFAM: Na+/H+ antiporter subunit; KEGG: hha:Hhal_0816 putative monovalent cation/H+ antiporter subunit G
YP_004109515.1	PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: bja:blr7318 hypothetical protein
YP_004109516.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: msl:Msil_1036 NADH-ubiquinone oxidoreductase chain 4L
YP_004109517.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: msl:Msil_1037 NADH dehydrogenase (quinone)
YP_004109518.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sfr:Sfri_2742 NADH dehydrogenase (quinone)
YP_004109519.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: xau:Xaut_1581 NADH/ubiquinone/plastoquinone (complex I)
YP_004109520.1	KEGG: pmy:Pmen_0826 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein
YP_004109521.1	KEGG: oan:Oant_0375 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004109522.1	PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; KEGG: xca:xccb100_1109 quinoprotein glucose dehydrogenase; SMART: Pyrrolo-quinoline quinone beta-propeller repeat
YP_004109523.1	PFAM: ferric-uptake regulator; KEGG: oca:OCAR_4496 ferric uptake regulator, FUR family
YP_004109524.1	KEGG: eba:ebA616 hypothetical protein
YP_004109525.1	KEGG: eba:ebB16 hypothetical protein
YP_004109526.1	KEGG: avn:Avin_22680 hypothetical protein
YP_004109527.1	KEGG: avn:Avin_22690 hypothetical protein
YP_004109528.1	KEGG: avn:Avin_22700 hypothetical protein
YP_004109529.1	KEGG: eba:ebA609 putative cation transport ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004109530.1	KEGG: mdi:METDI4458 hypothetical protein
YP_004109531.1	KEGG: bja:blr4686 hypothetical protein
YP_004109532.1	PFAM: regulatory protein TetR; KEGG: bja:blr4685 transcriptional regulatory protein
YP_004109533.1	KEGG: tmz:Tmz1t_2068 hypothetical protein
YP_004109534.1	KEGG: azc:AZC_4654 sensor protein FixL; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004109535.1	KEGG: nha:Nham_2169 adenylate/guanylate cyclase; PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase
YP_004109536.1	KEGG: sro:Sros_2899 hypothetical protein
YP_004109537.1	KEGG: nwi:Nwi_1759 hypothetical protein
YP_004109538.1	KEGG: nha:Nham_2170 tetratricopeptide TPR_2
YP_004109539.1	PFAM: Polyketide cyclase/dehydrase; KEGG: fal:FRAAL3046 hypothetical protein
YP_004109540.1	KEGG: hypothetical protein
YP_004109541.1	KEGG: bra:BRADO3737 peptide chain release factor RF-3; GTP-binding factor; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein
YP_004109542.1	PFAM: small multidrug resistance protein; KEGG: nha:Nham_1679 small multidrug resistance protein
YP_004109543.1	PFAM: phosphate transporter; KEGG: nwi:Nwi_2031 phosphate transporter
YP_004109544.1	PFAM: Putitive phosphate transport regulator; KEGG: bbt:BBta_3760 putative low-affinity phosphate transport accessory protein
YP_004109545.1	KEGG: pcs:Pc22g03720 Pc22g03720
YP_004109546.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_3759 hypothetical protein
YP_004109547.1	PFAM: inner-membrane translocator; KEGG: bra:BRADO3733 putative ABC transporter, permease protein; putative branched-chain amino acid transport permease
YP_004109548.1	KEGG: nha:Nham_1673 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109549.1	KEGG: bja:blr4037 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109550.1	PFAM: arsenate reductase and related; KEGG: nha:Nham_1671 hypothetical protein
YP_004109551.1	KEGG: rce:RC1_2401 pyruvate kinase; PFAM: Pyruvate kinase barrel
YP_004109552.1	KEGG: bpt:Bpet2957 hypothetical protein
YP_004109553.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: atc:AGR_L_284 flavin-containing monooxygenase, putative
YP_004109554.1	KEGG: nwi:Nwi_3083 transcriptional regulator AbrB; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein
YP_004109555.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: bbt:BBta_7416 hypothetical protein
YP_004109556.1	KEGG: azl:AZL_a04400 hypothetical protein
YP_004109557.1	KEGG: pde:Pden_3149 phytanoyl-CoA dioxygenase
YP_004109558.1	KEGG: rce:RC1_3304 hypothetical protein
YP_004109559.1	KEGG: azc:AZC_1293 hypothetical protein
YP_004109560.1	KEGG: rsp:RSP_4279 hypothetical protein
YP_004109561.1	KEGG: azc:AZC_1291 transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004109562.1	KEGG: oan:Oant_4810 sodium/glutamate symporter; TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter
YP_004109563.1	PFAM: regulatory protein TetR; KEGG: vap:Vapar_6173 transcriptional regulator, TetR family
YP_004109564.1	KEGG: ara:Arad_0941 hypothetical protein
YP_004109565.1	KEGG: sto:ST0052 hypothetical protein
YP_004109566.1	KEGG: xca:xccb100_4359 hypothetical protein
YP_004109567.1	PFAM: RES domain protein; KEGG: mes:Meso_4398 hypothetical protein
YP_004109568.1	KEGG: mno:Mnod_8614 hypothetical protein
YP_004109569.1	KEGG: tau:Tola_2435 hypothetical protein
YP_004109570.1	KEGG: aca:ACP_3268 hypothetical protein
YP_004109571.1	KEGG: bbt:BBta_2306 AraC/XylS family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004109572.1	PFAM: transposase IS4 family protein; KEGG: nha:Nham_2758 transposase, IS4
YP_004109573.1	KEGG: bja:bll7081 two-component response regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR
YP_004109574.1	PFAM: protein of unknown function DUF937; KEGG: bra:BRADO4558 hypothetical protein
YP_004109575.1	KEGG: mrd:Mrad2831_1030 large conductance mechanosensitive channel protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel
YP_004109576.1	KEGG: dth:DICTH_1205 DNA repair protein RecO
YP_004109577.1	KEGG: bja:blr2546 putative chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004109578.1	KEGG: mag:amb3899 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004109579.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: bbt:BBta_1536 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004109580.1	PFAM: Protein of unknown function DUF2274; KEGG: xau:Xaut_0739 hypothetical protein
YP_004109581.1	PFAM: conjugation TrbI family protein; KEGG: bja:blr1620 conjugal transfer protein
YP_004109582.1	KEGG: bbt:BBta_7448 putative conjugal transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX
YP_004109583.1	KEGG: bja:blr1618 conjugal transfer protein TrbF
YP_004109584.1	KEGG: bbt:BBta_1505 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein
YP_004109585.1	KEGG: bbt:BBta_3369 hypothetical protein
YP_004109586.1	TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: bbt:BBta_3368 conjugal transfer protein TrbJ
YP_004109587.1	KEGG: bbt:BBta_3367 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase
YP_004109588.1	KEGG: oan:Oant_3214 conjugal transfer protein TrbB
YP_004109589.1	PFAM: Conjugal transfer protein TrbC; KEGG: bbt:BBta_7742 conjugal transfer protein TrbC precursor
YP_004109590.1	KEGG: bbt:BBta_7741 conjugal transfer protein TrbB; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E
YP_004109591.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pst:PSPTO_1004 GGDEF domain protein; SMART: GGDEF domain containing protein
YP_004109592.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: bbt:BBta_2308 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein
YP_004109593.1	KEGG: xal:XALc_0354 probable biotin synthase protein
YP_004109594.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll3855 putative acyl-CoA dehydrogenase
YP_004109595.1	KEGG: mlo:mll1722 ATP-binding protein of sugar ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109596.1	PFAM: inner-membrane translocator; Strictosidine synthase, conserved region; KEGG: bja:blr7869 ABC transporter permease protein
YP_004109597.1	KEGG: vei:Veis_3291 ABC transporter substrate-binding protein
YP_004109598.1	PFAM: inner-membrane translocator; KEGG: vei:Veis_3290 inner-membrane translocator
YP_004109599.1	KEGG: mno:Mnod_3745 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004109600.1	manually curated; KEGG: bbt:BBta_3357 hypothetical protein
YP_004109601.1	PFAM: TRAG family protein; KEGG: bbt:BBta_3356 conjugal transfer coupling protein TraG
YP_004109602.1	KEGG: bbt:BBta_3351 hypothetical protein
YP_004109603.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: xau:Xaut_4009 transposase IS116/IS110/IS902 family protein
YP_004109604.1	PFAM: Lytic transglycosylase catalytic; KEGG: bbt:BBta_3350 putative lytic transglycosylase
YP_004109605.1	PFAM: Peptidase S26, conserved region; KEGG: bbt:BBta_7435 putative conjugal transfer protein precursor
YP_004109606.1	KEGG: xau:Xaut_4012 hypothetical protein
YP_004109607.1	PFAM: Replication initiator protein A; KEGG: bbt:BBta_3347 putative replication protein A
YP_004109608.1	KEGG: bbt:BBta_3346 hypothetical protein
YP_004109609.1	manually curated; KEGG: bbt:BBta_1487 hypothetical protein
YP_004109610.1	KEGG: bbt:BBta_3343 hypothetical protein
YP_004109611.1	manually curated; PFAM: helix-turn-helix domain protein; KEGG: oan:Oant_1848 XRE family transcriptional regulator; SMART: helix-turn-helix domain protein
YP_004109612.1	PFAM: protein of unknown function DUF736; KEGG: bbt:BBta_7420 hypothetical protein
YP_004109613.1	KEGG: mgr:MGG_04575 hypothetical protein
YP_004109614.1	PFAM: Protein of unknown function DUF2493; KEGG: bbt:BBta_7415 hypothetical protein
YP_004109615.1	manually curated; KEGG: bbt:BBta_7414 hypothetical protein
YP_004109616.1	KEGG: gdj:Gdia_2784 putative methylase/helicase
YP_004109617.1	KEGG: gdj:Gdia_2781 ParB domain protein nuclease; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease
YP_004109618.1	PFAM: domain of unknown function DUF1738; KEGG: bbt:BBta_7394 putative ArdC antirestriction protein
YP_004109619.1	PFAM: Prophage CP4-57 regulatory; KEGG: nwi:Nwi_2141 prophage CP4-57 regulatory
YP_004109620.1	PFAM: integrase family protein; KEGG: azl:AZL_011700 phage integrase
YP_004109621.1	KEGG: nwi:Nwi_2143 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I
YP_004109622.1	PFAM: Fmu (Sun) domain protein; KEGG: bja:blr3985 Sun protein
YP_004109623.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bbt:BBta_3611 putative NADP-dependent oxidoreductase
YP_004109624.1	SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: bbt:BBta_3610 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein
YP_004109625.1	KEGG: nwi:Nwi_2147 hypothetical protein
YP_004109626.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3608 putative multidrug efflux protein
YP_004109628.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: oca:OCAR_6472 ribosomal RNA large subunit methyltransferase J
YP_004109629.1	KEGG: avi:Avi_2601 hypothetical protein
YP_004109630.1	PFAM: Ppx/GppA phosphatase; KEGG: bja:blr3969 exopolyphosphatase
YP_004109631.1	KEGG: bja:bll3968 carbon monoxide dehydrogenase large chain; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead
YP_004109632.1	PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_5091 putative branched-chain amino acid ABC transporter, substrate-binding protein
YP_004109633.1	KEGG: bbt:BBta_3593 hypothetical protein
YP_004109634.1	PFAM: protein of unknown function DUF188; KEGG: bja:bll3966 hypothetical protein
YP_004109635.1	KEGG: nha:Nham_2552 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109636.1	PFAM: alanine racemase domain protein; KEGG: bra:BRADO3145 putative amino acid processing enzyme-related protein (aldolase or racemase)
YP_004109637.1	PFAM: HI0933 family protein; KEGG: bra:BRADO3144 putative signal peptide
YP_004109638.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_3584 putative 3-oxo-(acyl) acyl carrier protein reductase
YP_004109639.1	PFAM: MaoC domain protein dehydratase; KEGG: nha:Nham_2554 MaoC-like dehydratase
YP_004109640.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_5263 putative oxidoreductase
YP_004109641.1	PFAM: DSBA oxidoreductase; KEGG: bja:bll5606 putative 2-hydroxychromene-2-carboxylate isomerase
YP_004109642.1	PFAM: Glutathione S-transferase domain; KEGG: bja:bll5607 glutathione S-transferase
YP_004109643.1	PFAM: Methionine synthase vitamin-B12 independent; KEGG: bra:BRADO2911 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
YP_004109644.1	KEGG: nha:Nham_2589 hypothetical protein
YP_004109645.1	KEGG: bja:bll5610 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_004109646.1	PFAM: molybdopterin binding domain; KEGG: bbt:BBta_5271 hypothetical protein
YP_004109647.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bbt:BBta_5273 hypothetical protein
YP_004109648.1	PFAM: protein of unknown function DUF403; KEGG: bra:BRADO2904 hypothetical protein
YP_004109649.1	KEGG: bja:blr5614 hypothetical protein; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein
YP_004109650.1	PFAM: 20S proteasome A and B subunits; KEGG: bja:blr5617 hypothetical protein
YP_004109651.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_2393 hypothetical protein
YP_004109652.1	KEGG: mlo:mlr0003 hypothetical protein
YP_004109653.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr5618 putative oxidoreductase protein
YP_004109654.1	PFAM: Proteinase inhibitor I42, chagasin; KEGG: mma:MM_0269 hypothetical protein
YP_004109655.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: mrb:Mrub_0901 cupin 2 conserved barrel domain-containing protein
YP_004109656.1	PFAM: ribulose bisphosphate carboxylase large chain; KEGG: rru:Rru_A1998 ribulose 1,5-bisphosphate carboxylase large subunit
YP_004109657.1	PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; KEGG: bja:blr5621 hypothetical protein
YP_004109658.1	KEGG: rcu:RCOM_1844190 hypothetical protein
YP_004109659.1	KEGG: vei:Veis_2854 hypothetical protein
YP_004109660.1	KEGG: ach:Achl_4618 6-phosphofructokinase
YP_004109661.1	PFAM: Usg family protein; KEGG: nha:Nham_2592 hypothetical protein
YP_004109662.1	PFAM: Chaperonin Cpn10; KEGG: bra:BRADO2893 co-chaperonin GroES
YP_004109663.1	KEGG: bbt:BBta_5285 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1
YP_004109664.1	PFAM: plasmid maintenance system killer; KEGG: msl:Msil_2105 plasmid maintenance system killer
YP_004109665.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: mpo:Mpop_2927 plasmid maintenance system antidote protein, XRE family; SMART: helix-turn-helix domain protein
YP_004109666.1	KEGG: rru:Rru_A3411 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004109667.1	PFAM: protein of unknown function DUF891; KEGG: cak:Caul_5448 hypothetical protein
YP_004109668.1	KEGG: bbt:BBta_4386 transporter; TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein
YP_004109669.1	KEGG: bbt:BBta_4243 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR
YP_004109670.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_4242 putative short-chain dehydrogenases/reductases (SDR) family protein
YP_004109671.1	KEGG: oca:OCAR_5493 hypothetical protein
YP_004109672.1	KEGG: bra:BRADO2881 hypothetical protein
YP_004109673.1	KEGG: bid:Bind_2047 hypothetical protein
YP_004109674.1	PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rlt:Rleg2_5933 protein of unknown function DUF899 thioredoxin family protein
YP_004109675.1	KEGG: bbt:BBta_2834 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_004109677.1	PFAM: Aldehyde Dehydrogenase; KEGG: bbt:BBta_2831 aldehyde dehydrogenase
YP_004109678.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: oca:OCAR_6732 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein
YP_004109679.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bra:BRADO2478 putative transmembrane protein
YP_004109680.1	PFAM: aldo/keto reductase; KEGG: bja:blr2810 aldo/keto reductase
YP_004109681.1	KEGG: bbt:BBta_2816 putative catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein
YP_004109682.1	PFAM: beta-lactamase; KEGG: nha:Nham_2704 beta-lactamase
YP_004109683.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rer:RER_46870 fatty-acid--CoA ligase
YP_004109684.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO5287 enoyl-CoA hydratase
YP_004109685.1	PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: bja:blr0987 3-methylcrotonyl-CoA carboxylase alpha subunit
YP_004109686.1	KEGG: bbt:BBta_0675 putative carboxylase; PFAM: carboxyl transferase
YP_004109687.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0674 putative fatty-acid--CoA ligase
YP_004109688.1	PFAM: protein of unknown function DUF849; KEGG: bbt:BBta_0673 hypothetical protein
YP_004109689.1	SMART: Helix-turn-helix, AraC domain; KEGG: bbt:BBta_0671 AraC family transcriptional regulator
YP_004109690.1	PFAM: Glutathione S-transferase domain; KEGG: bja:blr0983 glutathione S-transferase family protein
YP_004109691.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO6880 putative acyl-CoA dehydrogenase
YP_004109692.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr0981 acyl-CoA dehydrogenase
YP_004109693.1	KEGG: bja:blr6128 cytochrome c552
YP_004109694.1	KEGG: bja:blr0516 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator receiver
YP_004109695.1	KEGG: nha:Nham_2144 hypothetical protein
YP_004109696.1	KEGG: bbt:BBta_1104 hypothetical protein
YP_004109697.1	KEGG: bra:BRADO6538 hypothetical protein
YP_004109698.1	PFAM: protein of unknown function DUF81; KEGG: bvi:Bcep1808_3205 hypothetical protein
YP_004109699.1	KEGG: bbt:BBta_2219 hypothetical protein
YP_004109701.1	KEGG: bja:bll7071 TonB protein; TIGRFAM: TonB family protein; PFAM: TonB domain
YP_004109702.1	KEGG: bja:bll7072 biopolymer transport protein; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR
YP_004109703.1	KEGG: bja:bll7073 biopolymer transport protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel
YP_004109704.1	PFAM: protein of unknown function DUF1008; KEGG: bja:bll7074 hypothetical protein
YP_004109705.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bja:bll7075 hypothetical protein
YP_004109706.1	KEGG: bja:bll7076 hemin receptor precursor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug
YP_004109707.1	PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: hha:Hhal_0382 NAD-dependent epimerase/dehydratase family protein
YP_004109708.1	KEGG: hemN1; oxygen-independent coproporphyrinogen-III oxidase-1; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004109709.1	PFAM: Hemin uptake protein hemP; KEGG: oca:OCAR_4889 hypothetical protein
YP_004109710.1	PFAM: periplasmic binding protein; KEGG: bja:blr7077 hemin ABC transporter hemin-binding protein
YP_004109711.1	PFAM: transport system permease protein; KEGG: nwi:Nwi_2323 ABC-type Fe3+-siderophore transport system permease component
YP_004109712.1	KEGG: bja:blr7079 hemin importer ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109713.1	KEGG: azc:AZC_2373 flavodoxin FldA; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase
YP_004109714.1	PFAM: Domain of unknown function DUF2023; KEGG: xau:Xaut_0833 hypothetical protein
YP_004109715.1	TIGRFAM: cyanate lyase; KEGG: bbt:BBta_5412 cyanate hydratase; PFAM: Cyanate lyase domain protein
YP_004109716.1	KEGG: bja:bll5732 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109717.1	KEGG: bbt:BBta_5414 putative nitrate ABC transporter (permease protein) (NtrB-like protein); TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004109718.1	KEGG: bja:bll5734 ABC transporter nitrate-binding protein
YP_004109719.1	TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: bja:blr5735 transcriptional regulatory protein; SMART: AAA ATPase; PAC repeat-containing protein; PAS domain containing protein
YP_004109720.1	TIGRFAM: precorrin-6A synthase (deacetylating); KEGG: rhi:NGR_c29820 deacetylating precorrin-6A synthase CobF; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004109721.1	KEGG: rce:RC1_0321 cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase
YP_004109722.1	PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cobalamin 5'-phosphate synthase
YP_004109723.1	TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_004109724.1	manually curated; TIGRFAM: precorrin 3B synthase CobZ; KEGG: alv:Alvin_1082 precorrin 3B synthase CobZ; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_004109725.1	TIGRFAM: CitB domain protein; KEGG: azl:AZL_b02760 citrate utilization protein B
YP_004109726.1	KEGG: bja:blr3263 cobaltochelatase subunit CobN
YP_004109727.1	KEGG: rde:RD1_3825 precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH
YP_004109728.1	KEGG: sil:SPO2866 precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004109729.1	TIGRFAM: precorrin-3B C17-methyltransferase; KEGG: sjp:SJA_C2-03130 precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004109730.1	TIGRFAM: precorrin-6x reductase; KEGG: rde:RD1_3822 precorrin-6A reductase; PFAM: Precorrin-6x reductase CbiJ/CobK
YP_004109731.1	TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: xau:Xaut_3280 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004109732.1	PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: mdi:METDI1514 putative cobalamin biosynthesis protein
YP_004109733.1	TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: rec:RHECIAT_PA0000372 precorrin-4 c(11)-methyltransferase protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004109734.1	KEGG: pde:Pden_2541 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase
YP_004109735.1	KEGG: sil:SPO2873 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_004109736.1	KEGG: nha:Nham_3728 periplasmic binding protein; manually curated; PFAM: periplasmic binding protein
YP_004109737.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mag:amb3574 hypothetical protein
YP_004109738.1	KEGG: mag:amb3575 hypothetical protein
YP_004109739.1	KEGG: mag:amb3576 hypothetical protein
YP_004109740.1	KEGG: pla:Plav_1007 hypothetical protein
YP_004109741.1	PFAM: ApbE family lipoprotein; KEGG: oca:OCAR_5025 NosX
YP_004109742.1	KEGG: bja:blr0319 NosL protein
YP_004109743.1	KEGG: bja:blr0318 nitrous oxide metabolic protein
YP_004109744.1	KEGG: bja:blr0317 copper ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109745.1	KEGG: bja:blr0316 periplasmic copper-binding precursor; PFAM: periplasmic copper-binding; SMART: Carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat
YP_004109746.1	KEGG: bja:blr0315 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II
YP_004109747.1	PFAM: FMN-binding domain protein; KEGG: bja:blr0314 nitrous oxide reductase expression regulator
