-- dump date 20140620_032712 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_004106379.1 316931397 10067269 167..1576 1 NC_014834.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: bbt:BBta_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 1576 10067269 Rpdx1_0001 Rhodopseudomonas palustris DX-1 chromosomal replication initiator protein DnaA YP_004106379.1 167 D 652103 CDS YP_004106380.1 316931398 10062188 1821..2939 1 NC_014834.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: nha:Nham_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 2939 10062188 Rpdx1_0002 Rhodopseudomonas palustris DX-1 DNA polymerase III subunit beta YP_004106380.1 1821 D 652103 CDS YP_004106381.1 316931399 10062189 3081..4265 1 NC_014834.1 KEGG: bra:BRADO0003 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF 4265 10062189 Rpdx1_0003 Rhodopseudomonas palustris DX-1 DNA replication and repair protein RecF YP_004106381.1 3081 D 652103 CDS YP_004106382.1 316931400 10062190 4482..6923 1 NC_014834.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: nha:Nham_0004 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; DNA gyrase subunit B 6923 10062190 Rpdx1_0004 Rhodopseudomonas palustris DX-1 DNA gyrase subunit B YP_004106382.1 4482 D 652103 CDS YP_004106383.1 316931401 10062191 7604..9301 1 NC_014834.1 KEGG: mag:amb3054 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 9301 10062191 Rpdx1_0005 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004106383.1 7604 D 652103 CDS YP_004106384.1 316931402 10062192 complement(9356..10804) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-4 domain protein; KEGG: rru:Rru_A2544 signal transduction histidine kinase; SMART: PAS domain containing protein; signal transduction histidine kinase 10804 10062192 Rpdx1_0006 Rhodopseudomonas palustris DX-1 signal transduction histidine kinase YP_004106384.1 9356 R 652103 CDS YP_004106385.1 316931403 10062193 complement(10801..11085) 1 NC_014834.1 PFAM: KaiB domain protein; KEGG: rru:Rru_A2543 KaiB; KaiB domain-containing protein 11085 10062193 Rpdx1_0007 Rhodopseudomonas palustris DX-1 KaiB domain-containing protein YP_004106385.1 10801 R 652103 CDS YP_004106386.1 316931404 10062194 complement(11095..12786) 1 NC_014834.1 PFAM: Circadian clock protein KaiC central region; KEGG: rsk:RSKD131_4430 circadian clock protein KaiC; SMART: AAA ATPase; circadian clock protein KaiC 12786 10062194 Rpdx1_0008 Rhodopseudomonas palustris DX-1 circadian clock protein KaiC YP_004106386.1 11095 R 652103 CDS YP_004106387.1 316931405 10062195 complement(13021..14100) 1 NC_014834.1 PFAM: chemotaxis sensory transducer; KEGG: bja:bll4376 hypothetical protein; methyl-accepting chemotaxis sensory transducer 14100 10062195 Rpdx1_0009 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004106387.1 13021 R 652103 CDS YP_004106388.1 316931406 10062196 complement(14363..14872) 1 NC_014834.1 KEGG: bja:blr8125 transcriptional regulatory protein; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 14872 10062196 Rpdx1_0010 Rhodopseudomonas palustris DX-1 AsnC family transcriptional regulator YP_004106388.1 14363 R 652103 CDS YP_004106389.1 316931407 10062197 complement(15182..15391) 1 NC_014834.1 KEGG: bbt:BBta_2219 hypothetical protein; hypothetical protein 15391 10062197 Rpdx1_0011 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106389.1 15182 R 652103 CDS YP_004106390.1 316931408 10062198 complement(15532..15783) 1 NC_014834.1 KEGG: vap:Vapar_3641 glutathione S-transferase domain protein; hypothetical protein 15783 10062198 Rpdx1_0012 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106390.1 15532 R 652103 CDS YP_004106391.1 316931409 10062199 complement(15785..15970) 1 NC_014834.1 KEGG: bra:BRADO2445 nitrogen fixation protein FixS; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; cbb3-type cytochrome oxidase maturation protein 15970 10062199 Rpdx1_0013 Rhodopseudomonas palustris DX-1 cbb3-type cytochrome oxidase maturation protein YP_004106391.1 15785 R 652103 CDS YP_004106392.1 316931410 10062200 complement(15961..18159) 1 NC_014834.1 KEGG: bbt:BBta_2797 nitrogen fixation protein FixI; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; copper-translocating P-type ATPase 18159 10062200 Rpdx1_0014 Rhodopseudomonas palustris DX-1 copper-translocating P-type ATPase YP_004106392.1 15961 R 652103 CDS YP_004106393.1 316931411 10062201 complement(18194..18694) 1 NC_014834.1 PFAM: FixH family protein; KEGG: bra:BRADO2443 nitrogen fixation protein FixH; FixH family protein 18694 10062201 Rpdx1_0015 Rhodopseudomonas palustris DX-1 FixH family protein YP_004106393.1 18194 R 652103 CDS YP_004106394.1 316931412 10062202 complement(18714..20171) 1 NC_014834.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: bbt:BBta_2795 nitrogen fixation protein; cytochrome c oxidase accessory protein CcoG 20171 10062202 Rpdx1_0016 Rhodopseudomonas palustris DX-1 cytochrome c oxidase accessory protein CcoG YP_004106394.1 18714 R 652103 CDS YP_004106395.1 316931413 10062203 complement(20284..21165) 1 NC_014834.1 KEGG: bra:BRADO2441 cytochrome-c oxidase FixP chain; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; cbb3-type cytochrome c oxidase subunit III 21165 10062203 Rpdx1_0017 Rhodopseudomonas palustris DX-1 cbb3-type cytochrome c oxidase subunit III YP_004106395.1 20284 R 652103 CDS YP_004106396.1 316931414 10062204 complement(21173..21337) 1 NC_014834.1 KEGG: bra:BRADO2440 cytochrome oxidase subunit, FixQ; hypothetical protein 21337 10062204 Rpdx1_0018 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106396.1 21173 R 652103 CDS YP_004106397.1 316931415 10062205 complement(21347..22081) 1 NC_014834.1 KEGG: bbt:BBta_2793 cytochrome-c oxidase FixO chain; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cbb3-type cytochrome c oxidase subunit II 22081 10062205 Rpdx1_0019 Rhodopseudomonas palustris DX-1 cbb3-type cytochrome c oxidase subunit II YP_004106397.1 21347 R 652103 CDS YP_004106398.1 316931416 10062206 complement(22094..23740) 1 NC_014834.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; KEGG: bja:blr2763 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; cbb3-type cytochrome c oxidase subunit I 23740 10062206 Rpdx1_0020 Rhodopseudomonas palustris DX-1 cbb3-type cytochrome c oxidase subunit I YP_004106398.1 22094 R 652103 CDS YP_004106399.1 316931417 10062207 complement(24039..24776) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO0329 putative acetoin(diacetyl) reductase (acetoin dehydrogenase) (AR) (meso-2,3-butanediol dehydrogenase); oxidoreductase, short chain dehydrogenase; putative short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 24776 10062207 Rpdx1_0021 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004106399.1 24039 R 652103 CDS YP_004106400.1 316931418 10062208 complement(24896..25498) 1 NC_014834.1 PFAM: DSBA oxidoreductase; KEGG: bja:blr0588 hypothetical protein; DSBA oxidoreductase 25498 10062208 Rpdx1_0022 Rhodopseudomonas palustris DX-1 DSBA oxidoreductase YP_004106400.1 24896 R 652103 CDS YP_004106401.1 316931419 10062209 25714..26382 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bja:bll0585 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein 26382 10062209 Rpdx1_0023 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004106401.1 25714 D 652103 CDS YP_004106402.1 316931420 10062210 complement(26505..27380) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oca:OCAR_4340 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 27380 10062210 Rpdx1_0024 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004106402.1 26505 R 652103 CDS YP_004106403.1 316931421 10062211 complement(27630..29363) 1 NC_014834.1 TIGRFAM: gamma-glutamyltransferase; KEGG: nha:Nham_0191 gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 29363 10062211 Rpdx1_0025 Rhodopseudomonas palustris DX-1 gamma-glutamyltransferase YP_004106403.1 27630 R 652103 CDS YP_004106404.1 316931422 10062212 29469..30866 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: nha:Nham_0192 major facilitator transporter; major facilitator superfamily protein 30866 10062212 Rpdx1_0026 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004106404.1 29469 D 652103 CDS YP_004106405.1 316931423 10062213 31081..32169 1 NC_014834.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: mlo:mll4988 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 32169 10062213 Rpdx1_0027 Rhodopseudomonas palustris DX-1 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004106405.1 31081 D 652103 CDS YP_004106406.1 316931424 10062215 complement(32381..33973) 1 NC_014834.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: bja:blr0581 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 33973 10062215 Rpdx1_0029 Rhodopseudomonas palustris DX-1 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_004106406.1 32381 R 652103 CDS YP_004106407.1 316931425 10062216 complement(34194..35909) 1 NC_014834.1 PFAM: Heparinase II/III family protein; KEGG: bja:blr0580 hypothetical protein; heparinase II/III family protein 35909 10062216 Rpdx1_0030 Rhodopseudomonas palustris DX-1 heparinase II/III family protein YP_004106407.1 34194 R 652103 CDS YP_004106408.1 316931426 10062217 complement(36247..37599) 1 NC_014834.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: bja:blr0579 SUN protein; Fmu (Sun) domain-containing protein 37599 10062217 Rpdx1_0031 Rhodopseudomonas palustris DX-1 Fmu (Sun) domain-containing protein YP_004106408.1 36247 R 652103 CDS YP_004106409.1 316931427 10062218 37755..37973 1 NC_014834.1 PFAM: protein of unknown function DUF1674; KEGG: nha:Nham_0198 hypothetical protein; hypothetical protein 37973 10062218 Rpdx1_0032 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106409.1 37755 D 652103 CDS YP_004106410.1 316931428 10062219 38057..38629 1 NC_014834.1 manually curated; PFAM: nuclease (SNase domain protein); KEGG: nwi:Nwi_0154 nuclease; SMART: nuclease (SNase domain protein); nuclease 38629 10062219 Rpdx1_0033 Rhodopseudomonas palustris DX-1 nuclease YP_004106410.1 38057 D 652103 CDS YP_004106411.1 316931429 10062220 complement(38645..39529) 1 NC_014834.1 KEGG: bra:BRADO0145 hypothetical protein; hypothetical protein 39529 10062220 Rpdx1_0034 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106411.1 38645 R 652103 CDS YP_004106412.1 316931430 10062221 39877..41334 1 NC_014834.1 PFAM: amine oxidase; KEGG: bbt:BBta_0209 amine oxidoreductase domain-containing protein; amine oxidase 41334 10062221 Rpdx1_0035 Rhodopseudomonas palustris DX-1 amine oxidase YP_004106412.1 39877 D 652103 CDS YP_004106413.1 316931431 10062222 complement(41341..43752) 1 NC_014834.1 KEGG: bra:BRADO0141 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 43752 10062222 Rpdx1_0036 Rhodopseudomonas palustris DX-1 phenylalanyl-tRNA synthetase subunit beta YP_004106413.1 41341 R 652103 CDS YP_004106414.1 316931432 10062223 complement(43897..44376) 1 NC_014834.1 KEGG: bbt:BBta_0213 hypothetical protein; hypothetical protein 44376 10062223 Rpdx1_0037 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106414.1 43897 R 652103 CDS YP_004106415.1 316931433 10062224 complement(44612..45694) 1 NC_014834.1 KEGG: nwi:Nwi_0066 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase subunit alpha 45694 10062224 Rpdx1_0038 Rhodopseudomonas palustris DX-1 phenylalanyl-tRNA synthetase subunit alpha YP_004106415.1 44612 R 652103 CDS YP_004106416.1 316931434 10062225 complement(45810..46169) 1 NC_014834.1 KEGG: nha:Nham_0075 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; 50S ribosomal protein L20 46169 10062225 Rpdx1_0039 Rhodopseudomonas palustris DX-1 50S ribosomal protein L20 YP_004106416.1 45810 R 652103 CDS YP_004106417.1 316931435 10062226 complement(46261..46461) 1 NC_014834.1 KEGG: bbt:BBta_0216 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 46461 10062226 Rpdx1_0040 Rhodopseudomonas palustris DX-1 50S ribosomal protein L35 YP_004106417.1 46261 R 652103 CDS YP_004106418.1 316931436 10062227 complement(46792..47331) 1 NC_014834.1 manually curated; TIGRFAM: translation initiation factor IF-3; KEGG: bbt:BBta_0218 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; translation initiation factor IF-3 47331 10062227 Rpdx1_0041 Rhodopseudomonas palustris DX-1 translation initiation factor IF-3 YP_004106418.1 46792 R 652103 CDS YP_004106419.1 316931437 10062228 47654..48439 1 NC_014834.1 KEGG: nha:Nham_0078 hypothetical protein; hypothetical protein 48439 10062228 Rpdx1_0042 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106419.1 47654 D 652103 CDS YP_004106420.1 316931438 10062229 complement(48432..49634) 1 NC_014834.1 PFAM: domain of unknown function DUF1730; KEGG: bja:bll0714 iron-sulfur cluster binding protein; hypothetical protein 49634 10062229 Rpdx1_0043 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106420.1 48432 R 652103 CDS YP_004106421.1 316931439 10062230 complement(49583..50275) 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_0222 putative glutathione S-transferase family protein; glutathione S-transferase domain-containing protein 50275 10062230 Rpdx1_0044 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004106421.1 49583 R 652103 CDS YP_004106422.1 316931440 10062231 50475..51281 1 NC_014834.1 KEGG: bja:blr0716 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 51281 10062231 Rpdx1_0045 Rhodopseudomonas palustris DX-1 undecaprenol kinase YP_004106422.1 50475 D 652103 CDS YP_004106423.1 316931441 10062232 complement(51337..52302) 1 NC_014834.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bra:BRADO0128 putative NAD dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 52302 10062232 Rpdx1_0046 Rhodopseudomonas palustris DX-1 NAD-dependent epimerase/dehydratase YP_004106423.1 51337 R 652103 CDS YP_004106424.1 316931442 10062234 52694..53329 1 NC_014834.1 KEGG: oca:OCAR_4455 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; 3'-5' exonuclease 53329 10062234 Rpdx1_0047 Rhodopseudomonas palustris DX-1 3'-5' exonuclease YP_004106424.1 52694 D 652103 CDS YP_004106425.1 316931443 10062235 53585..54313 1 NC_014834.1 PFAM: protein of unknown function DUF1239; KEGG: bja:blr0720 hypothetical protein; hypothetical protein 54313 10062235 Rpdx1_0048 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106425.1 53585 D 652103 CDS YP_004106426.1 316931444 10062236 54322..54987 1 NC_014834.1 PFAM: OstA family protein; KEGG: nha:Nham_0177 OstA-like protein; OstA family protein 54987 10062236 Rpdx1_0049 Rhodopseudomonas palustris DX-1 OstA family protein YP_004106426.1 54322 D 652103 CDS YP_004106427.1 316931445 10062237 55014..55163 1 NC_014834.1 hypothetical protein 55163 10062237 Rpdx1_0050 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106427.1 55014 D 652103 CDS YP_004106428.1 316931446 10062238 55186..56136 1 NC_014834.1 KEGG: nwi:Nwi_0174 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 56136 10062238 Rpdx1_0051 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004106428.1 55186 D 652103 CDS YP_004106429.1 316931447 10062239 56339..57982 1 NC_014834.1 KEGG: bbt:BBta_0121 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor core-binding region; sigma-54 factor; sigma-54 DNA-binding domain protein; RNA polymerase sigma 54 subunit RpoN 57982 10062239 Rpdx1_0052 Rhodopseudomonas palustris DX-1 RNA polymerase sigma 54 subunit RpoN YP_004106429.1 56339 D 652103 CDS YP_004106430.1 316931448 10062240 58039..58647 1 NC_014834.1 KEGG: bbt:BBta_0120 sigma 54 modulation protein / SSU ribosomal protein S30P; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; ribosomal subunit interface protein 58647 10062240 Rpdx1_0053 Rhodopseudomonas palustris DX-1 ribosomal subunit interface protein YP_004106430.1 58039 D 652103 CDS YP_004106431.1 316931449 10062241 58920..59381 1 NC_014834.1 KEGG: bra:BRADO0111 nitrogen regulatory protein; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; putative PTS IIA-like nitrogen-regulatory protein PtsN 59381 10062241 Rpdx1_0054 Rhodopseudomonas palustris DX-1 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_004106431.1 58920 D 652103 CDS YP_004106432.1 316931450 10062242 complement(59652..59918) 1 NC_014834.1 PFAM: protein of unknown function DUF1150; KEGG: bbt:BBta_0116 hypothetical protein; hypothetical protein 59918 10062242 Rpdx1_0055 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106432.1 59652 R 652103 CDS YP_004106433.1 316931451 10062243 complement(59968..60393) 1 NC_014834.1 PFAM: heat shock protein Hsp20; KEGG: oca:OCAR_4464 heat shock protein HSP20; heat shock protein Hsp20 60393 10062243 Rpdx1_0056 Rhodopseudomonas palustris DX-1 heat shock protein Hsp20 YP_004106433.1 59968 R 652103 CDS YP_004106434.1 316931452 10062244 complement(60545..61633) 1 NC_014834.1 KEGG: bja:bll0730 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein 61633 10062244 Rpdx1_0057 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004106434.1 60545 R 652103 CDS YP_004106435.1 316931453 10062245 complement(61639..62487) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll0731 glycerol-3-phosphate ABC transporter membrane spanning protein; binding-protein-dependent transporter inner membrane component 62487 10062245 Rpdx1_0058 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106435.1 61639 R 652103 CDS YP_004106436.1 316931454 10062246 complement(62487..63368) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll0732 glycerol-3-phosphate ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 63368 10062246 Rpdx1_0059 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106436.1 62487 R 652103 CDS YP_004106437.1 316931455 10062247 complement(63534..64862) 1 NC_014834.1 PFAM: extracellular solute-binding protein family 1; KEGG: bja:bll0733 ABC transporter glycerol-3-phosphate-binding protein; family 1 extracellular solute-binding protein 64862 10062247 Rpdx1_0060 Rhodopseudomonas palustris DX-1 family 1 extracellular solute-binding protein YP_004106437.1 63534 R 652103 CDS YP_004106438.1 316931456 10062248 complement(65081..66271) 1 NC_014834.1 KEGG: bja:bll0734 hypothetical protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; formyl-CoA transferase 66271 10062248 Rpdx1_0061 Rhodopseudomonas palustris DX-1 formyl-CoA transferase YP_004106438.1 65081 R 652103 CDS YP_004106439.1 316931457 10062250 complement(66608..67012) 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: bja:bll0737 hypothetical protein; hypothetical protein 67012 10062250 Rpdx1_0062 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106439.1 66608 R 652103 CDS YP_004106440.1 316931458 10062251 67156..68493 1 NC_014834.1 KEGG: bra:BRADO0098 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase 68493 10062251 Rpdx1_0063 Rhodopseudomonas palustris DX-1 3-phosphoshikimate 1-carboxyvinyltransferase YP_004106440.1 67156 D 652103 CDS YP_004106441.1 316931459 10062252 complement(68497..69171) 1 NC_014834.1 PFAM: protein of unknown function DUF374; KEGG: mag:amb4091 hypothetical protein; hypothetical protein 69171 10062252 Rpdx1_0064 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106441.1 68497 R 652103 CDS YP_004106442.1 316931460 10062253 69337..69975 1 NC_014834.1 TIGRFAM: cytidylate kinase; KEGG: bbt:BBta_0104 cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 69975 10062253 Rpdx1_0065 Rhodopseudomonas palustris DX-1 cytidylate kinase YP_004106442.1 69337 D 652103 CDS YP_004106443.1 316931461 10062254 70275..71972 1 NC_014834.1 KEGG: nha:Nham_0163 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein; 30S ribosomal protein S1 71972 10062254 Rpdx1_0066 Rhodopseudomonas palustris DX-1 30S ribosomal protein S1 YP_004106443.1 70275 D 652103 CDS YP_004106444.1 316931462 10062255 72197..73177 1 NC_014834.1 KEGG: bra:BRADO0095 S49 family peptidase; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 73177 10062255 Rpdx1_0067 Rhodopseudomonas palustris DX-1 signal peptide peptidase SppA, 36K type YP_004106444.1 72197 D 652103 CDS YP_004106445.1 316931463 10062256 73343..73657 1 NC_014834.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: bra:BRADO0094 integration host factor subunit beta; SMART: histone family protein DNA-binding protein; integration host factor subunit beta 73657 10062256 Rpdx1_0068 Rhodopseudomonas palustris DX-1 integration host factor subunit beta YP_004106445.1 73343 D 652103 CDS YP_004106446.1 316931464 10062257 73695..74081 1 NC_014834.1 KEGG: bja:blr0743 hypothetical protein; hypothetical protein 74081 10062257 Rpdx1_0069 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106446.1 73695 D 652103 CDS YP_004106447.1 316931465 10062258 74140..74781 1 NC_014834.1 KEGG: nwi:Nwi_0056 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); phosphoribosylanthranilate isomerase 74781 10062258 Rpdx1_0070 Rhodopseudomonas palustris DX-1 phosphoribosylanthranilate isomerase YP_004106447.1 74140 D 652103 CDS YP_004106448.1 316931466 10062259 74795..76009 1 NC_014834.1 KEGG: bra:BRADO0091 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; tryptophan synthase subunit beta 76009 10062259 Rpdx1_0071 Rhodopseudomonas palustris DX-1 tryptophan synthase subunit beta YP_004106448.1 74795 D 652103 CDS YP_004106449.1 316931467 10062260 76009..76845 1 NC_014834.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: bbt:BBta_0096 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 76845 10062260 Rpdx1_0072 Rhodopseudomonas palustris DX-1 tryptophan synthase subunit alpha YP_004106449.1 76009 D 652103 CDS YP_004106450.1 316931468 10062261 76954..77940 1 NC_014834.1 KEGG: nha:Nham_0061 acetyl-CoA carboxylase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase; acetyl-CoA carboxylase, carboxyl transferase subunit beta 77940 10062261 Rpdx1_0073 Rhodopseudomonas palustris DX-1 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_004106450.1 76954 D 652103 CDS YP_004106451.1 316931469 10062262 77937..79265 1 NC_014834.1 TIGRFAM: FolC bifunctional protein; KEGG: nha:Nham_0060 FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 79265 10062262 Rpdx1_0074 Rhodopseudomonas palustris DX-1 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_004106451.1 77937 D 652103 CDS YP_004106452.1 316931470 10062263 complement(79405..79725) 1 NC_014834.1 KEGG: oca:OCAR_4481 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin 79725 10062263 Rpdx1_0075 Rhodopseudomonas palustris DX-1 thioredoxin YP_004106452.1 79405 R 652103 CDS YP_004106453.1 316931471 10062264 complement(79822..83307) 1 NC_014834.1 TIGRFAM: double-strand break repair helicase AddA; KEGG: bja:bll0752 putative helicase 2; PFAM: UvrD/REP helicase; double-strand break repair helicase AddA 83307 10062264 Rpdx1_0076 Rhodopseudomonas palustris DX-1 double-strand break repair helicase AddA YP_004106453.1 79822 R 652103 CDS YP_004106454.1 316931472 10062265 complement(83304..86453) 1 NC_014834.1 TIGRFAM: double-strand break repair protein AddB; KEGG: bbt:BBta_0089 DNA helicase/exodeoxyribonuclease V, subunit B; double-strand break repair protein AddB 86453 10062265 Rpdx1_0077 Rhodopseudomonas palustris DX-1 double-strand break repair protein AddB YP_004106454.1 83304 R 652103 CDS YP_004106455.1 316931473 10062266 complement(86516..87238) 1 NC_014834.1 PFAM: Nucleotidyl transferase; KEGG: bja:bll0754 nucleotidyltransferase family protein; nucleotidyl transferase 87238 10062266 Rpdx1_0078 Rhodopseudomonas palustris DX-1 nucleotidyl transferase YP_004106455.1 86516 R 652103 CDS YP_004106456.1 316931474 10062267 complement(87387..87698) 1 NC_014834.1 KEGG: bbt:BBta_0087 hypothetical protein; hypothetical protein 87698 10062267 Rpdx1_0079 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106456.1 87387 R 652103 CDS YP_004106457.1 316931475 10062268 complement(87802..89322) 1 NC_014834.1 PFAM: protein of unknown function UPF0079; aminoglycoside phosphotransferase; KEGG: nha:Nham_0054 hypothetical protein; hypothetical protein 89322 10062268 Rpdx1_0080 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106457.1 87802 R 652103 CDS YP_004106458.1 316931476 10062269 complement(89319..91832) 1 NC_014834.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: nwi:Nwi_0045 histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 91832 10062269 Rpdx1_0081 Rhodopseudomonas palustris DX-1 PAS/PAC sensor signal transduction histidine kinase YP_004106458.1 89319 R 652103 CDS YP_004106459.1 316931477 10062270 complement(92051..92509) 1 NC_014834.1 KEGG: bbt:BBta_0084 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 92509 10062270 Rpdx1_0082 Rhodopseudomonas palustris DX-1 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_004106459.1 92051 R 652103 CDS YP_004106460.1 316931478 10062271 complement(92506..93951) 1 NC_014834.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: bja:bll0759 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 93951 10062271 Rpdx1_0083 Rhodopseudomonas palustris DX-1 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_004106460.1 92506 R 652103 CDS YP_004106461.1 316931479 10062272 complement(94005..95582) 1 NC_014834.1 KEGG: bbt:BBta_0082 2-octaprenylphenol hydroxylase; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; 2-polyprenylphenol 6-hydroxylase 95582 10062272 Rpdx1_0084 Rhodopseudomonas palustris DX-1 2-polyprenylphenol 6-hydroxylase YP_004106461.1 94005 R 652103 CDS YP_004106462.1 316931480 10062273 complement(95579..96340) 1 NC_014834.1 KEGG: bja:bll0761 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 96340 10062273 Rpdx1_0085 Rhodopseudomonas palustris DX-1 ubiquinone/menaquinone biosynthesis methyltransferase YP_004106462.1 95579 R 652103 CDS YP_004106463.1 316931481 10062274 96585..97460 1 NC_014834.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: bbt:BBta_0080 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; formamidopyrimidine-DNA glycosylase 97460 10062274 Rpdx1_0086 Rhodopseudomonas palustris DX-1 formamidopyrimidine-DNA glycosylase YP_004106463.1 96585 D 652103 CDS YP_004106464.1 316931482 10062275 complement(97521..98861) 1 NC_014834.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bja:bll0764 hypothetical protein; peptidoglycan-binding domain 1 protein 98861 10062275 Rpdx1_0087 Rhodopseudomonas palustris DX-1 peptidoglycan-binding domain 1 protein YP_004106464.1 97521 R 652103 CDS YP_004106465.1 316931483 10062276 99068..99868 1 NC_014834.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bra:BRADO0069 putative molybdopterin biosynthesis protein MoeB; UBA/THIF-type NAD/FAD-binding protein 99868 10062276 Rpdx1_0088 Rhodopseudomonas palustris DX-1 UBA/THIF-type NAD/FAD-binding protein YP_004106465.1 99068 D 652103 CDS YP_004106466.1 316931484 10062277 99993..101678 1 NC_014834.1 PFAM: protein of unknown function DUF894 DitE; KEGG: bja:blr0559 MFS permease; hypothetical protein 101678 10062277 Rpdx1_0089 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106466.1 99993 D 652103 CDS YP_004106467.1 316931485 10062278 complement(101783..102004) 1 NC_014834.1 KEGG: bra:BRADO0286 putative signal peptide; hypothetical protein 102004 10062278 Rpdx1_0090 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106467.1 101783 R 652103 CDS YP_004106468.1 316931486 10062279 complement(102082..102423) 1 NC_014834.1 PFAM: Phasin; KEGG: bja:blr3464 hypothetical protein; phasin family protein 102423 10062279 Rpdx1_0091 Rhodopseudomonas palustris DX-1 phasin family protein YP_004106468.1 102082 R 652103 CDS YP_004106469.1 316931487 10062280 complement(102664..103068) 1 NC_014834.1 KEGG: krh:KRH_09010 hypothetical protein; hypothetical protein 103068 10062280 Rpdx1_0092 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106469.1 102664 R 652103 CDS YP_004106470.1 316931488 10062281 complement(103144..103485) 1 NC_014834.1 KEGG: met:M446_4370 triple helix repeat-containing collagen; hypothetical protein 103485 10062281 Rpdx1_0093 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106470.1 103144 R 652103 CDS YP_004106471.1 316931489 10062282 103507..104139 1 NC_014834.1 KEGG: bma:BMAA1451.2 hypothetical protein; hypothetical protein 104139 10062282 Rpdx1_0094 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106471.1 103507 D 652103 CDS YP_004106472.1 316931490 10062283 104268..104942 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bbt:BBta_2740 TetR family transcriptional regulator; regulatory protein TetR 104942 10062283 Rpdx1_0095 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004106472.1 104268 D 652103 CDS YP_004106473.1 316931491 10062284 104939..105853 1 NC_014834.1 KEGG: bja:bll3835 hypothetical protein; hypothetical protein 105853 10062284 Rpdx1_0096 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106473.1 104939 D 652103 CDS YP_004106474.1 316931492 10062285 105983..107125 1 NC_014834.1 KEGG: nha:Nham_0992 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 107125 10062285 Rpdx1_0097 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004106474.1 105983 D 652103 CDS YP_004106475.1 316931493 10062286 107129..110278 1 NC_014834.1 KEGG: nha:Nham_0993 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 110278 10062286 Rpdx1_0098 Rhodopseudomonas palustris DX-1 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004106475.1 107129 D 652103 CDS YP_004106476.1 316931494 10062287 110415..110825 1 NC_014834.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: bra:BRADO6624 putative flagellar basal-body rod protein (FlgC); hypothetical protein 110825 10062287 Rpdx1_0099 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106476.1 110415 D 652103 CDS YP_004106477.1 316931495 10062288 complement(110860..111918) 1 NC_014834.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mrd:Mrad2831_4760 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 111918 10062288 Rpdx1_0100 Rhodopseudomonas palustris DX-1 oligopeptide/dipeptide ABC transporter ATPase YP_004106477.1 110860 R 652103 CDS YP_004106478.1 316931496 10062289 complement(111915..112913) 1 NC_014834.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mrd:Mrad2831_4761 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 112913 10062289 Rpdx1_0101 Rhodopseudomonas palustris DX-1 oligopeptide/dipeptide ABC transporter ATPase YP_004106478.1 111915 R 652103 CDS YP_004106479.1 316931497 10062290 complement(112916..113824) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mrd:Mrad2831_4762 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 113824 10062290 Rpdx1_0102 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106479.1 112916 R 652103 CDS YP_004106480.1 316931498 10062291 complement(113821..114801) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mrd:Mrad2831_4763 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 114801 10062291 Rpdx1_0103 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106480.1 113821 R 652103 CDS YP_004106481.1 316931499 10062292 complement(114830..116152) 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: mrd:Mrad2831_4764 extracellular solute-binding protein; family 5 extracellular solute-binding protein 116152 10062292 Rpdx1_0104 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004106481.1 114830 R 652103 CDS YP_004106482.1 316931500 10062293 complement(116149..116259) 1 NC_014834.1 hypothetical protein 116259 10062293 Rpdx1_0105 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106482.1 116149 R 652103 CDS YP_004106483.1 316931501 10062294 complement(116348..117301) 1 NC_014834.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mrd:Mrad2831_4765 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 117301 10062294 Rpdx1_0106 Rhodopseudomonas palustris DX-1 cobalamin synthesis protein P47K YP_004106483.1 116348 R 652103 CDS YP_004106484.1 316931502 10062295 complement(117298..118941) 1 NC_014834.1 PFAM: Amidohydrolase 3; KEGG: mrd:Mrad2831_4766 amidohydrolase 3; amidohydrolase 3 118941 10062295 Rpdx1_0107 Rhodopseudomonas palustris DX-1 amidohydrolase 3 YP_004106484.1 117298 R 652103 CDS YP_004106485.1 316931503 10062296 119031..120719 1 NC_014834.1 KEGG: mrd:Mrad2831_4755 transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 120719 10062296 Rpdx1_0108 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004106485.1 119031 D 652103 CDS YP_004106486.1 316931504 10062297 complement(120838..121626) 1 NC_014834.1 PFAM: protein of unknown function DUF81; KEGG: mrd:Mrad2831_4756 hypothetical protein; hypothetical protein 121626 10062297 Rpdx1_0109 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106486.1 120838 R 652103 CDS YP_004106487.1 316931505 10062298 complement(121635..123146) 1 NC_014834.1 PFAM: Aldehyde Dehydrogenase; KEGG: mrd:Mrad2831_4757 aldehyde dehydrogenase; aldehyde dehydrogenase 123146 10062298 Rpdx1_0110 Rhodopseudomonas palustris DX-1 aldehyde dehydrogenase YP_004106487.1 121635 R 652103 CDS YP_004106488.1 316931506 10062299 123358..123765 1 NC_014834.1 PFAM: protein of unknown function DUF1486; KEGG: mrd:Mrad2831_4758 hypothetical protein; hypothetical protein 123765 10062299 Rpdx1_0111 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106488.1 123358 D 652103 CDS YP_004106489.1 316931507 10062300 123762..125156 1 NC_014834.1 PFAM: FAD dependent oxidoreductase; KEGG: bph:Bphy_6224 FAD dependent oxidoreductase; FAD dependent oxidoreductase 125156 10062300 Rpdx1_0112 Rhodopseudomonas palustris DX-1 FAD dependent oxidoreductase YP_004106489.1 123762 D 652103 CDS YP_004106490.1 316931508 10062301 complement(125301..125609) 1 NC_014834.1 KEGG: xau:Xaut_4360 hypothetical protein; hypothetical protein 125609 10062301 Rpdx1_0113 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106490.1 125301 R 652103 CDS YP_004106491.1 316931509 10062302 126044..126781 1 NC_014834.1 TIGRFAM: methyltransferase FkbM family; KEGG: smd:Smed_1809 FkbM family methyltransferase; FkbM family methyltransferase 126781 10062302 Rpdx1_0114 Rhodopseudomonas palustris DX-1 FkbM family methyltransferase YP_004106491.1 126044 D 652103 CDS YP_004106492.1 316931510 10062303 126796..127686 1 NC_014834.1 KEGG: azc:AZC_3956 hypothetical protein; hypothetical protein 127686 10062303 Rpdx1_0115 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106492.1 126796 D 652103 CDS YP_004106493.1 316931511 10062304 127777..130056 1 NC_014834.1 KEGG: ava:Ava_1003 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; multi-sensor signal transduction histidine kinase 130056 10062304 Rpdx1_0116 Rhodopseudomonas palustris DX-1 multi-sensor signal transduction histidine kinase YP_004106493.1 127777 D 652103 CDS YP_004106494.1 316931512 10062305 130049..131689 1 NC_014834.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: app:CAP2UW1_2571 TrkA-N domain protein; TrkA-N domain-containing protein 131689 10062305 Rpdx1_0117 Rhodopseudomonas palustris DX-1 TrkA-N domain-containing protein YP_004106494.1 130049 D 652103 CDS YP_004106495.1 316931513 10062306 complement(131696..132520) 1 NC_014834.1 PFAM: metallophosphoesterase; KEGG: bja:bll4141 hypothetical protein; metallophosphoesterase 132520 10062306 Rpdx1_0118 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004106495.1 131696 R 652103 CDS YP_004106496.1 316931514 10062307 complement(132517..133341) 1 NC_014834.1 PFAM: metallophosphoesterase; KEGG: mlo:mll3631 3',5'-cyclic-nucleotide phosphodiesterase, CpdA; metallophosphoesterase 133341 10062307 Rpdx1_0119 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004106496.1 132517 R 652103 CDS YP_004106497.1 316931515 10062308 complement(133406..134686) 1 NC_014834.1 PFAM: extracellular solute-binding protein family 1; KEGG: bmr:BMI_II1186 sugar ABC transporter, periplasmic sugar-binding protein, putative; family 1 extracellular solute-binding protein 134686 10062308 Rpdx1_0120 Rhodopseudomonas palustris DX-1 family 1 extracellular solute-binding protein YP_004106497.1 133406 R 652103 CDS YP_004106498.1 316931516 10062309 complement(134709..135545) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmr:BMI_II1187 sugar ABC transporter, permease protein, putative; binding-protein-dependent transporter inner membrane component 135545 10062309 Rpdx1_0121 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106498.1 134709 R 652103 CDS YP_004106499.1 316931517 10062310 complement(135542..136501) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_1668 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 136501 10062310 Rpdx1_0122 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106499.1 135542 R 652103 CDS YP_004106500.1 316931518 10062311 complement(136494..137648) 1 NC_014834.1 KEGG: sil:SPO1823 sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein 137648 10062311 Rpdx1_0123 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004106500.1 136494 R 652103 CDS YP_004106501.1 316931519 10062312 137776..138654 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azl:AZL_a10500 transcriptional regulator; LysR family transcriptional regulator 138654 10062312 Rpdx1_0124 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004106501.1 137776 D 652103 CDS YP_004106502.1 316931520 10062313 complement(138660..139355) 1 NC_014834.1 KEGG: tmz:Tmz1t_1807 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 139355 10062313 Rpdx1_0125 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004106502.1 138660 R 652103 CDS YP_004106503.1 316931521 10062314 complement(139352..140125) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_2682 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 140125 10062314 Rpdx1_0126 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106503.1 139352 R 652103 CDS YP_004106504.1 316931522 10062315 complement(140115..141107) 1 NC_014834.1 KEGG: sth:STH760 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 141107 10062315 Rpdx1_0127 Rhodopseudomonas palustris DX-1 ABC transporter substrate-binding protein YP_004106504.1 140115 R 652103 CDS YP_004106505.1 316931523 10062316 complement(141120..142979) 1 NC_014834.1 KEGG: dvu:DVU1771 [Fe] hydrogenase gamma; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit; hydrogenase, Fe-only 142979 10062316 Rpdx1_0128 Rhodopseudomonas palustris DX-1 hydrogenase, Fe-only YP_004106505.1 141120 R 652103 CDS YP_004106506.1 316931524 10062317 complement(142984..144984) 1 NC_014834.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: dvl:Dvul_1383 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 144984 10062317 Rpdx1_0129 Rhodopseudomonas palustris DX-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004106506.1 142984 R 652103 CDS YP_004106507.1 316931525 10062318 complement(145300..148515) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bbt:BBta_0531 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; response regulator receiver; multi-sensor hybrid histidine kinase 148515 10062318 Rpdx1_0130 Rhodopseudomonas palustris DX-1 multi-sensor hybrid histidine kinase YP_004106507.1 145300 R 652103 CDS YP_004106508.1 316931526 10062319 complement(148834..149139) 1 NC_014834.1 KEGG: bbt:BBta_7548 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; 50S ribosomal protein L28 149139 10062319 Rpdx1_0131 Rhodopseudomonas palustris DX-1 50S ribosomal protein L28 YP_004106508.1 148834 R 652103 CDS YP_004106509.1 316931527 10062320 149444..150319 1 NC_014834.1 KEGG: nha:Nham_0503 hypothetical protein; hypothetical protein 150319 10062320 Rpdx1_0132 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106509.1 149444 D 652103 CDS YP_004106510.1 316931528 10062321 150623..153883 1 NC_014834.1 KEGG: nha:Nham_0504 helicase-like; PFAM: helicase domain protein; SMART: helicase domain protein; helicase domain-containing protein 153883 10062321 Rpdx1_0133 Rhodopseudomonas palustris DX-1 helicase domain-containing protein YP_004106510.1 150623 D 652103 CDS YP_004106511.1 316931529 10062322 153913..154182 1 NC_014834.1 KEGG: nha:Nham_0505 RNA-binding S4; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 154182 10062322 Rpdx1_0134 Rhodopseudomonas palustris DX-1 RNA-binding S4 domain-containing protein YP_004106511.1 153913 D 652103 CDS YP_004106512.1 316931530 10062323 154257..154595 1 NC_014834.1 KEGG: bja:bll0157 ferredoxin; ferredoxin 154595 10062323 Rpdx1_0135 Rhodopseudomonas palustris DX-1 ferredoxin YP_004106512.1 154257 D 652103 CDS YP_004106513.1 316931531 10062324 155110..155904 1 NC_014834.1 PFAM: transcription factor CarD; KEGG: bbt:BBta_7543 CarD family transcriptional regulator; CarD family transcriptional regulator 155904 10062324 Rpdx1_0136 Rhodopseudomonas palustris DX-1 CarD family transcriptional regulator YP_004106513.1 155110 D 652103 CDS YP_004106514.1 316931532 10062325 complement(155987..157444) 1 NC_014834.1 PFAM: peptidase M48 Ste24p; Peptidoglycan-binding lysin domain; KEGG: nha:Nham_0508 peptidase M48, Ste24p; peptidase M48 Ste24p 157444 10062325 Rpdx1_0137 Rhodopseudomonas palustris DX-1 peptidase M48 Ste24p YP_004106514.1 155987 R 652103 CDS YP_004106515.1 316931533 10062326 complement(157515..158306) 1 NC_014834.1 PFAM: nuclease (SNase domain protein); KEGG: nha:Nham_0509 nuclease (SNase-like); nuclease 158306 10062326 Rpdx1_0138 Rhodopseudomonas palustris DX-1 nuclease YP_004106515.1 157515 R 652103 CDS YP_004106516.1 316931534 10062327 158687..159892 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:bll0144 substrate-binding protein; extracellular ligand-binding receptor 159892 10062327 Rpdx1_0139 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004106516.1 158687 D 652103 CDS YP_004106517.1 316931535 10062328 160075..160863 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_7538 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 160863 10062328 Rpdx1_0140 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004106517.1 160075 D 652103 CDS YP_004106518.1 316931536 10062329 160866..161630 1 NC_014834.1 KEGG: bja:bll0142 hypothetical protein; hypothetical protein 161630 10062329 Rpdx1_0141 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106518.1 160866 D 652103 CDS YP_004106519.1 316931537 10062330 complement(161802..162608) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr0140 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 162608 10062330 Rpdx1_0142 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004106519.1 161802 R 652103 CDS YP_004106520.1 316931538 10062331 complement(162641..163801) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr0139 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 163801 10062331 Rpdx1_0143 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004106520.1 162641 R 652103 CDS YP_004106521.1 316931539 10062332 complement(163828..164892) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr0138 hypothetical protein; acyl-CoA dehydrogenase domain-containing protein 164892 10062332 Rpdx1_0144 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004106521.1 163828 R 652103 CDS YP_004106522.1 316931540 10062333 165153..165935 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll0137 oxidoreductase; short-chain dehydrogenase/reductase SDR 165935 10062333 Rpdx1_0145 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004106522.1 165153 D 652103 CDS YP_004106523.1 316931541 10062334 complement(166001..166297) 1 NC_014834.1 KEGG: oca:OCAR_4055 transglycosylase-associated protein; transglycosylase-associated protein 166297 10062334 Rpdx1_0146 Rhodopseudomonas palustris DX-1 transglycosylase-associated protein YP_004106523.1 166001 R 652103 CDS YP_004106524.1 316931542 10062335 complement(166362..166916) 1 NC_014834.1 PFAM: protein of unknown function DUF937; KEGG: nha:Nham_0511 hypothetical protein; hypothetical protein 166916 10062335 Rpdx1_0147 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106524.1 166362 R 652103 CDS YP_004106525.1 316931543 10062336 complement(167050..168381) 1 NC_014834.1 PFAM: Protein of unknown function DUF2134, membrane; KEGG: bbt:BBta_7591 hypothetical protein; hypothetical protein 168381 10062336 Rpdx1_0148 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106525.1 167050 R 652103 CDS YP_004106526.1 316931544 10062338 complement(168795..169796) 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr0103 oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 169796 10062338 Rpdx1_0149 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004106526.1 168795 R 652103 CDS YP_004106527.1 316931545 10062339 complement(169889..170839) 1 NC_014834.1 KEGG: bja:blr0101 hypothetical protein; hypothetical protein 170839 10062339 Rpdx1_0150 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106527.1 169889 R 652103 CDS YP_004106528.1 316931546 10062340 171120..172751 1 NC_014834.1 KEGG: bbt:BBta_7493 glutamate synthase domain-containing protein; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase 172751 10062340 Rpdx1_0151 Rhodopseudomonas palustris DX-1 glutamate synthase YP_004106528.1 171120 D 652103 CDS YP_004106529.1 316931547 10062341 complement(172837..173649) 1 NC_014834.1 PFAM: Creatininase; KEGG: nwi:Nwi_0330 creatininase; creatininase 173649 10062341 Rpdx1_0152 Rhodopseudomonas palustris DX-1 creatininase YP_004106529.1 172837 R 652103 CDS YP_004106530.1 316931548 10062342 173778..174908 1 NC_014834.1 KEGG: nha:Nham_0425 perplasmic binding protein of ABC transporter; perplasmic-binding protein of ABC transporter 174908 10062342 Rpdx1_0153 Rhodopseudomonas palustris DX-1 perplasmic-binding protein of ABC transporter YP_004106530.1 173778 D 652103 CDS YP_004106531.1 316931549 10062343 174917..175747 1 NC_014834.1 KEGG: bbt:BBta_7481 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 175747 10062343 Rpdx1_0154 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004106531.1 174917 D 652103 CDS YP_004106532.1 316931550 10062344 175753..176568 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nha:Nham_0427 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 176568 10062344 Rpdx1_0155 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106532.1 175753 D 652103 CDS YP_004106533.1 316931551 10062345 176568..177554 1 NC_014834.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: nha:Nham_0428 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 177554 10062345 Rpdx1_0156 Rhodopseudomonas palustris DX-1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004106533.1 176568 D 652103 CDS YP_004106534.1 316931552 10062346 177557..178240 1 NC_014834.1 KEGG: nha:Nham_0429 hypothetical protein; hypothetical protein 178240 10062346 Rpdx1_0157 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106534.1 177557 D 652103 CDS YP_004106535.1 316931553 10062347 178385..179818 1 NC_014834.1 PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: rle:RL1126 hypothetical protein; hypothetical protein 179818 10062347 Rpdx1_0158 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106535.1 178385 D 652103 CDS YP_004106536.1 316931554 10062348 complement(179874..181367) 1 NC_014834.1 KEGG: bra:BRADO0028 succinate-semialdehyde dehydrogenase [NADP+] (SSDH); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinate-semialdehyde dehydrogenase 181367 10062348 Rpdx1_0159 Rhodopseudomonas palustris DX-1 succinate-semialdehyde dehydrogenase YP_004106536.1 179874 R 652103 CDS YP_004106537.1 316931555 10062349 complement(181524..181850) 1 NC_014834.1 KEGG: bja:blr0806 hypothetical protein; hypothetical protein 181850 10062349 Rpdx1_0160 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106537.1 181524 R 652103 CDS YP_004106538.1 316931556 10062350 182095..183282 1 NC_014834.1 PFAM: beta-lactamase; KEGG: bja:bll0805 hypothetical protein; beta-lactamase 183282 10062350 Rpdx1_0161 Rhodopseudomonas palustris DX-1 beta-lactamase YP_004106538.1 182095 D 652103 CDS YP_004106539.1 316931557 10062351 183415..185109 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: met:M446_2319 AMP-binding domain protein; AMP-dependent synthetase and ligase 185109 10062351 Rpdx1_0162 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004106539.1 183415 D 652103 CDS YP_004106540.1 316931558 10062352 complement(185270..186271) 1 NC_014834.1 PFAM: PfkB domain protein; KEGG: nha:Nham_0010 PfkB; PfkB domain-containing protein 186271 10062352 Rpdx1_0163 Rhodopseudomonas palustris DX-1 PfkB domain-containing protein YP_004106540.1 185270 R 652103 CDS YP_004106541.1 316931559 10062353 186550..188106 1 NC_014834.1 KEGG: bja:bll0803 putative virulence factor; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN 188106 10062353 Rpdx1_0164 Rhodopseudomonas palustris DX-1 integral membrane protein MviN YP_004106541.1 186550 D 652103 CDS YP_004106542.1 316931560 10062354 188162..189214 1 NC_014834.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: nha:Nham_0012 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 189214 10062354 Rpdx1_0165 Rhodopseudomonas palustris DX-1 tryptophanyl-tRNA synthetase YP_004106542.1 188162 D 652103 CDS YP_004106543.1 316931561 10062355 189425..189919 1 NC_014834.1 KEGG: nwi:Nwi_0008 hypothetical protein; hypothetical protein 189919 10062355 Rpdx1_0166 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106543.1 189425 D 652103 CDS YP_004106544.1 316931562 10062356 190062..190628 1 NC_014834.1 PFAM: Scaffold protein Nfu/NifU ; nitrogen-fixing NifU domain protein; KEGG: bbt:BBta_0040 putative NifU protein; Scaffold protein Nfu/NifU 190628 10062356 Rpdx1_0167 Rhodopseudomonas palustris DX-1 Scaffold protein Nfu/NifU YP_004106544.1 190062 D 652103 CDS YP_004106545.1 316931563 10062357 190764..191459 1 NC_014834.1 PFAM: peptidase M22 glycoprotease; KEGG: nha:Nham_0018 peptidase M22, glycoprotease; peptidase M22 glycoprotease 191459 10062357 Rpdx1_0168 Rhodopseudomonas palustris DX-1 peptidase M22 glycoprotease YP_004106545.1 190764 D 652103 CDS YP_004106546.1 316931564 10062358 191512..191997 1 NC_014834.1 KEGG: bja:bll0798 putative acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase 191997 10062358 Rpdx1_0169 Rhodopseudomonas palustris DX-1 ribosomal-protein-alanine acetyltransferase YP_004106546.1 191512 D 652103 CDS YP_004106547.1 316931565 10062359 192060..192491 1 NC_014834.1 PFAM: ferric-uptake regulator; KEGG: bra:BRADO0039 ferric uptake regulator family protein; Fur family ferric uptake regulator 192491 10062359 Rpdx1_0170 Rhodopseudomonas palustris DX-1 Fur family ferric uptake regulator YP_004106547.1 192060 D 652103 CDS YP_004106548.1 316931566 10062360 192577..193236 1 NC_014834.1 KEGG: bja:bll0796 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 193236 10062360 Rpdx1_0171 Rhodopseudomonas palustris DX-1 HAD-superfamily hydrolase YP_004106548.1 192577 D 652103 CDS YP_004106549.1 316931567 10062361 193354..194745 1 NC_014834.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: bja:bll0795 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB; RNA modification protein, MiaB family 194745 10062361 Rpdx1_0172 Rhodopseudomonas palustris DX-1 RNA modification protein, MiaB family YP_004106549.1 193354 D 652103 CDS YP_004106550.1 316931568 10062362 194752..195810 1 NC_014834.1 KEGG: nha:Nham_0022 PhoH-like protein; PFAM: PhoH family protein; K Homology, type 1, subgroup; SMART: KH domain protein; PhoH family protein 195810 10062362 Rpdx1_0173 Rhodopseudomonas palustris DX-1 PhoH family protein YP_004106550.1 194752 D 652103 CDS YP_004106551.1 316931569 10062363 195878..196381 1 NC_014834.1 PFAM: protein of unknown function UPF0054; KEGG: nha:Nham_0023 hypothetical protein; hypothetical protein 196381 10062363 Rpdx1_0174 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106551.1 195878 D 652103 CDS YP_004106552.1 316931570 10062364 196383..197522 1 NC_014834.1 KEGG: bja:bll0792 magnesium and cobalt efflux protein; PFAM: CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; hypothetical protein 197522 10062364 Rpdx1_0175 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106552.1 196383 D 652103 CDS YP_004106553.1 316931571 10062365 197522..199129 1 NC_014834.1 KEGG: nha:Nham_0025 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 199129 10062365 Rpdx1_0176 Rhodopseudomonas palustris DX-1 apolipoprotein N-acyltransferase YP_004106553.1 197522 D 652103 CDS YP_004106554.1 316931572 10062366 199330..199749 1 NC_014834.1 KEGG: nha:Nham_0026 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 199749 10062366 Rpdx1_0177 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004106554.1 199330 D 652103 CDS YP_004106555.1 316931573 10062367 199837..200652 1 NC_014834.1 PFAM: putative methyltransferase; KEGG: bra:BRADO0048 tRNA (guanine-N(7)-)-methyltransferase; putative methyltransferase 200652 10062367 Rpdx1_0178 Rhodopseudomonas palustris DX-1 putative methyltransferase YP_004106555.1 199837 D 652103 CDS YP_004106556.1 316931574 10062368 complement(200665..201513) 1 NC_014834.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: pla:Plav_0212 phytanoyl-CoA dioxygenase; Phytanoyl-CoA dioxygenase 201513 10062368 Rpdx1_0179 Rhodopseudomonas palustris DX-1 Phytanoyl-CoA dioxygenase YP_004106556.1 200665 R 652103 CDS YP_004106557.1 316931575 10062369 complement(201598..202683) 1 NC_014834.1 PFAM: Protein of unknown function DUF2336; KEGG: oca:OCAR_4513 hypothetical protein; hypothetical protein 202683 10062369 Rpdx1_0180 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106557.1 201598 R 652103 CDS YP_004106558.1 316931576 10062370 203020..203799 1 NC_014834.1 PFAM: protein of unknown function DUF150; KEGG: bbt:BBta_0054 hypothetical protein; hypothetical protein 203799 10062370 Rpdx1_0181 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106558.1 203020 D 652103 CDS YP_004106559.1 316931577 10062371 203802..205415 1 NC_014834.1 KEGG: bja:bll0785 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; transcription termination factor NusA 205415 10062371 Rpdx1_0182 Rhodopseudomonas palustris DX-1 transcription termination factor NusA YP_004106559.1 203802 D 652103 CDS YP_004106560.1 316931578 10062372 205477..206268 1 NC_014834.1 PFAM: protein of unknown function DUF448; KEGG: nwi:Nwi_0023 hypothetical protein; hypothetical protein 206268 10062372 Rpdx1_0183 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106560.1 205477 D 652103 CDS YP_004106561.1 316931579 10062373 206261..208927 1 NC_014834.1 KEGG: bja:bll0783 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein ; elongation factor Tu domain 2 protein; translation initiation factor IF-2 208927 10062373 Rpdx1_0184 Rhodopseudomonas palustris DX-1 translation initiation factor IF-2 YP_004106561.1 206261 D 652103 CDS YP_004106562.1 316931580 10062374 209143..209556 1 NC_014834.1 KEGG: bja:bll0782 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; ribosome-binding factor A 209556 10062374 Rpdx1_0185 Rhodopseudomonas palustris DX-1 ribosome-binding factor A YP_004106562.1 209143 D 652103 CDS YP_004106563.1 316931581 10062375 209556..210653 1 NC_014834.1 KEGG: nwi:Nwi_0026 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B 210653 10062375 Rpdx1_0186 Rhodopseudomonas palustris DX-1 tRNA pseudouridine synthase B YP_004106563.1 209556 D 652103 CDS YP_004106564.1 316931582 10062376 210656..210925 1 NC_014834.1 KEGG: nwi:Nwi_0027 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; 30S ribosomal protein S15 210925 10062376 Rpdx1_0187 Rhodopseudomonas palustris DX-1 30S ribosomal protein S15 YP_004106564.1 210656 D 652103 CDS YP_004106565.1 316931583 10062377 211269..213437 1 NC_014834.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: nwi:Nwi_0028 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; polyribonucleotide nucleotidyltransferase 213437 10062377 Rpdx1_0188 Rhodopseudomonas palustris DX-1 polyribonucleotide nucleotidyltransferase YP_004106565.1 211269 D 652103 CDS YP_004106566.1 316931584 10062378 213645..214379 1 NC_014834.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: oca:OCAR_4502 superoxide dismutase; manganese/iron superoxide dismutase-like protein 214379 10062378 Rpdx1_0189 Rhodopseudomonas palustris DX-1 manganese/iron superoxide dismutase-like protein YP_004106566.1 213645 D 652103 CDS YP_004106567.1 316931585 10062379 214879..216564 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; chemotaxis sensory transducer; KEGG: bbt:BBta_2308 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 216564 10062379 Rpdx1_0190 Rhodopseudomonas palustris DX-1 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_004106567.1 214879 D 652103 CDS YP_004106568.1 316931586 10062380 complement(216574..217512) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nwi:Nwi_0029 regulatory protein, LysR; LysR family transcriptional regulator 217512 10062380 Rpdx1_0191 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004106568.1 216574 R 652103 CDS YP_004106569.1 316931587 10062381 217780..219990 1 NC_014834.1 KEGG: mes:Meso_0626 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI 219990 10062381 Rpdx1_0192 Rhodopseudomonas palustris DX-1 catalase/peroxidase HPI YP_004106569.1 217780 D 652103 CDS YP_004106570.1 316931588 10062383 complement(220592..221467) 1 NC_014834.1 KEGG: azo:azo3831 hypothetical protein; hypothetical protein 221467 10062383 Rpdx1_0194 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106570.1 220592 R 652103 CDS YP_004106571.1 316931589 10062384 221771..222646 1 NC_014834.1 KEGG: nha:Nham_0446 beta-lactamase; PFAM: beta-lactamase; beta-lactamase 222646 10062384 Rpdx1_0195 Rhodopseudomonas palustris DX-1 beta-lactamase YP_004106571.1 221771 D 652103 CDS YP_004106572.1 316931590 10062385 222768..223130 1 NC_014834.1 KEGG: nha:Nham_1339 hypothetical protein; hypothetical protein 223130 10062385 Rpdx1_0196 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106572.1 222768 D 652103 CDS YP_004106573.1 316931591 10062386 complement(223229..224128) 1 NC_014834.1 KEGG: bja:blr7337 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma 32 subunit RpoH 224128 10062386 Rpdx1_0197 Rhodopseudomonas palustris DX-1 RNA polymerase sigma 32 subunit RpoH YP_004106573.1 223229 R 652103 CDS YP_004106574.1 316931592 10062387 complement(224349..225353) 1 NC_014834.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bja:blr7336 pseudouridine synthase-like protein; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 225353 10062387 Rpdx1_0198 Rhodopseudomonas palustris DX-1 RluA family pseudouridine synthase YP_004106574.1 224349 R 652103 CDS YP_004106575.1 316931593 10062388 225392..225727 1 NC_014834.1 KEGG: bja:bll7335 hypothetical protein; hypothetical protein 225727 10062388 Rpdx1_0199 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106575.1 225392 D 652103 CDS YP_004106576.1 316931594 10062390 226108..227979 1 NC_014834.1 KEGG: mea:Mex_1p0058 hypothetical protein; hypothetical protein 227979 10062390 Rpdx1_0200 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106576.1 226108 D 652103 CDS YP_004106577.1 316931595 10062391 228243..228602 1 NC_014834.1 KEGG: bmb:BruAb1_0263 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 228602 10062391 Rpdx1_0201 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004106577.1 228243 D 652103 CDS YP_004106578.1 316931596 10062392 228599..229135 1 NC_014834.1 PFAM: protein of unknown function DUF955; KEGG: bov:BOV_0254 zinc-dependent metallopeptidase; hypothetical protein 229135 10062392 Rpdx1_0202 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106578.1 228599 D 652103 CDS YP_004106579.1 316931597 10062393 229300..229428 1 NC_014834.1 KEGG: rpf:Rpic12D_4679 hypothetical protein; hypothetical protein 229428 10062393 Rpdx1_0203 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106579.1 229300 D 652103 CDS YP_004106580.1 316931598 10062394 complement(229604..230146) 1 NC_014834.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: met:M446_7059 hypothetical protein; resolvase domain-containing protein 230146 10062394 Rpdx1_0204 Rhodopseudomonas palustris DX-1 resolvase domain-containing protein YP_004106580.1 229604 R 652103 CDS YP_004106581.1 316931599 10062395 complement(231121..231399) 1 NC_014834.1 KEGG: sbi:SORBI_01g043300 hypothetical protein; hypothetical protein 231399 10062395 Rpdx1_0205 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106581.1 231121 R 652103 CDS YP_004106582.1 316931600 10062396 231592..231738 1 NC_014834.1 KEGG: scb:SCAB_19301 hypothetical protein; hypothetical protein 231738 10062396 Rpdx1_0206 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106582.1 231592 D 652103 CDS YP_004106583.1 316931601 10062397 complement(232530..235052) 1 NC_014834.1 SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; manually curated; TIGRFAM: diguanylate cyclase; PAS sensor protein; KEGG: tgr:Tgr7_2681 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase 235052 10062397 Rpdx1_0207 Rhodopseudomonas palustris DX-1 PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase YP_004106583.1 232530 R 652103 CDS YP_004106584.1 316931602 10062398 complement(235276..236460) 1 NC_014834.1 KEGG: mgm:Mmc1_0771 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; methionine gamma-lyase 236460 10062398 Rpdx1_0208 Rhodopseudomonas palustris DX-1 methionine gamma-lyase YP_004106584.1 235276 R 652103 CDS YP_004106585.1 316931603 10062399 236569..237054 1 NC_014834.1 KEGG: oan:Oant_0505 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 237054 10062399 Rpdx1_0209 Rhodopseudomonas palustris DX-1 AsnC family transcriptional regulator YP_004106585.1 236569 D 652103 CDS YP_004106586.1 316931604 10062400 complement(237055..237492) 1 NC_014834.1 KEGG: mlo:mll6589 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin 237492 10062400 Rpdx1_0210 Rhodopseudomonas palustris DX-1 thioredoxin YP_004106586.1 237055 R 652103 CDS YP_004106587.1 316931605 10062401 complement(237575..238558) 1 NC_014834.1 KEGG: bja:blr6070 putative alcohol dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; zinc-binding alcohol dehydrogenase family protein 238558 10062401 Rpdx1_0211 Rhodopseudomonas palustris DX-1 zinc-binding alcohol dehydrogenase family protein YP_004106587.1 237575 R 652103 CDS YP_004106588.1 316931606 10062402 complement(238635..238856) 1 NC_014834.1 PFAM: ChaB family protein; KEGG: tcx:Tcr_2071 ChaB; ChaB family protein 238856 10062402 Rpdx1_0212 Rhodopseudomonas palustris DX-1 ChaB family protein YP_004106588.1 238635 R 652103 CDS YP_004106589.1 316931607 10062403 239038..239763 1 NC_014834.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: bja:bll4651 hypothetical protein; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 239763 10062403 Rpdx1_0213 Rhodopseudomonas palustris DX-1 protein-L-isoaspartate O-methyltransferase YP_004106589.1 239038 D 652103 CDS YP_004106590.1 316931608 10062404 239914..240738 1 NC_014834.1 PFAM: UspA domain protein; KEGG: nha:Nham_1926 hypothetical protein; UspA domain-containing protein 240738 10062404 Rpdx1_0214 Rhodopseudomonas palustris DX-1 UspA domain-containing protein YP_004106590.1 239914 D 652103 CDS YP_004106591.1 316931609 10062405 complement(241020..242300) 1 NC_014834.1 PFAM: glycoside hydrolase family 4; KEGG: bra:BRADO2867 putative alpha-galactosidase (melibiase); glycoside hydrolase family protein 242300 10062405 Rpdx1_0215 Rhodopseudomonas palustris DX-1 glycoside hydrolase family protein YP_004106591.1 241020 R 652103 CDS YP_004106592.1 316931610 10062406 242542..243480 1 NC_014834.1 TIGRFAM: 1-phosphofructokinase; KEGG: bbt:BBta_6479 6-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 243480 10062406 Rpdx1_0216 Rhodopseudomonas palustris DX-1 1-phosphofructokinase YP_004106592.1 242542 D 652103 CDS YP_004106593.1 316931611 10062407 243587..245899 1 NC_014834.1 KEGG: bbt:BBta_3664 putative oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; oxidoreductase alpha (molybdopterin) subunit 245899 10062407 Rpdx1_0217 Rhodopseudomonas palustris DX-1 oxidoreductase alpha (molybdopterin) subunit YP_004106593.1 243587 D 652103 CDS YP_004106594.1 316931612 10062408 246168..247430 1 NC_014834.1 KEGG: bra:BRADO6613 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase 247430 10062408 Rpdx1_0218 Rhodopseudomonas palustris DX-1 glucose-1-phosphate adenylyltransferase YP_004106594.1 246168 D 652103 CDS YP_004106595.1 316931613 10062409 247427..248878 1 NC_014834.1 KEGG: msl:Msil_0213 glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; glycogen/starch synthase 248878 10062409 Rpdx1_0219 Rhodopseudomonas palustris DX-1 glycogen/starch synthase YP_004106595.1 247427 D 652103 CDS YP_004106596.1 316931614 10062410 248995..249786 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pzu:PHZ_c3300 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 249786 10062410 Rpdx1_0220 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004106596.1 248995 D 652103 CDS YP_004106597.1 316931615 10062411 complement(249969..250682) 1 NC_014834.1 KEGG: nwi:Nwi_0335 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; DNA repair protein RadC 250682 10062411 Rpdx1_0221 Rhodopseudomonas palustris DX-1 DNA repair protein RadC YP_004106597.1 249969 R 652103 CDS YP_004106598.1 316931616 10062412 complement(250794..251036) 1 NC_014834.1 KEGG: bja:bll5764 hypothetical protein; hypothetical protein 251036 10062412 Rpdx1_0222 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106598.1 250794 R 652103 CDS YP_004106599.1 316931617 10062413 251143..252135 1 NC_014834.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: nha:Nham_0450 hypothetical protein; SMART: Ku domain protein; Ku protein 252135 10062413 Rpdx1_0223 Rhodopseudomonas palustris DX-1 Ku protein YP_004106599.1 251143 D 652103 CDS YP_004106600.1 316931618 10062414 complement(252357..253181) 1 NC_014834.1 KEGG: nha:Nham_0431 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 253181 10062414 Rpdx1_0224 Rhodopseudomonas palustris DX-1 methionine aminopeptidase YP_004106600.1 252357 R 652103 CDS YP_004106601.1 316931619 10062415 253386..255182 1 NC_014834.1 PFAM: sodium/hydrogen exchanger; transporter-associated region; KEGG: nwi:Nwi_0337 potassium/proton antiporter; sodium/hydrogen exchanger 255182 10062415 Rpdx1_0225 Rhodopseudomonas palustris DX-1 sodium/hydrogen exchanger YP_004106601.1 253386 D 652103 CDS YP_004106602.1 316931620 10062416 complement(255204..256166) 1 NC_014834.1 PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: nwi:Nwi_0341 penicillin-insensitive murein endopeptidase; peptidase U6 penicillin-insensitive murein endopeptidase 256166 10062416 Rpdx1_0226 Rhodopseudomonas palustris DX-1 peptidase U6 penicillin-insensitive murein endopeptidase YP_004106602.1 255204 R 652103 CDS YP_004106603.1 316931621 10062417 256532..258769 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bja:bll8156 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase 258769 10062417 Rpdx1_0227 Rhodopseudomonas palustris DX-1 PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase YP_004106603.1 256532 D 652103 CDS YP_004106604.1 316931622 10062418 complement(258794..260551) 1 NC_014834.1 KEGG: rru:Rru_A1289 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; alkaline phosphatase 260551 10062418 Rpdx1_0228 Rhodopseudomonas palustris DX-1 alkaline phosphatase YP_004106604.1 258794 R 652103 CDS YP_004106605.1 316931623 10062419 complement(260661..261620) 1 NC_014834.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: met:M446_5547 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 261620 10062419 Rpdx1_0229 Rhodopseudomonas palustris DX-1 transposase IS116/IS110/IS902 family protein YP_004106605.1 260661 R 652103 CDS YP_004106606.1 316931624 10062420 261985..262728 1 NC_014834.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cak:Caul_4355 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 262728 10062420 Rpdx1_0230 Rhodopseudomonas palustris DX-1 transposase IS116/IS110/IS902 family protein YP_004106606.1 261985 D 652103 CDS YP_004106607.1 316931625 10062421 complement(262796..264133) 1 NC_014834.1 TIGRFAM: argininosuccinate synthase; KEGG: oca:OCAR_4294 argininosuccinate synthase; PFAM: argininosuccinate synthase; argininosuccinate synthase 264133 10062421 Rpdx1_0231 Rhodopseudomonas palustris DX-1 argininosuccinate synthase YP_004106607.1 262796 R 652103 CDS YP_004106608.1 316931626 10062422 complement(264230..265009) 1 NC_014834.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: nwi:Nwi_2804 phosphoesterase, PA-phosphatase related; phosphoesterase PA-phosphatase-like protein 265009 10062422 Rpdx1_0232 Rhodopseudomonas palustris DX-1 phosphoesterase PA-phosphatase-like protein YP_004106608.1 264230 R 652103 CDS YP_004106609.1 316931627 10062423 complement(265006..265506) 1 NC_014834.1 KEGG: bra:BRADO0245 hypothetical protein; hypothetical protein 265506 10062423 Rpdx1_0233 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106609.1 265006 R 652103 CDS YP_004106610.1 316931628 10062424 complement(265506..266099) 1 NC_014834.1 KEGG: bac:BamMC406_4894 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 266099 10062424 Rpdx1_0234 Rhodopseudomonas palustris DX-1 metal dependent phosphohydrolase YP_004106610.1 265506 R 652103 CDS YP_004106611.1 316931629 10062425 complement(266103..267302) 1 NC_014834.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: bbt:BBta_0241 putative pyruvate formate lyase activating enzyme 2 (YfgB); SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 267302 10062425 Rpdx1_0235 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004106611.1 266103 R 652103 CDS YP_004106612.1 316931630 10062426 complement(267485..268039) 1 NC_014834.1 KEGG: nha:Nham_3627 hypothetical protein; hypothetical protein 268039 10062426 Rpdx1_0236 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106612.1 267485 R 652103 CDS YP_004106613.1 316931631 10062427 complement(268213..269049) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll0527 oxidoreductase; short-chain dehydrogenase/reductase SDR 269049 10062427 Rpdx1_0237 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004106613.1 268213 R 652103 CDS YP_004106614.1 316931632 10062428 269281..270255 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_0243 putative quinone oxidoreductase (NADPH) and Zn-dependent alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 270255 10062428 Rpdx1_0238 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004106614.1 269281 D 652103 CDS YP_004106615.1 316931633 10062429 complement(270371..272509) 1 NC_014834.1 KEGG: bbt:BBta_7528 putative phytoene dehydrogenase and related proteins; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; all-trans-retinol 13,14-reductase 272509 10062429 Rpdx1_0239 Rhodopseudomonas palustris DX-1 all-trans-retinol 13,14-reductase YP_004106615.1 270371 R 652103 CDS YP_004106616.1 316931634 10062430 272653..273273 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: ank:AnaeK_2962 transcriptional regulator, TetR family; regulatory protein TetR 273273 10062430 Rpdx1_0240 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004106616.1 272653 D 652103 CDS YP_004106617.1 316931635 10062431 complement(273289..273663) 1 NC_014834.1 PFAM: protein of unknown function DUF1232; KEGG: bja:bll0531 hypothetical protein; hypothetical protein 273663 10062431 Rpdx1_0241 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106617.1 273289 R 652103 CDS YP_004106618.1 316931636 10062432 complement(273743..274048) 1 NC_014834.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: nwi:Nwi_2809 pterin-4-alpha-carbinolamine dehydratase; transcriptional coactivator/pterin dehydratase 274048 10062432 Rpdx1_0242 Rhodopseudomonas palustris DX-1 transcriptional coactivator/pterin dehydratase YP_004106618.1 273743 R 652103 CDS YP_004106619.1 316931637 10062433 274234..275679 1 NC_014834.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:blr0533 hypothetical protein; TAXI family TRAP transporter solute receptor 275679 10062433 Rpdx1_0243 Rhodopseudomonas palustris DX-1 TAXI family TRAP transporter solute receptor YP_004106619.1 274234 D 652103 CDS YP_004106620.1 316931638 10062434 complement(275689..277134) 1 NC_014834.1 KEGG: mpo:Mpop_0228 PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein 277134 10062434 Rpdx1_0244 Rhodopseudomonas palustris DX-1 PepSY-associated TM helix domain-containing protein YP_004106620.1 275689 R 652103 CDS YP_004106621.1 316931639 10062435 complement(277139..279418) 1 NC_014834.1 KEGG: azl:AZL_004810 iron complex outermembrane recepter protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 279418 10062435 Rpdx1_0245 Rhodopseudomonas palustris DX-1 TonB-dependent siderophore receptor YP_004106621.1 277139 R 652103 CDS YP_004106622.1 316931640 10062436 280153..281976 1 NC_014834.1 KEGG: bra:BRADO0265 GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A); TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; GTP-binding protein TypA 281976 10062436 Rpdx1_0246 Rhodopseudomonas palustris DX-1 GTP-binding protein TypA YP_004106622.1 280153 D 652103 CDS YP_004106623.1 316931641 10062437 282083..283351 1 NC_014834.1 PFAM: amine oxidase; KEGG: bja:blr0541 hypothetical protein; amine oxidase 283351 10062437 Rpdx1_0247 Rhodopseudomonas palustris DX-1 amine oxidase YP_004106623.1 282083 D 652103 CDS YP_004106624.1 316931642 10062438 283525..284034 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr0547 hypothetical protein; N-acetyltransferase GCN5 284034 10062438 Rpdx1_0248 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004106624.1 283525 D 652103 CDS YP_004106625.1 316931643 10062439 284113..284649 1 NC_014834.1 KEGG: bja:blr0548 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; inorganic diphosphatase 284649 10062439 Rpdx1_0249 Rhodopseudomonas palustris DX-1 inorganic diphosphatase YP_004106625.1 284113 D 652103 CDS YP_004106626.1 316931644 10062440 284685..286166 1 NC_014834.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bra:BRADO0276 hypothetical protein; peptidase M20 286166 10062440 Rpdx1_0250 Rhodopseudomonas palustris DX-1 peptidase M20 YP_004106626.1 284685 D 652103 CDS YP_004106627.1 316931645 10062441 complement(286341..287228) 1 NC_014834.1 KEGG: nha:Nham_0609 methylenetetrahydrofolate dehydrogenase (NADP+); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase 287228 10062441 Rpdx1_0251 Rhodopseudomonas palustris DX-1 methylenetetrahydrofolate dehydrogenase YP_004106627.1 286341 R 652103 CDS YP_004106628.1 316931646 10062442 complement(287335..287661) 1 NC_014834.1 PFAM: protein of unknown function DUF167; KEGG: nwi:Nwi_0479 hypothetical protein; hypothetical protein 287661 10062442 Rpdx1_0252 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106628.1 287335 R 652103 CDS YP_004106629.1 316931647 10062443 complement(287671..288030) 1 NC_014834.1 KEGG: nwi:Nwi_0478 hypothetical protein; manually curated; PFAM: protein of unknown function YGGT; hypothetical protein 288030 10062443 Rpdx1_0253 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106629.1 287671 R 652103 CDS YP_004106630.1 316931648 10062445 complement(288548..289366) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:bll0552 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 289366 10062445 Rpdx1_0254 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004106630.1 288548 R 652103 CDS YP_004106631.1 316931649 10062446 complement(289441..289941) 1 NC_014834.1 KEGG: vei:Veis_3840 hypothetical protein; hypothetical protein 289941 10062446 Rpdx1_0255 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106631.1 289441 R 652103 CDS YP_004106632.1 316931650 10062447 complement(290093..290902) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nha:Nham_0606 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 290902 10062447 Rpdx1_0256 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004106632.1 290093 R 652103 CDS YP_004106633.1 316931651 10062448 complement(291042..291536) 1 NC_014834.1 KEGG: nha:Nham_0605 hypothetical protein; hypothetical protein 291536 10062448 Rpdx1_0257 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106633.1 291042 R 652103 CDS YP_004106634.1 316931652 10062449 complement(291673..293058) 1 NC_014834.1 PFAM: cytochrome P450; KEGG: bbt:BBta_0276 putative cytochrome P450 hydroxylase superfamily protein; cytochrome P450 293058 10062449 Rpdx1_0258 Rhodopseudomonas palustris DX-1 cytochrome P450 YP_004106634.1 291673 R 652103 CDS YP_004106635.1 316931653 10062450 complement(293178..294179) 1 NC_014834.1 KEGG: bja:bll0766 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; glyoxylate reductase 294179 10062450 Rpdx1_0259 Rhodopseudomonas palustris DX-1 glyoxylate reductase YP_004106635.1 293178 R 652103 CDS YP_004106636.1 316931654 10062451 294414..294938 1 NC_014834.1 PFAM: protein of unknown function DUF1058; KEGG: bja:blr0767 hypothetical protein; hypothetical protein 294938 10062451 Rpdx1_0260 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106636.1 294414 D 652103 CDS YP_004106637.1 316931655 10062452 complement(295046..295537) 1 NC_014834.1 KEGG: oca:OCAR_4496 ferric uptake regulator, FUR family; manually curated; PFAM: ferric-uptake regulator; Fur family ferric uptake regulator 295537 10062452 Rpdx1_0261 Rhodopseudomonas palustris DX-1 Fur family ferric uptake regulator YP_004106637.1 295046 R 652103 CDS YP_004106638.1 316931656 10062453 295796..296323 1 NC_014834.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: nwi:Nwi_0034 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 296323 10062453 Rpdx1_0262 Rhodopseudomonas palustris DX-1 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA YP_004106638.1 295796 D 652103 CDS YP_004106639.1 316931657 10062454 296390..297616 1 NC_014834.1 PFAM: Beta-ketoacyl synthase; KEGG: oca:OCAR_4498 3-oxoacyl-(acyl carrier protein) synthase I; beta-ketoacyl synthase 297616 10062454 Rpdx1_0263 Rhodopseudomonas palustris DX-1 beta-ketoacyl synthase YP_004106639.1 296390 D 652103 CDS YP_004106640.1 316931658 10062455 297791..298603 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr0771 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 298603 10062455 Rpdx1_0264 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004106640.1 297791 D 652103 CDS YP_004106641.1 316931659 10062457 complement(298954..300567) 1 NC_014834.1 KEGG: bbt:BBta_7365 phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase 300567 10062457 Rpdx1_0266 Rhodopseudomonas palustris DX-1 phosphoenolpyruvate carboxykinase YP_004106641.1 298954 R 652103 CDS YP_004106642.1 316931660 10062458 complement(300759..301493) 1 NC_014834.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bja:bll8143 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 301493 10062458 Rpdx1_0267 Rhodopseudomonas palustris DX-1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_004106642.1 300759 R 652103 CDS YP_004106643.1 316931661 10062459 301727..302428 1 NC_014834.1 KEGG: bja:blr8144 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 302428 10062459 Rpdx1_0268 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004106643.1 301727 D 652103 CDS YP_004106644.1 316931662 10062460 302564..304336 1 NC_014834.1 KEGG: nha:Nham_0442 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 304336 10062460 Rpdx1_0269 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004106644.1 302564 D 652103 CDS YP_004106645.1 316931663 10062461 304333..304800 1 NC_014834.1 KEGG: bbt:BBta_7369 HPr kinase; HPr kinase 304800 10062461 Rpdx1_0270 Rhodopseudomonas palustris DX-1 HPr kinase YP_004106645.1 304333 D 652103 CDS YP_004106646.1 316931664 10062462 304988..305389 1 NC_014834.1 PFAM: PTS system fructose subfamily IIA component; KEGG: nha:Nham_0440 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 305389 10062462 Rpdx1_0271 Rhodopseudomonas palustris DX-1 PTS system fructose subfamily transporter subunit IIA YP_004106646.1 304988 D 652103 CDS YP_004106647.1 316931665 10062463 305386..305718 1 NC_014834.1 KEGG: nha:Nham_0439 HPrNtr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr 305718 10062463 Rpdx1_0272 Rhodopseudomonas palustris DX-1 phosphotransferase system, phosphocarrier protein HPr YP_004106647.1 305386 D 652103 CDS YP_004106648.1 316931666 10062464 complement(305726..307264) 1 NC_014834.1 KEGG: bra:BRADO0839 hypothetical protein; hypothetical protein 307264 10062464 Rpdx1_0273 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106648.1 305726 R 652103 CDS YP_004106649.1 316931667 10062465 307409..309220 1 NC_014834.1 KEGG: bbt:BBta_7374 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; GTP-binding protein LepA 309220 10062465 Rpdx1_0274 Rhodopseudomonas palustris DX-1 GTP-binding protein LepA YP_004106649.1 307409 D 652103 CDS YP_004106650.1 316931668 10062466 complement(309227..310048) 1 NC_014834.1 KEGG: ade:Adeh_3444 hypothetical protein; hypothetical protein 310048 10062466 Rpdx1_0275 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106650.1 309227 R 652103 CDS YP_004106651.1 316931669 10062467 complement(310053..310469) 1 NC_014834.1 KEGG: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease Vsr 310469 10062467 Rpdx1_0276 Rhodopseudomonas palustris DX-1 DNA mismatch endonuclease Vsr YP_004106651.1 310053 R 652103 CDS YP_004106652.1 316931670 10062468 complement(310466..311638) 1 NC_014834.1 KEGG: ade:Adeh_3442 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 311638 10062468 Rpdx1_0277 Rhodopseudomonas palustris DX-1 DNA-cytosine methyltransferase YP_004106652.1 310466 R 652103 CDS YP_004106653.1 316931671 10062469 311859..312707 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: mac:MA2691 lipolytic enzyme; alpha/beta hydrolase fold protein 312707 10062469 Rpdx1_0278 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004106653.1 311859 D 652103 CDS YP_004106654.1 316931672 10062470 313060..314892 1 NC_014834.1 KEGG: bpt:Bpet0058 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase; (isocitrate dehydrogenase (NADP(+))) kinase 314892 10062470 Rpdx1_0279 Rhodopseudomonas palustris DX-1 (isocitrate dehydrogenase (NADP(+))) kinase YP_004106654.1 313060 D 652103 CDS YP_004106655.1 316931673 10062471 314982..315725 1 NC_014834.1 KEGG: nwi:Nwi_0060 CysZ-like protein; CysZ-like protein 315725 10062471 Rpdx1_0280 Rhodopseudomonas palustris DX-1 CysZ-like protein YP_004106655.1 314982 D 652103 CDS YP_004106656.1 316931674 10062472 complement(315749..315859) 1 NC_014834.1 hypothetical protein 315859 10062472 Rpdx1_0281 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106656.1 315749 R 652103 CDS YP_004106657.1 316931675 10062473 316350..317321 1 NC_014834.1 KEGG: rce:RC1_2083 magnesium-chelatase 30 kDa subunit; TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; magnesium chelatase accessory protein 317321 10062473 Rpdx1_0282 Rhodopseudomonas palustris DX-1 magnesium chelatase accessory protein YP_004106657.1 316350 D 652103 CDS YP_004106658.1 316931676 10062474 317449..319014 1 NC_014834.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: bja:bll5514 hypothetical protein; peptidase S10 serine carboxypeptidase 319014 10062474 Rpdx1_0283 Rhodopseudomonas palustris DX-1 peptidase S10 serine carboxypeptidase YP_004106658.1 317449 D 652103 CDS YP_004106659.1 316931677 10062475 complement(319141..319923) 1 NC_014834.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: bbt:BBta_0201 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III 319923 10062475 Rpdx1_0284 Rhodopseudomonas palustris DX-1 endonuclease III YP_004106659.1 319141 R 652103 CDS YP_004106660.1 316931678 10062476 319946..320461 1 NC_014834.1 KEGG: nwi:Nwi_0204 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2244, transmembrane; hypothetical protein 320461 10062476 Rpdx1_0285 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106660.1 319946 D 652103 CDS YP_004106661.1 316931679 10062477 320477..321409 1 NC_014834.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll0687 transcriptional regulatory protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 321409 10062477 Rpdx1_0286 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004106661.1 320477 D 652103 CDS YP_004106662.1 316931680 10062478 321496..323010 1 NC_014834.1 TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: mrd:Mrad2831_4623 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; phosphoglycerate mutase 323010 10062478 Rpdx1_0287 Rhodopseudomonas palustris DX-1 phosphoglycerate mutase YP_004106662.1 321496 D 652103 CDS YP_004106663.1 316931681 10062479 complement(323088..323903) 1 NC_014834.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: nha:Nham_0158 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 323903 10062479 Rpdx1_0288 Rhodopseudomonas palustris DX-1 dihydrodipicolinate reductase YP_004106663.1 323088 R 652103 CDS YP_004106664.1 316931682 10062480 complement(324000..324308) 1 NC_014834.1 PFAM: protein of unknown function DUF1330; KEGG: bra:BRADO0159 hypothetical protein; hypothetical protein 324308 10062480 Rpdx1_0289 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106664.1 324000 R 652103 CDS YP_004106665.1 316931683 10062481 complement(324334..325047) 1 NC_014834.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: bja:blr0683 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 325047 10062481 Rpdx1_0290 Rhodopseudomonas palustris DX-1 orotidine 5'-phosphate decarboxylase YP_004106665.1 324334 R 652103 CDS YP_004106666.1 316931684 10062482 complement(325044..325637) 1 NC_014834.1 PFAM: NADPH-dependent FMN reductase; KEGG: bja:blr0682 putative oxidoreductase; NADPH-dependent FMN reductase 325637 10062482 Rpdx1_0291 Rhodopseudomonas palustris DX-1 NADPH-dependent FMN reductase YP_004106666.1 325044 R 652103 CDS YP_004106667.1 316931685 10062483 complement(325747..326352) 1 NC_014834.1 KEGG: bbt:BBta_0193 phospholipid N-methyltransferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; ribosomal RNA adenine methylase transferase 326352 10062483 Rpdx1_0292 Rhodopseudomonas palustris DX-1 ribosomal RNA adenine methylase transferase YP_004106667.1 325747 R 652103 CDS YP_004106668.1 316931686 10062484 complement(326446..327585) 1 NC_014834.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: nha:Nham_0156 chaperone DnaJ; SMART: heat shock protein DnaJ domain protein; chaperone protein DnaJ 327585 10062484 Rpdx1_0293 Rhodopseudomonas palustris DX-1 chaperone protein DnaJ YP_004106668.1 326446 R 652103 CDS YP_004106669.1 316931687 10062485 complement(327800..329695) 1 NC_014834.1 KEGG: bbt:BBta_0191 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK 329695 10062485 Rpdx1_0294 Rhodopseudomonas palustris DX-1 chaperone protein DnaK YP_004106669.1 327800 R 652103 CDS YP_004106670.1 316931688 10062486 330028..330969 1 NC_014834.1 KEGG: bja:bll0679 hypothetical protein; hypothetical protein 330969 10062486 Rpdx1_0295 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106670.1 330028 D 652103 CDS YP_004106671.1 316931689 10062487 complement(331076..331699) 1 NC_014834.1 PFAM: GrpE protein; KEGG: bbt:BBta_0188 protein GrpE (HSP-70 cofactor); GrpE protein HSP-70 cofactor 331699 10062487 Rpdx1_0296 Rhodopseudomonas palustris DX-1 GrpE protein HSP-70 cofactor YP_004106671.1 331076 R 652103 CDS YP_004106672.1 316931690 10062488 complement(331790..332878) 1 NC_014834.1 KEGG: nha:Nham_0152 heat-inducible transcription repressor; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like; heat-inducible transcription repressor HrcA 332878 10062488 Rpdx1_0297 Rhodopseudomonas palustris DX-1 heat-inducible transcription repressor HrcA YP_004106672.1 331790 R 652103 CDS YP_004106673.1 316931691 10062489 333033..333746 1 NC_014834.1 TIGRFAM: ribonuclease PH; KEGG: nha:Nham_0151 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 333746 10062489 Rpdx1_0298 Rhodopseudomonas palustris DX-1 ribonuclease PH YP_004106673.1 333033 D 652103 CDS YP_004106674.1 316931692 10062490 333798..334430 1 NC_014834.1 KEGG: bbt:BBta_0185 putative deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 334430 10062490 Rpdx1_0299 Rhodopseudomonas palustris DX-1 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_004106674.1 333798 D 652103 CDS YP_004106675.1 316931693 10062491 334420..335577 1 NC_014834.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: bra:BRADO0175 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 335577 10062491 Rpdx1_0300 Rhodopseudomonas palustris DX-1 oxygen-independent coproporphyrinogen III oxidase YP_004106675.1 334420 D 652103 CDS YP_004106676.1 316931694 10062492 complement(335646..336845) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: nha:Nham_0148 extracellular ligand-binding receptor; extracellular ligand-binding receptor 336845 10062492 Rpdx1_0301 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004106676.1 335646 R 652103 CDS YP_004106677.1 316931695 10062493 337067..338017 1 NC_014834.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bja:bll0670 hypothetical protein; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 338017 10062493 Rpdx1_0302 Rhodopseudomonas palustris DX-1 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004106677.1 337067 D 652103 CDS YP_004106678.1 316931696 10062494 338010..338402 1 NC_014834.1 PFAM: protein of unknown function UPF0102; KEGG: bra:BRADO0179 hypothetical protein; hypothetical protein 338402 10062494 Rpdx1_0303 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106678.1 338010 D 652103 CDS YP_004106679.1 316931697 10062495 338472..339413 1 NC_014834.1 TIGRFAM: glutathione synthetase; KEGG: nha:Nham_0145 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein; glutathione synthetase 339413 10062495 Rpdx1_0304 Rhodopseudomonas palustris DX-1 glutathione synthetase YP_004106679.1 338472 D 652103 CDS YP_004106680.1 316931698 10062496 339651..340382 1 NC_014834.1 KEGG: bbt:BBta_7112 LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 340382 10062496 Rpdx1_0305 Rhodopseudomonas palustris DX-1 LuxR family transcriptional regulator YP_004106680.1 339651 D 652103 CDS YP_004106681.1 316931699 10062497 340468..341124 1 NC_014834.1 PFAM: autoinducer synthesis protein; KEGG: bra:BRADO0941 putative autoinducer (acylhomoserine lactone) synthase; autoinducer synthesis protein 341124 10062497 Rpdx1_0306 Rhodopseudomonas palustris DX-1 autoinducer synthesis protein YP_004106681.1 340468 D 652103 CDS YP_004106682.1 316931700 10062498 341121..341354 1 NC_014834.1 KEGG: smt:Smal_0037 TonB-dependent receptor; hypothetical protein 341354 10062498 Rpdx1_0307 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106682.1 341121 D 652103 CDS YP_004106683.1 316931701 10062499 341451..342989 1 NC_014834.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: bja:bll0661 hypothetical protein; SMART: AAA ATPase; Mg chelatase subunit ChlI 342989 10062499 Rpdx1_0308 Rhodopseudomonas palustris DX-1 Mg chelatase subunit ChlI YP_004106683.1 341451 D 652103 CDS YP_004106684.1 316931702 10062500 343125..345047 1 NC_014834.1 KEGG: nha:Nham_0129 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; integral membrane sensor hybrid histidine kinase 345047 10062500 Rpdx1_0309 Rhodopseudomonas palustris DX-1 integral membrane sensor hybrid histidine kinase YP_004106684.1 343125 D 652103 CDS YP_004106685.1 316931703 10062501 345207..346160 1 NC_014834.1 KEGG: oca:OCAR_4402 hypothetical protein; hypothetical protein 346160 10062501 Rpdx1_0310 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106685.1 345207 D 652103 CDS YP_004106686.1 316931704 10062502 complement(346293..347249) 1 NC_014834.1 TIGRFAM: pantothenate kinase; KEGG: nha:Nham_0128 pantothenate kinase; pantothenate kinase 347249 10062502 Rpdx1_0311 Rhodopseudomonas palustris DX-1 pantothenate kinase YP_004106686.1 346293 R 652103 CDS YP_004106687.1 316931705 10062503 complement(347329..347652) 1 NC_014834.1 KEGG: bja:blr0655 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-ATP diphosphatase 347652 10062503 Rpdx1_0312 Rhodopseudomonas palustris DX-1 phosphoribosyl-ATP diphosphatase YP_004106687.1 347329 R 652103 CDS YP_004106688.1 316931706 10062504 complement(347706..348473) 1 NC_014834.1 KEGG: nha:Nham_0126 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; Imidazole glycerol phosphate synthase cyclase subunit 348473 10062504 Rpdx1_0313 Rhodopseudomonas palustris DX-1 Imidazole glycerol phosphate synthase cyclase subunit YP_004106688.1 347706 R 652103 CDS YP_004106689.1 316931707 10062505 complement(348484..349221) 1 NC_014834.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: bbt:BBta_0145 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 349221 10062505 Rpdx1_0314 Rhodopseudomonas palustris DX-1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_004106689.1 348484 R 652103 CDS YP_004106690.1 316931708 10062506 complement(349218..349517) 1 NC_014834.1 KEGG: cac:CAC1202 hypothetical protein; hypothetical protein 349517 10062506 Rpdx1_0315 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106690.1 349218 R 652103 CDS YP_004106691.1 316931709 10062507 complement(349519..350169) 1 NC_014834.1 KEGG: bbt:BBta_0146 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 350169 10062507 Rpdx1_0316 Rhodopseudomonas palustris DX-1 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_004106691.1 349519 R 652103 CDS YP_004106692.1 316931710 10062508 complement(350166..350687) 1 NC_014834.1 KEGG: nwi:Nwi_0125 hypothetical protein; hypothetical protein 350687 10062508 Rpdx1_0317 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106692.1 350166 R 652103 CDS YP_004106693.1 316931711 10062509 complement(350715..351308) 1 NC_014834.1 KEGG: bja:blr0650 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 351308 10062509 Rpdx1_0318 Rhodopseudomonas palustris DX-1 imidazoleglycerol-phosphate dehydratase YP_004106693.1 350715 R 652103 CDS YP_004106694.1 316931712 10062510 351496..352059 1 NC_014834.1 PFAM: 20S proteasome A and B subunits; KEGG: nha:Nham_0121 ATP-dependent protease peptidase subunit; 20S proteasome subunits A/B 352059 10062510 Rpdx1_0319 Rhodopseudomonas palustris DX-1 20S proteasome subunits A/B YP_004106694.1 351496 D 652103 CDS YP_004106695.1 316931713 10062511 352211..353512 1 NC_014834.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: nwi:Nwi_0129 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase; heat shock protein HslVU, ATPase subunit HslU 353512 10062511 Rpdx1_0320 Rhodopseudomonas palustris DX-1 heat shock protein HslVU, ATPase subunit HslU YP_004106695.1 352211 D 652103 CDS YP_004106696.1 316931714 10062512 complement(353876..354454) 1 NC_014834.1 KEGG: bra:BRADO0206 putative Smr protein/MutS2 C-terminal; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; Smr protein/MutS2 354454 10062512 Rpdx1_0321 Rhodopseudomonas palustris DX-1 Smr protein/MutS2 YP_004106696.1 353876 R 652103 CDS YP_004106697.1 316931715 10062513 complement(354460..355887) 1 NC_014834.1 PFAM: MltA domain protein; 3D domain protein; KEGG: nha:Nham_0118 MltA; MltA domain-containing protein 355887 10062513 Rpdx1_0322 Rhodopseudomonas palustris DX-1 MltA domain-containing protein YP_004106697.1 354460 R 652103 CDS YP_004106698.1 316931716 10062514 complement(355925..356701) 1 NC_014834.1 KEGG: bja:blr0642 hypothetical protein; manually curated; PFAM: import inner membrane translocase subunit Tim44; import inner membrane translocase subunit Tim44 356701 10062514 Rpdx1_0323 Rhodopseudomonas palustris DX-1 import inner membrane translocase subunit Tim44 YP_004106698.1 355925 R 652103 CDS YP_004106699.1 316931717 10062515 357093..357566 1 NC_014834.1 KEGG: nwi:Nwi_0106 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; protein-export protein SecB 357566 10062515 Rpdx1_0324 Rhodopseudomonas palustris DX-1 protein-export protein SecB YP_004106699.1 357093 D 652103 CDS YP_004106700.1 316931718 10062516 complement(357646..358344) 1 NC_014834.