YP_004109748.1	KEGG: oca:OCAR_5032 hypothetical protein
YP_004109749.1	KEGG: rme:Rmet_4922 hypothetical protein
YP_004109750.1	KEGG: bbt:BBta_3741 hypothetical protein
YP_004109751.1	KEGG: dac:Daci_2667 binding-protein-dependent transport systems inner membrane component
YP_004109752.1	PFAM: NUDIX hydrolase; KEGG: mea:Mex_2p0985 hypothetical protein
YP_004109753.1	KEGG: oca:OCAR_7726 cation efflux system protein CzcA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_004109754.1	KEGG: oca:OCAR_7727 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004109755.1	PFAM: outer membrane efflux protein; KEGG: oca:OCAR_7728 outer membrane efflux protein
YP_004109756.1	KEGG: nwi:Nwi_1454 hypothetical protein
YP_004109757.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_0929 GCN5-related N-acetyltransferase
YP_004109758.1	KEGG: bid:Bind_0928 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein
YP_004109759.1	KEGG: nha:Nham_4501 hypothetical protein
YP_004109760.1	PFAM: Pseudomurein-binding repeat; KEGG: pap:PSPA7_5332 Sea12
YP_004109761.1	KEGG: pap:PSPA7_5334 type II restriction enzyme, methylase subunit
YP_004109762.1	KEGG: bbt:BBta_6040 hypothetical protein
YP_004109763.1	KEGG: pag:PLES_55611 putative C4-dicarboxylate transporter; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004109764.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: hch:HCH_06606 TRAP-type C4-dicarboxylate transport system, small permease component
YP_004109765.1	KEGG: psa:PST_0078 C4 dicarboxylate binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7
YP_004109766.1	KEGG: bra:BRADO5528 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain
YP_004109767.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: mlo:mll5831 biotin synthetase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein
YP_004109768.1	PFAM: GCN5-related N-acetyltransferase; KEGG: nhl:Nhal_3981 GCN5-related N-acetyltransferase
YP_004109769.1	PFAM: Protein of unknown function DUF1778; KEGG: pph:Ppha_1718 protein of unknown function DUF1778
YP_004109770.1	KEGG: nha:Nham_2717 hypothetical protein
YP_004109771.1	SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_6066 ABC transporter substrate-binding protein
YP_004109772.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_6067 ABC transporter permease
YP_004109773.1	KEGG: bja:bll6488 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109774.1	KEGG: nha:Nham_2718 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109775.1	PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO5551 putative glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein)
YP_004109776.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO5556 oxidoreductase
YP_004109777.1	PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO0975 branched chain amino acid ABC transporter periplasmic-binding protein
YP_004109778.1	KEGG: bpy:Bphyt_6461 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004109779.1	TIGRFAM: ketol-acid reductoisomerase; KEGG: bja:bll6497 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase
YP_004109780.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bja:bll6498 hypothetical protein
YP_004109781.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:bll6499 putative amino acid metabolite efflux pump
YP_004109782.1	PFAM: Host attachment protein; KEGG: xcv:XCV0079 hypothetical protein
YP_004109783.1	KEGG: bra:BRADO5562 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein
YP_004109784.1	KEGG: bra:BRADO5564 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding
YP_004109785.1	PFAM: tRNA isopentenyltransferase; manually curated; KEGG: nha:Nham_2723 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase
YP_004109786.1	TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: bja:blr6505 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004109787.1	KEGG: mno:Mnod_4564 hypothetical protein
YP_004109788.1	PFAM: HerA-ATP synthase, barrel domain; KEGG: bja:bll3818 hypothetical protein
YP_004109789.1	KEGG: bbt:BBta_3525 hypothetical protein; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase
YP_004109790.1	PFAM: MgtC/SapB transporter; KEGG: bja:bll3816 putative sulfur-regulated protein
YP_004109791.1	KEGG: bra:BRADO4674 hypothetical protein
YP_004109792.1	PFAM: phosphopantetheine-binding; KEGG: nha:Nham_1506 acyl carrier protein
YP_004109793.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: nwi:Nwi_1245 3-hydroxymyristoyl-acyl carrier protein dehydratase
YP_004109794.1	PFAM: Beta-ketoacyl synthase; KEGG: nha:Nham_1504 3-oxoacyl-(acyl carrier protein) synthase II
YP_004109795.1	PFAM: Beta-ketoacyl synthase; KEGG: nha:Nham_1503 3-oxoacyl-(acyl carrier protein) synthase II
YP_004109796.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: oca:OCAR_6502 alcohol dehydrogenase
YP_004109797.1	PFAM: lipid A biosynthesis acyltransferase; KEGG: nha:Nham_1502 lipid A biosynthesis lauroyl acyltransferase
YP_004109798.1	KEGG: psl:Psta_1421 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004109799.1	PFAM: extracellular solute-binding protein family 1; KEGG: bbt:BBta_3516 putrescine ABC transporter, periplasmic binding protein
YP_004109800.1	PFAM: aminotransferase class I and II; KEGG: bbt:BBta_3515 hypothetical protein
YP_004109801.1	SMART: Rhodanese domain protein; KEGG: bja:blr3804 hypothetical protein
YP_004109802.1	PFAM: OmpA/MotB domain protein; KEGG: nha:Nham_1496 OmpA/MotB
YP_004109803.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: bra:BRADO4687 putative chemotaxis protein MotA (flagellar motor component)
YP_004109804.1	KEGG: bja:blr3797 phosphatidylserine synthase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004109805.1	TIGRFAM: phosphatidylserine decarboxylase related protein; KEGG: oca:OCAR_6512 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related
YP_004109806.1	KEGG: bja:blr3795 ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_004109807.1	PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_1232 hypothetical protein
YP_004109808.1	KEGG: xau:Xaut_1071 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I
YP_004109809.1	PFAM: FAD linked oxidase domain protein; KEGG: pla:Plav_2705 FAD linked oxidase domain-containing protein
YP_004109810.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pla:Plav_0755 hypothetical protein
YP_004109811.1	KEGG: nwi:Nwi_1231 putative alpha-isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase
YP_004109812.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_3500 acetyltransferase
YP_004109813.1	KEGG: bbt:BBta_3499 hypothetical protein
YP_004109814.1	TIGRFAM: cysteinyl-tRNA synthetase; KEGG: bbt:BBta_3498 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia
YP_004109815.1	KEGG: bja:bll3789 hypothetical protein
YP_004109816.1	KEGG: nha:Nham_1486 hypothetical protein
YP_004109817.1	PFAM: amine oxidase; KEGG: nca:Noca_3672 protoporphyrinogen oxidase
YP_004109818.1	KEGG: pag:PLES_09021 putative transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR
YP_004109819.1	PFAM: SpoVT/AbrB domain protein; KEGG: rec:RHECIAT_CH0002963 hypothetical protein
YP_004109820.1	PFAM: PilT protein domain protein; KEGG: rec:RHECIAT_CH0002962 hypothetical protein
YP_004109821.1	KEGG: shw:Sputw3181_4076 hypothetical protein
YP_004109822.1	TIGRFAM: NAD+ synthetase; KEGG: nha:Nham_1485 NAD synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004109823.1	PFAM: diacylglycerol kinase; KEGG: nha:Nham_1484 diacylglycerol kinase
YP_004109824.1	TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bja:blr3778 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II
YP_004109825.1	KEGG: nha:Nham_1482 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region
YP_004109826.1	PFAM: Protein of unknown function DUF2059; KEGG: nwi:Nwi_1222 hypothetical protein
YP_004109827.1	TIGRFAM: ribose 5-phosphate isomerase; KEGG: oca:OCAR_6529 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase
YP_004109828.1	KEGG: bbt:BBta_3482 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004109829.1	KEGG: nha:Nham_1478 hypothetical protein
YP_004109830.1	TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: bja:bll3752 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB
YP_004109831.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: oca:OCAR_6533 tripartite ATP-independent periplasmic transporter
YP_004109832.1	KEGG: oca:OCAR_6534 trap dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004109833.1	PFAM: Extracellular solute-binding protein, family 7; KEGG: bbt:BBta_3466 putative periplasmic mannitol-binding protein
YP_004109834.1	PFAM: ATPase-like, ParA/MinD; KEGG: bja:blr3742 multidrug-resistance related protein
YP_004109835.1	PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bra:BRADO4737 putative oxidoreductase; putative 3-hydroxyisobutyrate dehydrogenase
YP_004109836.1	KEGG: nha:Nham_1469 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004109837.1	PFAM: protein of unknown function DUF1289; KEGG: bja:bsl3737 hypothetical protein
YP_004109838.1	KEGG: nwi:Nwi_1211 hypothetical protein
YP_004109839.1	manually curated; TIGRFAM: TIM-barrel protein, yjbN family; KEGG: bra:BRADO4745 tRNA-dihydrouridine synthase A; PFAM: dihydrouridine synthase DuS
YP_004109840.1	PFAM: acriflavin resistance protein; KEGG: nha:Nham_1082 acriflavin resistance protein
YP_004109841.1	KEGG: bra:BRADO1901 putative component of multidrug efflux system; putative signal peptide; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004109842.1	PFAM: regulatory protein TetR; KEGG: psp:PSPPH_3268 TetR family transcriptional regulator
YP_004109843.1	KEGG: ret:RHE_CH02959 adenylate cyclase protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein
YP_004109844.1	KEGG: bja:blr4686 hypothetical protein
YP_004109845.1	PFAM: Patatin; KEGG: oca:OCAR_4867 patatin
YP_004109846.1	KEGG: bpm:BURPS1710b_A0059 thiaminase I precursor
YP_004109847.1	PFAM: acriflavin resistance protein; KEGG: bbt:BBta_2039 RND family mulitdrug efflux protein
YP_004109848.1	KEGG: bbt:BBta_2040 RND family mulitdrug efflux protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004109849.1	KEGG: bra:BRADO1729 RND family mulitdrug efflux protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004109850.1	PFAM: regulatory protein TetR; KEGG: xau:Xaut_4925 TetR family transcriptional regulator
YP_004109851.1	PFAM: Luciferase-like, subgroup; KEGG: azc:AZC_4553 putative alkanal monooxygenase
YP_004109852.1	SMART: AAA ATPase; KEGG: bra:BRADO5753 putative ATPase
YP_004109853.1	KEGG: bbt:BBta_5970 alcohol dehydrogenase class III; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein
YP_004109854.1	TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: bbt:BBta_6304 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB
YP_004109855.1	KEGG: bra:BRADO5796 coenzyme PQQ synthesis protein D (pyrroloquinoline quinone biosynthesis protein D)(PqqD)
YP_004109856.1	TIGRFAM: coenzyme PQQ biosynthesis protein C; KEGG: bja:blr6737 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 domain protein
YP_004109857.1	TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: bja:blr6736 pyrroloquinoline quinone biosynthesis protein PqqB
YP_004109858.1	manually curated; TIGRFAM: coenzyme PQQ biosynthesis protein A; KEGG: bbt:BBta_6300 pyrroloquinoline quinone biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A
YP_004109859.1	KEGG: bja:bll3158 transcriptional regulatory protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004109860.1	KEGG: bja:bll3156 formyl-coenzyme A transferase; TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F
YP_004109861.1	TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bja:bll3147 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein
YP_004109862.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bja:bll3146 hypothetical protein
YP_004109863.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: bja:bll3143 hypothetical protein
YP_004109864.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bra:BRADO4966 putative NADPH quinone oxidoreductase
YP_004109865.1	KEGG: nha:Nham_1450 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein
YP_004109866.1	KEGG: nha:Nham_1449 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein
YP_004109867.1	KEGG: azc:AZC_3227 putative outer membrane autotransporter barrel precursor; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin
YP_004109868.1	KEGG: mpo:Mpop_2366 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004109869.1	KEGG: bbt:BBta_2046 hypothetical protein
YP_004109870.1	KEGG: nwi:Nwi_1199 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase
YP_004109871.1	KEGG: bbt:BBta_3085 putative two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein
YP_004109872.1	KEGG: rru:Rru_A1802 chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein
YP_004109873.1	KEGG: bbt:BBta_3078 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004109874.1	SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bra:BRADO2741 putative serine protease do-like precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein
YP_004109875.1	PFAM: ferredoxin; KEGG: mgm:Mmc1_1188 ferredoxin
YP_004109876.1	KEGG: msl:Msil_3779 rubrerythrin
YP_004109877.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rsh:Rsph17029_3566 cobalamin synthesis protein, P47K
YP_004109878.1	KEGG: apt:APA01_01550 aliphatic amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004109879.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bbt:BBta_3438 putative secretion protein HlyD precursor
YP_004109880.1	PFAM: protein of unknown function DUF214; KEGG: bbt:BBta_5376 hypothetical protein
YP_004109881.1	KEGG: bbt:BBta_5377 putative ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004109882.1	PFAM: cytochrome C biogenesis protein; KEGG: bja:blr3128 cytochrome c-type biogenesis protein
YP_004109883.1	KEGG: nwi:Nwi_1193 cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein
YP_004109884.1	PFAM: CcmE/CycJ protein; KEGG: bra:BRADO2733 cytochrome c-type biogenesis protein CcmE
YP_004109885.1	TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: bbt:BBta_3071 cytochrome c-type biogenesis protein CycH
YP_004109886.1	KEGG: nha:Nham_1436 hypothetical protein
YP_004109887.1	KEGG: nha:Nham_1435 LipA a lipoprotein
YP_004109888.1	KEGG: nha:Nham_1434 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein
YP_004109889.1	KEGG: nha:Nham_1433 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004109890.1	KEGG: azc:AZC_2138 hypothetical protein
YP_004109891.1	KEGG: nha:Nham_1429 putative glycohydrolase
YP_004109892.1	PFAM: Radical SAM domain protein; KEGG: cyc:PCC7424_4250 radical SAM domain protein
YP_004109893.1	KEGG: nwi:Nwi_1182 hypothetical protein
YP_004109894.1	KEGG: nha:Nham_1426 gene transfer agent (GTA) orfg15, like protein
YP_004109895.1	KEGG: rle:RL3155 putative cytochrome b561
YP_004109896.1	KEGG: rhi:NGR_c30270 hypothetical protein
YP_004109897.1	KEGG: mno:Mnod_3659 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004109898.1	KEGG: dsi:Dsim_GD24223 GD24223 gene product from transcript GD24223-RA
YP_004109899.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mrd:Mrad2831_2003 glutathione-dependent formaldehyde-activating GFA
YP_004109900.1	TIGRFAM: phage cell wall peptidase, NlpC/P60 family; KEGG: nwi:Nwi_1180 putative phage cell wall peptidase, NlpC/P60
YP_004109901.1	PFAM: Phage conserved hypothetical protein, gene transfer agent-like-like; KEGG: nwi:Nwi_1179 hypothetical protein
YP_004109902.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rle:pRL100302 putative acyl-CoA dehydrogenase
YP_004109903.1	TIGRFAM: acetyl-CoA acetyltransferase; KEGG: xau:Xaut_4665 acetyl-CoA acetyltransferase; PFAM: Thiolase-like
YP_004109904.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_4664 short-chain dehydrogenase/reductase SDR
YP_004109905.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bcj:BCAS0739 putative acetyl-CoA synthetase
YP_004109906.1	KEGG: xau:Xaut_4663 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004109907.1	KEGG: bra:BRADO1260 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR
YP_004109908.1	PFAM: flagellar FlbT family protein; KEGG: bra:BRADO7004 flagellar biosynthesis repressor FlbT
YP_004109909.1	PFAM: protein of unknown function DUF1522; KEGG: bja:bll5846 flagellin
YP_004109910.1	PFAM: conserved hypothetical protein; KEGG: nha:Nham_1423 hypothetical protein
YP_004109911.1	KEGG: nha:Nham_1422 gene transfer agent (GTA) like protein
YP_004109912.1	KEGG: oca:OCAR_6592 hypothetical protein
YP_004109913.1	KEGG: nha:Nham_1420 gene transfer agent (GTA) like protein
YP_004109914.1	TIGRFAM: phage major tail protein, TP901-1 family; KEGG: nha:Nham_1419 phage major tail protein, TP901-1
YP_004109915.1	KEGG: oca:OCAR_6595 gene transfer agent
YP_004109916.1	TIGRFAM: phage head-tail adaptor; KEGG: oca:OCAR_6596 putative phage head-tail adaptor
YP_004109917.1	KEGG: nha:Nham_1417 phiE125 gp8 hypothetical protein
YP_004109918.1	KEGG: bbt:BBta_0650 putative serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap
YP_004109919.1	KEGG: nwi:Nwi_1895 hypothetical protein
YP_004109920.1	KEGG: azc:AZC_1105 hypothetical protein
YP_004109921.1	KEGG: oca:OCAR_6612 hypothetical protein
YP_004109922.1	KEGG: mpo:Mpop_5347 HicB family protein
YP_004109924.1	KEGG: deh:cbdb_A1489 hypothetical protein
YP_004109925.1	KEGG: sth:STH1310 site-specific DNA-methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase
YP_004109926.1	manually curated; TIGRFAM: DNA mismatch endonuclease Vsr; KEGG: pmb:A9601_04271 hypothetical protein; PFAM: DNA mismatch endonuclease vsr
YP_004109927.1	PFAM: Domain of unknown function DUF2019; KEGG: mes:Meso_2040 hypothetical protein
YP_004109928.1	KEGG: nwi:Nwi_1168 hypothetical protein
YP_004109929.1	TIGRFAM: phage major capsid protein, HK97 family; KEGG: oca:OCAR_6602 phage major capsid protein, HK97 family
YP_004109930.1	KEGG: nha:Nham_1412 hypothetical protein
YP_004109931.1	KEGG: nha:Nham_1411 hypothetical protein
YP_004109932.1	KEGG: psl:Psta_3457 hypothetical protein
YP_004109933.1	KEGG: oca:OCAR_6609 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein
YP_004109934.1	KEGG: bra:BRADO2727 hypothetical protein
YP_004109935.1	PFAM: Flp/Fap pilin component; KEGG: nha:Nham_0394 Flp/Fap pilin component
YP_004109936.1	KEGG: nha:Nham_0909 hypothetical protein
YP_004109937.1	PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3058 major facilitator superfamily permease
YP_004109938.1	PFAM: Choloylglycine hydrolase; KEGG: gdj:Gdia_2282 choloylglycine hydrolase
YP_004109939.1	KEGG: tva:TVAG_124720 hypothetical protein
YP_004109940.1	KEGG: sme:SMc04432 hypothetical protein
YP_004109941.1	PFAM: protein of unknown function DUF497; KEGG: rsp:RSP_2763 hypothetical protein
YP_004109942.1	KEGG: bra:BRADO4091 putative beta-lactamase family protein; putative 6-aminohexanoate-dimer hydrolase; PFAM: beta-lactamase
YP_004109943.1	KEGG: mch:Mchl_5652 hypothetical protein
YP_004109944.1	PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mch:Mchl_5651 peptidase S8 and S53 subtilisin kexin sedolisin
YP_004109945.1	PFAM: Patatin; KEGG: bra:BRADO1558 alpha-beta hydrolase family esterase
YP_004109946.1	KEGG: rru:Rru_A2395 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug
YP_004109947.1	KEGG: bbt:BBta_2666 putative uncharacterized iron-regulated membrane protein
YP_004109948.1	KEGG: pfs:PFLU5631 hypothetical protein
YP_004109949.1	PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein
YP_004109950.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr1050 branched chain amino acid transport system substrate binding protein
YP_004109951.1	PFAM: ferredoxin; KEGG: bja:blr1049 ferrodoxin
YP_004109952.1	PFAM: cytochrome P450; KEGG: bbt:BBta_0729 putative cytochrome P450
YP_004109953.1	KEGG: bja:bll1047 transcriptional regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004109954.1	PFAM: protein of unknown function DUF81; KEGG: bch:Bcen2424_3236 hypothetical protein
YP_004109955.1	PFAM: protein of unknown function UPF0153; KEGG: bja:blr3103 hypothetical protein
YP_004109956.1	TIGRFAM: penicillin-binding protein, 1A family; KEGG: bra:BRADO2718 putative penicillin-binding protein (MrcA-like); PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase
YP_004109957.1	PFAM: protein of unknown function DUF1214; KEGG: bra:BRADO2717 putative signal peptide
YP_004109958.1	KEGG: bja:bll3100 hypothetical protein
YP_004109959.1	KEGG: nwi:Nwi_1147 hypothetical protein
YP_004109960.1	KEGG: oca:OCAR_6625 hypothetical protein
YP_004109961.1	KEGG: bja:blr5578 hypothetical protein
YP_004109962.1	PFAM: polysaccharide deacetylase; KEGG: nha:Nham_1255 polysaccharide deacetylase
YP_004109963.1	KEGG: nha:Nham_1399 hypothetical protein
YP_004109964.1	PFAM: protein of unknown function DUF1491; KEGG: bbt:BBta_3047 hypothetical protein
YP_004109965.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bra:BRADO2709 hypothetical protein
YP_004109966.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: bra:BRADO2708 sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_004109967.1	KEGG: bra:BRADO2707 hypothetical protein
YP_004109968.1	PFAM: Fe-S metabolism associated SufE; KEGG: bbt:BBta_3043 putative SufE-like protein
YP_004109969.1	KEGG: nwi:Nwi_2226 DNA replication initiation ATPase
YP_004109970.1	PFAM: regulatory protein TetR; KEGG: rlg:Rleg_0120 transcriptional regulator, TetR family
YP_004109971.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mdi:METDI4223 putative short-chain dehydrogenase/reductase SDR
YP_004109972.1	PFAM: ROSMUCR transcriptional regulator; KEGG: nha:Nham_2627 MucR family transcriptional regulator
YP_004109973.1	KEGG: bja:blr3067 hypothetical protein
YP_004109974.1	PFAM: class II aldolase/adducin family protein; KEGG: bra:BRADO2701 aldolase II superfamily protein
YP_004109975.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sme:SM_b20636 putative transposase of insertion sequence ISRm19 protein
YP_004109976.1	KEGG: oca:OCAR_4725 hypothetical protein
YP_004109977.1	KEGG: oca:OCAR_4724 PepSY-associated TM helix
YP_004109978.1	KEGG: oca:OCAR_4723 hypothetical protein
YP_004109979.1	KEGG: oca:OCAR_4722 hypothetical protein
YP_004109980.1	KEGG: oca:OCAR_4721 ferrichrome receptor FcuA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug
YP_004109981.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: nha:Nham_2629 hypothetical protein
YP_004109982.1	PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: bra:BRADO2688 putative ATPase
YP_004109983.1	KEGG: bja:bll3061 hypothetical protein
YP_004109984.1	KEGG: nwi:Nwi_2232 hypothetical protein
YP_004109985.1	TIGRFAM: dihydropteroate synthase; KEGG: nha:Nham_2633 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS
YP_004109986.1	KEGG: oca:OCAR_6643 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase
YP_004109987.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: nha:Nham_2635 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK
YP_004109988.1	KEGG: bja:bll3056 methylmalonyl-CoA mutase small subunit; PFAM: methylmalonyl-CoA mutase
YP_004109989.1	PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bra:BRADO2681 putative glutathione-dependent formaldehyde-activating (GFA)
YP_004109990.1	TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: bbt:BBta_3021 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein
YP_004109991.1	TIGRFAM: prevent-host-death family protein; KEGG: gvi:gsl1680 hypothetical protein
YP_004109992.1	PFAM: PilT protein domain protein; KEGG: gvi:gll1679 hypothetical protein
YP_004109993.1	PFAM: DNA polymerase beta domain protein region; KEGG: bja:bsl3053 hypothetical protein
YP_004109994.1	PFAM: protein of unknown function DUF86; KEGG: rce:RC1_2668 hypothetical protein
YP_004109995.1	KEGG: bja:bll3052 hypothetical protein
YP_004109996.1	KEGG: bbt:BBta_3019 arginine/ornithine transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein
YP_004109997.1	PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: nwi:Nwi_2241 peptidase C15, pyroglutamyl peptidase I
YP_004109998.1	KEGG: nha:Nham_2646 nitrous oxidase accessory protein
YP_004109999.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azc:AZC_1341 TonB dependent receptor
YP_004110000.1	KEGG: bbt:BBta_4535 hypothetical protein
YP_004110001.1	KEGG: bja:blr2506 putative chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer
YP_004110002.1	TIGRFAM: hypothetical protein; KEGG: nwi:Nwi_2244 hypothetical protein
YP_004110003.1	KEGG: bbt:BBta_3012 hypothetical protein
YP_004110004.1	KEGG: bbt:BBta_3011 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004110005.1	SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: bbt:BBta_3010 diguanylate cyclase; PFAM: GGDEF domain containing protein
YP_004110006.1	PFAM: Protein of unknown function DUF2336; KEGG: nha:Nham_2660 hypothetical protein
YP_004110007.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE2140 TonB-dependent receptor protein
YP_004110008.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_2201 TonB-dependent receptor
YP_004110009.1	PFAM: protein of unknown function DUF1109; KEGG: bbt:BBta_3008 hypothetical protein
YP_004110010.1	KEGG: bja:blr3038 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004110011.1	KEGG: bja:bll3037 hypothetical protein
YP_004110012.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:bll3036 enoyl CoA hydratase
YP_004110013.1	KEGG: bbt:BBta_3004 putative outer TolC membrane protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein
YP_004110014.1	manually curated; KEGG: bbt:BBta_5457 hypothetical protein
YP_004110015.1	KEGG: bbt:BBta_2989 putative cation/heavy metal efflux system protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_004110016.1	KEGG: bja:blr3031 hypothetical protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004110017.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr3030 hypothetical protein
YP_004110018.1	KEGG: bja:blr4803 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004110019.1	KEGG: bja:blr4802 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004110020.1	PFAM: glycosyl transferase group 1; KEGG: bja:bll8163 glycosyl transferase
YP_004110021.1	PFAM: metallophosphoesterase; KEGG: bja:bll8164 hypothetical protein
YP_004110022.1	PFAM: SNARE associated Golgi protein; KEGG: bja:bll8165 putative alkaline phosphatase protein
YP_004110023.1	PFAM: ribosomal RNA adenine methylase transferase; KEGG: bja:bll8166 phospholipid N-methyltransferase
YP_004110024.1	SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: bja:blr3026 error-prone DNA polymerase; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type
YP_004110025.1	manually curated; KEGG: nha:Nham_2667 hypothetical protein
YP_004110026.1	KEGG: bra:BRADO2645 hypothetical protein
YP_004110027.1	KEGG: nwi:Nwi_2258 elongator protein 3/MiaB/NifB; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004110028.1	KEGG: bbt:BBta_2983 putative uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily
YP_004110029.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7827 ABC transporter substrate-binding protein
YP_004110030.1	PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein
YP_004110031.1	KEGG: nha:Nham_0659 hydroxypyruvate reductase; PFAM: MOFRL domain protein
YP_004110032.1	KEGG: bja:bll7624 adenylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase
YP_004110033.1	PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: bja:blr2614 hypothetical protein
YP_004110034.1	KEGG: bja:blr4053 hypothetical protein
YP_004110035.1	KEGG: bvi:Bcep1808_0573 hypothetical protein
YP_004110036.1	KEGG: bbt:BBta_7084 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004110037.1	PFAM: inner-membrane translocator; KEGG: bja:blr7832 ABC transporter permease protein
YP_004110038.1	KEGG: bbt:BBta_7086 ABC tranpsorter, permease protein / ATP-binding protein; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase
YP_004110039.1	KEGG: bja:blr7834 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110040.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dma:DMR_43780 GGDEF domain protein; SMART: GGDEF domain containing protein
YP_004110041.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7848 substrate-binding protein
YP_004110042.1	PFAM: thioesterase superfamily protein; KEGG: bbt:BBta_7090 putative 4-hydroxybenzoyl-CoA thioesterase
YP_004110043.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO0963 feruloyl-CoA synthase
YP_004110044.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_7093 enoyl-CoA hydratase
YP_004110045.1	KEGG: bja:blr7842 hypothetical protein
YP_004110046.1	KEGG: bja:blr7841 hypothetical protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004110047.1	KEGG: bbt:BBta_7097 TrapT family, DctQ subunit C4-dicarboxylate transport
YP_004110048.1	PFAM: Extracellular solute-binding protein, family 7; KEGG: vap:Vapar_3913 TRAP dicarboxylate transporter-DctP subunit
YP_004110049.1	TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; KEGG: bja:bll7838 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding
YP_004110050.1	PFAM: thioesterase superfamily protein; KEGG: pla:Plav_2272 thioesterase superfamily protein
YP_004110051.1	KEGG: bja:blr2961 hypothetical protein
YP_004110052.1	PFAM: Amidase; KEGG: bja:blr2960 amidase
YP_004110053.1	PFAM: protein of unknown function DUF35; KEGG: bja:bll2959 hypothetical protein
YP_004110054.1	KEGG: bra:BRADO2584 hypothetical protein
YP_004110055.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2583 putative short-chain dehydrogenase
YP_004110056.1	PFAM: OmpA/MotB domain protein; KEGG: ara:Arad_8433 OmpA/MotB domain protein
YP_004110057.1	PFAM: small multidrug resistance protein; KEGG: xau:Xaut_3102 small multidrug resistance protein
YP_004110058.1	KEGG: bbt:BBta_2928 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region
YP_004110059.1	KEGG: nha:Nham_4237 hypothetical protein
YP_004110060.1	PFAM: Uncharacterised protein family UPF0324; KEGG: bra:BRADO0268 hypothetical protein
YP_004110061.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bid:Bind_2471 LysR family transcriptional regulator
YP_004110062.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bja:bll4276 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver
YP_004110063.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr2951 acyl-CoA synthetase
YP_004110064.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr2950 enoyl-CoA hydratase
YP_004110065.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2577 putative oxidoreductase
YP_004110066.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO2576 acyl-CoA synthetase
YP_004110067.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO2575 putative acyl-CoA dehydrogenase
YP_004110068.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO2574 enoyl-CoA hydratase
YP_004110069.1	KEGG: bra:BRADO2573 hypothetical protein
YP_004110070.1	PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO2572 hypothetical protein
YP_004110071.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO2571 enoyl-CoA hydratase
YP_004110072.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_2917 putative reductase
YP_004110073.1	KEGG: bra:BRADO2565 acetyl-CoA acetyltransferase
YP_004110074.1	KEGG: bja:blr2929 hypothetical protein; PFAM: Xylose isomerase domain protein TIM barrel
YP_004110075.1	manually curated; KEGG: cyh:Cyan8802_3861 hypothetical protein
YP_004110076.1	manually curated; KEGG: afr:AFE_0072 hypothetical protein
YP_004110077.1	KEGG: bra:BRADO2543 high-affinity branched-chain amino acid transport protein (ABC transporter ATP-binding protein); PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110078.1	KEGG: bja:blr2925 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110079.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_2886 putative ABC transporter permiase component
YP_004110080.1	PFAM: inner-membrane translocator; KEGG: bja:blr2923 amino acid ABC transporter permease protein
YP_004110081.1	PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO2539 putative branched-chain amino acid ABC transporter (substrate-binding protein)
YP_004110082.1	PFAM: protein of unknown function DUF1445; KEGG: bra:BRADO2538 hypothetical protein
YP_004110083.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:bll2920 transcriptional regulatory protein
YP_004110084.1	TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bja:bll2919 allantoate amidohydrolase; PFAM: peptidase M20
YP_004110085.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bbt:BBta_2880 putative phosphoglycerate dehydrogenase
YP_004110086.1	KEGG: bur:Bcep18194_A5663 DNA translocase FtsK
YP_004110087.1	TIGRFAM: tartrate dehydrogenase; KEGG: bja:blr2916 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase
YP_004110088.1	PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_4762 extracellular ligand-binding receptor
YP_004110089.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_2878 short chain dehydrogenase
YP_004110090.1	TIGRFAM: beta-galactosidase; KEGG: bja:blr4657 beta-glucosidase; PFAM: glycoside hydrolase family 1
YP_004110091.1	PFAM: ABC transporter domain protein; KEGG: bra:BRADO1574 putative ABC transporter-like
YP_004110092.1	PFAM: Amidase; KEGG: bra:BRADO2532 putative amidotransferase
YP_004110093.1	PFAM: OsmC family protein; KEGG: bja:bll2902 hypothetical protein
YP_004110094.1	PFAM: fatty acid desaturase; KEGG: ccs:CCNA_03535 fatty acid desaturase
YP_004110095.1	KEGG: cyn:Cyan7425_4713 hypothetical protein
YP_004110096.1	KEGG: xau:Xaut_0907 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase; MaoC domain protein dehydratase
YP_004110097.1	KEGG: mno:Mnod_3363 phenylacetate degradation, enoyl-CoA hydratase PaaB; TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase
YP_004110098.1	KEGG: bra:BRADO2525 phenylacetic acid degradation protein; TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein
YP_004110099.1	TIGRFAM: phenylacetate-CoA ligase; KEGG: bja:blr2897 phenylacetate-coenzyme A ligase; PFAM: AMP-dependent synthetase and ligase
YP_004110100.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: bbt:BBta_2936 DNA-N1-methyladenine dioxygenase
YP_004110101.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:blr7836 transcriptional regulatory protein
YP_004110102.1	PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: dar:Daro_1523 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_004110103.1	KEGG: nha:Nham_0655 hypothetical protein
YP_004110104.1	KEGG: sil:SPO0412 hypothetical protein
YP_004110105.1	SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: msl:Msil_0486 diguanylate cyclase; PFAM: GGDEF domain containing protein
YP_004110106.1	KEGG: nha:Nham_0654 hypothetical protein
YP_004110107.1	KEGG: nha:Nham_0653 hypothetical protein
YP_004110108.1	KEGG: bbt:BBta_7109 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding
YP_004110109.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr7857 putative 3-hydroxybutyryl-CoA dehydratase
YP_004110110.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: met:M446_5547 transposase IS116/IS110/IS902 family protein
YP_004110111.1	PFAM: nitroreductase; KEGG: bbt:BBta_7115 hypothetical protein
YP_004110112.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO0936 putative acyl-CoA dehydrogenase
YP_004110113.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll7800 putative acyl-CoA dehydrogenase
YP_004110114.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll7801 putative dehydrogenase
YP_004110115.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_7119 acyl-CoA synthetase
YP_004110116.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO0932 putative enoyl-CoA hydratase
YP_004110117.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll7804 3-hydroxyacyl-CoA dehydrogenase type II
YP_004110118.1	PFAM: regulatory protein TetR; KEGG: bja:bll7805 transcriptional regulatory protein
YP_004110119.1	TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bra:BRADO0929 acetyl-CoA acetyltransferase; PFAM: Thiolase-like
YP_004110120.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr7807 acyl-CoA synthetase
YP_004110121.1	KEGG: bja:bll5248 hypothetical protein
YP_004110122.1	PFAM: Amidase; KEGG: bra:BRADO0922 amidase
YP_004110123.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll7899 putative acyl-CoA dehydrogenase
YP_004110124.1	PFAM: protein of unknown function DUF81; KEGG: bja:blr6618 hypothetical protein
YP_004110125.1	manually curated; KEGG: bra:BRADO0916 hypothetical protein
YP_004110126.1	PFAM: CinA domain protein; KEGG: bja:blr7909 hypothetical protein
YP_004110127.1	PFAM: Manganese/iron superoxide dismutase-like; KEGG: bra:BRADO6273 superoxide dismutase, iron/manganese cofactor
YP_004110128.1	PFAM: major facilitator superfamily MFS_1; KEGG: cti:RALTA_A1589 putative transporter, major facilitator superfamily MFS_1
YP_004110129.1	KEGG: bja:blr7776 cation efflux system protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE
YP_004110130.1	PFAM: Protein of unknown function DUF2147; KEGG: nwi:Nwi_0912 hypothetical protein
YP_004110132.1	PFAM: Aldehyde Dehydrogenase; KEGG: bja:blr7884 coniferyl aldehyde dehydrogenase
YP_004110133.1	KEGG: bra:BRADO6420 glucose-methanol-choline oxidoreductase family protein; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase
YP_004110134.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO6422 putative short-chain dehydrogenase/reductase protein; putative 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase)
YP_004110135.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_1210 putative 3-oxoacyl-(acyl-carrier-protein) reductase
YP_004110136.1	KEGG: bra:BRADO6997 two-component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_004110137.1	KEGG: bbt:BBta_0529 putative response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004110138.1	KEGG: pna:Pnap_4497 putative phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
YP_004110139.1	PFAM: transport-associated; KEGG: nha:Nham_1909 transport-associated
YP_004110140.1	KEGG: bbt:BBta_5336 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; UspA domain protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain
YP_004110141.1	PFAM: metallophosphoesterase; KEGG: bja:bll5683 serine/threonine phosphatase
YP_004110142.1	KEGG: bja:blr0497 hypothetical protein
YP_004110143.1	TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; KEGG: bchE; magnesium-protoporphyrin IX monomethyl ester anaerobic   oxidative cyclase; SMART: Elongator protein 3/MiaB/NifB
YP_004110144.1	KEGG: bra:BRADO1653 4-vinyl protochlorophyllide reductase; TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR
YP_004110145.1	TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: jan:Jann_3244 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004110146.1	KEGG: pth:PTH_1299 ATP-dependent Zn proteases
YP_004110147.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bra:BRADO6298 glyoxalase/bleomycin resistance protein
YP_004110148.1	PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein
YP_004110149.1	KEGG: nha:Nham_0414 hypothetical protein
YP_004110150.1	PFAM: protein of unknown function DUF156; KEGG: bbt:BBta_0207 hypothetical protein
YP_004110151.1	TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO0147 copper-transporting P-type ATPase; SMART: TRASH domain protein
YP_004110152.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: bbt:BBta_4024 hypothetical protein
YP_004110153.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: azc:AZC_1071 hypothetical protein
YP_004110154.1	KEGG: bja:blr5311 histon H1
YP_004110155.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nha:Nham_2861 diguanylate cyclase; SMART: GGDEF domain containing protein
YP_004110156.1	PFAM: high-affinity nickel-transporter; KEGG: sal:Sala_3212 high-affinity nickel-transporter
YP_004110157.1	KEGG: bja:bll2304 ABC transporter substrate-binding protein
YP_004110158.1	PFAM: aldo/keto reductase; KEGG: bbt:BBta_0931 putative oxidoreductase (aldo/keto reductase)
YP_004110159.1	KEGG: bra:BRADO3674 hypothetical protein
YP_004110160.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr4312 hypothetical protein
YP_004110161.1	PFAM: plasmid stabilization system; KEGG: rce:RC1_0081 plasmid stabilization system protein, RelE
YP_004110162.1	TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: rce:RC1_0082 transcriptional regulators (CopG/Arc/MetJ DNA-binding domain), putative
YP_004110163.1	KEGG: xau:Xaut_4228 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110164.1	PFAM: protein of unknown function DUF214; KEGG: bbt:BBta_1848 putative lipoprotein-releasing system transmembrane protein LolC
YP_004110165.1	KEGG: xau:Xaut_4226 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004110166.1	PFAM: alpha/beta hydrolase fold; KEGG: mno:Mnod_5961 alpha/beta hydrolase fold protein
YP_004110167.1	KEGG: nha:Nham_2805 hypothetical protein
YP_004110168.1	KEGG: sus:Acid_3191 ribulose-5-phosphate 3-epimerase
YP_004110169.1	KEGG: abo:ABO_0204 hypothetical protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein
YP_004110170.1	TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PFAM: GGDEF domain containing protein; Hemerythrin HHE cation binding domain protein; KEGG: nha:Nham_2322 diguanylate cyclase; SMART: GGDEF domain containing protein
YP_004110171.1	KEGG: mlo:mll6710 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain
YP_004110172.1	manually curated; KEGG: mno:Mnod_8411 hypothetical protein
YP_004110173.1	KEGG: rec:RHECIAT_PB0000171 putative excisonase protein
YP_004110174.1	TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; Hemerythrin HHE cation binding domain protein; KEGG: rsq:Rsph17025_2184 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: GGDEF domain containing protein
YP_004110175.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2214 hypothetical protein
YP_004110176.1	KEGG: bja:bll2207 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein
YP_004110177.1	KEGG: bbt:BBta_6528 hypothetical protein
YP_004110178.1	PFAM: Anti-sigma K factor RskA; KEGG: bbt:BBta_6529 hypothetical protein
YP_004110179.1	KEGG: bra:BRADO1500 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004110180.1	TIGRFAM: flagellar export protein FliJ; KEGG: bbt:BBta_6531 putative flagelar FliJ protein
YP_004110181.1	TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: bja:blr2201 flagellum-specific ATP synthase; SMART: AAA ATPase
YP_004110182.1	KEGG: oca:OCAR_7111 cell cycle transcriptional regulator CtrA; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004110183.1	PFAM: MCP methyltransferase CheR-type; KEGG: nha:Nham_3372 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type
YP_004110184.1	SMART: response regulator receiver; manually curated; KEGG: bbt:BBta_6556 chemotaxis-specific methylesterase; PFAM: CheB methylesterase; response regulator receiver
YP_004110185.1	KEGG: bbt:BBta_6557 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004110186.1	KEGG: bra:BRADO1474 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein
YP_004110187.1	KEGG: bbt:BBta_0524 chemotaxis protein CheA; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; response regulator receiver; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; response regulator receiver
YP_004110188.1	PFAM: Protein of unknown function DUF2328; KEGG: bja:blr2191 hypothetical protein
YP_004110189.1	PFAM: inositol monophosphatase; KEGG: nwi:Nwi_0518 inositol monophosphatase
YP_004110190.1	KEGG: nha:Nham_3379 hypothetical protein
YP_004110191.1	PFAM: conserved hypothetical protein; KEGG: bja:bll2189 hypothetical protein
YP_004110192.1	KEGG: bra:BRADO1468 hypothetical protein
YP_004110193.1	manually curated; KEGG: shl:Shal_1751 hypothetical protein
YP_004110194.1	KEGG: mtb:TBMG_01424 hypothetical protein
YP_004110195.1	KEGG: bja:bll7047 hypothetical protein
YP_004110196.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: nha:Nham_3384 hypothetical protein
YP_004110197.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bbt:BBta_6654 hypothetical protein
YP_004110198.1	KEGG: bja:blr7233 hypothetical protein
YP_004110200.1	PFAM: Methyltransferase type 11; KEGG: rlg:Rleg_2561 methyltransferase type 11