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: bja:blr0640 DNA polymerase III epsilon chain; PFAM: Exonuclease RNase T and DNA polymerase III; DNA polymerase III subunit epsilon 358344 10062516 Rpdx1_0325 Rhodopseudomonas palustris DX-1 DNA polymerase III subunit epsilon YP_004106700.1 357646 R 652103 CDS YP_004106701.1 316931719 10062517 complement(358384..358983) 1 NC_014834.1 TIGRFAM: dephospho-CoA kinase; KEGG: nha:Nham_0114 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 358983 10062517 Rpdx1_0326 Rhodopseudomonas palustris DX-1 dephospho-CoA kinase YP_004106701.1 358384 R 652103 CDS YP_004106702.1 316931720 10062518 complement(359074..359682) 1 NC_014834.1 PFAM: Maf family protein; KEGG: bja:blr0638 Maf-like protein; Maf family protein 359682 10062518 Rpdx1_0327 Rhodopseudomonas palustris DX-1 Maf family protein YP_004106702.1 359074 R 652103 CDS YP_004106703.1 316931721 10062519 complement(359679..360518) 1 NC_014834.1 PFAM: protein of unknown function DUF299; KEGG: bbt:BBta_0161 hypothetical protein; hypothetical protein 360518 10062519 Rpdx1_0328 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106703.1 359679 R 652103 CDS YP_004106704.1 316931722 10062520 360972..361412 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: bbt:BBta_0162 hypothetical protein; hypothetical protein 361412 10062520 Rpdx1_0329 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106704.1 360972 D 652103 CDS YP_004106705.1 316931723 10062521 361675..362940 1 NC_014834.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: nwi:Nwi_0100 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho 362940 10062521 Rpdx1_0330 Rhodopseudomonas palustris DX-1 transcription termination factor Rho YP_004106705.1 361675 D 652103 CDS YP_004106706.1 316931724 10062522 363031..364359 1 NC_014834.1 SMART: AAA ATPase; manually curated; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; KEGG: bja:bll0634 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; tRNA modification GTPase TrmE 364359 10062522 Rpdx1_0331 Rhodopseudomonas palustris DX-1 tRNA modification GTPase TrmE YP_004106706.1 363031 D 652103 CDS YP_004106707.1 316931725 10062523 364640..366508 1 NC_014834.1 KEGG: nwi:Nwi_0097 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; glucose inhibited division protein A 366508 10062523 Rpdx1_0332 Rhodopseudomonas palustris DX-1 glucose inhibited division protein A YP_004106707.1 364640 D 652103 CDS YP_004106708.1 316931726 10062524 366677..367348 1 NC_014834.1 KEGG: bbt:BBta_0166 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB 367348 10062524 Rpdx1_0333 Rhodopseudomonas palustris DX-1 methyltransferase GidB YP_004106708.1 366677 D 652103 CDS YP_004106709.1 316931727 10062525 367375..368229 1 NC_014834.1 KEGG: nha:Nham_0103 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 368229 10062525 Rpdx1_0334 Rhodopseudomonas palustris DX-1 cobyrinic acid a,c-diamide synthase YP_004106709.1 367375 D 652103 CDS YP_004106710.1 316931728 10062526 368401..369291 1 NC_014834.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: nwi:Nwi_0094 ParB-like partition protein; SMART: ParB domain protein nuclease; parB-like partition protein 369291 10062526 Rpdx1_0335 Rhodopseudomonas palustris DX-1 parB-like partition protein YP_004106710.1 368401 D 652103 CDS YP_004106711.1 316931729 10062527 369766..370767 1 NC_014834.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sme:SM_b20636 putative transposase of insertion sequence ISRm19 protein; transposase IS116/IS110/IS902 family protein 370767 10062527 Rpdx1_0336 Rhodopseudomonas palustris DX-1 transposase IS116/IS110/IS902 family protein YP_004106711.1 369766 D 652103 CDS YP_004106712.1 316931730 10062528 complement(370834..371865) 1 NC_014834.1 KEGG: bja:blr0629 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 371865 10062528 Rpdx1_0337 Rhodopseudomonas palustris DX-1 DNA polymerase III subunit delta YP_004106712.1 370834 R 652103 CDS YP_004106713.1 316931731 10062529 complement(371922..372485) 1 NC_014834.1 PFAM: Protein of unknown function DUF2159, secreted; KEGG: nha:Nham_0099 hypothetical protein; hypothetical protein 372485 10062529 Rpdx1_0338 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106713.1 371922 R 652103 CDS YP_004106714.1 316931732 10062530 complement(372472..375102) 1 NC_014834.1 KEGG: bbt:BBta_0171 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; leucyl-tRNA synthetase 375102 10062530 Rpdx1_0339 Rhodopseudomonas palustris DX-1 leucyl-tRNA synthetase YP_004106714.1 372472 R 652103 CDS YP_004106715.1 316931733 10062531 complement(375307..376980) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: bja:blr0624 hypothetical protein; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; diguanylate cyclase 376980 10062531 Rpdx1_0340 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004106715.1 375307 R 652103 CDS YP_004106716.1 316931734 10062532 377149..377808 1 NC_014834.1 PFAM: alanine racemase domain protein; KEGG: bra:BRADO0186 putative signal peptide; alanine racemase domain-containing protein 377808 10062532 Rpdx1_0341 Rhodopseudomonas palustris DX-1 alanine racemase domain-containing protein YP_004106716.1 377149 D 652103 CDS YP_004106717.1 316931735 10062533 complement(377822..378391) 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_0095 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 378391 10062533 Rpdx1_0342 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004106717.1 377822 R 652103 CDS YP_004106718.1 316931736 10062534 378558..379244 1 NC_014834.1 KEGG: bja:bll0620 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 379244 10062534 Rpdx1_0343 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004106718.1 378558 D 652103 CDS YP_004106719.1 316931737 10062535 379284..379733 1 NC_014834.1 KEGG: bja:bll0619 hypothetical protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; putative Crp/Fnr family transcriptional regulator 379733 10062535 Rpdx1_0344 Rhodopseudomonas palustris DX-1 putative Crp/Fnr family transcriptional regulator YP_004106719.1 379284 D 652103 CDS YP_004106720.1 316931738 10062536 complement(379734..380546) 1 NC_014834.1 KEGG: bra:BRADO0181 putative exodeoxyribonuclease III (XthA); TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 380546 10062536 Rpdx1_0345 Rhodopseudomonas palustris DX-1 exodeoxyribonuclease III Xth YP_004106720.1 379734 R 652103 CDS YP_004106721.1 316931739 10062537 complement(380599..381195) 1 NC_014834.1 PFAM: Methyltransferase type 12; KEGG: msl:Msil_3873 methyltransferase type 12; type 12 methyltransferase 381195 10062537 Rpdx1_0346 Rhodopseudomonas palustris DX-1 type 12 methyltransferase YP_004106721.1 380599 R 652103 CDS YP_004106722.1 316931740 10062538 complement(381207..382148) 1 NC_014834.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: bra:BRADO0223 putative signal peptide; outer membrane lipoprotein carrier protein LolA 382148 10062538 Rpdx1_0347 Rhodopseudomonas palustris DX-1 outer membrane lipoprotein carrier protein LolA YP_004106722.1 381207 R 652103 CDS YP_004106723.1 316931741 10062539 complement(382163..384637) 1 NC_014834.1 KEGG: bja:blr0616 cell division protein; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; cell division protein FtsK 384637 10062539 Rpdx1_0348 Rhodopseudomonas palustris DX-1 cell division protein FtsK YP_004106723.1 382163 R 652103 CDS YP_004106724.1 316931742 10062540 complement(384651..385877) 1 NC_014834.1 PFAM: aminotransferase class I and II; KEGG: nha:Nham_0089 aminotransferase, class I and II; class I/II aminotransferase 385877 10062540 Rpdx1_0349 Rhodopseudomonas palustris DX-1 class I/II aminotransferase YP_004106724.1 384651 R 652103 CDS YP_004106725.1 316931743 10062541 complement(386014..386358) 1 NC_014834.1 PFAM: protein of unknown function DUF86; KEGG: mrd:Mrad2831_3537 hypothetical protein; hypothetical protein 386358 10062541 Rpdx1_0350 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106725.1 386014 R 652103 CDS YP_004106726.1 316931744 10062542 complement(386348..386773) 1 NC_014834.1 PFAM: DNA polymerase beta domain protein region; KEGG: cak:Caul_1178 DNA polymerase beta subunit; DNA polymerase beta domain-containing protein 386773 10062542 Rpdx1_0351 Rhodopseudomonas palustris DX-1 DNA polymerase beta domain-containing protein YP_004106726.1 386348 R 652103 CDS YP_004106727.1 316931745 10062544 complement(388330..389772) 1 NC_014834.1 KEGG: bja:blr0613 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter; ammonium transporter 389772 10062544 Rpdx1_0353 Rhodopseudomonas palustris DX-1 ammonium transporter YP_004106727.1 388330 R 652103 CDS YP_004106728.1 316931746 10062545 complement(389810..390148) 1 NC_014834.1 PFAM: nitrogen regulatory protein P-II; KEGG: bja:blr0612 nitrogen regulatory protein PII; nitrogen regulatory protein P-II 390148 10062545 Rpdx1_0354 Rhodopseudomonas palustris DX-1 nitrogen regulatory protein P-II YP_004106728.1 389810 R 652103 CDS YP_004106729.1 316931747 10062546 complement(390490..390828) 1 NC_014834.1 PFAM: nitrogen regulatory protein P-II; KEGG: bbt:BBta_0295 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 390828 10062546 Rpdx1_0355 Rhodopseudomonas palustris DX-1 nitrogen regulatory protein P-II YP_004106729.1 390490 R 652103 CDS YP_004106730.1 316931748 10062547 complement(390967..391842) 1 NC_014834.1 KEGG: bbt:BBta_0297 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 391842 10062547 Rpdx1_0356 Rhodopseudomonas palustris DX-1 acyl-CoA thioesterase II YP_004106730.1 390967 R 652103 CDS YP_004106731.1 316931749 10062548 391974..393194 1 NC_014834.1 KEGG: nwi:Nwi_0079 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; Ubiquinone biosynthesis hydroxylase 393194 10062548 Rpdx1_0357 Rhodopseudomonas palustris DX-1 Ubiquinone biosynthesis hydroxylase YP_004106731.1 391974 D 652103 CDS YP_004106732.1 316931750 10062549 complement(393325..393522) 1 NC_014834.1 PFAM: protein of unknown function DUF343; KEGG: nha:Nham_0083 hypothetical protein; hypothetical protein 393522 10062549 Rpdx1_0358 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106732.1 393325 R 652103 CDS YP_004106733.1 316931751 10062550 complement(393610..394287) 1 NC_014834.1 KEGG: bja:blr0595 hypothetical protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; peptidase S16 lon domain-containing protein 394287 10062550 Rpdx1_0359 Rhodopseudomonas palustris DX-1 peptidase S16 lon domain-containing protein YP_004106733.1 393610 R 652103 CDS YP_004106734.1 316931752 10062551 complement(394315..395235) 1 NC_014834.1 KEGG: bra:BRADO0321 putative thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; thioredoxin 395235 10062551 Rpdx1_0360 Rhodopseudomonas palustris DX-1 thioredoxin YP_004106734.1 394315 R 652103 CDS YP_004106735.1 316931753 10062553 395866..397278 1 NC_014834.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: azl:AZL_019970 membrane bound O-acyl transferase; membrane bound O-acyl transferase 397278 10062553 Rpdx1_0361 Rhodopseudomonas palustris DX-1 membrane bound O-acyl transferase YP_004106735.1 395866 D 652103 CDS YP_004106736.1 316931754 10062554 397281..398450 1 NC_014834.1 KEGG: bav:BAV2623 cellulose acetylase subunit; hypothetical protein 398450 10062554 Rpdx1_0362 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106736.1 397281 D 652103 CDS YP_004106737.1 316931755 10062555 complement(398579..399415) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: msl:Msil_2835 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 399415 10062555 Rpdx1_0363 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106737.1 398579 R 652103 CDS YP_004106738.1 316931756 10062556 complement(399412..400650) 1 NC_014834.1 KEGG: msl:Msil_2834 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 400650 10062556 Rpdx1_0364 Rhodopseudomonas palustris DX-1 twin-arginine translocation pathway signal YP_004106738.1 399412 R 652103 CDS YP_004106739.1 316931757 10062557 complement(400664..401536) 1 NC_014834.1 KEGG: msl:Msil_2833 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 401536 10062557 Rpdx1_0365 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004106739.1 400664 R 652103 CDS YP_004106740.1 316931758 10062558 complement(401616..402497) 1 NC_014834.1 KEGG: bra:BRADO2770 putative thiosulfate sulfurtransferase (rhodanese-like protein); PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 402497 10062558 Rpdx1_0366 Rhodopseudomonas palustris DX-1 rhodanese domain-containing protein YP_004106740.1 401616 R 652103 CDS YP_004106741.1 316931759 10062559 complement(402625..403755) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mno:Mnod_1706 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 403755 10062559 Rpdx1_0367 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004106741.1 402625 R 652103 CDS YP_004106742.1 316931760 10062560 complement(403790..404362) 1 NC_014834.1 PFAM: OsmC family protein; KEGG: xau:Xaut_2612 OsmC family protein; OsmC family protein 404362 10062560 Rpdx1_0368 Rhodopseudomonas palustris DX-1 OsmC family protein YP_004106742.1 403790 R 652103 CDS YP_004106743.1 316931761 10062561 404621..405229 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bja:blr5739 transcriptional regulatory protein; regulatory protein TetR 405229 10062561 Rpdx1_0369 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004106743.1 404621 D 652103 CDS YP_004106744.1 316931762 10062562 complement(405234..407195) 1 NC_014834.1 PFAM: acyltransferase 3; KEGG: oca:OCAR_5879 acyltransferase 3; acyltransferase 3 407195 10062562 Rpdx1_0370 Rhodopseudomonas palustris DX-1 acyltransferase 3 YP_004106744.1 405234 R 652103 CDS YP_004106745.1 316931763 10062563 407419..407847 1 NC_014834.1 PFAM: protein of unknown function UPF0047; KEGG: cts:Ctha_1708 protein of unknown function UPF0047; hypothetical protein 407847 10062563 Rpdx1_0371 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106745.1 407419 D 652103 CDS YP_004106746.1 316931764 10062564 407852..409150 1 NC_014834.1 KEGG: alv:Alvin_2545 ribulose-bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; RuBisCO-like protein 409150 10062564 Rpdx1_0372 Rhodopseudomonas palustris DX-1 RuBisCO-like protein YP_004106746.1 407852 D 652103 CDS YP_004106747.1 316931765 10062565 complement(409179..410264) 1 NC_014834.1 KEGG: nwi:Nwi_2399 hypothetical protein; hypothetical protein 410264 10062565 Rpdx1_0373 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106747.1 409179 R 652103 CDS YP_004106748.1 316931766 10062566 complement(410438..411229) 1 NC_014834.1 manually curated; KEGG: rce:RC1_2117 coenzyme B12-binding aerobic repressor; hypothetical protein 411229 10062566 Rpdx1_0374 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106748.1 410438 R 652103 CDS YP_004106749.1 316931767 10062567 412079..412861 1 NC_014834.1 KEGG: avi:Avi_4013 methyl-accepting chemotaxis protein; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; histidine kinase HAMP region domain-containing protein 412861 10062567 Rpdx1_0375 Rhodopseudomonas palustris DX-1 histidine kinase HAMP region domain-containing protein YP_004106749.1 412079 D 652103 CDS YP_004106750.1 316931768 10062569 complement(413624..415321) 1 NC_014834.1 PFAM: HemY domain protein; KEGG: bja:bll0564 hypothetical protein; HemY domain-containing protein 415321 10062569 Rpdx1_0376 Rhodopseudomonas palustris DX-1 HemY domain-containing protein YP_004106750.1 413624 R 652103 CDS YP_004106751.1 316931769 10062570 complement(415330..416745) 1 NC_014834.1 KEGG: nha:Nham_0564 hypothetical protein; hypothetical protein 416745 10062570 Rpdx1_0377 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106751.1 415330 R 652103 CDS YP_004106752.1 316931770 10062571 complement(416797..417543) 1 NC_014834.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: bja:bll0566 uroporphyrinogen III synthase; uroporphyrinogen III synthase HEM4 417543 10062571 Rpdx1_0378 Rhodopseudomonas palustris DX-1 uroporphyrinogen III synthase HEM4 YP_004106752.1 416797 R 652103 CDS YP_004106753.1 316931771 10062572 417783..418874 1 NC_014834.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: nwi:Nwi_0470 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 418874 10062572 Rpdx1_0379 Rhodopseudomonas palustris DX-1 glycoprotease family metalloendopeptidase YP_004106753.1 417783 D 652103 CDS YP_004106754.1 316931772 10062573 418911..419900 1 NC_014834.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bbt:BBta_0290 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 419900 10062573 Rpdx1_0380 Rhodopseudomonas palustris DX-1 NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein YP_004106754.1 418911 D 652103 CDS YP_004106755.1 316931773 10062574 419903..420316 1 NC_014834.1 PFAM: protein of unknown function DUF55; KEGG: bja:blr0569 hypothetical protein; hypothetical protein 420316 10062574 Rpdx1_0381 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106755.1 419903 D 652103 CDS YP_004106756.1 316931774 10062575 420495..421157 1 NC_014834.1 KEGG: xau:Xaut_1107 hypothetical protein; hypothetical protein 421157 10062575 Rpdx1_0382 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106756.1 420495 D 652103 CDS YP_004106757.1 316931775 10062576 complement(421167..422438) 1 NC_014834.1 TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; KEGG: bra:BRADO0384 putative MiaB-like tRNA modifying enzyme; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein 422438 10062576 Rpdx1_0383 Rhodopseudomonas palustris DX-1 MiaB-like tRNA modifying protein YP_004106757.1 421167 R 652103 CDS YP_004106758.1 316931776 10062577 complement(422438..423319) 1 NC_014834.1 KEGG: nwi:Nwi_2776 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase 423319 10062577 Rpdx1_0384 Rhodopseudomonas palustris DX-1 diaminopimelate epimerase YP_004106758.1 422438 R 652103 CDS YP_004106759.1 316931777 10062578 423556..424350 1 NC_014834.1 PFAM: transcription activator effector binding; KEGG: bja:blr0478 hypothetical protein; transcription activator effector-binding protein 424350 10062578 Rpdx1_0385 Rhodopseudomonas palustris DX-1 transcription activator effector-binding protein YP_004106759.1 423556 D 652103 CDS YP_004106760.1 316931778 10062579 424347..425042 1 NC_014834.1 PFAM: protein of unknown function DUF541; KEGG: nha:Nham_3577 hypothetical protein; hypothetical protein 425042 10062579 Rpdx1_0386 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106760.1 424347 D 652103 CDS YP_004106761.1 316931779 10062580 complement(425052..426026) 1 NC_014834.1 KEGG: bra:BRADO0380 putative metallo-hydrolase/oxidoreductase; putative metallo-hydrolase/oxidoreductase 426026 10062580 Rpdx1_0387 Rhodopseudomonas palustris DX-1 putative metallo-hydrolase/oxidoreductase YP_004106761.1 425052 R 652103 CDS YP_004106762.1 316931780 10062581 complement(426118..426522) 1 NC_014834.1 PFAM: PilT protein domain protein; KEGG: sus:Acid_1772 PilT protein; PilT domain-containing protein 426522 10062581 Rpdx1_0388 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004106762.1 426118 R 652103 CDS YP_004106763.1 316931781 10062582 complement(426525..426770) 1 NC_014834.1 TIGRFAM: prevent-host-death family protein; KEGG: sus:Acid_1771 prevent-host-death family protein; prevent-host-death family protein 426770 10062582 Rpdx1_0389 Rhodopseudomonas palustris DX-1 prevent-host-death family protein YP_004106763.1 426525 R 652103 CDS YP_004106764.1 316931782 10062583 427037..428581 1 NC_014834.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: bbt:BBta_0368 signal recognition particle subunit FFH/SRP54 (SRP54); SMART: AAA ATPase; signal recognition particle protein 428581 10062583 Rpdx1_0390 Rhodopseudomonas palustris DX-1 signal recognition particle protein YP_004106764.1 427037 D 652103 CDS YP_004106765.1 316931783 10062584 428753..429073 1 NC_014834.1 KEGG: bra:BRADO0378 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; 30S ribosomal protein S16 429073 10062584 Rpdx1_0391 Rhodopseudomonas palustris DX-1 30S ribosomal protein S16 YP_004106765.1 428753 D 652103 CDS YP_004106766.1 316931784 10062585 429086..429616 1 NC_014834.1 KEGG: bja:blr0483 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA processing protein RimM 429616 10062585 Rpdx1_0392 Rhodopseudomonas palustris DX-1 16S rRNA processing protein RimM YP_004106766.1 429086 D 652103 CDS YP_004106767.1 316931785 10062586 429755..430501 1 NC_014834.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: bja:blr0486 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 430501 10062586 Rpdx1_0393 Rhodopseudomonas palustris DX-1 tRNA (guanine-N1)-methyltransferase YP_004106767.1 429755 D 652103 CDS YP_004106768.1 316931786 10062587 430615..431004 1 NC_014834.1 KEGG: nha:Nham_3582 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; 50S ribosomal protein L19 431004 10062587 Rpdx1_0394 Rhodopseudomonas palustris DX-1 50S ribosomal protein L19 YP_004106768.1 430615 D 652103 CDS YP_004106769.1 316931787 10062588 431315..432724 1 NC_014834.1 KEGG: nha:Nham_3584 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase large subunit 432724 10062588 Rpdx1_0395 Rhodopseudomonas palustris DX-1 3-isopropylmalate dehydratase large subunit YP_004106769.1 431315 D 652103 CDS YP_004106770.1 316931788 10062589 complement(432883..433170) 1 NC_014834.1 KEGG: nha:Nham_3587 hypothetical protein; hypothetical protein 433170 10062589 Rpdx1_0396 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106770.1 432883 R 652103 CDS YP_004106771.1 316931789 10062590 complement(433308..433595) 1 NC_014834.1 KEGG: bbt:BBta_0355 hypothetical protein; hypothetical protein 433595 10062590 Rpdx1_0397 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106771.1 433308 R 652103 CDS YP_004106772.1 316931790 10062591 complement(433834..434163) 1 NC_014834.1 KEGG: bra:BRADO0367 hypothetical protein; hypothetical protein 434163 10062591 Rpdx1_0398 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106772.1 433834 R 652103 CDS YP_004106773.1 316931791 10062592 434270..434671 1 NC_014834.1 PFAM: protein of unknown function DUF1025; KEGG: bja:blr0494 hypothetical protein; hypothetical protein 434671 10062592 Rpdx1_0399 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106773.1 434270 D 652103 CDS YP_004106774.1 316931792 10062593 434757..435362 1 NC_014834.1 KEGG: bja:blr0495 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 435362 10062593 Rpdx1_0400 Rhodopseudomonas palustris DX-1 3-isopropylmalate dehydratase small subunit YP_004106774.1 434757 D 652103 CDS YP_004106775.1 316931793 10062594 436094..437785 1 NC_014834.1 KEGG: mag:amb3991 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 437785 10062594 Rpdx1_0401 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004106775.1 436094 D 652103 CDS YP_004106776.1 316931794 10062595 complement(437954..438832) 1 NC_014834.1 KEGG: bbt:BBta_0347 putative citrate lyase beta chain; PFAM: HpcH/HpaI aldolase; citryl-coA lyase 438832 10062595 Rpdx1_0402 Rhodopseudomonas palustris DX-1 citryl-coA lyase YP_004106776.1 437954 R 652103 CDS YP_004106777.1 316931795 10062596 439012..439656 1 NC_014834.1 KEGG: bbt:BBta_0346 putative carbonic anhydrase 2; PFAM: carbonic anhydrase; carbonate dehydratase 439656 10062596 Rpdx1_0403 Rhodopseudomonas palustris DX-1 carbonate dehydratase YP_004106777.1 439012 D 652103 CDS YP_004106778.1 316931796 10062597 complement(439804..440358) 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: bbt:BBta_0345 hypothetical protein; hypothetical protein 440358 10062597 Rpdx1_0404 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106778.1 439804 R 652103 CDS YP_004106779.1 316931797 10062598 complement(440493..441527) 1 NC_014834.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: bbt:BBta_0344 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 441527 10062598 Rpdx1_0405 Rhodopseudomonas palustris DX-1 aspartate-semialdehyde dehydrogenase YP_004106779.1 440493 R 652103 CDS YP_004106780.1 316931798 10062599 441643..442452 1 NC_014834.1 KEGG: bbt:BBta_0343 hypothetical protein; hypothetical protein 442452 10062599 Rpdx1_0406 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106780.1 441643 D 652103 CDS YP_004106781.1 316931799 10062600 442596..442997 1 NC_014834.1 KEGG: nha:Nham_3594 hypothetical protein; hypothetical protein 442997 10062600 Rpdx1_0407 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106781.1 442596 D 652103 CDS YP_004106782.1 316931800 10062601 443096..444466 1 NC_014834.1 KEGG: rle:RL2002 putative transposase-related protein; manually curated; PFAM: transposase IS4 family protein; transposase IS4 family protein 444466 10062601 Rpdx1_0408 Rhodopseudomonas palustris DX-1 transposase IS4 family protein YP_004106782.1 443096 D 652103 CDS YP_004106783.1 316931801 10062602 complement(444668..445780) 1 NC_014834.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: nha:Nham_3595 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 445780 10062602 Rpdx1_0409 Rhodopseudomonas palustris DX-1 3-isopropylmalate dehydrogenase YP_004106783.1 444668 R 652103 CDS YP_004106784.1 316931802 10062603 445809..446006 1 NC_014834.1 KEGG: bbt:BBta_7330 hypothetical protein; hypothetical protein 446006 10062603 Rpdx1_0410 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106784.1 445809 D 652103 CDS YP_004106785.1 316931803 10062604 446003..447196 1 NC_014834.1 KEGG: bja:blr0503 hypothetical protein; hypothetical protein 447196 10062604 Rpdx1_0411 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106785.1 446003 D 652103 CDS YP_004106786.1 316931804 10062605 complement(447351..448130) 1 NC_014834.1 PFAM: oxidoreductase molybdopterin binding; KEGG: nha:Nham_3598 oxidoreductase, molybdopterin binding; oxidoreductase molybdopterin-binding protein 448130 10062605 Rpdx1_0412 Rhodopseudomonas palustris DX-1 oxidoreductase molybdopterin-binding protein YP_004106786.1 447351 R 652103 CDS YP_004106787.1 316931805 10062606 complement(448150..448788) 1 NC_014834.1 KEGG: nha:Nham_3599 hypothetical protein; hypothetical protein 448788 10062606 Rpdx1_0413 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106787.1 448150 R 652103 CDS YP_004106788.1 316931806 10062607 complement(449012..449587) 1 NC_014834.1 KEGG: bbt:BBta_0336 Fas1 domain-containing protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 449587 10062607 Rpdx1_0414 Rhodopseudomonas palustris DX-1 beta-Ig-H3/fasciclin YP_004106788.1 449012 R 652103 CDS YP_004106789.1 316931807 10062608 449861..451372 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0226 malonyl-CoA synthase; AMP-dependent synthetase and ligase 451372 10062608 Rpdx1_0415 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004106789.1 449861 D 652103 CDS YP_004106790.1 316931808 10062609 complement(451729..452676) 1 NC_014834.1 KEGG: met:M446_3953 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 452676 10062609 Rpdx1_0416 Rhodopseudomonas palustris DX-1 cation diffusion facilitator family transporter YP_004106790.1 451729 R 652103 CDS YP_004106791.1 316931809 10062610 453057..453455 1 NC_014834.1 manually curated; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; KEGG: bja:blr0512 succinate dehydrogenase cytochrome b-556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit 453455 10062610 Rpdx1_0417 Rhodopseudomonas palustris DX-1 succinate dehydrogenase, cytochrome b556 subunit YP_004106791.1 453057 D 652103 CDS YP_004106792.1 316931810 10062611 453452..453865 1 NC_014834.1 KEGG: nha:Nham_3617 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; succinate dehydrogenase, hydrophobic membrane anchor protein 453865 10062611 Rpdx1_0418 Rhodopseudomonas palustris DX-1 succinate dehydrogenase, hydrophobic membrane anchor protein YP_004106792.1 453452 D 652103 CDS YP_004106793.1 316931811 10062612 453869..455692 1 NC_014834.1 KEGG: bbt:BBta_0230 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; succinate dehydrogenase, flavoprotein subunit 455692 10062612 Rpdx1_0419 Rhodopseudomonas palustris DX-1 succinate dehydrogenase, flavoprotein subunit YP_004106793.1 453869 D 652103 CDS YP_004106794.1 316931812 10062613 455831..456613 1 NC_014834.1 KEGG: bja:blr0515 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 456613 10062613 Rpdx1_0420 Rhodopseudomonas palustris DX-1 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004106794.1 455831 D 652103 CDS YP_004106795.1 316931813 10062614 456849..457337 1 NC_014834.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bbt:BBta_0235 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 457337 10062614 Rpdx1_0421 Rhodopseudomonas palustris DX-1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_004106795.1 456849 D 652103 CDS YP_004106796.1 316931814 10062615 457338..457598 1 NC_014834.1 KEGG: bbt:BBta_0236 hypothetical protein; hypothetical protein 457598 10062615 Rpdx1_0422 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106796.1 457338 D 652103 CDS YP_004106797.1 316931815 10062616 complement(457814..458842) 1 NC_014834.1 KEGG: lma:LmjF35.0290 hypothetical protein; hypothetical protein 458842 10062616 Rpdx1_0423 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106797.1 457814 R 652103 CDS YP_004106798.1 316931816 10062617 458866..459870 1 NC_014834.1 PFAM: OmpA/MotB domain protein; KEGG: bbt:BBta_0237 OmpA family protein; OmpA/MotB domain-containing protein 459870 10062617 Rpdx1_0424 Rhodopseudomonas palustris DX-1 OmpA/MotB domain-containing protein YP_004106798.1 458866 D 652103 CDS YP_004106799.1 316931817 10062618 complement(459966..460493) 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr0574 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 460493 10062618 Rpdx1_0425 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004106799.1 459966 R 652103 CDS YP_004106800.1 316931818 10062619 complement(460889..462841) 1 NC_014834.1 KEGG: bra:BRADO0344 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; acetate/CoA ligase 462841 10062619 Rpdx1_0426 Rhodopseudomonas palustris DX-1 acetate/CoA ligase YP_004106800.1 460889 R 652103 CDS YP_004106801.1 316931819 10062620 complement(463195..464097) 1 NC_014834.1 PFAM: pseudouridine synthase; KEGG: bra:BRADO0385 putative RNA pseudouridine synthase (uracil hydrolyase); pseudouridine synthase 464097 10062620 Rpdx1_0427 Rhodopseudomonas palustris DX-1 pseudouridine synthase YP_004106801.1 463195 R 652103 CDS YP_004106802.1 316931820 10062621 464126..465073 1 NC_014834.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: nha:Nham_0402 signal recognition particle-docking protein FtsY; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 465073 10062621 Rpdx1_0428 Rhodopseudomonas palustris DX-1 signal recognition particle-docking protein FtsY YP_004106802.1 464126 D 652103 CDS YP_004106803.1 316931821 10062622 465070..465687 1 NC_014834.1 KEGG: nwi:Nwi_0317 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein A 465687 10062622 Rpdx1_0429 Rhodopseudomonas palustris DX-1 intracellular septation protein A YP_004106803.1 465070 D 652103 CDS YP_004106804.1 316931822 10062623 complement(465719..466102) 1 NC_014834.1 KEGG: mch:Mchl_2719 hypothetical protein; hypothetical protein 466102 10062623 Rpdx1_0430 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106804.1 465719 R 652103 CDS YP_004106805.1 316931823 10062624 complement(466243..466839) 1 NC_014834.1 KEGG: nwi:Nwi_0318 periplasmic protein thiol-disulfide oxidoreductase DsbE; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; protein thiol/disulfide oxidoreductase DsbE 466839 10062624 Rpdx1_0431 Rhodopseudomonas palustris DX-1 protein thiol/disulfide oxidoreductase DsbE YP_004106805.1 466243 R 652103 CDS YP_004106806.1 316931824 10062625 complement(466855..467028) 1 NC_014834.1 KEGG: nha:Nham_0412 heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); heme exporter protein CcmD 467028 10062625 Rpdx1_0432 Rhodopseudomonas palustris DX-1 heme exporter protein CcmD YP_004106806.1 466855 R 652103 CDS YP_004106807.1 316931825 10062626 complement(467028..467762) 1 NC_014834.1 KEGG: nwi:Nwi_0320 cytochrome c-type biogenesis protein CcmC; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; heme exporter protein CcmC 467762 10062626 Rpdx1_0433 Rhodopseudomonas palustris DX-1 heme exporter protein CcmC YP_004106807.1 467028 R 652103 CDS YP_004106808.1 316931826 10062627 complement(467933..468601) 1 NC_014834.1 KEGG: bja:blr0468 heme exporter protein B; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB 468601 10062627 Rpdx1_0434 Rhodopseudomonas palustris DX-1 heme exporter protein CcmB YP_004106808.1 467933 R 652103 CDS YP_004106809.1 316931827 10062628 complement(468598..469200) 1 NC_014834.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: bja:blr0467 cytochrome c biogenesis protein CcmA; SMART: AAA ATPase; heme exporter protein CcmA 469200 10062628 Rpdx1_0435 Rhodopseudomonas palustris DX-1 heme exporter protein CcmA YP_004106809.1 468598 R 652103 CDS YP_004106810.1 316931828 10062629 469416..472133 1 NC_014834.1 KEGG: bbt:BBta_0382 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; aconitate hydratase 1 472133 10062629 Rpdx1_0436 Rhodopseudomonas palustris DX-1 aconitate hydratase 1 YP_004106810.1 469416 D 652103 CDS YP_004106811.1 316931829 10062630 472314..473069 1 NC_014834.1 PFAM: protein of unknown function DUF1223; KEGG: bja:bll0465 hypothetical protein; hypothetical protein 473069 10062630 Rpdx1_0437 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106811.1 472314 D 652103 CDS YP_004106812.1 316931830 10062631 473490..473858 1 NC_014834.1 KEGG: nha:Nham_0406 hypothetical protein; hypothetical protein 473858 10062631 Rpdx1_0438 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106812.1 473490 D 652103 CDS YP_004106813.1 316931831 10062632 complement(473969..474499) 1 NC_014834.1 KEGG: bja:blr0463 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; phosphinothricin acetyltransferase 474499 10062632 Rpdx1_0439 Rhodopseudomonas palustris DX-1 phosphinothricin acetyltransferase YP_004106813.1 473969 R 652103 CDS YP_004106814.1 316931832 10062633 complement(474656..475447) 1 NC_014834.1 PFAM: protein of unknown function UPF0005; KEGG: oca:OCAR_4575 integral membrane protein; hypothetical protein 475447 10062633 Rpdx1_0440 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106814.1 474656 R 652103 CDS YP_004106815.1 316931833 10062634 complement(475795..478368) 1 NC_014834.1 PFAM: protein of unknown function DUF214; KEGG: bja:blr0461 ABC transporter permease; hypothetical protein 478368 10062634 Rpdx1_0441 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106815.1 475795 R 652103 CDS YP_004106816.1 316931834 10062635 complement(478372..479115) 1 NC_014834.1 KEGG: bja:blr0460 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 479115 10062635 Rpdx1_0442 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004106816.1 478372 R 652103 CDS YP_004106817.1 316931835 10062636 479195..479812 1 NC_014834.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bra:BRADO0400 multifunctional: acyl-CoA thioesterase I; protease I; lysophospholipasel(I); G-D-S-L family lipolytic protein 479812 10062636 Rpdx1_0443 Rhodopseudomonas palustris DX-1 G-D-S-L family lipolytic protein YP_004106817.1 479195 D 652103 CDS YP_004106818.1 316931836 10062637 480019..480558 1 NC_014834.1 KEGG: bra:BRADO0401 putative 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; 2'-5' RNA ligase 480558 10062637 Rpdx1_0444 Rhodopseudomonas palustris DX-1 2'-5' RNA ligase YP_004106818.1 480019 D 652103 CDS YP_004106819.1 316931837 10062638 480645..481829 1 NC_014834.1 PFAM: AFG1-family ATPase; KEGG: bra:BRADO0402 AFG1 family ATPase; AFG1 family ATPase 481829 10062638 Rpdx1_0445 Rhodopseudomonas palustris DX-1 AFG1 family ATPase YP_004106819.1 480645 D 652103 CDS YP_004106820.1 316931838 10062639 481974..482942 1 NC_014834.1 KEGG: bbt:BBta_0392 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase 482942 10062639 Rpdx1_0446 Rhodopseudomonas palustris DX-1 malate dehydrogenase YP_004106820.1 481974 D 652103 CDS YP_004106821.1 316931839 10062640 483038..484234 1 NC_014834.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: oca:OCAR_6554 succinyl-CoA synthetase beta chain (SCS-alpha); PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit beta 484234 10062640 Rpdx1_0447 Rhodopseudomonas palustris DX-1 succinyl-CoA synthetase subunit beta YP_004106821.1 483038 D 652103 CDS YP_004106822.1 316931840 10062641 484299..485183 1 NC_014834.1 KEGG: bbt:BBta_0394 succinyl-CoA synthetase (ADP-forming) alpha subunit; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; succinyl-CoA synthetase subunit alpha 485183 10062641 Rpdx1_0448 Rhodopseudomonas palustris DX-1 succinyl-CoA synthetase subunit alpha YP_004106822.1 484299 D 652103 CDS YP_004106823.1 316931841 10062642 485311..488268 1 NC_014834.1 KEGG: bbt:BBta_0395 2-oxoglutarate dehydrogenase E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; 2-oxoglutarate dehydrogenase, E1 subunit 488268 10062642 Rpdx1_0449 Rhodopseudomonas palustris DX-1 2-oxoglutarate dehydrogenase, E1 subunit YP_004106823.1 485311 D 652103 CDS YP_004106824.1 316931842 10062643 488368..489609 1 NC_014834.1 KEGG: bra:BRADO0407 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 489609 10062643 Rpdx1_0450 Rhodopseudomonas palustris DX-1 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_004106824.1 488368 D 652103 CDS YP_004106825.1 316931843 10062644 489675..490067 1 NC_014834.1 KEGG: bmr:BMI_I1943 hypothetical protein; hypothetical protein 490067 10062644 Rpdx1_0451 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106825.1 489675 D 652103 CDS YP_004106826.1 316931844 10062645 490075..490821 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO0408 oxidoreductase; short-chain dehydrogenase/reductase SDR 490821 10062645 Rpdx1_0452 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004106826.1 490075 D 652103 CDS YP_004106827.1 316931845 10062646 490853..492256 1 NC_014834.1 KEGG: bbt:BBta_0398 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; dihydrolipoamide dehydrogenase 492256 10062646 Rpdx1_0453 Rhodopseudomonas palustris DX-1 dihydrolipoamide dehydrogenase YP_004106827.1 490853 D 652103 CDS YP_004106828.1 316931846 10062647 492283..492840 1 NC_014834.1 KEGG: bja:bll0448 hypothetical protein; hypothetical protein 492840 10062647 Rpdx1_0454 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106828.1 492283 D 652103 CDS YP_004106829.1 316931847 10062648 492946..494388 1 NC_014834.1 KEGG: rmr:Rmar_2078 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter 494388 10062648 Rpdx1_0455 Rhodopseudomonas palustris DX-1 anion transporter YP_004106829.1 492946 D 652103 CDS YP_004106830.1 316931848 10062649 complement(494394..494984) 1 NC_014834.1 KEGG: oca:OCAR_4586 hypothetical protein; hypothetical protein 494984 10062649 Rpdx1_0456 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106830.1 494394 R 652103 CDS YP_004106831.1 316931849 10062650 complement(495125..496096) 1 NC_014834.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bja:blr0446 site-specific tyrosine recombinase XerC; integrase family protein 496096 10062650 Rpdx1_0457 Rhodopseudomonas palustris DX-1 integrase family protein YP_004106831.1 495125 R 652103 CDS YP_004106832.1 316931850 10062651 496293..498503 1 NC_014834.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: nha:Nham_0535 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' 498503 10062651 Rpdx1_0458 Rhodopseudomonas palustris DX-1 primosomal protein N' YP_004106832.1 496293 D 652103 CDS YP_004106833.1 316931851 10062652 complement(498674..499150) 1 NC_014834.1 KEGG: bja:blr044 hypothetical protein; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; rare lipoprotein A 499150 10062652 Rpdx1_0459 Rhodopseudomonas palustris DX-1 rare lipoprotein A YP_004106833.1 498674 R 652103 CDS YP_004106834.1 316931852 10062653 499853..500413 1 NC_014834.1 KEGG: nwi:Nwi_0429 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 500413 10062653 Rpdx1_0460 Rhodopseudomonas palustris DX-1 ATP synthase F1 subunit delta YP_004106834.1 499853 D 652103 CDS YP_004106835.1 316931853 10062654 500413..501945 1 NC_014834.1 KEGG: nha:Nham_0532 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha 501945 10062654 Rpdx1_0461 Rhodopseudomonas palustris DX-1 ATP synthase F1 subunit alpha YP_004106835.1 500413 D 652103 CDS YP_004106836.1 316931854 10062655 502089..502964 1 NC_014834.1 KEGG: nha:Nham_0531 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; ATP synthase F1 subunit gamma 502964 10062655 Rpdx1_0462 Rhodopseudomonas palustris DX-1 ATP synthase F1 subunit gamma YP_004106836.1 502089 D 652103 CDS YP_004106837.1 316931855 10062656 503036..504466 1 NC_014834.1 TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: nha:Nham_0529 F0F1 ATP synthase subunit beta; SMART: AAA ATPase; ATP synthase F1 subunit beta 504466 10062656 Rpdx1_0463 Rhodopseudomonas palustris DX-1 ATP synthase F1 subunit beta YP_004106837.1 503036 D 652103 CDS YP_004106838.1 316931856 10062657 504583..505002 1 NC_014834.1 KEGG: nwi:Nwi_0434 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; ATP synthase F1 subunit epsilon 505002 10062657 Rpdx1_0464 Rhodopseudomonas palustris DX-1 ATP synthase F1 subunit epsilon YP_004106838.1 504583 D 652103 CDS YP_004106839.1 316931857 10062658 complement(505204..505713) 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: bja:blr0437 dinucleoside polyphosphate hydrolase; NUDIX hydrolase 505713 10062658 Rpdx1_0465 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004106839.1 505204 R 652103 CDS YP_004106840.1 316931858 10062659 complement(505710..506657) 1 NC_014834.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 506657 10062659 Rpdx1_0466 Rhodopseudomonas palustris DX-1 NAD-dependent epimerase/dehydratase YP_004106840.1 505710 R 652103 CDS YP_004106841.1 316931859 10062660 506876..507946 1 NC_014834.1 KEGG: mea:Mex_1p4746 hypothetical protein; hypothetical protein 507946 10062660 Rpdx1_0467 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106841.1 506876 D 652103 CDS YP_004106842.1 316931860 10062661 complement(508022..508528) 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: bja:blr0436 dinucleoside polyphosphate hydrolase; NUDIX hydrolase 508528 10062661 Rpdx1_0468 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004106842.1 508022 R 652103 CDS YP_004106843.1 316931861 10062662 complement(508568..509806) 1 NC_014834.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: nha:Nham_0526 protein of unknown function DUF610, YibQ; hypothetical protein 509806 10062662 Rpdx1_0469 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106843.1 508568 R 652103 CDS YP_004106844.1 316931862 10062663 complement(510158..511537) 1 NC_014834.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: bja:blr0434 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 511537 10062663 Rpdx1_0470 Rhodopseudomonas palustris DX-1 carboxyl-terminal protease YP_004106844.1 510158 R 652103 CDS YP_004106845.1 316931863 10062664 complement(511534..512934) 1 NC_014834.1 KEGG: nha:Nham_0524 peptidase M23B; manually curated; PFAM: Peptidase M23; peptidase M23 512934 10062664 Rpdx1_0471 Rhodopseudomonas palustris DX-1 peptidase M23 YP_004106845.1 511534 R 652103 CDS YP_004106846.1 316931864 10062665 complement(512954..513427) 1 NC_014834.1 PFAM: protein of unknown function DUF163; KEGG: bra:BRADO0427 hypothetical protein; hypothetical protein 513427 10062665 Rpdx1_0472 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106846.1 512954 R 652103 CDS YP_004106847.1 316931865 10062666 complement(513530..513826) 1 NC_014834.1 KEGG: bbt:BBta_0417 hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 513826 10062666 Rpdx1_0473 Rhodopseudomonas palustris DX-1 iojap family protein YP_004106847.1 513530 R 652103 CDS YP_004106848.1 316931866 10062667 complement(514195..514824) 1 NC_014834.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; KEGG: bja:blr0430 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 514824 10062667 Rpdx1_0474 Rhodopseudomonas palustris DX-1 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_004106848.1 514195 R 652103 CDS YP_004106849.1 316931867 10062668 complement(514849..516141) 1 NC_014834.1 KEGG: bja:blr0429 gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 516141 10062668 Rpdx1_0475 Rhodopseudomonas palustris DX-1 gamma-glutamyl phosphate reductase YP_004106849.1 514849 R 652103 CDS YP_004106850.1 316931868 10062669 516265..516546 1 NC_014834.1 TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: mpo:Mpop_0594 putative addiction module antidote protein, CopG/Arc/MetJ family; addiction module antidote protein 516546 10062669 Rpdx1_0476 Rhodopseudomonas palustris DX-1 addiction module antidote protein YP_004106850.1 516265 D 652103 CDS YP_004106851.1 316931869 10062671 complement(516834..517964) 1 NC_014834.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: bbt:BBta_0422 gamma-glutamyl kinase; SMART: PUA domain containing protein; glutamate 5-kinase 517964 10062671 Rpdx1_0478 Rhodopseudomonas palustris DX-1 glutamate 5-kinase YP_004106851.1 516834 R 652103 CDS YP_004106852.1 316931870 10062672 complement(518122..519183) 1 NC_014834.1 KEGG: bra:BRADO0432 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP-binding protein Obg/CgtA 519183 10062672 Rpdx1_0479 Rhodopseudomonas palustris DX-1 GTP-binding protein Obg/CgtA YP_004106852.1 518122 R 652103 CDS YP_004106853.1 316931871 10062673 519335..520234 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbt:BBta_0424 DMT family permease; hypothetical protein 520234 10062673 Rpdx1_0480 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106853.1 519335 D 652103 CDS YP_004106854.1 316931872 10062674 complement(520235..520408) 1 NC_014834.1 KEGG: der:Dere_GG10289 GG10289 gene product from transcript GG10289-RA; hypothetical protein 520408 10062674 Rpdx1_0481 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106854.1 520235 R 652103 CDS YP_004106855.1 316931873 10062675 complement(520539..520730) 1 NC_014834.1 KEGG: ecb:100060039 hypothetical LOC100060039; hypothetical protein 520730 10062675 Rpdx1_0482 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106855.1 520539 R 652103 CDS YP_004106856.1 316931874 10062676 complement(520934..521533) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_0516 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 521533 10062676 Rpdx1_0483 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004106856.1 520934 R 652103 CDS YP_004106857.1 316931875 10062677 complement(521669..521941) 1 NC_014834.1 KEGG: nha:Nham_0515 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; 50S ribosomal protein L27 521941 10062677 Rpdx1_0484 Rhodopseudomonas palustris DX-1 50S ribosomal protein L27 YP_004106857.1 521669 R 652103 CDS YP_004106858.1 316931876 10062678 complement(522029..522409) 1 NC_014834.1 KEGG: nha:Nham_0514 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; 50S ribosomal protein L21 522409 10062678 Rpdx1_0485 Rhodopseudomonas palustris DX-1 50S ribosomal protein L21 YP_004106858.1 522029 R 652103 CDS YP_004106859.1 316931877 10062679 522739..523890 1 NC_014834.1 KEGG: bra:BRADO0437 putative glucokinase; putative glucokinase 523890 10062679 Rpdx1_0486 Rhodopseudomonas palustris DX-1 putative glucokinase YP_004106859.1 522739 D 652103 CDS YP_004106860.1 316931878 10062681 complement(524318..525634) 1 NC_014834.1 KEGG: bja:bll1985 HipA protein; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; HipA N-terminal domain-containing protein 525634 10062681 Rpdx1_0487 Rhodopseudomonas palustris DX-1 HipA N-terminal domain-containing protein YP_004106860.1 524318 R 652103 CDS YP_004106861.1 316931879 10062682 complement(525636..525890) 1 NC_014834.1 KEGG: bja:bsl1986 transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 525890 10062682 Rpdx1_0488 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004106861.1 525636 R 652103 CDS YP_004106862.1 316931880 10062683 526109..527110 1 NC_014834.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: bja:bll6944 HupU protein; NADH ubiquinone oxidoreductase 20 kDa subunit 527110 10062683 Rpdx1_0489 Rhodopseudomonas palustris DX-1 NADH ubiquinone oxidoreductase 20 kDa subunit YP_004106862.1 526109 D 652103 CDS YP_004106863.1 316931881 10062684 527107..528552 1 NC_014834.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: bja:bll6943 HupV protein; nickel-dependent hydrogenase large subunit 528552 10062684 Rpdx1_0490 Rhodopseudomonas palustris DX-1 nickel-dependent hydrogenase large subunit YP_004106863.1 527107 D 652103 CDS YP_004106864.1 316931882 10062685 528788..529900 1 NC_014834.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: bja:bll6942 uptake hydrogenase precursor; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; hydrogenase (NiFe) small subunit HydA 529900 10062685 Rpdx1_0491 Rhodopseudomonas palustris DX-1 hydrogenase (NiFe) small subunit HydA YP_004106864.1 528788 D 652103 CDS YP_004106865.1 316931883 10062686 529919..531712 1 NC_014834.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: bbt:BBta_1997 uptake hydrogenase large subunit precursor; nickel-dependent hydrogenase large subunit 531712 10062686 Rpdx1_0492 Rhodopseudomonas palustris DX-1 nickel-dependent hydrogenase large subunit YP_004106865.1 529919 D 652103 CDS YP_004106866.1 316931884 10062687 531729..532457 1 NC_014834.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; KEGG: bja:blr6947 Ni/Fe-hydrogenase B-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 532457 10062687 Rpdx1_0493 Rhodopseudomonas palustris DX-1 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_004106866.1 531729 D 652103 CDS YP_004106867.1 316931885 10062688 532585..533172 1 NC_014834.1 KEGG: bja:bll6939 HupD protein; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; hydrogenase expression/formation protein 533172 10062688 Rpdx1_0494 Rhodopseudomonas palustris DX-1 hydrogenase expression/formation protein YP_004106867.1 532585 D 652103 CDS YP_004106868.1 316931886 10062689 533186..533779 1 NC_014834.1 KEGG: xau:Xaut_2188 HupE/UreJ protein; HupE/UreJ protein 533779 10062689 Rpdx1_0495 Rhodopseudomonas palustris DX-1 HupE/UreJ protein YP_004106868.1 533186 D 652103 CDS YP_004106869.1 316931887 10062690 533801..534103 1 NC_014834.1 KEGG: bja:bsl6938 hydrogenase expression/formation protein; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 534103 10062690 Rpdx1_0496 Rhodopseudomonas palustris DX-1 hydrogenase assembly chaperone HypC/HupF YP_004106869.1 533801 D 652103 CDS YP_004106870.1 316931888 10062691 534324..534725 1 NC_014834.1 PFAM: hydrogenase-1 expression HyaE; KEGG: bra:BRADO1689 hydrogenase expression/formation protein HupG; hydrogenase-1 expression HyaE 534725 10062691 Rpdx1_0497 Rhodopseudomonas palustris DX-1 hydrogenase-1 expression HyaE YP_004106870.1 534324 D 652103 CDS YP_004106871.1 316931889 10062692 534722..535588 1 NC_014834.1 PFAM: HupH hydrogenase expression protein; KEGG: bra:BRADO1690 hydrogenase expression/formation protein HupH; HupH hydrogenase expression protein 535588 10062692 Rpdx1_0498 Rhodopseudomonas palustris DX-1 HupH hydrogenase expression protein YP_004106871.1 534722 D 652103 CDS YP_004106872.1 316931890 10062693 535585..535797 1 NC_014834.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: azo:azo3796 rubredoxin protein; rubredoxin-type Fe(Cys)4 protein 535797 10062693 Rpdx1_0499 Rhodopseudomonas palustris DX-1 rubredoxin-type Fe(Cys)4 protein YP_004106872.1 535585 D 652103 CDS YP_004106873.1 316931891 10062694 535787..536314 1 NC_014834.1 KEGG: bbt:BBta_2004 hydrogenase expression/formation; hydrogenase expression/formation 536314 10062694 Rpdx1_0500 Rhodopseudomonas palustris DX-1 hydrogenase expression/formation YP_004106873.1 535787 D 652103 CDS YP_004106874.1 316931892 10062695 536311..537420 1 NC_014834.1 KEGG: bbt:BBta_2005 hydrogenase expression/formation; hydrogenase expression/formation 537420 10062695 Rpdx1_0501 Rhodopseudomonas palustris DX-1 hydrogenase expression/formation YP_004106874.1 536311 D 652103 CDS YP_004106875.1 316931893 10062696 537413..537754 1 NC_014834.1 KEGG: bja:bll6932 HypA protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; hydrogenase nickel incorporation protein HypA 537754 10062696 Rpdx1_0502 Rhodopseudomonas palustris DX-1 hydrogenase nickel incorporation protein HypA YP_004106875.1 537413 D 652103 CDS YP_004106876.1 316931894 10062697 538042..538737 1 NC_014834.1 KEGG: msl:Msil_2744 hydrogenase accessory protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; hydrogenase nickel incorporation protein HypB 538737 10062697 Rpdx1_0503 Rhodopseudomonas palustris DX-1 hydrogenase nickel incorporation protein HypB YP_004106876.1 538042 D 652103 CDS YP_004106877.1 316931895 10062698 538742..540994 1 NC_014834.1 KEGG: bja:bll6930 hydrogenase maturation protein; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; zinc finger HypF domain protein; (NiFe) hydrogenase maturation protein HypF 540994 10062698 Rpdx1_0504 Rhodopseudomonas palustris DX-1 (NiFe) hydrogenase maturation protein HypF YP_004106877.1 538742 D 652103 CDS YP_004106878.1 316931896 10062699 540994..541227 1 NC_014834.1 KEGG: bja:bsl6929 hydrogenase expression/formation protein; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 541227 10062699 Rpdx1_0505 Rhodopseudomonas palustris DX-1 hydrogenase assembly chaperone HypC/HupF YP_004106878.1 540994 D 652103 CDS YP_004106879.1 316931897 10062700 541224..542366 1 NC_014834.1 KEGG: bja:bll6928 HypD' protein; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD 542366 10062700 Rpdx1_0506 Rhodopseudomonas palustris DX-1 hydrogenase expression/formation protein HypD YP_004106879.1 541224 D 652103 CDS YP_004106880.1 316931898 10062701 542363..543409 1 NC_014834.1 KEGG: bbt:BBta_2011 hydrogenase maturation; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; hydrogenase expression/formation protein HypE 543409 10062701 Rpdx1_0507 Rhodopseudomonas palustris DX-1 hydrogenase expression/formation protein HypE YP_004106880.1 542363 D 652103 CDS YP_004106881.1 316931899 10062702 543449..544897 1 NC_014834.1 KEGG: bra:BRADO1701 two component sigma-54-dependent hydrogenase fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; Fis family two component sigma54 specific transcriptional regulator 544897 10062702 Rpdx1_0508 Rhodopseudomonas palustris DX-1 Fis family two component sigma54 specific transcriptional regulator YP_004106881.1 543449 D 652103 CDS YP_004106882.1 316931900 10062703 544890..546239 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bja:bll6924 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase 546239 10062703 Rpdx1_0509 Rhodopseudomonas palustris DX-1 PAS/PAC sensor signal transduction histidine kinase YP_004106882.1 544890 D 652103 CDS YP_004106883.1 316931901 10062704 complement(546469..548178) 1 NC_014834.1 KEGG: bja:blr2350 hypothetical protein; hypothetical protein 548178 10062704 Rpdx1_0510 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106883.1 546469 R 652103 CDS YP_004106884.1 316931902 10062705 complement(548186..549277) 1 NC_014834.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: bbt:BBta_6730 chemotaxis response regulator protein CheB-glutamate methylesterase; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 549277 10062705 Rpdx1_0511 Rhodopseudomonas palustris DX-1 response regulator receiver modulated CheB methylesterase YP_004106884.1 548186 R 652103 CDS YP_004106885.1 316931903 10062706 complement(549298..550155) 1 NC_014834.1 PFAM: MCP methyltransferase CheR-type; KEGG: bja:blr2348 protein-glutamate O-methyltransferase; SMART: MCP methyltransferase CheR-type; CheR-type MCP methyltransferase 550155 10062706 Rpdx1_0512 Rhodopseudomonas palustris DX-1 CheR-type MCP methyltransferase YP_004106885.1 549298 R 652103 CDS YP_004106886.1 316931904 10062707 complement(550305..552113) 1 NC_014834.1 KEGG: bja:blr2347 putative sensory transducer protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 552113 10062707 Rpdx1_0513 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004106886.1 550305 R 652103 CDS YP_004106887.1 316931905 10062708 complement(552180..552662) 1 NC_014834.1 KEGG: bbt:BBta_7835 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 552662 10062708 Rpdx1_0514 Rhodopseudomonas palustris DX-1 CheW protein YP_004106887.1 552180 R 652103 CDS YP_004106888.1 316931906 10062709 complement(552723..553190) 1 NC_014834.1 KEGG: bbt:BBta_6736 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 553190 10062709 Rpdx1_0515 Rhodopseudomonas palustris DX-1 CheW protein YP_004106888.1 552723 R 652103 CDS YP_004106889.1 316931907 10062710 complement(553190..555211) 1 NC_014834.1 KEGG: bbt:BBta_6737 chemotaxis protein CheA; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; CheA signal transduction histidine kinase 555211 10062710 Rpdx1_0516 Rhodopseudomonas palustris DX-1 CheA signal transduction histidine kinase YP_004106889.1 553190 R 652103 CDS YP_004106890.1 316931908 10062711 complement(555208..555573) 1 NC_014834.1 KEGG: bja:blr2342 chemotaxis two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 555573 10062711 Rpdx1_0517 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004106890.1 555208 R 652103 CDS YP_004106891.1 316931909 10062712 complement(555573..555896) 1 NC_014834.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bja:blr2341 hypothetical protein; sulfate transporter/antisigma-factor antagonist STAS 555896 10062712 Rpdx1_0518 Rhodopseudomonas palustris DX-1 sulfate transporter/antisigma-factor antagonist STAS YP_004106891.1 555573 R 652103 CDS YP_004106892.1 316931910 10062713 556197..557315 1 NC_014834.1 KEGG: bja:bll2340 two-component response regulator; PFAM: metal-dependent phosphohydrolase HD sub domain; response regulator receiver; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; response regulator receiver modulated metal dependent phosphohydrolase 557315 10062713 Rpdx1_0519 Rhodopseudomonas palustris DX-1 response regulator receiver modulated metal dependent phosphohydrolase YP_004106892.1 556197 D 652103 CDS YP_004106893.1 316931911 10062714 complement(557337..557678) 1 NC_014834.1 KEGG: pla:Plav_0565 hypothetical protein; hypothetical protein 557678 10062714 Rpdx1_0520 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106893.1 557337 R 652103 CDS YP_004106894.1 316931912 10062715 complement(557675..560209) 1 NC_014834.1 KEGG: pla:Plav_0564 cytochrome c oxidase subunit I type; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 560209 10062715 Rpdx1_0521 Rhodopseudomonas palustris DX-1 cytochrome c oxidase subunit I YP_004106894.1 557675 R 652103 CDS YP_004106895.1 316931913 10062716 complement(560206..560907) 1 NC_014834.1 KEGG: nwi:Nwi_2313 cytochrome c oxidase, subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c oxidase subunit II 560907 10062716 Rpdx1_0522 Rhodopseudomonas palustris DX-1 cytochrome c oxidase subunit II YP_004106895.1 560206 R 652103 CDS YP_004106896.1 316931914 10062717 560929..561411 1 NC_014834.1 KEGG: protein of unknown function DUF2231, transmembrane; hypothetical protein 561411 10062717 Rpdx1_0523 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106896.1 560929 D 652103 CDS YP_004106897.1 316931915 10062718 complement(561375..561869) 1 NC_014834.1 KEGG: pla:Plav_0562 hypothetical protein; hypothetical protein 561869 10062718 Rpdx1_0524 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106897.1 561375 R 652103 CDS YP_004106898.1 316931916 10062719 complement(561866..562600) 1 NC_014834.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: nwi:Nwi_2311 hypothetical protein; caa3-type cytochrome c oxidase assembly factor CtaG-like protein 562600 10062719 Rpdx1_0525 Rhodopseudomonas palustris DX-1 caa3-type cytochrome c oxidase assembly factor CtaG-like protein YP_004106898.1 561866 R 652103 CDS YP_004106899.1 316931917 10062720 complement(562984..564120) 1 NC_014834.1 KEGG: nha:Nham_0500 hypothetical protein; hypothetical protein 564120 10062720 Rpdx1_0526 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106899.1 562984 R 652103 CDS YP_004106900.1 316931918 10062721 complement(564144..566045) 1 NC_014834.1 SMART: von Willebrand factor type A; TIGRFAM: cobalt chelatase, pCobT subunit; KEGG: bbt:BBta_7564 aerobic cobaltochelatase subunit CobT; PFAM: Cobalt chelatase CobT subunit; cobalt chelatase large subunit 566045 10062721 Rpdx1_0527 Rhodopseudomonas palustris DX-1 cobalt chelatase large subunit YP_004106900.1 564144 R 652103 CDS YP_004106901.1 316931919 10062722 complement(566051..566563) 1 NC_014834.1 PFAM: protein of unknown function DUF29; KEGG: mrd:Mrad2831_3699 hypothetical protein; hypothetical protein 566563 10062722 Rpdx1_0528 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106901.1 566051 R 652103 CDS YP_004106902.1 316931920 10062723 complement(566610..567605) 1 NC_014834.1 TIGRFAM: cobalt chelatase, pCobS small subunit; KEGG: oca:OCAR_4070 cobaltochelatase, CobS subunit; PFAM: ATPase associated with various cellular activities AAA_5; cobalt chelatase small subunit 567605 10062723 Rpdx1_0529 Rhodopseudomonas palustris DX-1 cobalt chelatase small subunit YP_004106902.1 566610 R 652103 CDS YP_004106903.1 316931921 10062724 567882..568505 1 NC_014834.1 PFAM: SNARE associated Golgi protein; KEGG: bja:blr0181 hypothetical protein; hypothetical protein 568505 10062724 Rpdx1_0530 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106903.1 567882 D 652103 CDS YP_004106904.1 316931922 10062725 complement(568625..569269) 1 NC_014834.1 KEGG: nha:Nham_0496 heat shock protein DnaJ-like; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 569269 10062725 Rpdx1_0531 Rhodopseudomonas palustris DX-1 heat shock protein DnaJ domain-containing protein YP_004106904.1 568625 R 652103 CDS YP_004106905.1 316931923 10062726 569387..569656 1 NC_014834.1 PFAM: BolA family protein; KEGG: nha:Nham_0495 BolA-like protein; BolA family protein 569656 10062726 Rpdx1_0532 Rhodopseudomonas palustris DX-1 BolA family protein YP_004106905.1 569387 D 652103 CDS YP_004106906.1 316931924 10062727 complement(569751..571067) 1 NC_014834.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bbt:BBta_7571 CBS domain-containing protein; hypothetical protein 571067 10062727 Rpdx1_0533 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106906.1 569751 R 652103 CDS YP_004106907.1 316931925 10062728 complement(571082..572230) 1 NC_014834.1 KEGG: bja:bll0187 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 572230 10062728 Rpdx1_0534 Rhodopseudomonas palustris DX-1 3-dehydroquinate synthase YP_004106907.1 571082 R 652103 CDS YP_004106908.1 316931926 10062729 complement(572227..572844) 1 NC_014834.1 KEGG: nha:Nham_0490 shikimate kinase; PFAM: shikimate kinase; shikimate kinase 572844 10062729 Rpdx1_0535 Rhodopseudomonas palustris DX-1 shikimate kinase YP_004106908.1 572227 R 652103 CDS YP_004106909.1 316931927 10062730 572980..573126 1 NC_014834.1 KEGG: bja:bsr0189 hypothetical protein; hypothetical protein 573126 10062730 Rpdx1_0536 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106909.1 572980 D 652103 CDS YP_004106910.1 316931928 10062731 573176..574159 1 NC_014834.1 KEGG: nha:Nham_0488 tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; tyrosine recombinase XerD 574159 10062731 Rpdx1_0537 Rhodopseudomonas palustris DX-1 tyrosine recombinase XerD YP_004106910.1 573176 D 652103 CDS YP_004106911.1 316931929 10062732 574272..574895 1 NC_014834.1 PFAM: transcriptional regulator PadR family protein; KEGG: acr:Acry_2218 PadR-like family transcriptional regulator; PadR-like family transcriptional regulator 574895 10062732 Rpdx1_0538 Rhodopseudomonas palustris DX-1 PadR-like family transcriptional regulator YP_004106911.1 574272 D 652103 CDS YP_004106912.1 316931930 10062733 574938..576074 1 NC_014834.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; KEGG: nwi:Nwi_0392 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 576074 10062733 Rpdx1_0539 Rhodopseudomonas palustris DX-1 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_004106912.1 574938 D 652103 CDS YP_004106913.1 316931931 10062734 576447..577880 1 NC_014834.1 KEGG: bra:BRADO0605 putative exported protein; putative transcriptional regulatory protein at C-terminal; putative transcriptional regulatory protein 577880 10062734 Rpdx1_0540 Rhodopseudomonas palustris DX-1 putative transcriptional regulatory protein YP_004106913.1 576447 D 652103 CDS YP_004106914.1 316931932 10062735 complement(578120..580960) 1 NC_014834.1 KEGG: bja:bll0204 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; preprotein translocase subunit SecA 580960 10062735 Rpdx1_0541 Rhodopseudomonas palustris DX-1 preprotein translocase subunit SecA YP_004106914.1 578120 R 652103 CDS YP_004106915.1 316931933 10062736 581303..582220 1 NC_014834.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bja:blr0205 hypothetical protein; PpiC-type peptidyl-prolyl cis-trans isomerase 582220 10062736 Rpdx1_0542 Rhodopseudomonas palustris DX-1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004106915.1 581303 D 652103 CDS YP_004106916.1 316931934 10062737 complement(582313..585036) 1 NC_014834.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: bja:bll0924 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; DNA mismatch repair protein MutS 585036 10062737 Rpdx1_0543 Rhodopseudomonas palustris DX-1 DNA mismatch repair protein MutS YP_004106916.1 582313 R 652103 CDS YP_004106917.1 316931935 10062738 585199..586407 1 NC_014834.1 TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; KEGG: bja:blr0925 beta-ketoadipyl CoA thiolase; PFAM: Thiolase-like; beta-ketoadipyl CoA thiolase 586407 10062738 Rpdx1_0544 Rhodopseudomonas palustris DX-1 beta-ketoadipyl CoA thiolase YP_004106917.1 585199 D 652103 CDS YP_004106918.1 316931936 10062739 complement(586575..588137) 1 NC_014834.1 KEGG: bbt:BBta_7638 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 588137 10062739 Rpdx1_0545 Rhodopseudomonas palustris DX-1 EmrB/QacA subfamily drug resistance transporter YP_004106918.1 586575 R 652103 CDS YP_004106919.1 316931937 10062740 complement(588141..589307) 1 NC_014834.1 PFAM: secretion protein HlyD family protein; KEGG: bra:BRADO0542 efflux pump protein; secretion protein HlyD family protein 589307 10062740 Rpdx1_0546 Rhodopseudomonas palustris DX-1 secretion protein HlyD family protein YP_004106919.1 588141 R 652103 CDS YP_004106920.1 316931938 10062741 complement(589325..589786) 1 NC_014834.1 KEGG: bja:bll0933 transcriptional regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 589786 10062741 Rpdx1_0547 Rhodopseudomonas palustris DX-1 MarR family transcriptional regulator YP_004106920.1 589325 R 652103 CDS YP_004106921.1 316931939 10062742 589989..590477 1 NC_014834.1 PFAM: ferric-uptake regulator; KEGG: nha:Nham_0618 ferric uptake regulator family protein; Fur family ferric uptake regulator 590477 10062742 Rpdx1_0548 Rhodopseudomonas palustris DX-1 Fur family ferric uptake regulator YP_004106921.1 589989 D 652103 CDS YP_004106922.1 316931940 10062743 590643..591566 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr0935 hypothetical protein; hypothetical protein 591566 10062743 Rpdx1_0549 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106922.1 590643 D 652103 CDS YP_004106923.1 316931941 10062744 591580..592875 1 NC_014834.1 KEGG: bja:blr0936 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 592875 10062744 Rpdx1_0550 Rhodopseudomonas palustris DX-1 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_004106923.1 591580 D 652103 CDS YP_004106924.1 316931942 10062745 complement(593219..593326) 1 NC_014834.1 hypothetical protein 593326 10062745 Rpdx1_0551 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106924.1 593219 R 652103 CDS YP_004106925.1 316931943 10062746 593407..595068 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: met:M446_1827 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 595068 10062746 Rpdx1_0552 Rhodopseudomonas palustris DX-1 diguanylate cyclase/phosphodiesterase YP_004106925.1 593407 D 652103 CDS YP_004106926.1 316931944 10062747 595086..595529 1 NC_014834.1 PFAM: BLUF domain protein; KEGG: mch:Mchl_4401 BLUF domain protein; BLUF domain-containing protein 595529 10062747 Rpdx1_0553 Rhodopseudomonas palustris DX-1 BLUF domain-containing protein YP_004106926.1 595086 D 652103 CDS YP_004106927.1 316931945 10062748 complement(595540..596466) 1 NC_014834.1 PFAM: Polyprenyl synthetase; KEGG: bja:bll0946 geranyltranstransferase; polyprenyl synthetase 596466 10062748 Rpdx1_0554 Rhodopseudomonas palustris DX-1 polyprenyl synthetase YP_004106927.1 595540 R 652103 CDS YP_004106928.1 316931946 10062749 596567..597271 1 NC_014834.1 KEGG: nha:Nham_0624 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; monofunctional biosynthetic peptidoglycan transglycosylase 597271 10062749 Rpdx1_0555 Rhodopseudomonas palustris DX-1 monofunctional biosynthetic peptidoglycan transglycosylase YP_004106928.1 596567 D 652103 CDS YP_004106929.1 316931947 10062750 597433..597615 1 NC_014834.1 KEGG: bra:BRADO0557 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; 50S ribosomal protein L32 597615 10062750 Rpdx1_0556 Rhodopseudomonas palustris DX-1 50S ribosomal protein L32 YP_004106929.1 597433 D 652103 CDS YP_004106930.1 316931948 10062751 597866..598504 1 NC_014834.1 KEGG: bbt:BBta_7618 hypothetical protein; hypothetical protein 598504 10062751 Rpdx1_0557 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106930.1 597866 D 652103 CDS YP_004106931.1 316931949 10062752 complement(598525..598839) 1 NC_014834.1 KEGG: nha:Nham_0627 hypothetical protein; hypothetical protein 598839 10062752 Rpdx1_0558 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106931.1 598525 R 652103 CDS YP_004106932.1 316931950 10062753 599078..600148 1 NC_014834.1 KEGG: bja:blr0951 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 600148 10062753 Rpdx1_0559 Rhodopseudomonas palustris DX-1 diguanylate phosphodiesterase YP_004106932.1 599078 D 652103 CDS YP_004106933.1 316931951 10062754 complement(600425..601015) 1 NC_014834.1 KEGG: bbt:BBta_7615 putative polyhydroxyalkanoate synthesis repressor PhaR-like protein; TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein; polyhydroxyalkonate synthesis repressor PhaR 601015 10062754 Rpdx1_0560 Rhodopseudomonas palustris DX-1 polyhydroxyalkonate synthesis repressor PhaR YP_004106933.1 600425 R 652103 CDS YP_004106934.1 316931952 10062755 601287..602465 1 NC_014834.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bja:bll0226 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 602465 10062755 Rpdx1_0561 Rhodopseudomonas palustris DX-1 acetyl-CoA acetyltransferase YP_004106934.1 601287 D 652103 CDS YP_004106935.1 316931953 10062756 602647..603372 1 NC_014834.1 KEGG: bja:bll0225 acetoacetyl CoA reductase; TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; acetoacetyl-CoA reductase 603372 10062756 Rpdx1_0562 Rhodopseudomonas palustris DX-1 acetoacetyl-CoA reductase YP_004106935.1 602647 D 652103 CDS YP_004106936.1 316931954 10062757 603449..604315 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_3690 hypothetical protein; hypothetical protein 604315 10062757 Rpdx1_0563 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106936.1 603449 D 652103 CDS YP_004106937.1 316931955 10062758 complement(604353..604871) 1 NC_014834.1 KEGG: bbt:BBta_7351 putative protease; putative protease 604871 10062758 Rpdx1_0564 Rhodopseudomonas palustris DX-1 putative protease YP_004106937.1 604353 R 652103 CDS YP_004106938.1 316931956 10062759 complement(605002..607698) 1 NC_014834.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; KEGG: bbt:BBta_7352 ATP-dependent helicase; SMART: helicase domain protein; DEAD-like helicase; ATP-dependent helicase HrpB 607698 10062759 Rpdx1_0565 Rhodopseudomonas palustris DX-1 ATP-dependent helicase HrpB YP_004106938.1 605002 R 652103 CDS YP_004106939.1 316931957 10062760 607772..608824 1 NC_014834.1 PFAM: acyltransferase 3; KEGG: bbt:BBta_7354 hypothetical protein; acyltransferase 3 608824 10062760 Rpdx1_0566 Rhodopseudomonas palustris DX-1 acyltransferase 3 YP_004106939.1 607772 D 652103 CDS YP_004106940.1 316931958 10062762 609266..611254 1 NC_014834.1 PFAM: TRAG family protein; KEGG: mes:Meso_0515 conjugal transfer coupling protein TraG; TRAG family protein 611254 10062762 Rpdx1_0568 Rhodopseudomonas palustris DX-1 TRAG family protein YP_004106940.1 609266 D 652103 CDS YP_004106941.1 316931959 10062763 611261..611686 1 NC_014834.1 KEGG: mes:Meso_0514 helix-turn-helix protein, CopG; helix-turn-helix domain-containing protein 611686 10062763 Rpdx1_0569 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004106941.1 611261 D 652103 CDS YP_004106942.1 316931960 10062764 611820..613148 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3355 hypothetical protein; major facilitator superfamily protein 613148 10062764 Rpdx1_0570 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004106942.1 611820 D 652103 CDS YP_004106943.1 316931961 10062765 613317..614291 1 NC_014834.1 manually curated; TIGRFAM: P-type conjugative transfer ATPase TrbB; KEGG: bbt:BBta_7741 conjugal transfer protein TrbB; PFAM: type II secretion system protein E; P-type conjugative transfer ATPase TrbB 614291 10062765 Rpdx1_0571 Rhodopseudomonas palustris DX-1 P-type conjugative transfer ATPase TrbB YP_004106943.1 613317 D 652103 CDS YP_004106944.1 316931962 10062766 614293..614616 1 NC_014834.1 PFAM: Conjugal transfer protein TrbC; KEGG: pzu:PHZ_c1513 conjugal transfer protein; conjugal transfer protein TrbC 614616 10062766 Rpdx1_0572 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbC YP_004106944.1 614293 D 652103 CDS YP_004106945.1 316931963 10062767 614616..614879 1 NC_014834.1 KEGG: bbt:BBta_1502 conjugal transfer protein TrbD; conjugal transfer protein TrbD 614879 10062767 Rpdx1_0573 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbD YP_004106945.1 614616 D 652103 CDS YP_004106946.1 316931964 10062768 614890..617331 1 NC_014834.1 KEGG: bbt:BBta_1503 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase; type IV transporter subunit CagE/TrbE/VirB 617331 10062768 Rpdx1_0574 Rhodopseudomonas palustris DX-1 type IV transporter subunit CagE/TrbE/VirB YP_004106946.1 614890 D 652103 CDS YP_004106947.1 316931965 10062769 617328..618056 1 NC_014834.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: bbt:BBta_3368 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ 618056 10062769 Rpdx1_0575 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbJ YP_004106947.1 617328 D 652103 CDS YP_004106948.1 316931966 10062770 618424..619647 1 NC_014834.1 KEGG: bbt:BBta_1505 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL 619647 10062770 Rpdx1_0576 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbL YP_004106948.1 618424 D 652103 CDS YP_004106949.1 316931967 10062771 619748..620431 1 NC_014834.1 KEGG: bja:blr1618 conjugal transfer protein TrbF; conjugal transfer protein TrbF 620431 10062771 Rpdx1_0577 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbF YP_004106949.1 619748 D 652103 CDS YP_004106950.1 316931968 10062772 620428..621462 1 NC_014834.1 KEGG: bja:blr1619 conjugal transfer protein; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 621462 10062772 Rpdx1_0578 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbG YP_004106950.1 620428 D 652103 CDS YP_004106951.1 316931969 10062773 621459..622670 1 NC_014834.1 PFAM: conjugation TrbI family protein; KEGG: bja:blr1620 conjugal transfer protein; conjugation TrbI family protein 622670 10062773 Rpdx1_0579 Rhodopseudomonas palustris DX-1 conjugation TrbI family protein YP_004106951.1 621459 D 652103 CDS YP_004106952.1 316931970 10062774 622679..622918 1 NC_014834.1 PFAM: Protein of unknown function DUF2274; KEGG: bja:bsr1621 hypothetical protein; hypothetical protein 622918 10062774 Rpdx1_0580 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106952.1 622679 D 652103 CDS YP_004106953.1 316931971 10062775 complement(622891..623847) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_1510 LysR family transcriptional regulator; LysR family transcriptional regulator 623847 10062775 Rpdx1_0581 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004106953.1 622891 R 652103 CDS YP_004106954.1 316931972 10062776 complement(623907..624536) 1 NC_014834.1 KEGG: mlo:mlr6385 conjugation factor synthase TraI; PFAM: autoinducer synthesis protein; acyl-homoserine-lactone synthase 624536 10062776 Rpdx1_0582 Rhodopseudomonas palustris DX-1 acyl-homoserine-lactone synthase YP_004106954.1 623907 R 652103 CDS YP_004106955.1 316931973 10062777 complement(624618..625346) 1 NC_014834.1 manually curated; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; KEGG: mlo:mlr6102 transcriptional regulator; SMART: regulatory protein LuxR; autoinducer-binding domain-containing protein 625346 10062777 Rpdx1_0583 Rhodopseudomonas palustris DX-1 autoinducer-binding domain-containing protein YP_004106955.1 624618 R 652103 CDS YP_004106956.1 316931974 10062778 complement(625677..627269) 1 NC_014834.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: cti:RALTA_B1332 FAD flavoprotein oxidoreductase; glucose-methanol-choline oxidoreductase 627269 10062778 Rpdx1_0584 Rhodopseudomonas palustris DX-1 glucose-methanol-choline oxidoreductase YP_004106956.1 625677 R 652103 CDS YP_004106957.1 316931975 10062779 627441..627581 1 NC_014834.1 hypothetical protein 627581 10062779 Rpdx1_0585 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106957.1 627441 D 652103 CDS YP_004106958.1 316931976 10062780 complement(627578..628825) 1 NC_014834.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A1310 alpha-methylacyl-CoA racemase; L-carnitine dehydratase/bile acid-inducible protein F 628825 10062780 Rpdx1_0586 Rhodopseudomonas palustris DX-1 L-carnitine dehydratase/bile acid-inducible protein F YP_004106958.1 627578 R 652103 CDS YP_004106959.1 316931977 10062782 630140..631501 1 NC_014834.1 PFAM: extracellular solute-binding protein family 1; KEGG: vei:Veis_1879 extracellular solute-binding protein; family 1 extracellular solute-binding protein 631501 10062782 Rpdx1_0588 Rhodopseudomonas palustris DX-1 family 1 extracellular solute-binding protein YP_004106959.1 630140 D 652103 CDS YP_004106960.1 316931978 10062783 631534..632406 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_1880 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 632406 10062783 Rpdx1_0589 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106960.1 631534 D 652103 CDS YP_004106961.1 316931979 10062784 632403..633389 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_1881 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 633389 10062784 Rpdx1_0590 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106961.1 632403 D 652103 CDS YP_004106962.1 316931980 10062785 complement(633477..634205) 1 NC_014834.1 KEGG: oca:OCAR_5301 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 634205 10062785 Rpdx1_0591 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004106962.1 633477 R 652103 CDS YP_004106963.1 316931981 10062786 634408..635793 1 NC_014834.1 KEGG: nha:Nham_1482 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; glutathione-disulfide reductase 635793 10062786 Rpdx1_0592 Rhodopseudomonas palustris DX-1 glutathione-disulfide reductase YP_004106963.1 634408 D 652103 CDS YP_004106964.1 316931982 10062787 636009..637565 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bgl:bglu_1g29230 AMP-binding domain protein; AMP-dependent synthetase and ligase 637565 10062787 Rpdx1_0593 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004106964.1 636009 D 652103 CDS YP_004106965.1 316931983 10062788 637591..639045 1 NC_014834.1 PFAM: Aldehyde Dehydrogenase; KEGG: oca:OCAR_7071 succinate-semialdehyde dehydrogenase [NADP+] (ssdh); aldehyde dehydrogenase 639045 10062788 Rpdx1_0594 Rhodopseudomonas palustris DX-1 aldehyde dehydrogenase YP_004106965.1 637591 D 652103 CDS YP_004106966.1 316931984 10062789 639173..640042 1 NC_014834.1 KEGG: pla:Plav_1965 hypothetical protein; hypothetical protein 640042 10062789 Rpdx1_0595 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106966.1 639173 D 652103 CDS YP_004106967.1 316931985 10062790 640130..641566 1 NC_014834.1 PFAM: FAD linked oxidase domain protein; KEGG: ret:RHE_CH00808 glycolate oxidase subunit D protein; FAD linked oxidase domain-containing protein 641566 10062790 Rpdx1_0596 Rhodopseudomonas palustris DX-1 FAD linked oxidase domain-containing protein YP_004106967.1 640130 D 652103 CDS YP_004106968.1 316931986 10062791 641582..642772 1 NC_014834.1 PFAM: FAD linked oxidase domain protein; KEGG: mno:Mnod_0677 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 642772 10062791 Rpdx1_0597 Rhodopseudomonas palustris DX-1 FAD linked oxidase domain-containing protein YP_004106968.1 641582 D 652103 CDS YP_004106969.1 316931987 10062792 642789..644096 1 NC_014834.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mno:Mnod_0680 protein of unknown function DUF224 cysteine-rich region domain protein; hypothetical protein 644096 10062792 Rpdx1_0598 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106969.1 642789 D 652103 CDS YP_004106970.1 316931988 10062793 complement(644124..645164) 1 NC_014834.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: rme:Rmet_4580 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 645164 10062793 Rpdx1_0599 Rhodopseudomonas palustris DX-1 oligopeptide/dipeptide ABC transporter ATPase YP_004106970.1 644124 R 652103 CDS YP_004106971.1 316931989 10062794 complement(645161..646159) 1 NC_014834.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: reh:H16_B0717 ABC transporter ATPase; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 646159 10062794 Rpdx1_0600 Rhodopseudomonas palustris DX-1 oligopeptide/dipeptide ABC transporter ATPase YP_004106971.1 645161 R 652103 CDS YP_004106972.1 316931990 10062795 complement(646163..647860) 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: rme:Rmet_4578 extracellular solute-binding protein; family 5 extracellular solute-binding protein 647860 10062795 Rpdx1_0601 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004106972.1 646163 R 652103 CDS YP_004106973.1 316931991 10062796 complement(647894..648796) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B0719 ABC transporter permease; binding-protein-dependent transporter inner membrane component 648796 10062796 Rpdx1_0602 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106973.1 647894 R 652103 CDS YP_004106974.1 316931992 10062797 complement(648800..649756) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B0720 ABC transporter permease; binding-protein-dependent transporter inner membrane component 649756 10062797 Rpdx1_0603 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004106974.1 648800 R 652103 CDS YP_004106975.1 316931993 10062798 650128..651780 1 NC_014834.1 PFAM: FAD linked oxidase domain protein; KEGG: pol:Bpro_5107 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 651780 10062798 Rpdx1_0604 Rhodopseudomonas palustris DX-1 FAD linked oxidase domain-containing protein YP_004106975.1 650128 D 652103 CDS YP_004106976.1 316931994 10062799 651793..652473 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bam:Bamb_2266 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein 652473 10062799 Rpdx1_0605 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004106976.1 651793 D 652103 CDS YP_004106977.1 316931995 10062800 652509..652850 1 NC_014834.1 KEGG: bbr:BB0279 ferredoxin; manually curated; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Rieske (2Fe-2S) iron-sulfur domain 652850 10062800 Rpdx1_0606 Rhodopseudomonas palustris DX-1 Rieske (2Fe-2S) iron-sulfur domain YP_004106977.1 652509 D 652103 CDS YP_004106978.1 316931996 10062801 652954..654369 1 NC_014834.1 PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; Rieske [2Fe-2S] iron-sulphur domain; KEGG: nar:Saro_1680 ring hydroxylating dioxygenase, alpha subunit; aromatic-ring-hydroxylating dioxygenase subunit alpha-like protein 654369 10062801 Rpdx1_0607 Rhodopseudomonas palustris DX-1 aromatic-ring-hydroxylating dioxygenase subunit alpha-like protein YP_004106978.1 652954 D 652103 CDS YP_004106979.1 316931997 10062802 654379..654879 1 NC_014834.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: nar:Saro_1681 aromatic-ring-hydroxylating dioxygenase, beta subunit; aromatic-ring-hydroxylating dioxygenase subunit beta 654879 10062802 Rpdx1_0608 Rhodopseudomonas palustris DX-1 aromatic-ring-hydroxylating dioxygenase subunit beta YP_004106979.1 654379 D 652103 CDS YP_004106980.1 316931998 10062803 655026..656207 1 NC_014834.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mlo:mll9218 putative ferredoxin reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 656207 10062803 Rpdx1_0609 Rhodopseudomonas palustris DX-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004106980.1 655026 D 652103 CDS YP_004106981.1 316931999 10062804 complement(656666..657142) 1 NC_014834.1 manually curated; KEGG: dol:Dole_2089 hypothetical protein; hypothetical protein 657142 10062804 Rpdx1_0610 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106981.1 656666 R 652103 CDS YP_004106982.1 316932000 10062805 complement(657143..658342) 1 NC_014834.1 KEGG: dol:Dole_2090 hypothetical protein; hypothetical protein 658342 10062805 Rpdx1_0611 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106982.1 657143 R 652103 CDS YP_004106983.1 316932001 10062806 complement(658339..659355) 1 NC_014834.1 KEGG: cyc:PCC7424_5594 patatin; manually curated; PFAM: Patatin; patatin 659355 10062806 Rpdx1_0612 Rhodopseudomonas palustris DX-1 patatin YP_004106983.1 658339 R 652103 CDS YP_004106984.1 316932002 10062807 complement(659361..659585) 1 NC_014834.1 KEGG: cak:Caul_1158 hypothetical protein; hypothetical protein 659585 10062807 Rpdx1_0613 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106984.1 659361 R 652103 CDS YP_004106985.1 316932003 10062808 659720..660034 1 NC_014834.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: bac:BamMC406_6747 XRE family transcriptional regulator; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 660034 10062808 Rpdx1_0614 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004106985.1 659720 D 652103 CDS YP_004106986.1 316932004 10062809 660045..660926 1 NC_014834.1 PFAM: protein of unknown function DUF955; KEGG: xau:Xaut_0551 hypothetical protein; hypothetical protein 660926 10062809 Rpdx1_0615 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106986.1 660045 D 652103 CDS YP_004106987.1 316932005 10062810 complement(661372..662742) 1 NC_014834.1 PFAM: integrase family protein; KEGG: mlo:mll6432 symbiosis island integrase; integrase family protein 662742 10062810 Rpdx1_0616 Rhodopseudomonas palustris DX-1 integrase family protein YP_004106987.1 661372 R 652103 CDS YP_004106988.1 316932006 10062812 663206..663751 1 NC_014834.1 KEGG: nha:Nham_3497 disulphide bond formation protein DsbB; disulfide bond formation protein DsbB 663751 10062812 Rpdx1_0617 Rhodopseudomonas palustris DX-1 disulfide bond formation protein DsbB YP_004106988.1 663206 D 652103 CDS YP_004106989.1 316932007 10062813 663917..665122 1 NC_014834.1 KEGG: bja:bll6988 hypothetical protein; PFAM: histidine kinase dimerisation/phosphoacceptor; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein; signal transduction histidine kinase 665122 10062813 Rpdx1_0618 Rhodopseudomonas palustris DX-1 signal transduction histidine kinase YP_004106989.1 663917 D 652103 CDS YP_004106990.1 316932008 10062814 665196..665573 1 NC_014834.1 KEGG: mlo:mll9592 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 665573 10062814 Rpdx1_0619 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004106990.1 665196 D 652103 CDS YP_004106991.1 316932009 10062815 665679..666392 1 NC_014834.1 PFAM: PRC-barrel domain protein; KEGG: mlo:mlr9581 hypothetical protein; PRC-barrel domain-containing protein 666392 10062815 Rpdx1_0620 Rhodopseudomonas palustris DX-1 PRC-barrel domain-containing protein YP_004106991.1 665679 D 652103 CDS YP_004106992.1 316932010 10062816 complement(666435..667514) 1 NC_014834.1 KEGG: bja:bll1341 hypothetical protein; TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; hypothetical protein 667514 10062816 Rpdx1_0621 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106992.1 666435 R 652103 CDS YP_004106993.1 316932011 10062817 667683..668264 1 NC_014834.1 KEGG: bra:BRADO6543 putative signal peptide; hypothetical protein 668264 10062817 Rpdx1_0622 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106993.1 667683 D 652103 CDS YP_004106994.1 316932012 10062818 668412..668795 1 NC_014834.1 PFAM: LrgA family protein; KEGG: bja:blr1347 hypothetical protein; LrgA family protein 668795 10062818 Rpdx1_0623 Rhodopseudomonas palustris DX-1 LrgA family protein YP_004106994.1 668412 D 652103 CDS YP_004106995.1 316932013 10062819 668792..669514 1 NC_014834.1 PFAM: LrgB family protein; KEGG: bja:blr1348 hypothetical protein; LrgB family protein 669514 10062819 Rpdx1_0624 Rhodopseudomonas palustris DX-1 LrgB family protein YP_004106995.1 668792 D 652103 CDS YP_004106996.1 316932014 10062820 669607..670071 1 NC_014834.1 KEGG: mrd:Mrad2831_1254 hypothetical protein; hypothetical protein 670071 10062820 Rpdx1_0625 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106996.1 669607 D 652103 CDS YP_004106997.1 316932015 10062821 complement(670075..671151) 1 NC_014834.1 KEGG: bja:bll1350 hypothetical protein; hypothetical protein 671151 10062821 Rpdx1_0626 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106997.1 670075 R 652103 CDS YP_004106998.1 316932016 10062822 671330..672475 1 NC_014834.1 PFAM: protein of unknown function UPF0118; KEGG: bbt:BBta_2998 hypothetical protein; hypothetical protein 672475 10062822 Rpdx1_0627 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004106998.1 671330 D 652103 CDS YP_004106999.1 316932017 10062823 complement(672472..673134) 1 NC_014834.1 TIGRFAM: anti-sigma factor, , ChrR family; KEGG: avi:Avi_0090 anti sigma factor protein; anti-ECFsigma factor ChrR 673134 10062823 Rpdx1_0628 Rhodopseudomonas palustris DX-1 anti-ECFsigma factor ChrR YP_004106999.1 672472 R 652103 CDS YP_004107000.1 316932018 10062824 complement(673131..673718) 1 NC_014834.1 KEGG: rru:Rru_A0722 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 673718 10062824 Rpdx1_0629 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004107000.1 673131 R 652103 CDS YP_004107001.1 316932019 10062825 674108..674209 1 NC_014834.1 hypothetical protein 674209 10062825 Rpdx1_0630 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107001.1 674108 D 652103 CDS YP_004107002.1 316932020 10062826 complement(674314..674922) 1 NC_014834.1 PFAM: Methyltransferase type 12; KEGG: mno:Mnod_2730 methyltransferase type 12; type 12 methyltransferase 674922 10062826 Rpdx1_0631 Rhodopseudomonas palustris DX-1 type 12 methyltransferase YP_004107002.1 674314 R 652103 CDS YP_004107003.1 316932021 10062827 complement(674922..675803) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mrd:Mrad2831_3013 LysR family transcriptional regulator; LysR family transcriptional regulator 675803 10062827 Rpdx1_0632 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107003.1 674922 R 652103 CDS YP_004107004.1 316932022 10062828 675909..677216 1 NC_014834.1 PFAM: sodium:dicarboxylate symporter; KEGG: mrd:Mrad2831_3012 C4-dicarboxylate transporter DctA; sodium:dicarboxylate symporter 677216 10062828 Rpdx1_0633 Rhodopseudomonas palustris DX-1 sodium:dicarboxylate symporter YP_004107004.1 675909 D 652103 CDS YP_004107005.1 316932023 10062829 677257..678096 1 NC_014834.1 KEGG: mrd:Mrad2831_3011 hypothetical protein; TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; allantoin catabolism protein 678096 10062829 Rpdx1_0634 Rhodopseudomonas palustris DX-1 allantoin catabolism protein YP_004107005.1 677257 D 652103 CDS YP_004107006.1 316932024 10062830 678093..678605 1 NC_014834.1 KEGG: mrd:Mrad2831_3010 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase; ureidoglycolate hydrolase 678605 10062830 Rpdx1_0635 Rhodopseudomonas palustris DX-1 ureidoglycolate hydrolase YP_004107006.1 678093 D 652103 CDS YP_004107007.1 316932025 10062831 complement(678649..679269) 1 NC_014834.1 PFAM: Methyltransferase type 11; KEGG: dac:Daci_2653 methyltransferase type 11; type 11 methyltransferase 679269 10062831 Rpdx1_0636 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004107007.1 678649 R 652103 CDS YP_004107008.1 316932026 10062832 complement(679387..679944) 1 NC_014834.1 KEGG: bja:bll1367 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease 679944 10062832 Rpdx1_0637 Rhodopseudomonas palustris DX-1 HNH endonuclease YP_004107008.1 679387 R 652103 CDS YP_004107009.1 316932027 10062833 680225..681223 1 NC_014834.1 KEGG: bja:bll4682 cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; cysteine synthase A 681223 10062833 Rpdx1_0638 Rhodopseudomonas palustris DX-1 cysteine synthase A YP_004107009.1 680225 D 652103 CDS YP_004107010.1 316932028 10062834 complement(681294..682211) 1 NC_014834.