YP_004110201.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_6658 isovaleryl-CoA dehydrogenase
YP_004110202.1	PFAM: cytochrome P450; KEGG: bja:blr7243 putative cytochrome P450
YP_004110203.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO1442 acyl-CoA dehydrogenase
YP_004110204.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bra:BRADO1441 formyl-coenzyme A transferase NAD(P)-binding
YP_004110205.1	KEGG: bra:BRADO1440 hypothetical protein
YP_004110206.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: bja:blr7248 benzoylformate decarboxylase
YP_004110207.1	PFAM: beta-lactamase; KEGG: bja:bll5709 hypothetical protein
YP_004110208.1	manually curated; PFAM: Appr-1-p processing domain protein; KEGG: bbt:BBta_5392 hypothetical protein; SMART: Appr-1-p processing domain protein
YP_004110209.1	manually curated; TIGRFAM: glutaredoxin-like protein; KEGG: bbt:BBta_5393 putative glutaredoxin family protein; PFAM: glutaredoxin
YP_004110210.1	PFAM: protein of unknown function DUF323; KEGG: bbt:BBta_5394 hypothetical protein
YP_004110211.1	KEGG: nha:Nham_1639 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260
YP_004110212.1	KEGG: mno:Mnod_6017 hypothetical protein
YP_004110213.1	PFAM: BolA family protein; KEGG: bja:bsl5715 hypothetical protein
YP_004110214.1	KEGG: bbt:BBta_5398 hypothetical protein; manually curated; PFAM: protein of unknown function DUF427
YP_004110215.1	PFAM: acyltransferase 3; KEGG: bbt:BBta_5400 hypothetical protein
YP_004110216.1	TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: nha:Nham_1636 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein
YP_004110217.1	KEGG: rfr:Rfer_1328 tryptophan synthase subunit beta; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit
YP_004110218.1	TIGRFAM: glutamate racemase; KEGG: bbt:BBta_5384 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_004110219.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: bja:blr5704 hypothetical protein
YP_004110220.1	KEGG: bja:blr5705 hypothetical protein
YP_004110221.1	KEGG: cyc:PCC7424_5686 hypothetical protein
YP_004110222.1	KEGG: ypz:YPZ3_pMT0050 hypothetical protein
YP_004110223.1	TIGRFAM: ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; KEGG: nha:Nham_1644 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein
YP_004110224.1	KEGG: bbt:BBta_5390 putative L-allo-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_004110225.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll7251 putative dehydrogenase
YP_004110226.1	PFAM: Hly-III family protein; KEGG: oca:OCAR_5063 hemolysin-3 (hemolysin III) (Hly-III)
YP_004110227.1	PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: nwi:Nwi_3019 YcjX-like protein
YP_004110228.1	PFAM: Uncharacterised protein family UPF0283; KEGG: bra:BRADO1432 hypothetical protein
YP_004110229.1	manually curated; PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bra:BRADO1430 ferredoxin:adenylate/guanylate cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase
YP_004110230.1	KEGG: nha:Nham_3393 hypothetical protein
YP_004110231.1	KEGG: nha:Nham_3397 hypothetical protein
YP_004110232.1	KEGG: nwi:Nwi_3055 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase
YP_004110233.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbt:BBta_6680 acyl-coenzyme A transferase
YP_004110234.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bja:blr3195 ferredoxin NADP+ reductase
YP_004110235.1	KEGG: bja:bll7264 hypothetical protein
YP_004110236.1	PFAM: Glutathione S-transferase domain; KEGG: pla:Plav_3102 glutathione S-transferase domain-containing protein
YP_004110237.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aav:Aave_3336 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004110238.1	PFAM: protein of unknown function UPF0074; KEGG: rcu:RCOM_1954690 hypothetical protein
YP_004110239.1	PFAM: protein of unknown function DUF477; KEGG: bja:bll7265 hypothetical protein
YP_004110240.1	PFAM: protein of unknown function DUF477; KEGG: bbt:BBta_6688 hypothetical protein
YP_004110241.1	PFAM: LemA family protein; KEGG: bja:bll7267 lipoprotein
YP_004110242.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bja:bll7271 carbon monoxide dehydrogenase large chain
YP_004110243.1	PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll7272 putative dihydrodipicolinate synthase
YP_004110244.1	KEGG: bbt:BBta_0542 peptidase S9A family; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller
YP_004110245.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bja:bll1235 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_004110246.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:bll1234 putative hydolase
YP_004110247.1	TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; KEGG: bra:BRADO1661 CbbX-like protein; SMART: AAA ATPase
YP_004110248.1	KEGG: bbt:BBta_6396 ribulose 1,5-bisphosphate carboxylase small subunit; PFAM: ribulose bisphosphate carboxylase small chain
YP_004110249.1	KEGG: bbt:BBta_6397 ribulose bisophosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like
YP_004110250.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; CHASE domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: xal:XALc_1974 putative two-component system sensor-response regulator hybrid protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver
YP_004110251.1	KEGG: gem:GM21_1722 histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004110252.1	KEGG: mlo:mlr6690 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004110254.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nha:Nham_3755 LysR family transcriptional regulator
YP_004110255.1	TIGRFAM: 5-aminolevulinic acid synthase; KEGG: bra:BRADO1651 5-aminolevulinate synthase; PFAM: aminotransferase class I and II
YP_004110256.1	TIGRFAM: photosynthetic complex assembly protein 2; KEGG: bbt:BBta_6406 hypothetical protein
YP_004110257.1	TIGRFAM: magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase; KEGG: bra:BRADO1649 magnesium-protoporphyrin IX monomethyl ester cyclase; PFAM: Rubrerythrin
YP_004110258.1	KEGG: mdi:METDI5864 hypothetical protein
YP_004110259.1	TIGRFAM: photosynthetic complex assembly protein; KEGG: bbt:BBta_6409 hypothetical protein
YP_004110260.1	KEGG: mex:Mext_4809 putative photosynthetic complex assembly protein
YP_004110261.1	KEGG: bbt:BBta_6411 reaction center protein H chain (photosynthetic reaction center H subunit); TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit ; PRC-barrel domain protein
YP_004110262.1	PFAM: PUCC protein; KEGG: bra:BRADO1644 photosynthetic complex (LH1) assembly protein LhaA
YP_004110263.1	TIGRFAM: magnesium protoporphyrin O-methyltransferase; KEGG: alv:Alvin_2638 magnesium protoporphyrin O-methyltransferase; PFAM: Magnesium-protoporphyrin IX methyltransferase domain protein
YP_004110264.1	TIGRFAM: light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; KEGG: bbt:BBta_6414 protochlorophyllide reductase iron-sulfur ATP-binding protein; PFAM: NifH/frxC-family protein
YP_004110265.1	TIGRFAM: magnesium chelatase, H subunit; KEGG: rce:RC1_2113 magnesium chelatase subunit H; PFAM: CobN/magnesium chelatase
YP_004110266.1	KEGG: rce:RC1_2114 light-independent protochlorophyllide reductase subunit B; TIGRFAM: light-independent protochlorophyllide reductase, B subunit; PFAM: oxidoreductase/nitrogenase component 1; Proto-chlorophyllide reductase 57 kD subunit
YP_004110267.1	KEGG: bbt:BBta_6417 light-independent protochlorophyllide reductase subunit N; TIGRFAM: light-independent protochlorophyllide reductase, N subunit; PFAM: oxidoreductase/nitrogenase component 1
YP_004110268.1	KEGG: bra:BRADO1638 2-vinyl bacteriochlorophyllide hydratase; TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase; PFAM: 2-vinyl bacteriochlorophyllide hydratase
YP_004110269.1	KEGG: rce:RC1_2117 coenzyme B12-binding aerobic repressor
YP_004110270.1	KEGG: bra:BRADO1626 heme oxygenase; PFAM: Haem oxygenase-like
YP_004110271.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold-2 domain protein; GAF domain protein; Phytochrome central region domain protein; PAS fold domain protein; KEGG: bbt:BBta_6428 bacteriophytochrome; SMART: GAF domain protein
YP_004110272.1	TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold-4 domain protein; KEGG: bra:BRADO1629 transcriptional regulator PpsR2; SMART: PAS domain containing protein
YP_004110273.1	PFAM: cytochrome c class I; KEGG: bra:BRADO1630 cytochrome c2
YP_004110274.1	KEGG: bbt:BBta_6425 hypothetical protein
YP_004110275.1	PFAM: TspO/MBR family protein; KEGG: mpt:Mpe_A2778 tryptophan-rich sensory protein
YP_004110276.1	KEGG: bra:BRADO1632 geranylgeranyl reductase; TIGRFAM: geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase
YP_004110277.1	PFAM: PUCC protein; KEGG: bbt:BBta_6423 light harvesting pigment major facilitator family (MFS) transporter, Bch2-like protein
YP_004110278.1	KEGG: alv:Alvin_2645 bacteriochlorophyll/chlorophyll synthetase; TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase
YP_004110279.1	TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold domain protein; PAS fold-4 domain protein; KEGG: rce:RC1_2118 transcriptional regulator CrtJ (homologous to PpsR); SMART: PAS domain containing protein
YP_004110280.1	KEGG: bra:BRADO1625 photosynthetic reaction center M protein; TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein
YP_004110281.1	KEGG: bbt:BBta_6431 photosynthetic reaction center subunit L; TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein
YP_004110282.1	PFAM: antenna complex alpha/beta subunit; KEGG: bra:BRADO1623 light harvesting 1 alpha subunit
YP_004110283.1	PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_6433 light harvesting 1 beta subunit
YP_004110284.1	KEGG: met:M446_3700 hypothetical protein
YP_004110285.1	KEGG: bra:BRADO1620 bacteriochlorophyllide reductase Z subunit; TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1
YP_004110286.1	TIGRFAM: chlorophyllide reductase subunit Y; KEGG: bbt:BBta_6436 bacteriochlorophyllide reductase subunit
YP_004110287.1	TIGRFAM: chlorophyllide reductase iron protein subunit X; KEGG: mrd:Mrad2831_2818 chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein
YP_004110288.1	KEGG: rce:RC1_2093 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase, putative; TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein
YP_004110289.1	PFAM: O-methyltransferase family 2; KEGG: rce:RC1_2092 hydroxyneurosporene methyltransferase
YP_004110290.1	PFAM: Polyprenyl synthetase; KEGG: bra:BRADO1615 geranylgeranyl pyrophosphate synthetase (GgpP synthetase) (farnesyltranstransferase)
YP_004110291.1	KEGG: bra:BRADO1614 hydroxyneurosporene and rhodopin dehydrogenase; TIGRFAM: phytoene desaturase; PFAM: FAD dependent oxidoreductase
YP_004110292.1	PFAM: hydroxyneurosporene synthase; KEGG: bbt:BBta_6442 hydroxyneurosporene synthase
YP_004110293.1	KEGG: nwi:Nwi_1053 excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein
YP_004110294.1	KEGG: bbt:BBta_6443 hypothetical protein
YP_004110295.1	KEGG: bbt:BBta_6443 hypothetical protein
YP_004110296.1	KEGG: pzu:PHZ_c2874 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase
YP_004110297.1	KEGG: rce:RC1_2086 phytoene synthase; PFAM: Squalene/phytoene synthase
YP_004110298.1	KEGG: bra:BRADO1610 phytoene dehydrogenase (phytoene desaturase); TIGRFAM: phytoene desaturase; PFAM: amine oxidase
YP_004110299.1	KEGG: bra:BRADO1609 putative alpha/beta hydrolase, putative protoporphyrin IX magnesium chelatase BchO-like; TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold
YP_004110300.1	PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO1608 putative alpha/beta hydrolase fold
YP_004110301.1	TIGRFAM: uroporphyrinogen decarboxylase; KEGG: nha:Nham_2936 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D)
YP_004110302.1	PFAM: type IV pilus assembly PilZ; KEGG: bra:BRADO5217 hypothetical protein
YP_004110303.1	KEGG: rce:RC1_2082 magnesium chelatase subunit D; TIGRFAM: magnesium chelatase ATPase subunit D; SMART: von Willebrand factor type A
YP_004110304.1	SMART: AAA ATPase; TIGRFAM: magnesium chelatase ATPase subunit I; KEGG: rce:RC1_2081 magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase ChlI subunit
YP_004110305.1	KEGG: bra:BRADO1874 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase
YP_004110306.1	KEGG: nha:Nham_1076 hypothetical protein
YP_004110307.1	KEGG: msl:Msil_2066 dienelactone hydrolase
YP_004110308.1	PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: rce:RC1_2526 hypothetical protein
YP_004110309.1	PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: rce:RC1_0144 coenzyme F420 hydrogenase
YP_004110310.1	PFAM: Protein of unknown function DUF2383; KEGG: bra:BRADO4339 putative ribonucleotide reductase
YP_004110311.1	KEGG: bra:BRADO6559 hypothetical protein
YP_004110312.1	KEGG: bja:blr1516 RND multidrug efflux transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein
YP_004110313.1	KEGG: bja:blr1515 RND multidrug efflux membrane permease; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004110314.1	PFAM: FAD dependent oxidoreductase; KEGG: pzu:PHZ_c1914 flavin binding monooxygenase
YP_004110315.1	KEGG: bcr:BCAH187_A0933 hypothetical protein
YP_004110316.1	KEGG: bbt:BBta_3084 hypothetical protein
YP_004110317.1	PFAM: PUCC protein; KEGG: bbt:BBta_3083 chlorophyll major facilitator superfamily (MFS) exporter PucC
YP_004110318.1	PFAM: antenna complex alpha/beta subunit; KEGG: hha:Hhal_1408 antenna complex, alpha/beta subunit
YP_004110319.1	PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_3081 light harvesting protein B-800-850
YP_004110320.1	KEGG: bbt:BBta_3080 bacteriophytochrome; PFAM: GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein
YP_004110321.1	KEGG: bbt:BBta_3079 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_004110322.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr2779 hypothetical protein
YP_004110323.1	KEGG: ace:Acel_0511 hypothetical protein
YP_004110324.1	PFAM: NnrS family protein; KEGG: bja:bll7083 hypothetical protein
YP_004110325.1	KEGG: NnrU family protein
YP_004110326.1	KEGG: bja:blr2389 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase
YP_004110327.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:blr6127 hypothetical protein
YP_004110328.1	KEGG: msl:Msil_3741 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004110329.1	PFAM: metallophosphoesterase; KEGG: bbt:BBta_5850 hypothetical protein
YP_004110330.1	KEGG: bbt:BBta_5851 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_004110331.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO5360 molybdenum ABC transporter permease
YP_004110332.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_5853 putative permease protein
YP_004110333.1	PFAM: extracellular solute-binding protein family 1; KEGG: bra:BRADO5362 iron ABC transporter
YP_004110334.1	KEGG: apb:SAR116_0099 hypothetical protein
YP_004110335.1	KEGG: ddr:Deide_2p01890 putative phosphate ABC transporter, permease component, PstC
YP_004110336.1	KEGG: cwo:Cwoe_3413 hypothetical protein
YP_004110337.1	PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_0716 peptide/oligopeptide/nickel ABC transporter substrate-binding protein
YP_004110338.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr1037 ABC transporter permease protein
YP_004110339.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_0718 putative dipeptide/oligopeptide/nickel ABC transporter, permease protein
YP_004110340.1	KEGG: bja:blr1039 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase
YP_004110341.1	KEGG: bja:bsr1040 hypothetical protein
YP_004110342.1	KEGG: bbt:BBta_0721 amidase; TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase
YP_004110343.1	KEGG: bra:BRADO6817 hypothetical protein
YP_004110344.1	KEGG: bbt:BBta_0723 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004110345.1	KEGG: bbt:BBta_0724 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase
YP_004110346.1	PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: ret:RHE_CH02492 chloride channel protein
YP_004110347.1	KEGG: bbt:BBta_4584 putative gamma-glutamyl hydrolase family protein; PFAM: peptidase C26
YP_004110348.1	TIGRFAM: dihydroxy-acid dehydratase; KEGG: bja:bll4536 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_004110349.1	PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rlt:Rleg2_2385 cobalamin synthesis protein P47K
YP_004110350.1	manually curated; KEGG: azc:AZC_2320 hypothetical protein
YP_004110351.1	KEGG: bja:blr3217 NorD protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A
YP_004110352.1	PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bja:blr3216 NorQ protein
YP_004110353.1	KEGG: bja:blr3215 nitric oxide reductase subunit B; PFAM: cytochrome c oxidase subunit I
YP_004110354.1	KEGG: bmr:BMI_II242 nitric-oxide reductase, small subunit
YP_004110355.1	KEGG: bja:bsr3213 hypothetical protein
YP_004110356.1	PFAM: cytochrome c oxidase subunit III; KEGG: bbt:BBta_2086 NorE protein involved in nitric oxide reduction
YP_004110357.1	KEGG: bra:BRADO1773 putative signal peptide
YP_004110358.1	KEGG: bja:blr2724 hypothetical protein
YP_004110359.1	PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; carboxyl transferase; KEGG: bja:bll7292 pyruvate carboxylase
YP_004110360.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll7293 acyl-CoA synthetase
YP_004110361.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3435 binding-protein-dependent transport systems inner membrane component
YP_004110362.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3428 binding-protein-dependent transport systems inner membrane component
YP_004110363.1	PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_3427 extracellular solute-binding protein
YP_004110364.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: vei:Veis_3426 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004110365.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: vei:Veis_3425 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase
YP_004110366.1	KEGG: adg:Adeg_2096 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH
YP_004110367.1	KEGG: bbt:BBta_2219 hypothetical protein
YP_004110368.1	PFAM: NLPA lipoprotein; KEGG: azl:AZL_d03570 D-methionine transport system substrate-binding protein
YP_004110369.1	KEGG: azo:azo2395 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase
YP_004110370.1	PFAM: Integrase catalytic region; KEGG: swi:Swit_2359 integrase catalytic subunit
YP_004110371.1	KEGG: bra:BRADO4285 D-methionine ABC transporter protein, periplasmic binding protein; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein
YP_004110372.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1144 binding-protein-dependent transport systems inner membrane component
YP_004110373.1	KEGG: azc:AZC_3691 ABC transporter ATP-binding protein; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase
YP_004110374.1	KEGG: msl:Msil_2419 serine O-acetyltransferase
YP_004110375.1	KEGG: mag:amb1849 cysteine desulfurase 1; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V
YP_004110376.1	KEGG: azl:AZL_a00930 hypothetical protein
YP_004110377.1	KEGG: bbt:BBta_3429 hypothetical protein
YP_004110378.1	KEGG: bbt:BBta_3428 hypothetical protein
YP_004110379.1	KEGG: bbt:BBta_p0060 secretion protein HlyD precursor; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004110380.1	KEGG: bbt:BBta_p0061 RND family outer membrane copper/silver/drug transport protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_004110381.1	PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rec:RHECIAT_PC0000303 putative alcohol dehydrogenase protein
YP_004110382.1	PFAM: protein of unknown function DUF892; KEGG: bra:BRADO5518 hypothetical protein
YP_004110383.1	PFAM: isochorismatase hydrolase; KEGG: pde:Pden_1636 isochorismatase hydrolase
YP_004110384.1	KEGG: mes:Meso_0331 hypothetical protein
YP_004110385.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_PC0000304 putative oxidoreductase protein
YP_004110386.1	PFAM: protein of unknown function DUF72; KEGG: bbt:BBta_4267 hypothetical protein
YP_004110388.1	KEGG: mdi:METDI3542 putative manganese catalase; PFAM: manganese containing catalase
YP_004110389.1	KEGG: mpo:Mpop_2886 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp
YP_004110390.1	PFAM: HWE histidine kinase; KEGG: mrd:Mrad2831_0197 putative signal transduction histidine kinase
YP_004110391.1	KEGG: ptr:459066 intersectin 2
YP_004110392.1	SMART: response regulator receiver; KEGG: mno:Mnod_6449 response regulator receiver protein
YP_004110393.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nwi:Nwi_2662 short-chain dehydrogenase/reductase SDR
YP_004110394.1	PFAM: protein of unknown function DUF378; KEGG: bra:BRADO1751 hypothetical protein
YP_004110395.1	KEGG: bra:BRADO4332 hypothetical protein
YP_004110396.1	KEGG: bra:BRADO1771 putative signal peptide
YP_004110397.1	TIGRFAM: benzoyl-CoA oxygenase, B subunit; KEGG: bja:blr1081 benzoyl-CoA oxygenase component
YP_004110398.1	KEGG: bja:blr1080 benzoyl-CoA-dihydrodiol lyase; TIGRFAM: benzoyl-CoA-dihydrodiol lyase; PFAM: Enoyl-CoA hydratase/isomerase
YP_004110399.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:blr1078 putative hydrolase
YP_004110400.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sti:Sthe_2859 alcohol dehydrogenase zinc-binding domain protein
YP_004110401.1	KEGG: sil:SPOA0323 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp
YP_004110402.1	KEGG: eba:ebA3602 4-hydroxybenzoyl-CoA reductase, beta subunit; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, beta subunit; PFAM: molybdopterin dehydrogenase FAD-binding
YP_004110403.1	KEGG: eba:ebA3603 4-hydroxybenzoyl-CoA reductase, alpha subunit; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, alpha subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead
YP_004110404.1	KEGG: eba:ebA3604 4-hydroxybenzoyl-CoA reductase, gamma subunit; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, gamma subunit; PFAM: [2Fe-2S]-binding domain protein; ferredoxin
YP_004110405.1	KEGG: bja:blr1077 acetyl-CoA synthetase; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase
YP_004110406.1	PFAM: Extracellular ligand-binding receptor; KEGG: lch:Lcho_3653 extracellular ligand-binding receptor
YP_004110407.1	PFAM: inner-membrane translocator; KEGG: pna:Pnap_1906 inner-membrane translocator
YP_004110408.1	KEGG: xau:Xaut_2704 ABC transporter related; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase
YP_004110409.1	KEGG: mag:amb2870 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110410.1	PFAM: GCN5-related N-acetyltransferase; KEGG: gme:Gmet_2096 GCN5-related N-acetyltransferase
YP_004110411.1	KEGG: mag:amb3391 transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074
YP_004110412.1	KEGG: tmz:Tmz1t_2947 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004110413.1	KEGG: lch:Lcho_3655 benzoate-CoA ligase family; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase
YP_004110414.1	TIGRFAM: benzoyl-CoA reductase, subunit D; CoA-substrate-specific enzyme activase; KEGG: tmz:Tmz1t_2948 benzoyl-CoA reductase, subunit D; PFAM: ATPase BadF/BadG/BcrA/BcrD type
YP_004110415.1	TIGRFAM: benzoyl-CoA reductase, subunit A; CoA-substrate-specific enzyme activase; KEGG: mag:amb2139 2-hydroxyglutaryl-CoA dehydratase activator protein; PFAM: ATPase BadF/BadG/BcrA/BcrD type
YP_004110416.1	TIGRFAM: benzoyl-CoA reductase, subunit B; KEGG: tmz:Tmz1t_2950 benzoyl-CoA reductase, subunit B; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component
YP_004110417.1	TIGRFAM: benzoyl-CoA reductase, subunit C; KEGG: tmz:Tmz1t_2951 benzoyl-CoA reductase, subunit C; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component
YP_004110418.1	PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: lch:Lcho_2743 alcohol dehydrogenase
YP_004110419.1	manually curated; PFAM: regulatory protein MarR; KEGG: reu:Reut_B3914 MarR family transcriptional regulator; SMART: regulatory protein MarR
YP_004110420.1	KEGG: lch:Lcho_1185 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; TIGRFAM: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR
YP_004110421.1	KEGG: pna:Pnap_2124 naphthoate synthase; TIGRFAM: 2-ketocyclohexanecarboxyl-CoA hydrolase; PFAM: Enoyl-CoA hydratase/isomerase
YP_004110422.1	KEGG: reu:Reut_B3917 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal; TIGRFAM: cyclohexanecarboxyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein
YP_004110423.1	KEGG: lch:Lcho_1188 cyclohexanecarboxylate-CoA ligase; TIGRFAM: cyclohexanecarboxylate-CoA ligase; PFAM: AMP-dependent synthetase and ligase
YP_004110424.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: lch:Lcho_1190 enoyl-CoA hydratase/isomerase
YP_004110425.1	PFAM: Hemolysin-type calcium-binding region; KEGG: met:M446_1696 metallophosphoesterase
YP_004110426.1	KEGG: amr:AM1_E0108 hypothetical protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: glycerophosphoryl diester phosphodiesterase; Hemolysin-type calcium-binding region
YP_004110427.1	manually curated; PFAM: regulatory protein DeoR; KEGG: dat:HRM2_41360 GlpR1; SMART: regulatory protein DeoR
YP_004110428.1	PFAM: 5'-Nucleotidase domain protein; Endonuclease/exonuclease/phosphatase; Hemolysin-type calcium-binding region; KEGG: syp:SYNPCC7002_G0067 endonuclease/exonuclease/phosphatase family protein
YP_004110429.1	TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; KEGG: met:M446_3382 type I secretion system ATPase; SMART: AAA ATPase
YP_004110430.1	KEGG: met:M446_3383 HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein
YP_004110431.1	KEGG: bbt:BBta_0545 putative nuclease-like protein; PFAM: Rare lipoprotein A; nuclease (SNase domain protein); SMART: nuclease (SNase domain protein)
YP_004110432.1	KEGG: bra:BRADO5892 putative signal peptide
YP_004110433.1	KEGG: bra:BRADO5893 putative N-methyltransferase; putative phosphatidylethanolamine or menaquinone biosynthesis methyltransferase (UbiE); PFAM: Methyltransferase type 11
YP_004110434.1	TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: nwi:Nwi_0603 tRNA-specific 2-thiouridylase MnmA
YP_004110435.1	PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: bja:blr6996 hypothetical protein
YP_004110436.1	PFAM: flagellar hook capping protein; KEGG: nha:Nham_0693 flagellar hook capping protein
YP_004110437.1	TIGRFAM: lytic murein transglycosylase; KEGG: nha:Nham_2862 lytic murein transglycosylase
YP_004110438.1	KEGG: bra:BRADO1363 hypothetical protein
YP_004110439.1	KEGG: bbt:BBta_4318 putative intracellular proteinase; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein
YP_004110440.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: cti:RALTA_A1510 conserved hypothetical protein, RmlC-like cupin domain
YP_004110441.1	KEGG: ccs:CCNA_01509 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein
YP_004110442.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_2588 short-chain dehydrogenase/reductase SDR
YP_004110443.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: tmz:Tmz1t_2273 diguanylate cyclase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein
YP_004110444.1	KEGG: mpo:Mpop_4695 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; SMART: ATP-binding region ATPase domain protein
YP_004110445.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: neu:NE1365 helix-hairpin-helix DNA-binding motif-containing protein; SMART: helix-turn-helix domain protein
YP_004110446.1	PFAM: YcfA family protein; KEGG: mrb:Mrub_0742 YcfA family protein
YP_004110447.1	PFAM: Domain of unknown function DUF1902; KEGG: ttj:TTHA1013 hypothetical protein
YP_004110448.1	KEGG: bbt:BBta_6775 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein
YP_004110449.1	TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase, DnaB-helicase binding domain; KEGG: bja:bll7350 DNA primase; SMART: Toprim sub domain protein; zinc finger CHC2-family protein
YP_004110450.1	KEGG: mgr:MGG_04377 hypothetical protein
YP_004110451.1	PFAM: AIG2 family protein; KEGG: bja:bll7352 hypothetical protein
YP_004110452.1	PFAM: N-formylglutamate amidohydrolase; KEGG: bbt:BBta_6779 hypothetical protein
YP_004110453.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bja:bll7356 putative efflux protein
YP_004110454.1	PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: bja:bll7362 hypothetical protein
YP_004110455.1	PFAM: Protein of unknown function; KEGG: nha:Nham_2870 hypothetical protein
YP_004110456.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:bll7370 hydrolase
YP_004110457.1	KEGG: bja:blr7371 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain
YP_004110458.1	PFAM: thioesterase superfamily protein; KEGG: bja:bll1207 hypothetical protein
YP_004110459.1	KEGG: bra:BRADO1333 hypothetical protein
YP_004110460.1	PFAM: Ferritin Dps family protein; KEGG: bra:BRADO1329 putative DNA-binding stress protein (oxydative damage protectant)
YP_004110461.1	PFAM: Methyltransferase type 12; KEGG: bbt:BBta_6798 putative S-adenosyl-L-methionine-dependent methyltransferase
YP_004110462.1	KEGG: nha:Nham_0686 exodeoxyribonuclease V
YP_004110463.1	KEGG: bja:bll5557 hypothetical protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein
YP_004110464.1	PFAM: protein of unknown function DUF1488; KEGG: bja:bsl0168 hypothetical protein
YP_004110465.1	KEGG: bbt:BBta_1870 hypothetical protein
YP_004110466.1	KEGG: nha:Nham_0687 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: AAA ATPase; response regulator receiver
YP_004110467.1	KEGG: nwi:Nwi_0596 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein
YP_004110468.1	KEGG: bja:blr7001 flagellar assembly protein H
YP_004110469.1	KEGG: nha:Nham_0690 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG
YP_004110470.1	KEGG: nha:Nham_0691 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein
YP_004110471.1	PFAM: protein of unknown function DUF1153; KEGG: oca:OCAR_5210 flag1
YP_004110472.1	KEGG: bja:blr7780 hypothetical protein
YP_004110473.1	PFAM: FAD linked oxidase domain protein; KEGG: cwo:Cwoe_1045 FAD linked oxidase domain protein
YP_004110474.1	PFAM: UspA domain protein; KEGG: oca:OCAR_5193 universal stress protein
YP_004110475.1	KEGG: pde:Pden_5102 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase
YP_004110476.1	KEGG: cnb:CNBF0590 hypothetical protein
YP_004110477.1	KEGG: cobalamin 5'-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS
YP_004110478.1	KEGG: bbt:BBta_0660 putative formamidase regulatory protein FmdB; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB
YP_004110479.1	KEGG: bbt:BBta_0659 formamidase (formamide amidohydrolase); PFAM: Acetamidase/Formamidase
YP_004110480.1	TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: bbt:BBta_0658 putative branched-chain amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase
YP_004110481.1	KEGG: bja:blr0970 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related
YP_004110482.1	KEGG: bja:blr0969 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator
YP_004110483.1	KEGG: bja:blr0968 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator
YP_004110484.1	TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bra:BRADO6897 branched chain amino-acid ABC transporter substrate-binding protein
YP_004110485.1	KEGG: bja:bll0966 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver
YP_004110486.1	KEGG: bra:BRADO6899 CheY/LuxR family two-component transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_004110487.1	manually curated; TIGRFAM: ribonuclease BN; KEGG: bja:blr7476 hypothetical protein; PFAM: ribonuclease BN
YP_004110488.1	KEGG: noc:Noc_1592 hypothetical protein
YP_004110489.1	KEGG: nha:Nham_3878 hypothetical protein
YP_004110490.1	KEGG: nha:Nham_3877 hypothetical protein
YP_004110491.1	KEGG: nha:Nham_3876 hypothetical protein
YP_004110492.1	PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_5258 AMP-dependent synthetase and ligase
YP_004110493.1	TIGRFAM: TonB family protein; KEGG: bja:bll7071 TonB protein
YP_004110494.1	KEGG: bja:bll7072 biopolymer transport protein; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR
YP_004110495.1	KEGG: bja:bll7073 biopolymer transport protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel
YP_004110496.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr7268 enoyl-CoA hydratase
YP_004110497.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr7269 putative acyl-CoA dehydrogenase
YP_004110498.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr7270 acyl-CoA dehydrogenase
YP_004110499.1	KEGG: mag:amb1245 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase and ligase
YP_004110500.1	PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: ddf:DEFDS_0925 2-oxoglutarate ferredoxin oxidoreductase subunit gamma
YP_004110501.1	PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dap:Dacet_2341 thiamine pyrophosphate protein domain protein TPP-binding protein
YP_004110502.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: pth:PTH_0847 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
YP_004110503.1	KEGG: swo:Swol_1195 indolepyruvate oxidoreductase subunit beta; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain
YP_004110504.1	KEGG: bja:blr3164 hypothetical protein
YP_004110505.1	PFAM: Mammalian cell entry related domain protein; KEGG: bja:bll5892 hypothetical protein
YP_004110506.1	KEGG: bra:BRADO5085 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110507.1	PFAM: protein of unknown function DUF140; KEGG: nha:Nham_1315 hypothetical protein
YP_004110508.1	PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: nha:Nham_1314 mandelate racemase/muconate lactonizing enzyme
YP_004110509.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll5896 putative 3-phenylpropionic acid transporter
YP_004110510.1	KEGG: bra:BRADO5089 hypothetical protein
YP_004110511.1	PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bra:BRADO5091 putative threonine dehydratase
YP_004110512.1	PFAM: glycosyl transferase group 1; KEGG: oca:OCAR_5346 glycosyl transferase, group 1
YP_004110513.1	PFAM: metallophosphoesterase; KEGG: nha:Nham_1311 metallophosphoesterase
YP_004110514.1	KEGG: oca:OCAR_5344 phosphatidylethanolamine N-methyltransferase; PFAM: Methyltransferase type 11
YP_004110515.1	TIGRFAM: phosphomethylpyrimidine kinase; KEGG: bja:bll5905 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_004110516.1	PFAM: Transcription regulator AsnC-type-like; KEGG: nha:Nham_1309 AsnC family transcriptional regulator
YP_004110517.1	KEGG: bbt:BBta_5605 diheme cytochrome c-type
YP_004110518.1	PFAM: cytochrome c class II; KEGG: bbt:BBta_5606 cytochrome c, class II
YP_004110519.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bra:BRADO5140 putative aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein
YP_004110520.1	KEGG: nha:Nham_2128 hypothetical protein
YP_004110521.1	PFAM: Carbamoyltransferase; KEGG: nha:Nham_2127 carbamoyltransferase
YP_004110522.1	KEGG: bbt:BBta_5611 putative virulence factor MviN-like protein; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein
YP_004110523.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bbt:BBta_5614 putative aminotransferase
YP_004110524.1	PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bja:bll5918 putative dehydrogenase
YP_004110525.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: bja:bll5920 UDP-glucuronic acid epimerase
YP_004110526.1	KEGG: bja:blr5921 hypothetical protein
YP_004110527.1	PFAM: Glycosyl transferase, family 4, conserved region; KEGG: bbt:BBta_5665 putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase
YP_004110528.1	PFAM: polysaccharide biosynthesis protein CapD; KEGG: bja:bll5925 putative capsular polysaccharide biosynthesis protein
YP_004110529.1	KEGG: bbt:BBta_5668 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase
YP_004110530.1	KEGG: bja:bll5928 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004110531.1	KEGG: bra:BRADO5203 ADP-heptose--LPS heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9
YP_004110532.1	PFAM: sugar isomerase (SIS); KEGG: bbt:BBta_5671 phosphoheptose isomerase
YP_004110533.1	KEGG: oca:OCAR_5331 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004110534.1	KEGG: nha:Nham_1294 lipopolysaccharide heptosyltransferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9
YP_004110535.1	KEGG: bja:blr5931 UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004110536.1	KEGG: nha:Nham_1292 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_004110537.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bja:blr5933 hypothetical protein
YP_004110539.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: nha:Nham_2798 NAD-dependent epimerase/dehydratase
YP_004110540.1	KEGG: nwi:Nwi_0909 putative DNA helicase
YP_004110541.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dar:Daro_2825 PAS:GGDEF; SMART: GGDEF domain containing protein
YP_004110542.1	KEGG: bbt:BBta_4919 putative DEAD-box cold-shock protein, ATP-independent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein
YP_004110543.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll2940 acyl-CoA dehydrogenase
YP_004110544.1	KEGG: mes:Meso_0938 hypothetical protein
YP_004110545.1	PFAM: Secreted repeat of unknown function; KEGG: oca:OCAR_6987 secreted repeat protein
YP_004110546.1	KEGG: mea:Mex_1p1232 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein
YP_004110547.1	KEGG: mch:Mchl_5734 putative transmembrane anti-sigma factor
YP_004110548.1	PFAM: ABC-3 protein; KEGG: spe:Spro_2130 ABC-3 protein
YP_004110549.1	PFAM: ABC-3 protein; KEGG: rhi:NGR_c31040 putative iron transmembrane ABC transporter component
YP_004110550.1	KEGG: spe:Spro_2132 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110551.1	PFAM: periplasmic solute binding protein; KEGG: hit:NTHI0481 putative periplasmic chelated iron binding protein
YP_004110552.1	KEGG: bra:BRADO1425 putative signal peptide
YP_004110553.1	KEGG: bbt:BBta_1555 manganese transport regulator MntR; PFAM: iron dependent repressor; SMART: iron dependent repressor
YP_004110554.1	KEGG: bbt:BBta_7669 hypothetical protein
YP_004110555.1	KEGG: xau:Xaut_0925 hypothetical protein
YP_004110556.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0510 LysR family transcriptional regulator
YP_004110557.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: bja:blr7299 hypothetical protein
YP_004110558.1	KEGG: rhi:NGR_b02650 hypothetical protein
YP_004110559.1	TIGRFAM: adenosylhomocysteinase; KEGG: oca:OCAR_5321 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding
YP_004110560.1	TIGRFAM: S-adenosylmethionine synthetase; KEGG: bbt:BBta_5699 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase
YP_004110561.1	manually curated; KEGG: bra:BRADO5240 hypothetical protein
YP_004110562.1	TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bja:bll8129 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase
YP_004110563.1	PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_0893 extracellular ligand-binding receptor
YP_004110564.1	PFAM: inner-membrane translocator; KEGG: xau:Xaut_0892 inner-membrane translocator
YP_004110565.1	PFAM: inner-membrane translocator; KEGG: xau:Xaut_0891 inner-membrane translocator
YP_004110566.1	KEGG: xau:Xaut_0890 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110567.1	KEGG: xau:Xaut_0889 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110568.1	PFAM: Methionine synthase vitamin-B12 independent; KEGG: bbt:BBta_5702 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
YP_004110569.1	KEGG: bja:bll5949 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110570.1	KEGG: bja:bll5950 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110571.1	PFAM: inner-membrane translocator; KEGG: bja:bll5951 ABC transporter permease protein
YP_004110572.1	PFAM: inner-membrane translocator; KEGG: bra:BRADO5253 putative high-affinity branched-chain amino acid transport system permease protein
YP_004110573.1	PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO5254 branched chain amino acid ABC transporter
YP_004110574.1	KEGG: bja:blr5954 hypothetical protein
YP_004110575.1	KEGG: bbt:BBta_5709 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein
YP_004110576.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: bbt:BBta_5710 putative uroporphyrinogen-III synthase
YP_004110577.1	KEGG: met:M446_3169 ABC transporter, periplasmic branched chain amino acid binding protein
YP_004110578.1	PFAM: inner-membrane translocator; KEGG: mno:Mnod_0225 inner-membrane translocator
YP_004110579.1	PFAM: inner-membrane translocator; KEGG: mno:Mnod_0224 inner-membrane translocator
YP_004110580.1	KEGG: rpi:Rpic_1451 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110581.1	KEGG: mno:Mnod_0222 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110582.1	KEGG: bja:bll4578 transcriptional regulatory protein; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR
YP_004110583.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: pna:Pnap_2188 carboxymuconolactone decarboxylase
YP_004110584.1	KEGG: bra:BRADO7117 hypothetical protein
YP_004110585.1	KEGG: rer:RER_10020 hypothetical protein
YP_004110586.1	KEGG: bja:blr5962 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110587.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr5963 putative long-chain-fatty-acid--CoA ligase
YP_004110588.1	PFAM: inner-membrane translocator; KEGG: bja:blr5964 ABC transporter permease protein
YP_004110589.1	PFAM: inner-membrane translocator; KEGG: bja:blr5965 ABC transporter permease protein
YP_004110590.1	KEGG: bja:blr5966 ABC transporter substrate-binding protein
YP_004110591.1	KEGG: bja:blr5967 ABC transporter substrate-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110592.1	PFAM: glycosyl transferase group 1; KEGG: ara:Arad_4831 mannosyltransferase B
YP_004110593.1	KEGG: ara:Arad_4835 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase
YP_004110594.1	PFAM: glycosyl transferase group 1; KEGG: nha:Nham_2777 glycosyl transferase, group 1
YP_004110595.1	PFAM: ABC-2 type transporter; KEGG: epy:EpC_14020 O-antigen ABC transporter permease
YP_004110596.1	KEGG: eta:ETA_13390 O-antigen ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110597.1	PFAM: glycosyl transferase group 1; KEGG: glycosyl transferase group 1
YP_004110598.1	TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ara:Arad_4847 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004110599.1	KEGG: ara:Arad_4846 hypothetical protein
YP_004110600.1	KEGG: ara:Arad_4843 hypothetical protein
YP_004110601.1	PFAM: glycosyl transferase group 1; KEGG: ara:Arad_4842 glycosyl transferase protein
YP_004110602.1	TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: ara:Arad_4838 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase
YP_004110603.1	KEGG: ara:Arad_4837 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004110604.1	PFAM: glycosyl transferase group 1; KEGG: ara:Arad_4841 glycosyltransferase protein
YP_004110605.1	KEGG: ddc:Dd586_0661 glycosyl transferase group 1
YP_004110606.1	PFAM: glycosyl transferase group 1; KEGG: ddc:Dd586_0663 glycosyl transferase group 1
YP_004110607.1	PFAM: glycosyl transferase group 1; KEGG: ddc:Dd586_0662 glycosyl transferase group 1
YP_004110608.1	KEGG: hypothetical protein
YP_004110609.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: swi:Swit_4018 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related
YP_004110610.1	KEGG: met:M446_5189 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004110611.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: gox:GOX1611 GDP-6-deoxy-D-lyxo-4-hexulose reductase
YP_004110612.1	TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase
YP_004110613.1	KEGG: bra:BRADO0757 putative phosphomannomutase/phosphoglucomutase (PMM / PGM); PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase
YP_004110614.1	KEGG: ago:AGOS_AFR093W AFR093Wp
YP_004110615.1	KEGG: bbt:BBta_1854 hypothetical protein
YP_004110616.1	TIGRFAM: methionine-R-sulfoxide reductase; KEGG: nha:Nham_1128 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B
YP_004110617.1	TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bja:blr7043 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A