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: bja:bll0812 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase 682211 10062834 Rpdx1_0639 Rhodopseudomonas palustris DX-1 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004107010.1 681294 R 652103 CDS YP_004107011.1 316932029 10062835 complement(682282..683199) 1 NC_014834.1 PFAM: Pirin domain protein; KEGG: bja:bll0813 hypothetical protein; Pirin domain-containing protein 683199 10062835 Rpdx1_0640 Rhodopseudomonas palustris DX-1 Pirin domain-containing protein YP_004107011.1 682282 R 652103 CDS YP_004107012.1 316932030 10062836 complement(683351..684769) 1 NC_014834.1 KEGG: oca:OCAR_4530 malonyl-CoA decarboxylase; PFAM: Malonyl-CoA decarboxylase; malonyl-CoA decarboxylase 684769 10062836 Rpdx1_0641 Rhodopseudomonas palustris DX-1 malonyl-CoA decarboxylase YP_004107012.1 683351 R 652103 CDS YP_004107013.1 316932031 10062837 complement(684975..685580) 1 NC_014834.1 PFAM: PAS fold-4 domain protein; KEGG: sma:SAV_698 magnesium or manganese-dependent protein phosphatase; PAS fold-4 domain-containing protein 685580 10062837 Rpdx1_0642 Rhodopseudomonas palustris DX-1 PAS fold-4 domain-containing protein YP_004107013.1 684975 R 652103 CDS YP_004107014.1 316932032 10062838 complement(685660..687024) 1 NC_014834.1 PFAM: MmgE/PrpD family protein; KEGG: bja:bll0816 hypothetical protein; MmgE/PrpD family protein 687024 10062838 Rpdx1_0643 Rhodopseudomonas palustris DX-1 MmgE/PrpD family protein YP_004107014.1 685660 R 652103 CDS YP_004107015.1 316932033 10062839 687195..688307 1 NC_014834.1 KEGG: bbt:BBta_0015 hypothetical protein; hypothetical protein 688307 10062839 Rpdx1_0644 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107015.1 687195 D 652103 CDS YP_004107016.1 316932034 10062840 complement(688315..688776) 1 NC_014834.1 KEGG: alv:Alvin_1734 protein of unknown function DUF2269, transmembrane; hypothetical protein 688776 10062840 Rpdx1_0645 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107016.1 688315 R 652103 CDS YP_004107017.1 316932035 10062841 689023..690180 1 NC_014834.1 TIGRFAM: esterase, PHB depolymerase family; KEGG: bja:blr0899 poly(3-hydroxyalkanoate) depolymerase; esterase, PHB depolymerase family 690180 10062841 Rpdx1_0646 Rhodopseudomonas palustris DX-1 esterase, PHB depolymerase family YP_004107017.1 689023 D 652103 CDS YP_004107018.1 316932036 10062842 690300..690719 1 NC_014834.1 PFAM: protein of unknown function DUF1236; KEGG: nha:Nham_0234 hypothetical protein; hypothetical protein 690719 10062842 Rpdx1_0647 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107018.1 690300 D 652103 CDS YP_004107019.1 316932037 10062843 complement(690792..691769) 1 NC_014834.1 KEGG: bja:blr7666 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 691769 10062843 Rpdx1_0648 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004107019.1 690792 R 652103 CDS YP_004107020.1 316932038 10062844 complement(692004..692672) 1 NC_014834.1 KEGG: bbt:BBta_7673 metallo-hydrolase/oxidoreductase domain-containing protein; metallo-hydrolase/oxidoreductase domain-containing protein 692672 10062844 Rpdx1_0649 Rhodopseudomonas palustris DX-1 metallo-hydrolase/oxidoreductase domain-containing protein YP_004107020.1 692004 R 652103 CDS YP_004107021.1 316932039 10062845 complement(692741..693859) 1 NC_014834.1 SMART: von Willebrand factor type A; KEGG: hch:HCH_00942 von Willebrand factor type A domain-containing protein; von Willebrand factor type A 693859 10062845 Rpdx1_0650 Rhodopseudomonas palustris DX-1 von Willebrand factor type A YP_004107021.1 692741 R 652103 CDS YP_004107022.1 316932040 10062846 694011..694490 1 NC_014834.1 KEGG: nha:Nham_0232 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1052; hypothetical protein 694490 10062846 Rpdx1_0651 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107022.1 694011 D 652103 CDS YP_004107023.1 316932041 10062847 complement(694628..695182) 1 NC_014834.1 KEGG: bja:bll0904 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 695182 10062847 Rpdx1_0652 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004107023.1 694628 R 652103 CDS YP_004107024.1 316932042 10062848 complement(695274..696596) 1 NC_014834.1 KEGG: nwi:Nwi_0110 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 696596 10062848 Rpdx1_0653 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004107024.1 695274 R 652103 CDS YP_004107025.1 316932043 10062849 696870..697667 1 NC_014834.1 KEGG: bja:blr0906 nodulation ATP-binding protein I; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 697667 10062849 Rpdx1_0654 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107025.1 696870 D 652103 CDS YP_004107026.1 316932044 10062850 697664..698494 1 NC_014834.1 PFAM: ABC-2 type transporter; KEGG: bja:blr0907 hypothetical protein; ABC-2 type transporter 698494 10062850 Rpdx1_0655 Rhodopseudomonas palustris DX-1 ABC-2 type transporter YP_004107026.1 697664 D 652103 CDS YP_004107027.1 316932045 10062851 698633..699961 1 NC_014834.1 KEGG: bja:blr0908 hypothetical protein; TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; polyhydroxyalkanoate depolymerase 699961 10062851 Rpdx1_0656 Rhodopseudomonas palustris DX-1 polyhydroxyalkanoate depolymerase YP_004107027.1 698633 D 652103 CDS YP_004107028.1 316932046 10062852 700218..701051 1 NC_014834.1 KEGG: bja:blr0909 hypothetical protein; manually curated; PFAM: protein of unknown function DUF45; hypothetical protein 701051 10062852 Rpdx1_0657 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107028.1 700218 D 652103 CDS YP_004107029.1 316932047 10062853 complement(701323..703572) 1 NC_014834.1 KEGG: nha:Nham_0227 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 703572 10062853 Rpdx1_0658 Rhodopseudomonas palustris DX-1 penicillin-binding protein YP_004107029.1 701323 R 652103 CDS YP_004107030.1 316932048 10062854 703756..704007 1 NC_014834.1 KEGG: bra:BRADO5555 hypothetical protein; hypothetical protein 704007 10062854 Rpdx1_0659 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107030.1 703756 D 652103 CDS YP_004107031.1 316932049 10062855 complement(704042..704254) 1 NC_014834.1 KEGG: afu:AF2218 hypothetical protein; hypothetical protein 704254 10062855 Rpdx1_0660 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107031.1 704042 R 652103 CDS YP_004107032.1 316932050 10062856 complement(704439..705659) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_7651 putative branched-chain amino acid ABC transporter, periplasmic binding protein; extracellular ligand-binding receptor 705659 10062856 Rpdx1_0661 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004107032.1 704439 R 652103 CDS YP_004107033.1 316932051 10062857 complement(705794..706156) 1 NC_014834.1 PFAM: protein of unknown function DUF1304; KEGG: bbt:BBta_7649 hypothetical protein; hypothetical protein 706156 10062857 Rpdx1_0662 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107033.1 705794 R 652103 CDS YP_004107034.1 316932052 10062858 706237..706665 1 NC_014834.1 KEGG: bja:blr0911 hypothetical protein; hypothetical protein 706665 10062858 Rpdx1_0663 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107034.1 706237 D 652103 CDS YP_004107035.1 316932053 10062859 706761..709496 1 NC_014834.1 KEGG: bra:BRADO3478 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; multi-sensor hybrid histidine kinase 709496 10062859 Rpdx1_0664 Rhodopseudomonas palustris DX-1 multi-sensor hybrid histidine kinase YP_004107035.1 706761 D 652103 CDS YP_004107036.1 316932054 10062860 709687..712023 1 NC_014834.1 KEGG: bra:BRADO0672 transcriptional accessory protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Tex-like protein 712023 10062860 Rpdx1_0665 Rhodopseudomonas palustris DX-1 Tex-like protein YP_004107036.1 709687 D 652103 CDS YP_004107037.1 316932055 10062862 complement(713713..714936) 1 NC_014834.1 KEGG: nha:Nham_1938 chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; chromate transporter 714936 10062862 Rpdx1_0667 Rhodopseudomonas palustris DX-1 chromate transporter YP_004107037.1 713713 R 652103 CDS YP_004107038.1 316932056 10062863 complement(714933..715826) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: alv:Alvin_1021 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 715826 10062863 Rpdx1_0668 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004107038.1 714933 R 652103 CDS YP_004107039.1 316932057 10062864 complement(715971..716660) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: ctt:CtCNB1_4790 transcriptional regulator, TetR family; regulatory protein TetR 716660 10062864 Rpdx1_0669 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107039.1 715971 R 652103 CDS YP_004107040.1 316932058 10062865 716756..718423 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rfr:Rfer_0523 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 718423 10062865 Rpdx1_0670 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004107040.1 716756 D 652103 CDS YP_004107041.1 316932059 10062866 complement(718505..719839) 1 NC_014834.1 TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; KEGG: afr:AFE_0524 carboxy-terminal peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 719839 10062866 Rpdx1_0671 Rhodopseudomonas palustris DX-1 carboxyl-terminal protease YP_004107041.1 718505 R 652103 CDS YP_004107042.1 316932060 10062867 complement(719995..722796) 1 NC_014834.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: bja:bll0916 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein; UTP-GlnB uridylyltransferase, GlnD 722796 10062867 Rpdx1_0672 Rhodopseudomonas palustris DX-1 UTP-GlnB uridylyltransferase, GlnD YP_004107042.1 719995 R 652103 CDS YP_004107043.1 316932061 10062868 723020..724261 1 NC_014834.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: bbt:BBta_7590 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ 724261 10062868 Rpdx1_0673 Rhodopseudomonas palustris DX-1 arginine biosynthesis bifunctional protein ArgJ YP_004107043.1 723020 D 652103 CDS YP_004107044.1 316932062 10062869 724461..724862 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: bbt:BBta_7592 putative mutator protein MutT; NUDIX hydrolase 724862 10062869 Rpdx1_0674 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004107044.1 724461 D 652103 CDS YP_004107045.1 316932063 10062870 complement(725072..725896) 1 NC_014834.1 PFAM: Methyltransferase type 11; KEGG: bja:bll0208 methyltransferase; type 11 methyltransferase 725896 10062870 Rpdx1_0675 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004107045.1 725072 R 652103 CDS YP_004107046.1 316932064 10062871 complement(725922..726224) 1 NC_014834.1 KEGG: bbt:BBta_7253 hypothetical protein; hypothetical protein 726224 10062871 Rpdx1_0676 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107046.1 725922 R 652103 CDS YP_004107047.1 316932065 10062872 726327..727142 1 NC_014834.1 PFAM: phosphoribosyltransferase; KEGG: nha:Nham_0480 phosphoribosyltransferase; phosphoribosyltransferase 727142 10062872 Rpdx1_0677 Rhodopseudomonas palustris DX-1 phosphoribosyltransferase YP_004107047.1 726327 D 652103 CDS YP_004107048.1 316932066 10062873 727184..727459 1 NC_014834.1 KEGG: bra:BRADO0582 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 3 727459 10062873 Rpdx1_0678 Rhodopseudomonas palustris DX-1 glutaredoxin 3 YP_004107048.1 727184 D 652103 CDS YP_004107049.1 316932067 10062874 727456..728331 1 NC_014834.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bbt:BBta_7596 putative nitrilase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 728331 10062874 Rpdx1_0679 Rhodopseudomonas palustris DX-1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004107049.1 727456 D 652103 CDS YP_004107050.1 316932068 10062875 728328..728822 1 NC_014834.1 PFAM: protein of unknown function DUF1178; KEGG: bja:blr0212 hypothetical protein; hypothetical protein 728822 10062875 Rpdx1_0680 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107050.1 728328 D 652103 CDS YP_004107051.1 316932069 10062876 728953..729483 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_0476 hypothetical protein; hypothetical protein 729483 10062876 Rpdx1_0681 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107051.1 728953 D 652103 CDS YP_004107052.1 316932070 10062877 complement(729484..730383) 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_0475 hypothetical protein; hypothetical protein 730383 10062877 Rpdx1_0682 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107052.1 729484 R 652103 CDS YP_004107053.1 316932071 10062878 730543..731367 1 NC_014834.1 KEGG: bra:BRADO0882 putative metal-dependent hydrolase; putative metal-dependent hydrolase 731367 10062878 Rpdx1_0683 Rhodopseudomonas palustris DX-1 putative metal-dependent hydrolase YP_004107053.1 730543 D 652103 CDS YP_004107054.1 316932072 10062879 complement(731472..732233) 1 NC_014834.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: bra:BRADO0576 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11; ubiquinone biosynthesis O-methyltransferase 732233 10062879 Rpdx1_0684 Rhodopseudomonas palustris DX-1 ubiquinone biosynthesis O-methyltransferase YP_004107054.1 731472 R 652103 CDS YP_004107055.1 316932073 10062880 732442..733695 1 NC_014834.1 KEGG: bra:BRADO0574 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 733695 10062880 Rpdx1_0685 Rhodopseudomonas palustris DX-1 aspartate kinase YP_004107055.1 732442 D 652103 CDS YP_004107056.1 316932074 10062881 734026..736293 1 NC_014834.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; GAF domain protein; PEP-utilising protein mobile region; KEGG: bja:blr0217 phosphoenolpyruvate-protein phosphotransferase; SMART: GAF domain protein; protein PtsP 736293 10062881 Rpdx1_0686 Rhodopseudomonas palustris DX-1 protein PtsP YP_004107056.1 734026 D 652103 CDS YP_004107057.1 316932075 10062882 736348..737433 1 NC_014834.1 KEGG: bbt:BBta_7604 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 1 737433 10062882 Rpdx1_0687 Rhodopseudomonas palustris DX-1 peptide chain release factor 1 YP_004107057.1 736348 D 652103 CDS YP_004107058.1 316932076 10062883 737430..738299 1 NC_014834.1 manually curated; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; KEGG: nha:Nham_0469 HemK family modification methylase; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase 738299 10062883 Rpdx1_0688 Rhodopseudomonas palustris DX-1 protein-(glutamine-N5) methyltransferase YP_004107058.1 737430 D 652103 CDS YP_004107059.1 316932077 10062884 738751..739455 1 NC_014834.1 KEGG: nha:Nham_0468 hypothetical protein; hypothetical protein 739455 10062884 Rpdx1_0689 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107059.1 738751 D 652103 CDS YP_004107060.1 316932078 10062885 complement(739605..740384) 1 NC_014834.1 PFAM: Methyltransferase type 11; KEGG: oca:OCAR_4101 methyltransferase type 11; type 11 methyltransferase 740384 10062885 Rpdx1_0690 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004107060.1 739605 R 652103 CDS YP_004107061.1 316932079 10062886 740549..741316 1 NC_014834.1 TIGRFAM: hydroxyacylglutathione hydrolase; KEGG: nha:Nham_0466 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 741316 10062886 Rpdx1_0691 Rhodopseudomonas palustris DX-1 hydroxyacylglutathione hydrolase YP_004107061.1 740549 D 652103 CDS YP_004107062.1 316932080 10062887 741313..741744 1 NC_014834.1 PFAM: protein of unknown function DUF985; KEGG: xau:Xaut_2020 hypothetical protein; hypothetical protein 741744 10062887 Rpdx1_0692 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107062.1 741313 D 652103 CDS YP_004107063.1 316932081 10062888 complement(741919..742857) 1 NC_014834.1 PFAM: PfkB domain protein; KEGG: nha:Nham_0460 PfkB; PfkB domain-containing protein 742857 10062888 Rpdx1_0693 Rhodopseudomonas palustris DX-1 PfkB domain-containing protein YP_004107063.1 741919 R 652103 CDS YP_004107064.1 316932082 10062889 complement(742854..743786) 1 NC_014834.1 KEGG: bja:blr8123 MutT/NUDIX family protein; PFAM: NUDIX hydrolase; Zinc ribbon NADH pyrophosphatase; NADH pyrophosphatase-like; NAD(+) diphosphatase 743786 10062889 Rpdx1_0694 Rhodopseudomonas palustris DX-1 NAD(+) diphosphatase YP_004107064.1 742854 R 652103 CDS YP_004107065.1 316932083 10062890 complement(743791..744210) 1 NC_014834.1 PFAM: histidine triad (HIT) protein; KEGG: bbt:BBta_7347 hypothetical protein; histidine triad (HIT) protein 744210 10062890 Rpdx1_0695 Rhodopseudomonas palustris DX-1 histidine triad (HIT) protein YP_004107065.1 743791 R 652103 CDS YP_004107066.1 316932084 10062892 744680..746554 1 NC_014834.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: bja:bll8116 DNA polymerase III subunits gamma and tau; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 746554 10062892 Rpdx1_0696 Rhodopseudomonas palustris DX-1 DNA polymerase III subunits gamma and tau YP_004107066.1 744680 D 652103 CDS YP_004107067.1 316932085 10062893 746576..746896 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: nha:Nham_0463 hypothetical protein; hypothetical protein 746896 10062893 Rpdx1_0697 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107067.1 746576 D 652103 CDS YP_004107068.1 316932086 10062894 747002..747607 1 NC_014834.1 TIGRFAM: recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain protein; KEGG: oca:OCAR_7543 recombination protein RecR; SMART: Toprim sub domain protein; recombination protein RecR 747607 10062894 Rpdx1_0698 Rhodopseudomonas palustris DX-1 recombination protein RecR YP_004107068.1 747002 D 652103 CDS YP_004107069.1 316932087 10062895 747627..748058 1 NC_014834.1 KEGG: bja:bll8113 hypothetical protein; hypothetical protein 748058 10062895 Rpdx1_0699 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107069.1 747627 D 652103 CDS YP_004107070.1 316932088 10062896 complement(748096..749475) 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr8112 hypothetical protein; major facilitator superfamily protein 749475 10062896 Rpdx1_0700 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004107070.1 748096 R 652103 CDS YP_004107071.1 316932089 10062897 complement(749546..750745) 1 NC_014834.1 PFAM: protein of unknown function DUF195; KEGG: bja:blr8110 hypothetical protein; hypothetical protein 750745 10062897 Rpdx1_0701 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107071.1 749546 R 652103 CDS YP_004107072.1 316932090 10062898 750895..751422 1 NC_014834.1 TIGRFAM: peptide deformylase; KEGG: bja:bll8109 peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 751422 10062898 Rpdx1_0702 Rhodopseudomonas palustris DX-1 peptide deformylase YP_004107072.1 750895 D 652103 CDS YP_004107073.1 316932091 10062899 751503..752438 1 NC_014834.1 KEGG: nha:Nham_3694 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase 752438 10062899 Rpdx1_0703 Rhodopseudomonas palustris DX-1 methionyl-tRNA formyltransferase YP_004107073.1 751503 D 652103 CDS YP_004107074.1 316932092 10062900 752551..753288 1 NC_014834.1 TIGRFAM: tRNA pseudouridine synthase A; KEGG: bra:BRADO0772 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 753288 10062900 Rpdx1_0704 Rhodopseudomonas palustris DX-1 tRNA pseudouridine synthase A YP_004107074.1 752551 D 652103 CDS YP_004107075.1 316932093 10062901 complement(753427..754584) 1 NC_014834.1 KEGG: nwi:Nwi_3068 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; succinyl-diaminopimelate desuccinylase 754584 10062901 Rpdx1_0705 Rhodopseudomonas palustris DX-1 succinyl-diaminopimelate desuccinylase YP_004107075.1 753427 R 652103 CDS YP_004107076.1 316932094 10062902 complement(754592..755437) 1 NC_014834.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: nha:Nham_3698 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 755437 10062902 Rpdx1_0706 Rhodopseudomonas palustris DX-1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_004107076.1 754592 R 652103 CDS YP_004107077.1 316932095 10062903 complement(755779..756480) 1 NC_014834.1 KEGG: nha:Nham_3699 pyrimidine 5-nucleotidase; TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; pyrimidine 5'-nucleotidase 756480 10062903 Rpdx1_0707 Rhodopseudomonas palustris DX-1 pyrimidine 5'-nucleotidase YP_004107077.1 755779 R 652103 CDS YP_004107078.1 316932096 10062904 complement(756477..757496) 1 NC_014834.1 KEGG: bja:blr8102 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1036; Peptidoglycan-binding domain 1 protein; hypothetical protein 757496 10062904 Rpdx1_0708 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107078.1 756477 R 652103 CDS YP_004107079.1 316932097 10062905 complement(757583..758479) 1 NC_014834.1 TIGRFAM: acetylglutamate kinase; KEGG: bra:BRADO0779 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 758479 10062905 Rpdx1_0709 Rhodopseudomonas palustris DX-1 acetylglutamate kinase YP_004107079.1 757583 R 652103 CDS YP_004107080.1 316932098 10062906 complement(758593..758967) 1 NC_014834.1 PFAM: protein of unknown function DUF423; KEGG: bbt:BBta_7328 hypothetical protein; hypothetical protein 758967 10062906 Rpdx1_0710 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107080.1 758593 R 652103 CDS YP_004107081.1 316932099 10062907 complement(758967..759617) 1 NC_014834.1 KEGG: bra:BRADO0781 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related; ribosome biogenesis GTP-binding protein YsxC 759617 10062907 Rpdx1_0711 Rhodopseudomonas palustris DX-1 ribosome biogenesis GTP-binding protein YsxC YP_004107081.1 758967 R 652103 CDS YP_004107082.1 316932100 10062908 complement(759778..761655) 1 NC_014834.1 KEGG: bja:blr8098 putative inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60 kDa inner membrane insertion protein; membrane protein insertase 761655 10062908 Rpdx1_0712 Rhodopseudomonas palustris DX-1 membrane protein insertase YP_004107082.1 759778 R 652103 CDS YP_004107083.1 316932101 10062909 complement(761672..762013) 1 NC_014834.1 KEGG: nha:Nham_3704 ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; ribonuclease P protein component 762013 10062909 Rpdx1_0713 Rhodopseudomonas palustris DX-1 ribonuclease P protein component YP_004107083.1 761672 R 652103 CDS YP_004107084.1 316932102 10062911 762514..763992 1 NC_014834.1 KEGG: nha:Nham_3706 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 763992 10062911 Rpdx1_0715 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004107084.1 762514 D 652103 CDS YP_004107085.1 316932103 10062913 764948..766270 1 NC_014834.1 PFAM: pentapeptide repeat protein; KEGG: tel:tll0709 hypothetical protein; pentapeptide repeat-containing protein 766270 10062913 Rpdx1_0716 Rhodopseudomonas palustris DX-1 pentapeptide repeat-containing protein YP_004107085.1 764948 D 652103 CDS YP_004107086.1 316932104 10062914 complement(766425..766553) 1 NC_014834.1 hypothetical protein 766553 10062914 Rpdx1_0717 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107086.1 766425 R 652103 CDS YP_004107087.1 316932105 10062915 766819..767403 1 NC_014834.1 KEGG: cps:CPS_1517 flagellar biosynthesis regulator FlhF; hypothetical protein 767403 10062915 Rpdx1_0718 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107087.1 766819 D 652103 CDS YP_004107088.1 316932106 10062917 complement(768487..769203) 1 NC_014834.1 PFAM: glutamine amidotransferase class-I; KEGG: pde:Pden_1435 glutamine amidotransferase class-I; glutamine amidotransferase 769203 10062917 Rpdx1_0720 Rhodopseudomonas palustris DX-1 glutamine amidotransferase YP_004107088.1 768487 R 652103 CDS YP_004107089.1 316932107 10062918 769426..769965 1 NC_014834.1 PFAM: protein of unknown function DUF1234; KEGG: rlg:Rleg_4455 protein of unknown function DUF1234; hypothetical protein 769965 10062918 Rpdx1_0721 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107089.1 769426 D 652103 CDS YP_004107090.1 316932108 10062919 769967..770617 1 NC_014834.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: azc:AZC_2068 efflux protein; lysine exporter protein LysE/YggA 770617 10062919 Rpdx1_0722 Rhodopseudomonas palustris DX-1 lysine exporter protein LysE/YggA YP_004107090.1 769967 D 652103 CDS YP_004107091.1 316932109 10062920 complement(770635..772008) 1 NC_014834.1 KEGG: zmo:ZMO1944 transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 772008 10062920 Rpdx1_0723 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004107091.1 770635 R 652103 CDS YP_004107092.1 316932110 10062921 772318..773229 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rsp:RSP_1915 LysR family transcriptional regulator; LysR family transcriptional regulator 773229 10062921 Rpdx1_0724 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107092.1 772318 D 652103 CDS YP_004107093.1 316932111 10062922 complement(773259..773753) 1 NC_014834.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: rsh:Rsph17029_0568 cupin 2 domain-containing protein; cupin 773753 10062922 Rpdx1_0725 Rhodopseudomonas palustris DX-1 cupin YP_004107093.1 773259 R 652103 CDS YP_004107094.1 316932112 10062923 complement(773758..774048) 1 NC_014834.1 PFAM: protein of unknown function DUF1330; KEGG: rce:RC1_4047 hypothetical protein; hypothetical protein 774048 10062923 Rpdx1_0726 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107094.1 773758 R 652103 CDS YP_004107095.1 316932113 10062924 complement(774101..774493) 1 NC_014834.1 PFAM: protein of unknown function DUF1486; KEGG: pde:Pden_1443 hypothetical protein; hypothetical protein 774493 10062924 Rpdx1_0727 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107095.1 774101 R 652103 CDS YP_004107096.1 316932114 10062925 774844..775314 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: rce:RC1_4046 thioesterase family protein; thioesterase superfamily protein 775314 10062925 Rpdx1_0728 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004107096.1 774844 D 652103 CDS YP_004107097.1 316932115 10062926 775591..778575 1 NC_014834.1 KEGG: acp:A2cp1_2977 glutamate synthase (NADPH), homotetrameric; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; glutamate synthase 778575 10062926 Rpdx1_0729 Rhodopseudomonas palustris DX-1 glutamate synthase YP_004107097.1 775591 D 652103 CDS YP_004107098.1 316932116 10062927 complement(778599..780632) 1 NC_014834.1 KEGG: bja:blr7973 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 780632 10062927 Rpdx1_0730 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004107098.1 778599 R 652103 CDS YP_004107099.1 316932117 10062928 complement(780699..781313) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: fre:Franean1_3028 TetR family transcriptional regulator; regulatory protein TetR 781313 10062928 Rpdx1_0731 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107099.1 780699 R 652103 CDS YP_004107100.1 316932118 10062929 781460..782491 1 NC_014834.1 PFAM: secretion protein HlyD family protein; KEGG: mpo:Mpop_0535 secretion protein HlyD family protein; secretion protein HlyD family protein 782491 10062929 Rpdx1_0732 Rhodopseudomonas palustris DX-1 secretion protein HlyD family protein YP_004107100.1 781460 D 652103 CDS YP_004107101.1 316932119 10062930 782488..785202 1 NC_014834.1 KEGG: mpo:Mpop_0536 ABC transporter related; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; ABC transporter-like protein 785202 10062930 Rpdx1_0733 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107101.1 782488 D 652103 CDS YP_004107102.1 316932120 10062931 785205..786332 1 NC_014834.1 PFAM: ABC-2 type transporter; KEGG: sil:SPO0109 hypothetical protein; ABC-2 type transporter 786332 10062931 Rpdx1_0734 Rhodopseudomonas palustris DX-1 ABC-2 type transporter YP_004107102.1 785205 D 652103 CDS YP_004107103.1 316932121 10062932 complement(786339..787628) 1 NC_014834.1 KEGG: bja:blr4505 hypothetical protein; hypothetical protein 787628 10062932 Rpdx1_0735 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107103.1 786339 R 652103 CDS YP_004107104.1 316932122 10062933 complement(787798..787983) 1 NC_014834.1 KEGG: bra:BRADO3583 hypothetical protein; hypothetical protein 787983 10062933 Rpdx1_0736 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107104.1 787798 R 652103 CDS YP_004107105.1 316932123 10062934 788127..789005 1 NC_014834.1 KEGG: bja:blr5288 transcriptional regulatory protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 789005 10062934 Rpdx1_0737 Rhodopseudomonas palustris DX-1 IclR family transcriptional regulator YP_004107105.1 788127 D 652103 CDS YP_004107106.1 316932124 10062935 789165..790139 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: bja:blr5289 hypothetical protein; hypothetical protein 790139 10062935 Rpdx1_0738 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107106.1 789165 D 652103 CDS YP_004107107.1 316932125 10062936 complement(790212..790859) 1 NC_014834.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bja:blr1229 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 790859 10062936 Rpdx1_0739 Rhodopseudomonas palustris DX-1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_004107107.1 790212 R 652103 CDS YP_004107108.1 316932126 10062937 complement(790840..791424) 1 NC_014834.1 KEGG: bbt:BBta_5841 putative ATP-binding component, PhnN protein; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 791424 10062937 Rpdx1_0740 Rhodopseudomonas palustris DX-1 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN YP_004107108.1 790840 R 652103 CDS YP_004107109.1 316932127 10062938 complement(791421..792599) 1 NC_014834.1 KEGG: bja:blr1227 phosphonate metabolism protein; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; phosphonate metabolism protein PhnM 792599 10062938 Rpdx1_0741 Rhodopseudomonas palustris DX-1 phosphonate metabolism protein PhnM YP_004107109.1 791421 R 652103 CDS YP_004107110.1 316932128 10062939 complement(792596..793306) 1 NC_014834.1 TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: bja:blr1226 phosphonate uptake transporter ATP-binding protein; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL 793306 10062939 Rpdx1_0742 Rhodopseudomonas palustris DX-1 phosphonate C-P lyase system protein PhnL YP_004107110.1 792596 R 652103 CDS YP_004107111.1 316932129 10062940 complement(793306..794124) 1 NC_014834.1 TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bbt:BBta_5844 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK 794124 10062940 Rpdx1_0743 Rhodopseudomonas palustris DX-1 phosphonate C-P lyase system protein PhnK YP_004107111.1 793306 R 652103 CDS YP_004107112.1 316932130 10062941 complement(794117..794995) 1 NC_014834.1 PFAM: phosphonate metabolism PhnJ; KEGG: bbt:BBta_5845 putative PhnJ protein, phosphonate metabolism; phosphonate metabolism PhnJ 794995 10062941 Rpdx1_0744 Rhodopseudomonas palustris DX-1 phosphonate metabolism PhnJ YP_004107112.1 794117 R 652103 CDS YP_004107113.1 316932131 10062942 complement(794992..796089) 1 NC_014834.1 PFAM: phosphonate metabolism; KEGG: bja:blr1223 phosphonate metabolism protein; phosphonate metabolism protein 796089 10062942 Rpdx1_0745 Rhodopseudomonas palustris DX-1 phosphonate metabolism protein YP_004107113.1 794992 R 652103 CDS YP_004107114.1 316932132 10062943 complement(796093..796695) 1 NC_014834.1 KEGG: bja:blr1222 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; phosphonate C-P lyase system protein PhnH 796695 10062943 Rpdx1_0746 Rhodopseudomonas palustris DX-1 phosphonate C-P lyase system protein PhnH YP_004107114.1 796093 R 652103 CDS YP_004107115.1 316932133 10062944 complement(796698..797267) 1 NC_014834.1 KEGG: bja:blr1221 phosphonate metabolism protein; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; phosphonate C-P lyase system protein PhnG 797267 10062944 Rpdx1_0747 Rhodopseudomonas palustris DX-1 phosphonate C-P lyase system protein PhnG YP_004107115.1 796698 R 652103 CDS YP_004107116.1 316932134 10062945 797283..798011 1 NC_014834.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: bbt:BBta_5849 GntR family transcriptional regulator; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 798011 10062945 Rpdx1_0748 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004107116.1 797283 D 652103 CDS YP_004107117.1 316932135 10062946 complement(798109..798975) 1 NC_014834.1 KEGG: bra:BRADO5363 putative PhnE protein, phosphonate ABC transporter, putative membrane protein; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit 798975 10062946 Rpdx1_0749 Rhodopseudomonas palustris DX-1 phosphonate ABC transporter inner membrane subunit YP_004107117.1 798109 R 652103 CDS YP_004107118.1 316932136 10062947 complement(798972..799853) 1 NC_014834.1 KEGG: xau:Xaut_1320 phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; phosphonate ABC transporter inner membrane subunit 799853 10062947 Rpdx1_0750 Rhodopseudomonas palustris DX-1 phosphonate ABC transporter inner membrane subunit YP_004107118.1 798972 R 652103 CDS YP_004107119.1 316932137 10062948 complement(799922..800830) 1 NC_014834.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: xau:Xaut_1321 phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 800830 10062948 Rpdx1_0751 Rhodopseudomonas palustris DX-1 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_004107119.1 799922 R 652103 CDS YP_004107120.1 316932138 10062949 complement(800940..801752) 1 NC_014834.1 TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: bja:bll7947 phosphonates transport system nucleotide binding/ATPase protein; SMART: AAA ATPase; phosphonate ABC transporter ATPase 801752 10062949 Rpdx1_0752 Rhodopseudomonas palustris DX-1 phosphonate ABC transporter ATPase YP_004107120.1 800940 R 652103 CDS YP_004107121.1 316932139 10062950 801937..802617 1 NC_014834.1 TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: bbt:BBta_5859 putative acetyltransferase; phosphonate metabolism protein 802617 10062950 Rpdx1_0753 Rhodopseudomonas palustris DX-1 phosphonate metabolism protein YP_004107121.1 801937 D 652103 CDS YP_004107122.1 316932140 10062951 802614..803807 1 NC_014834.1 KEGG: bja:blr7949 phosphonate metabolism protein; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; phosphonate metabolism protein PhnM 803807 10062951 Rpdx1_0754 Rhodopseudomonas palustris DX-1 phosphonate metabolism protein PhnM YP_004107122.1 802614 D 652103 CDS YP_004107123.1 316932141 10062952 803830..804534 1 NC_014834.1 KEGG: bja:blr7950 hypothetical protein; TIGRFAM: phosphonate metabolism protein; PFAM: protein of unknown function DUF1045; phosphonate metabolism protein 804534 10062952 Rpdx1_0755 Rhodopseudomonas palustris DX-1 phosphonate metabolism protein YP_004107123.1 803830 D 652103 CDS YP_004107124.1 316932142 10062953 complement(804545..805627) 1 NC_014834.1 KEGG: mpt:Mpe_A3544 hypothetical protein; hypothetical protein 805627 10062953 Rpdx1_0756 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107124.1 804545 R 652103 CDS YP_004107125.1 316932143 10062954 805774..805968 1 NC_014834.1 hypothetical protein 805968 10062954 Rpdx1_0757 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107125.1 805774 D 652103 CDS YP_004107126.1 316932144 10062955 806027..806503 1 NC_014834.1 PFAM: protein of unknown function DUF123; KEGG: rru:Rru_A0067 hypothetical protein; hypothetical protein 806503 10062955 Rpdx1_0758 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107126.1 806027 D 652103 CDS YP_004107127.1 316932145 10062956 complement(806481..806804) 1 NC_014834.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: oca:OCAR_6913 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 806804 10062956 Rpdx1_0759 Rhodopseudomonas palustris DX-1 CutA1 divalent ion tolerance protein YP_004107127.1 806481 R 652103 CDS YP_004107128.1 316932146 10062957 806904..807119 1 NC_014834.1 KEGG: aba:Acid345_1009 hypothetical protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; FmdB family regulatory protein 807119 10062957 Rpdx1_0760 Rhodopseudomonas palustris DX-1 FmdB family regulatory protein YP_004107128.1 806904 D 652103 CDS YP_004107129.1 316932147 10062958 807233..807736 1 NC_014834.1 KEGG: ank:AnaeK_2200 hypothetical protein; hypothetical protein 807736 10062958 Rpdx1_0761 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107129.1 807233 D 652103 CDS YP_004107130.1 316932148 10062959 807908..808396 1 NC_014834.1 PFAM: PEBP family protein; KEGG: pph:Ppha_1458 PEBP family protein; PEBP family protein 808396 10062959 Rpdx1_0762 Rhodopseudomonas palustris DX-1 PEBP family protein YP_004107130.1 807908 D 652103 CDS YP_004107131.1 316932149 10062960 complement(808912..809613) 1 NC_014834.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; KEGG: bbt:BBta_3155 cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase 809613 10062960 Rpdx1_0763 Rhodopseudomonas palustris DX-1 cob(II)yrinic acid a,c-diamide reductase YP_004107131.1 808912 R 652103 CDS YP_004107132.1 316932150 10062961 complement(809610..810665) 1 NC_014834.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 810665 10062961 Rpdx1_0764 Rhodopseudomonas palustris DX-1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_004107132.1 809610 R 652103 CDS YP_004107133.1 316932151 10062962 811067..811498 1 NC_014834.1 PFAM: protein of unknown function DUF1636; KEGG: mrd:Mrad2831_3113 hypothetical protein; hypothetical protein 811498 10062962 Rpdx1_0765 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107133.1 811067 D 652103 CDS YP_004107134.1 316932152 10062963 811495..812025 1 NC_014834.1 KEGG: mag:amb4425 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; adenosylcobinamide-phosphate guanylyltransferase 812025 10062963 Rpdx1_0766 Rhodopseudomonas palustris DX-1 adenosylcobinamide-phosphate guanylyltransferase YP_004107134.1 811495 D 652103 CDS YP_004107135.1 316932153 10062964 812029..813033 1 NC_014834.1 KEGG: mno:Mnod_2148 cobalamin biosynthesis protein CobW; TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; cobalamin biosynthesis protein CobW 813033 10062964 Rpdx1_0767 Rhodopseudomonas palustris DX-1 cobalamin biosynthesis protein CobW YP_004107135.1 812029 D 652103 CDS YP_004107136.1 316932154 10062965 813166..816879 1 NC_014834.1 TIGRFAM: cobaltochelatase, CobN subunit; KEGG: mag:amb4427 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase; cobaltochelatase subunit CobN 816879 10062965 Rpdx1_0768 Rhodopseudomonas palustris DX-1 cobaltochelatase subunit CobN YP_004107136.1 813166 D 652103 CDS YP_004107137.1 316932155 10062966 816876..817502 1 NC_014834.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: rlt:Rleg2_2130 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 817502 10062966 Rpdx1_0769 Rhodopseudomonas palustris DX-1 cob(I)alamin adenosyltransferase YP_004107137.1 816876 D 652103 CDS YP_004107138.1 316932156 10062967 817642..819126 1 NC_014834.1 KEGG: rsq:Rsph17025_0384 cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyric acid synthase CobQ 819126 10062967 Rpdx1_0770 Rhodopseudomonas palustris DX-1 cobyric acid synthase CobQ YP_004107138.1 817642 D 652103 CDS YP_004107139.1 316932157 10062968 complement(819099..820070) 1 NC_014834.1 KEGG: sme:SMc04279 cobalamin biosynthesis protein; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CobD 820070 10062968 Rpdx1_0771 Rhodopseudomonas palustris DX-1 cobalamin biosynthesis protein CobD YP_004107139.1 819099 R 652103 CDS YP_004107140.1 316932158 10062969 complement(820072..820884) 1 NC_014834.1 PFAM: periplasmic binding protein; KEGG: nha:Nham_3728 periplasmic binding protein; periplasmic-binding protein 820884 10062969 Rpdx1_0772 Rhodopseudomonas palustris DX-1 periplasmic-binding protein YP_004107140.1 820072 R 652103 CDS YP_004107141.1 316932159 10062970 820948..821940 1 NC_014834.1 KEGG: rce:RC1_3874 threonine-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; L-threonine-O-3-phosphate decarboxylase 821940 10062970 Rpdx1_0773 Rhodopseudomonas palustris DX-1 L-threonine-O-3-phosphate decarboxylase YP_004107141.1 820948 D 652103 CDS YP_004107142.1 316932160 10062971 complement(821952..822731) 1 NC_014834.1 KEGG: nwi:Nwi_3049 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 822731 10062971 Rpdx1_0774 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107142.1 821952 R 652103 CDS YP_004107143.1 316932161 10062972 complement(822728..823753) 1 NC_014834.1 PFAM: transport system permease protein; KEGG: nha:Nham_3730 transport system permease protein; transporter permease 823753 10062972 Rpdx1_0775 Rhodopseudomonas palustris DX-1 transporter permease YP_004107143.1 822728 R 652103 CDS YP_004107144.1 316932162 10062973 complement(823761..824819) 1 NC_014834.1 KEGG: bmj:BMULJ_01659 high-affinity nickel-transport protein; TIGRFAM: high-affinity nickel-transporter; PFAM: high-affinity nickel-transporter; high-affinity nickel-transporter 824819 10062973 Rpdx1_0776 Rhodopseudomonas palustris DX-1 high-affinity nickel-transporter YP_004107144.1 823761 R 652103 CDS YP_004107145.1 316932163 10062975 complement(825477..826214) 1 NC_014834.1 PFAM: Methyltransferase type 12; KEGG: mlo:mlr1575 hypothetical protein; type 12 methyltransferase 826214 10062975 Rpdx1_0778 Rhodopseudomonas palustris DX-1 type 12 methyltransferase YP_004107145.1 825477 R 652103 CDS YP_004107146.1 316932164 10062976 826367..827590 1 NC_014834.1 KEGG: bid:Bind_3049 hypothetical protein; hypothetical protein 827590 10062976 Rpdx1_0779 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107146.1 826367 D 652103 CDS YP_004107147.1 316932165 10062977 827877..828770 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_3092 LysR family transcriptional regulator; LysR family transcriptional regulator 828770 10062977 Rpdx1_0780 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107147.1 827877 D 652103 CDS YP_004107148.1 316932166 10062978 829062..829532 1 NC_014834.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: bja:bll3138 formate dehydrogenase subunit gamma; NADH dehydrogenase (ubiquinone) 24 kDa subunit 829532 10062978 Rpdx1_0781 Rhodopseudomonas palustris DX-1 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_004107148.1 829062 D 652103 CDS YP_004107149.1 316932167 10062979 829529..831085 1 NC_014834.1 KEGG: bja:bll3137 NADH dehydrogenase I chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 831085 10062979 Rpdx1_0782 Rhodopseudomonas palustris DX-1 NADH dehydrogenase (quinone) YP_004107149.1 829529 D 652103 CDS YP_004107150.1 316932168 10062980 831097..833943 1 NC_014834.1 KEGG: bja:bll3136 formate dehydrogenase alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 833943 10062980 Rpdx1_0783 Rhodopseudomonas palustris DX-1 formate dehydrogenase subunit alpha YP_004107150.1 831097 D 652103 CDS YP_004107151.1 316932169 10062981 833946..834773 1 NC_014834.1 KEGG: bbt:BBta_3088 formate dehydrogenase accessory protein; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; formate dehydrogenase family accessory protein fdhD 834773 10062981 Rpdx1_0784 Rhodopseudomonas palustris DX-1 formate dehydrogenase family accessory protein fdhD YP_004107151.1 833946 D 652103 CDS YP_004107152.1 316932170 10062982 834763..834978 1 NC_014834.1 KEGG: bja:bsl3134 putative NAD-dependent formate dehydrogenase; putative NAD-dependent formate dehydrogenase 834978 10062982 Rpdx1_0785 Rhodopseudomonas palustris DX-1 putative NAD-dependent formate dehydrogenase YP_004107152.1 834763 D 652103 CDS YP_004107153.1 316932171 10062983 835040..836689 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2314 MFS permease; major facilitator superfamily protein 836689 10062983 Rpdx1_0786 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004107153.1 835040 D 652103 CDS YP_004107154.1 316932172 10062984 837140..838393 1 NC_014834.1 KEGG: bja:bll0591 hypothetical protein; hypothetical protein 838393 10062984 Rpdx1_0787 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107154.1 837140 D 652103 CDS YP_004107155.1 316932173 10062985 838627..839211 1 NC_014834.1 PFAM: cytochrome c class I; KEGG: bbt:BBta_0312 putative cytochrome c4 precursor; cytochrome c class I 839211 10062985 Rpdx1_0788 Rhodopseudomonas palustris DX-1 cytochrome c class I YP_004107155.1 838627 D 652103 CDS YP_004107156.1 316932174 10062986 839569..841665 1 NC_014834.1 KEGG: rru:Rru_A1356 catalase; PFAM: Catalase related subgroup; Catalase domain protein; catalase 841665 10062986 Rpdx1_0789 Rhodopseudomonas palustris DX-1 catalase YP_004107156.1 839569 D 652103 CDS YP_004107157.1 316932175 10062987 841820..842941 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: dal:Dalk_4842 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 842941 10062987 Rpdx1_0790 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004107157.1 841820 D 652103 CDS YP_004107158.1 316932176 10062988 842938..843885 1 NC_014834.1 KEGG: bja:blr6138 hypothetical protein; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; ATPase 843885 10062988 Rpdx1_0791 Rhodopseudomonas palustris DX-1 ATPase YP_004107158.1 842938 D 652103 CDS YP_004107159.1 316932177 10062989 843885..845276 1 NC_014834.1 PFAM: VWA containing CoxE family protein; KEGG: bja:blr6139 hypothetical protein; VWA containing CoxE family protein 845276 10062989 Rpdx1_0792 Rhodopseudomonas palustris DX-1 VWA containing CoxE family protein YP_004107159.1 843885 D 652103 CDS YP_004107160.1 316932178 10062990 845450..846976 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0667 putative O-succinylbenzoate--CoA ligase; AMP-dependent synthetase and ligase 846976 10062990 Rpdx1_0793 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004107160.1 845450 D 652103 CDS YP_004107161.1 316932179 10062991 complement(847064..847345) 1 NC_014834.1 KEGG: rso:RSc2290 iron oxidase precursor oxidoreductase protein; iron oxidase oxidoreductase protein 847345 10062991 Rpdx1_0794 Rhodopseudomonas palustris DX-1 iron oxidase oxidoreductase protein YP_004107161.1 847064 R 652103 CDS YP_004107162.1 316932180 10062992 complement(847485..849917) 1 NC_014834.1 TIGRFAM: decaheme-associated outer membrane protein, MtrB/PioB family; KEGG: gem:GM21_0398 hypothetical protein; decaheme-associated outer membrane protein 849917 10062992 Rpdx1_0795 Rhodopseudomonas palustris DX-1 decaheme-associated outer membrane protein YP_004107162.1 847485 R 652103 CDS YP_004107163.1 316932181 10062993 complement(850014..851660) 1 NC_014834.1 TIGRFAM: decaheme c-type cytochrome, DmsE family; cytochrome C family protein; KEGG: nhl:Nhal_1192 cytochrome c family protein; decaheme c-type cytochrome, DmsE family 851660 10062993 Rpdx1_0796 Rhodopseudomonas palustris DX-1 decaheme c-type cytochrome, DmsE family YP_004107163.1 850014 R 652103 CDS YP_004107164.1 316932182 10062994 complement(852208..853254) 1 NC_014834.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: oca:OCAR_7383 sulfate/thiosulfate import ATP-binding protein CysA; SMART: AAA ATPase; sulfate ABC transporter ATPase 853254 10062994 Rpdx1_0797 Rhodopseudomonas palustris DX-1 sulfate ABC transporter ATPase YP_004107164.1 852208 R 652103 CDS YP_004107165.1 316932183 10062995 complement(853244..854125) 1 NC_014834.1 KEGG: nwi:Nwi_2758 sulfate ABC transporter, permease protein CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 854125 10062995 Rpdx1_0798 Rhodopseudomonas palustris DX-1 sulfate ABC transporter permease YP_004107165.1 853244 R 652103 CDS YP_004107166.1 316932184 10062996 complement(854166..855002) 1 NC_014834.1 KEGG: nha:Nham_3559 sulfate ABC transporter, permease protein CysT; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 855002 10062996 Rpdx1_0799 Rhodopseudomonas palustris DX-1 sulfate ABC transporter permease YP_004107166.1 854166 R 652103 CDS YP_004107167.1 316932185 10062997 complement(855336..856325) 1 NC_014834.1 KEGG: oca:OCAR_7386 thiosulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter substrate-binding protein 856325 10062997 Rpdx1_0800 Rhodopseudomonas palustris DX-1 sulfate ABC transporter substrate-binding protein YP_004107167.1 855336 R 652103 CDS YP_004107168.1 316932186 10062998 complement(856450..857190) 1 NC_014834.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: nha:Nham_3561 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 857190 10062998 Rpdx1_0801 Rhodopseudomonas palustris DX-1 phosphoadenosine phosphosulfate reductase YP_004107168.1 856450 R 652103 CDS YP_004107169.1 316932187 10062999 857474..858379 1 NC_014834.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: bbt:BBta_6983 sulfate adenylyltransferase subunit 2; phosphoadenosine phosphosulfate reductase 858379 10062999 Rpdx1_0802 Rhodopseudomonas palustris DX-1 phosphoadenosine phosphosulfate reductase YP_004107169.1 857474 D 652103 CDS YP_004107170.1 316932188 10063000 858401..860311 1 NC_014834.1 TIGRFAM: sulfate adenylyltransferase, large subunit; adenylylsulfate kinase; KEGG: nwi:Nwi_2764 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase large subunit 860311 10063000 Rpdx1_0803 Rhodopseudomonas palustris DX-1 sulfate adenylyltransferase large subunit YP_004107170.1 858401 D 652103 CDS YP_004107171.1 316932189 10063001 complement(860339..861316) 1 NC_014834.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bja:bll7916 ABC transporter ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 861316 10063001 Rpdx1_0804 Rhodopseudomonas palustris DX-1 oligopeptide/dipeptide ABC transporter ATPase YP_004107171.1 860339 R 652103 CDS YP_004107172.1 316932190 10063002 complement(861317..862729) 1 NC_014834.1 PFAM: Amidase; KEGG: bja:bll7917 putative glutamyl-tRNA(Gln) amidotransferase; amidase 862729 10063002 Rpdx1_0805 Rhodopseudomonas palustris DX-1 amidase YP_004107172.1 861317 R 652103 CDS YP_004107173.1 316932191 10063003 complement(862726..862920) 1 NC_014834.1 KEGG: bbt:BBta_7146 hypothetical protein; hypothetical protein 862920 10063003 Rpdx1_0806 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107173.1 862726 R 652103 CDS YP_004107174.1 316932192 10063004 complement(862934..863992) 1 NC_014834.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: bja:bll7918 ABC transporter ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 863992 10063004 Rpdx1_0807 Rhodopseudomonas palustris DX-1 oligopeptide/dipeptide ABC transporter ATPase YP_004107174.1 862934 R 652103 CDS YP_004107175.1 316932193 10063005 complement(863997..864887) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1552 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 864887 10063005 Rpdx1_0808 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004107175.1 863997 R 652103 CDS YP_004107176.1 316932194 10063006 complement(864907..865860) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7920 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 865860 10063006 Rpdx1_0809 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004107176.1 864907 R 652103 CDS YP_004107177.1 316932195 10063007 complement(866057..867718) 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_7150 putative oligopeptide ABC transporter (substrate binding protein); family 5 extracellular solute-binding protein 867718 10063007 Rpdx1_0810 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004107177.1 866057 R 652103 CDS YP_004107178.1 316932196 10063008 867906..869507 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: bja:blr7922 ABC transporter substrate-binding protein; family 5 extracellular solute-binding protein 869507 10063008 Rpdx1_0811 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004107178.1 867906 D 652103 CDS YP_004107179.1 316932197 10063009 complement(869709..870143) 1 NC_014834.1 KEGG: sil:SPO0636 EF hand domain-containing protein; EF hand domain-containing protein 870143 10063009 Rpdx1_0812 Rhodopseudomonas palustris DX-1 EF hand domain-containing protein YP_004107179.1 869709 R 652103 CDS YP_004107180.1 316932198 10063010 complement(870164..872533) 1 NC_014834.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE1205 TonB-dependent receptor protein; TonB-dependent receptor 872533 10063010 Rpdx1_0813 Rhodopseudomonas palustris DX-1 TonB-dependent receptor YP_004107180.1 870164 R 652103 CDS YP_004107181.1 316932199 10063011 872924..873628 1 NC_014834.1 KEGG: mdi:METDI0368 putative transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 873628 10063011 Rpdx1_0814 Rhodopseudomonas palustris DX-1 Crp/Fnr family transcriptional regulator YP_004107181.1 872924 D 652103 CDS YP_004107182.1 316932200 10063012 873787..875205 1 NC_014834.1 KEGG: rsq:Rsph17025_3536 hypothetical protein; hypothetical protein 875205 10063012 Rpdx1_0815 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107182.1 873787 D 652103 CDS YP_004107183.1 316932201 10063013 875383..876324 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: met:M446_6787 diguanylate cyclase/phosphodiesterase; SMART: GGDEF domain containing protein; PAS/PAC sensor -containing diguanylate cyclase 876324 10063013 Rpdx1_0816 Rhodopseudomonas palustris DX-1 PAS/PAC sensor -containing diguanylate cyclase YP_004107183.1 875383 D 652103 CDS YP_004107184.1 316932202 10063015 complement(876858..877250) 1 NC_014834.1 KEGG: cvi:CV_2285 hypothetical protein; hypothetical protein 877250 10063015 Rpdx1_0818 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107184.1 876858 R 652103 CDS YP_004107185.1 316932203 10063016 complement(877309..877800) 1 NC_014834.1 KEGG: sfu:Sfum_1197 hypothetical protein; hypothetical protein 877800 10063016 Rpdx1_0819 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107185.1 877309 R 652103 CDS YP_004107186.1 316932204 10063017 878147..879088 1 NC_014834.1 KEGG: rcu:RCOM_1905080 hypothetical protein; hypothetical protein 879088 10063017 Rpdx1_0820 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107186.1 878147 D 652103 CDS YP_004107187.1 316932205 10063018 879191..879982 1 NC_014834.1 KEGG: reh:PHG265 transmembrane nitrate/nitrite sensor kinase; hypothetical protein 879982 10063018 Rpdx1_0821 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107187.1 879191 D 652103 CDS YP_004107188.1 316932206 10063019 complement(880108..881286) 1 NC_014834.1 manually curated; KEGG: pth:PTH_0722 hypothetical protein; hypothetical protein 881286 10063019 Rpdx1_0822 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107188.1 880108 R 652103 CDS YP_004107189.1 316932207 10063020 complement(881290..883575) 1 NC_014834.1 KEGG: pth:PTH_0723 hypothetical protein; manually curated; PFAM: stem cell self-renewal protein Piwi domain protein; hypothetical protein 883575 10063020 Rpdx1_0823 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107189.1 881290 R 652103 CDS YP_004107190.1 316932208 10063022 886343..886747 1 NC_014834.1 KEGG: oca:OCAR_4017 hypothetical protein; hypothetical protein 886747 10063022 Rpdx1_0825 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107190.1 886343 D 652103 CDS YP_004107191.1 316932209 10063023 886836..887531 1 NC_014834.1 KEGG: bac:BamMC406_2103 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 887531 10063023 Rpdx1_0826 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004107191.1 886836 D 652103 CDS YP_004107192.1 316932210 10063024 888161..888478 1 NC_014834.1 PFAM: protein of unknown function DUF736; KEGG: oca:OCAR_4014 hypothetical protein; hypothetical protein 888478 10063024 Rpdx1_0827 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107192.1 888161 D 652103 CDS YP_004107193.1 316932211 10063025 complement(888547..889197) 1 NC_014834.1 KEGG: mea:Mex_2p0350 hypothetical protein; hypothetical protein 889197 10063025 Rpdx1_0828 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107193.1 888547 R 652103 CDS YP_004107194.1 316932212 10063026 889471..890313 1 NC_014834.1 KEGG: swi:Swit_3678 hypothetical protein; hypothetical protein 890313 10063026 Rpdx1_0829 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107194.1 889471 D 652103 CDS YP_004107195.1 316932213 10063027 890619..890822 1 NC_014834.1 KEGG: mes:Meso_2340 hypothetical protein; hypothetical protein 890822 10063027 Rpdx1_0830 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107195.1 890619 D 652103 CDS YP_004107196.1 316932214 10063028 890893..891402 1 NC_014834.1 KEGG: oca:OCAR_4011 hypothetical protein; hypothetical protein 891402 10063028 Rpdx1_0831 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107196.1 890893 D 652103 CDS YP_004107197.1 316932215 10063029 complement(891405..891710) 1 NC_014834.1 KEGG: mes:Meso_2328 hypothetical protein; hypothetical protein 891710 10063029 Rpdx1_0832 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107197.1 891405 R 652103 CDS YP_004107198.1 316932216 10063030 891844..892065 1 NC_014834.1 KEGG: bbt:BBta_1485 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 892065 10063030 Rpdx1_0833 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004107198.1 891844 D 652103 CDS YP_004107199.1 316932217 10063031 892269..892538 1 NC_014834.1 KEGG: oca:OCAR_4009 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 892538 10063031 Rpdx1_0834 Rhodopseudomonas palustris DX-1 phage transcriptional regulator AlpA YP_004107199.1 892269 D 652103 CDS YP_004107200.1 316932218 10063032 892539..893666 1 NC_014834.1 PFAM: Replication initiator protein A; KEGG: oca:OCAR_4008 replication protein A; replication initiator protein A 893666 10063032 Rpdx1_0835 Rhodopseudomonas palustris DX-1 replication initiator protein A YP_004107200.1 892539 D 652103 CDS YP_004107201.1 316932219 10063033 893663..894181 1 NC_014834.1 KEGG: oca:OCAR_4005 hypothetical protein; hypothetical protein 894181 10063033 Rpdx1_0836 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107201.1 893663 D 652103 CDS YP_004107202.1 316932220 10063034 894178..894723 1 NC_014834.1 KEGG: zmn:Za10_1345 TraF peptidase. serine peptidase MEROPS family S26C; TIGRFAM: conjugative transfer signal peptidase TraF; PFAM: Peptidase S26, conserved region; conjugative transfer signal peptidase TraF 894723 10063034 Rpdx1_0837 Rhodopseudomonas palustris DX-1 conjugative transfer signal peptidase TraF YP_004107202.1 894178 D 652103 CDS YP_004107203.1 316932221 10063035 894791..895126 1 NC_014834.1 PFAM: protein of unknown function DUF736; KEGG: zmn:Za10_1346 protein of unknown function DUF736; hypothetical protein 895126 10063035 Rpdx1_0838 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107203.1 894791 D 652103 CDS YP_004107204.1 316932222 10063036 895131..896054 1 NC_014834.1 PFAM: Lytic transglycosylase catalytic; KEGG: oca:OCAR_4002 lytic transglycosylase, catalytic; lytic transglycosylase 896054 10063036 Rpdx1_0839 Rhodopseudomonas palustris DX-1 lytic transglycosylase YP_004107204.1 895131 D 652103 CDS YP_004107205.1 316932223 10063037 896368..898428 1 NC_014834.1 KEGG: zmn:Za10_1349 hypothetical protein; hypothetical protein 898428 10063037 Rpdx1_0840 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107205.1 896368 D 652103 CDS YP_004107206.1 316932224 10063038 complement(898493..899185) 1 NC_014834.1 KEGG: mno:Mnod_0480 hypothetical protein; hypothetical protein 899185 10063038 Rpdx1_0841 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107206.1 898493 R 652103 CDS YP_004107207.1 316932225 10063039 complement(899212..899709) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: adg:Adeg_1061 transcriptional regulator, TetR family; regulatory protein TetR 899709 10063039 Rpdx1_0842 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107207.1 899212 R 652103 CDS YP_004107208.1 316932226 10063040 899916..900812 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: oca:OCAR_7611 transcriptional regulator, LysR family; LysR family transcriptional regulator 900812 10063040 Rpdx1_0843 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107208.1 899916 D 652103 CDS YP_004107209.1 316932227 10063041 900957..902939 1 NC_014834.1 PFAM: TRAG family protein; KEGG: oca:OCAR_7610 conjugal transfer coupling protein TraG; TRAG family protein 902939 10063041 Rpdx1_0844 Rhodopseudomonas palustris DX-1 TRAG family protein YP_004107209.1 900957 D 652103 CDS YP_004107210.1 316932228 10063042 902950..903414 1 NC_014834.1 KEGG: zmn:Za10_1355 CopG domain protein DNA-binding domain protein; CopG domain-containing/DNA-binding domain-containing protein 903414 10063042 Rpdx1_0845 Rhodopseudomonas palustris DX-1 CopG domain-containing/DNA-binding domain-containing protein YP_004107210.1 902950 D 652103 CDS YP_004107211.1 316932229 10063043 903556..904551 1 NC_014834.1 manually curated; TIGRFAM: P-type conjugative transfer ATPase TrbB; KEGG: oca:OCAR_7608 P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; P-type conjugative transfer ATPase TrbB 904551 10063043 Rpdx1_0846 Rhodopseudomonas palustris DX-1 P-type conjugative transfer ATPase TrbB YP_004107211.1 903556 D 652103 CDS YP_004107212.1 316932230 10063044 904548..904880 1 NC_014834.1 PFAM: Conjugal transfer protein TrbC; KEGG: pla:Plav_3542 conjugal transfer protein TrbC; conjugal transfer protein TrbC 904880 10063044 Rpdx1_0847 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbC YP_004107212.1 904548 D 652103 CDS YP_004107213.1 316932231 10063045 904880..905158 1 NC_014834.1 KEGG: oca:OCAR_7606 conjugal transfer protein TrbB; conjugal transfer protein TrbB 905158 10063045 Rpdx1_0848 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbB YP_004107213.1 904880 D 652103 CDS YP_004107214.1 316932232 10063046 905173..907629 1 NC_014834.1 KEGG: oca:OCAR_7605 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase; type IV transporter subunit CagE/TrbE/VirB 907629 10063046 Rpdx1_0849 Rhodopseudomonas palustris DX-1 type IV transporter subunit CagE/TrbE/VirB YP_004107214.1 905173 D 652103 CDS YP_004107215.1 316932233 10063047 907626..908390 1 NC_014834.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: oca:OCAR_7604 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ 908390 10063047 Rpdx1_0850 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbJ YP_004107215.1 907626 D 652103 CDS YP_004107216.1 316932234 10063048 908401..908688 1 NC_014834.1 KEGG: mes:Meso_2319 hypothetical protein; hypothetical protein 908688 10063048 Rpdx1_0851 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107216.1 908401 D 652103 CDS YP_004107217.1 316932235 10063049 908692..910065 1 NC_014834.1 KEGG: oca:OCAR_4186 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL 910065 10063049 Rpdx1_0852 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbL YP_004107217.1 908692 D 652103 CDS YP_004107218.1 316932236 10063050 910062..910751 1 NC_014834.1 KEGG: oca:OCAR_7601 conjugal transfer protein TrbF; conjugal transfer protein TrbF 910751 10063050 Rpdx1_0853 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbF YP_004107218.1 910062 D 652103 CDS YP_004107219.1 316932237 10063051 910748..911704 1 NC_014834.1 KEGG: oca:OCAR_7600 conjugal transfer protein TrbG/VirB9/CagX; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 911704 10063051 Rpdx1_0854 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbG YP_004107219.1 910748 D 652103 CDS YP_004107220.1 316932238 10063052 911701..912843 1 NC_014834.1 PFAM: conjugation TrbI family protein; KEGG: mes:Meso_0500 conjugation TrbI-like protein; conjugation TrbI family protein 912843 10063052 Rpdx1_0855 Rhodopseudomonas palustris DX-1 conjugation TrbI family protein YP_004107220.1 911701 D 652103 CDS YP_004107221.1 316932239 10063053 912846..913064 1 NC_014834.1 PFAM: Protein of unknown function DUF2274; KEGG: mpo:Mpop_3096 hypothetical protein; hypothetical protein 913064 10063053 Rpdx1_0856 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107221.1 912846 D 652103 CDS YP_004107222.1 316932240 10063054 913227..914081 1 NC_014834.1 manually curated; KEGG: hne:HNE_1724 hypothetical protein; hypothetical protein 914081 10063054 Rpdx1_0857 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107222.1 913227 D 652103 CDS YP_004107223.1 316932241 10063055 914074..917364 1 NC_014834.1 KEGG: bid:Bind_3765 helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 917364 10063055 Rpdx1_0858 Rhodopseudomonas palustris DX-1 DEAD/DEAH box helicase YP_004107223.1 914074 D 652103 CDS YP_004107224.1 316932242 10063056 917606..917923 1 NC_014834.1 KEGG: swi:Swit_3385 hypothetical protein; hypothetical protein 917923 10063056 Rpdx1_0859 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107224.1 917606 D 652103 CDS YP_004107225.1 316932243 10063057 917920..918273 1 NC_014834.1 KEGG: app:CAP2UW1_4477 hypothetical protein; hypothetical protein 918273 10063057 Rpdx1_0860 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107225.1 917920 D 652103 CDS YP_004107226.1 316932244 10063058 918270..918668 1 NC_014834.1 KEGG: sme:SMa2167 hypothetical protein; hypothetical protein 918668 10063058 Rpdx1_0861 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107226.1 918270 D 652103 CDS YP_004107227.1 316932245 10063059 918665..920323 1 NC_014834.1 PFAM: Resolvase domain; Recombinase; KEGG: swi:Swit_3384 resolvase domain-containing protein; resolvase domain-containing protein 920323 10063059 Rpdx1_0862 Rhodopseudomonas palustris DX-1 resolvase domain-containing protein YP_004107227.1 918665 D 652103 CDS YP_004107228.1 316932246 10063060 920519..921841 1 NC_014834.1 PFAM: integrase family protein; KEGG: bbt:BBta_7820 putative phage integrase; integrase family protein 921841 10063060 Rpdx1_0863 Rhodopseudomonas palustris DX-1 integrase family protein YP_004107228.1 920519 D 652103 CDS YP_004107229.1 316932247 10063061 complement(921905..925414) 1 NC_014834.1 KEGG: sjp:SJA_C1-03600 putative helicase; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; DEAD/DEAH box helicase 925414 10063061 Rpdx1_0864 Rhodopseudomonas palustris DX-1 DEAD/DEAH box helicase YP_004107229.1 921905 R 652103 CDS YP_004107230.1 316932248 10063062 complement(925401..926183) 1 NC_014834.1 KEGG: sjp:SJA_C1-03610 hypothetical protein; hypothetical protein 926183 10063062 Rpdx1_0865 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107230.1 925401 R 652103 CDS YP_004107231.1 316932249 10063063 complement(926170..926955) 1 NC_014834.1 KEGG: gox:GOX1507 putative restriction endonuclease; putative restriction endonuclease 926955 10063063 Rpdx1_0866 Rhodopseudomonas palustris DX-1 putative restriction endonuclease YP_004107231.1 926170 R 652103 CDS YP_004107232.1 316932250 10063064 complement(926952..928916) 1 NC_014834.1 KEGG: pde:Pden_1524 putative chromosome segregation SMC protein; putative chromosome segregation SMC protein 928916 10063064 Rpdx1_0867 Rhodopseudomonas palustris DX-1 putative chromosome segregation SMC protein YP_004107232.1 926952 R 652103 CDS YP_004107233.1 316932251 10063065 complement(928906..933369) 1 NC_014834.1 KEGG: pde:Pden_1525 hypothetical protein; hypothetical protein 933369 10063065 Rpdx1_0868 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107233.1 928906 R 652103 CDS YP_004107234.1 316932252 10063066 complement(933373..936138) 1 NC_014834.1 KEGG: gox:GOX1504 ATP-dependent helicase HepA; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; helicase domain-containing protein 936138 10063066 Rpdx1_0869 Rhodopseudomonas palustris DX-1 helicase domain-containing protein YP_004107234.1 933373 R 652103 CDS YP_004107235.1 316932253 10063067 complement(936143..941314) 1 NC_014834.1 KEGG: gox:GOX1503 ATP-dependent helicase Lhr; PFAM: Protein of unknown function DUF1998; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; hypothetical protein 941314 10063067 Rpdx1_0870 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107235.1 936143 R 652103 CDS YP_004107236.1 316932254 10063070 complement(941961..942833) 1 NC_014834.1 PFAM: Domain of unknown function DUF1814; KEGG: smd:Smed_5454 hypothetical protein; hypothetical protein 942833 10063070 Rpdx1_0873 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107236.1 941961 R 652103 CDS YP_004107237.1 316932255 10063071 complement(942826..943443) 1 NC_014834.1 KEGG: smd:Smed_5453 hypothetical protein; hypothetical protein 943443 10063071 Rpdx1_0874 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107237.1 942826 R 652103 CDS YP_004107238.1 316932256 10063072 943755..944717 1 NC_014834.1 PFAM: domain of unknown function DUF1738; KEGG: bbt:BBta_7394 putative ArdC antirestriction protein; hypothetical protein 944717 10063072 Rpdx1_0875 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107238.1 943755 D 652103 CDS YP_004107239.1 316932257 10063073 944714..945085 1 NC_014834.1 KEGG: nwi:Nwi_2122 hypothetical protein; hypothetical protein 945085 10063073 Rpdx1_0876 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107239.1 944714 D 652103 CDS YP_004107240.1 316932258 10063074 945265..947388 1 NC_014834.1 KEGG: bja:bll0065 putative DNA-binding protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; ParB domain-containing protein nuclease 947388 10063074 Rpdx1_0877 Rhodopseudomonas palustris DX-1 ParB domain-containing protein nuclease YP_004107240.1 945265 D 652103 CDS YP_004107241.1 316932259 10063075 947457..948521 1 NC_014834.1 KEGG: gdj:Gdia_2785 hypothetical protein; hypothetical protein 948521 10063075 Rpdx1_0878 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107241.1 947457 D 652103 CDS YP_004107242.1 316932260 10063076 948845..949765 1 NC_014834.1 PFAM: Protein of unknown function DUF2493; KEGG: mes:Meso_0533 hypothetical protein; hypothetical protein 949765 10063076 Rpdx1_0879 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107242.1 948845 D 652103 CDS YP_004107243.1 316932261 10063077 complement(949915..950187) 1 NC_014834.1 KEGG: mlo:msl1988 hypothetical protein; hypothetical protein 950187 10063077 Rpdx1_0880 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107243.1 949915 R 652103 CDS YP_004107244.1 316932262 10063078 950416..950733 1 NC_014834.1 KEGG: mes:Meso_4060 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 950733 10063078 Rpdx1_0881 Rhodopseudomonas palustris DX-1 regulatory protein ArsR YP_004107244.1 950416 D 652103 CDS YP_004107245.1 316932263 10063079 950730..951215 1 NC_014834.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mkm:Mkms_3597 activator of HSP90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 951215 10063079 Rpdx1_0882 Rhodopseudomonas palustris DX-1 Activator of Hsp90 ATPase 1 family protein YP_004107245.1 950730 D 652103 CDS YP_004107246.1 316932264 10063080 951858..952394 1 NC_014834.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ara:Arad_9899 bifunctional deaminase-reductase, C-terminal; bifunctional deaminase-reductase domain-containing protein 952394 10063080 Rpdx1_0883 Rhodopseudomonas palustris DX-1 bifunctional deaminase-reductase domain-containing protein YP_004107246.1 951858 D 652103 CDS YP_004107247.1 316932265 10063081 952391..952954 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: ara:Arad_9898 hypothetical protein; regulatory protein TetR 952954 10063081 Rpdx1_0884 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107247.1 952391 D 652103 CDS YP_004107248.1 316932266 10063082 953113..953550 1 NC_014834.1 KEGG: xau:Xaut_2861 hypothetical protein; hypothetical protein 953550 10063082 Rpdx1_0885 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107248.1 953113 D 652103 CDS YP_004107249.1 316932267 10063083 954133..954453 1 NC_014834.1 PFAM: protein of unknown function DUF736; KEGG: nwi:Nwi_2134 hypothetical protein; hypothetical protein 954453 10063083 Rpdx1_0886 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107249.1 954133 D 652103 CDS YP_004107250.1 316932268 10063084 complement(954517..954735) 1 NC_014834.1 KEGG: gdj:Gdia_2792 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 954735 10063084 Rpdx1_0887 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004107250.1 954517 R 652103 CDS YP_004107251.1 316932269 10063085 954906..955169 1 NC_014834.1 KEGG: cak:Caul_3813 hypothetical protein; hypothetical protein 955169 10063085 Rpdx1_0888 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107251.1 954906 D 652103 CDS YP_004107252.1 316932270 10063086 955312..955647 1 NC_014834.1 KEGG: cak:Caul_3814 hypothetical protein; hypothetical protein 955647 10063086 Rpdx1_0889 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107252.1 955312 D 652103 CDS YP_004107253.1 316932271 10063087 955595..956071 1 NC_014834.1 KEGG: pla:Plav_3529 hypothetical protein; hypothetical protein 956071 10063087 Rpdx1_0890 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107253.1 955595 D 652103 CDS YP_004107254.1 316932272 10063088 956199..956471 1 NC_014834.1 KEGG: cak:Caul_3816 putative transcriptional regulator; putative transcriptional regulator 956471 10063088 Rpdx1_0891 Rhodopseudomonas palustris DX-1 putative transcriptional regulator YP_004107254.1 956199 D 652103 CDS YP_004107255.1 316932273 10063089 956480..957655 1 NC_014834.1 KEGG: azc:AZC_3834 replication protein A; manually curated; PFAM: Replication initiator protein A; replication initiator protein A 957655 10063089 Rpdx1_0892 Rhodopseudomonas palustris DX-1 replication initiator protein A YP_004107255.1 956480 D 652103 CDS YP_004107256.1 316932274 10063090 957652..958290 1 NC_014834.1 KEGG: cak:Caul_3818 cobyrinic acid ac-diamide synthase; cobyrinic acid ac-diamide synthase 958290 10063090 Rpdx1_0893 Rhodopseudomonas palustris DX-1 cobyrinic acid ac-diamide synthase YP_004107256.1 957652 D 652103 CDS YP_004107257.1 316932275 10063091 958287..958538 1 NC_014834.1 KEGG: mpo:Mpop_3078 hypothetical protein; hypothetical protein 958538 10063091 Rpdx1_0894 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107257.1 958287 D 652103 CDS YP_004107258.1 316932276 10063092 958535..959056 1 NC_014834.1 KEGG: oca:OCAR_4200 hypothetical protein; hypothetical protein 959056 10063092 Rpdx1_0895 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107258.1 958535 D 652103 CDS YP_004107259.1 316932277 10063093 959053..959598 1 NC_014834.1 PFAM: Peptidase S26, conserved region; KEGG: xau:Xaut_4011 peptidase S26C conjugative transfer signal peptidase TraF; peptidase S26 959598 10063093 Rpdx1_0896 Rhodopseudomonas palustris DX-1 peptidase S26 YP_004107259.1 959053 D 652103 CDS YP_004107260.1 316932278 10063094 959647..959982 1 NC_014834.1 PFAM: protein of unknown function DUF736; KEGG: pde:Pden_1509 hypothetical protein; hypothetical protein 959982 10063094 Rpdx1_0897 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107260.1 959647 D 652103 CDS YP_004107261.1 316932279 10063095 959986..960753 1 NC_014834.1 PFAM: Lytic transglycosylase catalytic; KEGG: oca:OCAR_4197 lytic transglycosylase, catalytic; lytic transglycosylase 960753 10063095 Rpdx1_0898 Rhodopseudomonas palustris DX-1 lytic transglycosylase YP_004107261.1 959986 D 652103 CDS YP_004107262.1 316932280 10063096 960997..962736 1 NC_014834.1 KEGG: oca:OCAR_4196 type IV secretory pathway VirD2 components; type IV secretory pathway VirD2 component 962736 10063096 Rpdx1_0899 Rhodopseudomonas palustris DX-1 type IV secretory pathway VirD2 component YP_004107262.1 960997 D 652103 CDS YP_004107263.1 316932281 10063097 complement(962854..963855) 1 NC_014834.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mlo:mll7611 serine/threonine dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta 963855 10063097 Rpdx1_0900 Rhodopseudomonas palustris DX-1 pyridoxal-5'-phosphate-dependent protein subunit beta YP_004107263.1 962854 R 652103 CDS YP_004107264.1 316932282 10063098 complement(963852..964271) 1 NC_014834.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: hmo:HM1_0326 conserved hypothetical protein, putative cupin domain protein; cupin 964271 10063098 Rpdx1_0901 Rhodopseudomonas palustris DX-1 cupin YP_004107264.1 963852 R 652103 CDS YP_004107265.1 316932283 10063099 complement(964290..964589) 1 NC_014834.1 SMART: regulatory protein ArsR; KEGG: mlo:mll3509 hypothetical protein; regulatory protein ArsR 964589 10063099 Rpdx1_0902 Rhodopseudomonas palustris DX-1 regulatory protein ArsR YP_004107265.1 964290 R 652103 CDS YP_004107266.1 316932284 10063100 964936..965250 1 NC_014834.1 KEGG: nfa:nfa16520 hypothetical protein; hypothetical protein 965250 10063100 Rpdx1_0903 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107266.1 964936 D 652103 CDS YP_004107267.1 316932285 10063101 965247..965600 1 NC_014834.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bmj:BMULJ_04885 glyoxalase/bleomycin resistance protein; glyoxalase/bleomycin resistance protein/dioxygenase 965600 10063101 Rpdx1_0904 Rhodopseudomonas palustris DX-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_004107267.1 965247 D 652103 CDS YP_004107268.1 316932286 10063102 complement(965694..966920) 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: cyn:Cyan7425_0013 major facilitator superfamily MFS_1; major facilitator superfamily protein 966920 10063102 Rpdx1_0905 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004107268.1 965694 R 652103 CDS YP_004107269.1 316932287 10063103 967016..967912 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pag:PLES_30461 transcriptional regulator PtxR; LysR family transcriptional regulator 967912 10063103 Rpdx1_0906 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107269.1 967016 D 652103 CDS YP_004107270.1 316932288 10063104 968141..970126 1 NC_014834.1 PFAM: TRAG family protein; KEGG: xau:Xaut_2876 conjugal transfer coupling protein TraG; TRAG family protein 970126 10063104 Rpdx1_0907 Rhodopseudomonas palustris DX-1 TRAG family protein YP_004107270.1 968141 D 652103 CDS YP_004107271.1 316932289 10063105 970130..970558 1 NC_014834.1 KEGG: oca:OCAR_4194 helix-turn-helix protein of CopG family; helix-turn-helix domain-containing protein 970558 10063105 Rpdx1_0908 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004107271.1 970130 D 652103 CDS YP_004107272.1 316932290 10063106 970976..972148 1 NC_014834.1 PFAM: aminotransferase class V; KEGG: scl:sce8911 class-V aminotransferase; class V aminotransferase 972148 10063106 Rpdx1_0909 Rhodopseudomonas palustris DX-1 class V aminotransferase YP_004107272.1 970976 D 652103 CDS YP_004107273.1 316932291 10063107 972448..973569 1 NC_014834.1 PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: gym:GYMC10_3404 epoxide hydrolase domain protein; epoxide hydrolase domain-containing protein 973569 10063107 Rpdx1_0910 Rhodopseudomonas palustris DX-1 epoxide hydrolase domain-containing protein YP_004107273.1 972448 D 652103 CDS YP_004107274.1 316932292 10063108 973731..973988 1 NC_014834.1 hypothetical protein 973988 10063108 Rpdx1_0911 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107274.1 973731 D 652103 CDS YP_004107275.1 316932293 10063109 complement(974166..975020) 1 NC_014834.1 PFAM: TrkA-N domain protein; KEGG: vap:Vapar_5657 NmrA family protein; TrkA-N domain-containing protein 975020 10063109 Rpdx1_0912 Rhodopseudomonas palustris DX-1 TrkA-N domain-containing protein YP_004107275.1 974166 R 652103 CDS YP_004107276.1 316932294 10063110 complement(975100..975783) 1 NC_014834.1 KEGG: cvi:CV_2335 DeoR family transcriptional regulator; DeoR family transcriptional regulator 975783 10063110 Rpdx1_0913 Rhodopseudomonas palustris DX-1 DeoR family transcriptional regulator YP_004107276.1 975100 R 652103 CDS YP_004107277.1 316932295 10063111 976016..977041 1 NC_014834.1 KEGG: xau:Xaut_3004 P-type conjugative transfer ATPase TrbB; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; P-type conjugative transfer ATPase TrbB 977041 10063111 Rpdx1_0914 Rhodopseudomonas palustris DX-1 P-type conjugative transfer ATPase TrbB YP_004107277.1 976016 D 652103 CDS YP_004107278.1 316932296 10063112 977022..977354 1 NC_014834.1 PFAM: Conjugal transfer protein TrbC; KEGG: mes:Meso_0508 conjugal transfer protein TrbC; conjugal transfer protein TrbC 977354 10063112 Rpdx1_0915 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbC YP_004107278.1 977022 D 652103 CDS YP_004107279.1 316932297 10063113 977354..977635 1 NC_014834.1 KEGG: sjp:SJA_C1-19970 type IV secretory pathway TrbD component; type IV secretory pathway TrbD component 977635 10063113 Rpdx1_0916 Rhodopseudomonas palustris DX-1 type IV secretory pathway TrbD component YP_004107279.1 977354 D 652103 CDS YP_004107280.1 316932298 10063114 977652..980117 1 NC_014834.1 SMART: AAA ATPase; KEGG: sjp:SJA_C1-19960 type IV secretory pathway VirB4 component; AAA ATPase 980117 10063114 Rpdx1_0917 Rhodopseudomonas palustris DX-1 AAA ATPase YP_004107280.1 977652 D 652103 CDS YP_004107281.1 316932299 10063115 980104..980877 1 NC_014834.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: mes:Meso_0505 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ 980877 10063115 Rpdx1_0918 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbJ YP_004107281.1 980104 D 652103 CDS YP_004107282.1 316932300 10063116 980907..981188 1 NC_014834.1 KEGG: pde:Pden_1479 hypothetical protein; hypothetical protein 981188 10063116 Rpdx1_0919 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107282.1 980907 D 652103 CDS YP_004107283.1 316932301 10063117 981195..982547 1 NC_014834.1 KEGG: xau:Xaut_2884 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL 982547 10063117 Rpdx1_0920 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbL YP_004107283.1 981195 D 652103 CDS YP_004107284.1 316932302 10063118 982544..983233 1 NC_014834.1 KEGG: oan:Oant_3219 conjugal transfer protein TrbF; conjugal transfer protein TrbF 983233 10063118 Rpdx1_0921 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbF YP_004107284.1 982544 D 652103 CDS YP_004107285.1 316932303 10063119 983230..984213 1 NC_014834.1 KEGG: oca:OCAR_4184 conjugal transfer protein TrbG/VirB9/CagX; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 984213 10063119 Rpdx1_0922 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbG YP_004107285.1 983230 D 652103 CDS YP_004107286.1 316932304 10063120 984210..985385 1 NC_014834.1 PFAM: conjugation TrbI family protein; KEGG: mes:Meso_0500 conjugation TrbI-like protein; conjugation TrbI family protein 985385 10063120 Rpdx1_0923 Rhodopseudomonas palustris DX-1 conjugation TrbI family protein YP_004107286.1 984210 D 652103 CDS YP_004107287.1 316932305 10063121 985424..985612 1 NC_014834.1 KEGG: bja:bsl8278 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2274; hypothetical protein 985612 10063121 Rpdx1_0924 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107287.1 985424 D 652103 CDS YP_004107288.1 316932306 10063122 complement(985584..986543) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mes:Meso_3862 LysR family transcriptional regulator; LysR family transcriptional regulator 986543 10063122 Rpdx1_0925 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107288.1 985584 R 652103 CDS YP_004107289.1 316932307 10063123 986599..987084 1 NC_014834.1 PFAM: regulatory protein MarR; KEGG: pde:Pden_4527 MarR family transcriptional regulator; regulatory protein MarR 987084 10063123 Rpdx1_0926 Rhodopseudomonas palustris DX-1 regulatory protein MarR YP_004107289.1 986599 D 652103 CDS YP_004107290.1 316932308 10063124 987077..987829 1 NC_014834.1 PFAM: Methyltransferase type 11; KEGG: pde:Pden_4526 methyltransferase type 11; type 11 methyltransferase 987829 10063124 Rpdx1_0927 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004107290.1 987077 D 652103 CDS YP_004107291.1 316932309 10063125 987826..988287 1 NC_014834.1 manually curated; KEGG: sna:Snas_3802 hypothetical protein; hypothetical protein 988287 10063125 Rpdx1_0928 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107291.1 987826 D 652103 CDS YP_004107292.1 316932310 10063126 988345..989229 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: rde:RD1_2829 haloacetate dehalogenase H-1, putative; alpha/beta hydrolase fold protein 989229 10063126 Rpdx1_0929 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004107292.1 988345 D 652103 CDS YP_004107293.1 316932311 10063127 989471..989851 1 NC_014834.1 PFAM: Camphor resistance CrcB protein; KEGG: gbe:GbCGDNIH1_1541 CrcB family protein; camphor resistance CrcB protein 989851 10063127 Rpdx1_0930 Rhodopseudomonas palustris DX-1 camphor resistance CrcB protein YP_004107293.1 989471 D 652103 CDS YP_004107294.1 316932312 10063130 990925..992199 1 NC_014834.1 PFAM: beta-lactamase; KEGG: smt:Smal_2573 beta-lactamase; beta-lactamase 992199 10063130 Rpdx1_0933 Rhodopseudomonas palustris DX-1 beta-lactamase YP_004107294.1 990925 D 652103 CDS YP_004107295.1 316932313 10063132 complement(993177..993602) 1 NC_014834.1 PFAM: protein of unknown function DUF307; KEGG: bja:blr2954 hypothetical protein; hypothetical protein 993602 10063132 Rpdx1_0934 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107295.1 993177 R 652103 CDS YP_004107296.1 316932314 10063133 993811..994134 1 NC_014834.1 KEGG: bja:bsr4225 hypothetical protein; hypothetical protein 994134 10063133 Rpdx1_0935 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107296.1 993811 D 652103 CDS YP_004107297.1 316932315 10063134 complement(994167..995759) 1 NC_014834.1 KEGG: bja:bll2229 ACY1 bifunctional acylase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 995759 10063134 Rpdx1_0936 Rhodopseudomonas palustris DX-1 gamma-glutamyltransferase YP_004107297.1 994167 R 652103 CDS YP_004107298.1 316932316 10063135 complement(995875..998586) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bja:blr4813 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 998586 10063135 Rpdx1_0937 Rhodopseudomonas palustris DX-1 diguanylate cyclase/phosphodiesterase YP_004107298.1 995875 R 652103 CDS YP_004107299.1 316932317 10063136 complement(998802..999203) 1 NC_014834.1 KEGG: saj:SaurJH9_0901 phage-related protein-like protein; hypothetical protein 999203 10063136 Rpdx1_0938 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107299.1 998802 R 652103 CDS YP_004107300.1 316932318 10063137 999637..999831 1 NC_014834.1 KEGG: bra:BRADO7011 hypothetical protein; hypothetical protein 999831 10063137 Rpdx1_0939 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107300.1 999637 D 652103 CDS YP_004107301.1 316932319 10063138 complement(999832..1001097) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: xau:Xaut_4077 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein 1001097 10063138 Rpdx1_0940 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004107301.1 999832 R 652103 CDS YP_004107302.1 316932320 10063139 complement(1001180..1001521) 1 NC_014834.1 KEGG: bra:BRADO0362 putative cytochrome c precursor (cytochrome c552)(CycB); putative cytochrome c 1001521 10063139 Rpdx1_0941 Rhodopseudomonas palustris DX-1 putative cytochrome c YP_004107302.1 1001180 R 652103 CDS YP_004107303.1 316932321 10063140 complement(1001530..1001964) 1 NC_014834.1 KEGG: bja:blr0497 hypothetical protein; hypothetical protein 1001964 10063140 Rpdx1_0942 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107303.1 1001530 R 652103 CDS YP_004107304.1 316932322 10063141 complement(1002158..1003975) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: nha:Nham_3276 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase 1003975 10063141 Rpdx1_0943 Rhodopseudomonas palustris DX-1 PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase YP_004107304.1 1002158 R 652103 CDS YP_004107305.1 316932323 10063142 1004153..1004995 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr0893 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 1004995 10063142 Rpdx1_0944 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004107305.1 1004153 D 652103 CDS YP_004107306.1 316932324 10063143 complement(1005121..1006500) 1 NC_014834.1 PFAM: cytochrome P450; KEGG: bbt:BBta_7679 putative cytochrome P450 family protein; cytochrome P450 1006500 10063143 Rpdx1_0945 Rhodopseudomonas palustris DX-1 cytochrome P450 YP_004107306.1 1005121 R 652103 CDS YP_004107307.1 316932325 10063144 complement(1006624..1008018) 1 NC_014834.1 KEGG: bja:blr4264 putative adenylate cyclase protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase 1008018 10063144 Rpdx1_0946 Rhodopseudomonas palustris DX-1 adenylate/guanylate cyclase YP_004107307.1 1006624 R 652103 CDS YP_004107308.1 316932326 10063145 1008075..1009043 1 NC_014834.1 PFAM: peptidase M48 Ste24p; KEGG: bja:blr2450 heat shock protein HtpX; peptidase M48 Ste24p 1009043 10063145 Rpdx1_0947 Rhodopseudomonas palustris DX-1 peptidase M48 Ste24p YP_004107308.1 1008075 D 652103 CDS YP_004107309.1 316932327 10063146 1009310..1010725 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr0898 ATP-binding protein; major facilitator superfamily protein 1010725 10063146 Rpdx1_0948 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004107309.1 1009310 D 652103 CDS YP_004107310.1 316932328 10063147 complement(1010722..1011909) 1 NC_014834.1 PFAM: aminotransferase class V; KEGG: bbt:BBta_0544 putative aminotransferase, class V; class V aminotransferase 1011909 10063147 Rpdx1_0949 Rhodopseudomonas palustris DX-1 class V aminotransferase YP_004107310.1 1010722 R 652103 CDS YP_004107311.1 316932329 10063148 complement(1011966..1012820) 1 NC_014834.1 KEGG: mlo:mlr2577 hypothetical protein; hypothetical protein 1012820 10063148 Rpdx1_0950 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107311.1 1011966 R 652103 CDS YP_004107312.1 316932330 10063149 complement(1012850..1013581) 1 NC_014834.1 KEGG: bbt:BBta_0545 putative nuclease-like protein; PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); nuclease 1013581 10063149 Rpdx1_0951 Rhodopseudomonas palustris DX-1 nuclease YP_004107312.1 1012850 R 652103 CDS YP_004107313.1 316932331 10063150 complement(1013696..1015435) 1 NC_014834.1 KEGG: nha:Nham_3607 hypothetical protein; hypothetical protein 1015435 10063150 Rpdx1_0952 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107313.1 1013696 R 652103 CDS YP_004107314.1 316932332 10063151 1015879..1016745 1 NC_014834.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bra:BRADO6982 putative peptidase; caspase-like; peptidase C14 caspase catalytic subunit p20 1016745 10063151 Rpdx1_0953 Rhodopseudomonas palustris DX-1 peptidase C14 caspase catalytic subunit p20 YP_004107314.1 1015879 D 652103 CDS YP_004107315.1 316932333 10063152 complement(1016836..1017594) 1 NC_014834.1 KEGG: bja:bll1137 carbonic anhydrase; PFAM: carbonic anhydrase; carbonate dehydratase 1017594 10063152 Rpdx1_0954 Rhodopseudomonas palustris DX-1 carbonate dehydratase YP_004107315.1 1016836 R 652103 CDS YP_004107316.1 316932334 10063153 complement(1017685..1018317) 1 NC_014834.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: nha:Nham_0557 putative phage repressor; putative phage repressor 1018317 10063153 Rpdx1_0955 Rhodopseudomonas palustris DX-1 putative phage repressor YP_004107316.1 1017685 R 652103 CDS YP_004107317.1 316932335 10063154 1018644..1018988 1 NC_014834.1 PFAM: protein of unknown function DUF952; KEGG: nha:Nham_0556 hypothetical protein; hypothetical protein 1018988 10063154 Rpdx1_0956 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107317.1 1018644 D 652103 CDS YP_004107318.1 316932336 10063155 1018985..1020079 1 NC_014834.1 TIGRFAM: dihydroorotate dehydrogenase; KEGG: bja:blr1140 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase; dihydroorotate dehydrogenase 1020079 10063155 Rpdx1_0957 Rhodopseudomonas palustris DX-1 dihydroorotate dehydrogenase YP_004107318.1 1018985 D 652103 CDS YP_004107319.1 316932337 10063156 complement(1020412..1021146) 1 NC_014834.1 KEGG: bja:bll1142 hypothetical protein; hypothetical protein 1021146 10063156 Rpdx1_0958 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107319.1 1020412 R 652103 CDS YP_004107320.1 316932338 10063157 complement(1021293..1022000) 1 NC_014834.1 PFAM: carbonic anhydrase; KEGG: msl:Msil_2753 carbonic anhydrase; carbonic anhydrase 1022000 10063157 Rpdx1_0959 Rhodopseudomonas palustris DX-1 carbonic anhydrase YP_004107320.1 1021293 R 652103 CDS YP_004107321.1 316932339 10063158 complement(1022137..1023435) 1 NC_014834.1 KEGG: bja:bll1141 DNA-damage-inducible protein F; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1023435 10063158 Rpdx1_0960 Rhodopseudomonas palustris DX-1 MATE efflux family protein YP_004107321.1 1022137 R 652103 CDS YP_004107322.1 316932340 10063159 complement(1023476..1023778) 1 NC_014834.1 KEGG: nwi:Nwi_0463 hypothetical protein; hypothetical protein 1023778 10063159 Rpdx1_0961 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107322.1 1023476 R 652103 CDS YP_004107323.1 316932341 10063160 complement(1023852..1025693) 1 NC_014834.1 PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: bja:bll1144 ATP-dependent DNA ligase; ATP dependent DNA ligase 1025693 10063160 Rpdx1_0962 Rhodopseudomonas palustris DX-1 ATP dependent DNA ligase YP_004107323.1 1023852 R 652103 CDS YP_004107324.1 316932342 10063161 complement(1025690..1026736) 1 NC_014834.1 KEGG: bbt:BBta_0799 putative metallo-hydrolase/oxidoreductase; putative metallo-hydrolase/oxidoreductase 1026736 10063161 Rpdx1_0963 Rhodopseudomonas palustris DX-1 putative metallo-hydrolase/oxidoreductase YP_004107324.1 1025690 R 652103 CDS YP_004107325.1 316932343 10063162 complement(1026851..1028197) 1 NC_014834.1 PFAM: porin; KEGG: nha:Nham_0239 putative outer membrane protein; porin 1028197 10063162 Rpdx1_0964 Rhodopseudomonas palustris DX-1 porin YP_004107325.1 1026851 R 652103 CDS YP_004107326.1 316932344 10063163 1028536..1029756 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_0801 putative amino-acid ABC transport system, periplasmic binding protein; extracellular ligand-binding receptor 1029756 10063163 Rpdx1_0965 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004107326.1 1028536 D 652103 CDS YP_004107327.1 316932345 10063164 1029851..1032619 1 NC_014834.1 manually curated; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: bbt:BBta_0802 putative ATP dependent DNA helicase; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 1032619 10063164 Rpdx1_0966 Rhodopseudomonas palustris DX-1 DEAD/DEAH box helicase YP_004107327.1 1029851 D 652103 CDS YP_004107328.1 316932346 10063165 1032718..1033440 1 NC_014834.1 KEGG: nha:Nham_0241 metallophosphoesterase; metallophosphoesterase 1033440 10063165 Rpdx1_0967 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004107328.1 1032718 D 652103 CDS YP_004107329.1 316932347 10063166 complement(1033604..1034467) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:bll1150 transcriptional regulatory protein; LysR family transcriptional regulator 1034467 10063166 Rpdx1_0968 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107329.1 1033604 R 652103 CDS YP_004107330.1 316932348 10063167 1034569..1035489 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: nha:Nham_0243 hypothetical protein; hypothetical protein 1035489 10063167 Rpdx1_0969 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107330.1 1034569 D 652103 CDS YP_004107331.1 316932349 10063168 1035569..1036915 1 NC_014834.1 KEGG: bja:bll8038 putative manganese transport protein; putative manganese transport protein 1036915 10063168 Rpdx1_0970 Rhodopseudomonas palustris DX-1 putative manganese transport protein YP_004107331.1 1035569 D 652103 CDS YP_004107332.1 316932350 10063169 complement(1037081..1037878) 1 NC_014834.1 PFAM: hypothetical protein; KEGG: bra:BRADO6731 hypothetical protein; hypothetical protein 1037878 10063169 Rpdx1_0971 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107332.1 1037081 R 652103 CDS YP_004107333.1 316932351 10063170 complement(1037878..1038840) 1 NC_014834.1 PFAM: protein of unknown function DUF81; KEGG: bja:bll1154 hypothetical protein; hypothetical protein 1038840 10063170 Rpdx1_0972 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107333.1 1037878 R 652103 CDS YP_004107334.1 316932352 10063171 complement(1039037..1042420) 1 NC_014834.1 KEGG: bja:bll1155 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 1042420 10063171 Rpdx1_0973 Rhodopseudomonas palustris DX-1 Sel1 domain-containing protein repeat-containing protein YP_004107334.1 1039037 R 652103 CDS YP_004107335.1 316932353 10063172 complement(1042674..1043231) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bja:blr0601 transcriptional regulatory protein; regulatory protein TetR 1043231 10063172 Rpdx1_0974 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107335.1 1042674 R 652103 CDS YP_004107336.1 316932354 10063173 1043564..1043950 1 NC_014834.1 KEGG: bbt:BBta_0814 hypothetical protein; hypothetical protein 1043950 10063173 Rpdx1_0975 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107336.1 1043564 D 652103 CDS YP_004107337.1 316932355 10063174 1044044..1045834 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1158 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1045834 10063174 Rpdx1_0976 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004107337.1 1044044 D 652103 CDS YP_004107338.1 316932356 10063175 1045988..1047196 1 NC_014834.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bra:BRADO6724 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 1047196 10063175 Rpdx1_0977 Rhodopseudomonas palustris DX-1 acetyl-CoA acetyltransferase YP_004107338.1 1045988 D 652103 CDS YP_004107339.1 316932357 10063177 1047396..1049612 1 NC_014834.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_0817 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein 1049612 10063177 Rpdx1_0979 Rhodopseudomonas palustris DX-1 NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein YP_004107339.1 1047396 D 652103 CDS YP_004107340.1 316932358 10063178 complement(1049923..1050537) 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_0818 glutathione S-transferase; glutathione S-transferase domain-containing protein 1050537 10063178 Rpdx1_0980 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004107340.1 1049923 R 652103 CDS YP_004107341.1 316932359 10063179 complement(1050617..1051528) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dsh:Dshi_2523 putative hydrogen peroxide-inducible genes activator; LysR family transcriptional regulator 1051528 10063179 Rpdx1_0981 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107341.1 1050617 R 652103 CDS YP_004107342.1 316932360 10063180 1051632..1052273 1 NC_014834.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: alv:Alvin_1006 peroxiredoxin; alkyl hydroperoxide reductase 1052273 10063180 Rpdx1_0982 Rhodopseudomonas palustris DX-1 alkyl hydroperoxide reductase YP_004107342.1 1051632 D 652103 CDS YP_004107343.1 316932361 10063181 1052349..1052792 1 NC_014834.1 PFAM: Ferritin Dps family protein; KEGG: pzu:PHZ_p0100 DNA-binding ferritin-like protein (oxidative damage protectant); ferritin Dps family protein 1052792 10063181 Rpdx1_0983 Rhodopseudomonas palustris DX-1 ferritin Dps family protein YP_004107343.1 1052349 D 652103 CDS YP_004107344.1 316932362 10063182 1052858..1053730 1 NC_014834.1 KEGG: mch:Mchl_4146 beta-lactamase domain protein; beta-lactamase domain-containing protein 1053730 10063182 Rpdx1_0984 Rhodopseudomonas palustris DX-1 beta-lactamase domain-containing protein YP_004107344.1 1052858 D 652103 CDS YP_004107345.1 316932363 10063183 1053898..1054467 1 NC_014834.1 KEGG: bra:BRADO6719 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 1054467 10063183 Rpdx1_0985 Rhodopseudomonas palustris DX-1 regulatory protein MarR YP_004107345.1 1053898 D 652103 CDS YP_004107346.1 316932364 10063184 1054561..1055931 1 NC_014834.1 TIGRFAM: glutamate/cysteine ligase; KEGG: bja:blr1164 putative glutathione synthetase; PFAM: glutamate--cysteine ligase GCS2; glutamate/cysteine ligase 1055931 10063184 Rpdx1_0986 Rhodopseudomonas palustris DX-1 glutamate/cysteine ligase YP_004107346.1 1054561 D 652103 CDS YP_004107347.1 316932365 10063185 1056111..1056629 1 NC_014834.1 SMART: Apple; KEGG: bja:blr1165 hypothetical protein; hypothetical protein 1056629 10063185 Rpdx1_0987 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107347.1 1056111 D 652103 CDS YP_004107348.1 316932366 10063186 complement(1056648..1057418) 1 NC_014834.1 TIGRFAM: signal peptidase I; KEGG: nha:Nham_0252 peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 1057418 10063186 Rpdx1_0988 Rhodopseudomonas palustris DX-1 signal peptidase I YP_004107348.1 1056648 R 652103 CDS YP_004107349.1 316932367 10063187 complement(1057415..1058842) 1 NC_014834.