YP_004110618.1	KEGG: oca:OCAR_5131 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein
YP_004110619.1	KEGG: bra:BRADO1324 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein
YP_004110620.1	PFAM: DoxX family protein; KEGG: bbt:BBta_6801 hypothetical protein
YP_004110621.1	KEGG: nwi:Nwi_2452 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type
YP_004110622.1	KEGG: bja:blr7381 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004110623.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bra:BRADO1320 LysR family transcriptional regulator
YP_004110624.1	KEGG: nwi:Nwi_2455 cobyrinic acid a,c-diamide synthase
YP_004110625.1	KEGG: nwi:Nwi_2456 hypothetical protein
YP_004110626.1	KEGG: bja:bll7386 hypothetical protein
YP_004110627.1	KEGG: bja:bll7395 hypothetical protein; TIGRFAM: phasin; PFAM: Phasin
YP_004110628.1	KEGG: oca:OCAR_5121 phasin 2; TIGRFAM: phasin; PFAM: Phasin
YP_004110629.1	TIGRFAM: PAS sensor protein; PFAM: histidine kinase A domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; KEGG: bja:blr7396 two-component hybrid sensor and regulator; SMART: histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein
YP_004110630.1	PFAM: Rv0623 family protein transcription factor; KEGG: gvi:gsr3224 hypothetical protein
YP_004110631.1	PFAM: PilT protein domain protein; KEGG: mva:Mvan_1171 PilT domain-containing protein
YP_004110632.1	KEGG: bja:blr7084 transcriptional regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp
YP_004110633.1	KEGG: bja:bsl7085 hypothetical protein
YP_004110634.1	TIGRFAM: nitrite reductase, copper-containing; KEGG: bbt:BBta_6826 copper-containing nitrite reductase (NO-forming) NirK; PFAM: multicopper oxidase type 1; multicopper oxidase type 3
YP_004110635.1	PFAM: protein of unknown function DUF323; KEGG: bja:blr7090 periplasmic nitrate reductase
YP_004110636.1	TIGRFAM: thymidine phosphorylase; KEGG: bja:bll3117 thymidine phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase domain; glycosyl transferase family 3
YP_004110637.1	TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: nha:Nham_1899 phosphoribosylpyrophosphate synthetase; PFAM: phosphoribosyltransferase
YP_004110638.1	PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: bja:bll3115 hypothetical protein
YP_004110639.1	KEGG: pen:PSEEN5412 hypothetical protein
YP_004110640.1	PFAM: extracellular solute-binding protein family 1; KEGG: oca:OCAR_5119 extracellular solute-binding protein, family 1
YP_004110641.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oca:OCAR_5118 ferric iron uptake ABC transporter (FeT) family, permease protein
YP_004110642.1	KEGG: nha:Nham_1248 hypothetical protein
YP_004110643.1	KEGG: atc:AGR_C_4537 hypothetical protein; TIGRFAM: pyrimidine utilization protein D; PFAM: alpha/beta hydrolase fold
YP_004110644.1	KEGG: azc:AZC_2497 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110645.1	PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_2496 hydrolase
YP_004110646.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2495 ABC transporter permease protein
YP_004110647.1	KEGG: mrd:Mrad2831_1582 endoribonuclease L-PSP; TIGRFAM: pyrimidine utilization protein C; PFAM: Endoribonuclease L-PSP
YP_004110648.1	PFAM: isochorismatase hydrolase; KEGG: ecg:E2348C_1062 predicted enzyme
YP_004110649.1	KEGG: azc:AZC_2492 putative ABC-type nitrate/sulfonate/bicarbonate transport
YP_004110650.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mrd:Mrad2831_4382 LysR family transcriptional regulator
YP_004110651.1	SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: avn:Avin_08270 ATP-dependent metallopeptidase M41, FtsH; PFAM: peptidase M41; AAA ATPase central domain protein
YP_004110652.1	TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: bra:BRADO1224 acetyl-CoA:acetoacetyl-CoA transferase, beta subunit; PFAM: coenzyme A transferase
YP_004110653.1	TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: bbt:BBta_6830 acetyl-CoA/acetoacetyl-CoA transferase, alpha subunit; PFAM: coenzyme A transferase
YP_004110654.1	PFAM: AsmA family protein; KEGG: nha:Nham_1245 AsmA
YP_004110655.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7103 ABC transporter permease protein
YP_004110656.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7104 ABC transporter permease protein
YP_004110657.1	TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; KEGG: bbt:BBta_6838 putrescine ABC transporter ATP-binding protein; SMART: AAA ATPase
YP_004110658.1	PFAM: regulatory protein IclR; KEGG: xau:Xaut_1568 transcriptional regulator, TrmB
YP_004110659.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mka:MK0602 nitrate/sulfonate/bicarbonate ABC transporter permease
YP_004110660.1	KEGG: ckr:CKR_0943 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110661.1	KEGG: mrd:Mrad2831_6160 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein
YP_004110662.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: mms:mma_2479 hypothetical protein
YP_004110663.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sfu:Sfum_2312 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004110664.1	TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bra:BRADO1213 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein
YP_004110665.1	PFAM: FAD dependent oxidoreductase; KEGG: bra:BRADO1212 NAD binding site:FAD dependent oxidoreductase
YP_004110666.1	KEGG: bja:bsl7109 hypothetical protein
YP_004110667.1	PFAM: protein of unknown function DUF465; KEGG: nwi:Nwi_1003 hypothetical protein
YP_004110668.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nha:Nham_1237 diguanylate cyclase; SMART: GGDEF domain containing protein
YP_004110669.1	TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: bbt:BBta_6848 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_004110670.1	TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: bbt:BBta_6849 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp
YP_004110671.1	KEGG: oca:OCAR_5101 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21
YP_004110672.1	KEGG: bja:bll7119 hypothetical protein
YP_004110673.1	PFAM: Cupin 2 conserved barrel domain protein; KEGG: bja:bsl7120 hypothetical protein
YP_004110674.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbt:BBta_3517 hypothetical protein
YP_004110675.1	KEGG: bja:bll7124 NAD(P)+ transhydrogenase beta chain; PFAM: NAD(P) transhydrogenase beta subunit
YP_004110676.1	KEGG: oca:OCAR_5095 NAD(P) transhydrogenase subunit alpha
YP_004110677.1	KEGG: bja:bll7126 NAD(P)+ transhydrogenase; PFAM: alanine dehydrogenase/PNT domain protein
YP_004110678.1	PFAM: aa3 type cytochrome c oxidase subunit IV; KEGG: bja:bsl7127 hypothetical protein
YP_004110679.1	KEGG: bbt:BBta_6860 putative death on curing protein; TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic
YP_004110680.1	TIGRFAM: addiction module antidote; KEGG: bbt:BBta_6861 transcriptional regulator/antitoxin, MazE
YP_004110681.1	KEGG: bbt:BBta_6862 putative oligoendopeptidase F; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F
YP_004110682.1	PFAM: Integral membrane protein TerC; KEGG: azl:AZL_d01240 TerC-like integral membrane protein
YP_004110683.1	KEGG: nha:Nham_1224 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase
YP_004110684.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: bja:blr7131 hypothetical protein
YP_004110685.1	PFAM: protein of unknown function DUF882; KEGG: nha:Nham_1222 hypothetical protein
YP_004110686.1	PFAM: Protein of unknown function DUF2312; KEGG: nha:Nham_1221 hypothetical protein
YP_004110687.1	PFAM: protein of unknown function DUF1244; KEGG: bja:bll7136 hypothetical protein
YP_004110688.1	PFAM: protein of unknown function DUF1036; KEGG: bra:BRADO1186 putative signal peptide
YP_004110689.1	TIGRFAM: pyruvate kinase; KEGG: bra:BRADO1185 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta
YP_004110690.1	PFAM: protein of unknown function UPF0150; KEGG: bgr:Bgr_03670 putative transcriptional regulator
YP_004110693.1	TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: azc:AZC_1807 OsmC-like protein; PFAM: OsmC family protein
YP_004110694.1	PFAM: TPR repeat-containing protein; KEGG: bbt:BBta_1657 hypothetical protein
YP_004110695.1	TIGRFAM: ribosomal protein L36; KEGG: nha:Nham_1214 50S ribosomal protein L36
YP_004110696.1	PFAM: amidohydrolase 2; KEGG: bja:blr7549 hypothetical protein
YP_004110697.1	TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: bbt:BBta_1654 2-haloacid dehalogenase; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004110698.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bbt:BBta_1653 putative YbaK-like protein
YP_004110699.1	PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pde:Pden_3538 TRAP dicarboxylate family transporter DctQ subunit
YP_004110700.1	KEGG: bpt:Bpet1218 TrapT family protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004110701.1	PFAM: Extracellular solute-binding protein, family 7; KEGG: bpt:Bpet1219 hypothetical protein
YP_004110702.1	KEGG: bja:bsl2782 hypothetical protein
YP_004110703.1	KEGG: azl:AZL_007500 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004110704.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: azl:AZL_007490 chemotaxis sensory transducer; SMART: PAS domain containing protein
YP_004110705.1	KEGG: bfo:BRAFLDRAFT_126631 hypothetical protein
YP_004110706.1	PFAM: virulence factor MVIN family protein; polysaccharide biosynthesis protein; KEGG: nha:Nham_3553 polysaccharide biosynthesis protein
YP_004110707.1	KEGG: nha:Nham_3554 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR
YP_004110708.1	PFAM: Patatin; KEGG: nha:Nham_3555 patatin
YP_004110709.1	PFAM: SCP-like extracellular; KEGG: bja:blr1486 hypothetical protein
YP_004110710.1	KEGG: met:M446_4572 glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp
YP_004110711.1	KEGG: bja:bsl4167 putative glutamine synthetase translation inhibitor
YP_004110712.1	TIGRFAM: Glutaminase, core; KEGG: mno:Mnod_4504 glutaminase, core; PFAM: Glutaminase, core
YP_004110713.1	PFAM: conserved hypothetical protein; KEGG: bra:BRADO1068 hypothetical protein
YP_004110714.1	PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: bja:blr1479 ferredoxin-nitrite reductase
YP_004110715.1	KEGG: bra:BRADO1066 hypothetical protein
YP_004110716.1	KEGG: bbt:BBta_6982 uroporphyrinogen-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain
YP_004110717.1	KEGG: oan:Oant_1854 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1
YP_004110718.1	KEGG: azc:AZC_3733 sulfate ABC transporter permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004110719.1	KEGG: azc:AZC_3734 sulfate ABC transporter permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004110720.1	TIGRFAM: malate synthase G; KEGG: bra:BRADO1059 malate synthase G; PFAM: Malate synthase family protein
YP_004110721.1	PFAM: CsbD family protein; KEGG: ret:RHE_CH01802 hypothetical protein
YP_004110722.1	KEGG: bja:bsr1472 hypothetical protein
YP_004110723.1	KEGG: bra:BRADO1056 putative signal peptide
YP_004110724.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr1468 hypothetical protein
YP_004110725.1	PFAM: protein of unknown function UPF0118; KEGG: bja:bll1467 hypothetical protein
YP_004110726.1	KEGG: bja:bll7790 hypothetical protein
YP_004110727.1	KEGG: bja:bll7795 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004110728.1	KEGG: bra:BRADO1048 hypothetical protein
YP_004110729.1	KEGG: bja:blr7797 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004110730.1	PFAM: HWE histidine kinase; KEGG: bbt:BBta_7004 signal transduction histidine kinase
YP_004110731.1	KEGG: bra:BRADO1045 urease accessory protein UreG; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K
YP_004110732.1	KEGG: pvx:PVX_097685 merozoite surface protein 3 (MSP3)
YP_004110733.1	KEGG: oca:OCAR_5016 hypothetical protein
YP_004110734.1	KEGG: bbt:BBta_5740 putative dimethyl sulfoxide reductase(DMSO reductase); PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region
YP_004110735.1	manually curated; KEGG: bja:blr7579 hypothetical protein
YP_004110736.1	KEGG: bja:bll6061 transcriptional regulatory protein; PFAM: regulatory protein Crp; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp
YP_004110737.1	KEGG: bra:BRADO5301 putative cytochrome c
YP_004110738.1	PFAM: Mammalian cell entry related domain protein; protein of unknown function DUF330; KEGG: nha:Nham_1923 hypothetical protein
YP_004110739.1	KEGG: bja:bll6064 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110740.1	PFAM: protein of unknown function DUF140; KEGG: nha:Nham_1921 hypothetical protein
YP_004110741.1	KEGG: nha:Nham_1920 hypothetical protein
YP_004110742.1	KEGG: gsu:GSU1300 methyl-accepting chemotaxis protein
YP_004110743.1	PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: bja:bll6068 hypothetical protein
YP_004110744.1	KEGG: bra:BRADO2437 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein
YP_004110745.1	KEGG: nha:Nham_1915 hypothetical protein
YP_004110746.1	PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: bja:bll6073 poly-beta-hydroxybutyrate polymerase
YP_004110747.1	PFAM: UspA domain protein; KEGG: nha:Nham_1913 hypothetical protein
YP_004110748.1	PFAM: UspA domain protein; KEGG: bja:bll2590 hypothetical protein
YP_004110749.1	KEGG: bra:BRADO5312 hypothetical protein; PFAM: CBS domain containing protein; transport-associated; SMART: CBS domain containing protein
YP_004110750.1	TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: oca:OCAR_7132 sensor protein FixL; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein
YP_004110751.1	KEGG: bra:BRADO2434 response regulator FixJ; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR
YP_004110752.1	KEGG: bja:bll2758 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004110753.1	KEGG: bja:bll2757 transcriptional regulator FixK; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding
YP_004110754.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: avi:Avi_5163 O-acetylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_004110755.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rsh:Rsph17029_1748 NADH dehydrogenase (quinone)
YP_004110756.1	KEGG: rsq:Rsph17025_1700 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_004110757.1	KEGG: rsq:Rsph17025_1699 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein
YP_004110758.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rsk:RSKD131_1426 NADH-ubiquinone oxidoreductase, chain 4L precursor
YP_004110759.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: rsp:RSP_0108 NADH dehydrogenase I chain J
YP_004110760.1	TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: eca:ECA3021 NADH dehydrogenase subunit I
YP_004110761.1	PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rsp:RSP_0106 putative NADH dehydrogenase I chain H
YP_004110762.1	KEGG: rsq:Rsph17025_1694 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase
YP_004110763.1	KEGG: rsh:Rsph17029_1740 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding
YP_004110764.1	PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rsq:Rsph17025_1692 NADH dehydrogenase subunit E
YP_004110765.1	KEGG: rsk:RSKD131_1418 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit
YP_004110766.1	TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: rsq:Rsph17025_1690 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit
YP_004110767.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: pap:PSPA7_2570 NADH dehydrogenase subunit A
YP_004110768.1	KEGG: nha:Nham_3736 cyclic beta-1,2-glucan ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase
YP_004110769.1	KEGG: bja:bll1320 penicillin-binding protein; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
YP_004110770.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO6584 acyl-CoA synthetase
YP_004110771.1	PFAM: Redoxin domain protein; KEGG: bja:bll1317 peroxiredoxin
YP_004110772.1	KEGG: bja:blr1316 ribonuclease H; PFAM: ribonuclease H
YP_004110773.1	TIGRFAM: homoserine kinase; KEGG: bja:blr1315 homoserine kinase; PFAM: aminoglycoside phosphotransferase
YP_004110774.1	TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: nha:Nham_3745 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein
YP_004110775.1	PFAM: protein of unknown function DUF1013; KEGG: nha:Nham_3746 hypothetical protein
YP_004110776.1	KEGG: dpe:Dper_GL17156 GL17156 gene product from transcript GL17156-RA
YP_004110777.1	PFAM: ATP-binding region ATPase domain protein; KEGG: mma:MM_2421 chaperone protein
YP_004110778.1	TIGRFAM: prevent-host-death family protein; KEGG: msl:Msil_1401 prevent-host-death family protein
YP_004110779.1	PFAM: PilT protein domain protein; KEGG: msl:Msil_1400 PilT protein domain protein
YP_004110780.1	manually curated; KEGG: bpf:BpOF4_00490 hypothetical protein
YP_004110781.1	PFAM: BLUF domain protein; KEGG: mch:Mchl_4401 BLUF domain protein
YP_004110782.1	PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: msl:Msil_3204 transcriptional regulator, LysR family
YP_004110783.1	PFAM: YceI family protein; KEGG: mrd:Mrad2831_5253 YceI family protein
YP_004110784.1	PFAM: nitroreductase; KEGG: cvi:CV_1813 hypothetical protein
YP_004110785.1	PFAM: Methyltransferase type 11; KEGG: lch:Lcho_1387 methyltransferase type 11
YP_004110786.1	KEGG: psb:Psyr_0778 type III effector HopAG1
YP_004110787.1	KEGG: alv:Alvin_0881 dual specificity protein phosphatase
YP_004110788.1	PFAM: Phosphate-starvation-inducible E-like; KEGG: apb:SAR116_0955 phosphate-starvation-inducible E
YP_004110789.1	PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_3081 light harvesting protein B-800-850
YP_004110790.1	PFAM: antenna complex alpha/beta subunit; KEGG: pucA; light-harvesting protein B-800/850 subunit alpha
YP_004110791.1	KEGG: nha:Nham_1125 hypothetical protein
YP_004110792.1	KEGG: bbt:BBta_1851 hypothetical protein
YP_004110793.1	SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: bja:bll7052 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase
YP_004110794.1	PFAM: type IV pilus assembly PilZ; KEGG: nwi:Nwi_0398 hypothetical protein
YP_004110795.1	PFAM: aldo/keto reductase; KEGG: bbt:BBta_2445 2,5-diketo-D-gluconate reductase B
YP_004110796.1	KEGG: nha:Nham_1120 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region
YP_004110797.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr7055 transport protein
YP_004110798.1	KEGG: bja:bll7059 hypothetical protein
YP_004110799.1	PFAM: protein of unknown function DUF6 transmembrane; KEGG: bra:BRADO5941 DMT family permease
YP_004110800.1	PFAM: histidine kinase HAMP region domain protein; KEGG: nha:Nham_1080 methyl-accepting chemotaxis sensory transducer
YP_004110801.1	KEGG: bja:blr2932 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004110802.1	PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: bbt:BBta_7128 hypothetical protein
YP_004110803.1	KEGG: bra:BRADO5942 putative signal peptide
YP_004110804.1	KEGG: bja:blr7338 hypothetical protein
YP_004110805.1	KEGG: bra:BRADO5943 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004110806.1	KEGG: bja:bll7062 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004110807.1	KEGG: nha:Nham_1119 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein
YP_004110808.1	KEGG: oca:OCAR_7158 phosphoserine aminotransferase; TIGRFAM: phosphoserine aminotransferase
YP_004110809.1	KEGG: bja:blr2976 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004110810.1	KEGG: bja:blr2975 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein
YP_004110811.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_1821 hypothetical protein
YP_004110812.1	PFAM: Glutathione S-transferase domain; KEGG: bja:bll7404 glutathione S-transferase-like protein
YP_004110813.1	TIGRFAM: outer membrane insertion C-terminal signal; KEGG: oca:OCAR_7161 hypothetical protein
YP_004110814.1	PFAM: porin; KEGG: bra:BRADO5955 putative outer surface protein (OmpA-like); putative heat-resistant agglutinin 1
YP_004110815.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll7407 fosmidomycin resistance protein
YP_004110816.1	KEGG: bbt:BBta_1817 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase
YP_004110817.1	KEGG: nha:Nham_1113 hypothetical protein
YP_004110818.1	KEGG: bja:blr7409 L-lactate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase
YP_004110819.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr2952 enoyl-CoA hydratase
YP_004110820.1	PFAM: protein of unknown function UPF0126; KEGG: mdi:METDI4469 hypothetical protein
YP_004110821.1	KEGG: nha:Nham_1109 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase
YP_004110822.1	PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: nha:Nham_1108 sulphate transporter
YP_004110823.1	PFAM: helix-turn-helix domain protein; KEGG: mno:Mnod_1557 transcriptional regulator, XRE family
YP_004110824.1	KEGG: bra:BRADO5970 elongation factor G; TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein
YP_004110825.1	PFAM: protein of unknown function DUF992; KEGG: bja:bll7415 hypothetical protein
YP_004110826.1	PFAM: protein of unknown function DUF992; KEGG: nha:Nham_1104 hypothetical protein
YP_004110827.1	PFAM: aminotransferase class I and II; KEGG: nha:Nham_1103 aspartate aminotransferase
YP_004110828.1	PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO5975 putative glutathione S-transferase (GST); putative maleylacetoacetate isomerase
YP_004110829.1	KEGG: hoh:Hoch_6606 HtrA2 peptidase
YP_004110830.1	KEGG: nwi:Nwi_2982 hypothetical protein
YP_004110831.1	KEGG: oca:OCAR_7178 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase
YP_004110832.1	PFAM: DnaB domain protein helicase domain protein; KEGG: bja:blr5258 replicative DNA helicase
YP_004110833.1	PFAM: aldo/keto reductase; KEGG: bja:blr7422 oxidoreductase
YP_004110834.1	manually curated; KEGG: nwi:Nwi_2494 hypothetical protein
YP_004110835.1	KEGG: bbt:BBta_1791 putative haloacid dehalogenase/epoxide hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004110836.1	PFAM: regulatory protein TetR; KEGG: bbt:BBta_1790 TetR family transcriptional regulator
YP_004110837.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sme:SMc01669 enoyl-CoA hydratase