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: bbt:BBta_0825 putative peptidase TldD; peptidase U62 modulator of DNA gyrase 1058842 10063187 Rpdx1_0989 Rhodopseudomonas palustris DX-1 peptidase U62 modulator of DNA gyrase YP_004107349.1 1057415 R 652103 CDS YP_004107350.1 316932368 10063188 1058966..1059181 1 NC_014834.1 PFAM: protein of unknown function DUF433; KEGG: ana:asr2958 hypothetical protein; hypothetical protein 1059181 10063188 Rpdx1_0990 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107350.1 1058966 D 652103 CDS YP_004107351.1 316932369 10063189 complement(1059185..1059298) 1 NC_014834.1 hypothetical protein 1059298 10063189 Rpdx1_0991 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107351.1 1059185 R 652103 CDS YP_004107352.1 316932370 10063190 1059482..1059952 1 NC_014834.1 KEGG: rso:RS02614 putative transcription regulator protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 1059952 10063190 Rpdx1_0992 Rhodopseudomonas palustris DX-1 MarR family transcriptional regulator YP_004107352.1 1059482 D 652103 CDS YP_004107353.1 316932371 10063191 1060075..1060500 1 NC_014834.1 KEGG: pmy:Pmen_2630 OsmC family protein; TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein; peroxiredoxin 1060500 10063191 Rpdx1_0993 Rhodopseudomonas palustris DX-1 peroxiredoxin YP_004107353.1 1060075 D 652103 CDS YP_004107354.1 316932372 10063193 complement(1060722..1061270) 1 NC_014834.1 PFAM: Invasion associated locus B family protein; KEGG: nwi:Nwi_0222 invasion associated locus B; invasion associated locus B family protein 1061270 10063193 Rpdx1_0995 Rhodopseudomonas palustris DX-1 invasion associated locus B family protein YP_004107354.1 1060722 R 652103 CDS YP_004107355.1 316932373 10063194 1061692..1062549 1 NC_014834.1 KEGG: bja:blr1170 cytochrome c oxidase subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c oxidase subunit II 1062549 10063194 Rpdx1_0996 Rhodopseudomonas palustris DX-1 cytochrome c oxidase subunit II YP_004107355.1 1061692 D 652103 CDS YP_004107356.1 316932374 10063195 1062618..1064243 1 NC_014834.1 KEGG: bra:BRADO6706 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I 1064243 10063195 Rpdx1_0997 Rhodopseudomonas palustris DX-1 cytochrome c oxidase subunit I YP_004107356.1 1062618 D 652103 CDS YP_004107357.1 316932375 10063196 1064316..1065254 1 NC_014834.1 KEGG: bja:blr1172 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 1065254 10063196 Rpdx1_0998 Rhodopseudomonas palustris DX-1 protoheme IX farnesyltransferase YP_004107357.1 1064316 D 652103 CDS YP_004107358.1 316932376 10063197 1065266..1065433 1 NC_014834.1 KEGG: oca:OCAR_4688 hypothetical protein; hypothetical protein 1065433 10063197 Rpdx1_0999 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107358.1 1065266 D 652103 CDS YP_004107359.1 316932377 10063198 1065448..1066074 1 NC_014834.1 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: nha:Nham_3459 cytochrome c oxidase assembly protein; cytochrome c oxidase assembly protein CtaG/Cox11 1066074 10063198 Rpdx1_1000 Rhodopseudomonas palustris DX-1 cytochrome c oxidase assembly protein CtaG/Cox11 YP_004107359.1 1065448 D 652103 CDS YP_004107360.1 316932378 10063199 1066146..1067000 1 NC_014834.1 PFAM: cytochrome c oxidase subunit III; KEGG: bbt:BBta_0833 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 1067000 10063199 Rpdx1_1001 Rhodopseudomonas palustris DX-1 cytochrome c oxidase subunit III YP_004107360.1 1066146 D 652103 CDS YP_004107361.1 316932379 10063200 1067164..1067559 1 NC_014834.1 PFAM: protein of unknown function DUF983; KEGG: bja:blr1176 hypothetical protein; hypothetical protein 1067559 10063200 Rpdx1_1002 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107361.1 1067164 D 652103 CDS YP_004107362.1 316932380 10063201 1067556..1068338 1 NC_014834.1 PFAM: Surfeit locus 1 family protein; KEGG: oca:OCAR_4692 surfeit locus 1 family protein; surfeit locus 1 family protein 1068338 10063201 Rpdx1_1003 Rhodopseudomonas palustris DX-1 surfeit locus 1 family protein YP_004107362.1 1067556 D 652103 CDS YP_004107363.1 316932381 10063202 1068430..1068660 1 NC_014834.1 PFAM: protein of unknown function UPF0150; KEGG: rrs:RoseRS_1435 hypothetical protein; hypothetical protein 1068660 10063202 Rpdx1_1004 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107363.1 1068430 D 652103 CDS YP_004107364.1 316932382 10063203 1068662..1068898 1 NC_014834.1 PFAM: YcfA family protein; KEGG: mta:Moth_0298 YcfA-like; hypothetical protein 1068898 10063203 Rpdx1_1005 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107364.1 1068662 D 652103 CDS YP_004107365.1 316932383 10063204 1069105..1070523 1 NC_014834.1 TIGRFAM: threonine synthase; KEGG: nha:Nham_0262 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase 1070523 10063204 Rpdx1_1006 Rhodopseudomonas palustris DX-1 threonine synthase YP_004107365.1 1069105 D 652103 CDS YP_004107366.1 316932384 10063205 1070520..1071809 1 NC_014834.1 KEGG: bja:blr1182 mitochondrial processing peptidase-like protein; PFAM: peptidase M16 domain protein; processing peptidase 1071809 10063205 Rpdx1_1007 Rhodopseudomonas palustris DX-1 processing peptidase YP_004107366.1 1070520 D 652103 CDS YP_004107367.1 316932385 10063206 1071870..1072457 1 NC_014834.1 KEGG: bja:blr1183 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Ribosomal-protein-alanine N-acetyltransferase 1072457 10063206 Rpdx1_1008 Rhodopseudomonas palustris DX-1 Ribosomal-protein-alanine N-acetyltransferase YP_004107367.1 1071870 D 652103 CDS YP_004107368.1 316932386 10063207 1072553..1073206 1 NC_014834.1 KEGG: bja:blr1184 hypothetical protein; hypothetical protein 1073206 10063207 Rpdx1_1009 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107368.1 1072553 D 652103 CDS YP_004107369.1 316932387 10063208 complement(1073722..1074213) 1 NC_014834.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: nha:Nham_0266 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' 1074213 10063208 Rpdx1_1010 Rhodopseudomonas palustris DX-1 H+transporting two-sector ATPase subunit B/B' YP_004107369.1 1073722 R 652103 CDS YP_004107370.1 316932388 10063209 complement(1074218..1074775) 1 NC_014834.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: nwi:Nwi_0236 H+-transporting two-sector ATPase, B/B' subunit; H+transporting two-sector ATPase subunit B/B' 1074775 10063209 Rpdx1_1011 Rhodopseudomonas palustris DX-1 H+transporting two-sector ATPase subunit B/B' YP_004107370.1 1074218 R 652103 CDS YP_004107371.1 316932389 10063210 complement(1074833..1075060) 1 NC_014834.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: nwi:Nwi_0237 F0F1 ATP synthase subunit C; H+transporting two-sector ATPase subunit C 1075060 10063210 Rpdx1_1012 Rhodopseudomonas palustris DX-1 H+transporting two-sector ATPase subunit C YP_004107371.1 1074833 R 652103 CDS YP_004107372.1 316932390 10063211 complement(1075109..1075855) 1 NC_014834.1 KEGG: nwi:Nwi_0238 F0F1 ATP synthase subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; ATP synthase F0 subunit A 1075855 10063211 Rpdx1_1013 Rhodopseudomonas palustris DX-1 ATP synthase F0 subunit A YP_004107372.1 1075109 R 652103 CDS YP_004107373.1 316932391 10063212 complement(1075925..1076311) 1 NC_014834.1 manually curated; KEGG: nha:Nham_0270 FoF1 ATP synthase, subunit I; FoF1 ATP synthase subunit I 1076311 10063212 Rpdx1_1014 Rhodopseudomonas palustris DX-1 FoF1 ATP synthase subunit I YP_004107373.1 1075925 R 652103 CDS YP_004107374.1 316932392 10063213 1076614..1077237 1 NC_014834.1 PFAM: DSBA oxidoreductase; KEGG: bbt:BBta_0848 hypothetical protein; DSBA oxidoreductase 1077237 10063213 Rpdx1_1015 Rhodopseudomonas palustris DX-1 DSBA oxidoreductase YP_004107374.1 1076614 D 652103 CDS YP_004107375.1 316932393 10063214 1077301..1077891 1 NC_014834.1 KEGG: bja:blr1191 hypothetical protein; hypothetical protein 1077891 10063214 Rpdx1_1016 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107375.1 1077301 D 652103 CDS YP_004107376.1 316932394 10063215 1077915..1078388 1 NC_014834.1 PFAM: protein of unknown function UPF0047; KEGG: bja:blr1192 hypothetical protein; hypothetical protein 1078388 10063215 Rpdx1_1017 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107376.1 1077915 D 652103 CDS YP_004107377.1 316932395 10063216 complement(1078530..1080194) 1 NC_014834.1 KEGG: bbt:BBta_0851 MFS family sugar transporter; MFS family sugar transporter 1080194 10063216 Rpdx1_1018 Rhodopseudomonas palustris DX-1 MFS family sugar transporter YP_004107377.1 1078530 R 652103 CDS YP_004107378.1 316932396 10063217 1080530..1081207 1 NC_014834.1 KEGG: bra:BRADO6680 two-component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; LuxR family two component transcriptional regulator 1081207 10063217 Rpdx1_1019 Rhodopseudomonas palustris DX-1 LuxR family two component transcriptional regulator YP_004107378.1 1080530 D 652103 CDS YP_004107379.1 316932397 10063218 complement(1081490..1084999) 1 NC_014834.1 KEGG: bbt:BBta_0860 putative two-component hybrid sensor histidine kinase and response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Na+/solute symporter; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; ATP-binding protein 1084999 10063218 Rpdx1_1020 Rhodopseudomonas palustris DX-1 ATP-binding protein YP_004107379.1 1081490 R 652103 CDS YP_004107380.1 316932398 10063219 complement(1085176..1086405) 1 NC_014834.1 TIGRFAM: 5-aminolevulinic acid synthase; KEGG: bra:BRADO6672 5-aminolevulinate synthase; PFAM: aminotransferase class I and II; 5-aminolevulinate synthase 1086405 10063219 Rpdx1_1021 Rhodopseudomonas palustris DX-1 5-aminolevulinate synthase YP_004107380.1 1085176 R 652103 CDS YP_004107381.1 316932399 10063220 complement(1086630..1087691) 1 NC_014834.1 KEGG: bja:bll1202 hypothetical protein; hypothetical protein 1087691 10063220 Rpdx1_1022 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107381.1 1086630 R 652103 CDS YP_004107382.1 316932400 10063221 complement(1087832..1089970) 1 NC_014834.1 KEGG: bja:bll1203 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1089970 10063221 Rpdx1_1023 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004107382.1 1087832 R 652103 CDS YP_004107383.1 316932401 10063222 complement(1090194..1090901) 1 NC_014834.1 KEGG: bra:BRADO6669 putative outer-membrane immunogenic protein precursor; putative secreted protein; putative outer-membrane immunogenic protein 1090901 10063222 Rpdx1_1024 Rhodopseudomonas palustris DX-1 putative outer-membrane immunogenic protein YP_004107383.1 1090194 R 652103 CDS YP_004107384.1 316932402 10063223 1091467..1092216 1 NC_014834.1 KEGG: nha:Nham_3428 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1092216 10063223 Rpdx1_1025 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107384.1 1091467 D 652103 CDS YP_004107385.1 316932403 10063224 1092225..1093094 1 NC_014834.1 PFAM: ABC-3 protein; KEGG: nwi:Nwi_0915 ABC-type Mn2+/Zn2+ transport systems permease components; ABC-3 protein 1093094 10063224 Rpdx1_1026 Rhodopseudomonas palustris DX-1 ABC-3 protein YP_004107385.1 1092225 D 652103 CDS YP_004107386.1 316932404 10063225 1093100..1094005 1 NC_014834.1 PFAM: periplasmic solute binding protein; KEGG: oca:OCAR_4907 periplasmic chelated iron-binding protein YfeA; periplasmic solute-binding protein 1094005 10063225 Rpdx1_1027 Rhodopseudomonas palustris DX-1 periplasmic solute-binding protein YP_004107386.1 1093100 D 652103 CDS YP_004107387.1 316932405 10063226 1094128..1095177 1 NC_014834.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: bbt:BBta_1342 putative cobalamin synthesis protein/P47K family protein; cobalamin synthesis protein P47K 1095177 10063226 Rpdx1_1028 Rhodopseudomonas palustris DX-1 cobalamin synthesis protein P47K YP_004107387.1 1094128 D 652103 CDS YP_004107388.1 316932406 10063227 1095174..1096193 1 NC_014834.1 PFAM: WD40 repeat, subgroup; KEGG: bja:bll7767 hypothetical protein; WD40 repeat-containing protein 1096193 10063227 Rpdx1_1029 Rhodopseudomonas palustris DX-1 WD40 repeat-containing protein YP_004107388.1 1095174 D 652103 CDS YP_004107389.1 316932407 10063228 1096228..1096950 1 NC_014834.1 PFAM: MgtC/SapB transporter; KEGG: bja:bll7766 hypothetical protein; MgtC/SapB transporter 1096950 10063228 Rpdx1_1030 Rhodopseudomonas palustris DX-1 MgtC/SapB transporter YP_004107389.1 1096228 D 652103 CDS YP_004107390.1 316932408 10063229 1097058..1097411 1 NC_014834.1 KEGG: oca:OCAR_4911 hypothetical protein; hypothetical protein 1097411 10063229 Rpdx1_1031 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107390.1 1097058 D 652103 CDS YP_004107391.1 316932409 10063230 complement(1097681..1099111) 1 NC_014834.1 KEGG: nwi:Nwi_0921 homospermidine synthase; homospermidine synthase 1099111 10063230 Rpdx1_1032 Rhodopseudomonas palustris DX-1 homospermidine synthase YP_004107391.1 1097681 R 652103 CDS YP_004107392.1 316932410 10063231 complement(1099230..1099634) 1 NC_014834.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: nha:Nham_3421 GreA/GreB family elongation factor; GreA/GreB family elongation factor 1099634 10063231 Rpdx1_1033 Rhodopseudomonas palustris DX-1 GreA/GreB family elongation factor YP_004107392.1 1099230 R 652103 CDS YP_004107393.1 316932411 10063232 complement(1099899..1100285) 1 NC_014834.1 PFAM: Endoribonuclease L-PSP; KEGG: bja:blr7761 hypothetical protein; endoribonuclease L-PSP 1100285 10063232 Rpdx1_1034 Rhodopseudomonas palustris DX-1 endoribonuclease L-PSP YP_004107393.1 1099899 R 652103 CDS YP_004107394.1 316932412 10063233 complement(1100382..1100549) 1 NC_014834.1 hypothetical protein 1100549 10063233 Rpdx1_1035 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107394.1 1100382 R 652103 CDS YP_004107395.1 316932413 10063234 complement(1100560..1101147) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr7760 hypothetical protein; N-acetyltransferase GCN5 1101147 10063234 Rpdx1_1036 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004107395.1 1100560 R 652103 CDS YP_004107396.1 316932414 10063235 complement(1101360..1102502) 1 NC_014834.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: oca:OCAR_4918 ornithine decarboxylase; Orn/DAP/Arg decarboxylase 2 1102502 10063235 Rpdx1_1037 Rhodopseudomonas palustris DX-1 Orn/DAP/Arg decarboxylase 2 YP_004107396.1 1101360 R 652103 CDS YP_004107397.1 316932415 10063236 complement(1103168..1103428) 1 NC_014834.1 KEGG: bra:BRADO6259 hypothetical protein; hypothetical protein 1103428 10063236 Rpdx1_1038 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107397.1 1103168 R 652103 CDS YP_004107398.1 316932416 10063237 1103635..1105725 1 NC_014834.1 KEGG: bja:bll7756 peptidyl-dipeptidase; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; peptidyl-dipeptidase Dcp 1105725 10063237 Rpdx1_1039 Rhodopseudomonas palustris DX-1 peptidyl-dipeptidase Dcp YP_004107398.1 1103635 D 652103 CDS YP_004107399.1 316932417 10063238 1105730..1106383 1 NC_014834.1 PFAM: protein of unknown function DUF1007; KEGG: bja:bll7755 hypothetical protein; hypothetical protein 1106383 10063238 Rpdx1_1040 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107399.1 1105730 D 652103 CDS YP_004107400.1 316932418 10063239 1106380..1107546 1 NC_014834.1 PFAM: high-affinity nickel-transporter; KEGG: bja:bll7754 hypothetical protein; high-affinity nickel-transporter 1107546 10063239 Rpdx1_1041 Rhodopseudomonas palustris DX-1 high-affinity nickel-transporter YP_004107400.1 1106380 D 652103 CDS YP_004107401.1 316932419 10063240 1107721..1108758 1 NC_014834.1 TIGRFAM: ferrochelatase; KEGG: nha:Nham_3415 ferrochelatase; PFAM: ferrochelatase; ferrochelatase 1108758 10063240 Rpdx1_1042 Rhodopseudomonas palustris DX-1 ferrochelatase YP_004107401.1 1107721 D 652103 CDS YP_004107402.1 316932420 10063241 1108982..1109983 1 NC_014834.1 KEGG: bja:bll7750 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein 1109983 10063241 Rpdx1_1043 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107402.1 1108982 D 652103 CDS YP_004107403.1 316932421 10063242 1110000..1110449 1 NC_014834.1 PFAM: protein of unknown function DUF107; KEGG: bbt:BBta_1360 hypothetical protein; hypothetical protein 1110449 10063242 Rpdx1_1044 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107403.1 1110000 D 652103 CDS YP_004107404.1 316932422 10063243 complement(1110554..1111414) 1 NC_014834.1 KEGG: bpy:Bphyt_0019 transcriptional regulator, AraC family; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1111414 10063243 Rpdx1_1045 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004107404.1 1110554 R 652103 CDS YP_004107405.1 316932423 10063244 complement(1111766..1112779) 1 NC_014834.1 TIGRFAM: KpsF/GutQ family protein; KEGG: nha:Nham_3413 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; KpsF/GutQ family protein 1112779 10063244 Rpdx1_1046 Rhodopseudomonas palustris DX-1 KpsF/GutQ family protein YP_004107405.1 1111766 R 652103 CDS YP_004107406.1 316932424 10063245 1112985..1114697 1 NC_014834.1 manually curated; KEGG: bja:bll7745 hypothetical protein; hypothetical protein 1114697 10063245 Rpdx1_1047 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107406.1 1112985 D 652103 CDS YP_004107407.1 316932425 10063246 complement(1114772..1115044) 1 NC_014834.1 KEGG: bra:BRADO1091 hypothetical protein; hypothetical protein 1115044 10063246 Rpdx1_1048 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107407.1 1114772 R 652103 CDS YP_004107408.1 316932426 10063247 1115218..1116726 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:bll1500 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1116726 10063247 Rpdx1_1049 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004107408.1 1115218 D 652103 CDS YP_004107409.1 316932427 10063248 complement(1116754..1117629) 1 NC_014834.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; KEGG: bbt:BBta_6959 UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 1117629 10063248 Rpdx1_1050 Rhodopseudomonas palustris DX-1 UTP-glucose-1-phosphate uridylyltransferase YP_004107409.1 1116754 R 652103 CDS YP_004107410.1 316932428 10063249 complement(1117753..1118697) 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:bll7739 lysophospholipase; alpha/beta hydrolase fold protein 1118697 10063249 Rpdx1_1051 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004107410.1 1117753 R 652103 CDS YP_004107411.1 316932429 10063250 1118914..1119390 1 NC_014834.1 PFAM: heat shock protein Hsp20; KEGG: nwi:Nwi_2952 heat shock protein HSP20; heat shock protein Hsp20 1119390 10063250 Rpdx1_1052 Rhodopseudomonas palustris DX-1 heat shock protein Hsp20 YP_004107411.1 1118914 D 652103 CDS YP_004107412.1 316932430 10063251 complement(1119490..1120266) 1 NC_014834.1 KEGG: bja:bll7742 hypothetical protein; hypothetical protein 1120266 10063251 Rpdx1_1053 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107412.1 1119490 R 652103 CDS YP_004107413.1 316932431 10063252 1120681..1125420 1 NC_014834.1 KEGG: nha:Nham_1138 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase 1125420 10063252 Rpdx1_1054 Rhodopseudomonas palustris DX-1 glutamate synthase YP_004107413.1 1120681 D 652103 CDS YP_004107414.1 316932432 10063253 1125618..1127072 1 NC_014834.1 KEGG: bbt:BBta_1370 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase small subunit 1127072 10063253 Rpdx1_1055 Rhodopseudomonas palustris DX-1 glutamate synthase small subunit YP_004107414.1 1125618 D 652103 CDS YP_004107415.1 316932433 10063254 complement(1128444..1129220) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pzu:PHZ_c1118 3-oxoacyl-[ACP] reductase; short-chain dehydrogenase/reductase SDR 1129220 10063254 Rpdx1_1056 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004107415.1 1128444 R 652103 CDS YP_004107416.1 316932434 10063255 1129361..1130095 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr1495 oxidoreductase; short-chain dehydrogenase/reductase SDR 1130095 10063255 Rpdx1_1057 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004107416.1 1129361 D 652103 CDS YP_004107417.1 316932435 10063256 complement(1130285..1131907) 1 NC_014834.1 PFAM: protein of unknown function DUF459; KEGG: bja:bll1497 hypothetical protein; hypothetical protein 1131907 10063256 Rpdx1_1058 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107417.1 1130285 R 652103 CDS YP_004107418.1 316932436 10063257 complement(1132054..1132977) 1 NC_014834.1 KEGG: bja:blr7382 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 1132977 10063257 Rpdx1_1059 Rhodopseudomonas palustris DX-1 dihydrodipicolinate synthase YP_004107418.1 1132054 R 652103 CDS YP_004107419.1 316932437 10063258 complement(1133245..1134666) 1 NC_014834.1 KEGG: bja:bll1498 transglycolase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; lytic murein transglycosylase 1134666 10063258 Rpdx1_1060 Rhodopseudomonas palustris DX-1 lytic murein transglycosylase YP_004107419.1 1133245 R 652103 CDS YP_004107420.1 316932438 10063259 1134854..1135486 1 NC_014834.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bra:BRADO6219 LysE family amino acid efflux protein; lysine exporter protein LysE/YggA 1135486 10063259 Rpdx1_1061 Rhodopseudomonas palustris DX-1 lysine exporter protein LysE/YggA YP_004107420.1 1134854 D 652103 CDS YP_004107421.1 316932439 10063260 complement(1135503..1136270) 1 NC_014834.1 PFAM: protein of unknown function DUF81; KEGG: met:M446_6144 hypothetical protein; hypothetical protein 1136270 10063260 Rpdx1_1062 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107421.1 1135503 R 652103 CDS YP_004107422.1 316932440 10063261 complement(1136303..1136734) 1 NC_014834.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mll2418 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1136734 10063261 Rpdx1_1063 Rhodopseudomonas palustris DX-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_004107422.1 1136303 R 652103 CDS YP_004107423.1 316932441 10063262 1136796..1137380 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: mlo:mlr2419 transcriptional regulator; regulatory protein TetR 1137380 10063262 Rpdx1_1064 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107423.1 1136796 D 652103 CDS YP_004107424.1 316932442 10063263 complement(1137396..1138178) 1 NC_014834.1 KEGG: bja:blr7731 inositol monophosphatase family protein; TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; histidinol-phosphate phosphatase 1138178 10063263 Rpdx1_1065 Rhodopseudomonas palustris DX-1 histidinol-phosphate phosphatase YP_004107424.1 1137396 R 652103 CDS YP_004107425.1 316932443 10063264 complement(1138296..1138418) 1 NC_014834.1 hypothetical protein 1138418 10063264 Rpdx1_1066 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107425.1 1138296 R 652103 CDS YP_004107426.1 316932444 10063265 complement(1138750..1139637) 1 NC_014834.1 PFAM: N-formylglutamate amidohydrolase; KEGG: bja:blr7730 hypothetical protein; N-formylglutamate amidohydrolase 1139637 10063265 Rpdx1_1067 Rhodopseudomonas palustris DX-1 N-formylglutamate amidohydrolase YP_004107426.1 1138750 R 652103 CDS YP_004107427.1 316932445 10063266 1139946..1140305 1 NC_014834.1 KEGG: nha:Nham_1143 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1140305 10063266 Rpdx1_1068 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004107427.1 1139946 D 652103 CDS YP_004107428.1 316932446 10063268 complement(1140563..1141186) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: rle:RL2982 TetR family transcriptional regulator; regulatory protein TetR 1141186 10063268 Rpdx1_1069 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107428.1 1140563 R 652103 CDS YP_004107429.1 316932447 10063269 1141415..1141951 1 NC_014834.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: rce:RC1_3068 oxidoreductase with iron-sulfur subunit, putative; (2Fe-2S)-binding domain-containing protein 1141951 10063269 Rpdx1_1070 Rhodopseudomonas palustris DX-1 (2Fe-2S)-binding domain-containing protein YP_004107429.1 1141415 D 652103 CDS YP_004107430.1 316932448 10063270 1141948..1143015 1 NC_014834.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rce:RC1_3069 xanthine dehydrogenase YagS FAD-binding subunit,putative; FAD-binding molybdopterin dehydrogenase protein 1143015 10063270 Rpdx1_1071 Rhodopseudomonas palustris DX-1 FAD-binding molybdopterin dehydrogenase protein YP_004107430.1 1141948 D 652103 CDS YP_004107431.1 316932449 10063271 1142984..1145263 1 NC_014834.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rce:RC1_3070 xanthine dehydrogenase YagR molybdenum-binding subunit, putative; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 1145263 10063271 Rpdx1_1072 Rhodopseudomonas palustris DX-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_004107431.1 1142984 D 652103 CDS YP_004107432.1 316932450 10063272 complement(1145406..1145555) 1 NC_014834.1 KEGG: bbt:BBta_1649 hypothetical protein; hypothetical protein 1145555 10063272 Rpdx1_1073 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107432.1 1145406 R 652103 CDS YP_004107433.1 316932451 10063273 complement(1145705..1146304) 1 NC_014834.1 KEGG: bbt:BBta_1650 TrpR binding protein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavoprotein WrbA 1146304 10063273 Rpdx1_1074 Rhodopseudomonas palustris DX-1 flavoprotein WrbA YP_004107433.1 1145705 R 652103 CDS YP_004107434.1 316932452 10063274 complement(1146470..1147168) 1 NC_014834.1 PFAM: Pirin domain protein; KEGG: bbt:BBta_1651 putative pirin family protein; Pirin domain-containing protein 1147168 10063274 Rpdx1_1075 Rhodopseudomonas palustris DX-1 Pirin domain-containing protein YP_004107434.1 1146470 R 652103 CDS YP_004107435.1 316932453 10063275 1147300..1148223 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:bll7565 transcriptional regulatory protein; LysR family transcriptional regulator 1148223 10063275 Rpdx1_1076 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107435.1 1147300 D 652103 CDS YP_004107436.1 316932454 10063276 complement(1148238..1149071) 1 NC_014834.1 KEGG: bja:bll1491 hypothetical protein; hypothetical protein 1149071 10063276 Rpdx1_1077 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107436.1 1148238 R 652103 CDS YP_004107437.1 316932455 10063277 1149207..1149860 1 NC_014834.1 PFAM: protein of unknown function DUF179; KEGG: nha:Nham_3550 hypothetical protein; hypothetical protein 1149860 10063277 Rpdx1_1078 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107437.1 1149207 D 652103 CDS YP_004107438.1 316932456 10063278 complement(1150050..1152929) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; Diverse 7TM receptor transmembrane region; Diverse 7TM receptor extracellular region 2; PAS fold-3 domain protein; GGDEF domain containing protein; KEGG: bja:bll1502 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase 1152929 10063278 Rpdx1_1079 Rhodopseudomonas palustris DX-1 PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase YP_004107438.1 1150050 R 652103 CDS YP_004107439.1 316932457 10063279 complement(1153051..1154049) 1 NC_014834.1 KEGG: bra:BRADO1103 putative NADPH quinone oxidoreductase; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; NAD(P)H quinone oxidoreductase 1154049 10063279 Rpdx1_1080 Rhodopseudomonas palustris DX-1 NAD(P)H quinone oxidoreductase YP_004107439.1 1153051 R 652103 CDS YP_004107440.1 316932458 10063280 1154162..1154353 1 NC_014834.1 PFAM: protein of unknown function DUF1192; KEGG: bja:bsr1504 hypothetical protein; hypothetical protein 1154353 10063280 Rpdx1_1081 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107440.1 1154162 D 652103 CDS YP_004107441.1 316932459 10063281 1154772..1155281 1 NC_014834.1 PFAM: protein of unknown function DUF1465; KEGG: bra:BRADO1105 hypothetical protein; hypothetical protein 1155281 10063281 Rpdx1_1082 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107441.1 1154772 D 652103 CDS YP_004107442.1 316932460 10063282 complement(1155484..1155711) 1 NC_014834.1 KEGG: bbt:BBta_6943 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 1155711 10063282 Rpdx1_1083 Rhodopseudomonas palustris DX-1 50S ribosomal protein L31 YP_004107442.1 1155484 R 652103 CDS YP_004107443.1 316932461 10063283 1155910..1157814 1 NC_014834.1 TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: nwi:Nwi_2746 ABC transporter, ATP-binding/permease protein; SMART: AAA ATPase; lipid A ABC exporter family, fused ATPase and inner membrane subunits 1157814 10063283 Rpdx1_1084 Rhodopseudomonas palustris DX-1 lipid A ABC exporter family, fused ATPase and inner membrane subunits YP_004107443.1 1155910 D 652103 CDS YP_004107444.1 316932462 10063284 complement(1157823..1158116) 1 NC_014834.1 PFAM: plasmid stabilization system; KEGG: rle:pRL70123 putative stabilisation protein; plasmid stabilization system 1158116 10063284 Rpdx1_1085 Rhodopseudomonas palustris DX-1 plasmid stabilization system YP_004107444.1 1157823 R 652103 CDS YP_004107445.1 316932463 10063285 complement(1158113..1158340) 1 NC_014834.1 KEGG: mea:Mex_1p4309 hypothetical protein; hypothetical protein 1158340 10063285 Rpdx1_1086 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107445.1 1158113 R 652103 CDS YP_004107446.1 316932464 10063286 complement(1158378..1158839) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_3543 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1158839 10063286 Rpdx1_1087 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004107446.1 1158378 R 652103 CDS YP_004107447.1 316932465 10063287 complement(1158917..1159942) 1 NC_014834.1 PFAM: OmpA/MotB domain protein; KEGG: bja:bll1510 hypothetical protein; OmpA/MotB domain-containing protein 1159942 10063287 Rpdx1_1088 Rhodopseudomonas palustris DX-1 OmpA/MotB domain-containing protein YP_004107447.1 1158917 R 652103 CDS YP_004107448.1 316932466 10063288 complement(1159942..1160940) 1 NC_014834.1 KEGG: bja:bll1511 hypothetical protein; hypothetical protein 1160940 10063288 Rpdx1_1089 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107448.1 1159942 R 652103 CDS YP_004107449.1 316932467 10063289 1161122..1161949 1 NC_014834.1 PFAM: protein of unknown function DUF1295; KEGG: bbt:BBta_6937 hypothetical protein; hypothetical protein 1161949 10063289 Rpdx1_1090 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107449.1 1161122 D 652103 CDS YP_004107450.1 316932468 10063290 1161946..1162971 1 NC_014834.1 PFAM: Methyltransferase type 11; KEGG: bra:BRADO1113 putative cyclopropane-fatty-acyl-phospholipid synthase; type 11 methyltransferase 1162971 10063290 Rpdx1_1091 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004107450.1 1161946 D 652103 CDS YP_004107451.1 316932469 10063291 1163252..1163443 1 NC_014834.1 KEGG: hha:Hhal_2261 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; hypothetical protein 1163443 10063291 Rpdx1_1092 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107451.1 1163252 D 652103 CDS YP_004107452.1 316932470 10063292 1163531..1163731 1 NC_014834.1 KEGG: fre:Franean1_5996 hypothetical protein; hypothetical protein 1163731 10063292 Rpdx1_1093 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107452.1 1163531 D 652103 CDS YP_004107453.1 316932471 10063293 complement(1163818..1164027) 1 NC_014834.1 KEGG: xau:Xaut_0314 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 1164027 10063293 Rpdx1_1094 Rhodopseudomonas palustris DX-1 XRE family transcriptional regulator YP_004107453.1 1163818 R 652103 CDS YP_004107454.1 316932472 10063294 complement(1164031..1164609) 1 NC_014834.1 KEGG: xau:Xaut_0315 hypothetical protein; hypothetical protein 1164609 10063294 Rpdx1_1095 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107454.1 1164031 R 652103 CDS YP_004107455.1 316932473 10063295 1164688..1165266 1 NC_014834.1 KEGG: mno:Mnod_0507 hypothetical protein; hypothetical protein 1165266 10063295 Rpdx1_1096 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107455.1 1164688 D 652103 CDS YP_004107456.1 316932474 10063296 complement(1165485..1166087) 1 NC_014834.1 KEGG: bja:blr7630 decarboxylase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1166087 10063296 Rpdx1_1097 Rhodopseudomonas palustris DX-1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_004107456.1 1165485 R 652103 CDS YP_004107457.1 316932475 10063297 complement(1166084..1167622) 1 NC_014834.1 KEGG: bja:blr7629 hypothetical protein; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase 1167622 10063297 Rpdx1_1098 Rhodopseudomonas palustris DX-1 UbiD family decarboxylase YP_004107457.1 1166084 R 652103 CDS YP_004107458.1 316932476 10063298 1167774..1168283 1 NC_014834.1 KEGG: oca:OCAR_5036 sterol binding protein; sterol-binding protein 1168283 10063298 Rpdx1_1099 Rhodopseudomonas palustris DX-1 sterol-binding protein YP_004107458.1 1167774 D 652103 CDS YP_004107459.1 316932477 10063299 1168287..1169264 1 NC_014834.1 PFAM: peptidase U32; KEGG: oca:OCAR_5037 peptidase U32; peptidase U32 1169264 10063299 Rpdx1_1100 Rhodopseudomonas palustris DX-1 peptidase U32 YP_004107459.1 1168287 D 652103 CDS YP_004107460.1 316932478 10063300 1169333..1170253 1 NC_014834.1 PFAM: peptidase U32; KEGG: oca:OCAR_5038 peptidase U32; peptidase U32 1170253 10063300 Rpdx1_1101 Rhodopseudomonas palustris DX-1 peptidase U32 YP_004107460.1 1169333 D 652103 CDS YP_004107461.1 316932479 10063301 complement(1170618..1171406) 1 NC_014834.1 PFAM: inositol monophosphatase; KEGG: oca:OCAR_7316 inositol-1-monophosphatase (IMPase); inositol monophosphatase 1171406 10063301 Rpdx1_1102 Rhodopseudomonas palustris DX-1 inositol monophosphatase YP_004107461.1 1170618 R 652103 CDS YP_004107462.1 316932480 10063302 complement(1171510..1172604) 1 NC_014834.1 KEGG: nha:Nham_3536 Sel1; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 1172604 10063302 Rpdx1_1103 Rhodopseudomonas palustris DX-1 Sel1 domain-containing protein repeat-containing protein YP_004107462.1 1171510 R 652103 CDS YP_004107463.1 316932481 10063303 complement(1172621..1173280) 1 NC_014834.1 PFAM: thiamine monophosphate synthase; KEGG: nha:Nham_3535 thiamine monophosphate synthase; thiamine monophosphate synthase 1173280 10063303 Rpdx1_1104 Rhodopseudomonas palustris DX-1 thiamine monophosphate synthase YP_004107463.1 1172621 R 652103 CDS YP_004107464.1 316932482 10063304 complement(1173286..1174320) 1 NC_014834.1 KEGG: oca:OCAR_7313 fructose-bisphosphate aldolase class-I; PFAM: fructose-bisphosphate aldolase class-I; fructose-bisphosphate aldolase 1174320 10063304 Rpdx1_1105 Rhodopseudomonas palustris DX-1 fructose-bisphosphate aldolase YP_004107464.1 1173286 R 652103 CDS YP_004107465.1 316932483 10063305 complement(1174942..1176138) 1 NC_014834.1 KEGG: nwi:Nwi_2736 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; phosphoglycerate kinase 1176138 10063305 Rpdx1_1106 Rhodopseudomonas palustris DX-1 phosphoglycerate kinase YP_004107465.1 1174942 R 652103 CDS YP_004107466.1 316932484 10063306 complement(1176311..1177318) 1 NC_014834.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: bra:BRADO1124 glyceraldehyde-3-phosphate dehydrogenase (GAPDH); PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase 1177318 10063306 Rpdx1_1107 Rhodopseudomonas palustris DX-1 glyceraldehyde-3-phosphate dehydrogenase YP_004107466.1 1176311 R 652103 CDS YP_004107467.1 316932485 10063307 complement(1177533..1179518) 1 NC_014834.1 KEGG: nwi:Nwi_2734 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; transketolase 1179518 10063307 Rpdx1_1108 Rhodopseudomonas palustris DX-1 transketolase YP_004107467.1 1177533 R 652103 CDS YP_004107468.1 316932486 10063308 1179843..1180187 1 NC_014834.1 KEGG: nha:Nham_3530 hypothetical protein; hypothetical protein 1180187 10063308 Rpdx1_1109 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107468.1 1179843 D 652103 CDS YP_004107469.1 316932487 10063309 1180184..1180594 1 NC_014834.1 PFAM: protein of unknown function DUF710; KEGG: bbt:BBta_6921 cell division protein ZapA; hypothetical protein 1180594 10063309 Rpdx1_1110 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107469.1 1180184 D 652103 CDS YP_004107470.1 316932488 10063310 complement(1180949..1182190) 1 NC_014834.1 PFAM: (Uracil-5)-methyltransferase; KEGG: bra:BRADO2158 putative RNA methyltransferase; (uracil-5)-methyltransferase 1182190 10063310 Rpdx1_1111 Rhodopseudomonas palustris DX-1 (uracil-5)-methyltransferase YP_004107470.1 1180949 R 652103 CDS YP_004107471.1 316932489 10063311 complement(1182237..1183661) 1 NC_014834.1 KEGG: bja:bll0821 multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1183661 10063311 Rpdx1_1112 Rhodopseudomonas palustris DX-1 MATE efflux family protein YP_004107471.1 1182237 R 652103 CDS YP_004107472.1 316932490 10063312 complement(1183717..1184457) 1 NC_014834.1 KEGG: nha:Nham_0777 hemolysin A; TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; hemolysin A 1184457 10063312 Rpdx1_1113 Rhodopseudomonas palustris DX-1 hemolysin A YP_004107472.1 1183717 R 652103 CDS YP_004107473.1 316932491 10063313 complement(1184461..1185030) 1 NC_014834.1 PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: bbt:BBta_2478 putative nucleoside 2-deoxyribosyltransferase; nucleoside 2-deoxyribosyltransferase 1185030 10063313 Rpdx1_1114 Rhodopseudomonas palustris DX-1 nucleoside 2-deoxyribosyltransferase YP_004107473.1 1184461 R 652103 CDS YP_004107474.1 316932492 10063314 complement(1185209..1187134) 1 NC_014834.1 KEGG: nha:Nham_0778 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; deoxyxylulose-5-phosphate synthase 1187134 10063314 Rpdx1_1115 Rhodopseudomonas palustris DX-1 deoxyxylulose-5-phosphate synthase YP_004107474.1 1185209 R 652103 CDS YP_004107475.1 316932493 10063315 complement(1187546..1187797) 1 NC_014834.1 KEGG: nha:Nham_0779 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 1187797 10063315 Rpdx1_1116 Rhodopseudomonas palustris DX-1 exodeoxyribonuclease VII small subunit YP_004107475.1 1187546 R 652103 CDS YP_004107476.1 316932494 10063316 complement(1187879..1188808) 1 NC_014834.1 PFAM: histone deacetylase superfamily; KEGG: bja:bll2653 hypothetical protein; histone deacetylase superfamily protein 1188808 10063316 Rpdx1_1117 Rhodopseudomonas palustris DX-1 histone deacetylase superfamily protein YP_004107476.1 1187879 R 652103 CDS YP_004107477.1 316932495 10063317 complement(1188921..1190603) 1 NC_014834.1 PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: bja:bll2654 putative 5'-nucleotidase family protein; 5'-nucleotidase domain-containing protein 1190603 10063317 Rpdx1_1118 Rhodopseudomonas palustris DX-1 5'-nucleotidase domain-containing protein YP_004107477.1 1188921 R 652103 CDS YP_004107478.1 316932496 10063318 1190828..1191304 1 NC_014834.1 KEGG: bra:BRADO3396 putative signal peptide; hypothetical protein 1191304 10063318 Rpdx1_1119 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107478.1 1190828 D 652103 CDS YP_004107479.1 316932497 10063319 1191816..1193519 1 NC_014834.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: nha:Nham_2994 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 1193519 10063319 Rpdx1_1120 Rhodopseudomonas palustris DX-1 potassium-transporting ATPase subunit A YP_004107479.1 1191816 D 652103 CDS YP_004107480.1 316932498 10063320 1193530..1195602 1 NC_014834.1 KEGG: nha:Nham_2993 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; K+-transporting ATPase subunit B 1195602 10063320 Rpdx1_1121 Rhodopseudomonas palustris DX-1 K+-transporting ATPase subunit B YP_004107480.1 1193530 D 652103 CDS YP_004107481.1 316932499 10063321 1195616..1196218 1 NC_014834.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: nha:Nham_2992 potassium-transporting ATPase subunit C; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 1196218 10063321 Rpdx1_1122 Rhodopseudomonas palustris DX-1 potassium-transporting ATPase subunit C YP_004107481.1 1195616 D 652103 CDS YP_004107482.1 316932500 10063322 1196234..1198924 1 NC_014834.1 KEGG: nha:Nham_2991 osmosensitive K+ channel signal transduction histidine kinase; PFAM: Osmosensitive K channel His kinase sensor; UspA domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; osmosensitive K channel signal transduction histidine kinase 1198924 10063322 Rpdx1_1123 Rhodopseudomonas palustris DX-1 osmosensitive K channel signal transduction histidine kinase YP_004107482.1 1196234 D 652103 CDS YP_004107483.1 316932501 10063323 1198921..1199625 1 NC_014834.1 KEGG: nha:Nham_2990 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 1199625 10063323 Rpdx1_1124 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004107483.1 1198921 D 652103 CDS YP_004107484.1 316932502 10063324 complement(1199756..1200517) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nha:Nham_0781 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1200517 10063324 Rpdx1_1125 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004107484.1 1199756 R 652103 CDS YP_004107485.1 316932503 10063325 complement(1200581..1202362) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_2498 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1202362 10063325 Rpdx1_1126 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004107485.1 1200581 R 652103 CDS YP_004107486.1 316932504 10063327 complement(1202765..1206313) 1 NC_014834.1 TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; KEGG: rle:pRL90293 putative UreA amidolyase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; urea carboxylase 1206313 10063327 Rpdx1_1127 Rhodopseudomonas palustris DX-1 urea carboxylase YP_004107486.1 1202765 R 652103 CDS YP_004107487.1 316932505 10063328 complement(1206316..1206951) 1 NC_014834.1 KEGG: rlg:Rleg_6106 UreA carboxylase-associated protein 1; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989; urea carboxylase-associated protein 1 1206951 10063328 Rpdx1_1128 Rhodopseudomonas palustris DX-1 urea carboxylase-associated protein 1 YP_004107487.1 1206316 R 652103 CDS YP_004107488.1 316932506 10063329 complement(1206954..1207793) 1 NC_014834.1 KEGG: xau:Xaut_1224 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989; urea carboxylase-associated protein 2 1207793 10063329 Rpdx1_1129 Rhodopseudomonas palustris DX-1 urea carboxylase-associated protein 2 YP_004107488.1 1206954 R 652103 CDS YP_004107489.1 316932507 10063330 complement(1207832..1208623) 1 NC_014834.1 KEGG: azc:AZC_4399 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1208623 10063330 Rpdx1_1130 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107489.1 1207832 R 652103 CDS YP_004107490.1 316932508 10063331 complement(1208620..1209438) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1226 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 1209438 10063331 Rpdx1_1131 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004107490.1 1208620 R 652103 CDS YP_004107491.1 316932509 10063332 complement(1209474..1210544) 1 NC_014834.1 KEGG: xau:Xaut_1227 NlpA lipoprotein; TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region; PFAM: NLPA lipoprotein; ABC transporter substrate-binding protein 1210544 10063332 Rpdx1_1132 Rhodopseudomonas palustris DX-1 ABC transporter substrate-binding protein YP_004107491.1 1209474 R 652103 CDS YP_004107492.1 316932510 10063333 1210946..1213333 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bja:blr5269 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver; PAS/PAC sensor hybrid histidine kinase 1213333 10063333 Rpdx1_1133 Rhodopseudomonas palustris DX-1 PAS/PAC sensor hybrid histidine kinase YP_004107492.1 1210946 D 652103 CDS YP_004107493.1 316932511 10063334 complement(1213358..1214152) 1 NC_014834.1 TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bja:blr1071 transcriptional regulatory protein; SMART: regulatory protein IclR; IclR family transcriptional regulator 1214152 10063334 Rpdx1_1134 Rhodopseudomonas palustris DX-1 IclR family transcriptional regulator YP_004107493.1 1213358 R 652103 CDS YP_004107494.1 316932512 10063335 1214514..1215872 1 NC_014834.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:bll1070 dioxygenase; Rieske (2Fe-2S) iron-sulfur domain 1215872 10063335 Rpdx1_1135 Rhodopseudomonas palustris DX-1 Rieske (2Fe-2S) iron-sulfur domain YP_004107494.1 1214514 D 652103 CDS YP_004107495.1 316932513 10063336 1215869..1217329 1 NC_014834.1 PFAM: glutamine synthetase catalytic region; KEGG: mno:Mnod_8463 glutamine synthetase catalytic region; glutamine synthetase 1217329 10063336 Rpdx1_1136 Rhodopseudomonas palustris DX-1 glutamine synthetase YP_004107495.1 1215869 D 652103 CDS YP_004107496.1 316932514 10063337 1217378..1218553 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bov:BOV_A0610 amino acid ABC transporter, periplasmic amino-acid binding protein; extracellular ligand-binding receptor 1218553 10063337 Rpdx1_1137 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004107496.1 1217378 D 652103 CDS YP_004107497.1 316932515 10063338 1218933..1219799 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bmr:BMI_II646 branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 1219799 10063338 Rpdx1_1138 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004107497.1 1218933 D 652103 CDS YP_004107498.1 316932516 10063339 1219801..1220799 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: ara:Arad_9508 branched-chain amino acid ABC transporter; inner-membrane translocator 1220799 10063339 Rpdx1_1139 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004107498.1 1219801 D 652103 CDS YP_004107499.1 316932517 10063340 1220796..1221560 1 NC_014834.1 KEGG: azl:AZL_d00570 branched-chain amino acid transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1221560 10063340 Rpdx1_1140 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107499.1 1220796 D 652103 CDS YP_004107500.1 316932518 10063341 1221541..1222254 1 NC_014834.1 KEGG: rec:RHECIAT_CH0003687 probable branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1222254 10063341 Rpdx1_1141 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107500.1 1221541 D 652103 CDS YP_004107501.1 316932519 10063342 complement(1222276..1224813) 1 NC_014834.1 KEGG: atc:AGR_C_3927 hypothetical protein; PFAM: PAS fold-2 domain protein; GAF domain protein; Phytochrome central region domain protein; HWE histidine kinase; response regulator receiver; SMART: GAF domain protein; response regulator receiver; putative PAS/PAC sensor protein 1224813 10063342 Rpdx1_1142 Rhodopseudomonas palustris DX-1 putative PAS/PAC sensor protein YP_004107501.1 1222276 R 652103 CDS YP_004107502.1 316932520 10063343 1225077..1225820 1 NC_014834.1 SMART: regulatory protein Crp; KEGG: bja:blr0536 transcriptional regulatory protein; putative Crp/Fnr family transcriptional regulator 1225820 10063343 Rpdx1_1143 Rhodopseudomonas palustris DX-1 putative Crp/Fnr family transcriptional regulator YP_004107502.1 1225077 D 652103 CDS YP_004107503.1 316932521 10063344 complement(1225875..1226606) 1 NC_014834.1 PFAM: cyclic nucleotide-binding; KEGG: bbt:BBta_6056 Crp/FNR family transcriptional regulator; Crp/Fnr family transcriptional regulator 1226606 10063344 Rpdx1_1144 Rhodopseudomonas palustris DX-1 Crp/Fnr family transcriptional regulator YP_004107503.1 1225875 R 652103 CDS YP_004107504.1 316932522 10063345 1226780..1227349 1 NC_014834.1 PFAM: Phosphoglycerate mutase; KEGG: bja:bll327 cobalamin synthesis protein; phosphoglycerate mutase 1227349 10063345 Rpdx1_1145 Rhodopseudomonas palustris DX-1 phosphoglycerate mutase YP_004107504.1 1226780 D 652103 CDS YP_004107505.1 316932523 10063346 1227794..1228129 1 NC_014834.1 KEGG: rsq:Rsph17025_3448 hypothetical protein; hypothetical protein 1228129 10063346 Rpdx1_1146 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107505.1 1227794 D 652103 CDS YP_004107506.1 316932524 10063347 complement(1228195..1229340) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pla:Plav_0463 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase domain-containing protein 1229340 10063347 Rpdx1_1147 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004107506.1 1228195 R 652103 CDS YP_004107507.1 316932525 10063348 complement(1229505..1229948) 1 NC_014834.1 KEGG: bbt:BBta_7584 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 1229948 10063348 Rpdx1_1148 Rhodopseudomonas palustris DX-1 regulatory protein MarR YP_004107507.1 1229505 R 652103 CDS YP_004107508.1 316932526 10063349 1230107..1231291 1 NC_014834.1 KEGG: bja:bll0199 nitrile hydratase regulator; nitrile hydratase regulator 1231291 10063349 Rpdx1_1149 Rhodopseudomonas palustris DX-1 nitrile hydratase regulator YP_004107508.1 1230107 D 652103 CDS YP_004107509.1 316932527 10063350 1231455..1232969 1 NC_014834.1 PFAM: Amidase; KEGG: bja:bll0198 amidase; amidase 1232969 10063350 Rpdx1_1150 Rhodopseudomonas palustris DX-1 amidase YP_004107509.1 1231455 D 652103 CDS YP_004107510.1 316932528 10063351 1233005..1233862 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bja:bll0197 ABC transporter permease protein; inner-membrane translocator 1233862 10063351 Rpdx1_1151 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004107510.1 1233005 D 652103 CDS YP_004107511.1 316932529 10063352 1233867..1235090 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:bll0196 ABC transporter substrate-binding protein; extracellular ligand-binding receptor 1235090 10063352 Rpdx1_1152 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004107511.1 1233867 D 652103 CDS YP_004107512.1 316932530 10063353 1235407..1236399 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bja:bll0195 ABC transporter permease protein; inner-membrane translocator 1236399 10063353 Rpdx1_1153 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004107512.1 1235407 D 652103 CDS YP_004107513.1 316932531 10063354 1236386..1237120 1 NC_014834.1 KEGG: bja:bll0194 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1237120 10063354 Rpdx1_1154 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107513.1 1236386 D 652103 CDS YP_004107514.1 316932532 10063355 1237113..1237814 1 NC_014834.1 KEGG: bja:bll0193 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1237814 10063355 Rpdx1_1155 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107514.1 1237113 D 652103 CDS YP_004107515.1 316932533 10063356 complement(1237934..1238803) 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:bll2527 putative hydrolase; alpha/beta hydrolase fold protein 1238803 10063356 Rpdx1_1156 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004107515.1 1237934 R 652103 CDS YP_004107516.1 316932534 10063357 1239034..1239462 1 NC_014834.1 KEGG: mdi:METDI0764 transcriptional regulator, ArsR family; putative SoxR protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 1239462 10063357 Rpdx1_1157 Rhodopseudomonas palustris DX-1 regulatory protein ArsR YP_004107516.1 1239034 D 652103 CDS YP_004107517.1 316932535 10063358 complement(1239476..1239850) 1 NC_014834.1 KEGG: rme:Rmet_2371 rhodanese-like protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 1239850 10063358 Rpdx1_1158 Rhodopseudomonas palustris DX-1 rhodanese domain-containing protein YP_004107517.1 1239476 R 652103 CDS YP_004107518.1 316932536 10063359 complement(1239904..1241031) 1 NC_014834.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pyridine nucleotide-disulfide oxidoreductase family protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1241031 10063359 Rpdx1_1159 Rhodopseudomonas palustris DX-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004107518.1 1239904 R 652103 CDS YP_004107519.1 316932537 10063360 1241226..1241840 1 NC_014834.1 PFAM: Methyltransferase type 12; KEGG: tbd:Tbd_2330 hypothetical protein; type 12 methyltransferase 1241840 10063360 Rpdx1_1160 Rhodopseudomonas palustris DX-1 type 12 methyltransferase YP_004107519.1 1241226 D 652103 CDS YP_004107520.1 316932538 10063361 complement(1241848..1242243) 1 NC_014834.1 KEGG: azl:AZL_007750 nitrogenase-associated protein; TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; nitrogenase-associated protein 1242243 10063361 Rpdx1_1161 Rhodopseudomonas palustris DX-1 nitrogenase-associated protein YP_004107520.1 1241848 R 652103 CDS YP_004107521.1 316932539 10063362 complement(1242255..1242845) 1 NC_014834.1 PFAM: Protein of unknown function DUF2478; KEGG: bja:blr6953 molybdenum ABC transporter ATP-binding protein; hypothetical protein 1242845 10063362 Rpdx1_1162 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107521.1 1242255 R 652103 CDS YP_004107522.1 316932540 10063363 1243092..1243934 1 NC_014834.1 KEGG: bja:bll6950 putative pyrophosphorylase; TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; modD protein 1243934 10063363 Rpdx1_1163 Rhodopseudomonas palustris DX-1 modD protein YP_004107522.1 1243092 D 652103 CDS YP_004107523.1 316932541 10063364 complement(1243883..1244143) 1 NC_014834.1 KEGG: der:Dere_GG20400 GG20400 gene product from transcript GG20400-RA; hypothetical protein 1244143 10063364 Rpdx1_1164 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107523.1 1243883 R 652103 CDS YP_004107524.1 316932542 10063365 complement(1244188..1245822) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: xau:Xaut_4075 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1245822 10063365 Rpdx1_1165 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004107524.1 1244188 R 652103 CDS YP_004107525.1 316932543 10063366 1246067..1246273 1 NC_014834.1 KEGG: bra:BRADO2820 hypothetical protein; hypothetical protein 1246273 10063366 Rpdx1_1166 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107525.1 1246067 D 652103 CDS YP_004107526.1 316932544 10063367 1246391..1247011 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: bja:bll6630 hypothetical protein; NUDIX hydrolase 1247011 10063367 Rpdx1_1167 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004107526.1 1246391 D 652103 CDS YP_004107527.1 316932545 10063368 1247149..1247523 1 NC_014834.1 PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit; KEGG: bbt:BBta_2733 protocatechuate 4,5-dioxygenase subunit alpha; extradiol ring-cleavage dioxygenase LigAB LigA subunit 1247523 10063368 Rpdx1_1168 Rhodopseudomonas palustris DX-1 extradiol ring-cleavage dioxygenase LigAB LigA subunit YP_004107527.1 1247149 D 652103 CDS YP_004107528.1 316932546 10063369 1247536..1248393 1 NC_014834.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bbt:BBta_2734 protocatechuate 4,5-dioxygenase subunit beta; extradiol ring-cleavage dioxygenase class III protein subunit B 1248393 10063369 Rpdx1_1169 Rhodopseudomonas palustris DX-1 extradiol ring-cleavage dioxygenase class III protein subunit B YP_004107528.1 1247536 D 652103 CDS YP_004107529.1 316932547 10063370 1248607..1249794 1 NC_014834.1 PFAM: cytochrome P450; KEGG: bra:BRADO2350 putative cytochrome P450; cytochrome P450 1249794 10063370 Rpdx1_1170 Rhodopseudomonas palustris DX-1 cytochrome P450 YP_004107529.1 1248607 D 652103 CDS YP_004107530.1 316932548 10063371 complement(1249798..1250091) 1 NC_014834.1 KEGG: bra:BRADO5343 hypothetical protein; hypothetical protein 1250091 10063371 Rpdx1_1171 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107530.1 1249798 R 652103 CDS YP_004107531.1 316932549 10063372 1250332..1251096 1 NC_014834.1 PFAM: protein of unknown function DUF81; KEGG: mlo:mll3907 putative integral membrane protein; hypothetical protein 1251096 10063372 Rpdx1_1172 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107531.1 1250332 D 652103 CDS YP_004107532.1 316932550 10063373 complement(1251117..1252559) 1 NC_014834.1 TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: bra:BRADO3206 nitrogen fixation protein FixG; cytochrome c oxidase accessory protein CcoG 1252559 10063373 Rpdx1_1173 Rhodopseudomonas palustris DX-1 cytochrome c oxidase accessory protein CcoG YP_004107532.1 1251117 R 652103 CDS YP_004107533.1 316932551 10063374 complement(1252678..1252878) 1 NC_014834.1 KEGG: bja:bsr3073 hypothetical protein; hypothetical protein 1252878 10063374 Rpdx1_1174 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107533.1 1252678 R 652103 CDS YP_004107534.1 316932552 10063375 1253178..1253858 1 NC_014834.1 PFAM: transcriptional regulator PadR family protein; KEGG: xau:Xaut_0164 PadR-like family transcriptional regulator; PadR-like family transcriptional regulator 1253858 10063375 Rpdx1_1175 Rhodopseudomonas palustris DX-1 PadR-like family transcriptional regulator YP_004107534.1 1253178 D 652103 CDS YP_004107535.1 316932553 10063376 1253855..1254388 1 NC_014834.1 KEGG: bbt:BBta_p0097 ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1254388 10063376 Rpdx1_1176 Rhodopseudomonas palustris DX-1 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_004107535.1 1253855 D 652103 CDS YP_004107536.1 316932554 10063377 1254563..1254955 1 NC_014834.1 KEGG: rsq:Rsph17025_1840 hypothetical protein; hypothetical protein 1254955 10063377 Rpdx1_1177 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107536.1 1254563 D 652103 CDS YP_004107537.1 316932555 10063378 complement(1255173..1255376) 1 NC_014834.1 KEGG: bra:BRADO4593 hypothetical protein; hypothetical protein 1255376 10063378 Rpdx1_1178 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107537.1 1255173 R 652103 CDS YP_004107538.1 316932556 10063379 1255490..1255810 1 NC_014834.1 KEGG: bja:bll5773 transcriptional regulatory protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 1255810 10063379 Rpdx1_1179 Rhodopseudomonas palustris DX-1 regulatory protein ArsR YP_004107538.1 1255490 D 652103 CDS YP_004107539.1 316932557 10063380 1255812..1256810 1 NC_014834.1 KEGG: bbt:BBta_3720 RND family efflux pump membrane fusion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1256810 10063380 Rpdx1_1180 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004107539.1 1255812 D 652103 CDS YP_004107540.1 316932558 10063381 1256807..1260031 1 NC_014834.1 PFAM: acriflavin resistance protein; KEGG: bja:bll5771 AcrB/AcrD/AcrF family cation efflux protein; acriflavin resistance protein 1260031 10063381 Rpdx1_1181 Rhodopseudomonas palustris DX-1 acriflavin resistance protein YP_004107540.1 1256807 D 652103 CDS YP_004107541.1 316932559 10063382 1260106..1260759 1 NC_014834.1 PFAM: DSBA oxidoreductase; KEGG: bja:blr1349 hypothetical protein; DSBA oxidoreductase 1260759 10063382 Rpdx1_1182 Rhodopseudomonas palustris DX-1 DSBA oxidoreductase YP_004107541.1 1260106 D 652103 CDS YP_004107542.1 316932560 10063383 1260925..1261236 1 NC_014834.1 KEGG: app:CAP2UW1_2673 hypothetical protein; hypothetical protein 1261236 10063383 Rpdx1_1183 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107542.1 1260925 D 652103 CDS YP_004107543.1 316932561 10063384 1261241..1262506 1 NC_014834.1 PFAM: Ferric reductase domain protein transmembrane component domain; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: app:CAP2UW1_2674 ferric reductase domain protein protein transmembrane component domain protein; ferric reductase domain-containing transmembrane protein 1262506 10063384 Rpdx1_1184 Rhodopseudomonas palustris DX-1 ferric reductase domain-containing transmembrane protein YP_004107543.1 1261241 D 652103 CDS YP_004107544.1 316932562 10063385 1262503..1262865 1 NC_014834.1 PFAM: cytochrome b5; KEGG: app:CAP2UW1_2675 cytochrome b5; cytochrome b5 1262865 10063385 Rpdx1_1185 Rhodopseudomonas palustris DX-1 cytochrome b5 YP_004107544.1 1262503 D 652103 CDS YP_004107545.1 316932563 10063386 complement(1262967..1264097) 1 NC_014834.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: nha:Nham_3225 DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein 1264097 10063386 Rpdx1_1186 Rhodopseudomonas palustris DX-1 DNA methylase N-4/N-6 domain-containing protein YP_004107545.1 1262967 R 652103 CDS YP_004107546.1 316932564 10063387 1264471..1265391 1 NC_014834.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: nwi:Nwi_2602 hypothetical protein; hypothetical protein 1265391 10063387 Rpdx1_1187 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107546.1 1264471 D 652103 CDS YP_004107547.1 316932565 10063388 1265529..1266077 1 NC_014834.1 KEGG: bja:blr2511 molybdopterin biosynthesis protein B; TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor biosynthesis protein B 1266077 10063388 Rpdx1_1188 Rhodopseudomonas palustris DX-1 molybdenum cofactor biosynthesis protein B YP_004107547.1 1265529 D 652103 CDS YP_004107548.1 316932566 10063389 1266190..1267008 1 NC_014834.1 PFAM: coenzyme A transferase; KEGG: bja:bll1293 glutaconate CoA-transferase subunit A; coenzyme A transferase 1267008 10063389 Rpdx1_1189 Rhodopseudomonas palustris DX-1 coenzyme A transferase YP_004107548.1 1266190 D 652103 CDS YP_004107549.1 316932567 10063390 1267005..1267757 1 NC_014834.1 PFAM: coenzyme A transferase; KEGG: bja:bll1292 hypothetical protein; coenzyme A transferase 1267757 10063390 Rpdx1_1190 Rhodopseudomonas palustris DX-1 coenzyme A transferase YP_004107549.1 1267005 D 652103 CDS YP_004107550.1 316932568 10063391 complement(1267807..1269156) 1 NC_014834.1 PFAM: amino acid permease-associated region; KEGG: pmy:Pmen_3544 amino acid permease-associated region; amino acid permease 1269156 10063391 Rpdx1_1191 Rhodopseudomonas palustris DX-1 amino acid permease YP_004107550.1 1267807 R 652103 CDS YP_004107551.1 316932569 10063392 complement(1269210..1269986) 1 NC_014834.1 PFAM: putative RNA methylase; KEGG: rce:RC1_1514 hypothetical protein; putative RNA methylase 1269986 10063392 Rpdx1_1192 Rhodopseudomonas palustris DX-1 putative RNA methylase YP_004107551.1 1269210 R 652103 CDS YP_004107552.1 316932570 10063393 complement(1270099..1270251) 1 NC_014834.1 KEGG: ani:AN6720.2 hypothetical protein; hypothetical protein 1270251 10063393 Rpdx1_1193 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107552.1 1270099 R 652103 CDS YP_004107553.1 316932571 10063394 complement(1270251..1271192) 1 NC_014834.1 KEGG: bja:bll2512 transcriptional regulatory protein; PFAM: regulatory protein MarR; GCN5-related N-acetyltransferase; SMART: regulatory protein MarR; MarR family transcriptional regulator with acetyltransferase activity 1271192 10063394 Rpdx1_1194 Rhodopseudomonas palustris DX-1 MarR family transcriptional regulator with acetyltransferase activity YP_004107553.1 1270251 R 652103 CDS YP_004107554.1 316932572 10063395 complement(1271357..1271923) 1 NC_014834.1 PFAM: glycosyl transferase family 2; KEGG: bja:bll2513 hypothetical protein; glycosyl transferase family 2 protein 1271923 10063395 Rpdx1_1195 Rhodopseudomonas palustris DX-1 glycosyl transferase family 2 protein YP_004107554.1 1271357 R 652103 CDS YP_004107555.1 316932573 10063396 1272106..1273266 1 NC_014834.1 KEGG: bja:blr2519 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1273266 10063396 Rpdx1_1196 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004107555.1 1272106 D 652103 CDS YP_004107556.1 316932574 10063397 1273361..1274260 1 NC_014834.1 KEGG: bbt:BBta_2343 ribonuclease HII; PFAM: ribonuclease HII/HIII; ribonuclease H 1274260 10063397 Rpdx1_1197 Rhodopseudomonas palustris DX-1 ribonuclease H YP_004107556.1 1273361 D 652103 CDS YP_004107557.1 316932575 10063398 1274331..1275839 1 NC_014834.1 KEGG: nha:Nham_3220 hypothetical protein; hypothetical protein 1275839 10063398 Rpdx1_1198 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107557.1 1274331 D 652103 CDS YP_004107558.1 316932576 10063399 complement(1275877..1278126) 1 NC_014834.1 KEGG: azc:AZC_1729 TonB-dependent siderophore receptor precursor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 1278126 10063399 Rpdx1_1199 Rhodopseudomonas palustris DX-1 TonB-dependent siderophore receptor YP_004107558.1 1275877 R 652103 CDS YP_004107559.1 316932577 10063400 complement(1278582..1279409) 1 NC_014834.1 KEGG: bra:BRADO2019 putative DNA polymerases; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-like protein 1279409 10063400 Rpdx1_1200 Rhodopseudomonas palustris DX-1 phage SPO1 DNA polymerase-like protein YP_004107559.1 1278582 R 652103 CDS YP_004107560.1 316932578 10063401 1279612..1281270 1 NC_014834.1 KEGG: bra:BRADO2020 putative electron transfer flavoprotein dehydrogenases; PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; electron-transferring-flavoprotein dehydrogenase 1281270 10063401 Rpdx1_1201 Rhodopseudomonas palustris DX-1 electron-transferring-flavoprotein dehydrogenase YP_004107560.1 1279612 D 652103 CDS YP_004107561.1 316932579 10063402 1281359..1283344 1 NC_014834.1 PFAM: TPR repeat-containing protein; KEGG: bja:blr2525 hypothetical protein; hypothetical protein 1283344 10063402 Rpdx1_1202 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107561.1 1281359 D 652103 CDS YP_004107562.1 316932580 10063403 1283461..1284360 1 NC_014834.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: nha:Nham_3216 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1284360 10063403 Rpdx1_1203 Rhodopseudomonas palustris DX-1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_004107562.1 1283461 D 652103 CDS YP_004107563.1 316932581 10063404 complement(1284502..1285512) 1 NC_014834.1 PFAM: Polyprenyl synthetase; KEGG: bbt:BBta_2349 octaprenyl diphosphate synthase; polyprenyl synthetase 1285512 10063404 Rpdx1_1204 Rhodopseudomonas palustris DX-1 polyprenyl synthetase YP_004107563.1 1284502 R 652103 CDS YP_004107564.1 316932582 10063405 1285720..1285947 1 NC_014834.1 PFAM: Protein of unknown function DUF2007; KEGG: nwi:Nwi_2591 hypothetical protein; hypothetical protein 1285947 10063405 Rpdx1_1205 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107564.1 1285720 D 652103 CDS YP_004107565.1 316932583 10063406 1285940..1286719 1 NC_014834.1 PFAM: methyltransferase small; KEGG: bra:BRADO2025 hypothetical protein; methyltransferase small 1286719 10063406 Rpdx1_1206 Rhodopseudomonas palustris DX-1 methyltransferase small YP_004107565.1 1285940 D 652103 CDS YP_004107566.1 316932584 10063407 complement(1286767..1286868) 1 NC_014834.1 KEGG: bra:BRADO2026 hypothetical protein; hypothetical protein 1286868 10063407 Rpdx1_1207 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107566.1 1286767 R 652103 CDS YP_004107567.1 316932585 10063408 1286983..1287885 1 NC_014834.1 PFAM: peptidase S49; KEGG: bja:blr2534 proteinase; peptidase S49 1287885 10063408 Rpdx1_1208 Rhodopseudomonas palustris DX-1 peptidase S49 YP_004107567.1 1286983 D 652103 CDS YP_004107568.1 316932586 10063409 1288003..1288191 1 NC_014834.1 KEGG: bbt:BBta_2354 hypothetical protein; hypothetical protein 1288191 10063409 Rpdx1_1209 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107568.1 1288003 D 652103 CDS YP_004107569.1 316932587 10063410 1288388..1289323 1 NC_014834.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: nwi:Nwi_2587 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit; glycyl-tRNA synthetase subunit alpha 1289323 10063410 Rpdx1_1210 Rhodopseudomonas palustris DX-1 glycyl-tRNA synthetase subunit alpha YP_004107569.1 1288388 D 652103 CDS YP_004107570.1 316932588 10063411 1289399..1289833 1 NC_014834.1 manually curated; KEGG: bbt:BBta_2356 hypothetical protein; hypothetical protein 1289833 10063411 Rpdx1_1211 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107570.1 1289399 D 652103 CDS YP_004107571.1 316932589 10063412 1289833..1292073 1 NC_014834.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: nwi:Nwi_2586 glycyl-tRNA synthetase subunit beta; glycyl-tRNA synthetase subunit beta 1292073 10063412 Rpdx1_1212 Rhodopseudomonas palustris DX-1 glycyl-tRNA synthetase subunit beta YP_004107571.1 1289833 D 652103 CDS YP_004107572.1 316932590 10063413 1292418..1293518 1 NC_014834.1 KEGG: cak:Caul_3593 hypothetical protein; hypothetical protein 1293518 10063413 Rpdx1_1213 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107572.1 1292418 D 652103 CDS YP_004107573.1 316932591 10063414 complement(1293532..1294809) 1 NC_014834.1 KEGG: acr:Acry_0183 membrane protein-like protein; hypothetical protein 1294809 10063414 Rpdx1_1214 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107573.1 1293532 R 652103 CDS YP_004107574.1 316932592 10063415 1295335..1295490 1 NC_014834.1 KEGG: mpo:Mpop_3015 hypothetical protein; hypothetical protein 1295490 10063415 Rpdx1_1215 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107574.1 1295335 D 652103 CDS YP_004107575.1 316932593 10063416 1295582..1298644 1 NC_014834.1 TIGRFAM: pyruvate, phosphate dikinase; KEGG: bja:blr2538 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; pyruvate, phosphate dikinase 1298644 10063416 Rpdx1_1216 Rhodopseudomonas palustris DX-1 pyruvate, phosphate dikinase YP_004107575.1 1295582 D 652103 CDS YP_004107576.1 316932594 10063417 1298964..1300409 1 NC_014834.1 PFAM: cell wall hydrolase SleB; KEGG: nha:Nham_3504 cell wall hydrolase, SleB; cell wall hydrolase SleB 1300409 10063417 Rpdx1_1217 Rhodopseudomonas palustris DX-1 cell wall hydrolase SleB YP_004107576.1 1298964 D 652103 CDS YP_004107577.1 316932595 10063418 complement(1300597..1301472) 1 NC_014834.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: bja:bll2540 nicotinate-mononucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 1301472 10063418 Rpdx1_1218 Rhodopseudomonas palustris DX-1 nicotinate-nucleotide pyrophosphorylase YP_004107577.1 1300597 R 652103 CDS YP_004107578.1 316932596 10063419 complement(1301488..1303104) 1 NC_014834.1 KEGG: bja:bll2541 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase 1303104 10063419 Rpdx1_1219 Rhodopseudomonas palustris DX-1 L-aspartate oxidase YP_004107578.1 1301488 R 652103 CDS YP_004107579.1 316932597 10063420 complement(1303198..1304310) 1 NC_014834.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: oca:OCAR_6942 quinolinate synthetase; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A 1304310 10063420 Rpdx1_1220 Rhodopseudomonas palustris DX-1 quinolinate synthetase complex subunit A YP_004107579.1 1303198 R 652103 CDS YP_004107580.1 316932598 10063421 1304664..1305650 1 NC_014834.1 KEGG: nha:Nham_3502 alcohol dehydrogenase GroES-like protein; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; YhdH/YhfP family quinone oxidoreductase 1305650 10063421 Rpdx1_1221 Rhodopseudomonas palustris DX-1 YhdH/YhfP family quinone oxidoreductase YP_004107580.1 1304664 D 652103 CDS YP_004107581.1 316932599 10063422 1305765..1306337 1 NC_014834.1 KEGG: nha:Nham_3501 hypothetical protein; hypothetical protein 1306337 10063422 Rpdx1_1222 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107581.1 1305765 D 652103 CDS YP_004107582.1 316932600 10063423 complement(1306363..1307733) 1 NC_014834.1 KEGG: pmy:Pmen_3748 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1307733 10063423 Rpdx1_1223 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004107582.1 1306363 R 652103 CDS YP_004107583.1 316932601 10063424 1308089..1308838 1 NC_014834.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; Alanyl-tRNA synthetase, class IIc-like; KEGG: rso:RSc0988 hypothetical protein; threonyl/alanyl tRNA synthetase SAD 1308838 10063424 Rpdx1_1224 Rhodopseudomonas palustris DX-1 threonyl/alanyl tRNA synthetase SAD YP_004107583.1 1308089 D 652103 CDS YP_004107584.1 316932602 10063425 complement(1308855..1311542) 1 NC_014834.1 PFAM: Protein of unknown function DUF2339, transmembrane; KEGG: bja:bll2549 hypothetical protein; hypothetical protein 1311542 10063425 Rpdx1_1225 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107584.1 1308855 R 652103 CDS YP_004107585.1 316932603 10063427 complement(1311808..1314678) 1 NC_014834.1 KEGG: nhl:Nhal_4024 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; helicase domain-containing protein 1314678 10063427 Rpdx1_1227 Rhodopseudomonas palustris DX-1 helicase domain-containing protein YP_004107585.1 1311808 R 652103 CDS YP_004107586.1 316932604 10063428 complement(1314671..1315735) 1 NC_014834.1 KEGG: hsa:80324 pseudouridylate synthase 1; hypothetical protein 1315735 10063428 Rpdx1_1228 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107586.1 1314671 R 652103 CDS YP_004107587.1 316932605 10063429 complement(1315827..1316822) 1 NC_014834.1 KEGG: bja:bll2550 hypothetical protein; hypothetical protein 1316822 10063429 Rpdx1_1229 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107587.1 1315827 R 652103 CDS YP_004107588.1 316932606 10063430 complement(1316819..1317325) 1 NC_014834.1 KEGG: nha:Nham_4022 hypothetical protein; hypothetical protein 1317325 10063430 Rpdx1_1230 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107588.1 1316819 R 652103 CDS YP_004107589.1 316932607 10063431 complement(1317393..1318010) 1 NC_014834.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: nha:Nham_4021 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1318010 10063431 Rpdx1_1231 Rhodopseudomonas palustris DX-1 metal dependent phosphohydrolase YP_004107589.1 1317393 R 652103 CDS YP_004107590.1 316932608 10063432 complement(1318057..1318914) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nar:Saro_2477 LysR family transcriptional regulator; LysR family transcriptional regulator 1318914 10063432 Rpdx1_1232 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107590.1 1318057 R 652103 CDS YP_004107591.1 316932609 10063433 1319044..1320018 1 NC_014834.1 PFAM: protein of unknown function DUF897; KEGG: jan:Jann_0109 hypothetical protein; hypothetical protein 1320018 10063433 Rpdx1_1233 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107591.1 1319044 D 652103 CDS YP_004107592.1 316932610 10063434 complement(1320047..1320682) 1 NC_014834.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: bja:bll2553 3-methyladenine-DNA glycosylase; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 1320682 10063434 Rpdx1_1234 Rhodopseudomonas palustris DX-1 DNA-3-methyladenine glycosylase I YP_004107592.1 1320047 R 652103 CDS YP_004107593.1 316932611 10063435 complement(1320679..1321560) 1 NC_014834.1 KEGG: nwi:Nwi_2704 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; folate-binding protein YgfZ 1321560 10063435 Rpdx1_1235 Rhodopseudomonas palustris DX-1 folate-binding protein YgfZ YP_004107593.1 1320679 R 652103 CDS YP_004107594.1 316932612 10063436 1321708..1323042 1 NC_014834.1 TIGRFAM: dihydroorotase, multifunctional complex type; KEGG: nha:Nham_4018 dihydroorotase; PFAM: amidohydrolase; multifunctional complex dihydroorotase 1323042 10063436 Rpdx1_1236 Rhodopseudomonas palustris DX-1 multifunctional complex dihydroorotase YP_004107594.1 1321708 D 652103 CDS YP_004107595.1 316932613 10063437 1323369..1323524 1 NC_014834.1 KEGG: bra:BRADO5216 hypothetical protein; hypothetical protein 1323524 10063437 Rpdx1_1237 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107595.1 1323369 D 652103 CDS YP_004107596.1 316932614 10063438 complement(1323548..1323811) 1 NC_014834.1 KEGG: nha:Nham_4017 hypothetical protein; hypothetical protein 1323811 10063438 Rpdx1_1238 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107596.1 1323548 R 652103 CDS YP_004107597.1 316932615 10063439 complement(1323943..1324320) 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_2701 hypothetical protein; hypothetical protein 1324320 10063439 Rpdx1_1239 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107597.1 1323943 R 652103 CDS YP_004107598.1 316932616 10063440 complement(1324380..1324823) 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: bja:bll2562 GDP-mannose mannosyl hydrolase; NUDIX hydrolase 1324823 10063440 Rpdx1_1240 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004107598.1 1324380 R 652103 CDS YP_004107599.1 316932617 10063441 complement(1324820..1325317) 1 NC_014834.1 KEGG: nha:Nham_4012 hypothetical protein; hypothetical protein 1325317 10063441 Rpdx1_1241 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107599.1 1324820 R 652103 CDS YP_004107600.1 316932618 10063442 1325379..1326152 1 NC_014834.1 PFAM: protein of unknown function DUF159; KEGG: bja:blr2564 hypothetical protein; hypothetical protein 1326152 10063442 Rpdx1_1242 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107600.1 1325379 D 652103 CDS YP_004107601.1 316932619 10063443 complement(1326165..1327592) 1 NC_014834.1 PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_2386 putative D-lactate ferricytochrome c oxidoreductase; FAD linked oxidase domain-containing protein 1327592 10063443 Rpdx1_1243 Rhodopseudomonas palustris DX-1 FAD linked oxidase domain-containing protein YP_004107601.1 1326165 R 652103 CDS YP_004107602.1 316932620 10063444 complement(1327712..1328710) 1 NC_014834.1 KEGG: bja:bll2570 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; Sua5/YciO/YrdC/YwlC family protein 1328710 10063444 Rpdx1_1244 Rhodopseudomonas palustris DX-1 Sua5/YciO/YrdC/YwlC family protein YP_004107602.1 1327712 R 652103 CDS YP_004107603.1 316932621 10063445 1328939..1329838 1 NC_014834.1 KEGG: azc:AZC_3223 putative transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1329838 10063445 Rpdx1_1245 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004107603.1 1328939 D 652103 CDS YP_004107604.1 316932622 10063446 1329963..1331255 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_3224 putative 4-methylmuconolactone transporter; major facilitator superfamily protein 1331255 10063446 Rpdx1_1246 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004107604.1 1329963 D 652103 CDS YP_004107605.1 316932623 10063447 1331248..1332150 1 NC_014834.1 PFAM: amidohydrolase 2; KEGG: azc:AZC_3225 putative 2-pyrone-4,6-dicarboxylate hydrolase; amidohydrolase 2 1332150 10063447 Rpdx1_1247 Rhodopseudomonas palustris DX-1 amidohydrolase 2 YP_004107605.1 1331248 D 652103 CDS YP_004107606.1 316932624 10063449 complement(1332471..1333115) 1 NC_014834.1 KEGG: met:M446_2417 hypothetical protein; hypothetical protein 1333115 10063449 Rpdx1_1248 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107606.1 1332471 R 652103 CDS YP_004107607.1 316932625 10063450 1333467..1334801 1 NC_014834.1 PFAM: Curlin associated repeat protein; KEGG: ppw:PputW619_2955 curlin-associated protein; curlin associated repeat-containing protein 1334801 10063450 Rpdx1_1249 Rhodopseudomonas palustris DX-1 curlin associated repeat-containing protein YP_004107607.1 1333467 D 652103 CDS YP_004107608.1 316932626 10063451 1334916..1335236 1 NC_014834.1 KEGG: mes:Meso_0925 hypothetical protein; hypothetical protein 1335236 10063451 Rpdx1_1250 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107608.1 1334916 D 652103 CDS YP_004107609.1 316932627 10063452 1335233..1335715 1 NC_014834.1 KEGG: bur:Bcep18194_B2589 hypothetical protein; hypothetical protein 1335715 10063452 Rpdx1_1251 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107609.1 1335233 D 652103 CDS YP_004107610.1 316932628 10063453 1335712..1336128 1 NC_014834.1 PFAM: Curli production assembly/transport component CsgF; KEGG: mpo:Mpop_0031 hypothetical protein; curli production assembly/transport component CsgF 1336128 10063453 Rpdx1_1252 Rhodopseudomonas palustris DX-1 curli production assembly/transport component CsgF YP_004107610.1 1335712 D 652103 CDS YP_004107611.1 316932629 10063454 1336182..1337123 1 NC_014834.1 PFAM: Curli production assembly/transport component CsgG; KEGG: met:M446_2419 curli production assembly/transport component CsgG; curli production assembly/transport component CsgG 1337123 10063454 Rpdx1_1253 Rhodopseudomonas palustris DX-1 curli production assembly/transport component CsgG YP_004107611.1 1336182 D 652103 CDS YP_004107612.1 316932630 10063455 1337126..1337908 1 NC_014834.1 PFAM: Lytic transglycosylase catalytic; KEGG: met:M446_4519 lytic transglycosylase catalytic; lytic transglycosylase 1337908 10063455 Rpdx1_1254 Rhodopseudomonas palustris DX-1 lytic transglycosylase YP_004107612.1 1337126 D 652103 CDS YP_004107613.1 316932631 10063456 complement(1337925..1338239) 1 NC_014834.1 KEGG: mpo:Mpop_0037 hypothetical protein; hypothetical protein 1338239 10063456 Rpdx1_1255 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107613.1 1337925 R 652103 CDS YP_004107614.1 316932632 10063457 1338486..1338746 1 NC_014834.1 KEGG: xau:Xaut_1427 hypothetical protein; hypothetical protein 1338746 10063457 Rpdx1_1256 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107614.1 1338486 D 652103 CDS YP_004107615.1 316932633 10063458 1338946..1339620 1 NC_014834.1 KEGG: mag:amb3351 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 1339620 10063458 Rpdx1_1257 Rhodopseudomonas palustris DX-1 Crp/Fnr family transcriptional regulator YP_004107615.1 1338946 D 652103 CDS YP_004107616.1 316932634 10063459 1339722..1339910 1 NC_014834.1 KEGG: azo:azo2883 hypothetical protein; hypothetical protein 1339910 10063459 Rpdx1_1258 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107616.1 1339722 D 652103 CDS YP_004107617.1 316932635 10063460 1339990..1340361 1 NC_014834.1 KEGG: azl:AZL_025200 alkylhydroperoxidase; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 1340361 10063460 Rpdx1_1259 Rhodopseudomonas palustris DX-1 alkylhydroperoxidase YP_004107617.1 1339990 D 652103 CDS YP_004107618.1 316932636 10063461 1340497..1341576 1 NC_014834.1 KEGG: nwi:Nwi_0607 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1341576 10063461 Rpdx1_1260 Rhodopseudomonas palustris DX-1 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004107618.1 1340497 D 652103 CDS YP_004107619.1 316932637 10063462 1341637..1342851 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_2451 glutaryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1342851 10063462 Rpdx1_1261 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004107619.1 1341637 D 652103 CDS YP_004107620.1 316932638 10063463 1343038..1343970 1 NC_014834.1 KEGG: bra:BRADO2135 putative beta-lactamase; putative beta-lactamase 1343970 10063463 Rpdx1_1262 Rhodopseudomonas palustris DX-1 putative beta-lactamase YP_004107620.1 1343038 D 652103 CDS YP_004107621.1 316932639 10063464 complement(1343984..1345741) 1 NC_014834.1 KEGG: bja:bll1533 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1345741 10063464 Rpdx1_1263 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004107621.1 1343984 R 652103 CDS YP_004107622.1 316932640 10063465 1345938..1346684 1 NC_014834.1 PFAM: protein of unknown function DUF28; KEGG: bja:blr1534 hypothetical protein; hypothetical protein 1346684 10063465 Rpdx1_1264 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107622.1 1345938 D 652103 CDS YP_004107623.1 316932641 10063466 1346973..1347494 1 NC_014834.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: oca:OCAR_7302 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 1347494 10063466 Rpdx1_1265 Rhodopseudomonas palustris DX-1 crossover junction endodeoxyribonuclease RuvC YP_004107623.1 1346973 D 652103 CDS YP_004107624.1 316932642 10063468 1347661..1348278 1 NC_014834.1 KEGG: bja:blr1536 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; Holliday junction DNA helicase RuvA 1348278 10063468 Rpdx1_1267 Rhodopseudomonas palustris DX-1 Holliday junction DNA helicase RuvA YP_004107624.1 1347661 D 652103 CDS YP_004107625.1 316932643 10063469 1348275..1348700 1 NC_014834.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bbt:BBta_6907 hypothetical protein; zinc-binding CMP/dCMP deaminase protein 1348700 10063469 Rpdx1_1268 Rhodopseudomonas palustris DX-1 zinc-binding CMP/dCMP deaminase protein YP_004107625.1 1348275 D 652103 CDS YP_004107626.1 316932644 10063471 1348869..1349915 1 NC_014834.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: nha:Nham_3521 Holliday junction DNA helicase RuvB; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 1349915 10063471 Rpdx1_1270 Rhodopseudomonas palustris DX-1 Holliday junction DNA helicase RuvB YP_004107626.1 1348869 D 652103 CDS YP_004107627.1 316932645 10063472 1349912..1350160 1 NC_014834.1 KEGG: hsl:OE3653R phosphoglyceromutase; hypothetical protein 1350160 10063472 Rpdx1_1271 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107627.1 1349912 D 652103 CDS YP_004107628.1 316932646 10063473 1350167..1350613 1 NC_014834.1 KEGG: nha:Nham_3520 4-hydroxybenzoyl-CoA thioesterase; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; tol-pal system-associated acyl-CoA thioesterase 1350613 10063473 Rpdx1_1272 Rhodopseudomonas palustris DX-1 tol-pal system-associated acyl-CoA thioesterase YP_004107628.1 1350167 D 652103 CDS YP_004107629.1 316932647 10063474 1350711..1352021 1 NC_014834.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tmz:Tmz1t_3718 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1352021 10063474 Rpdx1_1273 Rhodopseudomonas palustris DX-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004107629.1 1350711 D 652103 CDS YP_004107630.1 316932648 10063475 1352132..1353382 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: bja:bll7876 putative OpgC protein; hypothetical protein 1353382 10063475 Rpdx1_1274 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107630.1 1352132 D 652103 CDS YP_004107631.1 316932649 10063476 1353440..1353907 1 NC_014834.1 PFAM: protein of unknown function DUF1348; KEGG: bja:bll7210 hypothetical protein; hypothetical protein 1353907 10063476 Rpdx1_1275 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107631.1 1353440 D 652103 CDS YP_004107632.1 316932650 10063477 1353926..1354471 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: xau:Xaut_1146 TetR family transcriptional regulator; regulatory protein TetR 1354471 10063477 Rpdx1_1276 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107632.1 1353926 D 652103 CDS YP_004107633.1 316932651 10063478 1354574..1355032 1 NC_014834.1 PFAM: YCII-related; KEGG: mno:Mnod_1364 YCII-related; hypothetical protein 1355032 10063478 Rpdx1_1277 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107633.1 1354574 D 652103 CDS YP_004107634.1 316932652 10063479 1355029..1356297 1 NC_014834.1 KEGG: bja:bll7170 hypothetical protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; putative ECF subfamily RNA polymerase sigma-24 subunit 1356297 10063479 Rpdx1_1278 Rhodopseudomonas palustris DX-1 putative ECF subfamily RNA polymerase sigma-24 subunit YP_004107634.1 1355029 D 652103 CDS YP_004107635.1 316932653 10063480 complement(1356318..1357106) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr7165 oxidoreductase; short-chain dehydrogenase/reductase SDR 1357106 10063480 Rpdx1_1279 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004107635.1 1356318 R 652103 CDS YP_004107636.1 316932654 10063481 1357362..1357538 1 NC_014834.1 KEGG: rsh:Rsph17029_3809 hypothetical protein; hypothetical protein 1357538 10063481 Rpdx1_1280 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107636.1 1357362 D 652103 CDS YP_004107637.1 316932655 10063482 complement(1357657..1357758) 1 NC_014834.1 KEGG: bra:BRADO3129 hypothetical protein; hypothetical protein 1357758 10063482 Rpdx1_1281 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107637.1 1357657 R 652103 CDS YP_004107638.1 316932656 10063483 1358083..1358499 1 NC_014834.1 PFAM: YCII-related; KEGG: nha:Nham_3518 hypothetical protein; hypothetical protein 1358499 10063483 Rpdx1_1282 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107638.1 1358083 D 652103 CDS YP_004107639.1 316932657 10063484 1358577..1359281 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: nha:Nham_3517 TetR family transcriptional regulator; regulatory protein TetR 1359281 10063484 Rpdx1_1283 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107639.1 1358577 D 652103 CDS YP_004107640.1 316932658 10063485 1359423..1359884 1 NC_014834.1 KEGG: bja:bll7160 hypothetical protein; hypothetical protein 1359884 10063485 Rpdx1_1284 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107640.1 1359423 D 652103 CDS YP_004107641.1 316932659 10063486 1360034..1360501 1 NC_014834.1 KEGG: nha:Nham_3277 alkylhydroperoxidase AhpD core; TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; alkylhydroperoxidase 1360501 10063486 Rpdx1_1285 Rhodopseudomonas palustris DX-1 alkylhydroperoxidase YP_004107641.1 1360034 D 652103 CDS YP_004107642.1 316932660 10063487 1360485..1361408 1 NC_014834.1 KEGG: sme:SM_b20030 RNA polymerase sigma factor SigJ; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1361408 10063487 Rpdx1_1286 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004107642.1 1360485 D 652103 CDS YP_004107643.1 316932661 10063488 1361683..1362393 1 NC_014834.1 KEGG: bbt:BBta_6884 TolQ protein; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ 1362393 10063488 Rpdx1_1287 Rhodopseudomonas palustris DX-1 protein TolQ YP_004107643.1 1361683 D 652103 CDS YP_004107644.1 316932662 10063489 1362428..1362898 1 NC_014834.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bra:BRADO1171 putative TolR protein; biopolymer transport protein ExbD/TolR 1362898 10063489 Rpdx1_1288 Rhodopseudomonas palustris DX-1 biopolymer transport protein ExbD/TolR YP_004107644.1 1362428 D 652103 CDS YP_004107645.1 316932663 10063490 1362949..1363947 1 NC_014834.1 KEGG: nha:Nham_3513 putative TolA; putative TolA protein 1363947 10063490 Rpdx1_1289 Rhodopseudomonas palustris DX-1 putative TolA protein YP_004107645.1 1362949 D 652103 CDS YP_004107646.1 316932664 10063491 1364020..1365354 1 NC_014834.1 KEGG: nha:Nham_3512 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; Tol-Pal system beta propeller repeat-containing protein TolB 1365354 10063491 Rpdx1_1290 Rhodopseudomonas palustris DX-1 Tol-Pal system beta propeller repeat-containing protein TolB YP_004107646.1 1364020 D 652103 CDS YP_004107647.1 316932665 10063492 1365537..1367867 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: nha:Nham_3511 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 1367867 10063492 Rpdx1_1291 Rhodopseudomonas palustris DX-1 diguanylate cyclase/phosphodiesterase YP_004107647.1 1365537 D 652103 CDS YP_004107648.1 316932666 10063493 1368063..1368812 1 NC_014834.1 KEGG: nha:Nham_3510 hypothetical protein; hypothetical protein 1368812 10063493 Rpdx1_1292 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107648.1 1368063 D 652103 CDS YP_004107649.1 316932667 10063494 1369107..1369604 1 NC_014834.1 KEGG: bja:bll7149 peptidoglycan-associated lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; peptidoglycan-associated lipoprotein 1369604 10063494 Rpdx1_1293 Rhodopseudomonas palustris DX-1 peptidoglycan-associated lipoprotein YP_004107649.1 1369107 D 652103 CDS YP_004107650.1 316932668 10063495 1369762..1370790 1 NC_014834.1 TIGRFAM: tol-pal system protein YbgF; KEGG: bja:bll7148 hypothetical protein; tol-pal system protein YbgF 1370790 10063495 Rpdx1_1294 Rhodopseudomonas palustris DX-1 tol-pal system protein YbgF YP_004107650.1 1369762 D 652103 CDS YP_004107651.1 316932669 10063496 1370844..1371869 1 NC_014834.1 KEGG: bja:bll7147 hypothetical protein; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; tRNA(Ile)-lysidine synthetase 1371869 10063496 Rpdx1_1295 Rhodopseudomonas palustris DX-1 tRNA(Ile)-lysidine synthetase YP_004107651.1 1370844 D 652103 CDS YP_004107652.1 316932670 10063497 1372105..1374021 1 NC_014834.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: nha:Nham_3506 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; ATP-dependent metalloprotease FtsH 1374021 10063497 Rpdx1_1296 Rhodopseudomonas palustris DX-1 ATP-dependent metalloprotease FtsH YP_004107652.1 1372105 D 652103 CDS YP_004107653.1 316932671 10063498 1374252..1375349 1 NC_014834.1 KEGG: tmz:Tmz1t_1487 hypothetical protein; hypothetical protein 1375349 10063498 Rpdx1_1297 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107653.1 1374252 D 652103 CDS YP_004107654.1 316932672 10063499 1375393..1376199 1 NC_014834.1 PFAM: AzlC family protein; KEGG: azc:AZC_0085 putative branched-chain amino acid transport protein; AzlC family protein 1376199 10063499 Rpdx1_1298 Rhodopseudomonas palustris DX-1 AzlC family protein YP_004107654.1 1375393 D 652103 CDS YP_004107655.1 316932673 10063500 1376196..1376513 1 NC_014834.1 PFAM: branched-chain amino acid transport; KEGG: xau:Xaut_1764 branched-chain amino acid transport; branched-chain amino acid transport 1376513 10063500 Rpdx1_1299 Rhodopseudomonas palustris DX-1 branched-chain amino acid transport YP_004107655.1 1376196 D 652103 CDS YP_004107656.1 316932674 10063501 1376698..1377372 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bbt:BBta_6871 TetR family transcriptional regulator; regulatory protein TetR 1377372 10063501 Rpdx1_1300 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107656.1 1376698 D 652103 CDS YP_004107657.1 316932675 10063502 1377496..1378989 1 NC_014834.1 PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_1662 glycolate oxidase, subunit GlcD; FAD linked oxidase domain-containing protein 1378989 10063502 Rpdx1_1301 Rhodopseudomonas palustris DX-1 FAD linked oxidase domain-containing protein YP_004107657.1 1377496 D 652103 CDS YP_004107658.1 316932676 10063503 1379159..1380400 1 NC_014834.1 PFAM: FAD linked oxidase domain protein; KEGG: bja:bll7541 glycolate oxidase subunit; FAD linked oxidase domain-containing protein 1380400 10063503 Rpdx1_1302 Rhodopseudomonas palustris DX-1 FAD linked oxidase domain-containing protein YP_004107658.1 1379159 D 652103 CDS YP_004107659.1 316932677 10063504 1380397..1381710 1 NC_014834.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: nha:Nham_3202 protein of unknown function DUF224, cysteine-rich region; hypothetical protein 1381710 10063504 Rpdx1_1303 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107659.1 1380397 D 652103 CDS YP_004107660.1 316932678 10063505 1381785..1382708 1 NC_014834.1 KEGG: pfs:PFLU5927 transcriptional regulatory protein algp (alginate regulatory protein algr3); hypothetical protein 1382708 10063505 Rpdx1_1304 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107660.1 1381785 D 652103 CDS YP_004107661.1 316932679 10063506 1383171..1384100 1 NC_014834.1 KEGG: oca:OCAR_7278 hypothetical protein; hypothetical protein 1384100 10063506 Rpdx1_1305 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107661.1 1383171 D 652103 CDS YP_004107662.1 316932680 10063507 complement(1384319..1386070) 1 NC_014834.1 KEGG: bbt:BBta_1667 putative ABC transporter (fused ATP-binding and permease components); PFAM: ABC transporter domain protein; ABC transporter related; SMART: AAA ATPase; ABC transporter domain-containing protein 1386070 10063507 Rpdx1_1306 Rhodopseudomonas palustris DX-1 ABC transporter domain-containing protein YP_004107662.1 1384319 R 652103 CDS YP_004107663.1 316932681 10063508 1386456..1386869 1 NC_014834.1 KEGG: nha:Nham_3198 hypothetical protein; hypothetical protein 1386869 10063508 Rpdx1_1307 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107663.1 1386456 D 652103 CDS YP_004107664.1 316932682 10063509 complement(1386866..1388377) 1 NC_014834.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: oca:OCAR_7274 amine oxidase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 1388377 10063509 Rpdx1_1308 Rhodopseudomonas palustris DX-1 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004107664.1 1386866 R 652103 CDS YP_004107665.1 316932683 10063510 complement(1388481..1389671) 1 NC_014834.1 KEGG: bbt:BBta_1670 hypothetical protein; hypothetical protein 1389671 10063510 Rpdx1_1309 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107665.1 1388481 R 652103 CDS YP_004107666.1 316932684 10063511 complement(1389969..1391615) 1 NC_014834.1 KEGG: bbt:BBta_1671 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; chaperonin GroEL 1391615 10063511 Rpdx1_1310 Rhodopseudomonas palustris DX-1 chaperonin GroEL YP_004107666.1 1389969 R 652103 CDS YP_004107667.1 316932685 10063512 complement(1391655..1391951) 1 NC_014834.1 PFAM: Chaperonin Cpn10; KEGG: nwi:Nwi_2573 co-chaperonin GroES; chaperonin Cpn10 1391951 10063512 Rpdx1_1311 Rhodopseudomonas palustris DX-1 chaperonin Cpn10 YP_004107667.1 1391655 R 652103 CDS YP_004107668.1 316932686 10063513 1392257..1392772 1 NC_014834.1 KEGG: bja:bll7531 hypothetical protein; hypothetical protein 1392772 10063513 Rpdx1_1312 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107668.1 1392257 D 652103 CDS YP_004107669.1 316932687 10063514 1392820..1394028 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: oca:OCAR_7269 major facilitator superfamily MFS_1; major facilitator superfamily protein 1394028 10063514 Rpdx1_1313 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004107669.1 1392820 D 652103 CDS YP_004107670.1 316932688 10063515 complement(1394058..1394789) 1 NC_014834.1 KEGG: bbt:BBta_1674 hypothetical protein; hypothetical protein 1394789 10063515 Rpdx1_1314 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107670.1 1394058 R 652103 CDS YP_004107671.1 316932689 10063516 1395142..1395927 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_3192 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 1395927 10063516 Rpdx1_1315 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004107671.1 1395142 D 652103 CDS YP_004107672.1 316932690 10063517 complement(1396029..1396889) 1 NC_014834.1 PFAM: Protein of unknown function DUF2076; KEGG: bja:blr7528 hypothetical protein; putative periplasmic ligand-binding sensor protein 1396889 10063517 Rpdx1_1316 Rhodopseudomonas palustris DX-1 putative periplasmic ligand-binding sensor protein YP_004107672.1 1396029 R 652103 CDS YP_004107673.1 316932691 10063518 complement(1396987..1397880) 1 NC_014834.1 PFAM: YdjC family protein; KEGG: nha:Nham_3190 YdjC-like protein; hypothetical protein 1397880 10063518 Rpdx1_1317 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107673.1 1396987 R 652103 CDS YP_004107674.1 316932692 10063519 complement(1397877..1398929) 1 NC_014834.1 PFAM: glycosyl transferase family 2; KEGG: bja:blr7526 glycosyl transferase; glycosyl transferase family 2 protein 1398929 10063519 Rpdx1_1318 Rhodopseudomonas palustris DX-1 glycosyl transferase family 2 protein YP_004107674.1 1397877 R 652103 CDS YP_004107675.1 316932693 10063520 complement(1399026..1400003) 1 NC_014834.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: bra:BRADO6107 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase 1400003 10063520 Rpdx1_1319 Rhodopseudomonas palustris DX-1 ATP phosphoribosyltransferase YP_004107675.1 1399026 R 652103 CDS YP_004107676.1 316932694 10063521 complement(1400000..1401148) 1 NC_014834.1 KEGG: bra:BRADO6106 ATP phosphoribosyltransferase regulatory subunit; PFAM: tRNA synthetase class II (G H P and S); Histidine--tRNA ligase 1401148 10063521 Rpdx1_1320 Rhodopseudomonas palustris DX-1 Histidine--tRNA ligase YP_004107676.1 1400000 R 652103 CDS YP_004107677.1 316932695 10063522 complement(1401274..1402047) 1 NC_014834.1 PFAM: protein of unknown function DUF558; KEGG: bja:blr7523 16S ribosomal RNA methyltransferase RsmE; hypothetical protein 1402047 10063522 Rpdx1_1321 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107677.1 1401274 R 652103 CDS YP_004107678.1 316932696 10063523 1402241..1402948 1 NC_014834.1 KEGG: bja:bll7522 hypothetical protein; hypothetical protein 1402948 10063523 Rpdx1_1322 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107678.1 1402241 D 652103 CDS YP_004107679.1 316932697 10063524 1402945..1403895 1 NC_014834.1 KEGG: bja:bll7521 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate polyprenyltransferase 1403895 10063524 Rpdx1_1323 Rhodopseudomonas palustris DX-1 4-hydroxybenzoate polyprenyltransferase YP_004107679.1 1402945 D 652103 CDS YP_004107680.1 316932698 10063525 complement(1403931..1404455) 1 NC_014834.1 KEGG: bra:BRADO6101 hypothetical protein; hypothetical protein 1404455 10063525 Rpdx1_1324 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107680.1 1403931 R 652103 CDS YP_004107681.1 316932699 10063526 1404753..1406150 1 NC_014834.1 KEGG: bja:bll7519 PmbA/TldD related protein; manually curated; PFAM: peptidase U62 modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 1406150 10063526 Rpdx1_1325 Rhodopseudomonas palustris DX-1 peptidase U62 modulator of DNA gyrase YP_004107681.1 1404753 D 652103 CDS YP_004107682.1 316932700 10063527 1406137..1406952 1 NC_014834.1 PFAM: inositol monophosphatase; KEGG: nha:Nham_3181 inositol monophosphatase; inositol monophosphatase 1406952 10063527 Rpdx1_1326 Rhodopseudomonas palustris DX-1 inositol monophosphatase YP_004107682.1 1406137 D 652103 CDS YP_004107683.1 316932701 10063528 1406990..1407238 1 NC_014834.1 KEGG: nha:Nham_3180 hypothetical protein; hypothetical protein 1407238 10063528 Rpdx1_1327 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107683.1 1406990 D 652103 CDS YP_004107684.1 316932702 10063529 1407308..1408612 1 NC_014834.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: bra:BRADO6096 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase); three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 1408612 10063529 Rpdx1_1328 Rhodopseudomonas palustris DX-1 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_004107684.1 1407308 D 652103 CDS YP_004107685.1 316932703 10063530 1408605..1409627 1 NC_014834.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: nha:Nham_3177 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 1409627 10063530 Rpdx1_1329 Rhodopseudomonas palustris DX-1 tetraacyldisaccharide 4'-kinase YP_004107685.1 1408605 D 652103 CDS YP_004107686.1 316932704 10063531 complement(1409635..1409862) 1 NC_014834.1 PFAM: Protein of unknown function DUF2093; KEGG: bra:BRADO6094 hypothetical protein; hypothetical protein 1409862 10063531 Rpdx1_1330 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107686.1 1409635 R 652103 CDS YP_004107687.1 316932705 10063532 complement(1410008..1411621) 1 NC_014834.1 TIGRFAM: exodeoxyribonuclease VII, large subunit; KEGG: nwi:Nwi_2553 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 1411621 10063532 Rpdx1_1331 Rhodopseudomonas palustris DX-1 exodeoxyribonuclease VII large subunit YP_004107687.1 1410008 R 652103 CDS YP_004107688.1 316932706 10063533 1411858..1413141 1 NC_014834.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: nha:Nham_3173 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine/glycine ligase 1413141 10063533 Rpdx1_1332 Rhodopseudomonas palustris DX-1 phosphoribosylamine/glycine ligase YP_004107688.1 1411858 D 652103 CDS YP_004107689.1 316932707 10063534 1413290..1414198 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO6083 putative hydrolase; alpha/beta hydrolase fold protein 1414198 10063534 Rpdx1_1333 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004107689.1 1413290 D 652103 CDS YP_004107690.1 316932708 10063535 complement(1414182..1414628) 1 NC_014834.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: oca:OCAR_7244 tRNA-specific adenosine deaminase; zinc-binding CMP/dCMP deaminase protein 1414628 10063535 Rpdx1_1334 Rhodopseudomonas palustris DX-1 zinc-binding CMP/dCMP deaminase protein YP_004107690.1 1414182 R 652103 CDS YP_004107691.1 316932709 10063536 1414795..1416948 1 NC_014834.1 KEGG: nha:Nham_3171 pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1416948 10063536 Rpdx1_1335 Rhodopseudomonas palustris DX-1 RNA-binding S4 domain-containing protein YP_004107691.1 1414795 D 652103 CDS YP_004107692.1 316932710 10063537 1417187..1417750 1 NC_014834.1 KEGG: bja:bll7494 hypothetical protein; TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; methyltransferase 1417750 10063537 Rpdx1_1336 Rhodopseudomonas palustris DX-1 methyltransferase YP_004107692.1 1417187 D 652103 CDS YP_004107693.1 316932711 10063538 complement(1417885..1418898) 1 NC_014834.1 KEGG: bja:blr7474 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific 1418898 10063538 Rpdx1_1337 Rhodopseudomonas palustris DX-1 protein-(glutamine-N5) methyltransferase, 50S ribosomal protein L3-specific YP_004107693.1 1417885 R 652103 CDS YP_004107694.1 316932712 10063539 complement(1418898..1419365) 1 NC_014834.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: nha:Nham_3143 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE protein 1419365 10063539 Rpdx1_1338 Rhodopseudomonas palustris DX-1 molybdopterin biosynthesis MoaE protein YP_004107694.1 1418898 R 652103 CDS YP_004107695.1 316932713 10063540 complement(1419391..1419642) 1 NC_014834.1 KEGG: bbt:BBta_1725 molybdopterin synthase subunit MoaD; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; molybdopterin converting factor subunit 1 1419642 10063540 Rpdx1_1339 Rhodopseudomonas palustris DX-1 molybdopterin converting factor subunit 1 YP_004107695.1 1419391 R 652103 CDS YP_004107696.1 316932714 10063541 complement(1419639..1420265) 1 NC_014834.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: nwi:Nwi_2525 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1420265 10063541 Rpdx1_1340 Rhodopseudomonas palustris DX-1 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_004107696.1 1419639 R 652103 CDS YP_004107697.1 316932715 10063542 complement(1420402..1422501) 1 NC_014834.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: nha:Nham_3146 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C 1422501 10063542 Rpdx1_1341 Rhodopseudomonas palustris DX-1 excinuclease ABC subunit C YP_004107697.1 1420402 R 652103 CDS YP_004107698.1 316932716 10063543 1422812..1423435 1 NC_014834.1 KEGG: bja:bll7469 putative outer-membrane immunogenic protein precursor; putative outer-membrane immunogenic protein 1423435 10063543 Rpdx1_1342 Rhodopseudomonas palustris DX-1 putative outer-membrane immunogenic protein YP_004107698.1 1422812 D 652103 CDS YP_004107699.1 316932717 10063544 complement(1423689..1423901) 1 NC_014834.1 KEGG: bra:BRADO6053 cold shock protein, DNA binding; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 1423901 10063544 Rpdx1_1343 Rhodopseudomonas palustris DX-1 cold-shock DNA-binding domain-containing protein YP_004107699.1 1423689 R 652103 CDS YP_004107700.1 316932718 10063545 complement(1424175..1425032) 1 NC_014834.1 PFAM: protein of unknown function DUF519; KEGG: nha:Nham_3149 hypothetical protein; hypothetical protein 1425032 10063545 Rpdx1_1344 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107700.1 1424175 R 652103 CDS YP_004107701.1 316932719 10063546 1425468..1425863 1 NC_014834.1 KEGG: nha:Nham_3160 response regulator receiver domain-containing protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1425863 10063546 Rpdx1_1345 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004107701.1 1425468 D 652103 CDS YP_004107702.1 316932720 10063547 complement(1425955..1426350) 1 NC_014834.1 KEGG: bja:bll7455 hypothetical protein; hypothetical protein 1426350 10063547 Rpdx1_1346 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107702.1 1425955 R 652103 CDS YP_004107703.1 316932721 10063548 complement(1426454..1426657) 1 NC_014834.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bbt:BBta_1741 putative 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 1426657 10063548 Rpdx1_1347 Rhodopseudomonas palustris DX-1 4-oxalocrotonate tautomerase YP_004107703.1 1426454 R 652103 CDS YP_004107704.1 316932722 10063549 complement(1426918..1428447) 1 NC_014834.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: nwi:Nwi_2533 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 1428447 10063549 Rpdx1_1348 Rhodopseudomonas palustris DX-1 histidyl-tRNA synthetase YP_004107704.1 1426918 R 652103 CDS YP_004107705.1 316932723 10063550 1428662..1430008 1 NC_014834.1 KEGG: bbt:BBta_1722 beta alanine--pyruvate transaminase; PFAM: aminotransferase class-III; beta-alanine--pyruvate transaminase 1430008 10063550 Rpdx1_1349 Rhodopseudomonas palustris DX-1 beta-alanine--pyruvate transaminase YP_004107705.1 1428662 D 652103 CDS YP_004107706.1 316932724 10063551 1430106..1431644 1 NC_014834.1 KEGG: bra:BRADO6063 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 1431644 10063551 Rpdx1_1350 Rhodopseudomonas palustris DX-1 diguanylate phosphodiesterase YP_004107706.1 1430106 D 652103 CDS YP_004107707.1 316932725 10063552 1431657..1432511 1 NC_014834.1 KEGG: bja:blr7478 hypothetical protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; HAD-superfamily subfamily IIA hydrolase like protein; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 1432511 10063552 Rpdx1_1351 Rhodopseudomonas palustris DX-1 HAD-superfamily hydrolase YP_004107707.1 1431657 D 652103 CDS YP_004107708.1 316932726 10063553 complement(1432543..1434627) 1 NC_014834.1 PFAM: protein of unknown function DUF1355; KEGG: bra:BRADO1961 hypothetical protein; hypothetical protein 1434627 10063553 Rpdx1_1352 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107708.1 1432543 R 652103 CDS YP_004107709.1 316932727 10063554 complement(1434756..1437581) 1 NC_014834.1 TIGRFAM: conserved hypothetical protein; KEGG: nha:Nham_3253 double-transmembrane region-like; hypothetical protein 1437581 10063554 Rpdx1_1353 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107709.1 1434756 R 652103 CDS YP_004107710.1 316932728 10063555 complement(1437578..1438510) 1 NC_014834.1 PFAM: protein of unknown function DUF58; KEGG: bbt:BBta_2270 hypothetical protein; hypothetical protein 1438510 10063555 Rpdx1_1354 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107710.1 1437578 R 652103 CDS YP_004107711.1 316932729 10063556 complement(1438510..1439514) 1 NC_014834.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: bbt:BBta_2271 putative MoxR family protein; ATPase 1439514 10063556 Rpdx1_1355 Rhodopseudomonas palustris DX-1 ATPase YP_004107711.1 1438510 R 652103 CDS YP_004107712.1 316932730 10063557 1439748..1440359 1 NC_014834.1 PFAM: protein of unknown function DUF1285; KEGG: nwi:Nwi_2625 hypothetical protein; hypothetical protein 1440359 10063557 Rpdx1_1356 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107712.1 1439748 D 652103 CDS YP_004107713.1 316932731 10063558 1440356..1441033 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: bra:BRADO1966 putative NUDIX hydrolase; NUDIX hydrolase 1441033 10063558 Rpdx1_1357 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004107713.1 1440356 D 652103 CDS YP_004107714.1 316932732 10063559 1441030..1441293 1 NC_014834.1 KEGG: bbt:BBta_2274 hypothetical protein; hypothetical protein 1441293 10063559 Rpdx1_1358 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107714.1 1441030 D 652103 CDS YP_004107715.1 316932733 10063560 1441290..1442546 1 NC_014834.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: nha:Nham_3247 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 1442546 10063560 Rpdx1_1359 Rhodopseudomonas palustris DX-1 polynucleotide adenylyltransferase YP_004107715.1 1441290 D 652103 CDS YP_004107716.1 316932734 10063561 complement(1442755..1442979) 1 NC_014834.1 PFAM: Protein of unknown function DUF2158; KEGG: bja:bsl2479 hypothetical protein; hypothetical protein 1442979 10063561 Rpdx1_1360 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107716.1 1442755 R 652103 CDS YP_004107717.1 316932735 10063562 complement(1443056..1443688) 1 NC_014834.1 PFAM: Radical SAM domain protein; KEGG: nwi:Nwi_2619 hypothetical protein; radical SAM protein 1443688 10063562 Rpdx1_1361 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004107717.1 1443056 R 652103 CDS YP_004107718.1 316932736 10063563 complement(1443699..1444154) 1 NC_014834.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: nwi:Nwi_2618 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 1444154 10063563 Rpdx1_1362 Rhodopseudomonas palustris DX-1 tRNA/rRNA methyltransferase SpoU YP_004107718.1 1443699 R 652103 CDS YP_004107719.1 316932737 10063564 1444411..1444956 1 NC_014834.1 KEGG: bja:blr2485 Rieske iron-sulfur protein; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal; Rieske [2Fe-2S] iron-sulphur domain; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1444956 10063564 Rpdx1_1363 Rhodopseudomonas palustris DX-1 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_004107719.1 1444411 D 652103 CDS YP_004107720.1 316932738 10063565 1444997..1447063 1 NC_014834.1 PFAM: cytochrome c1; Cytochrome b/b6 domain; KEGG: bbt:BBta_2301 cytochrome b/c1; cytochrome c1 1447063 10063565 Rpdx1_1364 Rhodopseudomonas palustris DX-1 cytochrome c1 YP_004107720.1 1444997 D 652103 CDS YP_004107721.1 316932739 10063566 1447213..1447887 1 NC_014834.1 KEGG: bja:blr2487 hypothetical protein; carboxymethylenebutenolidase 1447887 10063566 Rpdx1_1365 Rhodopseudomonas palustris DX-1 carboxymethylenebutenolidase YP_004107721.1 1447213 D 652103 CDS YP_004107722.1 316932740 10063567 1447978..1448202 1 NC_014834.1 manually curated; KEGG: bbt:BBta_2461 hypothetical protein; hypothetical protein 1448202 10063567 Rpdx1_1366 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107722.1 1447978 D 652103 CDS YP_004107723.1 316932741 10063568 complement(1448339..1449115) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_2462 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1449115 10063568 Rpdx1_1367 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004107723.1 1448339 R 652103 CDS YP_004107724.1 316932742 10063569 complement(1449112..1449750) 1 NC_014834.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: bja:bll2624 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like; pyridoxamine 5'-phosphate oxidase 1449750 10063569 Rpdx1_1368 Rhodopseudomonas palustris DX-1 pyridoxamine 5'-phosphate oxidase YP_004107724.1 1449112 R 652103 CDS YP_004107725.1 316932743 10063570 1449766..1450284 1 NC_014834.1 KEGG: nha:Nham_0766 hypothetical protein; hypothetical protein 1450284 10063570 Rpdx1_1369 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107725.1 1449766 D 652103 CDS YP_004107726.1 316932744 10063571 1450401..1451372 1 NC_014834.1 KEGG: bra:BRADO2148 putative heat shock protein DnaJ; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 1451372 10063571 Rpdx1_1370 Rhodopseudomonas palustris DX-1 heat shock protein DnaJ domain-containing protein YP_004107726.1 1450401 D 652103 CDS YP_004107727.1 316932745 10063572 1451582..1452403 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2151 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 1452403 10063572 Rpdx1_1371 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004107727.1 1451582 D 652103 CDS YP_004107728.1 316932746 10063573 1452501..1453094 1 NC_014834.1 PFAM: Phosphoglycerate mutase; KEGG: bja:blr2630 phosphoglycerate mutase; phosphoglycerate mutase 1453094 10063573 Rpdx1_1372 Rhodopseudomonas palustris DX-1 phosphoglycerate mutase YP_004107728.1 1452501 D 652103 CDS YP_004107729.1 316932747 10063574 1453243..1454331 1 NC_014834.1 TIGRFAM: chorismate synthase; KEGG: bja:blr2631 chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1454331 10063574 Rpdx1_1373 Rhodopseudomonas palustris DX-1 chorismate synthase YP_004107729.1 1453243 D 652103 CDS YP_004107730.1 316932748 10063575 1454442..1455641 1 NC_014834.1 KEGG: bja:blr2632 putative adenylate cyclase protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase 1455641 10063575 Rpdx1_1374 Rhodopseudomonas palustris DX-1 adenylate/guanylate cyclase YP_004107730.1 1454442 D 652103 CDS YP_004107731.1 316932749 10063576 complement(1455900..1456205) 1 NC_014834.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: bja:bll2636 ATP-dependent Clp protease adaptor; ATP-dependent Clp protease adaptor protein ClpS 1456205 10063576 Rpdx1_1375 Rhodopseudomonas palustris DX-1 ATP-dependent Clp protease adaptor protein ClpS YP_004107731.1 1455900 R 652103 CDS YP_004107732.1 316932750 10063577 1456409..1457251 1 NC_014834.1 PFAM: protein of unknown function DUF1194; KEGG: bja:blr2641 hypothetical protein; hypothetical protein 1457251 10063577 Rpdx1_1376 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107732.1 1456409 D 652103 CDS YP_004107733.1 316932751 10063578 complement(1457488..1458891) 1 NC_014834.1 PFAM: Carotenoid oxygenase; KEGG: bja:blr5790 putative lignostilbene-alpha,beta-dioxygenase; carotenoid oxygenase 1458891 10063578 Rpdx1_1377 Rhodopseudomonas palustris DX-1 carotenoid oxygenase YP_004107733.1 1457488 R 652103 CDS YP_004107734.1 316932752 10063579 complement(1458929..1460308) 1 NC_014834.1 KEGG: hha:Hhal_0248 hypothetical protein; hypothetical protein 1460308 10063579 Rpdx1_1378 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107734.1 1458929 R 652103 CDS YP_004107735.1 316932753 10063580 complement(1460301..1461410) 1 NC_014834.1 KEGG: hha:Hhal_0249 hypothetical protein; hypothetical protein 1461410 10063580 Rpdx1_1379 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107735.1 1460301 R 652103 CDS YP_004107736.1 316932754 10063581 complement(1461429..1462469) 1 NC_014834.1 KEGG: hha:Hhal_0250 hypothetical protein; hypothetical protein 1462469 10063581 Rpdx1_1380 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107736.1 1461429 R 652103 CDS YP_004107737.1 316932755 10063582 complement(1462642..1463637) 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO1608 putative alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1463637 10063582 Rpdx1_1381 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004107737.1 1462642 R 652103 CDS YP_004107738.1 316932756 10063583 complement(1463861..1465363) 1 NC_014834.1 PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: bja:blr5601 hypothetical protein; microcystin LR degradation protein MlrC-like protein 1465363 10063583 Rpdx1_1382 Rhodopseudomonas palustris DX-1 microcystin LR degradation protein MlrC-like protein YP_004107738.1 1463861 R 652103 CDS YP_004107739.1 316932757 10063584 complement(1465492..1467144) 1 NC_014834.1 KEGG: bbt:BBta_5258 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter-like protein 1467144 10063584 Rpdx1_1383 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107739.1 1465492 R 652103 CDS YP_004107740.1 316932758 10063585 complement(1467212..1468102) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2920 putative ABC transporter (permease protein); putative membrane protein; binding-protein-dependent transporter inner membrane component 1468102 10063585 Rpdx1_1384 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004107740.1 1467212 R 652103 CDS YP_004107741.1 316932759 10063586 complement(1468114..1469055) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_5256 putative ABC transporter (permease protein); binding-protein-dependent transporter inner membrane component 1469055 10063586 Rpdx1_1385 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004107741.1 1468114 R 652103 CDS YP_004107742.1 316932760 10063587 complement(1469216..1470346) 1 NC_014834.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bbt:BBta_5255 carboxypeptidase; peptidase M20 1470346 10063587 Rpdx1_1386 Rhodopseudomonas palustris DX-1 peptidase M20 YP_004107742.1 1469216 R 652103 CDS YP_004107743.1 316932761 10063588 1470599..1472209 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_5254 putative ABC transporter (substrate-binding protein); family 5 extracellular solute-binding protein 1472209 10063588 Rpdx1_1387 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004107743.1 1470599 D 652103 CDS YP_004107744.1 316932762 10063589 complement(1472410..1473036) 1 NC_014834.1 KEGG: dwi:Dwil_GK22681 GK22681 gene product from transcript GK22681-RA; hypothetical protein 1473036 10063589 Rpdx1_1388 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107744.1 1472410 R 652103 CDS YP_004107745.1 316932763 10063590 1473516..1474532 1 NC_014834.1 KEGG: bbt:BBta_3002 signal-transduction protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; putative signal transduction protein 1474532 10063590 Rpdx1_1389 Rhodopseudomonas palustris DX-1 putative signal transduction protein YP_004107745.1 1473516 D 652103 CDS YP_004107746.1 316932764 10063591 complement(1474555..1475346) 1 NC_014834.1 KEGG: bln:Blon_1962 sulfatase; hypothetical protein 1475346 10063591 Rpdx1_1390 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107746.1 1474555 R 652103 CDS YP_004107747.1 316932765 10063592 complement(1475375..1476307) 1 NC_014834.1 PFAM: CHAD domain containing protein; KEGG: mch:Mchl_3398 CHAD domain containing protein; CHAD domain-containing protein 1476307 10063592 Rpdx1_1391 Rhodopseudomonas palustris DX-1 CHAD domain-containing protein YP_004107747.1 1475375 R 652103 CDS YP_004107748.1 316932766 10063593 complement(1476427..1476750) 1 NC_014834.1 KEGG: psb:Psyr_0088 PAS:GGDEF; hypothetical protein 1476750 10063593 Rpdx1_1392 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107748.1 1476427 R 652103 CDS YP_004107749.1 316932767 10063594 1477021..1478589 1 NC_014834.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: chy:CHY_0121 indolepyruvate ferredoxin oxidoreductase, IorA subunit; thiamine pyrophosphate domain-containing TPP-binding protein 1478589 10063594 Rpdx1_1393 Rhodopseudomonas palustris DX-1 thiamine pyrophosphate domain-containing TPP-binding protein YP_004107749.1 1477021 D 652103 CDS YP_004107750.1 316932768 10063595 complement(1478702..1484839) 1 NC_014834.1 KEGG: bra:BRADO5083 putative methyl-accepting chemotaxis protein; putative methyl-accepting chemotaxis protein 1484839 10063595 Rpdx1_1394 Rhodopseudomonas palustris DX-1 putative methyl-accepting chemotaxis protein YP_004107750.1 1478702 R 652103 CDS YP_004107751.1 316932769 10063596 1485251..1485640 1 NC_014834.1 PFAM: Hpt domain protein; KEGG: bja:bll5886 two-component hybrid sensor and regulator; Hpt domain-containing protein 1485640 10063596 Rpdx1_1395 Rhodopseudomonas palustris DX-1 Hpt domain-containing protein YP_004107751.1 1485251 D 652103 CDS YP_004107752.1 316932770 10063597 1485737..1486057 1 NC_014834.1 PFAM: ferredoxin; KEGG: bja:bll5885 ferrodoxin; ferredoxin 1486057 10063597 Rpdx1_1396 Rhodopseudomonas palustris DX-1 ferredoxin YP_004107752.1 1485737 D 652103 CDS YP_004107753.1 316932771 10063598 complement(1486188..1486643) 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bja:blr5884 hypothetical protein; thioesterase superfamily protein 1486643 10063598 Rpdx1_1397 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004107753.1 1486188 R 652103 CDS YP_004107754.1 316932772 10063599 1486804..1487832 1 NC_014834.1 KEGG: nha:Nham_1321 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NADP(+) reductase 1487832 10063599 Rpdx1_1398 Rhodopseudomonas palustris DX-1 ferredoxin--NADP(+) reductase YP_004107754.1 1486804 D 652103 CDS YP_004107755.1 316932773 10063600 1488011..1489294 1 NC_014834.1 PFAM: Cl- channel voltage-gated family protein; KEGG: bra:BRADO3095 putative H(+)/Cl(-) exchange transporter; Cl- channel voltage-gated family protein 1489294 10063600 Rpdx1_1399 Rhodopseudomonas palustris DX-1 Cl- channel voltage-gated family protein YP_004107755.1 1488011 D 652103 CDS YP_004107756.1 316932774 10063601 complement(1489323..1490363) 1 NC_014834.1 PFAM: glycosyl transferase family 2; KEGG: ppd:Ppro_3227 glycosyl transferase family protein; glycosyl transferase family 2 protein 1490363 10063601 Rpdx1_1400 Rhodopseudomonas palustris DX-1 glycosyl transferase family 2 protein YP_004107756.1 1489323 R 652103 CDS YP_004107757.1 316932775 10063602 1490530..1491855 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: bte:BTH_I1330 glycosyltransferase WbpX, putative; glycosyl transferase group 1 protein 1491855 10063602 Rpdx1_1401 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004107757.1 1490530 D 652103 CDS YP_004107758.1 316932776 10063603 1491863..1493134 1 NC_014834.1 KEGG: aeh:Mlg_2800 O-antigen polymerase; hypothetical protein 1493134 10063603 Rpdx1_1402 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107758.1 1491863 D 652103 CDS YP_004107759.1 316932777 10063604 1493224..1493898 1 NC_014834.1 PFAM: Protein of unknown function DUF2147; KEGG: bja:bll5882 hypothetical protein; hypothetical protein 1493898 10063604 Rpdx1_1403 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107759.1 1493224 D 652103 CDS YP_004107760.1 316932778 10063605 complement(1494065..1496104) 1 NC_014834.1 KEGG: bbt:BBta_5548 hypothetical protein; hypothetical protein 1496104 10063605 Rpdx1_1404 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107760.1 1494065 R 652103 CDS YP_004107761.1 316932779 10063606 complement(1496199..1497272) 1 NC_014834.1 KEGG: nha:Nham_1324 hypothetical protein; hypothetical protein 1497272 10063606 Rpdx1_1405 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107761.1 1496199 R 652103 CDS YP_004107762.1 316932780 10063607 complement(1497257..1497349) 1 NC_014834.1 hypothetical protein 1497349 10063607 Rpdx1_1406 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107762.1 1497257 R 652103 CDS YP_004107763.1 316932781 10063608 1497667..1498173 1 NC_014834.1 PFAM: protein of unknown function DUF892; KEGG: bja:bll5866 hypothetical protein; hypothetical protein 1498173 10063608 Rpdx1_1407 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107763.1 1497667 D 652103 CDS YP_004107764.1 316932782 10063609 complement(1498271..1498711) 1 NC_014834.1 KEGG: nha:Nham_1325 hypothetical protein; hypothetical protein 1498711 10063609 Rpdx1_1408 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107764.1 1498271 R 652103 CDS YP_004107765.1 316932783 10063610 1498830..1499459 1 NC_014834.1 KEGG: nha:Nham_1326 hypothetical protein; hypothetical protein 1499459 10063610 Rpdx1_1409 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107765.1 1498830 D 652103 CDS YP_004107766.1 316932784 10063611 complement(1499485..1499916) 1 NC_014834.1 PFAM: UspA domain protein; KEGG: bra:BRADO5069 putative universal stress protein (Usp); UspA domain-containing protein 1499916 10063611 Rpdx1_1410 Rhodopseudomonas palustris DX-1 UspA domain-containing protein YP_004107766.1 1499485 R 652103 CDS YP_004107767.1 316932785 10063612 complement(1499962..1500492) 1 NC_014834.1 PFAM: Phosphoglycerate mutase; KEGG: nha:Nham_1328 putative phosphohistidine phosphatase, SixA; putative phosphohistidine phosphatase SixA 1500492 10063612 Rpdx1_1411 Rhodopseudomonas palustris DX-1 putative phosphohistidine phosphatase SixA YP_004107767.1 1499962 R 652103 CDS YP_004107768.1 316932786 10063613 1500635..1502095 1 NC_014834.1 PFAM: FAD dependent oxidoreductase; KEGG: bja:bll5856 hypothetical protein; FAD dependent oxidoreductase 1502095 10063613 Rpdx1_1412 Rhodopseudomonas palustris DX-1 FAD dependent oxidoreductase YP_004107768.1 1500635 D 652103 CDS YP_004107769.1 316932787 10063614 1502249..1502746 1 NC_014834.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: nha:Nham_1330 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 1502746 10063614 Rpdx1_1413 Rhodopseudomonas palustris DX-1 methionine-R-sulfoxide reductase YP_004107769.1 1502249 D 652103 CDS YP_004107770.1 316932788 10063615 1502904..1504397 1 NC_014834.1 KEGG: cbd:CBUD_1484 undecaprenyl-phosphomannose:protein mannosyltransferase; hypothetical protein 1504397 10063615 Rpdx1_1414 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107770.1 1502904 D 652103 CDS YP_004107771.1 316932789 10063616 complement(1504447..1504719) 1 NC_014834.1 KEGG: bbt:BBta_2392 hypothetical protein; hypothetical protein 1504719 10063616 Rpdx1_1415 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107771.1 1504447 R 652103 CDS YP_004107772.1 316932790 10063618 1509419..1511269 1 NC_014834.1 KEGG: oca:OCAR_5369 flagellar basal body FlaE domain protein; TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar hook-basal body protein 1511269 10063618 Rpdx1_1417 Rhodopseudomonas palustris DX-1 flagellar hook-basal body protein YP_004107772.1 1509419 D 652103 CDS YP_004107773.1 316932791 10063619 1511310..1513181 1 NC_014834.1 KEGG: oca:OCAR_5370 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK 1513181 10063619 Rpdx1_1418 Rhodopseudomonas palustris DX-1 flagellar hook-associated protein FlgK YP_004107773.1 1511310 D 652103 CDS YP_004107774.1 316932792 10063620 1513190..1514797 1 NC_014834.1 KEGG: oca:OCAR_5371 hypothetical protein; hypothetical protein 1514797 10063620 Rpdx1_1419 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107774.1 1513190 D 652103 CDS YP_004107775.1 316932793 10063621 1515105..1517783 1 NC_014834.1 PFAM: protein of unknown function DUF1522; KEGG: bja:bll5846 flagellin; hypothetical protein 1517783 10063621 Rpdx1_1420 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107775.1 1515105 D 652103 CDS YP_004107776.1 316932794 10063622 1517935..1518867 1 NC_014834.1 TIGRFAM: methyltransferase FkbM family; KEGG: cyn:Cyan7425_2162 methyltransferase FkbM family; FkbM family methyltransferase 1518867 10063622 Rpdx1_1421 Rhodopseudomonas palustris DX-1 FkbM family methyltransferase YP_004107776.1 1517935 D 652103 CDS YP_004107777.1 316932795 10063623 1518991..1519659 1 NC_014834.1 PFAM: sugar isomerase (SIS); KEGG: rlt:Rleg2_5603 sugar isomerase (SIS); sugar isomerase 1519659 10063623 Rpdx1_1422 Rhodopseudomonas palustris DX-1 sugar isomerase YP_004107777.1 1518991 D 652103 CDS YP_004107778.1 316932796 10063624 1519801..1520739 1 NC_014834.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bbt:BBta_5633 putative sugar-nucleotide epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1520739 10063624 Rpdx1_1423 Rhodopseudomonas palustris DX-1 NAD-dependent epimerase/dehydratase YP_004107778.1 1519801 D 652103 CDS YP_004107779.1 316932797 10063625 1520736..1521773 1 NC_014834.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bbt:BBta_5635 putative dTDP-glucose 4,6-dehydratase; NAD-dependent epimerase/dehydratase 1521773 10063625 Rpdx1_1424 Rhodopseudomonas palustris DX-1 NAD-dependent epimerase/dehydratase YP_004107779.1 1520736 D 652103 CDS YP_004107780.1 316932798 10063626 1521782..1522441 1 NC_014834.1 PFAM: Methyltransferase type 11; KEGG: cbd:CBUD_0696 methyltransferase; type 11 methyltransferase 1522441 10063626 Rpdx1_1425 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004107780.1 1521782 D 652103 CDS YP_004107781.1 316932799 10063627 1522438..1523412 1 NC_014834.1 KEGG: cbu:CBU_0693 putative pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase 1523412 10063627 Rpdx1_1426 Rhodopseudomonas palustris DX-1 pyruvate dehydrogenase YP_004107781.1 1522438 D 652103 CDS YP_004107782.1 316932800 10063628 1523423..1524475 1 NC_014834.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: cbd:CBUD_0706 pyruvate dehydrogenase E1 component beta subunit; transketolase central region 1524475 10063628 Rpdx1_1427 Rhodopseudomonas palustris DX-1 transketolase central region YP_004107782.1 1523423 D 652103 CDS YP_004107783.1 316932801 10063629 1524483..1524629 1 NC_014834.1 hypothetical protein 1524629 10063629 Rpdx1_1428 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107783.1 1524483 D 652103 CDS YP_004107784.1 316932802 10063630 1524620..1525675 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_5638 putative alcohol dehydrogenase (zinc-binding); alcohol dehydrogenase zinc-binding domain-containing protein 1525675 10063630 Rpdx1_1429 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004107784.1 1524620 D 652103 CDS YP_004107785.1 316932803 10063631 1525681..1527165 1 NC_014834.1 KEGG: bra:BRADO5164 putative bifunctional enzyme (sugar kinase/cytidylyltransferase); TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; PfkB domain protein; cytidyltransferase-like domain-containing protein 1527165 10063631 Rpdx1_1430 Rhodopseudomonas palustris DX-1 cytidyltransferase-like domain-containing protein YP_004107785.1 1525681 D 652103 CDS YP_004107786.1 316932804 10063632 1527162..1528091 1 NC_014834.1 PFAM: Nucleotidyl transferase; KEGG: bbt:BBta_5632 putative sugar-phosphate nucleotidyl transferase; nucleotidyl transferase 1528091 10063632 Rpdx1_1431 Rhodopseudomonas palustris DX-1 nucleotidyl transferase YP_004107786.1 1527162 D 652103 CDS YP_004107787.1 316932805 10063633 1528088..1528894 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lhk:LHK_02873 probable oxidoreductase; short-chain dehydrogenase/reductase SDR 1528894 10063633 Rpdx1_1432 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004107787.1 1528088 D 652103 CDS YP_004107788.1 316932806 10063634 1528918..1530720 1 NC_014834.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sus:Acid_2243 thiamine pyrophosphate binding domain-containing protein; thiamine pyrophosphate domain-containing TPP-binding protein 1530720 10063634 Rpdx1_1433 Rhodopseudomonas palustris DX-1 thiamine pyrophosphate domain-containing TPP-binding protein YP_004107788.1 1528918 D 652103 CDS YP_004107789.1 316932807 10063635 complement(1530733..1532880) 1 NC_014834.1 KEGG: bra:BRADO1360 O-linked N-acetylglucosamine transferase; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; hypothetical protein 1532880 10063635 Rpdx1_1434 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107789.1 1530733 R 652103 CDS YP_004107790.1 316932808 10063636 1533403..1536066 1 NC_014834.1 PFAM: protein of unknown function DUF1522; KEGG: bja:bll5846 flagellin; hypothetical protein 1536066 10063636 Rpdx1_1435 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107790.1 1533403 D 652103 CDS YP_004107791.1 316932809 10063637 1536282..1536662 1 NC_014834.1 PFAM: flagellar FlbT family protein; KEGG: bra:BRADO7004 flagellar biosynthesis repressor FlbT; flagellar FlbT family protein 1536662 10063637 Rpdx1_1436 Rhodopseudomonas palustris DX-1 flagellar FlbT family protein YP_004107791.1 1536282 D 652103 CDS YP_004107792.1 316932810 10063638 1536666..1537034 1 NC_014834.1 PFAM: flagellar FlaF family protein; KEGG: oca:OCAR_5375 flagellar biosynthesis regulatory protein FlaF; flagellar FlaF family protein 1537034 10063638 Rpdx1_1437 Rhodopseudomonas palustris DX-1 flagellar FlaF family protein YP_004107792.1 1536666 D 652103 CDS YP_004107793.1 316932811 10063639 complement(1537141..1537512) 1 NC_014834.1 KEGG: nha:Nham_1340 hypothetical protein; hypothetical protein 1537512 10063639 Rpdx1_1438 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107793.1 1537141 R 652103 CDS YP_004107794.1 316932812 10063640 complement(1537694..1538185) 1 NC_014834.1 KEGG: nwi:Nwi_1109 hypothetical protein; hypothetical protein 1538185 10063640 Rpdx1_1439 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107794.1 1537694 R 652103 CDS YP_004107795.1 316932813 10063641 complement(1538205..1538540) 1 NC_014834.1 PFAM: Flagellar protein FlgJ-like; KEGG: nwi:Nwi_1110 chemotactic signal-response protein CheL; flagellar protein FlgJ-like protein 1538540 10063641 Rpdx1_1440 Rhodopseudomonas palustris DX-1 flagellar protein FlgJ-like protein YP_004107795.1 1538205 R 652103 CDS YP_004107796.1 316932814 10063642 complement(1538540..1539661) 1 NC_014834.1 PFAM: flagellar P-ring protein; KEGG: bbt:BBta_5520 flagellar basal body P-ring protein; flagellar P-ring protein 1539661 10063642 Rpdx1_1441 Rhodopseudomonas palustris DX-1 flagellar P-ring protein YP_004107796.1 1538540 R 652103 CDS YP_004107797.1 316932815 10063643 1539959..1540369 1 NC_014834.1 PFAM: Flagellar assembly regulator FliX, class II; KEGG: bja:bll5837 flagellar assembly regulator FliX; flagellar assembly regulator FliX, class II 1540369 10063643 Rpdx1_1442 Rhodopseudomonas palustris DX-1 flagellar assembly regulator FliX, class II YP_004107797.1 1539959 D 652103 CDS YP_004107798.1 316932816 10063644 1540508..1540918 1 NC_014834.1 manually curated; TIGRFAM: RNA polymerase-binding protein DksA; KEGG: nha:Nham_1346 TraR/DksA family transcriptional regulator; PFAM: zinc finger DksA/TraR C4-type; TraR/DksA family transcriptional regulator 1540918 10063644 Rpdx1_1443 Rhodopseudomonas palustris DX-1 TraR/DksA family transcriptional regulator YP_004107798.1 1540508 D 652103 CDS YP_004107799.1 316932817 10063645 complement(1541031..1541318) 1 NC_014834.1 KEGG: nha:Nham_0415 hypothetical protein; hypothetical protein 1541318 10063645 Rpdx1_1444 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107799.1 1541031 R 652103 CDS YP_004107800.1 316932818 10063646 complement(1541513..1542076) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: atc:AGR_C_4219 hypothetical protein; regulatory protein TetR 1542076 10063646 Rpdx1_1445 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107800.1 1541513 R 652103 CDS YP_004107801.1 316932819 10063647 1542225..1543418 1 NC_014834.1 KEGG: rhi:NGR_c35220 putative efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1543418 10063647 Rpdx1_1446 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004107801.1 1542225 D 652103 CDS YP_004107802.1 316932820 10063648 1543431..1546583 1 NC_014834.1 KEGG: atc:AGR_L_3217 RND multidrug efflux transporter MexD; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1546583 10063648 Rpdx1_1447 Rhodopseudomonas palustris DX-1 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004107802.1 1543431 D 652103 CDS YP_004107803.1 316932821 10063649 complement(1546777..1547535) 1 NC_014834.1 PFAM: flagellar L-ring protein; KEGG: nha:Nham_1381 flagellar basal body L-ring protein; flagellar L-ring protein 1547535 10063649 Rpdx1_1448 Rhodopseudomonas palustris DX-1 flagellar L-ring protein YP_004107803.1 1546777 R 652103 CDS YP_004107804.1 316932822 10063650 complement(1547541..1548572) 1 NC_014834.1 KEGG: nha:Nham_1382 flagellar basal body P-ring biosynthesis protein FlgA; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; flagella basal body P-ring formation protein FlgA 1548572 10063650 Rpdx1_1449 Rhodopseudomonas palustris DX-1 flagella basal body P-ring formation protein FlgA YP_004107804.1 1547541 R 652103 CDS YP_004107805.1 316932823 10063651 complement(1548585..1549373) 1 NC_014834.1 KEGG: nha:Nham_1383 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgG 1549373 10063651 Rpdx1_1450 Rhodopseudomonas palustris DX-1 flagellar basal-body rod protein FlgG YP_004107805.1 1548585 R 652103 CDS YP_004107806.1 316932824 10063652 complement(1549386..1550147) 1 NC_014834.1 KEGG: nha:Nham_1384 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgF 1550147 10063652 Rpdx1_1451 Rhodopseudomonas palustris DX-1 flagellar basal-body rod protein FlgF YP_004107806.1 1549386 R 652103 CDS YP_004107807.1 316932825 10063653 1550513..1551013 1 NC_014834.1 PFAM: flagellar basal body-associated protein FliL; KEGG: bbt:BBta_5508 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 1551013 10063653 Rpdx1_1452 Rhodopseudomonas palustris DX-1 flagellar basal body-associated protein FliL YP_004107807.1 1550513 D 652103 CDS YP_004107808.1 316932826 10063654 1551021..1552223 1 NC_014834.1 KEGG: nwi:Nwi_1124 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM 1552223 10063654 Rpdx1_1453 Rhodopseudomonas palustris DX-1 flagellar motor switch protein FliM YP_004107808.1 1551021 D 652103 CDS YP_004107809.1 316932827 10063655 1552220..1552645 1 NC_014834.1 KEGG: bja:bll5824 hypothetical protein; hypothetical protein 1552645 10063655 Rpdx1_1454 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107809.1 1552220 D 652103 CDS YP_004107810.1 316932828 10063656 1552642..1553403 1 NC_014834.1 KEGG: nha:Nham_1388 hypothetical protein; hypothetical protein 1553403 10063656 Rpdx1_1455 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107810.1 1552642 D 652103 CDS YP_004107811.1 316932829 10063657 complement(1553417..1553746) 1 NC_014834.1 KEGG: bja:blr5534 hypothetical protein; hypothetical protein 1553746 10063657 Rpdx1_1456 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107811.1 1553417 R 652103 CDS YP_004107812.1 316932830 10063658 1554204..1558004 1 NC_014834.1 KEGG: nha:Nham_1389 tetratricopeptide TPR_4 protein; tetratricopeptide-repeat containing protein 1558004 10063658 Rpdx1_1457 Rhodopseudomonas palustris DX-1 tetratricopeptide-repeat containing protein YP_004107812.1 1554204 D 652103 CDS YP_004107813.1 316932831 10063659 complement(1558162..1558929) 1 NC_014834.1 manually curated; TIGRFAM: flagellar biosynthetic protein FliP; KEGG: nha:Nham_1390 flagellar biosynthesis protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 1558929 10063659 Rpdx1_1458 Rhodopseudomonas palustris DX-1 flagellar biosynthetic protein FliP YP_004107813.1 1558162 R 652103 CDS YP_004107814.1 316932832 10063660 complement(1558904..1560058) 1 NC_014834.1 KEGG: bbt:BBta_5498 hypothetical protein; hypothetical protein 1560058 10063660 Rpdx1_1459 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107814.1 1558904 R 652103 CDS YP_004107815.1 316932833 10063661 1560382..1560792 1 NC_014834.1 PFAM: flagellar basal body rod protein; KEGG: bra:BRADO5029 flagellar basal body rod protein FlgB; flagellar basal body rod protein 1560792 10063661 Rpdx1_1460 Rhodopseudomonas palustris DX-1 flagellar basal body rod protein YP_004107815.1 1560382 D 652103 CDS YP_004107816.1 316932834 10063662 1560816..1561241 1 NC_014834.1 KEGG: bja:bll5813 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgC 1561241 10063662 Rpdx1_1461 Rhodopseudomonas palustris DX-1 flagellar basal-body rod protein FlgC YP_004107816.1 1560816 D 652103 CDS YP_004107817.1 316932835 10063663 1561276..1561584 1 NC_014834.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: bja:bll5812 flagellar hook-basal body protein FliE; flagellar hook-basal body complex protein FliE 1561584 10063663 Rpdx1_1462 Rhodopseudomonas palustris DX-1 flagellar hook-basal body complex protein FliE YP_004107817.1 1561276 D 652103 CDS YP_004107818.1 316932836 10063664 1561747..1562010 1 NC_014834.1 PFAM: export protein FliQ family 3; KEGG: nwi:Nwi_1135 flagellar biosynthesis protein FliQ; export protein FliQ family 3 1562010 10063664 Rpdx1_1463 Rhodopseudomonas palustris DX-1 export protein FliQ family 3 YP_004107818.1 1561747 D 652103 CDS YP_004107819.1 316932837 10063665 1562081..1562887 1 NC_014834.1 KEGG: bja:bll5810 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 1562887 10063665 Rpdx1_1464 Rhodopseudomonas palustris DX-1 flagellar biosynthetic protein FliR YP_004107819.1 1562081 D 652103 CDS YP_004107820.1 316932838 10063666 1562914..1563987 1 NC_014834.1 KEGG: bra:BRADO5024 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; flagellar biosynthetic protein FlhB 1563987 10063666 Rpdx1_1465 Rhodopseudomonas palustris DX-1 flagellar biosynthetic protein FlhB YP_004107820.1 1562914 D 652103 CDS YP_004107821.1 316932839 10063667 1564097..1566742 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; KEGG: nha:Nham_1398 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; multi-sensor hybrid histidine kinase 1566742 10063667 Rpdx1_1466 Rhodopseudomonas palustris DX-1 multi-sensor hybrid histidine kinase YP_004107821.1 1564097 D 652103 CDS YP_004107822.1 316932840 10063668 1566815..1567609 1 NC_014834.1 PFAM: FRG domain protein; KEGG: pla:Plav_0332 FRG domain-containing protein; FRG domain-containing protein 1567609 10063668 Rpdx1_1467 Rhodopseudomonas palustris DX-1 FRG domain-containing protein YP_004107822.1 1566815 D 652103 CDS YP_004107823.1 316932841 10063669 1567606..1567977 1 NC_014834.1 KEGG: mpo:Mpop_2510 hypothetical protein; hypothetical protein 1567977 10063669 Rpdx1_1468 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107823.1 1567606 D 652103 CDS YP_004107824.1 316932842 10063670 1568118..1569194 1 NC_014834.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: bja:bll5807 hypothetical protein; import inner membrane translocase subunit Tim44 1569194 10063670 Rpdx1_1469 Rhodopseudomonas palustris DX-1 import inner membrane translocase subunit Tim44 YP_004107824.1 1568118 D 652103 CDS YP_004107825.1 316932843 10063671 1569319..1570029 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bja:bll5800 hypothetical protein; glutathione S-transferase domain-containing protein 1570029 10063671 Rpdx1_1470 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004107825.1 1569319 D 652103 CDS YP_004107826.1 316932844 10063672 complement(1570186..1570545) 1 NC_014834.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: nha:Nham_2565 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 1570545 10063672 Rpdx1_1471 Rhodopseudomonas palustris DX-1 glutathione-dependent formaldehyde-activating protein YP_004107826.1 1570186 R 652103 CDS YP_004107827.1 316932845 10063673 complement(1570686..1570856) 1 NC_014834.1 KEGG: dmo:Dmoj_GI10546 GI10546 gene product from transcript GI10546-RA; hypothetical protein 1570856 10063673 Rpdx1_1472 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107827.1 1570686 R 652103 CDS YP_004107828.1 316932846 10063674 complement(1571052..1571549) 1 NC_014834.1 KEGG: nha:Nham_2563 hypothetical protein; hypothetical protein 1571549 10063674 Rpdx1_1473 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107828.1 1571052 R 652103 CDS YP_004107829.1 316932847 10063675 1571672..1571905 1 NC_014834.1 manually curated; KEGG: xau:Xaut_3830 hypothetical protein; hypothetical protein 1571905 10063675 Rpdx1_1474 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107829.1 1571672 D 652103 CDS YP_004107830.1 316932848 10063676 1571902..1572186 1 NC_014834.1 PFAM: plasmid stabilization system; KEGG: sme:SMa0473 hypothetical protein; plasmid stabilization system 1572186 10063676 Rpdx1_1475 Rhodopseudomonas palustris DX-1 plasmid stabilization system YP_004107830.1 1571902 D 652103 CDS YP_004107831.1 316932849 10063677 1572291..1573961 1 NC_014834.1 KEGG: bja:bll5796 fumarate hydratase class I; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 1573961 10063677 Rpdx1_1476 Rhodopseudomonas palustris DX-1 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_004107831.1 1572291 D 652103 CDS YP_004107832.1 316932850 10063679 1574426..1575097 1 NC_014834.1 KEGG: cpc:Cpar_0295 hypothetical protein; hypothetical protein 1575097 10063679 Rpdx1_1478 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107832.1 1574426 D 652103 CDS YP_004107833.1 316932851 10063680 complement(1575310..1575606) 1 NC_014834.1 KEGG: bbt:BBta_5480 hypothetical protein; hypothetical protein 1575606 10063680 Rpdx1_1479 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107833.1 1575310 R 652103 CDS YP_004107834.1 316932852 10063681 1575869..1576576 1 NC_014834.1 KEGG: sus:Acid_6846 NHL repeat-containing protein; hypothetical protein 1576576 10063681 Rpdx1_1480 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107834.1 1575869 D 652103 CDS YP_004107835.1 316932853 10063682 complement(1576581..1577165) 1 NC_014834.1 KEGG: bja:blr5793 hypothetical protein; hypothetical protein 1577165 10063682 Rpdx1_1481 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107835.1 1576581 R 652103 CDS YP_004107836.1 316932854 10063683 complement(1577306..1577935) 1 NC_014834.1 KEGG: bja:blr5788 hypothetical protein; hypothetical protein 1577935 10063683 Rpdx1_1482 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107836.1 1577306 R 652103 CDS YP_004107837.1 316932855 10063684 1578093..1578842 1 NC_014834.1 KEGG: bbt:BBta_5473 histone-lysine N-methyltransferase; PFAM: nuclear protein SET; SMART: nuclear protein SET; nuclear protein SET 1578842 10063684 Rpdx1_1483 Rhodopseudomonas palustris DX-1 nuclear protein SET YP_004107837.1 1578093 D 652103 CDS YP_004107838.1 316932856 10063685 complement(1578962..1579312) 1 NC_014834.1 KEGG: bra:BRADO5003 hypothetical protein; hypothetical protein 1579312 10063685 Rpdx1_1484 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107838.1 1578962 R 652103 CDS YP_004107839.1 316932857 10063686 1579513..1580334 1 NC_014834.1 KEGG: bbt:BBta_5469 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1580334 10063686 Rpdx1_1485 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004107839.1 1579513 D 652103 CDS YP_004107840.1 316932858 10063687 1580407..1581072 1 NC_014834.1 PFAM: DSBA oxidoreductase; KEGG: bbt:BBta_5468 hypothetical protein; DSBA oxidoreductase 1581072 10063687 Rpdx1_1486 Rhodopseudomonas palustris DX-1 DSBA oxidoreductase YP_004107840.1 1580407 D 652103 CDS YP_004107841.1 316932859 10063688 complement(1581073..1582293) 1 NC_014834.1 KEGG: nwi:Nwi_1273 hypothetical protein; hypothetical protein 1582293 10063688 Rpdx1_1487 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107841.1 1581073 R 652103 CDS YP_004107842.1 316932860 10063689 1582469..1583929 1 NC_014834.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: nwi:Nwi_1274 peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 1583929 10063689 Rpdx1_1488 Rhodopseudomonas palustris DX-1 peptidase C14 caspase catalytic subunit p20 YP_004107842.1 1582469 D 652103 CDS YP_004107843.1 316932861 10063690 complement(1583995..1584456) 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bja:blr5765 hypothetical protein; thioesterase superfamily protein 1584456 10063690 Rpdx1_1489 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004107843.1 1583995 R 652103 CDS YP_004107844.1 316932862 10063691 1584583..1584711 1 NC_014834.1 KEGG: tfu:Tfu_1773 FKBP-type peptidyl-prolyl cis-trans isomerase 1; FKBP-type peptidyl-prolyl cis-trans isomerase 1 1584711 10063691 Rpdx1_1490 Rhodopseudomonas palustris DX-1 FKBP-type peptidyl-prolyl cis-trans isomerase 1 YP_004107844.1 1584583 D 652103 CDS YP_004107845.1 316932863 10063692 1584753..1585019 1 NC_014834.1 KEGG: nha:Nham_1522 hypothetical protein; hypothetical protein 1585019 10063692 Rpdx1_1491 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107845.1 1584753 D 652103 CDS YP_004107846.1 316932864 10063693 1585178..1585855 1 NC_014834.1 KEGG: bja:bll2244 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 1585855 10063693 Rpdx1_1492 Rhodopseudomonas palustris DX-1 Crp/Fnr family transcriptional regulator YP_004107846.1 1585178 D 652103 CDS YP_004107847.1 316932865 10063694 complement(1585878..1586060) 1 NC_014834.1 manually curated; KEGG: bbt:BBta_5457 hypothetical protein; hypothetical protein 1586060 10063694 Rpdx1_1493 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107847.1 1585878 R 652103 CDS YP_004107848.1 316932866 10063695 complement(1586325..1586711) 1 NC_014834.1 KEGG: met:M446_4370 triple helix repeat-containing collagen; triple helix repeat-containing collagen 1586711 10063695 Rpdx1_1494 Rhodopseudomonas palustris DX-1 triple helix repeat-containing collagen YP_004107848.1 1586325 R 652103 CDS YP_004107849.1 316932867 10063696 1586793..1587587 1 NC_014834.1 KEGG: oaa:100075123 similar to splicing coactivator subunit SRm300; hypothetical protein 1587587 10063696 Rpdx1_1495 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107849.1 1586793 D 652103 CDS YP_004107850.1 316932868 10063697 1587637..1587825 1 NC_014834.1 KEGG: nml:Namu_4871 major facilitator superfamily MFS_1; major facilitator superfamily protein 1587825 10063697 Rpdx1_1496 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004107850.1 1587637 D 652103 CDS YP_004107851.1 316932869 10063698 complement(1587841..1588098) 1 NC_014834.1 KEGG: nha:Nham_4592 hypothetical protein; hypothetical protein 1588098 10063698 Rpdx1_1497 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107851.1 1587841 R 652103 CDS YP_004107852.1 316932870 10063699 1588348..1589439 1 NC_014834.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: nha:Nham_1616 recombinase A; SMART: AAA ATPase; recA protein 1589439 10063699 Rpdx1_1498 Rhodopseudomonas palustris DX-1 recA protein YP_004107852.1 1588348 D 652103 CDS YP_004107853.1 316932871 10063700 complement(1589706..1592612) 1 NC_014834.1 KEGG: bja:blr5753 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like; aromatic amino acid beta-eliminating lyase/threonine aldolase; glycine dehydrogenase 1592612 10063700 Rpdx1_1499 Rhodopseudomonas palustris DX-1 glycine dehydrogenase YP_004107853.1 1589706 R 652103 CDS YP_004107854.1 316932872 10063701 complement(1592780..1593145) 1 NC_014834.1 KEGG: bra:BRADO4983 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein 1593145 10063701 Rpdx1_1500 Rhodopseudomonas palustris DX-1 glycine cleavage system H protein YP_004107854.1 1592780 R 652103 CDS YP_004107855.1 316932873 10063702 complement(1593155..1594303) 1 NC_014834.1 KEGG: bja:blr5751 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; glycine cleavage system T protein 1594303 10063702 Rpdx1_1501 Rhodopseudomonas palustris DX-1 glycine cleavage system T protein YP_004107855.1 1593155 R 652103 CDS YP_004107856.1 316932874 10063703 1594771..1597443 1 NC_014834.1 KEGG: bja:bll5750 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; alanyl-tRNA synthetase 1597443 10063703 Rpdx1_1502 Rhodopseudomonas palustris DX-1 alanyl-tRNA synthetase YP_004107856.1 1594771 D 652103 CDS YP_004107857.1 316932875 10063704 1597457..1598200 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_3334 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1598200 10063704 Rpdx1_1503 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004107857.1 1597457 D 652103 CDS YP_004107858.1 316932876 10063705 complement(1598362..1600134) 1 NC_014834.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: kefC2; glutathione-regulated potassium-efflux system protein KefC-2; sodium/hydrogen exchanger 1600134 10063705 Rpdx1_1504 Rhodopseudomonas palustris DX-1 sodium/hydrogen exchanger YP_004107858.1 1598362 R 652103 CDS YP_004107859.1 316932877 10063706 1600293..1602050 1 NC_014834.1 KEGG: oca:OCAR_5438 inner membrane protein YbaL; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein 1602050 10063706 Rpdx1_1505 Rhodopseudomonas palustris DX-1 potassium efflux system protein YP_004107859.1 1600293 D 652103 CDS YP_004107860.1 316932878 10063707 complement(1602080..1603183) 1 NC_014834.1 KEGG: pfl:PFL_3499 PepSY-associated membrane protein; hypothetical protein 1603183 10063707 Rpdx1_1506 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107860.1 1602080 R 652103 CDS YP_004107861.1 316932879 10063708 complement(1603183..1603713) 1 NC_014834.1 KEGG: ssl:SS1G_01630 hypothetical protein; hypothetical protein 1603713 10063708 Rpdx1_1507 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107861.1 1603183 R 652103 CDS YP_004107862.1 316932880 10063709 complement(1603732..1606041) 1 NC_014834.1 KEGG: pfl:PFL_3498 outer membrane ferripyochelin receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor 1606041 10063709 Rpdx1_1508 Rhodopseudomonas palustris DX-1 TonB-dependent siderophore receptor YP_004107862.1 1603732 R 652103 CDS YP_004107863.1 316932881 10063710 complement(1606182..1607021) 1 NC_014834.1 KEGG: pag:PLES_07001 transcriptional regulator PchR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1607021 10063710 Rpdx1_1509 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004107863.1 1606182 R 652103 CDS YP_004107864.1 316932882 10063711 complement(1607174..1607506) 1 NC_014834.1 PFAM: protein of unknown function UPF0060; KEGG: oca:OCAR_5428 membrane protein; hypothetical protein 1607506 10063711 Rpdx1_1510 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107864.1 1607174 R 652103 CDS YP_004107865.1 316932883 10063712 complement(1607638..1608864) 1 NC_014834.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: bja:blr5747 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase 1608864 10063712 Rpdx1_1511 Rhodopseudomonas palustris DX-1 isocitrate dehydrogenase YP_004107865.1 1607638 R 652103 CDS YP_004107866.1 316932884 10063713 1609256..1610458 1 NC_014834.1 KEGG: bja:bll5746 tRNA/rRNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); TrmH family RNA methyltransferase 1610458 10063713 Rpdx1_1512 Rhodopseudomonas palustris DX-1 TrmH family RNA methyltransferase YP_004107866.1 1609256 D 652103 CDS YP_004107867.1 316932885 10063714 1610535..1610936 1 NC_014834.1 PFAM: Protein of unknown function DUF2147; KEGG: bbt:BBta_5701 hypothetical protein; hypothetical protein 1610936 10063714 Rpdx1_1513 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107867.1 1610535 D 652103 CDS YP_004107868.1 316932886 10063715 1610970..1611473 1 NC_014834.1 KEGG: dge:Dgeo_1718 uracil-DNA glycosylase superfamily protein; uracil-DNA glycosylase superfamily protein 1611473 10063715 Rpdx1_1514 Rhodopseudomonas palustris DX-1 uracil-DNA glycosylase superfamily protein YP_004107868.1 1610970 D 652103 CDS YP_004107869.1 316932887 10063716 1611492..1612016 1 NC_014834.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: bja:bll7224 transcription elongation factor regulatory protein; GreA/GreB family elongation factor 1612016 10063716 Rpdx1_1515 Rhodopseudomonas palustris DX-1 GreA/GreB family elongation factor YP_004107869.1 1611492 D 652103 CDS YP_004107870.1 316932888 10063717 complement(1612098..1612739) 1 NC_014834.1 KEGG: bte:BTH_II1885 ImcF-like family protein; hypothetical protein 1612739 10063717 Rpdx1_1516 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107870.1 1612098 R 652103 CDS YP_004107871.1 316932889 10063719 1613781..1614602 1 NC_014834.1 KEGG: oca:OCAR_5717 PEP phosphonomutase; PEP phosphonomutase 1614602 10063719 Rpdx1_1518 Rhodopseudomonas palustris DX-1 PEP phosphonomutase YP_004107871.1 1613781 D 652103 CDS YP_004107872.1 316932890 10063720 complement(1614780..1615838) 1 NC_014834.1 KEGG: cak:Caul_0007 putative DNA-binding protein; putative DNA-binding protein 1615838 10063720 Rpdx1_1519 Rhodopseudomonas palustris DX-1 putative DNA-binding protein YP_004107872.1 1614780 R 652103 CDS YP_004107873.1 316932891 10063721 complement(1616073..1616747) 1 NC_014834.1 KEGG: oca:OCAR_5446 hypothetical protein; hypothetical protein 1616747 10063721 Rpdx1_1520 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107873.1 1616073 R 652103 CDS YP_004107874.1 316932892 10063722 complement(1617253..1617576) 1 NC_014834.1 PFAM: protein of unknown function DUF1476; KEGG: nha:Nham_1632 hypothetical protein; hypothetical protein 1617576 10063722 Rpdx1_1521 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107874.1 1617253 R 652103 CDS YP_004107875.1 316932893 10063723 1617846..1618643 1 NC_014834.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: oca:OCAR_5449 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1618643 10063723 Rpdx1_1522 Rhodopseudomonas palustris DX-1 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004107875.1 1617846 D 652103 CDS YP_004107876.1 316932894 10063724 1618833..1619078 1 NC_014834.1 KEGG: oca:OCAR_5450 phosphoribosylformylglycinamidine synthase subunit PurS; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; phosphoribosylformylglycinamidine synthase PurS 1619078 10063724 Rpdx1_1523 Rhodopseudomonas palustris DX-1 phosphoribosylformylglycinamidine synthase PurS YP_004107876.1 1618833 D 652103 CDS YP_004107877.1 316932895 10063725 1619102..1619341 1 NC_014834.1 KEGG: bra:BRADO2778 hypothetical protein; hypothetical protein 1619341 10063725 Rpdx1_1524 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107877.1 1619102 D 652103 CDS YP_004107878.1 316932896 10063726 1619398..1620099 1 NC_014834.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: nwi:Nwi_1306 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; phosphoribosylformylglycinamidine synthase I 1620099 10063726 Rpdx1_1525 Rhodopseudomonas palustris DX-1 phosphoribosylformylglycinamidine synthase I YP_004107878.1 1619398 D 652103 CDS YP_004107879.1 316932897 10063727 complement(1620424..1621731) 1 NC_014834.1 KEGG: bra:BRADO2830 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase-like; fumarate lyase; adenylosuccinate lyase 1621731 10063727 Rpdx1_1526 Rhodopseudomonas palustris DX-1 adenylosuccinate lyase YP_004107879.1 1620424 R 652103 CDS YP_004107880.1 316932898 10063728 1622032..1622670 1 NC_014834.1 KEGG: mdo:100022100 similar to plasma phospholipid transfer protein; hypothetical protein 1622670 10063728 Rpdx1_1527 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107880.1 1622032 D 652103 CDS YP_004107881.1 316932899 10063729 complement(1622667..1623365) 1 NC_014834.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: bja:blr5680 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 1623365 10063729 Rpdx1_1528 Rhodopseudomonas palustris DX-1 ribulose-phosphate 3-epimerase YP_004107881.1 1622667 R 652103 CDS YP_004107882.1 316932900 10063730 1623633..1624397 1 NC_014834.1 KEGG: bra:BRADO2843 hypothetical protein; PFAM: EF-Hand, Calmodulin; SMART: Calcium-binding EF-hand-containing protein; calmodulin 1624397 10063730 Rpdx1_1529 Rhodopseudomonas palustris DX-1 calmodulin YP_004107882.1 1623633 D 652103 CDS YP_004107883.1 316932901 10063731 complement(1624387..1625385) 1 NC_014834.1 PFAM: peptidase S58 DmpA; KEGG: nwi:Nwi_2215 peptidase S58, DmpA; peptidase S58 DmpA 1625385 10063731 Rpdx1_1530 Rhodopseudomonas palustris DX-1 peptidase S58 DmpA YP_004107883.1 1624387 R 652103 CDS YP_004107884.1 316932902 10063732 1625531..1626265 1 NC_014834.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bja:blr2789 cytochrome c-type biogenesis protein; cytochrome c biogenesis transmembrane protein 1626265 10063732 Rpdx1_1531 Rhodopseudomonas palustris DX-1 cytochrome c biogenesis transmembrane protein YP_004107884.1 1625531 D 652103 CDS YP_004107885.1 316932903 10063733 1626520..1626807 1 NC_014834.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: nha:Nham_1409 excinuclease ABC subunit C; excinuclease ABC subunit C domain-containing protein 1626807 10063733 Rpdx1_1532 Rhodopseudomonas palustris DX-1 excinuclease ABC subunit C domain-containing protein YP_004107885.1 1626520 D 652103 CDS YP_004107886.1 316932904 10063734 complement(1626876..1627982) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_5327 high-affinity branched-chain amino acid ABC transporter (substrate-binding protein); extracellular ligand-binding receptor 1627982 10063734 Rpdx1_1533 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004107886.1 1626876 R 652103 CDS YP_004107887.1 316932905 10063735 complement(1628148..1628894) 1 NC_014834.1 KEGG: bbt:BBta_5326 high-affinity branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1628894 10063735 Rpdx1_1534 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107887.1 1628148 R 652103 CDS YP_004107888.1 316932906 10063736 complement(1629031..1629870) 1 NC_014834.1 KEGG: nwi:Nwi_2211 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1629870 10063736 Rpdx1_1535 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107888.1 1629031 R 652103 CDS YP_004107889.1 316932907 10063737 complement(1629867..1631195) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_5324 high-affinity branched-chain amino acid ABC transporter (permease protein); inner-membrane translocator 1631195 10063737 Rpdx1_1536 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004107889.1 1629867 R 652103 CDS YP_004107890.1 316932908 10063738 complement(1631208..1632125) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_5323 high-affinity branched-chain amino acid ABC transporter (permease protein); inner-membrane translocator 1632125 10063738 Rpdx1_1537 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004107890.1 1631208 R 652103 CDS YP_004107891.1 316932909 10063739 1632764..1633288 1 NC_014834.1 KEGG: nha:Nham_2610 hypothetical protein; hypothetical protein 1633288 10063739 Rpdx1_1538 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107891.1 1632764 D 652103 CDS YP_004107892.1 316932910 10063740 1633482..1633946 1 NC_014834.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: bja:bll5666 hypothetical protein; carbon monoxide dehydrogenase subunit G 1633946 10063740 Rpdx1_1539 Rhodopseudomonas palustris DX-1 carbon monoxide dehydrogenase subunit G YP_004107892.1 1633482 D 652103 CDS YP_004107893.1 316932911 10063741 1634121..1634606 1 NC_014834.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bra:BRADO2857 putative carbon-monoxide dehydrogenase small subunit, CoxS-like protein; (2Fe-2S)-binding domain-containing protein 1634606 10063741 Rpdx1_1540 Rhodopseudomonas palustris DX-1 (2Fe-2S)-binding domain-containing protein YP_004107893.1 1634121 D 652103 CDS YP_004107894.1 316932912 10063742 1634682..1635488 1 NC_014834.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bja:bll5664 putative carbon monoxide dehydrogenase medium subunit; FAD-binding molybdopterin dehydrogenase protein 1635488 10063742 Rpdx1_1541 Rhodopseudomonas palustris DX-1 FAD-binding molybdopterin dehydrogenase protein YP_004107894.1 1634682 D 652103 CDS YP_004107895.1 316932913 10063743 1635508..1636416 1 NC_014834.1 KEGG: bbt:BBta_5316 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase 1636416 10063743 Rpdx1_1542 Rhodopseudomonas palustris DX-1 ATPase YP_004107895.1 1635508 D 652103 CDS YP_004107896.1 316932914 10063744 1636659..1637876 1 NC_014834.1 PFAM: VWA containing CoxE family protein; KEGG: bja:bll5662 hypothetical protein; VWA containing CoxE family protein 1637876 10063744 Rpdx1_1543 Rhodopseudomonas palustris DX-1 VWA containing CoxE family protein YP_004107896.1 1636659 D 652103 CDS YP_004107897.1 316932915 10063745 1637912..1638238 1 NC_014834.1 PFAM: protein of unknown function DUF182; KEGG: bja:bll5661 hypothetical protein; hypothetical protein 1638238 10063745 Rpdx1_1544 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107897.1 1637912 D 652103 CDS YP_004107898.1 316932916 10063746 1638270..1638971 1 NC_014834.1 KEGG: bbt:BBta_5313 sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis; sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis 1638971 10063746 Rpdx1_1545 Rhodopseudomonas palustris DX-1 sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis YP_004107898.1 1638270 D 652103 CDS YP_004107899.1 316932917 10063747 1638968..1640569 1 NC_014834.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; molybdopterin binding domain; KEGG: bbt:BBta_5312 molybdenum cofactor cytidylyltransferase / molybdopterin molybdochelatase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1640569 10063747 Rpdx1_1546 Rhodopseudomonas palustris DX-1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004107899.1 1638968 D 652103 CDS YP_004107900.1 316932918 10063748 complement(1640580..1641410) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: swi:Swit_2160 LysR family transcriptional regulator; LysR family transcriptional regulator 1641410 10063748 Rpdx1_1547 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004107900.1 1640580 R 652103 CDS YP_004107901.1 316932919 10063749 1641510..1642262 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sme:SMc01153 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 1642262 10063749 Rpdx1_1548 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004107901.1 1641510 D 652103 CDS YP_004107902.1 316932920 10063750 1642363..1642746 1 NC_014834.1 KEGG: bja:bll5657 hypothetical protein; hypothetical protein 1642746 10063750 Rpdx1_1549 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107902.1 1642363 D 652103 CDS YP_004107903.1 316932921 10063751 1642707..1642856 1 NC_014834.1 hypothetical protein 1642856 10063751 Rpdx1_1550 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107903.1 1642707 D 652103 CDS YP_004107904.1 316932922 10063752 complement(1642867..1643043) 1 NC_014834.1 KEGG: bra:BRADO3443 hypothetical protein; hypothetical protein 1643043 10063752 Rpdx1_1551 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107904.1 1642867 R 652103 CDS YP_004107905.1 316932923 10063753 1643312..1644385 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: fre:Franean1_4360 serine/threonine protein kinase; SMART: GGDEF domain containing protein; diguanylate cyclase 1644385 10063753 Rpdx1_1552 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004107905.1 1643312 D 652103 CDS YP_004107906.1 316932924 10063754 1644456..1645172 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: nha:Nham_0716 TetR family transcriptional regulator; regulatory protein TetR 1645172 10063754 Rpdx1_1553 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107906.1 1644456 D 652103 CDS YP_004107907.1 316932925 10063755 1645169..1645969 1 NC_014834.1 PFAM: secretion protein HlyD family protein; KEGG: bja:bll5650 hypothetical protein; secretion protein HlyD family protein 1645969 10063755 Rpdx1_1554 Rhodopseudomonas palustris DX-1 secretion protein HlyD family protein YP_004107907.1 1645169 D 652103 CDS YP_004107908.1 316932926 10063756 1645966..1646919 1 NC_014834.1 KEGG: bja:bll5649 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1646919 10063756 Rpdx1_1555 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107908.1 1645966 D 652103 CDS YP_004107909.1 316932927 10063757 1646916..1648085 1 NC_014834.1 PFAM: ABC-2 type transporter; KEGG: bbt:BBta_5303 putative ABC transporter (fused ATP-binding and permease components); ABC-2 type transporter 1648085 10063757 Rpdx1_1556 Rhodopseudomonas palustris DX-1 ABC-2 type transporter YP_004107909.1 1646916 D 652103 CDS YP_004107910.1 316932928 10063758 complement(1648113..1649009) 1 NC_014834.1 KEGG: nha:Nham_2600 hypothetical protein; hypothetical protein 1649009 10063758 Rpdx1_1557 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107910.1 1648113 R 652103 CDS YP_004107911.1 316932929 10063759 complement(1649106..1649396) 1 NC_014834.1 KEGG: pam:PANA_0485 Tar; hypothetical protein 1649396 10063759 Rpdx1_1558 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107911.1 1649106 R 652103 CDS YP_004107912.1 316932930 10063760 complement(1649507..1650337) 1 NC_014834.1 PFAM: protein of unknown function DUF72; KEGG: bbt:BBta_5299 hypothetical protein; hypothetical protein 1650337 10063760 Rpdx1_1559 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107912.1 1649507 R 652103 CDS YP_004107913.1 316932931 10063761 1650565..1651701 1 NC_014834.1 KEGG: bbt:BBta_5297 putative dolichol-phosphate mannosyltransferase; PFAM: glycosyl transferase family 2; GtrA family protein; dolichyl-phosphate beta-D-mannosyltransferase 1651701 10063761 Rpdx1_1560 Rhodopseudomonas palustris DX-1 dolichyl-phosphate beta-D-mannosyltransferase YP_004107913.1 1650565 D 652103 CDS YP_004107914.1 316932932 10063762 1651709..1653205 1 NC_014834.1 KEGG: bja:bll5638 hypothetical protein; hypothetical protein 1653205 10063762 Rpdx1_1561 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107914.1 1651709 D 652103 CDS YP_004107915.1 316932933 10063763 1653329..1654546 1 NC_014834.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: nha:Nham_2703 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1654546 10063763 Rpdx1_1562 Rhodopseudomonas palustris DX-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004107915.1 1653329 D 652103 CDS YP_004107916.1 316932934 10063764 complement(1654656..1655549) 1 NC_014834.1 PFAM: PfkB domain protein; KEGG: bra:BRADO2493 putative sugar kinase; PfkB domain-containing protein 1655549 10063764 Rpdx1_1563 Rhodopseudomonas palustris DX-1 PfkB domain-containing protein YP_004107916.1 1654656 R 652103 CDS YP_004107917.1 316932935 10063765 1655887..1656759 1 NC_014834.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bra:BRADO2495 putative glyoxalase/bleomycin resistance protein/dioxygenase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 1656759 10063765 Rpdx1_1564 Rhodopseudomonas palustris DX-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_004107917.1 1655887 D 652103 CDS YP_004107918.1 316932936 10063766 complement(1656769..1658322) 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr2248 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1658322 10063766 Rpdx1_1565 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004107918.1 1656769 R 652103 CDS YP_004107919.1 316932937 10063767 complement(1658493..1659713) 1 NC_014834.1 PFAM: cytochrome P450; KEGG: bja:bll2856 cytochrome P450; cytochrome P450 1659713 10063767 Rpdx1_1566 Rhodopseudomonas palustris DX-1 cytochrome P450 YP_004107919.1 1658493 R 652103 CDS YP_004107920.1 316932938 10063768 1659970..1660671 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: nha:Nham_2701 TetR family transcriptional regulator; regulatory protein TetR 1660671 10063768 Rpdx1_1567 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004107920.1 1659970 D 652103 CDS YP_004107921.1 316932939 10063769 1660673..1661866 1 NC_014834.1 KEGG: nha:Nham_2700 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 1661866 10063769 Rpdx1_1568 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004107921.1 1660673 D 652103 CDS YP_004107922.1 316932940 10063770 1661986..1665090 1 NC_014834.1 PFAM: acriflavin resistance protein; KEGG: nwi:Nwi_2283 acriflavin resistance protein; acriflavin resistance protein 1665090 10063770 Rpdx1_1569 Rhodopseudomonas palustris DX-1 acriflavin resistance protein YP_004107922.1 1661986 D 652103 CDS YP_004107923.1 316932941 10063771 1665367..1666620 1 NC_014834.1 KEGG: nha:Nham_2698 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; D-amino-acid dehydrogenase 1666620 10063771 Rpdx1_1570 Rhodopseudomonas palustris DX-1 D-amino-acid dehydrogenase YP_004107923.1 1665367 D 652103 CDS YP_004107924.1 316932942 10063772 1666710..1666964 1 NC_014834.1 KEGG: bja:bsr2878 hypothetical protein; hypothetical protein 1666964 10063772 Rpdx1_1571 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107924.1 1666710 D 652103 CDS YP_004107925.1 316932943 10063773 1666983..1667774 1 NC_014834.1 KEGG: bja:blr2879 hypothetical protein; hypothetical protein 1667774 10063773 Rpdx1_1572 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107925.1 1666983 D 652103 CDS YP_004107926.1 316932944 10063774 1667821..1668141 1 NC_014834.1 KEGG: bbt:BBta_2862 hypothetical protein; hypothetical protein 1668141 10063774 Rpdx1_1573 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107926.1 1667821 D 652103 CDS YP_004107927.1 316932945 10063775 1668355..1668858 1 NC_014834.1 TIGRFAM: phasin; KEGG: bra:BRADO2517 hypothetical protein; phasin 1668858 10063775 Rpdx1_1574 Rhodopseudomonas palustris DX-1 phasin YP_004107927.1 1668355 D 652103 CDS YP_004107928.1 316932946 10063776 complement(1669085..1669759) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: xau:Xaut_0894 TetR family transcriptional regulator; TetR family transcriptional regulator 1669759 10063776 Rpdx1_1575 Rhodopseudomonas palustris DX-1 TetR family transcriptional regulator YP_004107928.1 1669085 R 652103 CDS YP_004107929.1 316932947 10063777 1669882..1670865 1 NC_014834.1 KEGG: bja:blr2891 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; phenylacetate-CoA oxygenase subunit PaaG 1670865 10063777 Rpdx1_1576 Rhodopseudomonas palustris DX-1 phenylacetate-CoA oxygenase subunit PaaG YP_004107929.1 1669882 D 652103 CDS YP_004107930.1 316932948 10063778 1670899..1671186 1 NC_014834.1 KEGG: bra:BRADO2520 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; phenylacetate-CoA oxygenase subunit PaaH 1671186 10063778 Rpdx1_1577 Rhodopseudomonas palustris DX-1 phenylacetate-CoA oxygenase subunit PaaH YP_004107930.1 1670899 D 652103 CDS YP_004107931.1 316932949 10063779 1671350..1672120 1 NC_014834.1 KEGG: bbt:BBta_2867 phenylacetic acid degradation protein PaaC; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; phenylacetate-CoA oxygenase subunit PaaI 1672120 10063779 Rpdx1_1578 Rhodopseudomonas palustris DX-1 phenylacetate-CoA oxygenase subunit PaaI YP_004107931.1 1671350 D 652103 CDS YP_004107932.1 316932950 10063780 1672117..1672617 1 NC_014834.1 KEGG: bbt:BBta_2868 phenylacetic acid degradation protein PaaD; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; phenylacetate-CoA oxygenase subunit PaaJ 1672617 10063780 Rpdx1_1579 Rhodopseudomonas palustris DX-1 phenylacetate-CoA oxygenase subunit PaaJ YP_004107932.1 1672117 D 652103 CDS YP_004107933.1 316932951 10063781 1672626..1673714 1 NC_014834.1 KEGG: bja:blr2895 putative ferredoxin reductase electron transfer component protein; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; phenylacetate-CoA oxygenase/reductase subunit PaaK 1673714 10063781 Rpdx1_1580 Rhodopseudomonas palustris DX-1 phenylacetate-CoA oxygenase/reductase subunit PaaK YP_004107933.1 1672626 D 652103 CDS YP_004107934.1 316932952 10063782 complement(1673869..1675494) 1 NC_014834.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: bbt:BBta_2937 hypothetical protein; thiamine pyrophosphate domain-containing TPP-binding protein 1675494 10063782 Rpdx1_1581 Rhodopseudomonas palustris DX-1 thiamine pyrophosphate domain-containing TPP-binding protein YP_004107934.1 1673869 R 652103 CDS YP_004107935.1 316932953 10063783 complement(1675523..1676395) 1 NC_014834.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bra:BRADO2592 putative 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), bifunctional protein isomerase/decarboxylase HpcE-like; fumarylacetoacetate (FAA) hydrolase 1676395 10063783 Rpdx1_1582 Rhodopseudomonas palustris DX-1 fumarylacetoacetate (FAA) hydrolase YP_004107935.1 1675523 R 652103 CDS YP_004107936.1 316932954 10063784 complement(1676550..1677527) 1 NC_014834.1 TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; KEGG: bja:bll2967 putative metapyrocatechase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1677527 10063784 Rpdx1_1583 Rhodopseudomonas palustris DX-1 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_004107936.1 1676550 R 652103 CDS YP_004107937.1 316932955 10063785 complement(1677697..1679238) 1 NC_014834.1 KEGG: bja:bll2968 NAD-dependent succinate aldehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 1679238 10063785 Rpdx1_1584 Rhodopseudomonas palustris DX-1 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase YP_004107937.1 1677697 R 652103 CDS YP_004107938.1 316932956 10063786 complement(1679231..1679629) 1 NC_014834.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bbt:BBta_2940 putative 5-carboxymethyl-2-hydroxymuconate isomerase, HpcD-like protein; 5-carboxymethyl-2-hydroxymuconate isomerase 1679629 10063786 Rpdx1_1585 Rhodopseudomonas palustris DX-1 5-carboxymethyl-2-hydroxymuconate isomerase YP_004107938.1 1679231 R 652103 CDS YP_004107939.1 316932957 10063787 1679790..1680455 1 NC_014834.1 TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: bja:blr2971 transcriptional regulatory protein; SMART: regulatory protein MarR; homoprotocatechuate degradation operon regulator HpaR 1680455 10063787 Rpdx1_1586 Rhodopseudomonas palustris DX-1 homoprotocatechuate degradation operon regulator HpaR YP_004107939.1 1679790 D 652103 CDS YP_004107940.1 316932958 10063788 1680496..1681581 1 NC_014834.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: bra:BRADO2597 hypothetical protein; malate/L-lactate dehydrogenase 1681581 10063788 Rpdx1_1587 Rhodopseudomonas palustris DX-1 malate/L-lactate dehydrogenase YP_004107940.1 1680496 D 652103 CDS YP_004107941.1 316932959 10063789 1681581..1681709 1 NC_014834.1 KEGG: bph:Bphy_1748 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 1681709 10063789 Rpdx1_1588 Rhodopseudomonas palustris DX-1 exodeoxyribonuclease V subunit beta YP_004107941.1 1681581 D 652103 CDS YP_004107942.1 316932960 10063790 1681901..1682677 1 NC_014834.1 KEGG: bra:BRADO2598 putative aldolase; PFAM: HpcH/HpaI aldolase; 4-hydroxy-2-oxovalerate aldolase 1682677 10063790 Rpdx1_1589 Rhodopseudomonas palustris DX-1 4-hydroxy-2-oxovalerate aldolase YP_004107942.1 1681901 D 652103 CDS YP_004107943.1 316932961 10063791 1682926..1684659 1 NC_014834.1 KEGG: jan:Jann_3430 hypothetical protein; hypothetical protein 1684659 10063791 Rpdx1_1590 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107943.1 1682926 D 652103 CDS YP_004107944.1 316932962 10063792 1684802..1688140 1 NC_014834.1 KEGG: bbt:BBta_2947 hypothetical protein; PFAM: Protein of unknown function DUF2126; transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; hypothetical protein 1688140 10063792 Rpdx1_1591 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107944.1 1684802 D 652103 CDS YP_004107945.1 316932963 10063793 1688166..1690667 1 NC_014834.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; protein of unknown function DUF403; KEGG: bbt:BBta_2948 hypothetical protein; hypothetical protein 1690667 10063793 Rpdx1_1592 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107945.1 1688166 D 652103 CDS YP_004107946.1 316932964 10063794 1690664..1691542 1 NC_014834.1 KEGG: bra:BRADO2603 hypothetical protein; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; transglutaminase domain-containing protein 1691542 10063794 Rpdx1_1593 Rhodopseudomonas palustris DX-1 transglutaminase domain-containing protein YP_004107946.1 1690664 D 652103 CDS YP_004107947.1 316932965 10063795 1691745..1692200 1 NC_014834.1 PFAM: Cache type 2 domain protein; KEGG: dma:DMR_10750 hypothetical protein; Cache type 2 domain-containing protein 1692200 10063795 Rpdx1_1594 Rhodopseudomonas palustris DX-1 Cache type 2 domain-containing protein YP_004107947.1 1691745 D 652103 CDS YP_004107948.1 316932966 10063796 1692254..1693957 1 NC_014834.1 KEGG: oca:OCAR_6729 methyl-accepting chemotaxis receptor/sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1693957 10063796 Rpdx1_1595 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004107948.1 1692254 D 652103 CDS YP_004107949.1 316932967 10063797 1694020..1695402 1 NC_014834.1 KEGG: bja:blr2994 ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit; ethanolamine ammonia-lyase 1695402 10063797 Rpdx1_1596 Rhodopseudomonas palustris DX-1 ethanolamine ammonia-lyase YP_004107949.1 1694020 D 652103 CDS YP_004107950.1 316932968 10063798 1695627..1697213 1 NC_014834.1 KEGG: bra:BRADO2623 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1697213 10063798 Rpdx1_1597 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004107950.1 1695627 D 652103 CDS YP_004107951.1 316932969 10063799 1697219..1697986 1 NC_014834.1 KEGG: bja:blr2996 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain; ethanolamine ammonia-lyase 1697986 10063799 Rpdx1_1598 Rhodopseudomonas palustris DX-1 ethanolamine ammonia-lyase YP_004107951.1 1697219 D 652103 CDS YP_004107952.1 316932970 10063800 1698194..1700566 1 NC_014834.1 KEGG: nha:Nham_2688 RND superfamily transporter; RND superfamily transporter 1700566 10063800 Rpdx1_1599 Rhodopseudomonas palustris DX-1 RND superfamily transporter YP_004107952.1 1698194 D 652103 CDS YP_004107953.1 316932971 10063801 complement(1700649..1701152) 1 NC_014834.1 KEGG: bra:BRADO2625 hypothetical protein; hypothetical protein 1701152 10063801 Rpdx1_1600 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107953.1 1700649 R 652103 CDS YP_004107954.1 316932972 10063802 1701533..1701772 1 NC_014834.1 KEGG: oca:OCAR_6662 hypothetical protein; hypothetical protein 1701772 10063802 Rpdx1_1601 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107954.1 1701533 D 652103 CDS YP_004107955.1 316932973 10063803 1701984..1702862 1 NC_014834.1 KEGG: bja:blr3001 hypothetical protein; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; squalene synthase 1702862 10063803 Rpdx1_1602 Rhodopseudomonas palustris DX-1 squalene synthase YP_004107955.1 1701984 D 652103 CDS YP_004107956.1 316932974 10063804 1702859..1703698 1 NC_014834.1 TIGRFAM: squalene synthase HpnD; KEGG: bja:blr3002 putative phytoene synthase; PFAM: Squalene/phytoene synthase; squalene synthase 1703698 10063804 Rpdx1_1603 Rhodopseudomonas palustris DX-1 squalene synthase YP_004107956.1 1702859 D 652103 CDS YP_004107957.1 316932975 10063805 1703698..1704954 1 NC_014834.1 KEGG: bja:blr3003 hypothetical protein; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; squalene-associated FAD-dependent desaturase 1704954 10063805 Rpdx1_1604 Rhodopseudomonas palustris DX-1 squalene-associated FAD-dependent desaturase YP_004107957.1 1703698 D 652103 CDS YP_004107958.1 316932976 10063806 1704987..1706948 1 NC_014834.1 TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; KEGG: bja:blr3004 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene-hopene cyclase 1706948 10063806 Rpdx1_1605 Rhodopseudomonas palustris DX-1 squalene-hopene cyclase YP_004107958.1 1704987 D 652103 CDS YP_004107959.1 316932977 10063807 1706945..1707688 1 NC_014834.1 KEGG: nha:Nham_2681 hypothetical protein; TIGRFAM: hopanoid-associated phosphorylase; PFAM: purine or other phosphorylase family 1; hopanoid-associated phosphorylase 1707688 10063807 Rpdx1_1606 Rhodopseudomonas palustris DX-1 hopanoid-associated phosphorylase YP_004107959.1 1706945 D 652103 CDS YP_004107960.1 316932978 10063809 complement(1708174..1709334) 1 NC_014834.1 KEGG: bja:bll3006 hypothetical protein; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; hopanoid biosynthesis associated radical SAM protein HpnH 1709334 10063809 Rpdx1_1608 Rhodopseudomonas palustris DX-1 hopanoid biosynthesis associated radical SAM protein HpnH YP_004107960.1 1708174 R 652103 CDS YP_004107961.1 316932979 10063810 complement(1709376..1710320) 1 NC_014834.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: nwi:Nwi_2266 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 1710320 10063810 Rpdx1_1609 Rhodopseudomonas palustris DX-1 hydroxymethylbutenyl pyrophosphate reductase YP_004107961.1 1709376 R 652103 CDS YP_004107962.1 316932980 10063811 1710633..1713239 1 NC_014834.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: nwi:Nwi_2265 hypothetical protein; hopanoid biosynthesis associated RND transporter like protein HpnN 1713239 10063811 Rpdx1_1610 Rhodopseudomonas palustris DX-1 hopanoid biosynthesis associated RND transporter like protein HpnN YP_004107962.1 1710633 D 652103 CDS YP_004107963.1 316932981 10063812 1713574..1714965 1 NC_014834.1 PFAM: aminotransferase class-III; KEGG: bra:BRADO2635 putative aminotransferase; putative ornithine aminotransferase; class III aminotransferase 1714965 10063812 Rpdx1_1611 Rhodopseudomonas palustris DX-1 class III aminotransferase YP_004107963.1 1713574 D 652103 CDS YP_004107964.1 316932982 10063813 1715197..1716036 1 NC_014834.1 PFAM: UspA domain protein; KEGG: msl:Msil_1452 UspA domain protein; UspA domain-containing protein 1716036 10063813 Rpdx1_1612 Rhodopseudomonas palustris DX-1 UspA domain-containing protein YP_004107964.1 1715197 D 652103 CDS YP_004107965.1 316932983 10063814 1716213..1716518 1 NC_014834.1 PFAM: SpoVT/AbrB domain protein; KEGG: bbt:BBta_4599 putative nitrogen regulatory protein; SpoVT/AbrB domain-containing protein 1716518 10063814 Rpdx1_1613 Rhodopseudomonas palustris DX-1 SpoVT/AbrB domain-containing protein YP_004107965.1 1716213 D 652103 CDS YP_004107966.1 316932984 10063815 1716529..1716936 1 NC_014834.1 KEGG: bbt:BBta_4600 putative nitrogen regulatory protein (NtrR-like), putative virulence associated protein (vap); manually curated; PFAM: PilT protein domain protein; PilT domain-containing protein 1716936 10063815 Rpdx1_1614 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004107966.1 1716529 D 652103 CDS YP_004107967.1 316932985 10063816 1717043..1717429 1 NC_014834.1 KEGG: gbe:GbCGDNIH1_1596 hypothetical protein; hypothetical protein 1717429 10063816 Rpdx1_1615 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107967.1 1717043 D 652103 CDS YP_004107968.1 316932986 10063817 1717469..1718923 1 NC_014834.1 KEGG: rci:RCIX1317 type I restriction modification system, methyltransferase subunit; PFAM: N-6 DNA methylase; adenine-specific DNA-methyltransferase 1718923 10063817 Rpdx1_1616 Rhodopseudomonas palustris DX-1 adenine-specific DNA-methyltransferase YP_004107968.1 1717469 D 652103 CDS YP_004107969.1 316932987 10063819 complement(1719500..1721119) 1 NC_014834.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: xau:Xaut_3245 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 1721119 10063819 Rpdx1_1618 Rhodopseudomonas palustris DX-1 glucose-methanol-choline oxidoreductase YP_004107969.1 1719500 R 652103 CDS YP_004107970.1 316932988 10063820 1721244..1722416 1 NC_014834.1 TIGRFAM: amidohydrolase; KEGG: nha:Nham_2671 peptidase M20D, amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1722416 10063820 Rpdx1_1619 Rhodopseudomonas palustris DX-1 amidohydrolase YP_004107970.1 1721244 D 652103 CDS YP_004107971.1 316932989 10063821 complement(1722365..1722538) 1 NC_014834.1 KEGG: oca:OCAR_5169 metallophosphoesterase; hypothetical protein 1722538 10063821 Rpdx1_1620 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107971.1 1722365 R 652103 CDS YP_004107972.1 316932990 10063822 complement(1722560..1724650) 1 NC_014834.1 PFAM: Carbohydrate-selective porin OprB; KEGG: bbt:BBta_3415 putative outer membrane protein of unknown function; carbohydrate-selective porin OprB 1724650 10063822 Rpdx1_1621 Rhodopseudomonas palustris DX-1 carbohydrate-selective porin OprB YP_004107972.1 1722560 R 652103 CDS YP_004107973.1 316932991 10063823 complement(1724745..1725794) 1 NC_014834.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: bra:BRADO6358 putative divalent cation transporter, CorA-like; Mg2 transporter protein CorA family protein 1725794 10063823 Rpdx1_1622 Rhodopseudomonas palustris DX-1 Mg2 transporter protein CorA family protein YP_004107973.1 1724745 R 652103 CDS YP_004107974.1 316932992 10063824 1726044..1726544 1 NC_014834.1 PFAM: protein of unknown function DUF892; KEGG: nha:Nham_2670 hypothetical protein; hypothetical protein 1726544 10063824 Rpdx1_1623 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107974.1 1726044 D 652103 CDS YP_004107975.1 316932993 10063825 complement(1726634..1727863) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7829 hypothetical protein; extracellular ligand-binding receptor 1727863 10063825 Rpdx1_1624 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004107975.1 1726634 R 652103 CDS YP_004107976.1 316932994 10063826 complement(1728213..1729448) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7827 ABC transporter substrate-binding protein; extracellular ligand-binding receptor 1729448 10063826 Rpdx1_1625 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004107976.1 1728213 R 652103 CDS YP_004107977.1 316932995 10063827 complement(1729630..1730853) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_7080 branched chain amino acid ABC transporter periplasmic-binding protein; extracellular ligand-binding receptor 1730853 10063827 Rpdx1_1626 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004107977.1 1729630 R 652103 CDS YP_004107978.1 316932996 10063828 complement(1731090..1732109) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bra:BRADO0976 high-affinity branched-chain amino acid ABC transporter permease; inner-membrane translocator 1732109 10063828 Rpdx1_1627 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004107978.1 1731090 R 652103 CDS YP_004107979.1 316932997 10063829 complement(1732112..1732990) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_7078 putative high-affinity branched-chain amino acid transport system permease protein LivH; inner-membrane translocator 1732990 10063829 Rpdx1_1628 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004107979.1 1732112 R 652103 CDS YP_004107980.1 316932998 10063830 complement(1733002..1733715) 1 NC_014834.1 KEGG: bja:blr7824 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1733715 10063830 Rpdx1_1629 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107980.1 1733002 R 652103 CDS YP_004107981.1 316932999 10063831 complement(1733712..1734512) 1 NC_014834.1 KEGG: bja:blr7823 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1734512 10063831 Rpdx1_1630 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004107981.1 1733712 R 652103 CDS YP_004107982.1 316933000 10063832 complement(1734543..1735409) 1 NC_014834.1 KEGG: bja:blr7822 transcriptional regulatory protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 1735409 10063832 Rpdx1_1631 Rhodopseudomonas palustris DX-1 IclR family transcriptional regulator YP_004107982.1 1734543 R 652103 CDS YP_004107983.1 316933001 10063833 1735541..1737640 1 NC_014834.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bja:bll7821 fatty oxidation complex alpha subunit; NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein 1737640 10063833 Rpdx1_1632 Rhodopseudomonas palustris DX-1 NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein YP_004107983.1 1735541 D 652103 CDS YP_004107984.1 316933002 10063835 1737807..1739465 1 NC_014834.1 KEGG: bra:BRADO0982 putative long-chain-fatty-acid--CoA ligase; putative long-chain acyl-CoA synthetase; pimeloyl-CoA ligase PimA; TIGRFAM: dicarboxylate/CoA ligase PimA; PFAM: AMP-dependent synthetase and ligase; dicarboxylate/CoA ligase PimA 1739465 10063835 Rpdx1_1634 Rhodopseudomonas palustris DX-1 dicarboxylate/CoA ligase PimA YP_004107984.1 1737807 D 652103 CDS YP_004107985.1 316933003 10063836 1739497..1740684 1 NC_014834.