YP_004110838.1	PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO5989 putative glutathione S-transferase (GST)
YP_004110839.1	KEGG: rme:Rmet_2149 beta-lactamase-like protein
YP_004110840.1	KEGG: oca:OCAR_7182 hypothetical protein
YP_004110841.1	TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: nha:Nham_2923 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein
YP_004110842.1	PFAM: MT-A70 family protein; KEGG: mca:MCA0246 adenine-specific DNA methyltransferase
YP_004110843.1	KEGG: ret:RHE_CH03388 exopolysaccharide biosynthesis protein
YP_004110844.1	PFAM: PilT protein domain protein; KEGG: atc:AGR_L_3577 hypothetical protein
YP_004110845.1	KEGG: vvy:VVP32 hypothetical protein
YP_004110846.1	KEGG: nha:Nham_2927 hypothetical protein
YP_004110847.1	TIGRFAM: acetyl-CoA acetyltransferase; KEGG: swi:Swit_1771 acetyl-CoA acetyltransferase; PFAM: Thiolase-like
YP_004110848.1	KEGG: nha:Nham_2926 hypothetical protein
YP_004110849.1	KEGG: bja:blr7434 hypothetical protein
YP_004110850.1	KEGG: nha:Nham_2929 hypothetical protein
YP_004110851.1	KEGG: bra:BRADO6012 putative signal peptide
YP_004110852.1	PFAM: MaoC domain protein dehydratase; KEGG: nha:Nham_3098 MaoC-like dehydratase
YP_004110853.1	PFAM: MaoC domain protein dehydratase; KEGG: bra:BRADO6010 hypothetical protein
YP_004110854.1	KEGG: nha:Nham_3100 hypothetical protein
YP_004110855.1	KEGG: oca:OCAR_7188 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related
YP_004110856.1	TIGRFAM: peptidyl-tRNA hydrolase; KEGG: oca:OCAR_7189 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase
YP_004110857.1	KEGG: bja:bll7441 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like
YP_004110858.1	PFAM: protein of unknown function DUF526; KEGG: bra:BRADO6005 hypothetical protein
YP_004110859.1	KEGG: nha:Nham_3095 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase
YP_004110860.1	PFAM: protein of unknown function DUF185; KEGG: bra:BRADO6003 hypothetical protein
YP_004110861.1	PFAM: protein of unknown function DUF152; KEGG: bra:BRADO6002 hypothetical protein
YP_004110862.1	KEGG: nha:Nham_3092 hypothetical protein
YP_004110863.1	TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: nwi:Nwi_2501 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase
YP_004110864.1	PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: bra:BRADO6033 riboflavin synthase subunit beta
YP_004110865.1	PFAM: Protein of unknown function DUF1790; KEGG: nwi:Nwi_2513 hypothetical protein
YP_004110866.1	TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: nha:Nham_3106 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent
YP_004110867.1	KEGG: bja:blr7462 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004110868.1	KEGG: nha:Nham_3137 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004110869.1	KEGG: bbt:BBta_1738 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004110870.1	TIGRFAM: branched-chain amino acid aminotransferase; KEGG: nha:Nham_3139 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV
YP_004110871.1	KEGG: bja:blr7493 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein
YP_004110872.1	PFAM: Class I peptide chain release factor; KEGG: bja:blr7486 peptidyl-tRNA hydrolase domain protein
YP_004110873.1	PFAM: Chromogranin/secretogranin; peptidase M16 domain protein; KEGG: bra:BRADO6071 putative Zn-dependent protease
YP_004110874.1	PFAM: peptidase M16 domain protein; KEGG: bja:blr7484 zinc protease
YP_004110875.1	KEGG: bbt:BBta_1714 hypothetical protein
YP_004110876.1	KEGG: bja:blr7482 putative lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II
YP_004110877.1	TIGRFAM: isoleucyl-tRNA synthetase; KEGG: nha:Nham_3162 isoleucyl-tRNA synthetase
YP_004110878.1	KEGG: aav:Aave_2849 putative acetyltransferase
YP_004110879.1	KEGG: bja:blr7480 riboflavin biosynthesis bifunctional protein; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase
YP_004110880.1	PFAM: ribonuclease T2; KEGG: nha:Nham_3150 ribonuclease T2
YP_004110881.1	KEGG: bbt:BBta_1733 hypothetical protein
YP_004110882.1	KEGG: nha:Nham_3152 hypothetical protein
YP_004110883.1	KEGG: bra:BRADO6048 putative signal peptide
YP_004110884.1	KEGG: bbt:BBta_2267 hypothetical protein
YP_004110885.1	PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_3257 TonB-dependent receptor, plug
YP_004110886.1	PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_3258 GCN5-related N-acetyltransferase
YP_004110887.1	PFAM: MscS Mechanosensitive ion channel; KEGG: MscS mechanosensitive ion channel
YP_004110888.1	PFAM: NUDIX hydrolase; KEGG: nha:Nham_3259 NUDIX hydrolase
YP_004110889.1	PFAM: metallophosphoesterase; KEGG: bja:bll2457 hypothetical protein
YP_004110890.1	manually curated; KEGG: nha:Nham_1099 hypothetical protein
YP_004110891.1	KEGG: nha:Nham_1098 hypothetical protein
YP_004110892.1	PFAM: isocitrate lyase and phosphorylmutase; KEGG: bja:blr2455 isocitrate lyase
YP_004110893.1	KEGG: nha:Nham_1096 XRE family transcriptional regulator; PFAM: Protein of unknown function DUF2083,transcriptional regulator; protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein
YP_004110894.1	KEGG: bbt:BBta_4922 hypothetical protein
YP_004110895.1	KEGG: nha:Nham_1092 lytic murein transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein
YP_004110896.1	PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO0500 putative branched-chain amino-acid ABC transporter, periplasmic binding protein
YP_004110897.1	KEGG: bbt:BBta_7683 putative branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110898.1	KEGG: bja:bll0885 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004110900.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_7685 putative branched-chain amino acid ABC transporter, permease protein
YP_004110901.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_7686 putative branched-chain amino acid ABC transporter, permease protein
YP_004110902.1	KEGG: sen:SACE_5236 sodium/hydrogen exchanger
YP_004110903.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bbt:BBta_2240 N-ethylmaleimide reductase, FMN-linked
YP_004110904.1	PFAM: Protein of unknown function DUF2160, transmembrane; KEGG: bra:BRADO1913 hypothetical protein
YP_004110905.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr2440 ABC transporter permease protein
YP_004110906.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2224 putative ABC transporter permease protein
YP_004110907.1	KEGG: bra:BRADO1910 putative ATP-binding protein of sugar ABC transporter; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase
YP_004110908.1	KEGG: bja:blr2437 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_004110909.1	KEGG: bra:BRADO1908 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004110910.1	KEGG: bja:blr2433 transcriptional regulatory protein; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR
YP_004110911.1	PFAM: flavin reductase domain protein FMN-binding; KEGG: bja:blr2425 hypothetical protein
YP_004110912.1	PFAM: regulatory protein TetR; KEGG: nha:Nham_1083 TetR family transcriptional regulator
YP_004110913.1	PFAM: acriflavin resistance protein; KEGG: bja:blr2423 cation efflux system protein
YP_004110914.1	KEGG: bbt:BBta_2214 putative component of multidrug efflux system; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein
YP_004110915.1	KEGG: bbt:BBta_4427 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004110916.1	PFAM: CsbD family protein; KEGG: nha:Nham_1079 CsbD-like
YP_004110917.1	TIGRFAM: gamma-glutamyltransferase; KEGG: bra:BRADO1881 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase
YP_004110918.1	PFAM: SlyX family protein; KEGG: bja:bsl2402 hypothetical protein
YP_004110919.1	PFAM: AMP-dependent synthetase and ligase; KEGG: cak:Caul_0814 AMP-dependent synthetase and ligase
YP_004110920.1	KEGG: bja:bll2244 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding
YP_004110921.1	KEGG: bra:BRADO6425 hypothetical protein
YP_004110922.1	KEGG: bja:blr7890 putative beta-lactamase
YP_004110923.1	KEGG: bja:blr7891 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase
YP_004110924.1	PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO6428 putative glutathione S-transferase
YP_004110925.1	KEGG: nha:Nham_0663 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding
YP_004110926.1	KEGG: cja:CJA_0504 glycosyl transferase, putative, gt4E
YP_004110927.1	KEGG: bja:blr1408 hypothetical protein
YP_004110928.1	PFAM: GCN5-related N-acetyltransferase; KEGG: avi:Avi_2379 acetyltransferase
YP_004110929.1	PFAM: Peptidase M23; KEGG: bbt:BBta_1196 putative metalloendopeptidase
YP_004110930.1	PFAM: NHL repeat containing protein; KEGG: bja:bll1406 hypothetical protein
YP_004110931.1	TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: bbt:BBta_1195 chaperone; SMART: AAA ATPase
YP_004110932.1	PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: nha:Nham_0680 hypothetical protein
YP_004110933.1	KEGG: oca:OCAR_4778 putative conserved hypothetical protein
YP_004110934.1	KEGG: nwi:Nwi_0586 methionine biosynthesis MetW; TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein
YP_004110935.1	TIGRFAM: homoserine O-acetyltransferase; KEGG: bbt:BBta_1186 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold
YP_004110936.1	PFAM: Chorismate mutase, type II; KEGG: bja:bll1398 hypothetical protein
YP_004110937.1	KEGG: bbt:BBta_1183 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II
YP_004110938.1	KEGG: nwi:Nwi_0582 cyclohexadienyl dehydrogenase; PFAM: Prephenate dehydrogenase
YP_004110939.1	PFAM: Mg2 transporter protein CorA family protein; KEGG: nha:Nham_0762 Mg2+ transporter protein, CorA-like
YP_004110940.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: oca:OCAR_6915 ErfK/YbiS/YcfS/YnhG
YP_004110941.1	PFAM: Extensin family protein; KEGG: nha:Nham_0760 extensin-like
YP_004110942.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO2140 putative acyl-CoA synthetase
YP_004110943.1	KEGG: nha:Nham_0755 hypothetical protein
YP_004110944.1	KEGG: dma:DMR_10690 hypothetical protein
YP_004110945.1	KEGG: rce:RC1_3901 hypothetical protein
YP_004110946.1	KEGG: pzu:PHZ_c2683 hypothetical protein
YP_004110947.1	KEGG: azl:AZL_d04490 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004110948.1	KEGG: dse:Dsec_GM24424 GM24424 gene product from transcript GM24424-RA
YP_004110949.1	KEGG: bra:BRADO2557 putative methyl-accepting chemotaxis receptor/sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004110950.1	KEGG: bja:bll5850 hypothetical protein
YP_004110951.1	KEGG: bja:bll5849 hypothetical protein
YP_004110952.1	PFAM: Pyridoxal-dependent decarboxylase; KEGG: nha:Nham_1334 pyridoxal-dependent decarboxylase
YP_004110953.1	PFAM: metallophosphoesterase; KEGG: nha:Nham_3527 hypothetical protein
YP_004110954.1	KEGG: bra:BRADO1138 antifreeze protein, type I: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase
YP_004110955.1	KEGG: bra:BRADO4648 hypothetical protein
YP_004110956.1	KEGG: aau:AAur_pTC20031 cadmium-translocating P-type ATPase
YP_004110957.1	KEGG: hoh:Hoch_3149 ATP-dependent DNA helicase, RecQ family
YP_004110958.1	KEGG: bbt:BBta_6071 putative rhodanese-related sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein
YP_004110959.1	KEGG: sme:SMc01259 hypothetical protein
YP_004110960.1	KEGG: tgr:Tgr7_3247 hypothetical protein
YP_004110961.1	KEGG: slt:Slit_1971 heavy metal efflux pump, CzcA family; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein
YP_004110962.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rcu:RCOM_0389620 Cobalt-zinc-cadmium resistance protein czcB, putative
YP_004110963.1	KEGG: bja:blr2976 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004110964.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: azl:AZL_007490 chemotaxis sensory transducer; SMART: PAS domain containing protein
YP_004110965.1	KEGG: bja:blr2976 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer
YP_004110966.1	KEGG: azl:AZL_007490 chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein
YP_004110967.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: oca:OCAR_6982 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop
YP_004110968.1	PFAM: protein of unknown function DUF721; KEGG: nha:Nham_3228 hypothetical protein
YP_004110969.1	PFAM: DSBA oxidoreductase; KEGG: bra:BRADO2001 hypothetical protein
YP_004110970.1	KEGG: xau:Xaut_0814 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein
YP_004110971.1	KEGG: pla:Plav_0387 hypothetical protein
YP_004110972.1	KEGG: bja:bll2496 chromosome segregation protein; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein
YP_004110973.1	PFAM: Ribosomal small subunit Rsm22; KEGG: nha:Nham_3231 methyltransferase type 12
YP_004110974.1	PFAM: LemA family protein; KEGG: oca:OCAR_6988 LemA
YP_004110975.1	PFAM: peptidase M48 Ste24p; KEGG: bbt:BBta_2314 putative protease HtpX
YP_004110976.1	KEGG: bja:bll2492 hypothetical protein
YP_004110977.1	KEGG: nha:Nham_3236 hypothetical protein
YP_004110978.1	KEGG: nwi:Nwi_2613 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_004110979.1	KEGG: bbt:BBta_2309 anthranilate synthase; TIGRFAM: anthranilate synthase; glutamine amidotransferase of anthranilate synthase; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; glutamine amidotransferase class-I
YP_004110980.1	PFAM: YcfA family protein; KEGG: dae:Dtox_3658 YcfA family protein
YP_004110981.1	PFAM: protein of unknown function UPF0150; KEGG: mpo:Mpop_3129 protein of unknown function UPF0150
YP_004110982.1	PFAM: Methyltransferase type 11; KEGG: rsq:Rsph17025_3983 hypothetical protein
YP_004110983.1	PFAM: ABC-1 domain protein; KEGG: ABC-1 domain-containing protein
YP_004110984.1	KEGG: bbt:BBta_1659 hypothetical protein
YP_004110985.1	PFAM: PhnA protein; KEGG: rhi:NGR_c07170 PhnA-like protein
YP_004110986.1	PFAM: OmpW family protein; KEGG: bbt:BBta_0946 putative outer membrane protein precursor of unknown function
YP_004110987.1	KEGG: bja:bsr1310 hypothetical protein
YP_004110988.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0943 putative propionate--CoA ligase
YP_004110989.1	KEGG: bbt:BBta_0942 hypothetical protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat
YP_004110990.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr1304 dehydrogenase
YP_004110991.1	KEGG: azc:AZC_3721 elongator protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_004110992.1	PFAM: Domain of unknown function DUF1850; KEGG: bja:blr1303 hypothetical protein
YP_004110993.1	KEGG: bra:BRADO6597 C4-dicarboxylate transporter; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004110994.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:blr1301 immunogenic protein precursor
YP_004110995.1	PFAM: major facilitator superfamily MFS_1; KEGG: azl:AZL_009150 major facilitator superfamily MFS-1
YP_004110996.1	KEGG: rsq:Rsph17025_3337 hypothetical protein; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004110997.1	PFAM: PAS fold-4 domain protein; HWE histidine kinase; KEGG: rsp:RSP_1628 sensor histidine protein kinase
YP_004110998.1	KEGG: rce:RC1_0246 alkaline phosphatase D
YP_004110999.1	PFAM: conserved hypothetical protein; KEGG: vei:Veis_4511 hypothetical protein
YP_004111000.1	KEGG: bja:blr0402 two-component response regulator; PFAM: EAL domain protein; response regulator receiver; SMART: EAL domain protein
YP_004111001.1	KEGG: bja:blr1300 hypothetical protein
YP_004111002.1	KEGG: bja:bll1299 hypothetical protein
YP_004111003.1	KEGG: nwi:Nwi_0278 hypothetical protein
YP_004111004.1	PFAM: NUDIX hydrolase; KEGG: bja:blr1297 hypothetical protein
YP_004111005.1	PFAM: thioesterase superfamily protein; KEGG: bja:bll1296 hypothetical protein
YP_004111006.1	KEGG: mrd:Mrad2831_3556 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_004111007.1	KEGG: bbt:BBta_3939 putative two-component response regulatory protein, response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004111008.1	KEGG: bbt:BBta_6050 putative sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_004111009.1	PFAM: protein of unknown function DUF329; KEGG: nwi:Nwi_0276 zinc-binding protein
YP_004111010.1	KEGG: bja:blr1259 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein
YP_004111011.1	KEGG: hoh:Hoch_1691 SMC domain protein
YP_004111012.1	KEGG: bra:BRADO6635 putative arsenate reductase (ArsC-like); PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight
YP_004111013.1	PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_0248 hypothetical protein
YP_004111014.1	TIGRFAM: histidinol dehydrogenase; KEGG: bja:blr1256 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase
YP_004111015.1	KEGG: bra:BRADO6638 hypothetical protein
YP_004111016.1	KEGG: nha:Nham_0285 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
YP_004111017.1	KEGG: nha:Nham_0415 hypothetical protein
YP_004111018.1	KEGG: hla:Hlac_0776 hypothetical protein
YP_004111019.1	manually curated; KEGG: bra:BRADO6641 hypothetical protein
YP_004111020.1	KEGG: reu:Reut_B5593 hypothetical protein
YP_004111021.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll6791 putative acyl-CoA dehydrogenase
YP_004111022.1	KEGG: bja:blr6797 putative citrate lyase; PFAM: HpcH/HpaI aldolase
YP_004111023.1	PFAM: IMP dehydrogenase/GMP reductase; KEGG: azl:AZL_e03110 GMP reductase
YP_004111024.1	TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: oca:OCAR_5052 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein
YP_004111025.1	KEGG: bra:BRADO2399 putative signal peptide; PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein)
YP_004111026.1	PFAM: thioesterase superfamily protein; KEGG: bja:blr7284 hypothetical protein
YP_004111027.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bra:BRADO2426 putative diguanylate cyclase (GGDEF); SMART: GGDEF domain containing protein
YP_004111028.1	KEGG: pna:Pnap_3569 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase
YP_004111029.1	KEGG: cak:Caul_1955 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase
YP_004111030.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bte:BTH_II1698 enoyl-(acyl carrier protein) reductase
YP_004111031.1	PFAM: protein of unknown function DUF344; KEGG: rfr:Rfer_4046 hypothetical protein
YP_004111032.1	KEGG: nha:Nham_2580 hypothetical protein
YP_004111033.1	PFAM: BA14K family protein; KEGG: nha:Nham_0272 hypothetical protein
YP_004111034.1	KEGG: ppd:Ppro_3271 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20
YP_004111035.1	PFAM: Protein of unknown function DUF2254, membrane; KEGG: mch:Mchl_3348 formate C-acetyltransferase glycine radical
YP_004111036.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bja:blr2591 serine protease DO-like protease; SMART: PDZ/DHR/GLGF domain protein
YP_004111037.1	KEGG: bid:Bind_2062 hypothetical protein
YP_004111038.1	KEGG: nha:Nham_1414 hypothetical protein
YP_004111039.1	KEGG: bja:blr6155 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004111040.1	PFAM: inner-membrane translocator; KEGG: bra:BRADO1746 ABC transporter permease
YP_004111041.1	PFAM: inner-membrane translocator; KEGG: bbt:BBta_2058 ABC transporter permease
YP_004111042.1	PFAM: basic membrane lipoprotein; KEGG: bbt:BBta_2057 putative ABC transporter (substrate-binding protein)
YP_004111043.1	SMART: PDZ/DHR/GLGF domain protein; KEGG: nha:Nham_3491 PDZ/DHR/GLGF
YP_004111044.1	KEGG: oca:OCAR_5669 LpsH
YP_004111045.1	KEGG: bid:Bind_1866 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004111046.1	KEGG: bja:blr7577 UDP-hexose transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF
YP_004111047.1	PFAM: glycoside hydrolase family 5; KEGG: bja:blr3367 cellulase
YP_004111048.1	PFAM: O-antigen polymerase; KEGG: bja:blr3366 hypothetical protein
YP_004111049.1	PFAM: lipopolysaccharide biosynthesis protein; KEGG: bja:blr3362 hypothetical protein
YP_004111050.1	PFAM: glycosyl transferase group 1; KEGG: bja:bll3361 glycosyl transferase
YP_004111051.1	KEGG: bja:bll3360 hypothetical protein
YP_004111052.1	KEGG: rhi:NGR_b19050 hypothetical protein
YP_004111053.1	KEGG: bja:bll3363 hypothetical protein; manually curated; PFAM: polysaccharide biosynthesis protein
YP_004111054.1	KEGG: bja:bll0244 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase
YP_004111055.1	PFAM: protein of unknown function DUF861 cupin_3; KEGG: bra:BRADO0883 putative RmlC-like cupin family protein
YP_004111056.1	PFAM: Protein of unknown function DUF2478; KEGG: sit:TM1040_2053 3-dehydroquinate dehydratase
YP_004111057.1	KEGG: bra:BRADO5383 putative ferredoxin protein, FixX
YP_004111058.1	KEGG: bbt:BBta_5870 FixC protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
YP_004111059.1	PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: bra:BRADO5385 protein FixB; electron transfer flavoprotein alpha chain
YP_004111060.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bbt:BBta_5872 protein FixA
YP_004111062.1	PFAM: nitrogen fixation protein NifW; KEGG: bja:blr1771 nitrogenase stabilizing/protective protein
YP_004111063.1	KEGG: bra:BRADO5390 homocitrate synthase; TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase
YP_004111064.1	TIGRFAM: cysteine desulfurase NifS; KEGG: met:M446_3581 cysteine desulfurase NifS; PFAM: aminotransferase class V
YP_004111065.1	KEGG: met:M446_3582 Fe-S cluster assembly protein NifU; TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein
YP_004111066.1	KEGG: mlo:mll5942 hypothetical protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein
YP_004111067.1	PFAM: NifQ family protein; KEGG: bra:BRADO5393 putative nitrogen fixation protein NifQ
YP_004111068.1	TIGRFAM: ferredoxin III, nif-specific; KEGG: met:M446_3542 ferredoxin III, nif-specific
YP_004111069.1	PFAM: protein of unknown function DUF683; KEGG: met:M446_3541 hypothetical protein
YP_004111070.1	KEGG: bid:Bind_0479 nitrogen fixation protein; TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269
YP_004111071.1	KEGG: azc:AZC_1036 nitrogenase molybdenum-iron NifX protein; TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein
YP_004111072.1	TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: mca:MCA0234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1
YP_004111073.1	KEGG: mca:MCA0233 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1