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bbt:BBta_7072 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 1740684 10063836 Rpdx1_1635 Rhodopseudomonas palustris DX-1 acetyl-CoA acetyltransferase YP_004107985.1 1739497 D 652103 CDS YP_004107986.1 316933004 10063837 1740844..1742034 1 NC_014834.1 KEGG: bra:BRADO0984 putative acyl-CoA dehydrogenase; pimeloyl-CoA dehydrogenase PimC (large subunit); TIGRFAM: pimeloyl-CoA dehydrogenase, large subunit; PFAM: acyl-CoA dehydrogenase domain protein; pimeloyl-CoA dehydrogenase large subunit 1742034 10063837 Rpdx1_1636 Rhodopseudomonas palustris DX-1 pimeloyl-CoA dehydrogenase large subunit YP_004107986.1 1740844 D 652103 CDS YP_004107987.1 316933005 10063838 1742202..1743344 1 NC_014834.1 KEGG: bra:BRADO0985 putative acyl-CoA dehydrogenase; pimeloyl-CoA dehydrogenase PimD (small subunit); TIGRFAM: pimeloyl-CoA dehydrogenase, small subunit; PFAM: acyl-CoA dehydrogenase domain protein; pimeloyl-CoA dehydrogenase small subunit 1743344 10063838 Rpdx1_1637 Rhodopseudomonas palustris DX-1 pimeloyl-CoA dehydrogenase small subunit YP_004107987.1 1742202 D 652103 CDS YP_004107988.1 316933006 10063839 1743478..1744251 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_7068 SDR family dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 1744251 10063839 Rpdx1_1638 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004107988.1 1743478 D 652103 CDS YP_004107989.1 316933007 10063840 complement(1744396..1746015) 1 NC_014834.1 PFAM: FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bra:BRADO3794 sulfite reductase; FAD-binding domain-containing protein 1746015 10063840 Rpdx1_1639 Rhodopseudomonas palustris DX-1 FAD-binding domain-containing protein YP_004107989.1 1744396 R 652103 CDS YP_004107990.1 316933008 10063841 complement(1746012..1747784) 1 NC_014834.1 KEGG: bra:BRADO3793 ferredoxin-nitrite reductase; TIGRFAM: precorrin-3B synthase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; precorrin-3B synthase 1747784 10063841 Rpdx1_1640 Rhodopseudomonas palustris DX-1 precorrin-3B synthase YP_004107990.1 1746012 R 652103 CDS YP_004107991.1 316933009 10063842 complement(1747827..1748249) 1 NC_014834.1 PFAM: globin; KEGG: azc:AZC_0683 putative hemoprotein; globin 1748249 10063842 Rpdx1_1641 Rhodopseudomonas palustris DX-1 globin YP_004107991.1 1747827 R 652103 CDS YP_004107992.1 316933010 10063843 complement(1748607..1749047) 1 NC_014834.1 PFAM: globin; KEGG: bbt:BBta_3847 putative globin-like protein; globin 1749047 10063843 Rpdx1_1642 Rhodopseudomonas palustris DX-1 globin YP_004107992.1 1748607 R 652103 CDS YP_004107993.1 316933011 10063844 complement(1749068..1750228) 1 NC_014834.1 KEGG: bja:bll4572 putative nitrate transport protein; putative nitrate transport protein 1750228 10063844 Rpdx1_1643 Rhodopseudomonas palustris DX-1 putative nitrate transport protein YP_004107993.1 1749068 R 652103 CDS YP_004107994.1 316933012 10063845 complement(1750225..1750377) 1 NC_014834.1 KEGG: nwi:Nwi_1288 hypothetical protein; hypothetical protein 1750377 10063845 Rpdx1_1644 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107994.1 1750225 R 652103 CDS YP_004107995.1 316933013 10063846 complement(1750374..1750958) 1 NC_014834.1 PFAM: ANTAR domain protein; response regulator receiver; KEGG: bja:bll4573 two-component response regulator; response regulator receiver and ANTAR domain-containing protein 1750958 10063846 Rpdx1_1645 Rhodopseudomonas palustris DX-1 response regulator receiver and ANTAR domain-containing protein YP_004107995.1 1750374 R 652103 CDS YP_004107996.1 316933014 10063847 1751167..1752669 1 NC_014834.1 KEGG: bbt:BBta_7067 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; glycerol kinase 1752669 10063847 Rpdx1_1646 Rhodopseudomonas palustris DX-1 glycerol kinase YP_004107996.1 1751167 D 652103 CDS YP_004107997.1 316933015 10063848 1752687..1752923 1 NC_014834.1 KEGG: spe:Spro_4104 hypothetical protein; hypothetical protein 1752923 10063848 Rpdx1_1647 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107997.1 1752687 D 652103 CDS YP_004107998.1 316933016 10063849 1752904..1753167 1 NC_014834.1 KEGG: tgr:Tgr7_2980 hypothetical protein; hypothetical protein 1753167 10063849 Rpdx1_1648 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004107998.1 1752904 D 652103 CDS YP_004107999.1 316933017 10063850 1753309..1753941 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bja:blr1415 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein 1753941 10063850 Rpdx1_1649 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004107999.1 1753309 D 652103 CDS YP_004108000.1 316933018 10063851 complement(1754732..1758613) 1 NC_014834.1 KEGG: bra:BRADO0994 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; methionine synthase 1758613 10063851 Rpdx1_1650 Rhodopseudomonas palustris DX-1 methionine synthase YP_004108000.1 1754732 R 652103 CDS YP_004108001.1 316933019 10063852 complement(1758625..1759026) 1 NC_014834.1 KEGG: spe:Spro_1572 hypothetical protein; hypothetical protein 1759026 10063852 Rpdx1_1651 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108001.1 1758625 R 652103 CDS YP_004108002.1 316933020 10063853 complement(1759110..1759997) 1 NC_014834.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: bbt:BBta_7060 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 1759997 10063853 Rpdx1_1652 Rhodopseudomonas palustris DX-1 5,10-methylenetetrahydrofolate reductase YP_004108002.1 1759110 R 652103 CDS YP_004108003.1 316933021 10063854 1760401..1761423 1 NC_014834.1 KEGG: bja:blr1420 flavin dependant oxidoreductase; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; luciferase family oxidoreductase 1761423 10063854 Rpdx1_1653 Rhodopseudomonas palustris DX-1 luciferase family oxidoreductase YP_004108003.1 1760401 D 652103 CDS YP_004108004.1 316933022 10063855 complement(1761537..1762391) 1 NC_014834.1 KEGG: bbt:BBta_7058 prephenate dehydratase; PFAM: prephenate dehydratase; Prephenate dehydratase 1762391 10063855 Rpdx1_1654 Rhodopseudomonas palustris DX-1 Prephenate dehydratase YP_004108004.1 1761537 R 652103 CDS YP_004108005.1 316933023 10063856 complement(1762451..1763188) 1 NC_014834.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: nha:Nham_0376 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1763188 10063856 Rpdx1_1655 Rhodopseudomonas palustris DX-1 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_004108005.1 1762451 R 652103 CDS YP_004108006.1 316933024 10063857 1763416..1763970 1 NC_014834.1 PFAM: cytochrome c class I; KEGG: bja:blr1423 cytochrome c; cytochrome c class I 1763970 10063857 Rpdx1_1656 Rhodopseudomonas palustris DX-1 cytochrome c class I YP_004108006.1 1763416 D 652103 CDS YP_004108007.1 316933025 10063858 1764182..1766077 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_7055 oligopeptide ABC transporter periplasmic substrate-binding protein; family 5 extracellular solute-binding protein 1766077 10063858 Rpdx1_1657 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004108007.1 1764182 D 652103 CDS YP_004108008.1 316933026 10063859 1766092..1767945 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: nha:Nham_0379 extracellular solute-binding protein; family 5 extracellular solute-binding protein 1767945 10063859 Rpdx1_1658 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004108008.1 1766092 D 652103 CDS YP_004108009.1 316933027 10063860 1767947..1769056 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nha:Nham_0380 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 1769056 10063860 Rpdx1_1659 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004108009.1 1767947 D 652103 CDS YP_004108010.1 316933028 10063861 1769056..1770234 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nwi:Nwi_0291 binding-protein dependent transport system inner membrane protein; binding-protein-dependent transporter inner membrane component 1770234 10063861 Rpdx1_1660 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004108010.1 1769056 D 652103 CDS YP_004108011.1 316933029 10063862 1770240..1771877 1 NC_014834.1 KEGG: nwi:Nwi_0292 ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter-like protein 1771877 10063862 Rpdx1_1661 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108011.1 1770240 D 652103 CDS YP_004108012.1 316933030 10063863 1771885..1772523 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: xau:Xaut_2637 NUDIX hydrolase; NUDIX hydrolase 1772523 10063863 Rpdx1_1662 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004108012.1 1771885 D 652103 CDS YP_004108013.1 316933031 10063864 complement(1772507..1773364) 1 NC_014834.1 PFAM: NLP/P60 protein; KEGG: bbt:BBta_7040 NLP/P60 family protein; NLP/P60 protein 1773364 10063864 Rpdx1_1663 Rhodopseudomonas palustris DX-1 NLP/P60 protein YP_004108013.1 1772507 R 652103 CDS YP_004108014.1 316933032 10063865 complement(1773357..1774739) 1 NC_014834.1 KEGG: nha:Nham_0384 leucyl aminopeptidase; manually curated; PFAM: peptidase M17 leucyl aminopeptidase domain protein; peptidase M17 leucyl aminopeptidase domain-containing protein 1774739 10063865 Rpdx1_1664 Rhodopseudomonas palustris DX-1 peptidase M17 leucyl aminopeptidase domain-containing protein YP_004108014.1 1773357 R 652103 CDS YP_004108015.1 316933033 10063866 1774852..1775643 1 NC_014834.1 KEGG: nha:Nham_0385 tetratricopeptide TPR_2; tetratricopeptide-repeat containing protein 1775643 10063866 Rpdx1_1665 Rhodopseudomonas palustris DX-1 tetratricopeptide-repeat containing protein YP_004108015.1 1774852 D 652103 CDS YP_004108016.1 316933034 10063867 complement(1775672..1776646) 1 NC_014834.1 PFAM: Type II secretion system F domain; KEGG: nha:Nham_0386 type II secretion system protein; Type II secretion system F domain 1776646 10063867 Rpdx1_1666 Rhodopseudomonas palustris DX-1 Type II secretion system F domain YP_004108016.1 1775672 R 652103 CDS YP_004108017.1 316933035 10063868 complement(1776656..1777630) 1 NC_014834.1 PFAM: Type II secretion system F domain; KEGG: bra:BRADO1015 putative pilus assembly protein; putative membrane protein; Type II secretion system F domain 1777630 10063868 Rpdx1_1667 Rhodopseudomonas palustris DX-1 Type II secretion system F domain YP_004108017.1 1776656 R 652103 CDS YP_004108018.1 316933036 10063869 complement(1777643..1779103) 1 NC_014834.1 PFAM: type II secretion system protein E; KEGG: bja:bll1436 pilus assembly protein; type II secretion system protein E 1779103 10063869 Rpdx1_1668 Rhodopseudomonas palustris DX-1 type II secretion system protein E YP_004108018.1 1777643 R 652103 CDS YP_004108019.1 316933037 10063870 complement(1779125..1780396) 1 NC_014834.1 KEGG: bra:BRADO1017 putative pilus assembly protein CpaE; putative pilus assembly protein CpaE 1780396 10063870 Rpdx1_1669 Rhodopseudomonas palustris DX-1 putative pilus assembly protein CpaE YP_004108019.1 1779125 R 652103 CDS YP_004108020.1 316933038 10063871 complement(1780393..1781121) 1 NC_014834.1 KEGG: nha:Nham_0390 pilus assembly protein CpaD; TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: Pilus biogenesis CpaD-related; pilus biogenesis lipoprotein CpaD 1781121 10063871 Rpdx1_1670 Rhodopseudomonas palustris DX-1 pilus biogenesis lipoprotein CpaD YP_004108020.1 1780393 R 652103 CDS YP_004108021.1 316933039 10063872 complement(1781141..1782577) 1 NC_014834.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: nha:Nham_0391 type II and III secretion system protein; type II and III secretion system protein 1782577 10063872 Rpdx1_1671 Rhodopseudomonas palustris DX-1 type II and III secretion system protein YP_004108021.1 1781141 R 652103 CDS YP_004108022.1 316933040 10063873 complement(1782591..1783391) 1 NC_014834.1 KEGG: nha:Nham_0392 Flp pilus assembly CpaB; TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; Flp pilus assembly protein CpaB 1783391 10063873 Rpdx1_1672 Rhodopseudomonas palustris DX-1 Flp pilus assembly protein CpaB YP_004108022.1 1782591 R 652103 CDS YP_004108023.1 316933041 10063874 complement(1783498..1784022) 1 NC_014834.1 PFAM: peptidase A24A prepilin type IV; KEGG: nha:Nham_0393 peptidase A24A, prepilin type IV; peptidase A24A prepilin type IV 1784022 10063874 Rpdx1_1673 Rhodopseudomonas palustris DX-1 peptidase A24A prepilin type IV YP_004108023.1 1783498 R 652103 CDS YP_004108024.1 316933042 10063875 complement(1784368..1784535) 1 NC_014834.1 PFAM: Flp/Fap pilin component; KEGG: bbt:BBta_7028 putative Flp/Fap pilin component; Flp/Fap pilin component 1784535 10063875 Rpdx1_1674 Rhodopseudomonas palustris DX-1 Flp/Fap pilin component YP_004108024.1 1784368 R 652103 CDS YP_004108025.1 316933043 10063876 1784935..1785423 1 NC_014834.1 KEGG: nwi:Nwi_0305 hypothetical protein; hypothetical protein 1785423 10063876 Rpdx1_1675 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108025.1 1784935 D 652103 CDS YP_004108026.1 316933044 10063877 1785588..1786109 1 NC_014834.1 PFAM: TadE family protein; KEGG: bbt:BBta_7024 hypothetical protein; TadE family protein 1786109 10063877 Rpdx1_1676 Rhodopseudomonas palustris DX-1 TadE family protein YP_004108026.1 1785588 D 652103 CDS YP_004108027.1 316933045 10063878 1786122..1786739 1 NC_014834.1 PFAM: TadE family protein; KEGG: bbt:BBta_7023 hypothetical protein; TadE family protein 1786739 10063878 Rpdx1_1677 Rhodopseudomonas palustris DX-1 TadE family protein YP_004108027.1 1786122 D 652103 CDS YP_004108028.1 316933046 10063879 complement(1786880..1787134) 1 NC_014834.1 KEGG: bbt:BBta_7022 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 1787134 10063879 Rpdx1_1678 Rhodopseudomonas palustris DX-1 cold-shock DNA-binding domain-containing protein YP_004108028.1 1786880 R 652103 CDS YP_004108029.1 316933047 10063880 complement(1787374..1787652) 1 NC_014834.1 KEGG: nwi:Nwi_0312 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; translation initiation factor IF-1 1787652 10063880 Rpdx1_1679 Rhodopseudomonas palustris DX-1 translation initiation factor IF-1 YP_004108029.1 1787374 R 652103 CDS YP_004108030.1 316933048 10063881 complement(1787677..1789098) 1 NC_014834.1 KEGG: nha:Nham_0400 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 1789098 10063881 Rpdx1_1680 Rhodopseudomonas palustris DX-1 DEAD/DEAH box helicase YP_004108030.1 1787677 R 652103 CDS YP_004108031.1 316933049 10063882 1789594..1790916 1 NC_014834.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bra:BRADO1031 branched chain amino-acid ABC transporter substrate-binding protein; urea ABC transporter urea-binding protein 1790916 10063882 Rpdx1_1681 Rhodopseudomonas palustris DX-1 urea ABC transporter urea-binding protein YP_004108031.1 1789594 D 652103 CDS YP_004108032.1 316933050 10063883 1791025..1792638 1 NC_014834.1 KEGG: bja:blr1449 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; urea ABC transporter permease UrtB 1792638 10063883 Rpdx1_1682 Rhodopseudomonas palustris DX-1 urea ABC transporter permease UrtB YP_004108032.1 1791025 D 652103 CDS YP_004108033.1 316933051 10063884 1792796..1793992 1 NC_014834.1 KEGG: bja:blr1450 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; urea ABC transporter permease UrtC 1793992 10063884 Rpdx1_1683 Rhodopseudomonas palustris DX-1 urea ABC transporter permease UrtC YP_004108033.1 1792796 D 652103 CDS YP_004108034.1 316933052 10063885 1793989..1794753 1 NC_014834.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: bbt:BBta_7015 putative branched-chain amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtD 1794753 10063885 Rpdx1_1684 Rhodopseudomonas palustris DX-1 urea ABC transporter ATP-binding protein UrtD YP_004108034.1 1793989 D 652103 CDS YP_004108035.1 316933053 10063886 1794865..1795560 1 NC_014834.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: bbt:BBta_7014 putative branched-chain amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE 1795560 10063886 Rpdx1_1685 Rhodopseudomonas palustris DX-1 urea ABC transporter ATP-binding protein UrtE YP_004108035.1 1794865 D 652103 CDS YP_004108036.1 316933054 10063887 1795596..1796432 1 NC_014834.1 PFAM: Urease accessory protein UreD; KEGG: bja:blr1453 urease accessory protein; Urease accessory protein UreD 1796432 10063887 Rpdx1_1686 Rhodopseudomonas palustris DX-1 Urease accessory protein UreD YP_004108036.1 1795596 D 652103 CDS YP_004108037.1 316933055 10063888 1796479..1796781 1 NC_014834.1 TIGRFAM: urease, gamma subunit; KEGG: sme:SMc01941 urease subunit gamma; PFAM: Urease gamma subunit region; urease subunit gamma 1796781 10063888 Rpdx1_1687 Rhodopseudomonas palustris DX-1 urease subunit gamma YP_004108037.1 1796479 D 652103 CDS YP_004108038.1 316933056 10063889 1796941..1797246 1 NC_014834.1 TIGRFAM: urease, beta subunit; KEGG: bbt:BBta_7011 urease subunit beta; PFAM: Urease beta subunit; urease subunit beta 1797246 10063889 Rpdx1_1688 Rhodopseudomonas palustris DX-1 urease subunit beta YP_004108038.1 1796941 D 652103 CDS YP_004108039.1 316933057 10063890 1797248..1798960 1 NC_014834.1 TIGRFAM: urease, alpha subunit; KEGG: bja:blr1457 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein; urease subunit alpha 1798960 10063890 Rpdx1_1689 Rhodopseudomonas palustris DX-1 urease subunit alpha YP_004108039.1 1797248 D 652103 CDS YP_004108040.1 316933058 10063891 1799174..1799473 1 NC_014834.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bja:bsr1458 hypothetical protein; antibiotic biosynthesis monooxygenase 1799473 10063891 Rpdx1_1690 Rhodopseudomonas palustris DX-1 antibiotic biosynthesis monooxygenase YP_004108040.1 1799174 D 652103 CDS YP_004108041.1 316933059 10063892 1799482..1800138 1 NC_014834.1 PFAM: UreE urease accessory domain protein; KEGG: bra:BRADO1043 urease accessory protein UreE; UreE urease accessory domain-containing protein 1800138 10063892 Rpdx1_1691 Rhodopseudomonas palustris DX-1 UreE urease accessory domain-containing protein YP_004108041.1 1799482 D 652103 CDS YP_004108042.1 316933060 10063893 1800128..1800850 1 NC_014834.1 PFAM: Urease accessory protein UreF; KEGG: bja:blr1459 urease accessory protein; Urease accessory protein UreF 1800850 10063893 Rpdx1_1692 Rhodopseudomonas palustris DX-1 Urease accessory protein UreF YP_004108042.1 1800128 D 652103 CDS YP_004108043.1 316933061 10063894 complement(1801003..1802565) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll1329 acyl-CoA synthetase; AMP-dependent synthetase and ligase 1802565 10063894 Rpdx1_1693 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004108043.1 1801003 R 652103 CDS YP_004108044.1 316933062 10063895 1802677..1803639 1 NC_014834.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bja:blr1330 hypothetical protein; 2-nitropropane dioxygenase 1803639 10063895 Rpdx1_1694 Rhodopseudomonas palustris DX-1 2-nitropropane dioxygenase YP_004108044.1 1802677 D 652103 CDS YP_004108045.1 316933063 10063896 1803719..1804771 1 NC_014834.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bja:blr2780 NAD-dependent alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 1804771 10063896 Rpdx1_1695 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase GroES domain-containing protein YP_004108045.1 1803719 D 652103 CDS YP_004108046.1 316933064 10063897 complement(1804881..1805501) 1 NC_014834.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: mes:Meso_2432 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A 1805501 10063897 Rpdx1_1696 Rhodopseudomonas palustris DX-1 molybdopterin-guanine dinucleotide biosynthesis protein A YP_004108046.1 1804881 R 652103 CDS YP_004108047.1 316933065 10063898 1805629..1805886 1 NC_014834.1 PFAM: SirA family protein; KEGG: bja:bsr2313 hypothetical protein; SirA family protein 1805886 10063898 Rpdx1_1697 Rhodopseudomonas palustris DX-1 SirA family protein YP_004108047.1 1805629 D 652103 CDS YP_004108048.1 316933066 10063899 1805950..1806369 1 NC_014834.1 KEGG: oca:OCAR_4053 hypothetical protein; hypothetical protein 1806369 10063899 Rpdx1_1698 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108048.1 1805950 D 652103 CDS YP_004108049.1 316933067 10063900 complement(1806434..1807393) 1 NC_014834.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: met:M446_5547 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 1807393 10063900 Rpdx1_1699 Rhodopseudomonas palustris DX-1 transposase IS116/IS110/IS902 family protein YP_004108049.1 1806434 R 652103 CDS YP_004108050.1 316933068 10063901 complement(1807734..1808618) 1 NC_014834.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: bja:blr6774 hypothetical protein; SMART: Ku domain protein; Ku protein 1808618 10063901 Rpdx1_1700 Rhodopseudomonas palustris DX-1 Ku protein YP_004108050.1 1807734 R 652103 CDS YP_004108051.1 316933069 10063902 1808752..1811496 1 NC_014834.1 KEGG: bja:bll6773 ATP-dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA primase small subunit; DNA ligase D 1811496 10063902 Rpdx1_1701 Rhodopseudomonas palustris DX-1 DNA ligase D YP_004108051.1 1808752 D 652103 CDS YP_004108052.1 316933070 10063903 complement(1811580..1811744) 1 NC_014834.1 KEGG: nha:Nham_2869 hypothetical protein; hypothetical protein 1811744 10063903 Rpdx1_1702 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108052.1 1811580 R 652103 CDS YP_004108053.1 316933071 10063904 1811921..1812229 1 NC_014834.1 KEGG: bbt:BBta_6327 hypothetical protein; hypothetical protein 1812229 10063904 Rpdx1_1703 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108053.1 1811921 D 652103 CDS YP_004108054.1 316933072 10063905 complement(1812627..1815413) 1 NC_014834.1 SMART: alpha amylase catalytic sub domain; TIGRFAM: malto-oligosyltrehalose synthase; KEGG: bra:BRADO5820 putative glycosyl hydrolase (glycosidase); PFAM: alpha amylase catalytic region; malto-oligosyltrehalose synthase 1815413 10063905 Rpdx1_1704 Rhodopseudomonas palustris DX-1 malto-oligosyltrehalose synthase YP_004108054.1 1812627 R 652103 CDS YP_004108055.1 316933073 10063906 complement(1815414..1817183) 1 NC_014834.1 TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: bbt:BBta_6325 putative maltooligosyltrehalose trehalohydrolase; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 1817183 10063906 Rpdx1_1705 Rhodopseudomonas palustris DX-1 malto-oligosyltrehalose trehalohydrolase YP_004108055.1 1815414 R 652103 CDS YP_004108056.1 316933074 10063907 complement(1817180..1819261) 1 NC_014834.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: bja:blr6769 glycogen debranching enzyme; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 1819261 10063907 Rpdx1_1706 Rhodopseudomonas palustris DX-1 glycogen debranching protein GlgX YP_004108056.1 1817180 R 652103 CDS YP_004108057.1 316933075 10063908 complement(1819524..1821674) 1 NC_014834.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; KEGG: bja:blr6768 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan branching protein 1821674 10063908 Rpdx1_1707 Rhodopseudomonas palustris DX-1 1,4-alpha-glucan branching protein YP_004108057.1 1819524 R 652103 CDS YP_004108058.1 316933076 10063909 complement(1821671..1824973) 1 NC_014834.1 TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; aminoglycoside phosphotransferase; KEGG: bja:blr6767 trehalose synthase; SMART: alpha amylase catalytic sub domain; trehalose synthase 1824973 10063909 Rpdx1_1708 Rhodopseudomonas palustris DX-1 trehalose synthase YP_004108058.1 1821671 R 652103 CDS YP_004108059.1 316933077 10063910 complement(1824984..1826975) 1 NC_014834.1 KEGG: nha:Nham_1466 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 1826975 10063910 Rpdx1_1709 Rhodopseudomonas palustris DX-1 alpha amylase YP_004108059.1 1824984 R 652103 CDS YP_004108060.1 316933078 10063911 1827141..1829099 1 NC_014834.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: bra:BRADO5815 putative 4-alpha-glucanotransferase (MalQ-like); PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase 1829099 10063911 Rpdx1_1710 Rhodopseudomonas palustris DX-1 4-alpha-glucanotransferase YP_004108060.1 1827141 D 652103 CDS YP_004108061.1 316933079 10063912 1829096..1830913 1 NC_014834.1 PFAM: glycoside hydrolase 15-related; KEGG: bja:bll6764 hypothetical protein; glycoside hydrolase 15-like protein 1830913 10063912 Rpdx1_1711 Rhodopseudomonas palustris DX-1 glycoside hydrolase 15-like protein YP_004108061.1 1829096 D 652103 CDS YP_004108062.1 316933080 10063913 complement(1830910..1831728) 1 NC_014834.1 KEGG: bja:blr6763 hypothetical protein; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 1831728 10063913 Rpdx1_1712 Rhodopseudomonas palustris DX-1 cof family hydrolase YP_004108062.1 1830910 R 652103 CDS YP_004108063.1 316933081 10063914 complement(1831855..1832397) 1 NC_014834.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: bra:BRADO5812 putative bifunctional: 6-phosphogluconolactonase (N-terminal) (Pgl); D-gluconate kinase (C-terminal); PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase 1832397 10063914 Rpdx1_1713 Rhodopseudomonas palustris DX-1 thermoresistant glucokinase family carbohydrate kinase YP_004108063.1 1831855 R 652103 CDS YP_004108064.1 316933082 10063915 complement(1832387..1833127) 1 NC_014834.1 KEGG: bja:blr6761 putative 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; 6-phosphogluconolactonase 1833127 10063915 Rpdx1_1714 Rhodopseudomonas palustris DX-1 6-phosphogluconolactonase YP_004108064.1 1832387 R 652103 CDS YP_004108065.1 316933083 10063916 complement(1833131..1834645) 1 NC_014834.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: bbt:BBta_6317 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1834645 10063916 Rpdx1_1715 Rhodopseudomonas palustris DX-1 glucose-6-phosphate 1-dehydrogenase YP_004108065.1 1833131 R 652103 CDS YP_004108066.1 316933084 10063917 complement(1834642..1835682) 1 NC_014834.1 KEGG: bbt:BBta_6316 6-phosphogluconate dehydrogenase-like protein; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase 1835682 10063917 Rpdx1_1716 Rhodopseudomonas palustris DX-1 6-phosphogluconate dehydrogenase YP_004108066.1 1834642 R 652103 CDS YP_004108067.1 316933085 10063918 complement(1835870..1838722) 1 NC_014834.1 KEGG: bja:blr6758 bifunctional transaldolase/phosoglucose isomerase; TIGRFAM: transaldolase; PFAM: Transaldolase; phosphoglucose isomerase (PGI); transaldolase 1838722 10063918 Rpdx1_1717 Rhodopseudomonas palustris DX-1 transaldolase YP_004108067.1 1835870 R 652103 CDS YP_004108068.1 316933086 10063919 complement(1838958..1839956) 1 NC_014834.1 KEGG: bbt:BBta_6305 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 1839956 10063919 Rpdx1_1718 Rhodopseudomonas palustris DX-1 proline iminopeptidase YP_004108068.1 1838958 R 652103 CDS YP_004108069.1 316933087 10063920 1840059..1840337 1 NC_014834.1 KEGG: nha:Nham_3268 hypothetical protein; hypothetical protein 1840337 10063920 Rpdx1_1719 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108069.1 1840059 D 652103 CDS YP_004108070.1 316933088 10063921 1840409..1841806 1 NC_014834.1 PFAM: Amidase; KEGG: bja:bll6733 amidase; amidase 1841806 10063921 Rpdx1_1720 Rhodopseudomonas palustris DX-1 amidase YP_004108070.1 1840409 D 652103 CDS YP_004108071.1 316933089 10063922 1841825..1842301 1 NC_014834.1 KEGG: bra:BRADO5788 glutathione peroxidase; PFAM: glutathione peroxidase; peroxiredoxin 1842301 10063922 Rpdx1_1721 Rhodopseudomonas palustris DX-1 peroxiredoxin YP_004108071.1 1841825 D 652103 CDS YP_004108072.1 316933090 10063923 1842298..1842552 1 NC_014834.1 PFAM: Protein of unknown function DUF3297; KEGG: bra:BRADO5787 hypothetical protein; hypothetical protein 1842552 10063923 Rpdx1_1722 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108072.1 1842298 D 652103 CDS YP_004108073.1 316933091 10063924 complement(1843393..1843734) 1 NC_014834.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: oca:OCAR_7056 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C domain-containing protein 1843734 10063924 Rpdx1_1723 Rhodopseudomonas palustris DX-1 excinuclease ABC subunit C domain-containing protein YP_004108073.1 1843393 R 652103 CDS YP_004108074.1 316933092 10063925 1843849..1844235 1 NC_014834.1 KEGG: nha:Nham_2920 hypothetical protein; hypothetical protein 1844235 10063925 Rpdx1_1724 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108074.1 1843849 D 652103 CDS YP_004108075.1 316933093 10063926 1844386..1845315 1 NC_014834.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bra:BRADO5762 putative gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 1845315 10063926 Rpdx1_1725 Rhodopseudomonas palustris DX-1 SMP-30/gluconolaconase/LRE domain-containing protein YP_004108075.1 1844386 D 652103 CDS YP_004108076.1 316933094 10063927 1845467..1846063 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_2919 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1846063 10063927 Rpdx1_1726 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004108076.1 1845467 D 652103 CDS YP_004108077.1 316933095 10063928 1846203..1846487 1 NC_014834.1 KEGG: nfi:NFIA_062490 cytochrome P450 monooxygenase (Fum15), putative; hypothetical protein 1846487 10063928 Rpdx1_1727 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108077.1 1846203 D 652103 CDS YP_004108078.1 316933096 10063929 complement(1846559..1847551) 1 NC_014834.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bja:blr2392 putative dioxygenase subunit; ferredoxin 1847551 10063929 Rpdx1_1728 Rhodopseudomonas palustris DX-1 ferredoxin YP_004108078.1 1846559 R 652103 CDS YP_004108079.1 316933097 10063930 complement(1847583..1848338) 1 NC_014834.1 KEGG: bja:blr2391 transcriptional regulatory protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1848338 10063930 Rpdx1_1729 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004108079.1 1847583 R 652103 CDS YP_004108080.1 316933098 10063931 complement(1848342..1849385) 1 NC_014834.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bja:blr2390 vanillate O-demethylase oxygenase subunit; Rieske (2Fe-2S) iron-sulfur domain 1849385 10063931 Rpdx1_1730 Rhodopseudomonas palustris DX-1 Rieske (2Fe-2S) iron-sulfur domain YP_004108080.1 1848342 R 652103 CDS YP_004108081.1 316933099 10063932 1849579..1850733 1 NC_014834.1 PFAM: Protein of unknown function DUF1963; KEGG: btk:BT9727_1822 hypothetical protein; hypothetical protein 1850733 10063932 Rpdx1_1731 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108081.1 1849579 D 652103 CDS YP_004108082.1 316933100 10063933 complement(1850837..1851679) 1 NC_014834.1 KEGG: bbt:BBta_6260 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase 1851679 10063933 Rpdx1_1732 Rhodopseudomonas palustris DX-1 ATPase YP_004108082.1 1850837 R 652103 CDS YP_004108083.1 316933101 10063934 complement(1851797..1852051) 1 NC_014834.1 PFAM: Transglycosylase-associated protein; KEGG: nha:Nham_2918 transglycosylase-associated protein; transglycosylase-associated protein 1852051 10063934 Rpdx1_1733 Rhodopseudomonas palustris DX-1 transglycosylase-associated protein YP_004108083.1 1851797 R 652103 CDS YP_004108084.1 316933102 10063935 complement(1852239..1854176) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: bja:bll1362 hypothetical protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor -containing diguanylate cyclase 1854176 10063935 Rpdx1_1734 Rhodopseudomonas palustris DX-1 PAS/PAC sensor -containing diguanylate cyclase YP_004108084.1 1852239 R 652103 CDS YP_004108085.1 316933103 10063936 1854344..1855519 1 NC_014834.1 KEGG: bra:BRADO5746 hypothetical protein; hypothetical protein 1855519 10063936 Rpdx1_1735 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108085.1 1854344 D 652103 CDS YP_004108086.1 316933104 10063937 1855663..1856073 1 NC_014834.1 KEGG: bbt:BBta_6257 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 1856073 10063937 Rpdx1_1736 Rhodopseudomonas palustris DX-1 rhodanese domain-containing protein YP_004108086.1 1855663 D 652103 CDS YP_004108087.1 316933105 10063938 1856266..1857123 1 NC_014834.1 KEGG: nha:Nham_2916 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 1857123 10063938 Rpdx1_1737 Rhodopseudomonas palustris DX-1 rhodanese domain-containing protein YP_004108087.1 1856266 D 652103 CDS YP_004108088.1 316933106 10063939 complement(1857133..1858113) 1 NC_014834.1 KEGG: nwi:Nwi_2489 hypothetical protein; hypothetical protein 1858113 10063939 Rpdx1_1738 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108088.1 1857133 R 652103 CDS YP_004108089.1 316933107 10063940 1858537..1859700 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:bll6688 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1859700 10063940 Rpdx1_1739 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004108089.1 1858537 D 652103 CDS YP_004108090.1 316933108 10063941 complement(1859787..1859990) 1 NC_014834.1 KEGG: bja:bsr6686 hypothetical protein; hypothetical protein 1859990 10063941 Rpdx1_1740 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108090.1 1859787 R 652103 CDS YP_004108091.1 316933109 10063942 complement(1860157..1862556) 1 NC_014834.1 KEGG: gsu:GSU0709 hypothetical protein; manually curated; PFAM: KAP P-loop domain protein; KAP P-loop domain-containing protein 1862556 10063942 Rpdx1_1741 Rhodopseudomonas palustris DX-1 KAP P-loop domain-containing protein YP_004108091.1 1860157 R 652103 CDS YP_004108092.1 316933110 10063943 1862656..1864305 1 NC_014834.1 KEGG: bbt:BBta_6251 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1864305 10063943 Rpdx1_1742 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108092.1 1862656 D 652103 CDS YP_004108093.1 316933111 10063944 complement(1864316..1864714) 1 NC_014834.1 PFAM: PilT protein domain protein; KEGG: rhi:NGR_b23580 putative nucleic acid-binding protein; PilT domain-containing protein 1864714 10063944 Rpdx1_1743 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004108093.1 1864316 R 652103 CDS YP_004108094.1 316933112 10063945 complement(1864711..1864965) 1 NC_014834.1 KEGG: sme:SMc02658 hypothetical protein; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator 1864965 10063945 Rpdx1_1744 Rhodopseudomonas palustris DX-1 AbrB family transcriptional regulator YP_004108094.1 1864711 R 652103 CDS YP_004108095.1 316933113 10063946 1865129..1865899 1 NC_014834.1 KEGG: nha:Nham_2909 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 11; trans-aconitate 2-methyltransferase 1865899 10063946 Rpdx1_1745 Rhodopseudomonas palustris DX-1 trans-aconitate 2-methyltransferase YP_004108095.1 1865129 D 652103 CDS YP_004108096.1 316933114 10063947 1866076..1866666 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: oca:OCAR_7046 hypothetical protein; hypothetical protein 1866666 10063947 Rpdx1_1746 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108096.1 1866076 D 652103 CDS YP_004108097.1 316933115 10063948 1866663..1867910 1 NC_014834.1 KEGG: bja:bll6684 transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; lytic murein transglycosylase 1867910 10063948 Rpdx1_1747 Rhodopseudomonas palustris DX-1 lytic murein transglycosylase YP_004108097.1 1866663 D 652103 CDS YP_004108098.1 316933116 10063949 complement(1867986..1868270) 1 NC_014834.1 KEGG: nha:Nham_2906 hypothetical protein; hypothetical protein 1868270 10063949 Rpdx1_1748 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108098.1 1867986 R 652103 CDS YP_004108099.1 316933117 10063950 complement(1868492..1868836) 1 NC_014834.1 KEGG: bja:blr6682 hypothetical protein; hypothetical protein 1868836 10063950 Rpdx1_1749 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108099.1 1868492 R 652103 CDS YP_004108100.1 316933118 10063951 1869213..1869413 1 NC_014834.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: bbt:BBta_6243 putative bacterioferritin-associated ferredoxin; BFD domain-containing /(2Fe-2S)-binding domain-containing protein 1869413 10063951 Rpdx1_1750 Rhodopseudomonas palustris DX-1 BFD domain-containing /(2Fe-2S)-binding domain-containing protein YP_004108100.1 1869213 D 652103 CDS YP_004108101.1 316933119 10063952 1869544..1870023 1 NC_014834.1 KEGG: xau:Xaut_3765 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; bacterioferritin 1870023 10063952 Rpdx1_1751 Rhodopseudomonas palustris DX-1 bacterioferritin YP_004108101.1 1869544 D 652103 CDS YP_004108102.1 316933120 10063953 complement(1870064..1870606) 1 NC_014834.1 KEGG: geo:Geob_1855 hypothetical protein; hypothetical protein 1870606 10063953 Rpdx1_1752 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108102.1 1870064 R 652103 CDS YP_004108103.1 316933121 10063954 complement(1870746..1872449) 1 NC_014834.1 KEGG: bbt:BBta_2901 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1872449 10063954 Rpdx1_1753 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004108103.1 1870746 R 652103 CDS YP_004108104.1 316933122 10063956 complement(1873378..1874007) 1 NC_014834.1 PFAM: SOUL heme-binding protein; KEGG: mrd:Mrad2831_4266 SOUL heme-binding protein; SOUL heme-binding protein 1874007 10063956 Rpdx1_1755 Rhodopseudomonas palustris DX-1 SOUL heme-binding protein YP_004108104.1 1873378 R 652103 CDS YP_004108105.1 316933123 10063957 complement(1874164..1874415) 1 NC_014834.1 manually curated; KEGG: bbt:BBta_6234 putative collagen-like protein; putative collagen-like protein 1874415 10063957 Rpdx1_1756 Rhodopseudomonas palustris DX-1 putative collagen-like protein YP_004108105.1 1874164 R 652103 CDS YP_004108106.1 316933124 10063958 complement(1874887..1875966) 1 NC_014834.1 KEGG: rrs:RoseRS_3378 protein kinase; hypothetical protein 1875966 10063958 Rpdx1_1757 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108106.1 1874887 R 652103 CDS YP_004108107.1 316933125 10063959 1876328..1876927 1 NC_014834.1 KEGG: sro:Sros_5931 hypothetical protein; hypothetical protein 1876927 10063959 Rpdx1_1758 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108107.1 1876328 D 652103 CDS YP_004108108.1 316933126 10063960 complement(1877068..1878018) 1 NC_014834.1 KEGG: nwi:Nwi_2469 hypothetical protein; hypothetical protein 1878018 10063960 Rpdx1_1759 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108108.1 1877068 R 652103 CDS YP_004108109.1 316933127 10063961 1878210..1878638 1 NC_014834.1 KEGG: nha:Nham_2898 hypothetical protein; hypothetical protein 1878638 10063961 Rpdx1_1760 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108109.1 1878210 D 652103 CDS YP_004108110.1 316933128 10063962 complement(1878631..1879182) 1 NC_014834.1 KEGG: bvi:Bcep1808_5397 L-carnitine dehydratase/bile acid-inducible protein F; hypothetical protein 1879182 10063962 Rpdx1_1761 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108110.1 1878631 R 652103 CDS YP_004108111.1 316933129 10063963 1879478..1880770 1 NC_014834.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bbt:BBta_7587 hypothetical protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 1880770 10063963 Rpdx1_1762 Rhodopseudomonas palustris DX-1 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004108111.1 1879478 D 652103 CDS YP_004108112.1 316933130 10063964 complement(1880788..1880976) 1 NC_014834.1 hypothetical protein 1880976 10063964 Rpdx1_1763 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108112.1 1880788 R 652103 CDS YP_004108113.1 316933131 10063965 complement(1881157..1881441) 1 NC_014834.1 KEGG: bcy:Bcer98_0238 alanine racemase; hypothetical protein 1881441 10063965 Rpdx1_1764 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108113.1 1881157 R 652103 CDS YP_004108114.1 316933132 10063966 complement(1881603..1883081) 1 NC_014834.1 KEGG: saq:Sare_0277 amino acid permease-associated region; hypothetical protein 1883081 10063966 Rpdx1_1765 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108114.1 1881603 R 652103 CDS YP_004108115.1 316933133 10063967 1883299..1884066 1 NC_014834.1 KEGG: met:M446_2033 methyltransferase type 11; type 11 methyltransferase 1884066 10063967 Rpdx1_1766 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004108115.1 1883299 D 652103 CDS YP_004108116.1 316933134 10063968 1884288..1884800 1 NC_014834.1 KEGG: dal:Dalk_1505 von Willebrand factor type A; hypothetical protein 1884800 10063968 Rpdx1_1767 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108116.1 1884288 D 652103 CDS YP_004108117.1 316933135 10063969 1884864..1885394 1 NC_014834.1 KEGG: psa:PST_1052 transposase and inactivated derivative; transposase-like protein 1885394 10063969 Rpdx1_1768 Rhodopseudomonas palustris DX-1 transposase-like protein YP_004108117.1 1884864 D 652103 CDS YP_004108118.1 316933136 10063970 1885515..1885748 1 NC_014834.1 KEGG: rlg:Rleg_2764 hypothetical protein; hypothetical protein 1885748 10063970 Rpdx1_1769 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108118.1 1885515 D 652103 CDS YP_004108119.1 316933137 10063972 1886665..1887003 1 NC_014834.1 PFAM: Protein of unknown function DUF1778; KEGG: bid:Bind_1482 hypothetical protein; hypothetical protein 1887003 10063972 Rpdx1_1771 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108119.1 1886665 D 652103 CDS YP_004108120.1 316933138 10063973 1886991..1887524 1 NC_014834.1 manually curated; KEGG: mpo:Mpop_1352 hypothetical protein; hypothetical protein 1887524 10063973 Rpdx1_1772 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108120.1 1886991 D 652103 CDS YP_004108121.1 316933139 10063974 1887829..1888227 1 NC_014834.1 PFAM: protein of unknown function DUF1486; KEGG: bph:Bphy_5476 hypothetical protein; hypothetical protein 1888227 10063974 Rpdx1_1773 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108121.1 1887829 D 652103 CDS YP_004108122.1 316933140 10063975 complement(1889458..1890234) 1 NC_014834.1 KEGG: pbe:PB000972.03.0 hypothetical protein; hypothetical protein 1890234 10063975 Rpdx1_1774 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108122.1 1889458 R 652103 CDS YP_004108123.1 316933141 10063976 1890478..1890897 1 NC_014834.1 manually curated; KEGG: bja:bll7219 hypothetical protein; hypothetical protein 1890897 10063976 Rpdx1_1775 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108123.1 1890478 D 652103 CDS YP_004108124.1 316933142 10063978 complement(1891635..1893635) 1 NC_014834.1 KEGG: bbt:BBta_6226 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 1893635 10063978 Rpdx1_1777 Rhodopseudomonas palustris DX-1 thiamine biosynthesis protein ThiC YP_004108124.1 1891635 R 652103 CDS YP_004108125.1 316933143 10063979 complement(1893786..1894394) 1 NC_014834.1 KEGG: nwi:Nwi_2467 thiamine monophosphate synthase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 1894394 10063979 Rpdx1_1778 Rhodopseudomonas palustris DX-1 thiamine-phosphate pyrophosphorylase YP_004108125.1 1893786 R 652103 CDS YP_004108126.1 316933144 10063980 complement(1894381..1895163) 1 NC_014834.1 PFAM: thiazole biosynthesis family protein; KEGG: bbt:BBta_6224 thiazole synthase; thiazole biosynthesis family protein 1895163 10063980 Rpdx1_1779 Rhodopseudomonas palustris DX-1 thiazole biosynthesis family protein YP_004108126.1 1894381 R 652103 CDS YP_004108127.1 316933145 10063982 complement(1895513..1895710) 1 NC_014834.1 KEGG: bbt:BBta_6223 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS 1895710 10063982 Rpdx1_1781 Rhodopseudomonas palustris DX-1 thiamine biosynthesis protein ThiS YP_004108127.1 1895513 R 652103 CDS YP_004108128.1 316933146 10063983 complement(1895701..1896822) 1 NC_014834.1 PFAM: FAD dependent oxidoreductase; KEGG: bja:blr6655 thiamine biosynthesis oxidoreductase; FAD dependent oxidoreductase 1896822 10063983 Rpdx1_1782 Rhodopseudomonas palustris DX-1 FAD dependent oxidoreductase YP_004108128.1 1895701 R 652103 CDS YP_004108129.1 316933147 10063984 complement(1897051..1898388) 1 NC_014834.1 KEGG: bbt:BBta_6217 putative two component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 1898388 10063984 Rpdx1_1783 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004108129.1 1897051 R 652103 CDS YP_004108130.1 316933148 10063985 complement(1898385..1899107) 1 NC_014834.1 KEGG: bbt:BBta_6216 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 1899107 10063985 Rpdx1_1784 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004108130.1 1898385 R 652103 CDS YP_004108131.1 316933149 10063986 1899272..1899826 1 NC_014834.1 KEGG: bja:bll6650 hypothetical protein; hypothetical protein 1899826 10063986 Rpdx1_1785 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108131.1 1899272 D 652103 CDS YP_004108132.1 316933150 10063987 1900122..1900673 1 NC_014834.1 PFAM: PRC-barrel domain protein; KEGG: bbt:BBta_6218 hypothetical protein; PRC-barrel domain-containing protein 1900673 10063987 Rpdx1_1786 Rhodopseudomonas palustris DX-1 PRC-barrel domain-containing protein YP_004108132.1 1900122 D 652103 CDS YP_004108133.1 316933151 10063988 complement(1900796..1902358) 1 NC_014834.1 KEGG: nha:Nham_2886 hypothetical protein; hypothetical protein 1902358 10063988 Rpdx1_1787 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108133.1 1900796 R 652103 CDS YP_004108134.1 316933152 10063989 complement(1902515..1902853) 1 NC_014834.1 KEGG: stp:Strop_3754 peptidase S8/S53 subtilisin kexin sedolisin; hypothetical protein 1902853 10063989 Rpdx1_1788 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108134.1 1902515 R 652103 CDS YP_004108135.1 316933153 10063990 complement(1903041..1903757) 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr6636 ATP synthase subunit; ErfK/YbiS/YcfS/YnhG family protein 1903757 10063990 Rpdx1_1789 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004108135.1 1903041 R 652103 CDS YP_004108136.1 316933154 10063991 1904027..1905475 1 NC_014834.1 KEGG: tmz:Tmz1t_1789 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; tryptophanase 1905475 10063991 Rpdx1_1790 Rhodopseudomonas palustris DX-1 tryptophanase YP_004108136.1 1904027 D 652103 CDS YP_004108137.1 316933155 10063992 1905704..1905904 1 NC_014834.1 KEGG: bbt:BBta_2412 hypothetical protein; hypothetical protein 1905904 10063992 Rpdx1_1791 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108137.1 1905704 D 652103 CDS YP_004108138.1 316933156 10063993 complement(1905964..1906812) 1 NC_014834.1 PFAM: Methyltransferase type 11; KEGG: sus:Acid_4410 arsenite S-adenosylmethyltransferase; type 11 methyltransferase 1906812 10063993 Rpdx1_1792 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004108138.1 1905964 R 652103 CDS YP_004108139.1 316933157 10063994 complement(1906802..1907158) 1 NC_014834.1 KEGG: sus:Acid_4411 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein Crp; regulatory protein ArsR 1907158 10063994 Rpdx1_1793 Rhodopseudomonas palustris DX-1 regulatory protein ArsR YP_004108139.1 1906802 R 652103 CDS YP_004108140.1 316933158 10063995 1907255..1907554 1 NC_014834.1 KEGG: xau:Xaut_3418 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 1907554 10063995 Rpdx1_1794 Rhodopseudomonas palustris DX-1 regulatory protein ArsR YP_004108140.1 1907255 D 652103 CDS YP_004108141.1 316933159 10063996 1907551..1908600 1 NC_014834.1 PFAM: permease; KEGG: xau:Xaut_3419 permease; permease 1908600 10063996 Rpdx1_1795 Rhodopseudomonas palustris DX-1 permease YP_004108141.1 1907551 D 652103 CDS YP_004108142.1 316933160 10063997 1908613..1908849 1 NC_014834.1 KEGG: xau:Xaut_3943 thiol-disulfide isomerase and thioredoxin; thiol-disulfide isomerase and thioredoxin 1908849 10063997 Rpdx1_1796 Rhodopseudomonas palustris DX-1 thiol-disulfide isomerase and thioredoxin YP_004108142.1 1908613 D 652103 CDS YP_004108143.1 316933161 10063998 1908904..1909260 1 NC_014834.1 SMART: regulatory protein ArsR; KEGG: oca:OCAR_4233 transcriptional regulator, ArsR family; regulatory protein ArsR 1909260 10063998 Rpdx1_1797 Rhodopseudomonas palustris DX-1 regulatory protein ArsR YP_004108143.1 1908904 D 652103 CDS YP_004108144.1 316933162 10063999 1909253..1909780 1 NC_014834.1 KEGG: oca:OCAR_7747 transcriptional regulator, ArsR family; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein-tyrosine phosphatase, low molecular weight 1909780 10063999 Rpdx1_1798 Rhodopseudomonas palustris DX-1 protein-tyrosine phosphatase, low molecular weight YP_004108144.1 1909253 D 652103 CDS YP_004108145.1 316933163 10064000 1909780..1910205 1 NC_014834.1 KEGG: oca:OCAR_4231 arsenate reductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase 1910205 10064000 Rpdx1_1799 Rhodopseudomonas palustris DX-1 arsenate reductase YP_004108145.1 1909780 D 652103 CDS YP_004108146.1 316933164 10064001 1910452..1911504 1 NC_014834.1 KEGG: oca:OCAR_4230 arsenical-resistance protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; arsenical-resistance protein 1911504 10064001 Rpdx1_1800 Rhodopseudomonas palustris DX-1 arsenical-resistance protein YP_004108146.1 1910452 D 652103 CDS YP_004108147.1 316933165 10064002 complement(1911516..1912337) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: azl:AZL_b01550 3-oxoacyl-[acyl-carrier-protein] reductase; short-chain dehydrogenase/reductase SDR 1912337 10064002 Rpdx1_1801 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004108147.1 1911516 R 652103 CDS YP_004108148.1 316933166 10064003 complement(1912334..1913053) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sus:Acid_2708 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1913053 10064003 Rpdx1_1802 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004108148.1 1912334 R 652103 CDS YP_004108149.1 316933167 10064004 complement(1913050..1914948) 1 NC_014834.1 KEGG: dol:Dole_1742 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 1914948 10064004 Rpdx1_1803 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004108149.1 1913050 R 652103 CDS YP_004108150.1 316933168 10064005 complement(1915250..1915888) 1 NC_014834.1 KEGG: bja:bll0962 phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 1915888 10064005 Rpdx1_1804 Rhodopseudomonas palustris DX-1 HAD-superfamily hydrolase YP_004108150.1 1915250 R 652103 CDS YP_004108151.1 316933169 10064006 1916065..1919532 1 NC_014834.1 KEGG: nha:Nham_3087 outer membrane autotransporter barrel; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; polymorphic outer membrane protein; PFAM: Autotransporter beta- domain protein; outer membrane autotransporter barrel domain-containing protein 1919532 10064006 Rpdx1_1805 Rhodopseudomonas palustris DX-1 outer membrane autotransporter barrel domain-containing protein YP_004108151.1 1916065 D 652103 CDS YP_004108152.1 316933170 10064007 complement(1919570..1919809) 1 NC_014834.1 KEGG: mdo:100013455 similar to organic anion transporter 4; hypothetical protein 1919809 10064007 Rpdx1_1806 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108152.1 1919570 R 652103 CDS YP_004108153.1 316933171 10064008 1920004..1921959 1 NC_014834.1 KEGG: bra:BRADO0729 putative methyl-accepting chemotaxis protein (chemoreceptor); PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1921959 10064008 Rpdx1_1807 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004108153.1 1920004 D 652103 CDS YP_004108154.1 316933172 10064009 1922084..1923313 1 NC_014834.1 PFAM: Extensin family protein; KEGG: bja:bll6625 hypothetical protein; extensin family protein 1923313 10064009 Rpdx1_1808 Rhodopseudomonas palustris DX-1 extensin family protein YP_004108154.1 1922084 D 652103 CDS YP_004108155.1 316933173 10064010 complement(1923314..1923961) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bja:blr6623 transcriptional regulatory protein; regulatory protein TetR 1923961 10064010 Rpdx1_1809 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004108155.1 1923314 R 652103 CDS YP_004108156.1 316933174 10064011 1924141..1925406 1 NC_014834.1 PFAM: secretion protein HlyD family protein; KEGG: bbt:BBta_6188 putative multidrug resistance protein A; secretion protein HlyD family protein 1925406 10064011 Rpdx1_1810 Rhodopseudomonas palustris DX-1 secretion protein HlyD family protein YP_004108156.1 1924141 D 652103 CDS YP_004108157.1 316933175 10064012 1925559..1927154 1 NC_014834.1 KEGG: bbt:BBta_6187 putative multidrug resistance protein B; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 1927154 10064012 Rpdx1_1811 Rhodopseudomonas palustris DX-1 EmrB/QacA subfamily drug resistance transporter YP_004108157.1 1925559 D 652103 CDS YP_004108158.1 316933176 10064013 complement(1927162..1928571) 1 NC_014834.1 KEGG: gme:Gmet_2012 polysaccharide biosynthesis protein; hypothetical protein 1928571 10064013 Rpdx1_1812 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108158.1 1927162 R 652103 CDS YP_004108159.1 316933177 10064015 complement(1929153..1930019) 1 NC_014834.1 KEGG: bja:blr6611 amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; Peptidoglycan-binding domain 1 protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1930019 10064015 Rpdx1_1813 Rhodopseudomonas palustris DX-1 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_004108159.1 1929153 R 652103 CDS YP_004108160.1 316933178 10064016 1930513..1931511 1 NC_014834.1 KEGG: bbt:BBta_6182 S-adenosyl-dependent methyl transferase; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW 1931511 10064016 Rpdx1_1814 Rhodopseudomonas palustris DX-1 S-adenosyl-methyltransferase MraW YP_004108160.1 1930513 D 652103 CDS YP_004108161.1 316933179 10064017 1931508..1931891 1 NC_014834.1 KEGG: nwi:Nwi_1044 hypothetical protein; hypothetical protein 1931891 10064017 Rpdx1_1815 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108161.1 1931508 D 652103 CDS YP_004108162.1 316933180 10064018 1931888..1933642 1 NC_014834.1 KEGG: nha:Nham_1273 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; peptidoglycan glycosyltransferase 1933642 10064018 Rpdx1_1816 Rhodopseudomonas palustris DX-1 peptidoglycan glycosyltransferase YP_004108162.1 1931888 D 652103 CDS YP_004108163.1 316933181 10064019 1933756..1935213 1 NC_014834.1 KEGG: nha:Nham_1274 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramyl tripeptide synthetase 1935213 10064019 Rpdx1_1817 Rhodopseudomonas palustris DX-1 UDP-N-acetylmuramyl tripeptide synthetase YP_004108163.1 1933756 D 652103 CDS YP_004108164.1 316933182 10064020 1935210..1936649 1 NC_014834.1 KEGG: nha:Nham_1275 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 1936649 10064020 Rpdx1_1818 Rhodopseudomonas palustris DX-1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_004108164.1 1935210 D 652103 CDS YP_004108165.1 316933183 10064021 1936660..1937745 1 NC_014834.1 KEGG: nha:Nham_1276 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase 1937745 10064021 Rpdx1_1819 Rhodopseudomonas palustris DX-1 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_004108165.1 1936660 D 652103 CDS YP_004108166.1 316933184 10064022 1937897..1939294 1 NC_014834.1 KEGG: nha:Nham_1277 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1939294 10064022 Rpdx1_1820 Rhodopseudomonas palustris DX-1 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004108166.1 1937897 D 652103 CDS YP_004108167.1 316933185 10064023 1939540..1940682 1 NC_014834.1 KEGG: bja:bll6603 cell division protein; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; cell division protein FtsW 1940682 10064023 Rpdx1_1821 Rhodopseudomonas palustris DX-1 cell division protein FtsW YP_004108167.1 1939540 D 652103 CDS YP_004108168.1 316933186 10064024 1940687..1941787 1 NC_014834.1 KEGG: nwi:Nwi_1051 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 1941787 10064024 Rpdx1_1822 Rhodopseudomonas palustris DX-1 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_004108168.1 1940687 D 652103 CDS YP_004108169.1 316933187 10064025 1941923..1943329 1 NC_014834.1 KEGG: nha:Nham_1280 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; UDP-N-acetylmuramate--L-alanine ligase 1943329 10064025 Rpdx1_1823 Rhodopseudomonas palustris DX-1 UDP-N-acetylmuramate--L-alanine ligase YP_004108169.1 1941923 D 652103 CDS YP_004108170.1 316933188 10064026 1943346..1943825 1 NC_014834.1 KEGG: cyc:PCC7424_4025 hypothetical protein; hypothetical protein 1943825 10064026 Rpdx1_1824 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108170.1 1943346 D 652103 CDS YP_004108171.1 316933189 10064027 1943813..1944751 1 NC_014834.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: nwi:Nwi_1054 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 1944751 10064027 Rpdx1_1825 Rhodopseudomonas palustris DX-1 UDP-N-acetylenolpyruvoylglucosamine reductase YP_004108171.1 1943813 D 652103 CDS YP_004108172.1 316933190 10064028 complement(1944892..1945713) 1 NC_014834.1 KEGG: oca:OCAR_5246 hypothetical protein; hypothetical protein 1945713 10064028 Rpdx1_1826 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108172.1 1944892 R 652103 CDS YP_004108173.1 316933191 10064029 1945947..1947275 1 NC_014834.1 KEGG: mxa:MXAN_0277 hypothetical protein; hypothetical protein 1947275 10064029 Rpdx1_1827 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108173.1 1945947 D 652103 CDS YP_004108174.1 316933192 10064030 1947382..1948371 1 NC_014834.1 KEGG: nwi:Nwi_1055 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 1948371 10064030 Rpdx1_1828 Rhodopseudomonas palustris DX-1 D-alanine--D-alanine ligase YP_004108174.1 1947382 D 652103 CDS YP_004108175.1 316933193 10064032 1948689..1949678 1 NC_014834.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: bja:bll6598 putative cell division protein; cell division protein FtsQ 1949678 10064032 Rpdx1_1830 Rhodopseudomonas palustris DX-1 cell division protein FtsQ YP_004108175.1 1948689 D 652103 CDS YP_004108176.1 316933194 10064033 1949675..1950997 1 NC_014834.1 KEGG: bra:BRADO5654 cell division protein ATPase; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; cell division protein FtsA 1950997 10064033 Rpdx1_1831 Rhodopseudomonas palustris DX-1 cell division protein FtsA YP_004108176.1 1949675 D 652103 CDS YP_004108177.1 316933195 10064034 1951091..1952869 1 NC_014834.1 KEGG: nha:Nham_1286 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ 1952869 10064034 Rpdx1_1832 Rhodopseudomonas palustris DX-1 cell division protein FtsZ YP_004108177.1 1951091 D 652103 CDS YP_004108178.1 316933196 10064035 1953216..1954178 1 NC_014834.1 KEGG: bja:bll6595 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-0-acyl N-acetylglucosamine deacetylase 1954178 10064035 Rpdx1_1833 Rhodopseudomonas palustris DX-1 UDP-3-0-acyl N-acetylglucosamine deacetylase YP_004108178.1 1953216 D 652103 CDS YP_004108179.1 316933197 10064036 1954408..1955316 1 NC_014834.1 KEGG: bbt:BBta_6164 hypothetical protein; manually curated; TIGRFAM: outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein YfiO 1955316 10064036 Rpdx1_1834 Rhodopseudomonas palustris DX-1 outer membrane assembly lipoprotein YfiO YP_004108179.1 1954408 D 652103 CDS YP_004108180.1 316933198 10064037 1955329..1957014 1 NC_014834.1 KEGG: nha:Nham_1289 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN 1957014 10064037 Rpdx1_1835 Rhodopseudomonas palustris DX-1 DNA repair protein RecN YP_004108180.1 1955329 D 652103 CDS YP_004108181.1 316933199 10064038 complement(1957187..1957474) 1 NC_014834.1 KEGG: bja:bsr6592 hypothetical protein; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; excinuclease ABC subunit C domain-containing protein 1957474 10064038 Rpdx1_1836 Rhodopseudomonas palustris DX-1 excinuclease ABC subunit C domain-containing protein YP_004108181.1 1957187 R 652103 CDS YP_004108182.1 316933200 10064039 1957620..1959767 1 NC_014834.1 SMART: NAD-dependent DNA ligase ; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: nha:Nham_1290 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; BRCT domain protein; NAD-dependent DNA ligase 1959767 10064039 Rpdx1_1837 Rhodopseudomonas palustris DX-1 NAD-dependent DNA ligase YP_004108182.1 1957620 D 652103 CDS YP_004108183.1 316933201 10064040 complement(1959897..1961186) 1 NC_014834.1 KEGG: bja:blr6590 major facilitator superfamily transporter; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter 1961186 10064040 Rpdx1_1838 Rhodopseudomonas palustris DX-1 Bcr/CflA subfamily drug resistance transporter YP_004108183.1 1959897 R 652103 CDS YP_004108184.1 316933202 10064041 complement(1961564..1963393) 1 NC_014834.1 PFAM: peptidase M24; creatinase; KEGG: bbt:BBta_6160 putative aminopeptidase P; peptidase M24 1963393 10064041 Rpdx1_1839 Rhodopseudomonas palustris DX-1 peptidase M24 YP_004108184.1 1961564 R 652103 CDS YP_004108185.1 316933203 10064042 1963590..1963784 1 NC_014834.1 KEGG: bra:BRADO5645 hypothetical protein; hypothetical protein 1963784 10064042 Rpdx1_1840 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108185.1 1963590 D 652103 CDS YP_004108186.1 316933204 10064043 complement(1963809..1964792) 1 NC_014834.1 PFAM: ribosomal L11 methyltransferase; KEGG: nha:Nham_2746 ribosomal L11 methyltransferase; ribosomal L11 methyltransferase 1964792 10064043 Rpdx1_1841 Rhodopseudomonas palustris DX-1 ribosomal L11 methyltransferase YP_004108186.1 1963809 R 652103 CDS YP_004108187.1 316933205 10064044 1965161..1965463 1 NC_014834.1 KEGG: sgr:SGR_3600 hypothetical protein; hypothetical protein 1965463 10064044 Rpdx1_1842 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108187.1 1965161 D 652103 CDS YP_004108188.1 316933206 10064045 complement(1965532..1967142) 1 NC_014834.1 PFAM: FAD dependent oxidoreductase; KEGG: bja:blr6586 phytoene dehydrogenase; FAD dependent oxidoreductase 1967142 10064045 Rpdx1_1843 Rhodopseudomonas palustris DX-1 FAD dependent oxidoreductase YP_004108188.1 1965532 R 652103 CDS YP_004108189.1 316933207 10064046 1967216..1969582 1 NC_014834.1 KEGG: bra:BRADO5641 hypothetical protein; hypothetical protein 1969582 10064046 Rpdx1_1844 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108189.1 1967216 D 652103 CDS YP_004108190.1 316933208 10064047 complement(1969620..1970381) 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_2743 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 1970381 10064047 Rpdx1_1845 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004108190.1 1969620 R 652103 CDS YP_004108191.1 316933209 10064048 1970651..1970998 1 NC_014834.1 KEGG: bja:bll6580 hypothetical protein; hypothetical protein 1970998 10064048 Rpdx1_1846 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108191.1 1970651 D 652103 CDS YP_004108192.1 316933210 10064049 complement(1971099..1971860) 1 NC_014834.1 PFAM: ABC-2 type transporter; KEGG: nha:Nham_2741 hypothetical protein; ABC-2 type transporter 1971860 10064049 Rpdx1_1847 Rhodopseudomonas palustris DX-1 ABC-2 type transporter YP_004108192.1 1971099 R 652103 CDS YP_004108193.1 316933211 10064050 complement(1971863..1972783) 1 NC_014834.1 KEGG: bbt:BBta_6149 putative ABC transporter (ATP binding protein); PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 1972783 10064050 Rpdx1_1848 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108193.1 1971863 R 652103 CDS YP_004108194.1 316933212 10064051 complement(1973046..1973330) 1 NC_014834.1 PFAM: protein of unknown function UPF0150; KEGG: nha:Nham_0567 hypothetical protein; hypothetical protein 1973330 10064051 Rpdx1_1849 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108194.1 1973046 R 652103 CDS YP_004108195.1 316933213 10064052 complement(1973330..1975921) 1 NC_014834.1 PFAM: UvrD/REP helicase; KEGG: nha:Nham_2739 UvrD/REP helicase; UvrD/REP helicase 1975921 10064052 Rpdx1_1850 Rhodopseudomonas palustris DX-1 UvrD/REP helicase YP_004108195.1 1973330 R 652103 CDS YP_004108196.1 316933214 10064053 1976234..1976407 1 NC_014834.1 PFAM: protein of unknown function DUF1328; KEGG: bbt:BBta_6140 hypothetical protein; hypothetical protein 1976407 10064053 Rpdx1_1851 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108196.1 1976234 D 652103 CDS YP_004108197.1 316933215 10064054 complement(1976404..1976937) 1 NC_014834.1 KEGG: bra:BRADO5610 hypothetical protein; hypothetical protein 1976937 10064054 Rpdx1_1852 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108197.1 1976404 R 652103 CDS YP_004108198.1 316933216 10064055 1977004..1978431 1 NC_014834.1 PFAM: FAD linked oxidase domain protein; KEGG: bja:bll6558 oxidoreductase; FAD linked oxidase domain-containing protein 1978431 10064055 Rpdx1_1853 Rhodopseudomonas palustris DX-1 FAD linked oxidase domain-containing protein YP_004108198.1 1977004 D 652103 CDS YP_004108199.1 316933217 10064056 1978566..1982399 1 NC_014834.1 PFAM: AsmA family protein; KEGG: bja:bll6536 hypothetical protein; AsmA family protein 1982399 10064056 Rpdx1_1854 Rhodopseudomonas palustris DX-1 AsmA family protein YP_004108199.1 1978566 D 652103 CDS YP_004108200.1 316933218 10064057 complement(1982421..1982699) 1 NC_014834.1 KEGG: nha:Nham_2734 hypothetical protein; hypothetical protein 1982699 10064057 Rpdx1_1855 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108200.1 1982421 R 652103 CDS YP_004108201.1 316933219 10064058 complement(1982696..1982884) 1 NC_014834.1 manually curated; KEGG: bbt:BBta_6107 hypothetical protein; hypothetical protein 1982884 10064058 Rpdx1_1856 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108201.1 1982696 R 652103 CDS YP_004108202.1 316933220 10064059 complement(1983148..1984575) 1 NC_014834.1 KEGG: nha:Nham_2732 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like; class II fumarate hydratase 1984575 10064059 Rpdx1_1857 Rhodopseudomonas palustris DX-1 class II fumarate hydratase YP_004108202.1 1983148 R 652103 CDS YP_004108203.1 316933221 10064060 complement(1984686..1985222) 1 NC_014834.1 KEGG: bbt:BBta_6105 hypothetical protein; hypothetical protein 1985222 10064060 Rpdx1_1858 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108203.1 1984686 R 652103 CDS YP_004108204.1 316933222 10064062 1985936..1986535 1 NC_014834.1 PFAM: Chromate transporter; KEGG: bra:BRADO5582 putative chromate transport protein (ChrA-like); chromate transporter 1986535 10064062 Rpdx1_1859 Rhodopseudomonas palustris DX-1 chromate transporter YP_004108204.1 1985936 D 652103 CDS YP_004108205.1 316933223 10064063 1986532..1987062 1 NC_014834.1 PFAM: Chromate transporter; KEGG: bja:bll6516 putative transmembrane protein; chromate transporter 1987062 10064063 Rpdx1_1860 Rhodopseudomonas palustris DX-1 chromate transporter YP_004108205.1 1986532 D 652103 CDS YP_004108206.1 316933224 10064064 1987135..1987635 1 NC_014834.1 KEGG: bra:BRADO5580 hypothetical protein; hypothetical protein 1987635 10064064 Rpdx1_1861 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108206.1 1987135 D 652103 CDS YP_004108207.1 316933225 10064065 1987646..1989160 1 NC_014834.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: bja:bll6514 hypothetical protein; hypothetical protein 1989160 10064065 Rpdx1_1862 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108207.1 1987646 D 652103 CDS YP_004108208.1 316933226 10064066 1989266..1990273 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: bja:bll6513 hypothetical protein; hypothetical protein 1990273 10064066 Rpdx1_1863 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108208.1 1989266 D 652103 CDS YP_004108209.1 316933227 10064067 1990511..1991413 1 NC_014834.1 TIGRFAM: thymidylate synthase; KEGG: rsh:Rsph17029_2044 thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase 1991413 10064067 Rpdx1_1864 Rhodopseudomonas palustris DX-1 thymidylate synthase YP_004108209.1 1990511 D 652103 CDS YP_004108210.1 316933228 10064073 1997941..1998060 1 NC_014834.1 hypothetical protein 1998060 10064073 Rpdx1_1865 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108210.1 1997941 D 652103 CDS YP_004108211.1 316933229 10064074 1998060..1998587 1 NC_014834.1 KEGG: bja:bll6510 dihydrofolate reductase; PFAM: dihydrofolate reductase region; dihydrofolate reductase 1998587 10064074 Rpdx1_1866 Rhodopseudomonas palustris DX-1 dihydrofolate reductase YP_004108211.1 1998060 D 652103 CDS YP_004108212.1 316933230 10064075 1998732..1999880 1 NC_014834.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: oca:OCAR_5278 HflK protein; SMART: band 7 protein; HflK protein 1999880 10064075 Rpdx1_1867 Rhodopseudomonas palustris DX-1 HflK protein YP_004108212.1 1998732 D 652103 CDS YP_004108213.1 316933231 10064076 1999877..2000821 1 NC_014834.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: oca:OCAR_5279 HflC protein; SMART: band 7 protein; HflC protein 2000821 10064076 Rpdx1_1868 Rhodopseudomonas palustris DX-1 HflC protein YP_004108213.1 1999877 D 652103 CDS YP_004108214.1 316933232 10064077 2001087..2001287 1 NC_014834.1 PFAM: Protein of unknown function DUF2065; KEGG: bja:bsl6507 hypothetical protein; hypothetical protein 2001287 10064077 Rpdx1_1869 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108214.1 2001087 D 652103 CDS YP_004108215.1 316933233 10064078 2001696..2003198 1 NC_014834.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bbt:BBta_6094 putative serine protease do-like precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 2003198 10064078 Rpdx1_1870 Rhodopseudomonas palustris DX-1 protease Do YP_004108215.1 2001696 D 652103 CDS YP_004108216.1 316933234 10064079 2003204..2003845 1 NC_014834.1 PFAM: protein of unknown function DUF548; KEGG: atc:AGR_L_1626 hypothetical protein; hypothetical protein 2003845 10064079 Rpdx1_1871 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108216.1 2003204 D 652103 CDS YP_004108217.1 316933235 10064080 2004178..2005218 1 NC_014834.1 PFAM: Extracellular solute-binding protein, family 7; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: hch:HCH_00744 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; family 7 extracellular solute-binding protein 2005218 10064080 Rpdx1_1872 Rhodopseudomonas palustris DX-1 family 7 extracellular solute-binding protein YP_004108217.1 2004178 D 652103 CDS YP_004108218.1 316933236 10064081 2005335..2005877 1 NC_014834.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: aco:Amico_0458 tripartite ATP-independent periplasmic transporter DctQ component; tripartite AtP-independent periplasmic transporter subunit DctQ 2005877 10064081 Rpdx1_1873 Rhodopseudomonas palustris DX-1 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004108218.1 2005335 D 652103 CDS YP_004108219.1 316933237 10064082 2005892..2007214 1 NC_014834.1 KEGG: aco:Amico_0459 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 2007214 10064082 Rpdx1_1874 Rhodopseudomonas palustris DX-1 TRAP dicarboxylate transporter subunit DctM YP_004108219.1 2005892 D 652103 CDS YP_004108220.1 316933238 10064083 2007310..2008536 1 NC_014834.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_3863 formyl-CoA transferase; L-carnitine dehydratase/bile acid-inducible protein F 2008536 10064083 Rpdx1_1875 Rhodopseudomonas palustris DX-1 L-carnitine dehydratase/bile acid-inducible protein F YP_004108220.1 2007310 D 652103 CDS YP_004108221.1 316933239 10064084 complement(2008547..2008879) 1 NC_014834.1 PFAM: DNA polymerase beta domain protein region; KEGG: lch:Lcho_3353 DNA polymerase beta subunit; DNA polymerase beta domain-containing protein 2008879 10064084 Rpdx1_1876 Rhodopseudomonas palustris DX-1 DNA polymerase beta domain-containing protein YP_004108221.1 2008547 R 652103 CDS YP_004108222.1 316933240 10064085 complement(2008876..2009289) 1 NC_014834.1 KEGG: aat:D11S_0470 HI0074 family nucleotidyltransferase substrate binding protein; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; nucleotidyltransferase substrate-binding protein 2009289 10064085 Rpdx1_1877 Rhodopseudomonas palustris DX-1 nucleotidyltransferase substrate-binding protein YP_004108222.1 2008876 R 652103 CDS YP_004108223.1 316933241 10064086 2009495..2009662 1 NC_014834.1 hypothetical protein 2009662 10064086 Rpdx1_1878 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108223.1 2009495 D 652103 CDS YP_004108224.1 316933242 10064087 complement(2009600..2010553) 1 NC_014834.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein; Integrase catalytic subunit 2010553 10064087 Rpdx1_1879 Rhodopseudomonas palustris DX-1 Integrase catalytic subunit YP_004108224.1 2009600 R 652103 CDS YP_004108225.1 316933243 10064088 2010652..2011848 1 NC_014834.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mdi:METDI0840 putative phage integrase; integrase family protein 2011848 10064088 Rpdx1_1880 Rhodopseudomonas palustris DX-1 integrase family protein YP_004108225.1 2010652 D 652103 CDS YP_004108226.1 316933244 10064089 complement(2011851..2012342) 1 NC_014834.1 KEGG: apb:SAR116_0394 possible DNA-dependent RNA polymerase; hypothetical protein 2012342 10064089 Rpdx1_1881 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108226.1 2011851 R 652103 CDS YP_004108227.1 316933245 10064090 complement(2012463..2013056) 1 NC_014834.1 KEGG: bvi:Bcep1808_5579 amidase; hypothetical protein 2013056 10064090 Rpdx1_1882 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108227.1 2012463 R 652103 CDS YP_004108228.1 316933246 10064091 2013218..2013922 1 NC_014834.1 PFAM: Resolvase domain; KEGG: met:M446_1223 resolvase domain-containing protein; resolvase domain-containing protein 2013922 10064091 Rpdx1_1883 Rhodopseudomonas palustris DX-1 resolvase domain-containing protein YP_004108228.1 2013218 D 652103 CDS YP_004108229.1 316933247 10064092 2014936..2015034 1 NC_014834.1 hypothetical protein 2015034 10064092 Rpdx1_1884 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108229.1 2014936 D 652103 CDS YP_004108230.1 316933248 10064093 2015436..2015774 1 NC_014834.1 KEGG: bja:bll3892 hypothetical protein; hypothetical protein 2015774 10064093 Rpdx1_1885 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108230.1 2015436 D 652103 CDS YP_004108231.1 316933249 10064094 2015771..2015989 1 NC_014834.1 hypothetical protein 2015989 10064094 Rpdx1_1886 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108231.1 2015771 D 652103 CDS YP_004108232.1 316933250 10064095 2016136..2017167 1 NC_014834.1 KEGG: ote:Oter_1689 cell wall surface anchor family protein; hypothetical protein 2017167 10064095 Rpdx1_1887 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108232.1 2016136 D 652103 CDS YP_004108233.1 316933251 10064096 complement(2017658..2018887) 1 NC_014834.1 KEGG: hypothetical protein; hypothetical protein 2018887 10064096 Rpdx1_1888 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108233.1 2017658 R 652103 CDS YP_004108234.1 316933252 10064098 2020125..2020355 1 NC_014834.1 PFAM: SpoVT/AbrB domain protein; KEGG: alv:Alvin_0249 transcriptional regulator/antitoxin, MazE; SpoVT/AbrB domain-containing protein 2020355 10064098 Rpdx1_1889 Rhodopseudomonas palustris DX-1 SpoVT/AbrB domain-containing protein YP_004108234.1 2020125 D 652103 CDS YP_004108235.1 316933253 10064099 2020352..2020756 1 NC_014834.1 PFAM: PilT protein domain protein; KEGG: nmu:Nmul_A0984 PilT protein-like; PilT domain-containing protein 2020756 10064099 Rpdx1_1890 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004108235.1 2020352 D 652103 CDS YP_004108236.1 316933254 10064100 complement(2020802..2023936) 1 NC_014834.1 PFAM: acriflavin resistance protein; KEGG: nha:Nham_1509 acriflavin resistance protein; acriflavin resistance protein 2023936 10064100 Rpdx1_1891 Rhodopseudomonas palustris DX-1 acriflavin resistance protein YP_004108236.1 2020802 R 652103 CDS YP_004108237.1 316933255 10064101 complement(2023939..2025156) 1 NC_014834.1 KEGG: nha:Nham_1510 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 2025156 10064101 Rpdx1_1892 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004108237.1 2023939 R 652103 CDS YP_004108238.1 316933256 10064102 2025479..2025724 1 NC_014834.1 KEGG: bbt:BBta_3539 hypothetical protein; hypothetical protein 2025724 10064102 Rpdx1_1893 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108238.1 2025479 D 652103 CDS YP_004108239.1 316933257 10064103 2026030..2028369 1 NC_014834.1 KEGG: nha:Nham_1513 TonB-dependent receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent siderophore receptor 2028369 10064103 Rpdx1_1894 Rhodopseudomonas palustris DX-1 TonB-dependent siderophore receptor YP_004108239.1 2026030 D 652103 CDS YP_004108240.1 316933258 10064104 2028395..2029084 1 NC_014834.1 KEGG: bja:blr3905 putative hydroxylase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; 2OG-Fe(II) oxygenase 2029084 10064104 Rpdx1_1895 Rhodopseudomonas palustris DX-1 2OG-Fe(II) oxygenase YP_004108240.1 2028395 D 652103 CDS YP_004108241.1 316933259 10064105 2029081..2030007 1 NC_014834.1 KEGG: bja:blr3906 biopolymer transport protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB 2030007 10064105 Rpdx1_1896 Rhodopseudomonas palustris DX-1 tonB-system energizer ExbB YP_004108241.1 2029081 D 652103 CDS YP_004108242.1 316933260 10064106 2030011..2030460 1 NC_014834.1 KEGG: nha:Nham_1516 biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TonB system transport protein ExbD 2030460 10064106 Rpdx1_1897 Rhodopseudomonas palustris DX-1 TonB system transport protein ExbD YP_004108242.1 2030011 D 652103 CDS YP_004108243.1 316933261 10064107 2030574..2031368 1 NC_014834.1 TIGRFAM: TonB family protein; KEGG: nwi:Nwi_2307 TonB like protein; TonB family protein 2031368 10064107 Rpdx1_1898 Rhodopseudomonas palustris DX-1 TonB family protein YP_004108243.1 2030574 D 652103 CDS YP_004108244.1 316933262 10064108 complement(2031392..2031637) 1 NC_014834.1 KEGG: abo:ABO_2675 hypothetical protein; hypothetical protein 2031637 10064108 Rpdx1_1899 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108244.1 2031392 R 652103 CDS YP_004108245.1 316933263 10064109 complement(2031984..2032733) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_3549 3-oxoacyl-acyl carrier protein reductase; short-chain dehydrogenase/reductase SDR 2032733 10064109 Rpdx1_1900 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004108245.1 2031984 R 652103 CDS YP_004108246.1 316933264 10064110 complement(2032897..2033631) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO3102 putative 3-oxoacyl-[acyl-carrier-protein] reductase; short-chain dehydrogenase/reductase SDR 2033631 10064110 Rpdx1_1901 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004108246.1 2032897 R 652103 CDS YP_004108247.1 316933265 10064111 complement(2033801..2035669) 1 NC_014834.1 KEGG: bbt:BBta_3551 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 2035669 10064111 Rpdx1_1902 Rhodopseudomonas palustris DX-1 dihydroxy-acid dehydratase YP_004108247.1 2033801 R 652103 CDS YP_004108248.1 316933266 10064112 2035846..2036910 1 NC_014834.1 KEGG: bra:BRADO3105 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein 2036910 10064112 Rpdx1_1903 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108248.1 2035846 D 652103 CDS YP_004108249.1 316933267 10064113 2037001..2038326 1 NC_014834.1 PFAM: extracellular solute-binding protein family 1; KEGG: bra:BRADO3106 putative ABC transporter periplasmic-binding protein; family 1 extracellular solute-binding protein 2038326 10064113 Rpdx1_1904 Rhodopseudomonas palustris DX-1 family 1 extracellular solute-binding protein YP_004108249.1 2037001 D 652103 CDS YP_004108250.1 316933268 10064114 2038672..2039625 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_3555 putative ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 2039625 10064114 Rpdx1_1905 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004108250.1 2038672 D 652103 CDS YP_004108251.1 316933269 10064115 2039618..2040544 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_3556 putative ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 2040544 10064115 Rpdx1_1906 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004108251.1 2039618 D 652103 CDS YP_004108252.1 316933270 10064116 2040768..2041754 1 NC_014834.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bra:BRADO3109 putative UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 2041754 10064116 Rpdx1_1907 Rhodopseudomonas palustris DX-1 NAD-dependent epimerase/dehydratase YP_004108252.1 2040768 D 652103 CDS YP_004108253.1 316933271 10064117 2041947..2043116 1 NC_014834.1 PFAM: Thiolase-like; KEGG: bra:BRADO3110 acetyl-CoA acetyltransferase; Thiolase-like protein 2043116 10064117 Rpdx1_1908 Rhodopseudomonas palustris DX-1 Thiolase-like protein YP_004108253.1 2041947 D 652103 CDS YP_004108254.1 316933272 10064118 2043138..2044649 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dsh:Dshi_0700 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2044649 10064118 Rpdx1_1909 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004108254.1 2043138 D 652103 CDS YP_004108255.1 316933273 10064119 complement(2044655..2045536) 1 NC_014834.1 KEGG: svi:Svir_38940 acyl dehydratase; acyl dehydratase 2045536 10064119 Rpdx1_1910 Rhodopseudomonas palustris DX-1 acyl dehydratase YP_004108255.1 2044655 R 652103 CDS YP_004108256.1 316933274 10064120 2045745..2046947 1 NC_014834.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbt:BBta_3565 putative formyl-CoA transferase; L-carnitine dehydratase/bile acid-inducible protein F 2046947 10064120 Rpdx1_1911 Rhodopseudomonas palustris DX-1 L-carnitine dehydratase/bile acid-inducible protein F YP_004108256.1 2045745 D 652103 CDS YP_004108257.1 316933275 10064122 2047311..2048447 1 NC_014834.1 KEGG: bbt:BBta_3567 putative thiolase; propanoyl-CoA C-acyltransferase 2048447 10064122 Rpdx1_1913 Rhodopseudomonas palustris DX-1 propanoyl-CoA C-acyltransferase YP_004108257.1 2047311 D 652103 CDS YP_004108258.1 316933276 10064123 2048444..2048809 1 NC_014834.1 PFAM: protein of unknown function DUF35; KEGG: bja:blr3928 hypothetical protein; hypothetical protein 2048809 10064123 Rpdx1_1914 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108258.1 2048444 D 652103 CDS YP_004108259.1 316933277 10064124 complement(2048861..2049415) 1 NC_014834.1 KEGG: nmu:Nmul_A1418 hypothetical protein; hypothetical protein 2049415 10064124 Rpdx1_1915 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108259.1 2048861 R 652103 CDS YP_004108260.1 316933278 10064125 complement(2049521..2051587) 1 NC_014834.1 KEGG: bja:bll3936 hypothetical protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter 2051587 10064125 Rpdx1_1916 Rhodopseudomonas palustris DX-1 TRAP transporter YP_004108260.1 2049521 R 652103 CDS YP_004108261.1 316933279 10064126 complement(2051615..2052775) 1 NC_014834.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:bll3937 hypothetical protein; TAXI family TRAP transporter solute receptor 2052775 10064126 Rpdx1_1917 Rhodopseudomonas palustris DX-1 TAXI family TRAP transporter solute receptor YP_004108261.1 2051615 R 652103 CDS YP_004108262.1 316933280 10064127 complement(2052962..2053183) 1 NC_014834.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bja:bsl3938 putative biotinylated protein; biotin/lipoyl attachment domain-containing protein 2053183 10064127 Rpdx1_1918 Rhodopseudomonas palustris DX-1 biotin/lipoyl attachment domain-containing protein YP_004108262.1 2052962 R 652103 CDS YP_004108263.1 316933281 10064128 2053449..2054414 1 NC_014834.1 KEGG: bbt:BBta_3572 IclR family transcriptional regulator; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 2054414 10064128 Rpdx1_1919 Rhodopseudomonas palustris DX-1 IclR family transcriptional regulator YP_004108263.1 2053449 D 652103 CDS YP_004108264.1 316933282 10064129 2054323..2055882 1 NC_014834.1 KEGG: bja:blr3940 putative propionyl-CoA carboxylase beta chain; manually curated; PFAM: carboxyl transferase; carboxyl transferase 2055882 10064129 Rpdx1_1920 Rhodopseudomonas palustris DX-1 carboxyl transferase YP_004108264.1 2054323 D 652103 CDS YP_004108265.1 316933283 10064130 complement(2055935..2057221) 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll3948 monocarboxylate MFS permease; major facilitator superfamily protein 2057221 10064130 Rpdx1_1921 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004108265.1 2055935 R 652103 CDS YP_004108266.1 316933284 10064131 complement(2057337..2058107) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_3576 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2058107 10064131 Rpdx1_1922 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004108266.1 2057337 R 652103 CDS YP_004108267.1 316933285 10064132 2058252..2058827 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bja:blr3951 hypothetical protein; thioesterase superfamily protein 2058827 10064132 Rpdx1_1923 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004108267.1 2058252 D 652103 CDS YP_004108268.1 316933286 10064133 2058901..2059569 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bbt:BBta_3577 TetR family transcriptional regulator; regulatory protein TetR 2059569 10064133 Rpdx1_1924 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004108268.1 2058901 D 652103 CDS YP_004108269.1 316933287 10064134 2059729..2061225 1 NC_014834.1 KEGG: bra:BRADO3137 methylmalonate-semialdehyde dehydrogenase; TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; methylmalonate-semialdehyde dehydrogenase 2061225 10064134 Rpdx1_1925 Rhodopseudomonas palustris DX-1 methylmalonate-semialdehyde dehydrogenase YP_004108269.1 2059729 D 652103 CDS YP_004108270.1 316933288 10064135 2061267..2061512 1 NC_014834.1 KEGG: xau:Xaut_2192 hypothetical protein; hypothetical protein 2061512 10064135 Rpdx1_1926 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108270.1 2061267 D 652103 CDS YP_004108271.1 316933289 10064136 2061509..2061937 1 NC_014834.1 manually curated; KEGG: xau:Xaut_2191 PilT domain-containing protein; PilT domain-containing protein 2061937 10064136 Rpdx1_1927 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004108271.1 2061509 D 652103 CDS YP_004108272.1 316933290 10064137 2061934..2063082 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nha:Nham_2558 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 2063082 10064137 Rpdx1_1928 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004108272.1 2061934 D 652103 CDS YP_004108273.1 316933291 10064138 2063079..2064152 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO3139 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2064152 10064138 Rpdx1_1929 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004108273.1 2063079 D 652103 CDS YP_004108274.1 316933292 10064139 2064186..2065073 1 NC_014834.1 KEGG: bbt:BBta_3581 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase 2065073 10064139 Rpdx1_1930 Rhodopseudomonas palustris DX-1 3-hydroxyisobutyrate dehydrogenase YP_004108274.1 2064186 D 652103 CDS YP_004108275.1 316933293 10064140 2065234..2066955 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr3958 putative acetyl-coenzyme A synthetase; AMP-dependent synthetase and ligase 2066955 10064140 Rpdx1_1931 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004108275.1 2065234 D 652103 CDS YP_004108276.1 316933294 10064141 complement(2067141..2068031) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr5604 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2068031 10064141 Rpdx1_1932 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004108276.1 2067141 R 652103 CDS YP_004108277.1 316933295 10064142 complement(2068163..2069578) 1 NC_014834.1 PFAM: Amidase; KEGG: bja:blr5603 amidase; amidase 2069578 10064142 Rpdx1_1933 Rhodopseudomonas palustris DX-1 amidase YP_004108277.1 2068163 R 652103 CDS YP_004108278.1 316933296 10064143 complement(2069571..2070758) 1 NC_014834.1 TIGRFAM: amidohydrolase; KEGG: bbt:BBta_5260 putative amidohydrolase family protein; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2070758 10064143 Rpdx1_1934 Rhodopseudomonas palustris DX-1 amidohydrolase YP_004108278.1 2069571 R 652103 CDS YP_004108279.1 316933297 10064145 complement(2071255..2072358) 1 NC_014834.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: ara:Arad_7796 hypothetical protein; filamentation induced by cAMP protein fic 2072358 10064145 Rpdx1_1935 Rhodopseudomonas palustris DX-1 filamentation induced by cAMP protein fic YP_004108279.1 2071255 R 652103 CDS YP_004108280.1 316933298 10064146 complement(2072489..2073652) 1 NC_014834.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: bbt:BBta_p0025 putative cAMP-induced filamentation protein; filamentation induced by cAMP protein fic 2073652 10064146 Rpdx1_1936 Rhodopseudomonas palustris DX-1 filamentation induced by cAMP protein fic YP_004108280.1 2072489 R 652103 CDS YP_004108281.1 316933299 10064147 2073943..2074605 1 NC_014834.1 manually curated; KEGG: smd:Smed_5453 hypothetical protein; hypothetical protein 2074605 10064147 Rpdx1_1937 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108281.1 2073943 D 652103 CDS YP_004108282.1 316933300 10064148 2074598..2075464 1 NC_014834.1 PFAM: Domain of unknown function DUF1814; KEGG: smd:Smed_5454 hypothetical protein; hypothetical protein 2075464 10064148 Rpdx1_1938 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108282.1 2074598 D 652103 CDS YP_004108283.1 316933301 10064149 complement(2075609..2076340) 1 NC_014834.1 KEGG: cce:Ccel_0516 hypothetical protein; hypothetical protein 2076340 10064149 Rpdx1_1939 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108283.1 2075609 R 652103 CDS YP_004108284.1 316933302 10064150 complement(2076479..2077339) 1 NC_014834.1 PFAM: protein of unknown function DUF23; KEGG: nha:Nham_1056 hypothetical protein; hypothetical protein 2077339 10064150 Rpdx1_1940 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108284.1 2076479 R 652103 CDS YP_004108285.1 316933303 10064151 complement(2077430..2077858) 1 NC_014834.1 PFAM: UspA domain protein; KEGG: app:CAP2UW1_0552 UspA domain protein; UspA domain-containing protein 2077858 10064151 Rpdx1_1941 Rhodopseudomonas palustris DX-1 UspA domain-containing protein YP_004108285.1 2077430 R 652103 CDS YP_004108286.1 316933304 10064152 2078023..2078427 1 NC_014834.1 KEGG: bra:BRADO2934 putative signal peptide; hypothetical protein 2078427 10064152 Rpdx1_1942 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108286.1 2078023 D 652103 CDS YP_004108287.1 316933305 10064153 complement(2078477..2079652) 1 NC_014834.1 PFAM: amine oxidase; KEGG: bbt:BBta_5237 putative salicylate 1-monooxygenase; amine oxidase 2079652 10064153 Rpdx1_1943 Rhodopseudomonas palustris DX-1 amine oxidase YP_004108287.1 2078477 R 652103 CDS YP_004108288.1 316933306 10064154 complement(2079689..2079934) 1 NC_014834.1 KEGG: bja:bsr5590 hypothetical protein; hypothetical protein 2079934 10064154 Rpdx1_1944 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108288.1 2079689 R 652103 CDS YP_004108289.1 316933307 10064155 2080145..2081293 1 NC_014834.1 KEGG: bbt:BBta_5235 hypothetical protein; hypothetical protein 2081293 10064155 Rpdx1_1945 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108289.1 2080145 D 652103 CDS YP_004108290.1 316933308 10064156 2081462..2082214 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:bll5588 hypothetical protein; alpha/beta hydrolase fold protein 2082214 10064156 Rpdx1_1946 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004108290.1 2081462 D 652103 CDS YP_004108291.1 316933309 10064157 2082449..2083276 1 NC_014834.1 KEGG: bbt:BBta_5231 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine O-acetyltransferase 2083276 10064157 Rpdx1_1947 Rhodopseudomonas palustris DX-1 serine O-acetyltransferase YP_004108291.1 2082449 D 652103 CDS YP_004108292.1 316933310 10064158 2083461..2083679 1 NC_014834.1 KEGG: nha:Nham_2578 hypothetical protein; hypothetical protein 2083679 10064158 Rpdx1_1948 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108292.1 2083461 D 652103 CDS YP_004108293.1 316933311 10064159 complement(2083694..2084326) 1 NC_014834.1 KEGG: bra:BRADO2942 hypothetical protein; hypothetical protein 2084326 10064159 Rpdx1_1949 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108293.1 2083694 R 652103 CDS YP_004108294.1 316933312 10064160 2084595..2084933 1 NC_014834.1 KEGG: nwi:Nwi_2173 hypothetical protein; hypothetical protein 2084933 10064160 Rpdx1_1950 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108294.1 2084595 D 652103 CDS YP_004108295.1 316933313 10064161 2084993..2085523 1 NC_014834.1 KEGG: nha:Nham_2575 carbonic anhydrase; carbonic anhydrase 2085523 10064161 Rpdx1_1951 Rhodopseudomonas palustris DX-1 carbonic anhydrase YP_004108295.1 2084993 D 652103 CDS YP_004108296.1 316933314 10064162 complement(2085552..2085719) 1 NC_014834.1 manually curated; KEGG: bra:BRADO2945 hypothetical protein; hypothetical protein 2085719 10064162 Rpdx1_1952 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108296.1 2085552 R 652103 CDS YP_004108297.1 316933315 10064163 complement(2085649..2085921) 1 NC_014834.1 KEGG: bja:blr5580 hypothetical protein; hypothetical protein 2085921 10064163 Rpdx1_1953 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108297.1 2085649 R 652103 CDS YP_004108298.1 316933316 10064164 complement(2086139..2087632) 1 NC_014834.1 PFAM: porin; KEGG: bbt:BBta_3063 porin precursor domain-containing protein; porin 2087632 10064164 Rpdx1_1954 Rhodopseudomonas palustris DX-1 porin YP_004108298.1 2086139 R 652103 CDS YP_004108299.1 316933317 10064165 2088156..2088743 1 NC_014834.1 KEGG: bja:blr4984 transcriptional regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 2088743 10064165 Rpdx1_1955 Rhodopseudomonas palustris DX-1 MarR family transcriptional regulator YP_004108299.1 2088156 D 652103 CDS YP_004108300.1 316933318 10064166 2089324..2089497 1 NC_014834.1 KEGG: tet:TTHERM_00998850 hypothetical protein; hypothetical protein 2089497 10064166 Rpdx1_1956 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108300.1 2089324 D 652103 CDS YP_004108301.1 316933319 10064167 2089527..2089892 1 NC_014834.1 KEGG: bbt:BBta_3101 hypothetical protein; hypothetical protein 2089892 10064167 Rpdx1_1957 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108301.1 2089527 D 652103 CDS YP_004108302.1 316933320 10064168 2090156..2090431 1 NC_014834.1 KEGG: bja:blr0365 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 2090431 10064168 Rpdx1_1958 Rhodopseudomonas palustris DX-1 30S ribosomal protein S21 YP_004108302.1 2090156 D 652103 CDS YP_004108303.1 316933321 10064169 complement(2090521..2090658) 1 NC_014834.1 KEGG: bbt:BBta_2403 hypothetical protein; hypothetical protein 2090658 10064169 Rpdx1_1959 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108303.1 2090521 R 652103 CDS YP_004108304.1 316933322 10064170 complement(2091307..2091924) 1 NC_014834.1 KEGG: bbt:BBta_5218 hypothetical protein; hypothetical protein 2091924 10064170 Rpdx1_1960 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108304.1 2091307 R 652103 CDS YP_004108305.1 316933323 10064171 complement(2092256..2092867) 1 NC_014834.1 PFAM: type IV pilus assembly PilZ; KEGG: bja:blr5568 hypothetical protein; type IV pilus assembly PilZ 2092867 10064171 Rpdx1_1961 Rhodopseudomonas palustris DX-1 type IV pilus assembly PilZ YP_004108305.1 2092256 R 652103 CDS YP_004108306.1 316933324 10064172 2093231..2093995 1 NC_014834.1 KEGG: bja:blr0395 hypothetical protein; putative Crp/Fnr family transcriptional regulator 2093995 10064172 Rpdx1_1962 Rhodopseudomonas palustris DX-1 putative Crp/Fnr family transcriptional regulator YP_004108306.1 2093231 D 652103 CDS YP_004108307.1 316933325 10064173 complement(2093977..2094534) 1 NC_014834.1 PFAM: protein of unknown function DUF1457; KEGG: nha:Nham_1646 hypothetical protein; hypothetical protein 2094534 10064173 Rpdx1_1963 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108307.1 2093977 R 652103 CDS YP_004108308.1 316933326 10064174 2095093..2095857 1 NC_014834.1 PFAM: Rhomboid family protein; KEGG: nha:Nham_1648 rhomboid-like protein; rhomboid family protein 2095857 10064174 Rpdx1_1964 Rhodopseudomonas palustris DX-1 rhomboid family protein YP_004108308.1 2095093 D 652103 CDS YP_004108309.1 316933327 10064175 2096092..2096520 1 NC_014834.1 KEGG: bja:bll5551 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; hypothetical protein 2096520 10064175 Rpdx1_1965 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108309.1 2096092 D 652103 CDS YP_004108310.1 316933328 10064176 complement(2096542..2097177) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bbt:BBta_7041 TetR family transcriptional regulator; regulatory protein TetR 2097177 10064176 Rpdx1_1966 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004108310.1 2096542 R 652103 CDS YP_004108311.1 316933329 10064178 2099617..2100732 1 NC_014834.1 KEGG: bbt:BBta_7043 putative uncharacterized iron-regulated membrane protein; putative iron-regulated membrane protein 2100732 10064178 Rpdx1_1968 Rhodopseudomonas palustris DX-1 putative iron-regulated membrane protein YP_004108311.1 2099617 D 652103 CDS YP_004108312.1 316933330 10064179 2100729..2100941 1 NC_014834.1 KEGG: apt:APA01_13520 hypothetical protein; hypothetical protein 2100941 10064179 Rpdx1_1969 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108312.1 2100729 D 652103 CDS YP_004108313.1 316933331 10064180 complement(2100964..2101995) 1 NC_014834.1 PFAM: Patatin; KEGG: nha:Nham_1650 patatin; patatin 2101995 10064180 Rpdx1_1970 Rhodopseudomonas palustris DX-1 patatin YP_004108313.1 2100964 R 652103 CDS YP_004108314.1 316933332 10064181 2102149..2103288 1 NC_014834.1 KEGG: nha:Nham_1651 hypothetical protein; hypothetical protein 2103288 10064181 Rpdx1_1971 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108314.1 2102149 D 652103 CDS YP_004108315.1 316933333 10064182 2103470..2105962 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bja:bll5542 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase 2105962 10064182 Rpdx1_1972 Rhodopseudomonas palustris DX-1 PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase YP_004108315.1 2103470 D 652103 CDS YP_004108316.1 316933334 10064184 complement(2107987..2108496) 1 NC_014834.1 PFAM: nitroreductase; KEGG: bja:blr5540 hypothetical protein; nitroreductase 2108496 10064184 Rpdx1_1974 Rhodopseudomonas palustris DX-1 nitroreductase YP_004108316.1 2107987 R 652103 CDS YP_004108317.1 316933335 10064185 2108835..2109413 1 NC_014834.1 KEGG: oca:OCAR_5107 hypothetical protein; hypothetical protein 2109413 10064185 Rpdx1_1975 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108317.1 2108835 D 652103 CDS YP_004108318.1 316933336 10064186 2109493..2109861 1 NC_014834.1 KEGG: neu:NE1587 helix-hairpin-helix DNA-binding motif-containing protein; putative transcriptional regulator with HTH domain 2109861 10064186 Rpdx1_1976 Rhodopseudomonas palustris DX-1 putative transcriptional regulator with HTH domain YP_004108318.1 2109493 D 652103 CDS YP_004108319.1 316933337 10064187 complement(2109878..2111959) 1 NC_014834.1 KEGG: bra:BRADO2971 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain protein; Anticodon-binding domain protein; threonyl-tRNA synthetase 2111959 10064187 Rpdx1_1977 Rhodopseudomonas palustris DX-1 threonyl-tRNA synthetase YP_004108319.1 2109878 R 652103 CDS YP_004108320.1 316933338 10064188 2112153..2113301 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll5536 major facilitator superfamily transporter; major facilitator superfamily protein 2113301 10064188 Rpdx1_1978 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004108320.1 2112153 D 652103 CDS YP_004108321.1 316933339 10064189 complement(2113222..2113518) 1 NC_014834.1 KEGG: clo:HMPREF0868_0929 hypothetical protein; hypothetical protein 2113518 10064189 Rpdx1_1979 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108321.1 2113222 R 652103 CDS YP_004108322.1 316933340 10064190 complement(2113663..2114319) 1 NC_014834.1 PFAM: O-methyltransferase family 3; KEGG: bte:BTH_II0913 O-methyltransferase; O-methyltransferase family protein 2114319 10064190 Rpdx1_1980 Rhodopseudomonas palustris DX-1 O-methyltransferase family protein YP_004108322.1 2113663 R 652103 CDS YP_004108323.1 316933341 10064191 2114416..2115048 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bja:blr4230 transcriptional regulatory protein; regulatory protein TetR 2115048 10064191 Rpdx1_1981 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004108323.1 2114416 D 652103 CDS YP_004108324.1 316933342 10064192 2115065..2115478 1 NC_014834.1 KEGG: cak:Caul_4714 hypothetical protein; hypothetical protein 2115478 10064192 Rpdx1_1982 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108324.1 2115065 D 652103 CDS YP_004108325.1 316933343 10064193 complement(2115468..2115665) 1 NC_014834.1 KEGG: sak:SAK_0962 TenA/THI-4 family protein; TenA/THI-4 family protein 2115665 10064193 Rpdx1_1983 Rhodopseudomonas palustris DX-1 TenA/THI-4 family protein YP_004108325.1 2115468 R 652103 CDS YP_004108326.1 316933344 10064194 complement(2115767..2116000) 1 NC_014834.1 KEGG: bbt:BBta_7551 hypothetical protein; hypothetical protein 2116000 10064194 Rpdx1_1984 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108326.1 2115767 R 652103 CDS YP_004108327.1 316933345 10064195 complement(2116101..2116310) 1 NC_014834.1 KEGG: nwi:Nwi_2375 cold-shock protein, DNA-binding; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 2116310 10064195 Rpdx1_1985 Rhodopseudomonas palustris DX-1 cold-shock DNA-binding domain-containing protein YP_004108327.1 2116101 R 652103 CDS YP_004108328.1 316933346 10064196 2116587..2117840 1 NC_014834.1 PFAM: Citrate transporter; KEGG: bra:BRADO3240 putative arsenite permease; citrate transporter 2117840 10064196 Rpdx1_1986 Rhodopseudomonas palustris DX-1 citrate transporter YP_004108328.1 2116587 D 652103 CDS YP_004108329.1 316933347 10064197 2117995..2118720 1 NC_014834.1 KEGG: bra:BRADO3451 putative signal peptide; hypothetical protein 2118720 10064197 Rpdx1_1987 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108329.1 2117995 D 652103 CDS YP_004108330.1 316933348 10064198 complement(2118707..2119108) 1 NC_014834.1 PFAM: protein of unknown function DUF37; KEGG: bja:blr5525 hypothetical protein; hypothetical protein 2119108 10064198 Rpdx1_1988 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108330.1 2118707 R 652103 CDS YP_004108331.1 316933349 10064199 2119349..2120239 1 NC_014834.1 KEGG: nha:Nham_1655 hypothetical protein; hypothetical protein 2120239 10064199 Rpdx1_1989 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108331.1 2119349 D 652103 CDS YP_004108332.1 316933350 10064200 complement(2120383..2120835) 1 NC_014834.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: bra:BRADO2983 hypothetical protein; nitrogen-fixing NifU domain-containing protein 2120835 10064200 Rpdx1_1990 Rhodopseudomonas palustris DX-1 nitrogen-fixing NifU domain-containing protein YP_004108332.1 2120383 R 652103 CDS YP_004108333.1 316933351 10064201 2121103..2121792 1 NC_014834.1 TIGRFAM: GTP cyclohydrolase I; KEGG: bja:bll5522 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; GTP cyclohydrolase I 2121792 10064201 Rpdx1_1991 Rhodopseudomonas palustris DX-1 GTP cyclohydrolase I YP_004108333.1 2121103 D 652103 CDS YP_004108334.1 316933352 10064202 2121821..2122276 1 NC_014834.1 manually curated; KEGG: nha:Nham_1658 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase 2122276 10064202 Rpdx1_1992 Rhodopseudomonas palustris DX-1 phosphoribosyl-AMP cyclohydrolase YP_004108334.1 2121821 D 652103 CDS YP_004108335.1 316933353 10064203 complement(2122286..2122993) 1 NC_014834.1 KEGG: mpo:Mpop_3241 hypothetical protein; hypothetical protein 2122993 10064203 Rpdx1_1993 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108335.1 2122286 R 652103 CDS YP_004108336.1 316933354 10064204 2123207..2124250 1 NC_014834.1 PFAM: Lytic transglycosylase catalytic; KEGG: bja:bll5520 hypothetical protein; lytic transglycosylase 2124250 10064204 Rpdx1_1994 Rhodopseudomonas palustris DX-1 lytic transglycosylase YP_004108336.1 2123207 D 652103 CDS YP_004108337.1 316933355 10064205 complement(2124259..2125206) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpo:Mpop_1559 transcriptional regulator, LysR family; LysR family transcriptional regulator 2125206 10064205 Rpdx1_1995 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004108337.1 2124259 R 652103 CDS YP_004108338.1 316933356 10064206 complement(2125285..2126958) 1 NC_014834.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: azc:AZC_3883 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2126958 10064206 Rpdx1_1996 Rhodopseudomonas palustris DX-1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004108338.1 2125285 R 652103 CDS YP_004108339.1 316933357 10064207 complement(2127019..2127855) 1 NC_014834.1 KEGG: mpo:Mpop_3784 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2127855 10064207 Rpdx1_1997 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108339.1 2127019 R 652103 CDS YP_004108340.1 316933358 10064208 complement(2127852..2128844) 1 NC_014834.1 KEGG: bav:BAV2580 ABC transporter, substrate binding protein; hypothetical protein 2128844 10064208 Rpdx1_1998 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108340.1 2127852 R 652103 CDS YP_004108341.1 316933359 10064209 complement(2128880..2129716) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pnu:Pnuc_1186 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 2129716 10064209 Rpdx1_1999 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004108341.1 2128880 R 652103 CDS YP_004108342.1 316933360 10064210 2130042..2131211 1 NC_014834.1 PFAM: Protein of unknown function DUF2336; KEGG: bja:bll5519 hypothetical protein; hypothetical protein 2131211 10064210 Rpdx1_2000 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108342.1 2130042 D 652103 CDS YP_004108343.1 316933361 10064211 complement(2131358..2131948) 1 NC_014834.1 PFAM: Hpt domain protein; KEGG: bja:blr5518 hypothetical protein; Hpt domain-containing protein 2131948 10064211 Rpdx1_2001 Rhodopseudomonas palustris DX-1 Hpt domain-containing protein YP_004108343.1 2131358 R 652103 CDS YP_004108344.1 316933362 10064212 complement(2131966..2132511) 1 NC_014834.1 KEGG: bja:blr5517 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 2132511 10064212 Rpdx1_2002 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004108344.1 2131966 R 652103 CDS YP_004108345.1 316933363 10064213 2132730..2132933 1 NC_014834.1 KEGG: mpd:MCP_2871 hypothetical protein; hypothetical protein 2132933 10064213 Rpdx1_2003 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108345.1 2132730 D 652103 CDS YP_004108346.1 316933364 10064214 2133133..2133309 1 NC_014834.1 hypothetical protein 2133309 10064214 Rpdx1_2004 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108346.1 2133133 D 652103 CDS YP_004108347.1 316933365 10064215 complement(2133438..2134265) 1 NC_014834.1 PFAM: ATP-NAD/AcoX kinase; KEGG: nha:Nham_1663 inorganic polyphosphate/ATP-NAD kinase; ATP-NAD/AcoX kinase 2134265 10064215 Rpdx1_2005 Rhodopseudomonas palustris DX-1 ATP-NAD/AcoX kinase YP_004108347.1 2133438 R 652103 CDS YP_004108348.1 316933366 10064216 2134451..2134870 1 NC_014834.1 KEGG: nha:Nham_1665 hypothetical protein; hypothetical protein 2134870 10064216 Rpdx1_2006 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108348.1 2134451 D 652103 CDS YP_004108349.1 316933367 10064217 2135050..2135772 1 NC_014834.1 KEGG: nha:Nham_1666 OmpA-like transmembrane region; OmpA-like transmembrane region 2135772 10064217 Rpdx1_2007 Rhodopseudomonas palustris DX-1 OmpA-like transmembrane region YP_004108349.1 2135050 D 652103 CDS YP_004108350.1 316933368 10064218 2135948..2136073 1 NC_014834.1 hypothetical protein 2136073 10064218 Rpdx1_2008 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108350.1 2135948 D 652103 CDS YP_004108351.1 316933369 10064219 2136241..2136354 1 NC_014834.1 KEGG: hvo:HVO_A0154 sodium/solute symporter; sodium/solute symporter 2136354 10064219 Rpdx1_2009 Rhodopseudomonas palustris DX-1 sodium/solute symporter YP_004108351.1 2136241 D 652103 CDS YP_004108352.1 316933370 10064220 complement(2136315..2136542) 1 NC_014834.1 KEGG: pcs:Pc12g05190 Pc12g05190; hypothetical protein 2136542 10064220 Rpdx1_2010 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108352.1 2136315 R 652103 CDS YP_004108353.1 316933371 10064221 2136963..2137544 1 NC_014834.1 KEGG: bja:bll4036 hypothetical protein; hypothetical protein 2137544 10064221 Rpdx1_2011 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108353.1 2136963 D 652103 CDS YP_004108354.1 316933372 10064222 2137715..2138161 1 NC_014834.1 PFAM: BLUF domain protein; KEGG: met:M446_1828 BLUF domain-containing protein; BLUF domain-containing protein 2138161 10064222 Rpdx1_2012 Rhodopseudomonas palustris DX-1 BLUF domain-containing protein YP_004108354.1 2137715 D 652103 CDS YP_004108355.1 316933373 10064223 complement(2138671..2139123) 1 NC_014834.1 KEGG: ilo:IL1489 hypothetical protein; hypothetical protein 2139123 10064223 Rpdx1_2013 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108355.1 2138671 R 652103 CDS YP_004108356.1 316933374 10064224 2139404..2139841 1 NC_014834.1 KEGG: syf:Synpcc7942_1587 integral membrane protein-like; manually curated; PFAM: protein of unknown function DUF1036; hypothetical protein 2139841 10064224 Rpdx1_2014 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108356.1 2139404 D 652103 CDS YP_004108357.1 316933375 10064225 complement(2139843..2140490) 1 NC_014834.1 KEGG: lma:L5683.01 hypothetical protein; hypothetical protein 2140490 10064225 Rpdx1_2015 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108357.1 2139843 R 652103 CDS YP_004108358.1 316933376 10064226 complement(2140507..2141844) 1 NC_014834.1 KEGG: bgl:bglu_2g14830 hypothetical protein; hypothetical protein 2141844 10064226 Rpdx1_2016 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108358.1 2140507 R 652103 CDS YP_004108359.1 316933377 10064229 2143291..2143770 1 NC_014834.1 KEGG: oca:OCAR_5638 hypothetical protein; hypothetical protein 2143770 10064229 Rpdx1_2018 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108359.1 2143291 D 652103 CDS YP_004108360.1 316933378 10064230 2143828..2144331 1 NC_014834.1 KEGG: nha:Nham_2509 hypothetical protein; hypothetical protein 2144331 10064230 Rpdx1_2019 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108360.1 2143828 D 652103 CDS YP_004108361.1 316933379 10064231 complement(2144354..2145181) 1 NC_014834.1 KEGG: nha:Nham_2508 RNA methyltransferase TrmH, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; TrmH family RNA methyltransferase 2145181 10064231 Rpdx1_2020 Rhodopseudomonas palustris DX-1 TrmH family RNA methyltransferase YP_004108361.1 2144354 R 652103 CDS YP_004108362.1 316933380 10064233 complement(2146126..2146407) 1 NC_014834.1 KEGG: bbt:BBta_1063 hypothetical protein; hypothetical protein 2146407 10064233 Rpdx1_2021 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108362.1 2146126 R 652103 CDS YP_004108363.1 316933381 10064234 complement(2146654..2146905) 1 NC_014834.1 KEGG: bbt:BBta_1027 hypothetical protein; hypothetical protein 2146905 10064234 Rpdx1_2022 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108363.1 2146654 R 652103 CDS YP_004108364.1 316933382 10064235 2147668..2148888 1 NC_014834.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bbt:BBta_1028 putative capsule polysaccharide export outer membrane protein; polysaccharide export protein 2148888 10064235 Rpdx1_2023 Rhodopseudomonas palustris DX-1 polysaccharide export protein YP_004108364.1 2147668 D 652103 CDS YP_004108365.1 316933383 10064236 2148885..2150351 1 NC_014834.1 PFAM: O-antigen polymerase; KEGG: bbt:BBta_1029 putative O-antigen polymerase, putative membrane protein; O-antigen polymerase 2150351 10064236 Rpdx1_2024 Rhodopseudomonas palustris DX-1 O-antigen polymerase YP_004108365.1 2148885 D 652103 CDS YP_004108366.1 316933384 10064237 complement(2150428..2151090) 1 NC_014834.1 KEGG: bbt:BBta_1030 hypothetical protein; hypothetical protein 2151090 10064237 Rpdx1_2025 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108366.1 2150428 R 652103 CDS YP_004108367.1 316933385 10064238 complement(2151538..2151702) 1 NC_014834.1 KEGG: mav:MAV_0960 hypothetical protein; hypothetical protein 2151702 10064238 Rpdx1_2026 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108367.1 2151538 R 652103 CDS YP_004108368.1 316933386 10064239 complement(2151797..2152471) 1 NC_014834.1 KEGG: bra:BRADO4757 exopolysaccharide production protein ExoY; PFAM: sugar transferase; undecaprenyl-phosphate galactose phosphotransferase 2152471 10064239 Rpdx1_2027 Rhodopseudomonas palustris DX-1 undecaprenyl-phosphate galactose phosphotransferase YP_004108368.1 2151797 R 652103 CDS YP_004108369.1 316933387 10064240 complement(2153113..2153826) 1 NC_014834.1 KEGG: bbt:BBta_1033 hypothetical protein; hypothetical protein 2153826 10064240 Rpdx1_2028 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108369.1 2153113 R 652103 CDS YP_004108370.1 316933388 10064241 complement(2153826..2156174) 1 NC_014834.1 KEGG: bbt:BBta_1034 putative tyrosine-protein kinase injvolved in exopolysaccharide polymerization; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein 2156174 10064241 Rpdx1_2029 Rhodopseudomonas palustris DX-1 capsular exopolysaccharide family protein YP_004108370.1 2153826 R 652103 CDS YP_004108371.1 316933389 10064242 complement(2156233..2156871) 1 NC_014834.1 KEGG: bbt:BBta_1035 hypothetical protein; hypothetical protein 2156871 10064242 Rpdx1_2030 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108371.1 2156233 R 652103 CDS YP_004108372.1 316933390 10064243 2157120..2157896 1 NC_014834.1 PFAM: metallophosphoesterase; KEGG: bbt:BBta_1036 putative serine/threonine protein phosphatase; metallophosphoesterase 2157896 10064243 Rpdx1_2031 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004108372.1 2157120 D 652103 CDS YP_004108373.1 316933391 10064244 complement(2157893..2159011) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: bbt:BBta_1037 putative glycosyltransferase group 1 family protein; glycosyl transferase group 1 protein 2159011 10064244 Rpdx1_2032 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004108373.1 2157893 R 652103 CDS YP_004108374.1 316933392 10064245 complement(2159041..2159784) 1 NC_014834.1 PFAM: glycosyl transferase family 25; KEGG: mpt:Mpe_A0728 glycosyltransferase involved in LPS biosynthesis-like protein; glycosyl transferase family protein 2159784 10064245 Rpdx1_2033 Rhodopseudomonas palustris DX-1 glycosyl transferase family protein YP_004108374.1 2159041 R 652103 CDS YP_004108375.1 316933393 10064246 complement(2159926..2161071) 1 NC_014834.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: mes:Meso_2584 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 2161071 10064246 Rpdx1_2034 Rhodopseudomonas palustris DX-1 DegT/DnrJ/EryC1/StrS aminotransferase YP_004108375.1 2159926 R 652103 CDS YP_004108376.1 316933394 10064247 2161579..2162715 1 NC_014834.1 PFAM: acyltransferase 3; KEGG: xau:Xaut_4681 acyltransferase 3; acyltransferase 3 2162715 10064247 Rpdx1_2035 Rhodopseudomonas palustris DX-1 acyltransferase 3 YP_004108376.1 2161579 D 652103 CDS YP_004108377.1 316933395 10064248 2162861..2164363 1 NC_014834.1 PFAM: polysaccharide biosynthesis protein; KEGG: bbt:BBta_1044 hypothetical protein; polysaccharide biosynthesis protein 2164363 10064248 Rpdx1_2036 Rhodopseudomonas palustris DX-1 polysaccharide biosynthesis protein YP_004108377.1 2162861 D 652103 CDS YP_004108378.1 316933396 10064249 complement(2164455..2165345) 1 NC_014834.1 PFAM: glycosyl transferase family 2; KEGG: family 2 glycosyl transferase; glycosyl transferase family 2 protein 2165345 10064249 Rpdx1_2037 Rhodopseudomonas palustris DX-1 glycosyl transferase family 2 protein YP_004108378.1 2164455 R 652103 CDS YP_004108379.1 316933397 10064250 complement(2165368..2166468) 1 NC_014834.1 KEGG: bbt:BBta_1042 putative glycosyl transferase group 1; manually curated; PFAM: glycosyl transferase group 1; glycosyl transferase group 1 protein 2166468 10064250 Rpdx1_2038 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004108379.1 2165368 R 652103 CDS YP_004108380.1 316933398 10064251 2166948..2168393 1 NC_014834.1 KEGG: bbt:BBta_1039 hypothetical protein; hypothetical protein 2168393 10064251 Rpdx1_2039 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108380.1 2166948 D 652103 CDS YP_004108381.1 316933399 10064252 complement(2168385..2170133) 1 NC_014834.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; GMC oxidoreductase; KEGG: mes:Meso_2585 glucose-methanol-choline oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2170133 10064252 Rpdx1_2040 Rhodopseudomonas palustris DX-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004108381.1 2168385 R 652103 CDS YP_004108382.1 316933400 10064253 complement(2170143..2170403) 1 NC_014834.1 hypothetical protein 2170403 10064253 Rpdx1_2041 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108382.1 2170143 R 652103 CDS YP_004108383.1 316933401 10064254 complement(2170466..2172283) 1 NC_014834.1 PFAM: glycoside hydrolase family 10; KEGG: bbt:BBta_1040 hypothetical protein; glycoside hydrolase family protein 2172283 10064254 Rpdx1_2042 Rhodopseudomonas palustris DX-1 glycoside hydrolase family protein YP_004108383.1 2170466 R 652103 CDS YP_004108384.1 316933402 10064255 complement(2172372..2173511) 1 NC_014834.1 PFAM: acyltransferase 3; KEGG: rle:RL3831 putative O-acetyl transferase; acyltransferase 3 2173511 10064255 Rpdx1_2043 Rhodopseudomonas palustris DX-1 acyltransferase 3 YP_004108384.1 2172372 R 652103 CDS YP_004108385.1 316933403 10064256 2174028..2175941 1 NC_014834.1 KEGG: bph:Bphy_1672 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; amino acid adenylation domain-containing protein 2175941 10064256 Rpdx1_2044 Rhodopseudomonas palustris DX-1 amino acid adenylation domain-containing protein YP_004108385.1 2174028 D 652103 CDS YP_004108386.1 316933404 10064257 2175964..2184015 1 NC_014834.1 KEGG: bid:Bind_0846 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase ; Acyl transferase; phosphopantetheine-binding; aminotransferase class-III; condensation domain protein; amino acid adenylation domain-containing protein 2184015 10064257 Rpdx1_2045 Rhodopseudomonas palustris DX-1 amino acid adenylation domain-containing protein YP_004108386.1 2175964 D 652103 CDS YP_004108387.1 316933405 10064258 2184012..2186327 1 NC_014834.1 PFAM: condensation domain protein; Thioesterase; KEGG: bph:Bphy_1673 condensation domain-containing protein; condensation domain-containing protein 2186327 10064258 Rpdx1_2046 Rhodopseudomonas palustris DX-1 condensation domain-containing protein YP_004108387.1 2184012 D 652103 CDS YP_004108388.1 316933406 10064259 2186423..2187505 1 NC_014834.1 KEGG: msl:Msil_1245 platelet-activating factor acetylhydrolase plasma/intracellular isoform II; hypothetical protein 2187505 10064259 Rpdx1_2047 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108388.1 2186423 D 652103 CDS YP_004108389.1 316933407 10064260 2187521..2188225 1 NC_014834.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: mrd:Mrad2831_0013 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 2188225 10064260 Rpdx1_2048 Rhodopseudomonas palustris DX-1 4'-phosphopantetheinyl transferase YP_004108389.1 2187521 D 652103 CDS YP_004108390.1 316933408 10064261 2188428..2188616 1 NC_014834.1 KEGG: isc:IscW_ISCW017114 coagulation factor precursor, putative; hypothetical protein 2188616 10064261 Rpdx1_2049 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108390.1 2188428 D 652103 CDS YP_004108391.1 316933409 10064262 2188789..2189130 1 NC_014834.1 KEGG: ppg:PputGB1_2551 curlin-associated protein; hypothetical protein 2189130 10064262 Rpdx1_2050 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108391.1 2188789 D 652103 CDS YP_004108392.1 316933410 10064263 2189271..2189654 1 NC_014834.1 KEGG: dre:570672 si:dkey-90n12.3; hypothetical protein 2189654 10064263 Rpdx1_2051 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108392.1 2189271 D 652103 CDS YP_004108393.1 316933411 10064264 complement(2189882..2190757) 1 NC_014834.1 KEGG: mpo:Mpop_0030 curli production assembly/transport component CsgG; manually curated; PFAM: Curli production assembly/transport component CsgG; curli production assembly/transport component CsgG 2190757 10064264 Rpdx1_2052 Rhodopseudomonas palustris DX-1 curli production assembly/transport component CsgG YP_004108393.1 2189882 R 652103 CDS YP_004108394.1 316933412 10064265 complement(2190814..2191098) 1 NC_014834.1 PFAM: Curli production assembly/transport component CsgF; KEGG: pen:PSEEN2838 curli production assembly/transport component CsgF precursor; curli production assembly/transport component CsgF 2191098 10064265 Rpdx1_2053 Rhodopseudomonas palustris DX-1 curli production assembly/transport component CsgF YP_004108394.1 2190814 R 652103 CDS YP_004108395.1 316933413 10064266 complement(2191132..2191662) 1 NC_014834.1 KEGG: rso:RS03668 putative hemolysin-type protein; hypothetical protein 2191662 10064266 Rpdx1_2054 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108395.1 2191132 R 652103 CDS YP_004108396.1 316933414 10064267 complement(2191647..2191931) 1 NC_014834.1 KEGG: rsq:Rsph17025_3601 hypothetical protein; hypothetical protein 2191931 10064267 Rpdx1_2055 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108396.1 2191647 R 652103 CDS YP_004108397.1 316933415 10064268 2192586..2194337 1 NC_014834.1 PFAM: Curlin associated repeat protein; KEGG: mmi:MMAR_2591 PPE family protein, PPE8; curlin associated repeat-containing protein 2194337 10064268 Rpdx1_2056 Rhodopseudomonas palustris DX-1 curlin associated repeat-containing protein YP_004108397.1 2192586 D 652103 CDS YP_004108398.1 316933416 10064269 2194711..2195127 1 NC_014834.1 KEGG: sli:Slin_5326 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2195127 10064269 Rpdx1_2057 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004108398.1 2194711 D 652103 CDS YP_004108399.1 316933417 10064270 complement(2195522..2196007) 1 NC_014834.1 KEGG: bvi:Bcep1808_6712 hypothetical protein; hypothetical protein 2196007 10064270 Rpdx1_2058 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108399.1 2195522 R 652103 CDS YP_004108400.1 316933418 10064271 complement(2196398..2196880) 1 NC_014834.1 KEGG: csa:Csal_1569 Na(+)-translocating NADH-quinone reductase subunit A; hypothetical protein 2196880 10064271 Rpdx1_2059 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108400.1 2196398 R 652103 CDS YP_004108401.1 316933419 10064272 2197574..2198437 1 NC_014834.1 KEGG: ava:Ava_4835 hypothetical protein; hypothetical protein 2198437 10064272 Rpdx1_2060 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108401.1 2197574 D 652103 CDS YP_004108402.1 316933420 10064273 2198791..2200584 1 NC_014834.1 KEGG: rsq:Rsph17025_3294 hypothetical protein; hypothetical protein 2200584 10064273 Rpdx1_2061 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108402.1 2198791 D 652103 CDS YP_004108403.1 316933421 10064274 2200828..2202261 1 NC_014834.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2202261 10064274 Rpdx1_2062 Rhodopseudomonas palustris DX-1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_004108403.1 2200828 D 652103 CDS YP_004108404.1 316933422 10064275 2202330..2203826 1 NC_014834.1 KEGG: bra:BRADO0757 putative phosphomannomutase/phosphoglucomutase (PMM / PGM); PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphomannomutase 2203826 10064275 Rpdx1_2063 Rhodopseudomonas palustris DX-1 phosphomannomutase YP_004108404.1 2202330 D 652103 CDS YP_004108405.1 316933423 10064276 complement(2203946..2204626) 1 NC_014834.1 manually curated; KEGG: bbt:BBta_1078 hypothetical protein; hypothetical protein 2204626 10064276 Rpdx1_2064 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108405.1 2203946 R 652103 CDS YP_004108406.1 316933424 10064277 complement(2205037..2205711) 1 NC_014834.1 PFAM: peptidase M50; KEGG: nha:Nham_1519 peptidase M50; peptidase M50 2205711 10064277 Rpdx1_2065 Rhodopseudomonas palustris DX-1 peptidase M50 YP_004108406.1 2205037 R 652103 CDS YP_004108407.1 316933425 10064278 2206119..2207237 1 NC_014834.1 KEGG: mea:Mex_1p5255 serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; peptidase S1 and S6 chymotrypsin/Hap 2207237 10064278 Rpdx1_2066 Rhodopseudomonas palustris DX-1 peptidase S1 and S6 chymotrypsin/Hap YP_004108407.1 2206119 D 652103 CDS YP_004108408.1 316933426 10064279 2207307..2207519 1 NC_014834.1 KEGG: oca:OCAR_7483 hypothetical protein; hypothetical protein 2207519 10064279 Rpdx1_2067 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108408.1 2207307 D 652103 CDS YP_004108409.1 316933427 10064280 complement(2207726..2208574) 1 NC_014834.1 KEGG: mpo:Mpop_2641 transglutaminase domain protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; transglutaminase domain-containing protein 2208574 10064280 Rpdx1_2068 Rhodopseudomonas palustris DX-1 transglutaminase domain-containing protein YP_004108409.1 2207726 R 652103 CDS YP_004108410.1 316933428 10064281 complement(2208734..2210938) 1 NC_014834.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: msl:Msil_3793 glycogen debranching enzyme GlgX; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX 2210938 10064281 Rpdx1_2069 Rhodopseudomonas palustris DX-1 glycogen debranching protein GlgX YP_004108410.1 2208734 R 652103 CDS YP_004108411.1 316933429 10064282 complement(2211194..2211754) 1 NC_014834.1 KEGG: bra:BRADO3437 hypothetical protein; hypothetical protein 2211754 10064282 Rpdx1_2070 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108411.1 2211194 R 652103 CDS YP_004108412.1 316933430 10064283 complement(2211769..2212278) 1 NC_014834.1 PFAM: protein of unknown function DUF892; KEGG: bja:bll7648 hypothetical protein; hypothetical protein 2212278 10064283 Rpdx1_2071 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108412.1 2211769 R 652103 CDS YP_004108413.1 316933431 10064285 complement(2213573..2214481) 1 NC_014834.1 KEGG: mjl:Mjls_2587 TetR family transcriptional regulator; hypothetical protein 2214481 10064285 Rpdx1_2072 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108413.1 2213573 R 652103 CDS YP_004108414.1 316933432 10064286 complement(2214850..2216769) 1 NC_014834.1 KEGG: rhi:NGR_c22390 putative ATP-dependent hydrolase protein; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; AAA ATPase 2216769 10064286 Rpdx1_2073 Rhodopseudomonas palustris DX-1 AAA ATPase YP_004108414.1 2214850 R 652103 CDS YP_004108415.1 316933433 10064287 complement(2216794..2217129) 1 NC_014834.1 KEGG: mch:Mchl_0986 hypothetical protein; hypothetical protein 2217129 10064287 Rpdx1_2074 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108415.1 2216794 R 652103 CDS YP_004108416.1 316933434 10064288 2218320..2218601 1 NC_014834.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: mno:Mnod_7736 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2218601 10064288 Rpdx1_2075 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004108416.1 2218320 D 652103 CDS YP_004108417.1 316933435 10064290 2219256..2219972 1 NC_014834.1 KEGG: oca:OCAR_7680 hypothetical protein; hypothetical protein 2219972 10064290 Rpdx1_2077 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108417.1 2219256 D 652103 CDS YP_004108418.1 316933436 10064291 2220681..2221865 1 NC_014834.1 KEGG: azl:AZL_d04780 similar to UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase-like protein 2221865 10064291 Rpdx1_2078 Rhodopseudomonas palustris DX-1 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase-like protein YP_004108418.1 2220681 D 652103 CDS YP_004108419.1 316933437 10064292 complement(2221862..2222149) 1 NC_014834.1 KEGG: tpd:Teth39_1006 hypothetical protein; hypothetical protein 2222149 10064292 Rpdx1_2079 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108419.1 2221862 R 652103 CDS YP_004108420.1 316933438 10064293 complement(2222578..2223273) 1 NC_014834.1 KEGG: btl:BALH_4300 collagen-like protein; hypothetical protein 2223273 10064293 Rpdx1_2080 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108420.1 2222578 R 652103 CDS YP_004108421.1 316933439 10064294 2224130..2229205 1 NC_014834.1 PFAM: RTX domain protein; Hemolysin-type calcium-binding region; KEGG: mlo:mll1028 rhizobiocin RzcA; RTX domain-containing protein 2229205 10064294 Rpdx1_2081 Rhodopseudomonas palustris DX-1 RTX domain-containing protein YP_004108421.1 2224130 D 652103 CDS YP_004108422.1 316933440 10064295 2229236..2231014 1 NC_014834.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; KEGG: mlo:mll1027 rhizobiocin secretion protein RspD; SMART: AAA ATPase; type I secretion system ATPase 2231014 10064295 Rpdx1_2082 Rhodopseudomonas palustris DX-1 type I secretion system ATPase YP_004108422.1 2229236 D 652103 CDS YP_004108423.1 316933441 10064296 2230989..2232356 1 NC_014834.1 KEGG: mpo:Mpop_2544 type I secretion membrane fusion protein, HlyD family; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; HlyD family type I secretion membrane fusion protein 2232356 10064296 Rpdx1_2083 Rhodopseudomonas palustris DX-1 HlyD family type I secretion membrane fusion protein YP_004108423.1 2230989 D 652103 CDS YP_004108424.1 316933442 10064298 2233968..2234687 1 NC_014834.1 KEGG: nwi:Nwi_0627 LuxR family transcriptional regulator; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; autoinducer-binding domain-containing protein 2234687 10064298 Rpdx1_2085 Rhodopseudomonas palustris DX-1 autoinducer-binding domain-containing protein YP_004108424.1 2233968 D 652103 CDS YP_004108425.1 316933443 10064299 2234775..2235407 1 NC_014834.1 PFAM: autoinducer synthesis protein; KEGG: nwi:Nwi_0626 autoinducer synthesis protein; autoinducer synthesis protein 2235407 10064299 Rpdx1_2086 Rhodopseudomonas palustris DX-1 autoinducer synthesis protein YP_004108425.1 2234775 D 652103 CDS YP_004108426.1 316933444 10064300 complement(2235918..2236343) 1 NC_014834.1 manually curated; KEGG: bja:blr6106 hypothetical protein; hypothetical protein 2236343 10064300 Rpdx1_2087 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108426.1 2235918 R 652103 CDS YP_004108427.1 316933445 10064302 complement(2237308..2237751) 1 NC_014834.1 PFAM: nuclease (SNase domain protein); KEGG: rle:RL2121 putative transmembrane protein; nuclease 2237751 10064302 Rpdx1_2089 Rhodopseudomonas palustris DX-1 nuclease YP_004108427.1 2237308 R 652103 CDS YP_004108428.1 316933446 10064303 complement(2237762..2237965) 1 NC_014834.1 KEGG: nml:Namu_2040 3-oxoacyl-(acyl-carrier-protein) synthase III; hypothetical protein 2237965 10064303 Rpdx1_2090 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108428.1 2237762 R 652103 CDS YP_004108429.1 316933447 10064304 complement(2238054..2239205) 1 NC_014834.1 KEGG: jan:Jann_1534 response regulator receiver domain-containing protein; response regulator receiver domain-containing protein 2239205 10064304 Rpdx1_2091 Rhodopseudomonas palustris DX-1 response regulator receiver domain-containing protein YP_004108429.1 2238054 R 652103 CDS YP_004108430.1 316933448 10064306 complement(2239657..2240637) 1 NC_014834.1 manually curated; KEGG: jan:Jann_1532 hypothetical protein; hypothetical protein 2240637 10064306 Rpdx1_2093 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108430.1 2239657 R 652103 CDS YP_004108431.1 316933449 10064307 2240705..2240971 1 NC_014834.1 PFAM: transposase IS3/IS911 family protein; KEGG: oan:Oant_4528 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2240971 10064307 Rpdx1_2094 Rhodopseudomonas palustris DX-1 transposase IS3/IS911 family protein YP_004108431.1 2240705 D 652103 CDS YP_004108432.1 316933450 10064308 2240965..2241894 1 NC_014834.1 PFAM: Integrase catalytic region; KEGG: oan:Oant_4683 integrase catalytic region; Integrase catalytic subunit 2241894 10064308 Rpdx1_2095 Rhodopseudomonas palustris DX-1 Integrase catalytic subunit YP_004108432.1 2240965 D 652103 CDS YP_004108433.1 316933451 10064309 complement(2241779..2243905) 1 NC_014834.1 KEGG: pha:PSHAa2353 hypothetical protein; hypothetical protein 2243905 10064309 Rpdx1_2096 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108433.1 2241779 R 652103 CDS YP_004108434.1 316933452 10064311 complement(2245596..2247872) 1 NC_014834.1 PFAM: Protein of unknown function DUF2235; KEGG: nha:Nham_0079 hypothetical protein; hypothetical protein 2247872 10064311 Rpdx1_2098 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108434.1 2245596 R 652103 CDS YP_004108435.1 316933453 10064313 2249480..2249728 1 NC_014834.1 KEGG: bid:Bind_0645 hypothetical protein; hypothetical protein 2249728 10064313 Rpdx1_2100 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108435.1 2249480 D 652103 CDS YP_004108436.1 316933454 10064315 complement(2250337..2250708) 1 NC_014834.1 KEGG: bja:blr6106 hypothetical protein; hypothetical protein 2250708 10064315 Rpdx1_2102 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108436.1 2250337 R 652103 CDS YP_004108437.1 316933455 10064316 2250928..2251527 1 NC_014834.1 KEGG: cya:CYA_2444 hypothetical protein; hypothetical protein 2251527 10064316 Rpdx1_2103 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108437.1 2250928 D 652103 CDS YP_004108438.1 316933456 10064318 2251854..2252921 1 NC_014834.1 manually curated; KEGG: oca:OCAR_7650 hypothetical protein; hypothetical protein 2252921 10064318 Rpdx1_2105 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108438.1 2251854 D 652103 CDS YP_004108439.1 316933457 10064320 2253415..2254083 1 NC_014834.1 KEGG: fsu:Fisuc_1342 hypothetical protein; hypothetical protein 2254083 10064320 Rpdx1_2107 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108439.1 2253415 D 652103 CDS YP_004108440.1 316933458 10064321 2254108..2255214 1 NC_014834.1 KEGG: hmu:Hmuk_1375 hypothetical protein; hypothetical protein 2255214 10064321 Rpdx1_2108 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108440.1 2254108 D 652103 CDS YP_004108441.1 316933459 10064323 2256558..2257397 1 NC_014834.1 KEGG: nha:Nham_4291 hypothetical protein; hypothetical protein 2257397 10064323 Rpdx1_2110 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108441.1 2256558 D 652103 CDS YP_004108442.1 316933460 10064324 2257394..2258473 1 NC_014834.1 PFAM: Domain of unknown function DUF1814; KEGG: nha:Nham_4292 hypothetical protein; hypothetical protein 2258473 10064324 Rpdx1_2111 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108442.1 2257394 D 652103 CDS YP_004108443.1 316933461 10064325 2258470..2259327 1 NC_014834.1 KEGG: sjp:SJA_C1-20340 hypothetical protein; hypothetical protein 2259327 10064325 Rpdx1_2112 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108443.1 2258470 D 652103 CDS YP_004108444.1 316933462 10064326 2259324..2259902 1 NC_014834.1 KEGG: sjp:SJA_C1-20350 hypothetical protein; hypothetical protein 2259902 10064326 Rpdx1_2113 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108444.1 2259324 D 652103 CDS YP_004108445.1 316933463 10064327 2259904..2263305 1 NC_014834.1 PFAM: UvrD/REP helicase; protein of unknown function DUF955; KEGG: sjp:SJA_C1-20360 putative ATP-dependent DNA helicase; UvrD/REP helicase 2263305 10064327 Rpdx1_2114 Rhodopseudomonas palustris DX-1 UvrD/REP helicase YP_004108445.1 2259904 D 652103 CDS YP_004108446.1 316933464 10064328 2263387..2264133 1 NC_014834.1 KEGG: hba:Hbal_0676 hypothetical protein; hypothetical protein 2264133 10064328 Rpdx1_2115 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108446.1 2263387 D 652103 CDS YP_004108447.1 316933465 10064329 2264108..2265280 1 NC_014834.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: sjp:SJA_C1-20380 UBA/ThiF-type NAD/FAD binding fold protein; UBA/THIF-type NAD/FAD-binding protein 2265280 10064329 Rpdx1_2116 Rhodopseudomonas palustris DX-1 UBA/THIF-type NAD/FAD-binding protein YP_004108447.1 2264108 D 652103 CDS YP_004108448.1 316933466 10064330 2265277..2265717 1 NC_014834.1 KEGG: sjp:SJA_C1-20390 hypothetical protein; hypothetical protein 2265717 10064330 Rpdx1_2117 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108448.1 2265277 D 652103 CDS YP_004108449.1 316933467 10064331 2265996..2266232 1 NC_014834.1 PFAM: Protein of unknown function DUF2158; KEGG: avn:Avin_20850 hypothetical protein; hypothetical protein 2266232 10064331 Rpdx1_2118 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108449.1 2265996 D 652103 CDS YP_004108450.1 316933468 10064332 2266244..2269348 1 NC_014834.1 KEGG: scb:SCAB_29231 putative helicase; PFAM: DEAD/DEAH box helicase domain protein; peptidase C14 caspase catalytic subunit p20; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 2269348 10064332 Rpdx1_2119 Rhodopseudomonas palustris DX-1 DEAD/DEAH box helicase YP_004108450.1 2266244 D 652103 CDS YP_004108451.1 316933469 10064333 complement(2270116..2270871) 1 NC_014834.1 KEGG: cin:100177270 similar to predicted protein; hypothetical protein 2270871 10064333 Rpdx1_2120 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108451.1 2270116 R 652103 CDS YP_004108452.1 316933470 10064334 complement(2270873..2272330) 1 NC_014834.1 PFAM: MaoC domain protein dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: ttu:TERTU_2202 modular polyketide synthase, type I PKS; MaoC domain-containing protein dehydratase 2272330 10064334 Rpdx1_2121 Rhodopseudomonas palustris DX-1 MaoC domain-containing protein dehydratase YP_004108452.1 2270873 R 652103 CDS YP_004108453.1 316933471 10064335 complement(2272357..2273472) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: gvi:glr1065 glycosyltransferase; glycosyl transferase group 1 protein 2273472 10064335 Rpdx1_2122 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004108453.1 2272357 R 652103 CDS YP_004108454.1 316933472 10064336 complement(2273469..2274314) 1 NC_014834.1 KEGG: glo:Glov_1521 hypothetical protein; hypothetical protein 2274314 10064336 Rpdx1_2123 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108454.1 2273469 R 652103 CDS YP_004108455.1 316933473 10064337 complement(2274349..2275539) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: sus:Acid_4714 thioesterase; glycosyl transferase group 1 protein 2275539 10064337 Rpdx1_2124 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004108455.1 2274349 R 652103 CDS YP_004108456.1 316933474 10064338 complement(2275539..2276729) 1 NC_014834.1 PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; KEGG: cth:Cthe_1905 glycosyl transferase family protein; glycosyl transferase family protein 2276729 10064338 Rpdx1_2125 Rhodopseudomonas palustris DX-1 glycosyl transferase family protein YP_004108456.1 2275539 R 652103 CDS YP_004108457.1 316933475 10064339 complement(2276729..2278663) 1 NC_014834.1 KEGG: sus:Acid_4716 FkbH like protein; TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; PFAM: phosphopantetheine-binding; FkbH-like protein 2278663 10064339 Rpdx1_2126 Rhodopseudomonas palustris DX-1 FkbH-like protein YP_004108457.1 2276729 R 652103 CDS YP_004108458.1 316933476 10064340 complement(2278660..2279928) 1 NC_014834.1 PFAM: Glycosyltransferase 28 domain; KEGG: sit:TM1040_3688 hypothetical protein; glycosyltransferase family 28 protein 2279928 10064340 Rpdx1_2127 Rhodopseudomonas palustris DX-1 glycosyltransferase family 28 protein YP_004108458.1 2278660 R 652103 CDS YP_004108459.1 316933477 10064342 2281643..2290099 1 NC_014834.1 manually curated; TIGRFAM: YD repeat protein; KEGG: cja:CJA_2623 rhs family protein; PFAM: YD repeat-containing protein; YD repeat-containing protein 2290099 10064342 Rpdx1_2129 Rhodopseudomonas palustris DX-1 YD repeat-containing protein YP_004108459.1 2281643 D 652103 CDS YP_004108460.1 316933478 10064343 2290400..2290669 1 NC_014834.1 KEGG: rba:RB574 hypothetical protein; hypothetical protein 2290669 10064343 Rpdx1_2130 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108460.1 2290400 D 652103 CDS YP_004108461.1 316933479 10064344 complement(2290996..2292180) 1 NC_014834.1 PFAM: integrase family protein; KEGG: msl:Msil_2093 integrase family protein; integrase family protein 2292180 10064344 Rpdx1_2131 Rhodopseudomonas palustris DX-1 integrase family protein YP_004108461.1 2290996 R 652103 CDS YP_004108462.1 316933480 10064346 2292559..2293329 1 NC_014834.1 KEGG: bbt:BBta_3799 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 2293329 10064346 Rpdx1_2132 Rhodopseudomonas palustris DX-1 exodeoxyribonuclease III Xth YP_004108462.1 2292559 D 652103 CDS YP_004108463.1 316933481 10064347 complement(2293338..2294114) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xau:Xaut_0903 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2294114 10064347 Rpdx1_2133 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004108463.1 2293338 R 652103 CDS YP_004108464.1 316933482 10064348 complement(2294129..2294956) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pla:Plav_0158 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2294956 10064348 Rpdx1_2134 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004108464.1 2294129 R 652103 CDS YP_004108465.1 316933483 10064349 complement(2295105..2295527) 1 NC_014834.1 PFAM: MaoC domain protein dehydratase; KEGG: pla:Plav_0157 dehydratase; MaoC domain-containing protein dehydratase 2295527 10064349 Rpdx1_2135 Rhodopseudomonas palustris DX-1 MaoC domain-containing protein dehydratase YP_004108465.1 2295105 R 652103 CDS YP_004108466.1 316933484 10064350 complement(2295524..2295970) 1 NC_014834.1 KEGG: pla:Plav_0156 hypothetical protein; hypothetical protein 2295970 10064350 Rpdx1_2136 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108466.1 2295524 R 652103 CDS YP_004108467.1 316933485 10064351 complement(2295981..2297165) 1 NC_014834.1 PFAM: Thiolase-like; KEGG: mpt:Mpe_A0178 lipid-transfer protein; Thiolase-like protein 2297165 10064351 Rpdx1_2137 Rhodopseudomonas palustris DX-1 Thiolase-like protein YP_004108467.1 2295981 R 652103 CDS YP_004108468.1 316933486 10064352 2297292..2298074 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: sus:Acid_5697 TetR family transcriptional regulator; TetR family transcriptional regulator 2298074 10064352 Rpdx1_2138 Rhodopseudomonas palustris DX-1 TetR family transcriptional regulator YP_004108468.1 2297292 D 652103 CDS YP_004108469.1 316933487 10064353 2297992..2299548 1 NC_014834.1 KEGG: ctt:CtCNB1_1709 long-chain-fatty-acid--CoA ligase; manually curated; PFAM: AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2299548 10064353 Rpdx1_2139 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004108469.1 2297992 D 652103 CDS YP_004108470.1 316933488 10064354 2299704..2301086 1 NC_014834.1 KEGG: bvi:Bcep1808_1832 hypothetical protein; hypothetical protein 2301086 10064354 Rpdx1_2140 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108470.1 2299704 D 652103 CDS YP_004108471.1 316933489 10064355 2301627..2302979 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: dsh:Dshi_1404 branched-chain amino acid ABC transporter; extracellular ligand-binding receptor 2302979 10064355 Rpdx1_2141 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004108471.1 2301627 D 652103 CDS YP_004108472.1 316933490 10064356 2303230..2304237 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: sit:TM1040_1512 inner-membrane translocator; inner-membrane translocator 2304237 10064356 Rpdx1_2142 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004108472.1 2303230 D 652103 CDS YP_004108473.1 316933491 10064357 2304242..2305462 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: sit:TM1040_1513 inner-membrane translocator; inner-membrane translocator 2305462 10064357 Rpdx1_2143 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004108473.1 2304242 D 652103 CDS YP_004108474.1 316933492 10064358 2305459..2306229 1 NC_014834.1 KEGG: jan:Jann_1384 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2306229 10064358 Rpdx1_2144 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108474.1 2305459 D 652103 CDS YP_004108475.1 316933493 10064359 2306226..2306978 1 NC_014834.1 KEGG: jan:Jann_1385 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2306978 10064359 Rpdx1_2145 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108475.1 2306226 D 652103 CDS YP_004108476.1 316933494 10064361 complement(2307454..2308131) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bja:blr5456 transcriptional regulatory protein; regulatory protein TetR 2308131 10064361 Rpdx1_2147 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004108476.1 2307454 R 652103 CDS YP_004108477.1 316933495 10064362 2308373..2309605 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO3035 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2309605 10064362 Rpdx1_2148 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004108477.1 2308373 D 652103 CDS YP_004108478.1 316933496 10064363 2309757..2310815 1 NC_014834.1 PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO3036 putative aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2310815 10064363 Rpdx1_2149 Rhodopseudomonas palustris DX-1 aminoglycoside phosphotransferase YP_004108478.1 2309757 D 652103 CDS YP_004108479.1 316933497 10064364 complement(2311147..2311932) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO3041 putative short-chain dehydrogenase/reductase SDR family protein; short-chain dehydrogenase/reductase SDR 2311932 10064364 Rpdx1_2150 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004108479.1 2311147 R 652103 CDS YP_004108480.1 316933498 10064365 2312088..2312843 1 NC_014834.1 PFAM: Phosphoglycerate mutase; KEGG: bja:bll5443 hypothetical protein; phosphoglycerate mutase 2312843 10064365 Rpdx1_2151 Rhodopseudomonas palustris DX-1 phosphoglycerate mutase YP_004108480.1 2312088 D 652103 CDS YP_004108481.1 316933499 10064366 2312997..2313764 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO3043 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2313764 10064366 Rpdx1_2152 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004108481.1 2312997 D 652103 CDS YP_004108482.1 316933500 10064367 complement(2314052..2315278) 1 NC_014834.1 PFAM: beta-lactamase; KEGG: bja:blr5441 hypothetical protein; beta-lactamase 2315278 10064367 Rpdx1_2153 Rhodopseudomonas palustris DX-1 beta-lactamase YP_004108482.1 2314052 R 652103 CDS YP_004108483.1 316933501 10064368 2315465..2316655 1 NC_014834.1 KEGG: bbt:BBta_5072 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; translation elongation factor Tu 2316655 10064368 Rpdx1_2154 Rhodopseudomonas palustris DX-1 translation elongation factor Tu YP_004108483.1 2315465 D 652103 CDS YP_004108484.1 316933502 10064369 2316775..2317089 1 NC_014834.1 KEGG: xau:Xaut_3357 hypothetical protein; hypothetical protein 2317089 10064369 Rpdx1_2155 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108484.1 2316775 D 652103 CDS YP_004108485.1 316933503 10064371 complement(2317323..2318582) 1 NC_014834.1 KEGG: mei:Msip34_1578 hypothetical protein; hypothetical protein 2318582 10064371 Rpdx1_2156 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108485.1 2317323 R 652103 CDS YP_004108486.1 316933504 10064372 complement(2318661..2320943) 1 NC_014834.1 KEGG: nha:Nham_3719 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 2320943 10064372 Rpdx1_2157 Rhodopseudomonas palustris DX-1 TonB-dependent siderophore receptor YP_004108486.1 2318661 R 652103 CDS YP_004108487.1 316933505 10064373 2321770..2321958 1 NC_014834.1 KEGG: bja:bsl5417 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; preprotein translocase subunit SecE 2321958 10064373 Rpdx1_2158 Rhodopseudomonas palustris DX-1 preprotein translocase subunit SecE YP_004108487.1 2321770 D 652103 CDS YP_004108488.1 316933506 10064374 2321976..2322506 1 NC_014834.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; KEGG: nha:Nham_1526 transcription antitermination protein NusG; SMART: NGN domain protein; KOW domain protein; NusG antitermination factor 2322506 10064374 Rpdx1_2159 Rhodopseudomonas palustris DX-1 NusG antitermination factor YP_004108488.1 2321976 D 652103 CDS YP_004108489.1 316933507 10064375 2322662..2323090 1 NC_014834.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: bja:bll5415 50S ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 2323090 10064375 Rpdx1_2160 Rhodopseudomonas palustris DX-1 50S ribosomal protein L11 YP_004108489.1 2322662 D 652103 CDS YP_004108490.1 316933508 10064376 2323097..2323786 1 NC_014834.1 KEGG: bbt:BBta_5086 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; 50S ribosomal protein L1 2323786 10064376 Rpdx1_2161 Rhodopseudomonas palustris DX-1 50S ribosomal protein L1 YP_004108490.1 2323097 D 652103 CDS YP_004108491.1 316933509 10064377 2323891..2324850 1 NC_014834.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bra:BRADO3050 putative glyoxylate reductase (glycolate reductase); D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2324850 10064377 Rpdx1_2162 Rhodopseudomonas palustris DX-1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004108491.1 2323891 D 652103 CDS YP_004108492.1 316933510 10064378 2325624..2326142 1 NC_014834.1 PFAM: ribosomal protein L10; KEGG: nha:Nham_1529 50S ribosomal protein L10; 50S ribosomal protein L10 2326142 10064378 Rpdx1_2163 Rhodopseudomonas palustris DX-1 50S ribosomal protein L10 YP_004108492.1 2325624 D 652103 CDS YP_004108493.1 316933511 10064379 2326198..2326572 1 NC_014834.1 KEGG: nha:Nham_1530 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 2326572 10064379 Rpdx1_2164 Rhodopseudomonas palustris DX-1 50S ribosomal protein L7/L12 YP_004108493.1 2326198 D 652103 CDS YP_004108494.1 316933512 10064380 2327040..2331164 1 NC_014834.1 KEGG: bra:BRADO3054 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; DNA-directed RNA polymerase subunit beta 2331164 10064380 Rpdx1_2165 Rhodopseudomonas palustris DX-1 DNA-directed RNA polymerase subunit beta YP_004108494.1 2327040 D 652103 CDS YP_004108495.1 316933513 10064381 2331311..2335513 1 NC_014834.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: nha:Nham_1532 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 2335513 10064381 Rpdx1_2166 Rhodopseudomonas palustris DX-1 DNA-directed RNA polymerase subunit beta' YP_004108495.1 2331311 D 652103 CDS YP_004108496.1 316933514 10064382 2335817..2337880 1 NC_014834.1 KEGG: bbt:BBta_5079 hypothetical protein; manually curated; PFAM: amine oxidase; Methyltransferase type 11; amine oxidase 2337880 10064382 Rpdx1_2167 Rhodopseudomonas palustris DX-1 amine oxidase YP_004108496.1 2335817 D 652103 CDS YP_004108497.1 316933515 10064383 2337997..2340096 1 NC_014834.1 KEGG: bbt:BBta_5078 putative ABC transporter, ATPase and permease components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein 2340096 10064383 Rpdx1_2168 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108497.1 2337997 D 652103 CDS YP_004108498.1 316933516 10064384 complement(2340250..2340702) 1 NC_014834.1 KEGG: nha:Nham_3666 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 2340702 10064384 Rpdx1_2169 Rhodopseudomonas palustris DX-1 MarR family transcriptional regulator YP_004108498.1 2340250 R 652103 CDS YP_004108499.1 316933517 10064385 2340845..2341273 1 NC_014834.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_5280 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase 2341273 10064385 Rpdx1_2170 Rhodopseudomonas palustris DX-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_004108499.1 2340845 D 652103 CDS YP_004108500.1 316933518 10064386 2341523..2342731 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: smd:Smed_3859 major facilitator transporter; major facilitator superfamily protein 2342731 10064386 Rpdx1_2171 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004108500.1 2341523 D 652103 CDS YP_004108501.1 316933519 10064389 complement(2343775..2344470) 1 NC_014834.1 PFAM: O-methyltransferase family 3; KEGG: msl:Msil_0886 O-methyltransferase family 3; O-methyltransferase family protein 2344470 10064389 Rpdx1_2174 Rhodopseudomonas palustris DX-1 O-methyltransferase family protein YP_004108501.1 2343775 R 652103 CDS YP_004108502.1 316933520 10064390 2344607..2345428 1 NC_014834.1 KEGG: msl:Msil_0885 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2345428 10064390 Rpdx1_2175 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004108502.1 2344607 D 652103 CDS YP_004108503.1 316933521 10064392 complement(2346278..2347195) 1 NC_014834.1 KEGG: bja:blr2658 hypothetical protein; hypothetical protein 2347195 10064392 Rpdx1_2177 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108503.1 2346278 R 652103 CDS YP_004108504.1 316933522 10064393 2348096..2348467 1 NC_014834.1 KEGG: nha:Nham_1540 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; 30S ribosomal protein S12 2348467 10064393 Rpdx1_2178 Rhodopseudomonas palustris DX-1 30S ribosomal protein S12 YP_004108504.1 2348096 D 652103 CDS YP_004108505.1 316933523 10064394 2348483..2348953 1 NC_014834.1 KEGG: nwi:Nwi_1360 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; 30S ribosomal protein S7 2348953 10064394 Rpdx1_2179 Rhodopseudomonas palustris DX-1 30S ribosomal protein S7 YP_004108505.1 2348483 D 652103 CDS YP_004108506.1 316933524 10064395 2348984..2351056 1 NC_014834.1 KEGG: bbt:BBta_5073 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; translation elongation factor G 2351056 10064395 Rpdx1_2180 Rhodopseudomonas palustris DX-1 translation elongation factor G YP_004108506.1 2348984 D 652103 CDS YP_004108507.1 316933525 10064396 2351095..2352285 1 NC_014834.1 KEGG: bbt:BBta_5072 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; translation elongation factor Tu 2352285 10064396 Rpdx1_2181 Rhodopseudomonas palustris DX-1 translation elongation factor Tu YP_004108507.1 2351095 D 652103 CDS YP_004108508.1 316933526 10064397 2352374..2352682 1 NC_014834.1 KEGG: nha:Nham_1544 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; 30S ribosomal protein S10 2352682 10064397 Rpdx1_2182 Rhodopseudomonas palustris DX-1 30S ribosomal protein S10 YP_004108508.1 2352374 D 652103 CDS YP_004108509.1 316933527 10064398 2352733..2353458 1 NC_014834.1 KEGG: bja:bll5400 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; 50S ribosomal protein L3 2353458 10064398 Rpdx1_2183 Rhodopseudomonas palustris DX-1 50S ribosomal protein L3 YP_004108509.1 2352733 D 652103 CDS YP_004108510.1 316933528 10064399 2353460..2354080 1 NC_014834.1 PFAM: ribosomal protein L4/L1e; KEGG: bja:bll5399 50S ribosomal protein L4; 50S ribosomal protein L4 2354080 10064399 Rpdx1_2184 Rhodopseudomonas palustris DX-1 50S ribosomal protein L4 YP_004108510.1 2353460 D 652103 CDS YP_004108511.1 316933529 10064400 2354077..2354376 1 NC_014834.1 PFAM: Ribosomal protein L25/L23; KEGG: bbt:BBta_5068 50S ribosomal protein L23; 50S ribosomal protein L25 2354376 10064400 Rpdx1_2185 Rhodopseudomonas palustris DX-1 50S ribosomal protein L25 YP_004108511.1 2354077 D 652103 CDS YP_004108512.1 316933530 10064401 2354390..2355226 1 NC_014834.1 KEGG: oca:OCAR_5680 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; 50S ribosomal protein L2 2355226 10064401 Rpdx1_2186 Rhodopseudomonas palustris DX-1 50S ribosomal protein L2 YP_004108512.1 2354390 D 652103 CDS YP_004108513.1 316933531 10064402 2355238..2355516 1 NC_014834.1 KEGG: bbt:BBta_5066 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; 30S ribosomal protein S19 2355516 10064402 Rpdx1_2187 Rhodopseudomonas palustris DX-1 30S ribosomal protein S19 YP_004108513.1 2355238 D 652103 CDS YP_004108514.1 316933532 10064403 2355527..2355910 1 NC_014834.1 KEGG: oca:OCAR_5682 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; 50S ribosomal protein L22 2355910 10064403 Rpdx1_2188 Rhodopseudomonas palustris DX-1 50S ribosomal protein L22 YP_004108514.1 2355527 D 652103 CDS YP_004108515.1 316933533 10064404 2355933..2356640 1 NC_014834.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: bja:bll5394 30S ribosomal protein S3; SMART: KH domain protein; 30S ribosomal protein S3 2356640 10064404 Rpdx1_2189 Rhodopseudomonas palustris DX-1 30S ribosomal protein S3 YP_004108515.1 2355933 D 652103 CDS YP_004108516.1 316933534 10064405 2356673..2357086 1 NC_014834.1 KEGG: bra:BRADO3073 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 2357086 10064405 Rpdx1_2190 Rhodopseudomonas palustris DX-1 50S ribosomal protein L16 YP_004108516.1 2356673 D 652103 CDS YP_004108517.1 316933535 10064406 2357092..2357301 1 NC_014834.1 KEGG: bbt:BBta_5062 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; 50S ribosomal protein L29 2357301 10064406 Rpdx1_2191 Rhodopseudomonas palustris DX-1 50S ribosomal protein L29 YP_004108517.1 2357092 D 652103 CDS YP_004108518.1 316933536 10064407 2357314..2357562 1 NC_014834.1 KEGG: nha:Nham_1554 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; 30S ribosomal protein S17 2357562 10064407 Rpdx1_2192 Rhodopseudomonas palustris DX-1 30S ribosomal protein S17 YP_004108518.1 2357314 D 652103 CDS YP_004108519.1 316933537 10064408 2357626..2357994 1 NC_014834.1 KEGG: bbt:BBta_5060 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; 50S ribosomal protein L14 2357994 10064408 Rpdx1_2193 Rhodopseudomonas palustris DX-1 50S ribosomal protein L14 YP_004108519.1 2357626 D 652103 CDS YP_004108520.1 316933538 10064409 2357994..2358308 1 NC_014834.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: bja:bll5389 50S ribosomal protein L24; SMART: KOW domain protein; 50S ribosomal protein L24 2358308 10064409 Rpdx1_2194 Rhodopseudomonas palustris DX-1 50S ribosomal protein L24 YP_004108520.1 2357994 D 652103 CDS YP_004108521.1 316933539 10064410 2358301..2358858 1 NC_014834.1 KEGG: bbt:BBta_5058 50S ribosomal protein L5; 50S ribosomal protein L5 2358858 10064410 Rpdx1_2195 Rhodopseudomonas palustris DX-1 50S ribosomal protein L5 YP_004108521.1 2358301 D 652103 CDS YP_004108522.1 316933540 10064411 2358902..2359207 1 NC_014834.1 PFAM: ribosomal protein S14; KEGG: bbt:BBta_5057 30S ribosomal protein S14; 30S ribosomal protein S14 2359207 10064411 Rpdx1_2196 Rhodopseudomonas palustris DX-1 30S ribosomal protein S14 YP_004108522.1 2358902 D 652103 CDS YP_004108523.1 316933541 10064412 2359220..2359618 1 NC_014834.1 PFAM: ribosomal protein S8; KEGG: nwi:Nwi_1378 30S ribosomal protein S8; 30S ribosomal protein S8 2359618 10064412 Rpdx1_2197 Rhodopseudomonas palustris DX-1 30S ribosomal protein S8 YP_004108523.1 2359220 D 652103 CDS YP_004108524.1 316933542 10064413 2359731..2360264 1 NC_014834.1 KEGG: bbt:BBta_5055 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 2360264 10064413 Rpdx1_2198 Rhodopseudomonas palustris DX-1 50S ribosomal protein L6 YP_004108524.1 2359731 D 652103 CDS YP_004108525.1 316933543 10064414 2360276..2360638 1 NC_014834.1 KEGG: nwi:Nwi_1380 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; 50S ribosomal protein L18 2360638 10064414 Rpdx1_2199 Rhodopseudomonas palustris DX-1 50S ribosomal protein L18 YP_004108525.1 2360276 D 652103 CDS YP_004108526.1 316933544 10064415 2360699..2361274 1 NC_014834.1 KEGG: nwi:Nwi_1381 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; 30S ribosomal protein S5 2361274 10064415 Rpdx1_2200 Rhodopseudomonas palustris DX-1 30S ribosomal protein S5 YP_004108526.1 2360699 D 652103 CDS YP_004108527.1 316933545 10064416 2361334..2361528 1 NC_014834.1 KEGG: nwi:Nwi_1382 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; 50S ribosomal protein L30 2361528 10064416 Rpdx1_2201 Rhodopseudomonas palustris DX-1 50S ribosomal protein L30 YP_004108527.1 2361334 D 652103 CDS YP_004108528.1 316933546 10064417 2361541..2362026 1 NC_014834.1 TIGRFAM: ribosomal protein L15; KEGG: bbt:BBta_5051 50S ribosomal protein L15; 50S ribosomal protein L15 2362026 10064417 Rpdx1_2202 Rhodopseudomonas palustris DX-1 50S ribosomal protein L15 YP_004108528.1 2361541 D 652103 CDS YP_004108529.1 316933547 10064418 2362179..2363510 1 NC_014834.1 KEGG: bja:bll5380 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; preprotein translocase subunit SecY 2363510 10064418 Rpdx1_2203 Rhodopseudomonas palustris DX-1 preprotein translocase subunit SecY YP_004108529.1 2362179 D 652103 CDS YP_004108530.1 316933548 10064419 2363507..2364646 1 NC_014834.1 KEGG: oca:OCAR_5698 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase 2364646 10064419 Rpdx1_2204 Rhodopseudomonas palustris DX-1 adenylate kinase YP_004108530.1 2363507 D 652103 CDS YP_004108531.1 316933549 10064420 2364831..2365199 1 NC_014834.1 KEGG: oca:OCAR_5699 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; 30S ribosomal protein S13 2365199 10064420 Rpdx1_2205 Rhodopseudomonas palustris DX-1 30S ribosomal protein S13 YP_004108531.1 2364831 D 652103 CDS YP_004108532.1 316933550 10064421 2365329..2365718 1 NC_014834.1 KEGG: bbt:BBta_5047 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; 30S ribosomal protein S11 2365718 10064421 Rpdx1_2206 Rhodopseudomonas palustris DX-1 30S ribosomal protein S11 YP_004108532.1 2365329 D 652103 CDS YP_004108533.1 316933551 10064422 2365851..2366870 1 NC_014834.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: bbt:BBta_5046 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 2366870 10064422 Rpdx1_2207 Rhodopseudomonas palustris DX-1 DNA-directed RNA polymerase subunit alpha YP_004108533.1 2365851 D 652103 CDS YP_004108534.1 316933552 10064423 2367027..2367446 1 NC_014834.1 KEGG: bbt:BBta_5045 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; 50S ribosomal protein L17 2367446 10064423 Rpdx1_2208 Rhodopseudomonas palustris DX-1 50S ribosomal protein L17 YP_004108534.1 2367027 D 652103 CDS YP_004108535.1 316933553 10064424 2367796..2368590 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oca:OCAR_5704 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 2368590 10064424 Rpdx1_2209 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004108535.1 2367796 D 652103 CDS YP_004108536.1 316933554 10064425 complement(2368799..2369815) 1 NC_014834.1 KEGG: bja:blr5371 zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; zinc-binding alcohol dehydrogenase family protein 2369815 10064425 Rpdx1_2210 Rhodopseudomonas palustris DX-1 zinc-binding alcohol dehydrogenase family protein YP_004108536.1 2368799 R 652103 CDS YP_004108537.1 316933555 10064426 2369932..2370321 1 NC_014834.1 PFAM: helix-turn-helix HxlR type; KEGG: bja:bll5370 transcriptional regulatory protein; HxlR family transcriptional regulator 2370321 10064426 Rpdx1_2211 Rhodopseudomonas palustris DX-1 HxlR family transcriptional regulator YP_004108537.1 2369932 D 652103 CDS YP_004108538.1 316933556 10064427 2370404..2371795 1 NC_014834.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bbt:BBta_5038 serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; protease Do 2371795 10064427 Rpdx1_2212 Rhodopseudomonas palustris DX-1 protease Do YP_004108538.1 2370404 D 652103 CDS YP_004108539.1 316933557 10064429 2372021..2373352 1 NC_014834.1 KEGG: bja:bll5367 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; AAA ATPase 2373352 10064429 Rpdx1_2214 Rhodopseudomonas palustris DX-1 AAA ATPase YP_004108539.1 2372021 D 652103 CDS YP_004108540.1 316933558 10064430 2373652..2375622 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bbt:BBta_1127 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 2375622 10064430 Rpdx1_2215 Rhodopseudomonas palustris DX-1 diguanylate cyclase/phosphodiesterase YP_004108540.1 2373652 D 652103 CDS YP_004108541.1 316933559 10064431 2375695..2376114 1 NC_014834.1 PFAM: protein of unknown function UPF0047; KEGG: bra:BRADO6457 hypothetical protein; hypothetical protein 2376114 10064431 Rpdx1_2216 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108541.1 2375695 D 652103 CDS YP_004108542.1 316933560 10064432 2376220..2377428 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr2988 hypothetical protein; extracellular ligand-binding receptor 2377428 10064432 Rpdx1_2217 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004108542.1 2376220 D 652103 CDS YP_004108543.1 316933561 10064433 complement(2377563..2379623) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: mrd:Mrad2831_4432 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; response regulator receiver; PAS/PAC sensor hybrid histidine kinase 2379623 10064433 Rpdx1_2218 Rhodopseudomonas palustris DX-1 PAS/PAC sensor hybrid histidine kinase YP_004108543.1 2377563 R 652103 CDS YP_004108544.1 316933562 10064434 complement(2379829..2380506) 1 NC_014834.1 PFAM: nitroreductase; KEGG: pzu:PHZ_c0956 nitroreductase; nitroreductase 2380506 10064434 Rpdx1_2219 Rhodopseudomonas palustris DX-1 nitroreductase YP_004108544.1 2379829 R 652103 CDS YP_004108545.1 316933563 10064435 complement(2380731..2383313) 1 NC_014834.1 KEGG: abm:ABSDF3536 hypothetical protein; hypothetical protein 2383313 10064435 Rpdx1_2220 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108545.1 2380731 R 652103 CDS YP_004108546.1 316933564 10064436 2383575..2384942 1 NC_014834.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: bbt:BBta_5034 ribosomal large subunit pseudouridine synthase C; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 2384942 10064436 Rpdx1_2221 Rhodopseudomonas palustris DX-1 RluA family pseudouridine synthase YP_004108546.1 2383575 D 652103 CDS YP_004108547.1 316933565 10064437 2385085..2385474 1 NC_014834.1 KEGG: oca:OCAR_5711 hypothetical protein; hypothetical protein 2385474 10064437 Rpdx1_2222 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108547.1 2385085 D 652103 CDS YP_004108548.1 316933566 10064438 2385492..2386277 1 NC_014834.1 PFAM: ATP12 ATPase; KEGG: bja:bll5364 hypothetical protein; ATPase 2386277 10064438 Rpdx1_2223 Rhodopseudomonas palustris DX-1 ATPase YP_004108548.1 2385492 D 652103 CDS YP_004108549.1 316933567 10064439 2386347..2388128 1 NC_014834.1 KEGG: bbt:BBta_5030 hypothetical protein; hypothetical protein 2388128 10064439 Rpdx1_2224 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108549.1 2386347 D 652103 CDS YP_004108550.1 316933568 10064440 2388125..2388400 1 NC_014834.1 PFAM: type III secretion exporter; KEGG: nha:Nham_1578 type III secretion protein; type III secretion exporter 2388400 10064440 Rpdx1_2225 Rhodopseudomonas palustris DX-1 type III secretion exporter YP_004108550.1 2388125 D 652103 CDS YP_004108551.1 316933569 10064441 complement(2388402..2388848) 1 NC_014834.1 KEGG: bbt:BBta_5025 hypothetical protein; hypothetical protein 2388848 10064441 Rpdx1_2226 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108551.1 2388402 R 652103 CDS YP_004108552.1 316933570 10064442 2389118..2390650 1 NC_014834.1 PFAM: carboxyl transferase; KEGG: bra:BRADO4331 putative propionyl-CoA carboxylase beta chain; carboxyl transferase 2390650 10064442 Rpdx1_2227 Rhodopseudomonas palustris DX-1 carboxyl transferase YP_004108552.1 2389118 D 652103 CDS YP_004108553.1 316933571 10064443 2390848..2391705 1 NC_014834.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mdi:METDI3166 putative epimerase with NAD(P)-binding Rossmann-fold domain (YeeZ-like); NAD-dependent epimerase/dehydratase 2391705 10064443 Rpdx1_2228 Rhodopseudomonas palustris DX-1 NAD-dependent epimerase/dehydratase YP_004108553.1 2390848 D 652103 CDS YP_004108554.1 316933572 10064444 2392135..2393193 1 NC_014834.1 KEGG: nhl:Nhal_2911 putative lipoprotein transmembrane; hypothetical protein 2393193 10064444 Rpdx1_2229 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108554.1 2392135 D 652103 CDS YP_004108555.1 316933573 10064445 2393584..2394423 1 NC_014834.1 PFAM: formate/nitrite transporter; KEGG: bja:bll2801 formate transporter; formate/nitrite transporter 2394423 10064445 Rpdx1_2230 Rhodopseudomonas palustris DX-1 formate/nitrite transporter YP_004108555.1 2393584 D 652103 CDS YP_004108556.1 316933574 10064446 2394491..2396224 1 NC_014834.1 KEGG: bja:bll2800 bifunctional serine/threonine kinase and phosphatase; PFAM: Serine/threonine-protein kinase-like domain; Stage II sporulation E family protein; SMART: serine/threonine protein kinase; protein phosphatase 2C domain protein; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 2396224 10064446 Rpdx1_2231 Rhodopseudomonas palustris DX-1 serine/threonine protein kinase YP_004108556.1 2394491 D 652103 CDS YP_004108557.1 316933575 10064447 2396314..2396862 1 NC_014834.1 KEGG: bid:Bind_2416 hypothetical protein; hypothetical protein 2396862 10064447 Rpdx1_2232 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108557.1 2396314 D 652103 CDS YP_004108558.1 316933576 10064448 2396967..2397776 1 NC_014834.1 PFAM: protein of unknown function DUF1295; KEGG: blt:Balat_0580 hypothetical protein; hypothetical protein 2397776 10064448 Rpdx1_2233 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108558.1 2396967 D 652103 CDS YP_004108559.1 316933577 10064449 complement(2397839..2398129) 1 NC_014834.1 KEGG: bja:bsr5347 hypothetical protein; hypothetical protein 2398129 10064449 Rpdx1_2234 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108559.1 2397839 R 652103 CDS YP_004108560.1 316933578 10064450 complement(2398354..2398755) 1 NC_014834.1 KEGG: bja:blr5341 hypothetical protein; hypothetical protein 2398755 10064450 Rpdx1_2235 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108560.1 2398354 R 652103 CDS YP_004108561.1 316933579 10064451 2399086..2402571 1 NC_014834.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: bja:bll5338 indolepyruvate ferredoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase catalytic subunit 2402571 10064451 Rpdx1_2236 Rhodopseudomonas palustris DX-1 pyruvate/ketoisovalerate oxidoreductase catalytic subunit YP_004108561.1 2399086 D 652103 CDS YP_004108562.1 316933580 10064452 2402824..2403972 1 NC_014834.1 KEGG: bra:BRADO4314 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 2403972 10064452 Rpdx1_2237 Rhodopseudomonas palustris DX-1 acetyl-CoA acetyltransferase YP_004108562.1 2402824 D 652103 CDS YP_004108563.1 316933581 10064453 2403972..2404364 1 NC_014834.1 PFAM: protein of unknown function DUF35; KEGG: bbt:BBta_5005 hypothetical protein; hypothetical protein 2404364 10064453 Rpdx1_2238 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108563.1 2403972 D 652103 CDS YP_004108564.1 316933582 10064454 2404513..2405373 1 NC_014834.1 KEGG: bja:bll5333 putative dehydrogenase; PFAM: MaoC domain protein dehydratase; 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase 2405373 10064454 Rpdx1_2239 Rhodopseudomonas palustris DX-1 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase YP_004108564.1 2404513 D 652103 CDS YP_004108565.1 316933583 10064455 2405458..2406411 1 NC_014834.1 PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll5331 hypothetical protein; dihydrodipicolinate synthetase 2406411 10064455 Rpdx1_2240 Rhodopseudomonas palustris DX-1 dihydrodipicolinate synthetase YP_004108565.1 2405458 D 652103 CDS YP_004108566.1 316933584 10064456 2406416..2407207 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: bbt:BBta_5001 hypothetical protein; NUDIX hydrolase 2407207 10064456 Rpdx1_2241 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004108566.1 2406416 D 652103 CDS YP_004108567.1 316933585 10064457 2407361..2409535 1 NC_014834.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; KEGG: bbt:BBta_5502 putative alcohol dehydrogenase; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; PQQ-dependent dehydrogenase 2409535 10064457 Rpdx1_2242 Rhodopseudomonas palustris DX-1 PQQ-dependent dehydrogenase YP_004108567.1 2407361 D 652103 CDS YP_004108568.1 316933586 10064458 2409719..2412421 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: bja:bll5328 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; PAC repeat-containing protein; PAS domain containing protein; histidine kinase HAMP region domain protein; multi-sensor signal transduction histidine kinase 2412421 10064458 Rpdx1_2243 Rhodopseudomonas palustris DX-1 multi-sensor signal transduction histidine kinase YP_004108568.1 2409719 D 652103 CDS YP_004108569.1 316933587 10064459 complement(2412454..2412804) 1 NC_014834.1 KEGG: nha:Nham_2176 hypothetical protein; hypothetical protein 2412804 10064459 Rpdx1_2244 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108569.1 2412454 R 652103 CDS YP_004108570.1 316933588 10064460 complement(2412998..2415016) 1 NC_014834.1 KEGG: bra:BRADO6631 putative methyl-accepting chemotaxis receptor/sensory transducer precursor; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 2415016 10064460 Rpdx1_2245 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004108570.1 2412998 R 652103 CDS YP_004108571.1 316933589 10064462 2415793..2416236 1 NC_014834.1 KEGG: bja:bll5314 hypothetical protein; hypothetical protein 2416236 10064462 Rpdx1_2246 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108571.1 2415793 D 652103 CDS YP_004108572.1 316933590 10064463 2416468..2417343 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:bll5313 hypothetical protein; hypothetical protein 2417343 10064463 Rpdx1_2247 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108572.1 2416468 D 652103 CDS YP_004108573.1 316933591 10064464 complement(2417440..2417802) 1 NC_014834.1 KEGG: bja:blr5311 histon H1; hypothetical protein 2417802 10064464 Rpdx1_2248 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108573.1 2417440 R 652103 CDS YP_004108574.1 316933592 10064465 complement(2417881..2419332) 1 NC_014834.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: bbt:BBta_4932 deoxyribodipyrimidine photo-lyase type I; DNA photolyase FAD-binding protein 2419332 10064465 Rpdx1_2249 Rhodopseudomonas palustris DX-1 DNA photolyase FAD-binding protein YP_004108574.1 2417881 R 652103 CDS YP_004108575.1 316933593 10064466 2419451..2419849 1 NC_014834.1 PFAM: Protein of unknown function DUF2177, membrane; KEGG: bra:BRADO3234 hypothetical protein; hypothetical protein 2419849 10064466 Rpdx1_2250 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108575.1 2419451 D 652103 CDS YP_004108576.1 316933594 10064467 2420141..2420716 1 NC_014834.1 KEGG: nwi:Nwi_1737 hypothetical protein; hypothetical protein 2420716 10064467 Rpdx1_2251 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108576.1 2420141 D 652103 CDS YP_004108577.1 316933595 10064468 2421083..2423098 1 NC_014834.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: nha:Nham_2165 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding protein 2423098 10064468 Rpdx1_2252 Rhodopseudomonas palustris DX-1 carbamoyl-phosphate synthase L chain ATP-binding protein YP_004108577.1 2421083 D 652103 CDS YP_004108578.1 316933596 10064469 2423103..2423969 1 NC_014834.1 KEGG: bja:bll5266 putative carboxy-phosphonoenolpyruvate mutase; putative carboxy-phosphonoenolpyruvate mutase 2423969 10064469 Rpdx1_2253 Rhodopseudomonas palustris DX-1 putative carboxy-phosphonoenolpyruvate mutase YP_004108578.1 2423103 D 652103 CDS YP_004108579.1 316933597 10064470 2423966..2424268 1 NC_014834.1 KEGG: bja:bsl5265 putative acylphosphatase; manually curated; PFAM: acylphosphatase; acylphosphatase 2424268 10064470 Rpdx1_2254 Rhodopseudomonas palustris DX-1 acylphosphatase YP_004108579.1 2423966 D 652103 CDS YP_004108580.1 316933598 10064471 complement(2424363..2426981) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; GAF domain protein; KEGG: bja:bll6545 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; PAS/PAC GAF sensor -containing diguanylate cyclase/phosphodiesterase 2426981 10064471 Rpdx1_2255 Rhodopseudomonas palustris DX-1 PAS/PAC GAF sensor -containing diguanylate cyclase/phosphodiesterase YP_004108580.1 2424363 R 652103 CDS YP_004108581.1 316933599 10064472 complement(2427253..2427990) 1 NC_014834.1 TIGRFAM: lipoate-protein ligase B; KEGG: bja:blr5257 lipoyltransferase; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 2427990 10064472 Rpdx1_2256 Rhodopseudomonas palustris DX-1 lipoate-protein ligase B YP_004108581.1 2427253 R 652103 CDS YP_004108582.1 316933600 10064473 2428057..2428299 1 NC_014834.1 KEGG: bja:bsl5256 hypothetical protein; manually curated; PFAM: surface presentation of antigens (SPOA) protein; surface presentation of antigens (SPOA) protein 2428299 10064473 Rpdx1_2257 Rhodopseudomonas palustris DX-1 surface presentation of antigens (SPOA) protein YP_004108582.1 2428057 D 652103 CDS YP_004108583.1 316933601 10064475 complement(2428574..2429035) 1 NC_014834.1 PFAM: RES domain protein; KEGG: xau:Xaut_5010 RES domain-containing protein; RES domain-containing protein 2429035 10064475 Rpdx1_2258 Rhodopseudomonas palustris DX-1 RES domain-containing protein YP_004108583.1 2428574 R 652103 CDS YP_004108584.1 316933602 10064476 complement(2429035..2429463) 1 NC_014834.1 KEGG: nha:Nham_3790 hypothetical protein; hypothetical protein 2429463 10064476 Rpdx1_2259 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108584.1 2429035 R 652103 CDS YP_004108585.1 316933603 10064477 complement(2429551..2430870) 1 NC_014834.1 PFAM: polysaccharide deacetylase; KEGG: nha:Nham_2435 polysaccharide deacetylase; polysaccharide deacetylase 2430870 10064477 Rpdx1_2260 Rhodopseudomonas palustris DX-1 polysaccharide deacetylase YP_004108585.1 2429551 R 652103 CDS YP_004108586.1 316933604 10064478 complement(2431007..2431810) 1 NC_014834.1 PFAM: polysaccharide deacetylase; KEGG: nha:Nham_2434 polysaccharide deacetylase; polysaccharide deacetylase 2431810 10064478 Rpdx1_2261 Rhodopseudomonas palustris DX-1 polysaccharide deacetylase YP_004108586.1 2431007 R 652103 CDS YP_004108587.1 316933605 10064479 2431972..2433393 1 NC_014834.1 KEGG: bra:BRADO4563 putative magnesium transporter MgtE-like (divalent cation transporter Mg2+/Ni2+/Co2+); TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; CBS domain containing protein; MgtE integral membrane region; magnesium transporter 2433393 10064479 Rpdx1_2262 Rhodopseudomonas palustris DX-1 magnesium transporter YP_004108587.1 2431972 D 652103 CDS YP_004108588.1 316933606 10064480 2433621..2434454 1 NC_014834.1 PFAM: aldo/keto reductase; KEGG: bra:BRADO4561 putative aldo/keto reductase; putative 2,5-diketo-D-gluconate reductase B (DkgB-like); aldo/keto reductase 2434454 10064480 Rpdx1_2263 Rhodopseudomonas palustris DX-1 aldo/keto reductase YP_004108588.1 2433621 D 652103 CDS YP_004108589.1 316933607 10064481 2434531..2435325 1 NC_014834.1 PFAM: protein of unknown function DUF218; KEGG: nha:Nham_2431 hypothetical protein; hypothetical protein 2435325 10064481 Rpdx1_2264 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108589.1 2434531 D 652103 CDS YP_004108590.1 316933608 10064482 complement(2435334..2435624) 1 NC_014834.1 KEGG: oca:OCAR_5754 hypothetical protein; hypothetical protein 2435624 10064482 Rpdx1_2265 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108590.1 2435334 R 652103 CDS YP_004108591.1 316933609 10064483 2435744..2436400 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: nha:Nham_2428 glutathione S-transferase-like; glutathione S-transferase domain-containing protein 2436400 10064483 Rpdx1_2266 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004108591.1 2435744 D 652103 CDS YP_004108592.1 316933610 10064484 2436610..2436801 1 NC_014834.1 KEGG: nha:Nham_2427 hypothetical protein; hypothetical protein 2436801 10064484 Rpdx1_2267 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108592.1 2436610 D 652103 CDS YP_004108593.1 316933611 10064485 2437172..2438191 1 NC_014834.1 KEGG: nha:Nham_2426 hypothetical protein; hypothetical protein 2438191 10064485 Rpdx1_2268 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108593.1 2437172 D 652103 CDS YP_004108594.1 316933612 10064486 2438228..2438647 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: nha:Nham_2425 hypothetical protein; hypothetical protein 2438647 10064486 Rpdx1_2269 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108594.1 2438228 D 652103 CDS YP_004108595.1 316933613 10064487 complement(2438687..2439568) 1 NC_014834.1 KEGG: bja:blr5162 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase; pantoate/beta-alanine ligase 2439568 10064487 Rpdx1_2270 Rhodopseudomonas palustris DX-1 pantoate/beta-alanine ligase YP_004108595.1 2438687 R 652103 CDS YP_004108596.1 316933614 10064488 2439791..2440714 1 NC_014834.1 PFAM: ATPase MipZ; KEGG: bja:bll5161 hypothetical protein; ATPase MipZ 2440714 10064488 Rpdx1_2271 Rhodopseudomonas palustris DX-1 ATPase MipZ YP_004108596.1 2439791 D 652103 CDS YP_004108597.1 316933615 10064489 2440983..2441810 1 NC_014834.1 KEGG: bra:BRADO4552 putative alpha/beta-hydrolases; putative alpha/beta-hydrolase 2441810 10064489 Rpdx1_2272 Rhodopseudomonas palustris DX-1 putative alpha/beta-hydrolase YP_004108597.1 2440983 D 652103 CDS YP_004108598.1 316933616 10064490 2441885..2442619 1 NC_014834.1 KEGG: bja:bll5159 hypothetical protein; hypothetical protein 2442619 10064490 Rpdx1_2273 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108598.1 2441885 D 652103 CDS YP_004108599.1 316933617 10064491 2442675..2443400 1 NC_014834.1 KEGG: bja:bll5157 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 2443400 10064491 Rpdx1_2274 Rhodopseudomonas palustris DX-1 heat shock protein DnaJ domain-containing protein YP_004108599.1 2442675 D 652103 CDS YP_004108600.1 316933618 10064492 complement(2443649..2445379) 1 NC_014834.1 KEGG: nha:Nham_2420 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; serine-type D-Ala-D-Ala carboxypeptidase 2445379 10064492 Rpdx1_2275 Rhodopseudomonas palustris DX-1 serine-type D-Ala-D-Ala carboxypeptidase YP_004108600.1 2443649 R 652103 CDS YP_004108601.1 316933619 10064493 complement(2445764..2447215) 1 NC_014834.1 KEGG: nha:Nham_2418 hypothetical protein; hypothetical protein 2447215 10064493 Rpdx1_2276 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108601.1 2445764 R 652103 CDS YP_004108602.1 316933620 10064494 2447619..2448017 1 NC_014834.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: bja:bll5154 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 2448017 10064494 Rpdx1_2277 Rhodopseudomonas palustris DX-1 ATP-dependent Clp protease adaptor protein ClpS YP_004108602.1 2447619 D 652103 CDS YP_004108603.1 316933621 10064495 2448209..2450596 1 NC_014834.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: bja:bll5153 ClpA-like protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 2450596 10064495 Rpdx1_2278 Rhodopseudomonas palustris DX-1 ATP-dependent Clp protease ATP-binding protein ClpA YP_004108603.1 2448209 D 652103 CDS YP_004108604.1 316933622 10064496 complement(2450691..2452472) 1 NC_014834.1 KEGG: bja:blr2522 hypothetical protein; hypothetical protein 2452472 10064496 Rpdx1_2279 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108604.1 2450691 R 652103 CDS YP_004108605.1 316933623 10064497 complement(2452998..2453927) 1 NC_014834.1 KEGG: bbt:BBta_4763 hypothetical protein; hypothetical protein 2453927 10064497 Rpdx1_2280 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108605.1 2452998 R 652103 CDS YP_004108606.1 316933624 10064498 2454176..2455054 1 NC_014834.1 PFAM: Lytic transglycosylase catalytic; Sporulation domain protein; KEGG: bja:bll5139 transglycosylase; lytic transglycosylase 2455054 10064498 Rpdx1_2281 Rhodopseudomonas palustris DX-1 lytic transglycosylase YP_004108606.1 2454176 D 652103 CDS YP_004108607.1 316933625 10064499 2455149..2455889 1 NC_014834.1 PFAM: AzlC family protein; KEGG: bra:BRADO4535 putative permease; AzlC family protein 2455889 10064499 Rpdx1_2282 Rhodopseudomonas palustris DX-1 AzlC family protein YP_004108607.1 2455149 D 652103 CDS YP_004108608.1 316933626 10064500 2455886..2456230 1 NC_014834.1 PFAM: branched-chain amino acid transport; KEGG: bbt:BBta_4760 hypothetical protein; branched-chain amino acid transport 2456230 10064500 Rpdx1_2283 Rhodopseudomonas palustris DX-1 branched-chain amino acid transport YP_004108608.1 2455886 D 652103 CDS YP_004108609.1 316933627 10064501 2456280..2456744 1 NC_014834.1 PFAM: protein of unknown function UPF0066; KEGG: nha:Nham_2452 hypothetical protein; hypothetical protein 2456744 10064501 Rpdx1_2284 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108609.1 2456280 D 652103 CDS YP_004108610.1 316933628 10064502 complement(2456795..2457877) 1 NC_014834.1 KEGG: rca:Rcas_3954 CaCA family Na(+)/Ca(+) antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; CaCA family Na+/Ca+ antiporter 2457877 10064502 Rpdx1_2285 Rhodopseudomonas palustris DX-1 CaCA family Na+/Ca+ antiporter YP_004108610.1 2456795 R 652103 CDS YP_004108611.1 316933629 10064503 complement(2458007..2458435) 1 NC_014834.1 PFAM: histidine triad (HIT) protein; KEGG: bja:blr5135 hypothetical protein; histidine triad (HIT) protein 2458435 10064503 Rpdx1_2286 Rhodopseudomonas palustris DX-1 histidine triad (HIT) protein YP_004108611.1 2458007 R 652103 CDS YP_004108612.1 316933630 10064504 complement(2458486..2459724) 1 NC_014834.1 PFAM: protein of unknown function DUF482; KEGG: bja:blr5134 hypothetical protein; hypothetical protein 2459724 10064504 Rpdx1_2287 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108612.1 2458486 R 652103 CDS YP_004108613.1 316933631 10064505 complement(2459807..2460559) 1 NC_014834.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bja:blr5133 hypothetical protein; glycerophosphoryl diester phosphodiesterase 2460559 10064505 Rpdx1_2288 Rhodopseudomonas palustris DX-1 glycerophosphoryl diester phosphodiesterase YP_004108613.1 2459807 R 652103 CDS YP_004108614.1 316933632 10064506 complement(2460575..2461042) 1 NC_014834.1 PFAM: Endoribonuclease L-PSP; KEGG: nwi:Nwi_1427 endoribonuclease L-PSP; endoribonuclease L-PSP 2461042 10064506 Rpdx1_2289 Rhodopseudomonas palustris DX-1 endoribonuclease L-PSP YP_004108614.1 2460575 R 652103 CDS YP_004108615.1 316933633 10064507 2461308..2462174 1 NC_014834.1 PFAM: Domain of unknown function DUF1849; KEGG: nha:Nham_2446 hypothetical protein; hypothetical protein 2462174 10064507 Rpdx1_2290 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108615.1 2461308 D 652103 CDS YP_004108616.1 316933634 10064508 complement(2462333..2463655) 1 NC_014834.1 KEGG: bja:blr5126 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase 2463655 10064508 Rpdx1_2291 Rhodopseudomonas palustris DX-1 DNA-directed DNA polymerase YP_004108616.1 2462333 R 652103 CDS YP_004108617.1 316933635 10064509 complement(2463634..2463933) 1 NC_014834.1 KEGG: bbt:BBta_4748 hypothetical protein; hypothetical protein 2463933 10064509 Rpdx1_2292 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108617.1 2463634 R 652103 CDS YP_004108618.1 316933636 10064510 2464059..2464424 1 NC_014834.1 KEGG: bja:bll5124 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 2464424 10064510 Rpdx1_2293 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004108618.1 2464059 D 652103 CDS YP_004108619.1 316933637 10064511 2464435..2465808 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: nha:Nham_2442 response regulator PleD; SMART: GGDEF domain containing protein; response regulator receiver; response regulator receiver modulated diguanylate cyclase 2465808 10064511 Rpdx1_2294 Rhodopseudomonas palustris DX-1 response regulator receiver modulated diguanylate cyclase YP_004108619.1 2464435 D 652103 CDS YP_004108620.1 316933638 10064512 2465833..2466117 1 NC_014834.1 KEGG: sit:TM1040_0816 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2136; hypothetical protein 2466117 10064512 Rpdx1_2295 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108620.1 2465833 D 652103 CDS YP_004108621.1 316933639 10064513 2466128..2466511 1 NC_014834.1 KEGG: mno:Mnod_7326 putative transcription regulator with HTH domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 2466511 10064513 Rpdx1_2296 Rhodopseudomonas palustris DX-1 XRE family transcriptional regulator YP_004108621.1 2466128 D 652103 CDS YP_004108622.1 316933640 10064514 complement(2466777..2466944) 1 NC_014834.1 KEGG: nha:Nham_2441 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; 50S ribosomal protein L33 2466944 10064514 Rpdx1_2297 Rhodopseudomonas palustris DX-1 50S ribosomal protein L33 YP_004108622.1 2466777 R 652103 CDS YP_004108623.1 316933641 10064515 2467242..2468492 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A3477 major facilitator transporter; major facilitator superfamily protein 2468492 10064515 Rpdx1_2298 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004108623.1 2467242 D 652103 CDS YP_004108624.1 316933642 10064516 complement(2468526..2469281) 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: bra:BRADO4511 putative NUDIX hydrolase; NUDIX hydrolase 2469281 10064516 Rpdx1_2299 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004108624.1 2468526 R 652103 CDS YP_004108625.1 316933643 10064517 complement(2469351..2469779) 1 NC_014834.1 PFAM: protein of unknown function DUF983; KEGG: bbt:BBta_4735 hypothetical protein; hypothetical protein 2469779 10064517 Rpdx1_2300 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108625.1 2469351 R 652103 CDS YP_004108626.1 316933644 10064518 complement(2469779..2472124) 1 NC_014834.1 TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: nha:Nham_2438 ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease R 2472124 10064518 Rpdx1_2301 Rhodopseudomonas palustris DX-1 ribonuclease R YP_004108626.1 2469779 R 652103 CDS YP_004108627.1 316933645 10064519 complement(2472127..2474859) 1 NC_014834.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; TIGRFAM: DNA topoisomerase I; KEGG: nha:Nham_2437 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I 2474859 10064519 Rpdx1_2302 Rhodopseudomonas palustris DX-1 DNA topoisomerase I YP_004108627.1 2472127 R 652103 CDS YP_004108628.1 316933646 10064520 2475105..2475320 1 NC_014834.1 KEGG: nwi:Nwi_1711 hypothetical protein; hypothetical protein 2475320 10064520 Rpdx1_2303 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108628.1 2475105 D 652103 CDS YP_004108629.1 316933647 10064521 complement(2475577..2476713) 1 NC_014834.1 KEGG: nha:Nham_2285 DNA processing protein DprA, putative; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 2476713 10064521 Rpdx1_2304 Rhodopseudomonas palustris DX-1 DNA protecting protein DprA YP_004108629.1 2475577 R 652103 CDS YP_004108630.1 316933648 10064522 complement(2476843..2477451) 1 NC_014834.1 PFAM: protein of unknown function DUF205; KEGG: bja:blr5101 putative glycerol-3-phosphate acyltransferase PlsY; hypothetical protein 2477451 10064522 Rpdx1_2305 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108630.1 2476843 R 652103 CDS YP_004108631.1 316933649 10064523 complement(2477629..2478930) 1 NC_014834.1 KEGG: bja:blr5100 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; multifunctional complex dihydroorotase 2478930 10064523 Rpdx1_2306 Rhodopseudomonas palustris DX-1 multifunctional complex dihydroorotase YP_004108631.1 2477629 R 652103 CDS YP_004108632.1 316933650 10064524 complement(2478950..2479903) 1 NC_014834.1 TIGRFAM: aspartate carbamoyltransferase; KEGG: bbt:BBta_4725 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate carbamoyltransferase 2479903 10064524 Rpdx1_2307 Rhodopseudomonas palustris DX-1 aspartate carbamoyltransferase YP_004108632.1 2478950 R 652103 CDS YP_004108633.1 316933651 10064525 2480096..2481727 1 NC_014834.1 KEGG: bbt:BBta_0512 indole-3-pyruvate decarboxylase; TIGRFAM: indolepyruvate/phenylpyruvate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; indolepyruvate/phenylpyruvate decarboxylase 2481727 10064525 Rpdx1_2308 Rhodopseudomonas palustris DX-1 indolepyruvate/phenylpyruvate decarboxylase YP_004108633.1 2480096 D 652103 CDS YP_004108634.1 316933652 10064526 2481807..2483456 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll5097 acyl CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2483456 10064526 Rpdx1_2309 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004108634.1 2481807 D 652103 CDS YP_004108635.1 316933653 10064527 complement(2483578..2483964) 1 NC_014834.1 KEGG: gem:GM21_0959 sec-C motif domain protein; sec-C motif domain-containing protein 2483964 10064527 Rpdx1_2310 Rhodopseudomonas palustris DX-1 sec-C motif domain-containing protein YP_004108635.1 2483578 R 652103 CDS YP_004108636.1 316933654 10064528 complement(2483985..2484467) 1 NC_014834.1 KEGG: nha:Nham_2279 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; Holliday junction resolvase YqgF 2484467 10064528 Rpdx1_2311 Rhodopseudomonas palustris DX-1 Holliday junction resolvase YqgF YP_004108636.1 2483985 R 652103 CDS YP_004108637.1 316933655 10064529 complement(2484553..2485488) 1 NC_014834.1 PFAM: cyclase family protein; KEGG: bra:BRADO4495 putative cyclase; cyclase family protein 2485488 10064529 Rpdx1_2312 Rhodopseudomonas palustris DX-1 cyclase family protein YP_004108637.1 2484553 R 652103 CDS YP_004108638.1 316933656 10064530 2485804..2486880 1 NC_014834.