YP_004111074.1	TIGRFAM: nitrogenase molybdenum-iron protein beta chain; KEGG: azc:AZC_1039 nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1
YP_004111075.1	TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; KEGG: msl:Msil_3631 nitrogenase molybdenum-iron protein alpha chain; PFAM: oxidoreductase/nitrogenase component 1
YP_004111076.1	TIGRFAM: nitrogenase iron protein; KEGG: met:M446_3534 nitrogenase reductase; PFAM: NifH/frxC-family protein
YP_004111077.1	KEGG: msl:Msil_3634 hypothetical protein
YP_004111078.1	KEGG: bid:Bind_0405 hypothetical protein
YP_004111079.1	KEGG: bxe:Bxe_B1454 nitrogen fixation protein; TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein
YP_004111080.1	PFAM: NifZ family protein; KEGG: msl:Msil_3640 NifZ family protein
YP_004111081.1	PFAM: NifZ family protein; KEGG: min:Minf_0458 NifZ domain
YP_004111082.1	PFAM: LRV FeS4 cluster domain protein; KEGG: azc:AZC_3418 hypothetical protein
YP_004111083.1	KEGG: xau:Xaut_0114 hypothetical protein
YP_004111084.1	KEGG: mca:MCA0206 HesB/YadR/YfhF family protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein
YP_004111085.1	KEGG: bbt:BBta_5903 ferredoxin-like (in nif region)
YP_004111086.1	KEGG: azc:AZC_3414 nitrogenase cofactor biosynthesis protein; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein
YP_004111087.1	KEGG: gdj:Gdia_1575 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004111088.1	TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; KEGG: bbt:BBta_5933 NifA subfamily transcriptional regulator; SMART: GAF domain protein; AAA ATPase
YP_004111089.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_5935 FixR protein
YP_004111090.1	KEGG: bbt:BBta_5936 hypothetical protein
YP_004111091.1	KEGG: bja:blr6523 putative iron transport protein; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein
YP_004111092.1	PFAM: FeoA family protein; KEGG: bra:BRADO5587 putative FeoA family protein
YP_004111094.1	KEGG: bbt:BBta_2902 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004111095.1	KEGG: ami:Amir_3294 acyl transferase
YP_004111096.1	KEGG: rsq:Rsph17025_4020 ribulose bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like
YP_004111097.1	TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: nha:Nham_4048 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II
YP_004111098.1	KEGG: bbt:BBta_6399 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region
YP_004111099.1	KEGG: bbt:BBta_6400 phosphoribulokinase
YP_004111100.1	PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: nha:Nham_3754 fructose-1,6-bisphosphatase
YP_004111101.1	KEGG: sth:STH2045 esterase; PFAM: alpha/beta hydrolase fold
YP_004111102.1	KEGG: bja:blr3703 flagellar hook-associated protein; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein
YP_004111103.1	KEGG: bbt:BBta_3167 hypothetical protein
YP_004111104.1	KEGG: swi:Swit_3816 translation initiation factor IF-2
YP_004111105.1	KEGG: bja:blr3700 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein
YP_004111106.1	PFAM: flagellar hook capping protein; KEGG: bbt:BBta_3164 putative basal-body rod modification protein FlgD
YP_004111107.1	KEGG: bja:blr3698 hypothetical protein
YP_004111108.1	KEGG: bbt:BBta_3161 putative flagellar protein FliS
YP_004111109.1	PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; flagellin hook IN repeat protein; KEGG: bbt:BBta_3160 putative flagellar hook-associated protein 2 (HAP2, FliD protein)
YP_004111110.1	PFAM: flagellin domain protein; KEGG: bbt:BBta_3159 putative flagellin
YP_004111111.1	KEGG: bra:BRADO4891 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2
YP_004111112.1	KEGG: bbt:BBta_3157 hypothetical protein
YP_004111113.1	TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: nha:Nham_3615 alpha,alpha-trehalose-phosphate synthase; PFAM: glycosyl transferase family 20
YP_004111114.1	KEGG: bja:bll0323 trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase
YP_004111115.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll0324 putative sugar transport protein
YP_004111116.1	KEGG: bja:bll0327 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004111117.1	PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bra:BRADO6957 putative carbon-monoxide dehydrogenase small subunit, CoxS-like protein
YP_004111118.1	PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bra:BRADO6958 putative carbon-monoxide dehydrogenase large subunit, CoxL-like protein
YP_004111119.1	KEGG: bbt:BBta_0572 putative carbon monoxide dehydrogenase medium subunit, CoxM-like protein; PFAM: molybdopterin dehydrogenase FAD-binding
YP_004111120.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr0338 alpha-methylacyl-CoA racemase
YP_004111121.1	TIGRFAM: fumarylacetoacetase; KEGG: bbt:BBta_0567 fumarylacetoacetate hydrolase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase
YP_004111122.1	KEGG: nha:Nham_0920 maleylacetoacetate isomerase; TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain
YP_004111123.1	TIGRFAM: homogentisate 1,2-dioxygenase; KEGG: bja:bll0343 homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase
YP_004111124.1	KEGG: bbt:BBta_0565 putative metallo-beta-lactamase family protein
YP_004111125.1	KEGG: nha:Nham_0923 hypothetical protein
YP_004111126.1	PFAM: monooxygenase FAD-binding; KEGG: nha:Nham_0924 FAD-dependent oxidoreductase
YP_004111127.1	KEGG: bra:BRADO6970 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR
YP_004111128.1	KEGG: nwi:Nwi_3029 peptidase C14; PFAM: peptidase C14 caspase catalytic subunit p20; TPR repeat-containing protein; SMART: Tetratricopeptide repeat
YP_004111129.1	PFAM: OmpA/MotB domain protein; KEGG: bbt:BBta_0555 hypothetical protein
YP_004111130.1	KEGG: nha:Nham_3611 secretion protein HlyD
YP_004111131.1	PFAM: acriflavin resistance protein; KEGG: nha:Nham_3610 acriflavin resistance protein
YP_004111132.1	PFAM: AsmA family protein; KEGG: nha:Nham_3609 AsmA
YP_004111133.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bbt:BBta_0549 hypothetical protein
YP_004111134.1	KEGG: ppu:PP_1576 immunity protein, putative
YP_004111135.1	TIGRFAM: lysyl-tRNA synthetase; KEGG: nwi:Nwi_0151 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic
YP_004111136.1	KEGG: nha:Nham_0202 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor
YP_004111137.1	PFAM: glycosyl transferase family 2; KEGG: oca:OCAR_4666 glycosyl transferase, family 2
YP_004111138.1	PFAM: electron transport protein SCO1/SenC; KEGG: bbt:BBta_0787 putative electron transport protein
YP_004111139.1	KEGG: bja:blr1130 hypothetical protein
YP_004111140.1	KEGG: bbt:BBta_1388 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein
YP_004111141.1	KEGG: bja:bll4535 hypothetical protein
YP_004111142.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bpa:BPP0371 NADH:flavin oxidoreductase / NADH oxidase family protein
YP_004111143.1	PFAM: conserved hypothetical protein; KEGG: azc:AZC_3350 hypothetical protein
YP_004111144.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bra:BRADO2335 protochatechuate degradation transcriptional regulator
YP_004111145.1	PFAM: protein of unknown function DUF453; KEGG: azo:azo2544 hypothetical protein
YP_004111146.1	PFAM: amidohydrolase 2; KEGG: bra:BRADO2337 4-oxalomesaconate hydratase
YP_004111147.1	KEGG: mag:amb0252 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase
YP_004111148.1	PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bra:BRADO2339 dehydrogenase
YP_004111149.1	PFAM: amidohydrolase 2; KEGG: bra:BRADO2340 2-pyrone-4,6-dicarboxylic acid hydrolase
YP_004111150.1	TIGRFAM: protocatechuate 4,5-dioxygenase, alpha subunit; KEGG: bbt:BBta_2701 protocatechuate 4,5-dioxygenase subunit alpha; PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit
YP_004111151.1	PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bra:BRADO2342 protocatechuate 4,5-dioxygenase subunit beta
YP_004111152.1	PFAM: oxidoreductase domain protein; KEGG: bra:BRADO2343 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
YP_004111153.1	KEGG: nha:Nham_3738 hypothetical protein
YP_004111154.1	KEGG: bja:blr1323 phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like
YP_004111155.1	KEGG: oca:OCAR_7372 DedA family
YP_004111156.1	KEGG: bra:BRADO6577 putative signal peptide
YP_004111157.1	PFAM: 2-nitropropane dioxygenase NPD; KEGG: bbt:BBta_0960 putative dioxygenase
YP_004111158.1	KEGG: bja:blr1328 hypothetical protein
YP_004111159.1	KEGG: bbt:BBta_0975 hypothetical protein
YP_004111160.1	KEGG: bra:BRADO6560 putative signal peptide
YP_004111161.1	PFAM: TPR repeat-containing protein; KEGG: nar:Saro_3797 SARP family transcriptional regulator
YP_004111162.1	KEGG: mar:MAE_00590 putative peptidase PatA-like protein
YP_004111163.1	PFAM: Protein of unknown function DUF2478; KEGG: mch:Mchl_5508 hypothetical protein
YP_004111164.1	TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; KEGG: bja:blr6953 molybdenum ABC transporter ATP-binding protein; SMART: AAA ATPase
YP_004111165.1	KEGG: bbt:BBta_2079 molybdenum ABC transporter permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004111166.1	KEGG: bja:blr6951 molybdenum ABC transporter molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1
YP_004111167.1	KEGG: nha:Nham_2953 ModE family transcriptional regulator; TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein
YP_004111168.1	PFAM: TOBE domain protein; KEGG: mlo:msr1466 molybdo-pterin binding protein
YP_004111169.1	PFAM: Protein of unknown function DUF2478; KEGG: nha:Nham_3410 hypothetical protein
YP_004111170.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: rfr:Rfer_3209 pyruvate flavodoxin/ferredoxin oxidoreductase-like
YP_004111171.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: rfr:Rfer_3208 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase
YP_004111172.1	KEGG: azc:AZC_3513 hypothetical protein
YP_004111173.1	TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: bja:blr8131 DNA polymerase I; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease
YP_004111174.1	TIGRFAM: orotate phosphoribosyltransferase; KEGG: nha:Nham_0451 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_004111175.1	KEGG: bja:blr8135 hypothetical protein
YP_004111176.1	KEGG: bja:bll8136 hypothetical protein
YP_004111177.1	KEGG: bbt:BBta_7363 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35
YP_004111178.1	KEGG: bja:blr8140 hypothetical protein
YP_004111179.1	KEGG: nwi:Nwi_0352 arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase
YP_004111180.1	KEGG: bra:BRADO3397 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004111181.1	KEGG: nha:Nham_0672 hypothetical protein
YP_004111182.1	PFAM: ChaC family protein; KEGG: bbt:BBta_1180 putative cation transport protein ChaC-related
YP_004111183.1	KEGG: bja:blr1393 1-acylglycerol-3-phosphate O-acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase
YP_004111184.1	PFAM: protein of unknown function DUF218; KEGG: nha:Nham_0669 hypothetical protein
YP_004111185.1	PFAM: protein of unknown function DUF214; KEGG: bja:blr1391 cell division protein
YP_004111186.1	TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: bra:BRADO6470 cell division ABC transpoter ATP-binding protein; SMART: AAA ATPase
YP_004111187.1	TIGRFAM: MJ0042 family finger-like protein; KEGG: nha:Nham_0666 zinc finger/thioredoxin putative
YP_004111188.1	KEGG: bja:bll1388 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver
YP_004111189.1	KEGG: nha:Nham_0664 hypothetical protein
YP_004111190.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll1385 putative gamma carboxymuconolactone decarboxylase protein
YP_004111191.1	KEGG: bja:blr1383 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2
YP_004111192.1	KEGG: nwi:Nwi_0714 hypothetical protein
YP_004111193.1	KEGG: bja:blr1381 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase
YP_004111194.1	PFAM: Redoxin domain protein; KEGG: bra:BRADO6488 thiol:disulfide interchange protein TlpA (cytochrome c biogenesis protein TlpA)
YP_004111195.1	PFAM: protein of unknown function DUF1428; KEGG: oca:OCAR_4758 RNA signal recognition particle 4.5S RNA
YP_004111196.1	KEGG: bbt:BBta_1143 hypothetical protein
YP_004111197.1	KEGG: ara:Arad_0487 NAD(P)H dehydrogenase (quinone) protein; PFAM: NAD(P)H dehydrogenase (quinone)
YP_004111198.1	PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mlo:mlr7815 transcriptional regulator
YP_004111199.1	KEGG: nha:Nham_3479 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein
YP_004111200.1	PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: bja:blr1378 electron transfer flavoprotein large subunit
YP_004111201.1	PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bja:blr1377 electron transfer flavoprotein beta subunit
YP_004111202.1	TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: bra:BRADO6493 putative ATP:cob(I)alamin adenosyltransferase, monofunctional PduO type; PFAM: cobalamin adenosyltransferase
YP_004111203.1	KEGG: bja:blr1375 hypothetical protein
YP_004111204.1	KEGG: nwi:Nwi_0750 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN
YP_004111205.1	KEGG: bja:blr1373 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver
YP_004111206.1	PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: bja:blr1372 glutamyl-Q tRNA(Asp) synthetase
YP_004111207.1	KEGG: bja:bll1371 DNA-3-methyladenine glycosidase II; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein
YP_004111208.1	KEGG: bja:bll0699 nickel responsive regulator; TIGRFAM: nickel-responsive transcriptional regulator NikR; PFAM: NikR nickel binding
YP_004111209.1	PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bra:BRADO5677 putative iron transport outer membrane receptor
YP_004111210.1	PFAM: PRC-barrel domain protein; KEGG: oca:OCAR_6906 PRC-barrel domain protein
YP_004111211.1	KEGG: bra:BRADO0511 alpha-glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain
YP_004111212.1	KEGG: lth:KLTH0F01518g KLTH0F01518p
YP_004111213.1	KEGG: rle:RL2002 putative transposase-related protein; manually curated; PFAM: transposase IS4 family protein
YP_004111214.1	KEGG: bcv:Bcav_3921 alpha/beta hydrolase fold-3 domain protein
YP_004111215.1	KEGG: dre:100006405 hypothetical LOC100006405
YP_004111217.1	KEGG: bja:bll1113 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding
YP_004111218.1	PFAM: multi antimicrobial extrusion protein MatE; KEGG: bra:BRADO6768 putative cation-driven multidrug efflux pump; putative membrane protein
YP_004111219.1	KEGG: bja:blr1107 hypothetical protein
YP_004111220.1	PFAM: NHL repeat containing protein; KEGG: avn:Avin_47060 L-sorbosone dehydrogenase
YP_004111221.1	PFAM: protein of unknown function DUF820; KEGG: bbt:BBta_6783 hypothetical protein
YP_004111222.1	KEGG: nha:Nham_0218 2'-deoxycytidine 5'-triphosphate deaminase
YP_004111223.1	KEGG: nha:Nham_0219 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein
YP_004111224.1	KEGG: mpo:Mpop_0125 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004111225.1	KEGG: met:M446_0136 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004111226.1	KEGG: mpo:Mpop_0123 cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain
YP_004111227.1	PFAM: DSBA oxidoreductase; KEGG: mea:Mex_1p2579 putative thioredoxin domain protein precursor
YP_004111228.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mea:Mex_1p2578 hypothetical protein
YP_004111229.1	PFAM: lipolytic protein G-D-S-L family; KEGG: bja:blr1104 hypothetical protein
YP_004111230.1	KEGG: nha:Nham_0221 hypothetical protein
YP_004111231.1	PFAM: conserved hypothetical protein; KEGG: bja:blr1102 hypothetical protein
YP_004111232.1	PFAM: ApaG domain protein; KEGG: bja:bll1101 ApaG
YP_004111233.1	KEGG: bja:bll2703 hypothetical protein
YP_004111234.1	PFAM: Hsp33 protein; KEGG: bra:BRADO6776 HSP33-like chaperonin
YP_004111235.1	TIGRFAM: ornithine carbamoyltransferase; KEGG: nha:Nham_0643 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region
YP_004111236.1	TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: nha:Nham_0642 acetylornithine transaminase protein; PFAM: aminotransferase class-III
YP_004111237.1	PFAM: GcrA cell cycle regulator; KEGG: nha:Nham_0641 GcrA cell cycle regulator
YP_004111238.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bra:BRADO1679 two-component regulatory system response regulator; SMART: response regulator receiver
YP_004111239.1	KEGG: nha:Nham_0639 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein
YP_004111240.1	TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: nha:Nham_0638 phosphate ABC transporter permease; SMART: AAA ATPase
YP_004111241.1	KEGG: bra:BRADO1676 high-affinity phosphate ABC transporter membrane protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004111242.1	KEGG: bja:blr1092 phosphate ABC transporter permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component
YP_004111243.1	KEGG: oca:OCAR_4646 phosphate ABC transporter; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1
YP_004111244.1	KEGG: bja:blr1090 phosphate regulon, two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein
YP_004111245.1	KEGG: bra:BRADO6783 hypothetical protein
YP_004111246.1	KEGG: nha:Nham_0632 hypothetical protein
YP_004111247.1	PFAM: OmpA/MotB domain protein; KEGG: bja:blr1084 hypothetical protein
YP_004111248.1	PFAM: polysaccharide deacetylase; KEGG: nha:Nham_0630 polysaccharide deacetylase
YP_004111249.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_0751 putative short-chain dehydrogenase/reductase (SDR)
YP_004111250.1	PFAM: shikimate kinase; helix-turn-helix domain protein; KEGG: bja:bll1076 anaerobic benzoate catabolism transcriptional regulator; SMART: helix-turn-helix domain protein
YP_004111251.1	PFAM: extracellular solute-binding protein family 1; KEGG: nha:Nham_3686 extracellular solute-binding protein
YP_004111252.1	KEGG: bja:bll1031 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein
YP_004111253.1	TIGRFAM: phage head-tail adaptor; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: nha:Nham_3684 response regulator receiver sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver
YP_004111254.1	KEGG: bja:bll1029 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004111255.1	KEGG: bra:BRADO6834 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein
YP_004111256.1	PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: oca:OCAR_4639 cytochrome d ubiquinol oxidase subunit 1
YP_004111257.1	KEGG: oca:OCAR_4638 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II
YP_004111258.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bra:BRADO6837 putative ErfK/YbiS/YcfS/YnhG
YP_004111259.1	KEGG: bra:BRADO6838 general L-amino acid-binding periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3
YP_004111260.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1022 isovaleryl-CoA dehydrogenase
YP_004111261.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1021 putative acyl-CoA dehydrogenase
YP_004111262.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: bbt:BBta_0701 hypothetical protein
YP_004111263.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr1017 MFS permease
YP_004111264.1	PFAM: protein of unknown function DUF938; KEGG: bbt:BBta_0698 hypothetical protein
YP_004111265.1	PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bja:bll4766 hypothetical protein
YP_004111266.1	KEGG: nwi:Nwi_2376 hypothetical protein
YP_004111267.1	KEGG: fma:FMG_0036 N-acetylmuramoyl-L-alanine amidase
YP_004111268.1	PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_7080 branched chain amino acid ABC transporter periplasmic-binding protein
YP_004111269.1	KEGG: bbt:BBta_0686 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_004111270.1	PFAM: protein of unknown function DUF214; KEGG: nha:Nham_0345 hypothetical protein
YP_004111271.1	KEGG: nha:Nham_0344 hypothetical protein
YP_004111272.1	PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); KEGG: bja:bll0998 hypothetical protein
YP_004111273.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr0998 periplasmic substrate binding protein
YP_004111274.1	KEGG: oca:OCAR_5916 hypothetical protein
YP_004111275.1	KEGG: bbt:BBta_1326 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_004111276.1	KEGG: nha:Nham_1886 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein
YP_004111277.1	KEGG: nha:Nham_1885 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver
YP_004111278.1	KEGG: nha:Nham_1884 peptidase
YP_004111279.1	KEGG: mch:Mchl_2421 major facilitator superfamily MFS_1
YP_004111280.1	TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: bja:blr0961 methylthioribose-1-phosphate isomerase; PFAM: initiation factor 2B related
YP_004111281.1	TIGRFAM: methylthioadenosine phosphorylase; KEGG: bra:BRADO6904 5'-methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1
YP_004111282.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: bja:bll0995 maleylacetate reductase
YP_004111283.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll0994 acyl-CoA synthetase
YP_004111284.1	TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; helicase domain protein; DEAD/DEAH box helicase domain protein; HRDC domain protein; KEGG: bbt:BBta_6924 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein
YP_004111285.1	KEGG: azc:AZC_4413 hypothetical protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB
YP_004111286.1	KEGG: nha:Nham_0415 hypothetical protein
YP_004111287.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll0843 putative crotonobetaine/carnitine-CoA ligase
YP_004111288.1	PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: nha:Nham_4035 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase
YP_004111289.1	KEGG: nha:Nham_4036 hypothetical protein
YP_004111290.1	KEGG: bbt:BBta_7870 putative carboxymethylenebutenolidase
YP_004111291.1	PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bja:blr0835 polysaccharide export protein
YP_004111292.1	TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bja:blr0834 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A
YP_004111293.1	KEGG: bja:blr0833 hypothetical protein
YP_004111294.1	KEGG: bbt:BBta_7874 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20