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: nha:Nham_2278 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 2486880 10064530 Rpdx1_2313 Rhodopseudomonas palustris DX-1 2-nitropropane dioxygenase YP_004108638.1 2485804 D 652103 CDS YP_004108639.1 316933657 10064531 2486968..2487255 1 NC_014834.1 KEGG: oca:OCAR_5794 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 2487255 10064531 Rpdx1_2314 Rhodopseudomonas palustris DX-1 glutamyl-tRNA(Gln) amidotransferase subunit C YP_004108639.1 2486968 D 652103 CDS YP_004108640.1 316933658 10064532 2487267..2487473 1 NC_014834.1 KEGG: nha:Nham_2276 hypothetical protein; hypothetical protein 2487473 10064532 Rpdx1_2315 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108640.1 2487267 D 652103 CDS YP_004108641.1 316933659 10064533 complement(2487477..2487764) 1 NC_014834.1 KEGG: oca:OCAR_6294 hypothetical protein; hypothetical protein 2487764 10064533 Rpdx1_2316 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108641.1 2487477 R 652103 CDS YP_004108642.1 316933660 10064535 2488180..2489658 1 NC_014834.1 KEGG: nha:Nham_2275 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; glutamyl-tRNA(Gln) amidotransferase subunit A 2489658 10064535 Rpdx1_2318 Rhodopseudomonas palustris DX-1 glutamyl-tRNA(Gln) amidotransferase subunit A YP_004108642.1 2488180 D 652103 CDS YP_004108643.1 316933661 10064536 2489736..2490842 1 NC_014834.1 KEGG: mlo:mlr9681 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; signal transduction histidine kinase 2490842 10064536 Rpdx1_2319 Rhodopseudomonas palustris DX-1 signal transduction histidine kinase YP_004108643.1 2489736 D 652103 CDS YP_004108644.1 316933662 10064537 2490984..2492366 1 NC_014834.1 PFAM: Patatin; KEGG: nha:Nham_2273 patatin; patatin 2492366 10064537 Rpdx1_2320 Rhodopseudomonas palustris DX-1 patatin YP_004108644.1 2490984 D 652103 CDS YP_004108645.1 316933663 10064538 2492459..2493943 1 NC_014834.1 KEGG: nwi:Nwi_1997 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; glutamyl-tRNA(Gln) amidotransferase subunit B 2493943 10064538 Rpdx1_2321 Rhodopseudomonas palustris DX-1 glutamyl-tRNA(Gln) amidotransferase subunit B YP_004108645.1 2492459 D 652103 CDS YP_004108646.1 316933664 10064539 2494467..2494604 1 NC_014834.1 KEGG: lbz:LbrM27_V2.1290 histone H1; histone H1 2494604 10064539 Rpdx1_2322 Rhodopseudomonas palustris DX-1 histone H1 YP_004108646.1 2494467 D 652103 CDS YP_004108647.1 316933665 10064540 2495293..2495559 1 NC_014834.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bbt:BBta_4706 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 2495559 10064540 Rpdx1_2323 Rhodopseudomonas palustris DX-1 Sel1 domain-containing protein repeat-containing protein YP_004108647.1 2495293 D 652103 CDS YP_004108648.1 316933666 10064541 complement(2495605..2496603) 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: reu:Reut_A0309 twin-arginine translocation pathway signal; hypothetical protein 2496603 10064541 Rpdx1_2324 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108648.1 2495605 R 652103 CDS YP_004108649.1 316933667 10064542 2496745..2497329 1 NC_014834.1 KEGG: oca:OCAR_6389 NnrU protein; NnrU protein 2497329 10064542 Rpdx1_2325 Rhodopseudomonas palustris DX-1 NnrU protein YP_004108649.1 2496745 D 652103 CDS YP_004108650.1 316933668 10064543 2497336..2498160 1 NC_014834.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: nha:Nham_1683 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2498160 10064543 Rpdx1_2326 Rhodopseudomonas palustris DX-1 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004108650.1 2497336 D 652103 CDS YP_004108651.1 316933669 10064544 2498325..2498981 1 NC_014834.1 PFAM: Protein of unknown function DUF2133; KEGG: bja:blr4050 hypothetical protein; hypothetical protein 2498981 10064544 Rpdx1_2327 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108651.1 2498325 D 652103 CDS YP_004108652.1 316933670 10064545 2499027..2499548 1 NC_014834.1 KEGG: bbt:BBta_3775 hypothetical protein; hypothetical protein 2499548 10064545 Rpdx1_2328 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108652.1 2499027 D 652103 CDS YP_004108653.1 316933671 10064546 2499622..2500998 1 NC_014834.1 KEGG: bja:blr4052 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; ribosome-associated GTPase EngA 2500998 10064546 Rpdx1_2329 Rhodopseudomonas palustris DX-1 ribosome-associated GTPase EngA YP_004108653.1 2499622 D 652103 CDS YP_004108654.1 316933672 10064547 2500995..2502260 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr4054 tetracycline resistance protein; major facilitator superfamily protein 2502260 10064547 Rpdx1_2330 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004108654.1 2500995 D 652103 CDS YP_004108655.1 316933673 10064548 complement(2502407..2507317) 1 NC_014834.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: cell surface receptor IPT/TIG domain protein; KEGG: bra:BRADO3823 hypothetical protein; SMART: cell surface receptor IPT/TIG domain protein; outer membrane autotransporter barrel domain-containing protein 2507317 10064548 Rpdx1_2331 Rhodopseudomonas palustris DX-1 outer membrane autotransporter barrel domain-containing protein YP_004108655.1 2502407 R 652103 CDS YP_004108656.1 316933674 10064549 2507971..2508606 1 NC_014834.1 PFAM: Tail Collar domain protein; KEGG: ote:Oter_4253 tail collar domain-containing protein; Tail Collar domain-containing protein 2508606 10064549 Rpdx1_2332 Rhodopseudomonas palustris DX-1 Tail Collar domain-containing protein YP_004108656.1 2507971 D 652103 CDS YP_004108657.1 316933675 10064550 complement(2508676..2508963) 1 NC_014834.1 KEGG: rce:RC1_3289 hypothetical protein; hypothetical protein 2508963 10064550 Rpdx1_2333 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108657.1 2508676 R 652103 CDS YP_004108658.1 316933676 10064551 2509087..2509659 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cja:CJA_0596 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2509659 10064551 Rpdx1_2334 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004108658.1 2509087 D 652103 CDS YP_004108659.1 316933677 10064552 complement(2509745..2510971) 1 NC_014834.1 KEGG: bbt:BBta_3779 putative ABC transporter, substrate binding protein; putative ABC transporter substrate-binding protein 2510971 10064552 Rpdx1_2335 Rhodopseudomonas palustris DX-1 putative ABC transporter substrate-binding protein YP_004108659.1 2509745 R 652103 CDS YP_004108660.1 316933678 10064553 complement(2511055..2511798) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nwi:Nwi_2019 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2511798 10064553 Rpdx1_2336 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004108660.1 2511055 R 652103 CDS YP_004108661.1 316933679 10064554 complement(2511948..2513477) 1 NC_014834.1 KEGG: oca:OCAR_6382 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 2513477 10064554 Rpdx1_2337 Rhodopseudomonas palustris DX-1 amidophosphoribosyltransferase YP_004108661.1 2511948 R 652103 CDS YP_004108662.1 316933680 10064555 complement(2513501..2514136) 1 NC_014834.1 PFAM: Colicin V production protein; KEGG: bja:bll4061 colicin V production protein; colicin V production protein 2514136 10064555 Rpdx1_2338 Rhodopseudomonas palustris DX-1 colicin V production protein YP_004108662.1 2513501 R 652103 CDS YP_004108663.1 316933681 10064556 complement(2514350..2515807) 1 NC_014834.1 KEGG: bja:bll4062 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; DNA repair protein RadA 2515807 10064556 Rpdx1_2339 Rhodopseudomonas palustris DX-1 DNA repair protein RadA YP_004108663.1 2514350 R 652103 CDS YP_004108664.1 316933682 10064557 2515958..2516350 1 NC_014834.1 KEGG: xau:Xaut_1872 hypothetical protein; hypothetical protein 2516350 10064557 Rpdx1_2340 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108664.1 2515958 D 652103 CDS YP_004108665.1 316933683 10064558 2516456..2516710 1 NC_014834.1 KEGG: bra:BRADO5343 hypothetical protein; hypothetical protein 2516710 10064558 Rpdx1_2341 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108665.1 2516456 D 652103 CDS YP_004108666.1 316933684 10064559 complement(2516833..2518080) 1 NC_014834.1 TIGRFAM: alanine racemase; KEGG: nha:Nham_2290 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 2518080 10064559 Rpdx1_2342 Rhodopseudomonas palustris DX-1 alanine racemase YP_004108666.1 2516833 R 652103 CDS YP_004108667.1 316933685 10064560 complement(2518148..2519644) 1 NC_014834.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: nha:Nham_2289 replicative DNA helicase; SMART: AAA ATPase; replicative DNA helicase 2519644 10064560 Rpdx1_2343 Rhodopseudomonas palustris DX-1 replicative DNA helicase YP_004108667.1 2518148 R 652103 CDS YP_004108668.1 316933686 10064561 complement(2520268..2521521) 1 NC_014834.1 KEGG: nha:Nham_2287 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 2521521 10064561 Rpdx1_2344 Rhodopseudomonas palustris DX-1 cyclopropane-fatty-acyl-phospholipid synthase YP_004108668.1 2520268 R 652103 CDS YP_004108669.1 316933687 10064562 2521790..2522749 1 NC_014834.1 KEGG: bja:blr4073 hypothetical protein; hypothetical protein 2522749 10064562 Rpdx1_2345 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108669.1 2521790 D 652103 CDS YP_004108670.1 316933688 10064563 2523426..2524016 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bja:blr4074 transcriptional regulatory protein; regulatory protein TetR 2524016 10064563 Rpdx1_2346 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004108670.1 2523426 D 652103 CDS YP_004108671.1 316933689 10064564 2524021..2524485 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bja:blr4075 hypothetical protein; thioesterase superfamily protein 2524485 10064564 Rpdx1_2347 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004108671.1 2524021 D 652103 CDS YP_004108672.1 316933690 10064565 complement(2524529..2525116) 1 NC_014834.1 KEGG: bja:bll4076 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; 50S ribosomal protein L9 2525116 10064565 Rpdx1_2348 Rhodopseudomonas palustris DX-1 50S ribosomal protein L9 YP_004108672.1 2524529 R 652103 CDS YP_004108673.1 316933691 10064566 complement(2525153..2526103) 1 NC_014834.1 KEGG: nha:Nham_2414 hypothetical protein; hypothetical protein 2526103 10064566 Rpdx1_2349 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108673.1 2525153 R 652103 CDS YP_004108674.1 316933692 10064567 complement(2526228..2526467) 1 NC_014834.1 KEGG: nwi:Nwi_1692 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; 30S ribosomal protein S18 2526467 10064567 Rpdx1_2350 Rhodopseudomonas palustris DX-1 30S ribosomal protein S18 YP_004108674.1 2526228 R 652103 CDS YP_004108675.1 316933693 10064568 complement(2526473..2526949) 1 NC_014834.1 KEGG: nha:Nham_2355 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 2526949 10064568 Rpdx1_2351 Rhodopseudomonas palustris DX-1 30S ribosomal protein S6 YP_004108675.1 2526473 R 652103 CDS YP_004108676.1 316933694 10064569 2527663..2528622 1 NC_014834.1 KEGG: bja:blr4082 acyl-carrier-protein S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-acyl carrier protein transacylase 2528622 10064569 Rpdx1_2352 Rhodopseudomonas palustris DX-1 malonyl CoA-acyl carrier protein transacylase YP_004108676.1 2527663 D 652103 CDS YP_004108677.1 316933695 10064570 2528642..2529379 1 NC_014834.1 KEGG: nha:Nham_2353 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-(acyl-carrier-protein) reductase 2529379 10064570 Rpdx1_2353 Rhodopseudomonas palustris DX-1 3-oxoacyl-(acyl-carrier-protein) reductase YP_004108677.1 2528642 D 652103 CDS YP_004108678.1 316933696 10064571 2529684..2529923 1 NC_014834.1 KEGG: nwi:Nwi_1687 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; acyl carrier protein 2529923 10064571 Rpdx1_2354 Rhodopseudomonas palustris DX-1 acyl carrier protein YP_004108678.1 2529684 D 652103 CDS YP_004108679.1 316933697 10064572 2530020..2531285 1 NC_014834.1 KEGG: bbt:BBta_3820 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 2531285 10064572 Rpdx1_2355 Rhodopseudomonas palustris DX-1 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_004108679.1 2530020 D 652103 CDS YP_004108680.1 316933698 10064573 2531489..2532742 1 NC_014834.1 PFAM: aminodeoxychorismate lyase; KEGG: nha:Nham_2350 aminodeoxychorismate lyase; aminodeoxychorismate lyase 2532742 10064573 Rpdx1_2356 Rhodopseudomonas palustris DX-1 aminodeoxychorismate lyase YP_004108680.1 2531489 D 652103 CDS YP_004108681.1 316933699 10064574 2532845..2533732 1 NC_014834.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: bja:blr4087 hypothetical protein; YicC domain-containing protein 2533732 10064574 Rpdx1_2357 Rhodopseudomonas palustris DX-1 YicC domain-containing protein YP_004108681.1 2532845 D 652103 CDS YP_004108682.1 316933700 10064575 2533735..2534397 1 NC_014834.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: bra:BRADO3317 guanylate kinase; PFAM: guanylate kinase; guanylate kinase 2534397 10064575 Rpdx1_2358 Rhodopseudomonas palustris DX-1 guanylate kinase YP_004108682.1 2533735 D 652103 CDS YP_004108683.1 316933701 10064576 complement(2534402..2535598) 1 NC_014834.1 KEGG: nha:Nham_2347 hypothetical protein; hypothetical protein 2535598 10064576 Rpdx1_2359 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108683.1 2534402 R 652103 CDS YP_004108684.1 316933702 10064577 complement(2535767..2536825) 1 NC_014834.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bja:bll4101 putative NAD-dependent alcohol dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 2536825 10064577 Rpdx1_2360 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase GroES domain-containing protein YP_004108684.1 2535767 R 652103 CDS YP_004108685.1 316933703 10064578 complement(2536842..2537705) 1 NC_014834.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: bja:bll4102 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like; dimethyladenosine transferase 2537705 10064578 Rpdx1_2361 Rhodopseudomonas palustris DX-1 dimethyladenosine transferase YP_004108685.1 2536842 R 652103 CDS YP_004108686.1 316933704 10064579 complement(2537702..2538715) 1 NC_014834.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: bja:bll4103 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 2538715 10064579 Rpdx1_2362 Rhodopseudomonas palustris DX-1 4-hydroxythreonine-4-phosphate dehydrogenase YP_004108686.1 2537702 R 652103 CDS YP_004108687.1 316933705 10064580 complement(2538777..2539703) 1 NC_014834.1 PFAM: SurA domain; KEGG: nha:Nham_2343 hypothetical protein; SurA domain 2539703 10064580 Rpdx1_2363 Rhodopseudomonas palustris DX-1 SurA domain YP_004108687.1 2538777 R 652103 CDS YP_004108688.1 316933706 10064581 complement(2539778..2542297) 1 NC_014834.1 PFAM: Organic solvent tolerance protein; KEGG: nha:Nham_2342 organic solvent tolerance protein; organic solvent tolerance protein 2542297 10064581 Rpdx1_2364 Rhodopseudomonas palustris DX-1 organic solvent tolerance protein YP_004108688.1 2539778 R 652103 CDS YP_004108689.1 316933707 10064582 complement(2542297..2543382) 1 NC_014834.1 PFAM: permease YjgP/YjgQ family protein; KEGG: nha:Nham_2341 permease YjgP/YjgQ; YjgP/YjgQ family permease 2543382 10064582 Rpdx1_2365 Rhodopseudomonas palustris DX-1 YjgP/YjgQ family permease YP_004108689.1 2542297 R 652103 CDS YP_004108690.1 316933708 10064583 complement(2543396..2544562) 1 NC_014834.1 PFAM: permease YjgP/YjgQ family protein; KEGG: nha:Nham_2340 permease YjgP/YjgQ; YjgP/YjgQ family permease 2544562 10064583 Rpdx1_2366 Rhodopseudomonas palustris DX-1 YjgP/YjgQ family permease YP_004108690.1 2543396 R 652103 CDS YP_004108691.1 316933709 10064584 2544963..2546465 1 NC_014834.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: nha:Nham_2339 leucyl aminopeptidase; peptidase M17 leucyl aminopeptidase domain-containing protein 2546465 10064584 Rpdx1_2367 Rhodopseudomonas palustris DX-1 peptidase M17 leucyl aminopeptidase domain-containing protein YP_004108691.1 2544963 D 652103 CDS YP_004108692.1 316933710 10064585 2546475..2546927 1 NC_014834.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: bja:blr4109 DNA polymerase III subunit chi; DNA polymerase III subunit chi HolC 2546927 10064585 Rpdx1_2368 Rhodopseudomonas palustris DX-1 DNA polymerase III subunit chi HolC YP_004108692.1 2546475 D 652103 CDS YP_004108693.1 316933711 10064586 2546939..2547577 1 NC_014834.1 KEGG: oca:OCAR_6350 putative lipoprotein; hypothetical protein 2547577 10064586 Rpdx1_2369 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108693.1 2546939 D 652103 CDS YP_004108694.1 316933712 10064587 complement(2547800..2549677) 1 NC_014834.1 KEGG: bra:BRADO3331 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2549677 10064587 Rpdx1_2370 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108694.1 2547800 R 652103 CDS YP_004108695.1 316933713 10064588 2549823..2550245 1 NC_014834.1 PFAM: nucleoside diphosphate kinase; KEGG: bbt:BBta_3838 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase 2550245 10064588 Rpdx1_2371 Rhodopseudomonas palustris DX-1 nucleoside-diphosphate kinase YP_004108695.1 2549823 D 652103 CDS YP_004108696.1 316933714 10064589 2550320..2551141 1 NC_014834.1 PFAM: Integral membrane protein TerC; KEGG: bja:blr4120 hypothetical protein; integral membrane protein TerC 2551141 10064589 Rpdx1_2372 Rhodopseudomonas palustris DX-1 integral membrane protein TerC YP_004108696.1 2550320 D 652103 CDS YP_004108697.1 316933715 10064590 complement(2551222..2551995) 1 NC_014834.1 manually curated; KEGG: bja:blr1556 hypothetical protein; putative Crp/Fnr family transcriptional regulator 2551995 10064590 Rpdx1_2373 Rhodopseudomonas palustris DX-1 putative Crp/Fnr family transcriptional regulator YP_004108697.1 2551222 R 652103 CDS YP_004108698.1 316933716 10064591 2552477..2552680 1 NC_014834.1 KEGG: nwi:Nwi_1599 cold-shock protein, DNA-binding; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 2552680 10064591 Rpdx1_2374 Rhodopseudomonas palustris DX-1 cold-shock DNA-binding domain-containing protein YP_004108698.1 2552477 D 652103 CDS YP_004108699.1 316933717 10064592 complement(2552744..2553397) 1 NC_014834.1 KEGG: bra:BRADO3345 phosphoribosylglycinamide formyltransferase (GarT) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase); TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase 2553397 10064592 Rpdx1_2375 Rhodopseudomonas palustris DX-1 phosphoribosylglycinamide formyltransferase YP_004108699.1 2552744 R 652103 CDS YP_004108700.1 316933718 10064593 complement(2553406..2554479) 1 NC_014834.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: bbt:BBta_3852 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase 2554479 10064593 Rpdx1_2376 Rhodopseudomonas palustris DX-1 phosphoribosylformylglycinamidine cyclo-ligase YP_004108700.1 2553406 R 652103 CDS YP_004108701.1 316933719 10064594 2554743..2555288 1 NC_014834.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: nha:Nham_2117 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2555288 10064594 Rpdx1_2377 Rhodopseudomonas palustris DX-1 CDP-alcohol phosphatidyltransferase YP_004108701.1 2554743 D 652103 CDS YP_004108702.1 316933720 10064595 2555332..2556009 1 NC_014834.1 KEGG: bja:bll4123 hypothetical protein; hypothetical protein 2556009 10064595 Rpdx1_2378 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108702.1 2555332 D 652103 CDS YP_004108703.1 316933721 10064596 2556157..2558367 1 NC_014834.1 TIGRFAM: Polyphosphate kinase; KEGG: nwi:Nwi_1594 polyphosphate kinase; PFAM: Polyphosphate kinase; polyphosphate kinase 2558367 10064596 Rpdx1_2379 Rhodopseudomonas palustris DX-1 polyphosphate kinase YP_004108703.1 2556157 D 652103 CDS YP_004108704.1 316933722 10064597 2558380..2559885 1 NC_014834.1 PFAM: Ppx/GppA phosphatase; KEGG: bja:bll4121 hypothetical protein; Ppx/GppA phosphatase 2559885 10064597 Rpdx1_2380 Rhodopseudomonas palustris DX-1 Ppx/GppA phosphatase YP_004108704.1 2558380 D 652103 CDS YP_004108705.1 316933723 10064598 complement(2560124..2561047) 1 NC_014834.1 KEGG: ara:Arad_4066 hypothetical protein; hypothetical protein 2561047 10064598 Rpdx1_2381 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108705.1 2560124 R 652103 CDS YP_004108706.1 316933724 10064599 complement(2561059..2562222) 1 NC_014834.1 SMART: 3'-5' exonuclease; TIGRFAM: ribonuclease D; KEGG: bbt:BBta_3861 ribonuclease D (RNase D); PFAM: 3'-5' exonuclease; HRDC domain protein; ribonuclease D 2562222 10064599 Rpdx1_2382 Rhodopseudomonas palustris DX-1 ribonuclease D YP_004108706.1 2561059 R 652103 CDS YP_004108707.1 316933725 10064600 complement(2562325..2563803) 1 NC_014834.1 PFAM: protein of unknown function UPF0061; KEGG: bra:BRADO3358 hypothetical protein; hypothetical protein 2563803 10064600 Rpdx1_2383 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108707.1 2562325 R 652103 CDS YP_004108708.1 316933726 10064601 2564062..2565837 1 NC_014834.1 KEGG: nwi:Nwi_1588 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; aspartyl-tRNA synthetase 2565837 10064601 Rpdx1_2384 Rhodopseudomonas palustris DX-1 aspartyl-tRNA synthetase YP_004108708.1 2564062 D 652103 CDS YP_004108709.1 316933727 10064602 2565884..2568193 1 NC_014834.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: bbt:BBta_3876 malic enzyme; malic protein NAD-binding protein 2568193 10064602 Rpdx1_2385 Rhodopseudomonas palustris DX-1 malic protein NAD-binding protein YP_004108709.1 2565884 D 652103 CDS YP_004108710.1 316933728 10064603 2568306..2568743 1 NC_014834.1 PFAM: DoxX family protein; KEGG: nha:Nham_2109 DoxX; DoxX family protein 2568743 10064603 Rpdx1_2386 Rhodopseudomonas palustris DX-1 DoxX family protein YP_004108710.1 2568306 D 652103 CDS YP_004108711.1 316933729 10064604 complement(2568750..2569313) 1 NC_014834.1 KEGG: nha:Nham_2108 hypothetical protein; hypothetical protein 2569313 10064604 Rpdx1_2387 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108711.1 2568750 R 652103 CDS YP_004108712.1 316933730 10064605 complement(2569351..2570310) 1 NC_014834.1 PFAM: polysaccharide deacetylase; KEGG: nha:Nham_2107 polysaccharide deacetylase; polysaccharide deacetylase 2570310 10064605 Rpdx1_2388 Rhodopseudomonas palustris DX-1 polysaccharide deacetylase YP_004108712.1 2569351 R 652103 CDS YP_004108713.1 316933731 10064606 complement(2570467..2571975) 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: nha:Nham_2106 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2571975 10064606 Rpdx1_2389 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004108713.1 2570467 R 652103 CDS YP_004108714.1 316933732 10064607 2572186..2572731 1 NC_014834.1 PFAM: CreA family protein; KEGG: bja:blr4151 hypothetical protein; CreA family protein 2572731 10064607 Rpdx1_2390 Rhodopseudomonas palustris DX-1 CreA family protein YP_004108714.1 2572186 D 652103 CDS YP_004108715.1 316933733 10064608 complement(2572841..2573095) 1 NC_014834.1 hypothetical protein 2573095 10064608 Rpdx1_2391 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108715.1 2572841 R 652103 CDS YP_004108716.1 316933734 10064609 2573896..2574267 1 NC_014834.1 KEGG: bur:Bcep18194_B2513 glucose-methanol-choline oxidoreductase; hypothetical protein 2574267 10064609 Rpdx1_2392 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108716.1 2573896 D 652103 CDS YP_004108717.1 316933735 10064610 complement(2574295..2574555) 1 NC_014834.1 KEGG: nwi:Nwi_1582 hypothetical protein; hypothetical protein 2574555 10064610 Rpdx1_2393 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108717.1 2574295 R 652103 CDS YP_004108718.1 316933736 10064611 2574689..2575969 1 NC_014834.1 KEGG: bja:blr4156 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase 2575969 10064611 Rpdx1_2394 Rhodopseudomonas palustris DX-1 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase YP_004108718.1 2574689 D 652103 CDS YP_004108719.1 316933737 10064612 2576109..2576507 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bja:blr4161 hypothetical protein; thioesterase superfamily protein 2576507 10064612 Rpdx1_2395 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004108719.1 2576109 D 652103 CDS YP_004108720.1 316933738 10064613 2576762..2577385 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_3891 GNAT family acetyltransferase; N-acetyltransferase GCN5 2577385 10064613 Rpdx1_2396 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004108720.1 2576762 D 652103 CDS YP_004108721.1 316933739 10064614 complement(2577466..2577780) 1 NC_014834.1 KEGG: nwi:Nwi_1581 hypothetical protein; hypothetical protein 2577780 10064614 Rpdx1_2397 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108721.1 2577466 R 652103 CDS YP_004108722.1 316933740 10064615 complement(2577969..2578142) 1 NC_014834.1 PFAM: protein of unknown function DUF1328; KEGG: bja:bsl5717 hypothetical protein; hypothetical protein 2578142 10064615 Rpdx1_2398 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108722.1 2577969 R 652103 CDS YP_004108723.1 316933741 10064616 2578450..2579286 1 NC_014834.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: bja:blr4172 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 2579286 10064616 Rpdx1_2399 Rhodopseudomonas palustris DX-1 Sel1 domain-containing protein repeat-containing protein YP_004108723.1 2578450 D 652103 CDS YP_004108724.1 316933742 10064617 2579538..2581400 1 NC_014834.1 PFAM: K potassium transporter; KEGG: dar:Daro_1184 K+ potassium transporter; potassium transporter 2581400 10064617 Rpdx1_2400 Rhodopseudomonas palustris DX-1 potassium transporter YP_004108724.1 2579538 D 652103 CDS YP_004108725.1 316933743 10064618 complement(2581410..2582051) 1 NC_014834.1 PFAM: Abortive infection protein; KEGG: paa:Paes_1404 abortive infection protein; abortive infection protein 2582051 10064618 Rpdx1_2401 Rhodopseudomonas palustris DX-1 abortive infection protein YP_004108725.1 2581410 R 652103 CDS YP_004108726.1 316933744 10064619 complement(2582106..2582342) 1 NC_014834.1 KEGG: bja:bsr4396 hypothetical protein; hypothetical protein 2582342 10064619 Rpdx1_2402 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108726.1 2582106 R 652103 CDS YP_004108727.1 316933745 10064620 2582566..2582982 1 NC_014834.1 KEGG: bja:bll5535 hypothetical protein; hypothetical protein 2582982 10064620 Rpdx1_2403 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108727.1 2582566 D 652103 CDS YP_004108728.1 316933746 10064621 complement(2583157..2584326) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bbt:BBta_6701 putative diguanylate cyclase (GGDEF); SMART: GGDEF domain containing protein; diguanylate cyclase 2584326 10064621 Rpdx1_2404 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004108728.1 2583157 R 652103 CDS YP_004108729.1 316933747 10064622 complement(2584445..2585032) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: afw:Anae109_3254 TetR family transcriptional regulator; regulatory protein TetR 2585032 10064622 Rpdx1_2405 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004108729.1 2584445 R 652103 CDS YP_004108730.1 316933748 10064623 2585235..2586434 1 NC_014834.1 KEGG: vap:Vapar_2562 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 2586434 10064623 Rpdx1_2406 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004108730.1 2585235 D 652103 CDS YP_004108731.1 316933749 10064624 2586564..2589797 1 NC_014834.1 KEGG: mrd:Mrad2831_3044 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 2589797 10064624 Rpdx1_2407 Rhodopseudomonas palustris DX-1 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004108731.1 2586564 D 652103 CDS YP_004108732.1 316933750 10064625 complement(2589832..2591064) 1 NC_014834.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: bra:BRADO0861 carboxylate-amine ligase; glutamate--cysteine ligase 2591064 10064625 Rpdx1_2408 Rhodopseudomonas palustris DX-1 glutamate--cysteine ligase YP_004108732.1 2589832 R 652103 CDS YP_004108733.1 316933751 10064626 complement(2591054..2592793) 1 NC_014834.1 KEGG: bra:BRADO0860 asparagine synthetase; TIGRFAM: asparagine synthase family amidotransferase; asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; asparagine synthase family amidotransferase 2592793 10064626 Rpdx1_2409 Rhodopseudomonas palustris DX-1 asparagine synthase family amidotransferase YP_004108733.1 2591054 R 652103 CDS YP_004108734.1 316933752 10064627 complement(2592850..2593668) 1 NC_014834.1 KEGG: bra:BRADO0859 putative glutamine amidotransferase, class-II; putative glutamine amidotransferase, class-II 2593668 10064627 Rpdx1_2410 Rhodopseudomonas palustris DX-1 putative glutamine amidotransferase, class-II YP_004108734.1 2592850 R 652103 CDS YP_004108735.1 316933753 10064628 2593881..2594720 1 NC_014834.1 PFAM: UspA domain protein; KEGG: rmr:Rmar_0032 UspA domain protein; UspA domain-containing protein 2594720 10064628 Rpdx1_2411 Rhodopseudomonas palustris DX-1 UspA domain-containing protein YP_004108735.1 2593881 D 652103 CDS YP_004108736.1 316933754 10064629 2594980..2597856 1 NC_014834.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; Na+/H+ antiporter MnhB subunit-related protein; KEGG: jan:Jann_3715 putative monovalent cation/H+ antiporter subunit A; NADH/ubiquinone/plastoquinone 2597856 10064629 Rpdx1_2412 Rhodopseudomonas palustris DX-1 NADH/ubiquinone/plastoquinone YP_004108736.1 2594980 D 652103 CDS YP_004108737.1 316933755 10064630 2597858..2598226 1 NC_014834.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: tmz:Tmz1t_1101 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 2598226 10064630 Rpdx1_2413 Rhodopseudomonas palustris DX-1 NADH-ubiquinone oxidoreductase subunit 4L YP_004108737.1 2597858 D 652103 CDS YP_004108738.1 316933756 10064631 2598223..2599764 1 NC_014834.1 KEGG: tmz:Tmz1t_1102 NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) 2599764 10064631 Rpdx1_2414 Rhodopseudomonas palustris DX-1 NADH dehydrogenase (quinone) YP_004108738.1 2598223 D 652103 CDS YP_004108739.1 316933757 10064632 2599761..2600249 1 NC_014834.1 PFAM: cation antiporter; KEGG: jan:Jann_3718 putative monovalent cation/H+ antiporter subunit E; cation antiporter 2600249 10064632 Rpdx1_2415 Rhodopseudomonas palustris DX-1 cation antiporter YP_004108739.1 2599761 D 652103 CDS YP_004108740.1 316933758 10064633 2600246..2600515 1 NC_014834.1 PFAM: multiple resistance and pH regulation protein F; KEGG: dsh:Dshi_3809 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 2600515 10064633 Rpdx1_2416 Rhodopseudomonas palustris DX-1 multiple resistance and pH regulation protein F YP_004108740.1 2600246 D 652103 CDS YP_004108741.1 316933759 10064634 2600522..2600947 1 NC_014834.1 KEGG: pde:Pden_0702 monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 2600947 10064634 Rpdx1_2417 Rhodopseudomonas palustris DX-1 monovalent cation/proton antiporter subunit MnhG/PhaG YP_004108741.1 2600522 D 652103 CDS YP_004108742.1 316933760 10064635 complement(2601140..2602348) 1 NC_014834.1 KEGG: swo:Swol_0406 hypothetical protein; hypothetical protein 2602348 10064635 Rpdx1_2418 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108742.1 2601140 R 652103 CDS YP_004108743.1 316933761 10064636 complement(2602358..2603683) 1 NC_014834.1 KEGG: swo:Swol_0407 nitrogenase molybdenum-iron protein alpha and beta chains-like protein; nitrogenase molybdenum-iron protein alpha and beta chains-like protein 2603683 10064636 Rpdx1_2419 Rhodopseudomonas palustris DX-1 nitrogenase molybdenum-iron protein alpha and beta chains-like protein YP_004108743.1 2602358 R 652103 CDS YP_004108744.1 316933762 10064637 complement(2603680..2604471) 1 NC_014834.1 KEGG: dsy:DSY3569 nitrogenase subunit NifH; PFAM: NifH/frxC-family protein; nitrogenase 2604471 10064637 Rpdx1_2420 Rhodopseudomonas palustris DX-1 nitrogenase YP_004108744.1 2603680 R 652103 CDS YP_004108745.1 316933763 10064638 complement(2604555..2606846) 1 NC_014834.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: cff:CFF8240_1206 putative TonB-dependent receptor; TonB-dependent receptor plug 2606846 10064638 Rpdx1_2421 Rhodopseudomonas palustris DX-1 TonB-dependent receptor plug YP_004108745.1 2604555 R 652103 CDS YP_004108746.1 316933764 10064639 2607228..2608319 1 NC_014834.1 PFAM: periplasmic binding protein; KEGG: rle:RL2022 putative solute-binding component of cationic transporter; periplasmic-binding protein 2608319 10064639 Rpdx1_2422 Rhodopseudomonas palustris DX-1 periplasmic-binding protein YP_004108746.1 2607228 D 652103 CDS YP_004108747.1 316933765 10064640 2608316..2609407 1 NC_014834.1 PFAM: transport system permease protein; KEGG: pde:Pden_1169 transport system permease protein; transporter permease 2609407 10064640 Rpdx1_2423 Rhodopseudomonas palustris DX-1 transporter permease YP_004108747.1 2608316 D 652103 CDS YP_004108748.1 316933766 10064641 2609404..2610174 1 NC_014834.1 KEGG: pde:Pden_1170 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2610174 10064641 Rpdx1_2424 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108748.1 2609404 D 652103 CDS YP_004108749.1 316933767 10064642 complement(2610169..2610798) 1 NC_014834.1 KEGG: rlg:Rleg_1653 hypothetical protein; hypothetical protein 2610798 10064642 Rpdx1_2425 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108749.1 2610169 R 652103 CDS YP_004108750.1 316933768 10064643 complement(2610795..2611397) 1 NC_014834.1 KEGG: rha:RHA1_ro03621 hypothetical protein; hypothetical protein 2611397 10064643 Rpdx1_2426 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108750.1 2610795 R 652103 CDS YP_004108751.1 316933769 10064644 complement(2611414..2611941) 1 NC_014834.1 KEGG: rer:RER_36430 hypothetical protein; hypothetical protein 2611941 10064644 Rpdx1_2427 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108751.1 2611414 R 652103 CDS YP_004108752.1 316933770 10064645 2611981..2612103 1 NC_014834.1 hypothetical protein 2612103 10064645 Rpdx1_2428 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108752.1 2611981 D 652103 CDS YP_004108753.1 316933771 10064646 2612569..2613009 1 NC_014834.1 PFAM: cytochrome c class II; KEGG: bid:Bind_0112 cytochrome c prime; cytochrome c class II 2613009 10064646 Rpdx1_2429 Rhodopseudomonas palustris DX-1 cytochrome c class II YP_004108753.1 2612569 D 652103 CDS YP_004108754.1 316933772 10064647 2613013..2613687 1 NC_014834.1 KEGG: bid:Bind_0113 cytochrome b561; cytochrome b561 2613687 10064647 Rpdx1_2430 Rhodopseudomonas palustris DX-1 cytochrome b561 YP_004108754.1 2613013 D 652103 CDS YP_004108755.1 316933773 10064648 complement(2613771..2614229) 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: rfr:Rfer_3627 thioesterase superfamily protein; thioesterase superfamily protein 2614229 10064648 Rpdx1_2431 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004108755.1 2613771 R 652103 CDS YP_004108756.1 316933774 10064649 complement(2614378..2614752) 1 NC_014834.1 KEGG: pde:Pden_4695 hypothetical protein; hypothetical protein 2614752 10064649 Rpdx1_2432 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108756.1 2614378 R 652103 CDS YP_004108757.1 316933775 10064650 complement(2614764..2616071) 1 NC_014834.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dsh:Dshi_2526 putative sulfide quinone-rductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2616071 10064650 Rpdx1_2433 Rhodopseudomonas palustris DX-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004108757.1 2614764 R 652103 CDS YP_004108758.1 316933776 10064651 2616672..2618258 1 NC_014834.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: alv:Alvin_2499 cytochrome bd ubiquinol oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I 2618258 10064651 Rpdx1_2434 Rhodopseudomonas palustris DX-1 cytochrome bd ubiquinol oxidase subunit I YP_004108758.1 2616672 D 652103 CDS YP_004108759.1 316933777 10064652 2618275..2619426 1 NC_014834.1 KEGG: alv:Alvin_2500 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 2619426 10064652 Rpdx1_2435 Rhodopseudomonas palustris DX-1 cytochrome d ubiquinol oxidase subunit II YP_004108759.1 2618275 D 652103 CDS YP_004108760.1 316933778 10064653 2619439..2619591 1 NC_014834.1 KEGG: pha:PSHAa2020 hypothetical protein; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; cyd operon protein YbgT 2619591 10064653 Rpdx1_2436 Rhodopseudomonas palustris DX-1 cyd operon protein YbgT YP_004108760.1 2619439 D 652103 CDS YP_004108761.1 316933779 10064654 2619714..2621438 1 NC_014834.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: alv:Alvin_0482 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; SMART: AAA ATPase; cysteine ABC transporter permease/ATP-binding protein CydD 2621438 10064654 Rpdx1_2437 Rhodopseudomonas palustris DX-1 cysteine ABC transporter permease/ATP-binding protein CydD YP_004108761.1 2619714 D 652103 CDS YP_004108762.1 316933780 10064655 2621431..2623080 1 NC_014834.1 KEGG: alv:Alvin_0481 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; cysteine ABC transporter permease/ATP-binding protein CydC 2623080 10064655 Rpdx1_2438 Rhodopseudomonas palustris DX-1 cysteine ABC transporter permease/ATP-binding protein CydC YP_004108762.1 2621431 D 652103 CDS YP_004108763.1 316933781 10064656 2623550..2624437 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_4287 LysR family transcriptional regulator; LysR family transcriptional regulator 2624437 10064656 Rpdx1_2439 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004108763.1 2623550 D 652103 CDS YP_004108764.1 316933782 10064657 2624623..2625897 1 NC_014834.1 KEGG: bra:BRADO3420 4-aminobutyrate aminotransferase ((S)-3-amino-2-methylpropionate transaminase); TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; 4-aminobutyrate aminotransferase 2625897 10064657 Rpdx1_2440 Rhodopseudomonas palustris DX-1 4-aminobutyrate aminotransferase YP_004108764.1 2624623 D 652103 CDS YP_004108765.1 316933783 10064658 2625937..2627388 1 NC_014834.1 KEGG: bra:BRADO0028 succinate-semialdehyde dehydrogenase [NADP+] (SSDH); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinate-semialdehyde dehydrogenase 2627388 10064658 Rpdx1_2441 Rhodopseudomonas palustris DX-1 succinate-semialdehyde dehydrogenase YP_004108765.1 2625937 D 652103 CDS YP_004108766.1 316933784 10064659 2627438..2628736 1 NC_014834.1 KEGG: bbt:BBta_4285 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase 2628736 10064659 Rpdx1_2442 Rhodopseudomonas palustris DX-1 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase YP_004108766.1 2627438 D 652103 CDS YP_004108767.1 316933785 10064660 2628736..2630325 1 NC_014834.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rsk:RSKD131_4355 pyruvate decarboxylase; thiamine pyrophosphate domain-containing TPP-binding protein 2630325 10064660 Rpdx1_2443 Rhodopseudomonas palustris DX-1 thiamine pyrophosphate domain-containing TPP-binding protein YP_004108767.1 2628736 D 652103 CDS YP_004108768.1 316933786 10064661 2630404..2631993 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: azl:AZL_b03280 peptide/nickel transport system substrate-binding protein; family 5 extracellular solute-binding protein 2631993 10064661 Rpdx1_2444 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004108768.1 2630404 D 652103 CDS YP_004108769.1 316933787 10064662 2631990..2633012 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azl:AZL_b03270 peptide/nickel transport system permease protein; binding-protein-dependent transporter inner membrane component 2633012 10064662 Rpdx1_2445 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004108769.1 2631990 D 652103 CDS YP_004108770.1 316933788 10064663 2633025..2633864 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azl:AZL_b03260 peptide/nickel transport system permease protein; binding-protein-dependent transporter inner membrane component 2633864 10064663 Rpdx1_2446 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004108770.1 2633025 D 652103 CDS YP_004108771.1 316933789 10064664 2633861..2635519 1 NC_014834.1 KEGG: azl:AZL_b03250 peptide/nickel transport system ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter-like protein 2635519 10064664 Rpdx1_2447 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108771.1 2633861 D 652103 CDS YP_004108772.1 316933790 10064665 2635605..2637182 1 NC_014834.1 TIGRFAM: gamma-glutamyltransferase; KEGG: bbt:BBta_7627 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2637182 10064665 Rpdx1_2448 Rhodopseudomonas palustris DX-1 gamma-glutamyltransferase YP_004108772.1 2635605 D 652103 CDS YP_004108773.1 316933791 10064666 2637354..2638091 1 NC_014834.1 KEGG: ret:RHE_PB00040 hypothetical protein; hypothetical protein 2638091 10064666 Rpdx1_2449 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108773.1 2637354 D 652103 CDS YP_004108774.1 316933792 10064667 complement(2638002..2638982) 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: maq:Maqu_2810 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 2638982 10064667 Rpdx1_2450 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004108774.1 2638002 R 652103 CDS YP_004108775.1 316933793 10064668 complement(2639393..2640058) 1 NC_014834.1 PFAM: Protein of unknown function DUF1847; KEGG: cth:Cthe_2788 hypothetical protein; hypothetical protein 2640058 10064668 Rpdx1_2451 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108775.1 2639393 R 652103 CDS YP_004108776.1 316933794 10064669 2640451..2641536 1 NC_014834.1 KEGG: bja:bll6455 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 2641536 10064669 Rpdx1_2452 Rhodopseudomonas palustris DX-1 ABC transporter substrate-binding protein YP_004108776.1 2640451 D 652103 CDS YP_004108777.1 316933795 10064670 2641514..2642542 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll6454 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 2642542 10064670 Rpdx1_2453 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004108777.1 2641514 D 652103 CDS YP_004108778.1 316933796 10064671 2642536..2643327 1 NC_014834.1 KEGG: bra:BRADO4363 alkanesulfonate ABC transporter, ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2643327 10064671 Rpdx1_2454 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108778.1 2642536 D 652103 CDS YP_004108779.1 316933797 10064672 complement(2643346..2644191) 1 NC_014834.1 KEGG: bja:bll3359 hypothetical protein; hypothetical protein 2644191 10064672 Rpdx1_2455 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108779.1 2643346 R 652103 CDS YP_004108780.1 316933798 10064673 2644383..2644730 1 NC_014834.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: cvi:CV_0893 5-carboxymethyl-2-hydroxymuconate D-isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase 2644730 10064673 Rpdx1_2456 Rhodopseudomonas palustris DX-1 5-carboxymethyl-2-hydroxymuconate isomerase YP_004108780.1 2644383 D 652103 CDS YP_004108781.1 316933799 10064674 2644977..2646194 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: xau:Xaut_2408 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 2646194 10064674 Rpdx1_2457 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004108781.1 2644977 D 652103 CDS YP_004108782.1 316933800 10064675 2646544..2647188 1 NC_014834.1 KEGG: pde:Pden_0116 hexapaptide repeat-containing transferase; hexapeptide repeat-containing transferase 2647188 10064675 Rpdx1_2458 Rhodopseudomonas palustris DX-1 hexapeptide repeat-containing transferase YP_004108782.1 2646544 D 652103 CDS YP_004108783.1 316933801 10064676 2648575..2648841 1 NC_014834.1 PFAM: transposase IS3/IS911 family protein; KEGG: oan:Oant_4528 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2648841 10064676 Rpdx1_2459 Rhodopseudomonas palustris DX-1 transposase IS3/IS911 family protein YP_004108783.1 2648575 D 652103 CDS YP_004108784.1 316933802 10064677 2648835..2649764 1 NC_014834.1 PFAM: Integrase catalytic region; KEGG: oan:Oant_4683 integrase catalytic region; Integrase catalytic subunit 2649764 10064677 Rpdx1_2460 Rhodopseudomonas palustris DX-1 Integrase catalytic subunit YP_004108784.1 2648835 D 652103 CDS YP_004108785.1 316933803 10064678 complement(2649924..2650784) 1 NC_014834.1 PFAM: HPr serine kinase domain protein; KEGG: sli:Slin_1942 hypothetical protein; HPr serine kinase domain-containing protein 2650784 10064678 Rpdx1_2461 Rhodopseudomonas palustris DX-1 HPr serine kinase domain-containing protein YP_004108785.1 2649924 R 652103 CDS YP_004108786.1 316933804 10064679 complement(2650944..2651435) 1 NC_014834.1 PFAM: Domain of unknown function DUF1863; KEGG: bba:Bd1459 hypothetical protein; hypothetical protein 2651435 10064679 Rpdx1_2462 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108786.1 2650944 R 652103 CDS YP_004108787.1 316933805 10064680 complement(2651448..2652323) 1 NC_014834.1 KEGG: rec:RHECIAT_PB0000010 putative anthranilate synthase component I protein; putative anthranilate synthase component I protein 2652323 10064680 Rpdx1_2463 Rhodopseudomonas palustris DX-1 putative anthranilate synthase component I protein YP_004108787.1 2651448 R 652103 CDS YP_004108788.1 316933806 10064681 complement(2652729..2656502) 1 NC_014834.1 KEGG: bbt:BBta_4237 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase class II vitamin B12-dependent; ribonucleotide reductase large subunit; ribonucleoside-diphosphate reductase 2656502 10064681 Rpdx1_2464 Rhodopseudomonas palustris DX-1 ribonucleoside-diphosphate reductase YP_004108788.1 2652729 R 652103 CDS YP_004108789.1 316933807 10064682 2657168..2658067 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr4275 transport protein; hypothetical protein 2658067 10064682 Rpdx1_2465 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108789.1 2657168 D 652103 CDS YP_004108790.1 316933808 10064683 2658174..2659163 1 NC_014834.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bbt:BBta_4121 putative phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2659163 10064683 Rpdx1_2466 Rhodopseudomonas palustris DX-1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004108790.1 2658174 D 652103 CDS YP_004108791.1 316933809 10064684 2659362..2660792 1 NC_014834.1 PFAM: Amidase; KEGG: pla:Plav_3043 amidase; amidase 2660792 10064684 Rpdx1_2467 Rhodopseudomonas palustris DX-1 amidase YP_004108791.1 2659362 D 652103 CDS YP_004108792.1 316933810 10064685 2660882..2661460 1 NC_014834.1 KEGG: nwi:Nwi_1498 hypothetical protein; hypothetical protein 2661460 10064685 Rpdx1_2468 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108792.1 2660882 D 652103 CDS YP_004108793.1 316933811 10064686 2661607..2662737 1 NC_014834.1 KEGG: nha:Nham_2816 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; 8-amino-7-oxononanoate synthase 2662737 10064686 Rpdx1_2469 Rhodopseudomonas palustris DX-1 8-amino-7-oxononanoate synthase YP_004108793.1 2661607 D 652103 CDS YP_004108794.1 316933812 10064687 2662734..2663372 1 NC_014834.1 TIGRFAM: dethiobiotin synthase; KEGG: nha:Nham_2815 dithiobiotin synthetase; dethiobiotin synthase 2663372 10064687 Rpdx1_2470 Rhodopseudomonas palustris DX-1 dethiobiotin synthase YP_004108794.1 2662734 D 652103 CDS YP_004108795.1 316933813 10064688 2663369..2664652 1 NC_014834.1 KEGG: nha:Nham_2814 adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2664652 10064688 Rpdx1_2471 Rhodopseudomonas palustris DX-1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_004108795.1 2663369 D 652103 CDS YP_004108796.1 316933814 10064689 complement(2664843..2665454) 1 NC_014834.1 KEGG: xau:Xaut_4923 hypothetical protein; hypothetical protein 2665454 10064689 Rpdx1_2472 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108796.1 2664843 R 652103 CDS YP_004108797.1 316933815 10064690 complement(2665473..2666216) 1 NC_014834.1 PFAM: Transcriptional regulator TetR ; regulatory protein TetR; KEGG: bid:Bind_2883 TetR family transcriptional regulator; transcriptional regulator TetR 2666216 10064690 Rpdx1_2473 Rhodopseudomonas palustris DX-1 transcriptional regulator TetR YP_004108797.1 2665473 R 652103 CDS YP_004108798.1 316933816 10064691 complement(2666379..2667788) 1 NC_014834.1 KEGG: nha:Nham_2234 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase 2667788 10064691 Rpdx1_2474 Rhodopseudomonas palustris DX-1 glutamine synthetase YP_004108798.1 2666379 R 652103 CDS YP_004108799.1 316933817 10064692 complement(2667876..2668214) 1 NC_014834.1 PFAM: nitrogen regulatory protein P-II; KEGG: bja:blr4948 nitrogen regulatory protein PII; nitrogen regulatory protein P-II 2668214 10064692 Rpdx1_2475 Rhodopseudomonas palustris DX-1 nitrogen regulatory protein P-II YP_004108799.1 2667876 R 652103 CDS YP_004108800.1 316933818 10064693 2668618..2670117 1 NC_014834.1 KEGG: bra:BRADO4203 hypothetical protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; carbohydrate kinase 2670117 10064693 Rpdx1_2476 Rhodopseudomonas palustris DX-1 carbohydrate kinase YP_004108800.1 2668618 D 652103 CDS YP_004108801.1 316933819 10064694 complement(2670161..2671489) 1 NC_014834.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 1; KEGG: nha:Nham_2231 twin-arginine translocation pathway signal; multicopper oxidase type 2 2671489 10064694 Rpdx1_2477 Rhodopseudomonas palustris DX-1 multicopper oxidase type 2 YP_004108801.1 2670161 R 652103 CDS YP_004108802.1 316933820 10064696 2671871..2673229 1 NC_014834.1 KEGG: bja:bll4945 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain protein; trigger factor domain; peptidylprolyl isomerase FKBP-type; trigger factor 2673229 10064696 Rpdx1_2478 Rhodopseudomonas palustris DX-1 trigger factor YP_004108802.1 2671871 D 652103 CDS YP_004108803.1 316933821 10064697 2673539..2674177 1 NC_014834.1 KEGG: oca:OCAR_5908 Clp protease; PFAM: peptidase S14 ClpP; endopeptidase Clp 2674177 10064697 Rpdx1_2479 Rhodopseudomonas palustris DX-1 endopeptidase Clp YP_004108803.1 2673539 D 652103 CDS YP_004108804.1 316933822 10064698 2674564..2675838 1 NC_014834.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; KEGG: nha:Nham_2228 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX 2675838 10064698 Rpdx1_2480 Rhodopseudomonas palustris DX-1 ATP-dependent Clp protease ATP-binding subunit ClpX YP_004108804.1 2674564 D 652103 CDS YP_004108805.1 316933823 10064699 2676157..2678589 1 NC_014834.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: bra:BRADO4196 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATP-dependent protease La 2678589 10064699 Rpdx1_2481 Rhodopseudomonas palustris DX-1 ATP-dependent protease La YP_004108805.1 2676157 D 652103 CDS YP_004108806.1 316933824 10064700 complement(2678950..2681535) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: bja:blr4813 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 2681535 10064700 Rpdx1_2482 Rhodopseudomonas palustris DX-1 diguanylate cyclase/phosphodiesterase YP_004108806.1 2678950 R 652103 CDS YP_004108807.1 316933825 10064702 complement(2682106..2685246) 1 NC_014834.1 KEGG: azc:AZC_3305 hydrophobe/amphiphile efflux-1; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 2685246 10064702 Rpdx1_2483 Rhodopseudomonas palustris DX-1 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004108807.1 2682106 R 652103 CDS YP_004108808.1 316933826 10064703 complement(2685275..2686519) 1 NC_014834.1 KEGG: xau:Xaut_0513 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 2686519 10064703 Rpdx1_2484 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004108808.1 2685275 R 652103 CDS YP_004108809.1 316933827 10064704 complement(2686665..2687918) 1 NC_014834.1 TIGRFAM: peptidase T; KEGG: bra:BRADO4189 peptidase T; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase T 2687918 10064704 Rpdx1_2485 Rhodopseudomonas palustris DX-1 peptidase T YP_004108809.1 2686665 R 652103 CDS YP_004108810.1 316933828 10064705 complement(2688215..2688526) 1 NC_014834.1 KEGG: nha:Nham_2223 histone-like DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein 2688526 10064705 Rpdx1_2486 Rhodopseudomonas palustris DX-1 histone family protein DNA-binding protein YP_004108810.1 2688215 R 652103 CDS YP_004108811.1 316933829 10064707 complement(2688857..2689417) 1 NC_014834.1 KEGG: mes:Meso_1180 hypothetical protein; hypothetical protein 2689417 10064707 Rpdx1_2487 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108811.1 2688857 R 652103 CDS YP_004108812.1 316933830 10064708 complement(2689414..2690706) 1 NC_014834.1 KEGG: mes:Meso_1180 hypothetical protein; hypothetical protein 2690706 10064708 Rpdx1_2488 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108812.1 2689414 R 652103 CDS YP_004108813.1 316933831 10064709 complement(2690699..2690986) 1 NC_014834.1 KEGG: xau:Xaut_3596 hypothetical protein; hypothetical protein 2690986 10064709 Rpdx1_2489 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108813.1 2690699 R 652103 CDS YP_004108814.1 316933832 10064710 complement(2690997..2691332) 1 NC_014834.1 KEGG: mdo:100022193 similar to regenerating islet-derived 1 alpha (pancreatic stone protein, pancreatic thread protein); regenerating islet-derived 1 alpha-like protein 2691332 10064710 Rpdx1_2490 Rhodopseudomonas palustris DX-1 regenerating islet-derived 1 alpha-like protein YP_004108814.1 2690997 R 652103 CDS YP_004108815.1 316933833 10064711 complement(2691329..2691616) 1 NC_014834.1 KEGG: bid:Bind_2963 aldo/keto reductase; aldo/keto reductase 2691616 10064711 Rpdx1_2491 Rhodopseudomonas palustris DX-1 aldo/keto reductase YP_004108815.1 2691329 R 652103 CDS YP_004108816.1 316933834 10064712 complement(2691622..2691897) 1 NC_014834.1 KEGG: azo:azo2662 hypothetical protein; hypothetical protein 2691897 10064712 Rpdx1_2492 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108816.1 2691622 R 652103 CDS YP_004108817.1 316933835 10064713 complement(2691894..2692130) 1 NC_014834.1 KEGG: tac:Ta0451m AAA family ATPase; hypothetical protein 2692130 10064713 Rpdx1_2493 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108817.1 2691894 R 652103 CDS YP_004108818.1 316933836 10064714 complement(2692133..2692333) 1 NC_014834.1 KEGG: osa:4346753 hypothetical protein; hypothetical protein 2692333 10064714 Rpdx1_2494 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108818.1 2692133 R 652103 CDS YP_004108819.1 316933837 10064715 complement(2692339..2692797) 1 NC_014834.1 KEGG: cak:Caul_2278 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2692797 10064715 Rpdx1_2495 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004108819.1 2692339 R 652103 CDS YP_004108820.1 316933838 10064716 complement(2692794..2693270) 1 NC_014834.1 KEGG: mea:Mex_1p3949 hypothetical protein; hypothetical protein 2693270 10064716 Rpdx1_2496 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108820.1 2692794 R 652103 CDS YP_004108821.1 316933839 10064717 complement(2693273..2693536) 1 NC_014834.1 KEGG: rop:ROP_45740 putative fatty-acid--CoA ligase; hypothetical protein 2693536 10064717 Rpdx1_2497 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108821.1 2693273 R 652103 CDS YP_004108822.1 316933840 10064718 2693848..2694219 1 NC_014834.1 KEGG: mva:Mvan_3805 cobalt transport protein; hypothetical protein 2694219 10064718 Rpdx1_2498 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108822.1 2693848 D 652103 CDS YP_004108823.1 316933841 10064719 complement(2694191..2694415) 1 NC_014834.1 KEGG: eba:ebA2185 hypothetical protein; hypothetical protein 2694415 10064719 Rpdx1_2499 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108823.1 2694191 R 652103 CDS YP_004108824.1 316933842 10064720 complement(2694412..2694714) 1 NC_014834.1 KEGG: hba:Hbal_1124 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2694714 10064720 Rpdx1_2500 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004108824.1 2694412 R 652103 CDS YP_004108825.1 316933843 10064721 2694799..2695068 1 NC_014834.1 KEGG: tai:Taci_1585 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2695068 10064721 Rpdx1_2501 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004108825.1 2694799 D 652103 CDS YP_004108826.1 316933844 10064722 2695215..2695454 1 NC_014834.1 KEGG: gob:Gobs_4404 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; hypothetical protein 2695454 10064722 Rpdx1_2502 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108826.1 2695215 D 652103 CDS YP_004108827.1 316933845 10064723 complement(2695578..2695835) 1 NC_014834.1 KEGG: oca:OCAR_6085 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 2695835 10064723 Rpdx1_2503 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis protein YP_004108827.1 2695578 R 652103 CDS YP_004108828.1 316933846 10064724 2696007..2697137 1 NC_014834.1 KEGG: nfa:nfa13520 hypothetical protein; hypothetical protein 2697137 10064724 Rpdx1_2504 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108828.1 2696007 D 652103 CDS YP_004108829.1 316933847 10064725 2697137..2697457 1 NC_014834.1 KEGG: sth:STH3129 3-deoxy-7-phosphoheptulonate synthase; hypothetical protein 2697457 10064725 Rpdx1_2505 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108829.1 2697137 D 652103 CDS YP_004108830.1 316933848 10064726 2697457..2697699 1 NC_014834.1 hypothetical protein 2697699 10064726 Rpdx1_2506 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108830.1 2697457 D 652103 CDS YP_004108831.1 316933849 10064727 2697696..2697977 1 NC_014834.1 KEGG: cin:100187255 similar to Chromosome 7 open reading frame 28B; hypothetical protein 2697977 10064727 Rpdx1_2507 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108831.1 2697696 D 652103 CDS YP_004108832.1 316933850 10064728 2697981..2698265 1 NC_014834.1 PFAM: Protein of unknown function DUF2312; KEGG: nha:Nham_1221 hypothetical protein; hypothetical protein 2698265 10064728 Rpdx1_2508 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108832.1 2697981 D 652103 CDS YP_004108833.1 316933851 10064729 2698265..2698873 1 NC_014834.1 KEGG: azl:AZL_020190 hypothetical protein; hypothetical protein 2698873 10064729 Rpdx1_2509 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108833.1 2698265 D 652103 CDS YP_004108834.1 316933852 10064730 2699221..2699412 1 NC_014834.1 hypothetical protein 2699412 10064730 Rpdx1_2510 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108834.1 2699221 D 652103 CDS YP_004108835.1 316933853 10064731 2699701..2700267 1 NC_014834.1 KEGG: kra:Krad_1254 homoserine kinase; hypothetical protein 2700267 10064731 Rpdx1_2511 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108835.1 2699701 D 652103 CDS YP_004108836.1 316933854 10064732 2700617..2701543 1 NC_014834.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: aac:Aaci_2995 integrase family protein; integrase family protein 2701543 10064732 Rpdx1_2512 Rhodopseudomonas palustris DX-1 integrase family protein YP_004108836.1 2700617 D 652103 CDS YP_004108837.1 316933855 10064733 2701543..2702217 1 NC_014834.1 KEGG: ret:RHE_CH01104 hypothetical protein; hypothetical protein 2702217 10064733 Rpdx1_2513 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108837.1 2701543 D 652103 CDS YP_004108838.1 316933856 10064734 complement(2702342..2702848) 1 NC_014834.1 KEGG: mmi:MMAR_4596 hypothetical protein; hypothetical protein 2702848 10064734 Rpdx1_2514 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108838.1 2702342 R 652103 CDS YP_004108839.1 316933857 10064735 complement(2702848..2703114) 1 NC_014834.1 KEGG: hypothetical protein; hypothetical protein 2703114 10064735 Rpdx1_2515 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108839.1 2702848 R 652103 CDS YP_004108840.1 316933858 10064736 2703274..2703525 1 NC_014834.1 KEGG: cbi:CLJ_B1819 gp9; hypothetical protein 2703525 10064736 Rpdx1_2516 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108840.1 2703274 D 652103 CDS YP_004108841.1 316933859 10064737 2703577..2704128 1 NC_014834.1 KEGG: bcj:BCAL2888 ribonuclease E 1; hypothetical protein 2704128 10064737 Rpdx1_2517 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108841.1 2703577 D 652103 CDS YP_004108842.1 316933860 10064738 2704180..2704581 1 NC_014834.1 PFAM: Terminase small subunit; KEGG: smd:Smed_1897 phage terminase small subunit; terminase small subunit 2704581 10064738 Rpdx1_2518 Rhodopseudomonas palustris DX-1 terminase small subunit YP_004108842.1 2704180 D 652103 CDS YP_004108843.1 316933861 10064739 2704556..2706070 1 NC_014834.1 KEGG: mlo:mll0463 bacteriophage terminase large subunit-like protein; bacteriophage terminase large subunit-like protein 2706070 10064739 Rpdx1_2519 Rhodopseudomonas palustris DX-1 bacteriophage terminase large subunit-like protein YP_004108843.1 2704556 D 652103 CDS YP_004108844.1 316933862 10064740 2706070..2708382 1 NC_014834.1 KEGG: mlo:mll0462 hypothetical protein; hypothetical protein 2708382 10064740 Rpdx1_2520 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108844.1 2706070 D 652103 CDS YP_004108845.1 316933863 10064741 2708382..2708732 1 NC_014834.1 KEGG: mlo:mll0459 hypothetical protein; hypothetical protein 2708732 10064741 Rpdx1_2521 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108845.1 2708382 D 652103 CDS YP_004108846.1 316933864 10064742 2708792..2710027 1 NC_014834.1 KEGG: mlo:mll0458 hypothetical protein; hypothetical protein 2710027 10064742 Rpdx1_2522 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108846.1 2708792 D 652103 CDS YP_004108847.1 316933865 10064743 2710052..2711071 1 NC_014834.1 KEGG: mlo:mll0457 hypothetical protein; hypothetical protein 2711071 10064743 Rpdx1_2523 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108847.1 2710052 D 652103 CDS YP_004108848.1 316933866 10064744 2711160..2711675 1 NC_014834.1 KEGG: mlo:mll0455 hypothetical protein; hypothetical protein 2711675 10064744 Rpdx1_2524 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108848.1 2711160 D 652103 CDS YP_004108849.1 316933867 10064745 2711688..2711852 1 NC_014834.1 hypothetical protein 2711852 10064745 Rpdx1_2525 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108849.1 2711688 D 652103 CDS YP_004108850.1 316933868 10064746 2711935..2712711 1 NC_014834.1 KEGG: mlo:mll0454 hypothetical protein; hypothetical protein 2712711 10064746 Rpdx1_2526 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108850.1 2711935 D 652103 CDS YP_004108851.1 316933869 10064747 2712708..2713409 1 NC_014834.1 KEGG: mlo:mll0453 hypothetical protein; hypothetical protein 2713409 10064747 Rpdx1_2527 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108851.1 2712708 D 652103 CDS YP_004108852.1 316933870 10064748 2713409..2715085 1 NC_014834.1 KEGG: mlo:mll0452 hypothetical protein; hypothetical protein 2715085 10064748 Rpdx1_2528 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108852.1 2713409 D 652103 CDS YP_004108853.1 316933871 10064749 2715082..2715465 1 NC_014834.1 KEGG: mes:Meso_0236 hypothetical protein; hypothetical protein 2715465 10064749 Rpdx1_2529 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108853.1 2715082 D 652103 CDS YP_004108854.1 316933872 10064750 2715468..2716493 1 NC_014834.1 KEGG: ret:RHE_CH01103 hypothetical protein; hypothetical protein 2716493 10064750 Rpdx1_2530 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108854.1 2715468 D 652103 CDS YP_004108855.1 316933873 10064751 2716493..2718238 1 NC_014834.1 PFAM: cell wall hydrolase SleB; KEGG: mea:Mex_1p4005 hypothetical protein; cell wall hydrolase SleB 2718238 10064751 Rpdx1_2531 Rhodopseudomonas palustris DX-1 cell wall hydrolase SleB YP_004108855.1 2716493 D 652103 CDS YP_004108856.1 316933874 10064752 2718239..2720401 1 NC_014834.1 KEGG: mea:Mex_1p4005 hypothetical protein; hypothetical protein 2720401 10064752 Rpdx1_2532 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108856.1 2718239 D 652103 CDS YP_004108857.1 316933875 10064753 2720676..2721470 1 NC_014834.1 TIGRFAM: methyltransferase FkbM family; KEGG: acr:Acry_1567 FkbM family methyltransferase; FkbM family methyltransferase 2721470 10064753 Rpdx1_2533 Rhodopseudomonas palustris DX-1 FkbM family methyltransferase YP_004108857.1 2720676 D 652103 CDS YP_004108858.1 316933876 10064754 2721553..2722434 1 NC_014834.1 KEGG: mes:Meso_0240 microcystin-dependent protein-like; hypothetical protein 2722434 10064754 Rpdx1_2534 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108858.1 2721553 D 652103 CDS YP_004108859.1 316933877 10064755 2722438..2724417 1 NC_014834.1 KEGG: ptr:745467 mucin 19, oligomeric; hypothetical protein 2724417 10064755 Rpdx1_2535 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108859.1 2722438 D 652103 CDS YP_004108860.1 316933878 10064756 2724492..2724764 1 NC_014834.1 KEGG: rlt:Rleg2_0750 hypothetical protein; hypothetical protein 2724764 10064756 Rpdx1_2536 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108860.1 2724492 D 652103 CDS YP_004108861.1 316933879 10064757 2724761..2725309 1 NC_014834.1 PFAM: glycoside hydrolase family 24; KEGG: bmj:BMULJ_04616 bacteriophage lysozyme; glycoside hydrolase family protein 2725309 10064757 Rpdx1_2537 Rhodopseudomonas palustris DX-1 glycoside hydrolase family protein YP_004108861.1 2724761 D 652103 CDS YP_004108862.1 316933880 10064758 2725314..2725811 1 NC_014834.1 KEGG: nha:Nham_3316 hypothetical protein; hypothetical protein 2725811 10064758 Rpdx1_2538 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108862.1 2725314 D 652103 CDS YP_004108863.1 316933881 10064759 2725759..2726028 1 NC_014834.1 KEGG: lbz:LbrM11_V2.0500 hypothetical protein; hypothetical protein 2726028 10064759 Rpdx1_2539 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108863.1 2725759 D 652103 CDS YP_004108864.1 316933882 10064760 2726025..2726312 1 NC_014834.1 KEGG: PspC domain-containing protein; hypothetical protein 2726312 10064760 Rpdx1_2540 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108864.1 2726025 D 652103 CDS YP_004108865.1 316933883 10064761 complement(2726380..2726760) 1 NC_014834.1 KEGG: aav:Aave_1732 hypothetical protein; hypothetical protein 2726760 10064761 Rpdx1_2541 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108865.1 2726380 R 652103 CDS YP_004108866.1 316933884 10064762 complement(2726747..2726917) 1 NC_014834.1 KEGG: xtr:780387 MORC family CW-type zinc finger 3; hypothetical protein 2726917 10064762 Rpdx1_2542 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108866.1 2726747 R 652103 CDS YP_004108867.1 316933885 10064763 complement(2726914..2727291) 1 NC_014834.1 KEGG: aav:Aave_2362 hypothetical protein; hypothetical protein 2727291 10064763 Rpdx1_2543 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108867.1 2726914 R 652103 CDS YP_004108868.1 316933886 10064764 complement(2727295..2727684) 1 NC_014834.1 KEGG: bbu:BB_L40 ErpO; hypothetical protein 2727684 10064764 Rpdx1_2544 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108868.1 2727295 R 652103 CDS YP_004108869.1 316933887 10064765 complement(2727859..2728080) 1 NC_014834.1 KEGG: sti:Sthe_1477 hypothetical protein; hypothetical protein 2728080 10064765 Rpdx1_2545 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108869.1 2727859 R 652103 CDS YP_004108870.1 316933888 10064767 complement(2728738..2729562) 1 NC_014834.1 KEGG: xau:Xaut_3687 hypothetical protein; hypothetical protein 2729562 10064767 Rpdx1_2547 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108870.1 2728738 R 652103 CDS YP_004108871.1 316933889 10064769 complement(2729855..2730358) 1 NC_014834.1 KEGG: sro:Sros_3239 hypothetical protein; hypothetical protein 2730358 10064769 Rpdx1_2549 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108871.1 2729855 R 652103 CDS YP_004108872.1 316933890 10064770 complement(2730940..2731134) 1 NC_014834.1 KEGG: bja:bsl2206 hypothetical protein; hypothetical protein 2731134 10064770 Rpdx1_2550 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108872.1 2730940 R 652103 CDS YP_004108873.1 316933891 10064771 2731445..2731810 1 NC_014834.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: oca:OCAR_5922 NADH dehydrogenase subunit A; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 2731810 10064771 Rpdx1_2551 Rhodopseudomonas palustris DX-1 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 YP_004108873.1 2731445 D 652103 CDS YP_004108874.1 316933892 10064772 2731822..2732418 1 NC_014834.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: bja:bll4918 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 2732418 10064772 Rpdx1_2552 Rhodopseudomonas palustris DX-1 NADH-quinone oxidoreductase subunit B YP_004108874.1 2731822 D 652103 CDS YP_004108875.1 316933893 10064773 2732432..2733046 1 NC_014834.1 KEGG: nwi:Nwi_1886 NADH dehydrogenase subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH (or F420H2) dehydrogenase subunit C 2733046 10064773 Rpdx1_2553 Rhodopseudomonas palustris DX-1 NADH (or F420H2) dehydrogenase subunit C YP_004108875.1 2732432 D 652103 CDS YP_004108876.1 316933894 10064774 2733098..2734306 1 NC_014834.1 TIGRFAM: NADH dehydrogenase I, D subunit; KEGG: nwi:Nwi_1885 NADH dehydrogenase subunit D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I subunit D 2734306 10064774 Rpdx1_2554 Rhodopseudomonas palustris DX-1 NADH dehydrogenase I subunit D YP_004108876.1 2733098 D 652103 CDS YP_004108877.1 316933895 10064775 2734303..2735274 1 NC_014834.1 TIGRFAM: methyltransferase FkbM family; KEGG: nwi:Nwi_1884 methyltransferase FkbM; FkbM family methyltransferase 2735274 10064775 Rpdx1_2555 Rhodopseudomonas palustris DX-1 FkbM family methyltransferase YP_004108877.1 2734303 D 652103 CDS YP_004108878.1 316933896 10064776 2735277..2736026 1 NC_014834.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; KEGG: oca:OCAR_5927 NADH dehydrogenase subunit E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E 2736026 10064776 Rpdx1_2556 Rhodopseudomonas palustris DX-1 NADH-quinone oxidoreductase subunit E YP_004108878.1 2735277 D 652103 CDS YP_004108879.1 316933897 10064777 2736023..2736238 1 NC_014834.1 KEGG: bra:BRADO4180 hypothetical protein; hypothetical protein 2736238 10064777 Rpdx1_2557 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108879.1 2736023 D 652103 CDS YP_004108880.1 316933898 10064778 2736257..2737582 1 NC_014834.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: oca:OCAR_5928 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F 2737582 10064778 Rpdx1_2558 Rhodopseudomonas palustris DX-1 NADH-quinone oxidoreductase subunit F YP_004108880.1 2736257 D 652103 CDS YP_004108881.1 316933899 10064779 2737588..2739663 1 NC_014834.1 KEGG: nha:Nham_2214 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: molybdopterin oxidoreductase; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; NADH-quinone oxidoreductase chain G; NADH-quinone oxidoreductase subunit G 2739663 10064779 Rpdx1_2559 Rhodopseudomonas palustris DX-1 NADH-quinone oxidoreductase subunit G YP_004108881.1 2737588 D 652103 CDS YP_004108882.1 316933900 10064780 2739673..2740698 1 NC_014834.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: nha:Nham_2213 NADH dehydrogenase subunit H; respiratory-chain NADH dehydrogenase subunit 1 2740698 10064780 Rpdx1_2560 Rhodopseudomonas palustris DX-1 respiratory-chain NADH dehydrogenase subunit 1 YP_004108882.1 2739673 D 652103 CDS YP_004108883.1 316933901 10064781 2740706..2741194 1 NC_014834.1 KEGG: nwi:Nwi_1879 NADH dehydrogenase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH-quinone oxidoreductase subunit I 2741194 10064781 Rpdx1_2561 Rhodopseudomonas palustris DX-1 NADH-quinone oxidoreductase subunit I YP_004108883.1 2740706 D 652103 CDS YP_004108884.1 316933902 10064782 2741204..2741842 1 NC_014834.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: nwi:Nwi_1878 NADH dehydrogenase subunit J; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 2741842 10064782 Rpdx1_2562 Rhodopseudomonas palustris DX-1 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 YP_004108884.1 2741204 D 652103 CDS YP_004108885.1 316933903 10064783 2741839..2742150 1 NC_014834.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: oca:OCAR_5933 NADH dehydrogenase subunit K; NADH-ubiquinone oxidoreductase subunit 4L 2742150 10064783 Rpdx1_2563 Rhodopseudomonas palustris DX-1 NADH-ubiquinone oxidoreductase subunit 4L YP_004108885.1 2741839 D 652103 CDS YP_004108886.1 316933904 10064784 2742210..2744327 1 NC_014834.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: bja:bll4906 NADH dehydrogenase subunit L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 2744327 10064784 Rpdx1_2564 Rhodopseudomonas palustris DX-1 proton-translocating NADH-quinone oxidoreductase subunit L YP_004108886.1 2742210 D 652103 CDS YP_004108887.1 316933905 10064785 2744328..2745845 1 NC_014834.1 KEGG: bbt:BBta_4549 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 2745845 10064785 Rpdx1_2565 Rhodopseudomonas palustris DX-1 proton-translocating NADH-quinone oxidoreductase subunit M YP_004108887.1 2744328 D 652103 CDS YP_004108888.1 316933906 10064786 2745865..2747304 1 NC_014834.1 KEGG: bja:bll4904 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 2747304 10064786 Rpdx1_2566 Rhodopseudomonas palustris DX-1 proton-translocating NADH-quinone oxidoreductase subunit N YP_004108888.1 2745865 D 652103 CDS YP_004108889.1 316933907 10064787 2747305..2748111 1 NC_014834.1 KEGG: bja:bll4903 biotin--protein ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; biotin--acetyl-CoA-carboxylase ligase 2748111 10064787 Rpdx1_2567 Rhodopseudomonas palustris DX-1 biotin--acetyl-CoA-carboxylase ligase YP_004108889.1 2747305 D 652103 CDS YP_004108890.1 316933908 10064788 2748111..2749781 1 NC_014834.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: bra:BRADO4169 metallo-beta-lactamase family hydrolase; RNA-metabolising metallo-beta-lactamase 2749781 10064788 Rpdx1_2568 Rhodopseudomonas palustris DX-1 RNA-metabolising metallo-beta-lactamase YP_004108890.1 2748111 D 652103 CDS YP_004108891.1 316933909 10064789 2749822..2750226 1 NC_014834.1 TIGRFAM: methylmalonyl-CoA epimerase; KEGG: bbt:BBta_4545 methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; methylmalonyl-CoA epimerase 2750226 10064789 Rpdx1_2569 Rhodopseudomonas palustris DX-1 methylmalonyl-CoA epimerase YP_004108891.1 2749822 D 652103 CDS YP_004108892.1 316933910 10064790 2750230..2750511 1 NC_014834.1 PFAM: protein of unknown function DUF1467; KEGG: bra:BRADO4167 hypothetical protein; hypothetical protein 2750511 10064790 Rpdx1_2570 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108892.1 2750230 D 652103 CDS YP_004108893.1 316933911 10064791 2751100..2751504 1 NC_014834.1 KEGG: bra:BRADO4161 putative signal peptide; hypothetical protein 2751504 10064791 Rpdx1_2571 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108893.1 2751100 D 652103 CDS YP_004108894.1 316933912 10064792 2751623..2752162 1 NC_014834.1 PFAM: protein of unknown function DUF461; KEGG: bja:bll4880 hypothetical protein; hypothetical protein 2752162 10064792 Rpdx1_2572 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108894.1 2751623 D 652103 CDS YP_004108895.1 316933913 10064793 2752162..2752689 1 NC_014834.1 PFAM: nuclear export factor GLE1; KEGG: nha:Nham_2199 nuclear export factor GLE1; nuclear export factor GLE1 2752689 10064793 Rpdx1_2573 Rhodopseudomonas palustris DX-1 nuclear export factor GLE1 YP_004108895.1 2752162 D 652103 CDS YP_004108896.1 316933914 10064794 2752686..2754284 1 NC_014834.1 PFAM: copper resistance protein CopC; KEGG: nha:Nham_2198 copper resistance D; copper resistance protein CopC 2754284 10064794 Rpdx1_2574 Rhodopseudomonas palustris DX-1 copper resistance protein CopC YP_004108896.1 2752686 D 652103 CDS YP_004108897.1 316933915 10064795 2754460..2755779 1 NC_014834.1 KEGG: bja:bll4877 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; prolyl-tRNA synthetase 2755779 10064795 Rpdx1_2575 Rhodopseudomonas palustris DX-1 prolyl-tRNA synthetase YP_004108897.1 2754460 D 652103 CDS YP_004108898.1 316933916 10064796 2755868..2757136 1 NC_014834.1 KEGG: nha:Nham_2196 LolC/E family lipoprotein releasing system, transmembrane protein; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; lipoprotein releasing system transmembrane protein 2757136 10064796 Rpdx1_2576 Rhodopseudomonas palustris DX-1 lipoprotein releasing system transmembrane protein YP_004108898.1 2755868 D 652103 CDS YP_004108899.1 316933917 10064797 2757147..2757845 1 NC_014834.1 KEGG: bja:bll4875 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 2757845 10064797 Rpdx1_2577 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004108899.1 2757147 D 652103 CDS YP_004108900.1 316933918 10064800 2758861..2758959 1 NC_014834.1 KEGG: bra:BRADO4146 hypothetical protein; hypothetical protein 2758959 10064800 Rpdx1_2580 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108900.1 2758861 D 652103 CDS YP_004108901.1 316933919 10064801 2759133..2762588 1 NC_014834.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: bra:BRADO4145 DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III subunit alpha 2762588 10064801 Rpdx1_2581 Rhodopseudomonas palustris DX-1 DNA polymerase III subunit alpha YP_004108901.1 2759133 D 652103 CDS YP_004108902.1 316933920 10064802 2762747..2765182 1 NC_014834.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bja:bll4862 hypothetical protein; peptidase C14 caspase catalytic subunit p20 2765182 10064802 Rpdx1_2582 Rhodopseudomonas palustris DX-1 peptidase C14 caspase catalytic subunit p20 YP_004108902.1 2762747 D 652103 CDS YP_004108903.1 316933921 10064803 2765440..2766435 1 NC_014834.1 KEGG: nha:Nham_1694 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; 30S ribosomal protein S2 2766435 10064803 Rpdx1_2583 Rhodopseudomonas palustris DX-1 30S ribosomal protein S2 YP_004108903.1 2765440 D 652103 CDS YP_004108904.1 316933922 10064804 2766560..2767486 1 NC_014834.1 KEGG: bja:bll4860 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; translation elongation factor Ts 2767486 10064804 Rpdx1_2584 Rhodopseudomonas palustris DX-1 translation elongation factor Ts YP_004108904.1 2766560 D 652103 CDS YP_004108905.1 316933923 10064805 2767559..2768275 1 NC_014834.1 KEGG: bbt:BBta_4515 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase 2768275 10064805 Rpdx1_2585 Rhodopseudomonas palustris DX-1 uridylate kinase YP_004108905.1 2767559 D 652103 CDS YP_004108906.1 316933924 10064806 2768339..2768899 1 NC_014834.1 KEGG: nwi:Nwi_1856 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; ribosome recycling factor 2768899 10064806 Rpdx1_2586 Rhodopseudomonas palustris DX-1 ribosome recycling factor YP_004108906.1 2768339 D 652103 CDS YP_004108907.1 316933925 10064807 2769108..2769866 1 NC_014834.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: nha:Nham_1698 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 2769866 10064807 Rpdx1_2587 Rhodopseudomonas palustris DX-1 undecaprenyl diphosphate synthase YP_004108907.1 2769108 D 652103 CDS YP_004108908.1 316933926 10064808 2769872..2770720 1 NC_014834.1 PFAM: phosphatidate cytidylyltransferase; KEGG: nha:Nham_1699 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 2770720 10064808 Rpdx1_2588 Rhodopseudomonas palustris DX-1 phosphatidate cytidylyltransferase YP_004108908.1 2769872 D 652103 CDS YP_004108909.1 316933927 10064809 2770725..2771948 1 NC_014834.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: bbt:BBta_4511 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2771948 10064809 Rpdx1_2589 Rhodopseudomonas palustris DX-1 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_004108909.1 2770725 D 652103 CDS YP_004108910.1 316933928 10064810 2771993..2773144 1 NC_014834.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: nwi:Nwi_1852 peptidase M50, putative membrane-associated zinc metallopeptidase; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 2773144 10064810 Rpdx1_2590 Rhodopseudomonas palustris DX-1 membrane-associated zinc metalloprotease YP_004108910.1 2771993 D 652103 CDS YP_004108911.1 316933929 10064811 2773317..2775857 1 NC_014834.1 KEGG: bbt:BBta_4509 surface antigen domain-containing protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; outer membrane protein assembly complex, YaeT protein 2775857 10064811 Rpdx1_2591 Rhodopseudomonas palustris DX-1 outer membrane protein assembly complex, YaeT protein YP_004108911.1 2773317 D 652103 CDS YP_004108912.1 316933930 10064812 2775990..2777072 1 NC_014834.1 KEGG: bja:bll4852 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 2777072 10064812 Rpdx1_2592 Rhodopseudomonas palustris DX-1 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_004108912.1 2775990 D 652103 CDS YP_004108913.1 316933931 10064813 2777072..2777527 1 NC_014834.1 KEGG: nwi:Nwi_1849 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2777527 10064813 Rpdx1_2593 Rhodopseudomonas palustris DX-1 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_004108913.1 2777072 D 652103 CDS YP_004108914.1 316933932 10064814 2777536..2778378 1 NC_014834.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: nha:Nham_1705 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 2778378 10064814 Rpdx1_2594 Rhodopseudomonas palustris DX-1 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_004108914.1 2777536 D 652103 CDS YP_004108915.1 316933933 10064815 2778397..2779254 1 NC_014834.1 PFAM: protein of unknown function DUF1009; KEGG: nha:Nham_1706 hypothetical protein; hypothetical protein 2779254 10064815 Rpdx1_2595 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108915.1 2778397 D 652103 CDS YP_004108916.1 316933934 10064816 2779251..2780444 1 NC_014834.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: bja:bll4847 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase 2780444 10064816 Rpdx1_2596 Rhodopseudomonas palustris DX-1 lipid-A-disaccharide synthase YP_004108916.1 2779251 D 652103 CDS YP_004108917.1 316933935 10064817 complement(2780706..2782010) 1 NC_014834.1 KEGG: bra:BRADO4126 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 2782010 10064817 Rpdx1_2597 Rhodopseudomonas palustris DX-1 citrate synthase I YP_004108917.1 2780706 R 652103 CDS YP_004108918.1 316933936 10064818 complement(2782161..2783582) 1 NC_014834.1 KEGG: nwi:Nwi_1844 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 2783582 10064818 Rpdx1_2598 Rhodopseudomonas palustris DX-1 glutamyl-tRNA synthetase YP_004108918.1 2782161 R 652103 CDS YP_004108919.1 316933937 10064819 2783744..2785426 1 NC_014834.1 KEGG: bra:BRADO4124 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; glutaminyl-tRNA synthetase 2785426 10064819 Rpdx1_2599 Rhodopseudomonas palustris DX-1 glutaminyl-tRNA synthetase YP_004108919.1 2783744 D 652103 CDS YP_004108920.1 316933938 10064820 2785519..2787783 1 NC_014834.1 KEGG: bja:bll4830 hypothetical protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; ComEC/Rec2-like protein 2787783 10064820 Rpdx1_2600 Rhodopseudomonas palustris DX-1 ComEC/Rec2-like protein YP_004108920.1 2785519 D 652103 CDS YP_004108921.1 316933939 10064821 complement(2787852..2788562) 1 NC_014834.1 TIGRFAM: LexA repressor; KEGG: bra:BRADO4120 LexA repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; LexA DNA-binding domain protein; LexA family transcriptional repressor 2788562 10064821 Rpdx1_2601 Rhodopseudomonas palustris DX-1 LexA family transcriptional repressor YP_004108921.1 2787852 R 652103 CDS YP_004108922.1 316933940 10064822 complement(2788738..2789949) 1 NC_014834.1 KEGG: nha:Nham_1730 MoeA-likedomain-containing protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; molybdenum cofactor synthesis domain-containing protein 2789949 10064822 Rpdx1_2602 Rhodopseudomonas palustris DX-1 molybdenum cofactor synthesis domain-containing protein YP_004108922.1 2788738 R 652103 CDS YP_004108923.1 316933941 10064823 2790147..2790482 1 NC_014834.1 KEGG: cwo:Cwoe_0867 major facilitator superfamily MFS_1; hypothetical protein 2790482 10064823 Rpdx1_2603 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108923.1 2790147 D 652103 CDS YP_004108924.1 316933942 10064824 complement(2790497..2790988) 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: pfs:PFLU4203 putative thioesterase; thioesterase superfamily protein 2790988 10064824 Rpdx1_2604 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004108924.1 2790497 R 652103 CDS YP_004108925.1 316933943 10064825 complement(2791027..2791653) 1 NC_014834.1 KEGG: bra:BRADO4115 putative haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 2791653 10064825 Rpdx1_2605 Rhodopseudomonas palustris DX-1 HAD-superfamily hydrolase YP_004108925.1 2791027 R 652103 CDS YP_004108926.1 316933944 10064826 2791907..2792761 1 NC_014834.1 PFAM: OmpA/MotB domain protein; KEGG: bja:blr3801 chemotaxis protein; OmpA/MotB domain-containing protein 2792761 10064826 Rpdx1_2606 Rhodopseudomonas palustris DX-1 OmpA/MotB domain-containing protein YP_004108926.1 2791907 D 652103 CDS YP_004108927.1 316933945 10064827 complement(2792795..2793043) 1 NC_014834.1 PFAM: type IV pilus assembly PilZ; KEGG: bja:bsr0173 hypothetical protein; type IV pilus assembly PilZ 2793043 10064827 Rpdx1_2607 Rhodopseudomonas palustris DX-1 type IV pilus assembly PilZ YP_004108927.1 2792795 R 652103 CDS YP_004108928.1 316933946 10064828 complement(2793202..2793702) 1 NC_014834.1 PFAM: heat shock protein Hsp20; KEGG: pde:Pden_3146 heat shock protein HSP20; heat shock protein Hsp20 2793702 10064828 Rpdx1_2608 Rhodopseudomonas palustris DX-1 heat shock protein Hsp20 YP_004108928.1 2793202 R 652103 CDS YP_004108929.1 316933947 10064829 2793942..2794418 1 NC_014834.1 KEGG: nwi:Nwi_1114 hypothetical protein; hypothetical protein 2794418 10064829 Rpdx1_2609 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108929.1 2793942 D 652103 CDS YP_004108930.1 316933948 10064830 complement(2794545..2797103) 1 NC_014834.1 KEGG: bja:blr3815 putative cation-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; HAD superfamily P-type ATPase 2797103 10064830 Rpdx1_2610 Rhodopseudomonas palustris DX-1 HAD superfamily P-type ATPase YP_004108930.1 2794545 R 652103 CDS YP_004108931.1 316933949 10064831 complement(2797141..2797671) 1 NC_014834.1 KEGG: bja:blr4811 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; molybdenum cofactor biosynthesis protein C 2797671 10064831 Rpdx1_2611 Rhodopseudomonas palustris DX-1 molybdenum cofactor biosynthesis protein C YP_004108931.1 2797141 R 652103 CDS YP_004108932.1 316933950 10064832 complement(2797680..2798477) 1 NC_014834.1 KEGG: bra:BRADO4110 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 2798477 10064832 Rpdx1_2612 Rhodopseudomonas palustris DX-1 indole-3-glycerol-phosphate synthase YP_004108932.1 2797680 R 652103 CDS YP_004108933.1 316933951 10064834 complement(2798615..2799631) 1 NC_014834.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: nha:Nham_1734 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 2799631 10064834 Rpdx1_2614 Rhodopseudomonas palustris DX-1 anthranilate phosphoribosyltransferase YP_004108933.1 2798615 R 652103 CDS YP_004108934.1 316933952 10064835 complement(2799668..2801569) 1 NC_014834.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: bja:blr4808 peptidyl-prolyl cis-trans isomerse; PpiC-type peptidyl-prolyl cis-trans isomerase 2801569 10064835 Rpdx1_2615 Rhodopseudomonas palustris DX-1 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004108934.1 2799668 R 652103 CDS YP_004108935.1 316933953 10064836 2801825..2802601 1 NC_014834.1 TIGRFAM: triosephosphate isomerase; KEGG: bja:bll4807 triosephosphate isomerase; PFAM: triosephosphate isomerase; triosephosphate isomerase 2802601 10064836 Rpdx1_2616 Rhodopseudomonas palustris DX-1 triosephosphate isomerase YP_004108935.1 2801825 D 652103 CDS YP_004108936.1 316933954 10064837 2802776..2803183 1 NC_014834.1 KEGG: bbt:BBta_4477 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 2803183 10064837 Rpdx1_2617 Rhodopseudomonas palustris DX-1 preprotein translocase subunit SecG YP_004108936.1 2802776 D 652103 CDS YP_004108937.1 316933955 10064838 2803350..2804981 1 NC_014834.1 TIGRFAM: CTP synthase; KEGG: bja:bll4805 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; CTP synthase 2804981 10064838 Rpdx1_2618 Rhodopseudomonas palustris DX-1 CTP synthase YP_004108937.1 2803350 D 652103 CDS YP_004108938.1 316933956 10064839 complement(2804996..2805382) 1 NC_014834.1 PFAM: PAAR repeat-containing protein; KEGG: nwi:Nwi_1832 hypothetical protein; PAAR repeat-containing protein 2805382 10064839 Rpdx1_2619 Rhodopseudomonas palustris DX-1 PAAR repeat-containing protein YP_004108938.1 2804996 R 652103 CDS YP_004108939.1 316933957 10064840 2805514..2806371 1 NC_014834.1 KEGG: avi:Avi_9163 hypothetical protein; hypothetical protein 2806371 10064840 Rpdx1_2620 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108939.1 2805514 D 652103 CDS YP_004108940.1 316933958 10064841 complement(2806405..2806680) 1 NC_014834.1 KEGG: mex:Mext_0337 hypothetical protein; hypothetical protein 2806680 10064841 Rpdx1_2621 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108940.1 2806405 R 652103 CDS YP_004108941.1 316933959 10064842 complement(2806670..2806924) 1 NC_014834.1 PFAM: protein of unknown function DUF497; KEGG: swi:Swit_1213 hypothetical protein; hypothetical protein 2806924 10064842 Rpdx1_2622 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108941.1 2806670 R 652103 CDS YP_004108942.1 316933960 10064843 2807034..2807360 1 NC_014834.1 PFAM: NIPSNAP family containing protein; KEGG: bbt:BBta_4475 hypothetical protein; NIPSNAP family containing protein 2807360 10064843 Rpdx1_2623 Rhodopseudomonas palustris DX-1 NIPSNAP family containing protein YP_004108942.1 2807034 D 652103 CDS YP_004108943.1 316933961 10064844 2807473..2808339 1 NC_014834.1 KEGG: oca:OCAR_6297 hypothetical protein; hypothetical protein 2808339 10064844 Rpdx1_2624 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108943.1 2807473 D 652103 CDS YP_004108944.1 316933962 10064845 2808340..2809203 1 NC_014834.1 TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; KEGG: bra:BRADO4101 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; 2-dehydro-3-deoxyphosphooctonate aldolase 2809203 10064845 Rpdx1_2625 Rhodopseudomonas palustris DX-1 2-dehydro-3-deoxyphosphooctonate aldolase YP_004108944.1 2808340 D 652103 CDS YP_004108945.1 316933963 10064846 complement(2809256..2811409) 1 NC_014834.1 PFAM: glycosyl transferase family 2; KEGG: bra:BRADO1946 glucosyltransferase MdoH; glycosyl transferase family 2 protein 2811409 10064846 Rpdx1_2626 Rhodopseudomonas palustris DX-1 glycosyl transferase family 2 protein YP_004108945.1 2809256 R 652103 CDS YP_004108946.1 316933964 10064847 complement(2811397..2812908) 1 NC_014834.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: bja:bll8054 glucan biosynthesis protein G; periplasmic glucan biosynthesis protein MdoG 2812908 10064847 Rpdx1_2627 Rhodopseudomonas palustris DX-1 periplasmic glucan biosynthesis protein MdoG YP_004108946.1 2811397 R 652103 CDS YP_004108947.1 316933965 10064848 complement(2812995..2813471) 1 NC_014834.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: bbt:BBta_4472 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; 7-cyano-7-deazaguanine reductase 2813471 10064848 Rpdx1_2628 Rhodopseudomonas palustris DX-1 7-cyano-7-deazaguanine reductase YP_004108947.1 2812995 R 652103 CDS YP_004108948.1 316933966 10064849 2813657..2814940 1 NC_014834.1 TIGRFAM: enolase; KEGG: bbt:BBta_4471 phosphopyruvate hydratase; PFAM: Enolase-like; enolase 2814940 10064849 Rpdx1_2629 Rhodopseudomonas palustris DX-1 enolase YP_004108948.1 2813657 D 652103 CDS YP_004108949.1 316933967 10064850 2815051..2816187 1 NC_014834.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_4470 alcohol dehydrogenase-like protein; alcohol dehydrogenase GroES domain-containing protein 2816187 10064850 Rpdx1_2630 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase GroES domain-containing protein YP_004108949.1 2815051 D 652103 CDS YP_004108950.1 316933968 10064851 2816273..2817076 1 NC_014834.1 KEGG: lch:Lcho_0484 FkbM family methyltransferase; hypothetical protein 2817076 10064851 Rpdx1_2631 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108950.1 2816273 D 652103 CDS YP_004108951.1 316933969 10064852 complement(2817169..2817783) 1 NC_014834.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ote:Oter_2195 lysine exporter protein LysE/YggA; lysine exporter protein LysE/YggA 2817783 10064852 Rpdx1_2632 Rhodopseudomonas palustris DX-1 lysine exporter protein LysE/YggA YP_004108951.1 2817169 R 652103 CDS YP_004108952.1 316933970 10064853 2817876..2819018 1 NC_014834.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_3236 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 2819018 10064853 Rpdx1_2633 Rhodopseudomonas palustris DX-1 L-carnitine dehydratase/bile acid-inducible protein F YP_004108952.1 2817876 D 652103 CDS YP_004108953.1 316933971 10064854 2819183..2819743 1 NC_014834.1 PFAM: NADPH-dependent FMN reductase; KEGG: nha:Nham_1747 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2819743 10064854 Rpdx1_2634 Rhodopseudomonas palustris DX-1 NADPH-dependent FMN reductase YP_004108953.1 2819183 D 652103 CDS YP_004108954.1 316933972 10064855 2819832..2820149 1 NC_014834.1 PFAM: Septum formation initiator; KEGG: bja:bll4786 hypothetical protein; septum formation initiator 2820149 10064855 Rpdx1_2635 Rhodopseudomonas palustris DX-1 septum formation initiator YP_004108954.1 2819832 D 652103 CDS YP_004108955.1 316933973 10064856 2820302..2821336 1 NC_014834.1 KEGG: bra:BRADO4087 pyruvate dehydrogenase E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase E1 component subunit alpha 2821336 10064856 Rpdx1_2636 Rhodopseudomonas palustris DX-1 pyruvate dehydrogenase E1 component subunit alpha YP_004108955.1 2820302 D 652103 CDS YP_004108956.1 316933974 10064857 2821395..2822804 1 NC_014834.1 PFAM: Transketolase central region; biotin/lipoyl attachment domain-containing protein; Transketolase domain protein; KEGG: bra:BRADO4086 pyruvate dehydrogenase subunit beta; transketolase central region 2822804 10064857 Rpdx1_2637 Rhodopseudomonas palustris DX-1 transketolase central region YP_004108956.1 2821395 D 652103 CDS YP_004108957.1 316933975 10064858 2823177..2823473 1 NC_014834.1 KEGG: bbt:BBta_4461 hypothetical protein; hypothetical protein 2823473 10064858 Rpdx1_2638 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108957.1 2823177 D 652103 CDS YP_004108958.1 316933976 10064859 2823486..2824892 1 NC_014834.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; KEGG: nha:Nham_1751 branched-chain alpha-keto acid dehydrogenase subunit E2; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 2824892 10064859 Rpdx1_2639 Rhodopseudomonas palustris DX-1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_004108958.1 2823486 D 652103 CDS YP_004108959.1 316933977 10064860 2824972..2826393 1 NC_014834.1 KEGG: bja:bll4778 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; dihydrolipoamide dehydrogenase 2826393 10064860 Rpdx1_2640 Rhodopseudomonas palustris DX-1 dihydrolipoamide dehydrogenase YP_004108959.1 2824972 D 652103 CDS YP_004108960.1 316933978 10064861 2827023..2827844 1 NC_014834.1 KEGG: nha:Nham_1754 Sel1-like; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 2827844 10064861 Rpdx1_2641 Rhodopseudomonas palustris DX-1 Sel1 domain-containing protein repeat-containing protein YP_004108960.1 2827023 D 652103 CDS YP_004108961.1 316933979 10064862 complement(2827995..2828786) 1 NC_014834.1 KEGG: bja:blr4761 exonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 2828786 10064862 Rpdx1_2642 Rhodopseudomonas palustris DX-1 exodeoxyribonuclease III Xth YP_004108961.1 2827995 R 652103 CDS YP_004108962.1 316933980 10064863 2828950..2829306 1 NC_014834.1 KEGG: met:M446_3173 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2829306 10064863 Rpdx1_2643 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004108962.1 2828950 D 652103 CDS YP_004108963.1 316933981 10064864 2829470..2830441 1 NC_014834.1 KEGG: pst:PSPTO_2262 hypothetical protein; hypothetical protein 2830441 10064864 Rpdx1_2644 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108963.1 2829470 D 652103 CDS YP_004108964.1 316933982 10064865 2830595..2831350 1 NC_014834.1 KEGG: pst:PSPTO_2262 hypothetical protein; hypothetical protein 2831350 10064865 Rpdx1_2645 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108964.1 2830595 D 652103 CDS YP_004108965.1 316933983 10064866 complement(2831379..2832440) 1 NC_014834.1 PFAM: neurotransmitter-gated ion-channel ligand-binding; KEGG: fph:Fphi_0374 hypothetical protein; neurotransmitter-gated ion-channel ligand-binding protein 2832440 10064866 Rpdx1_2646 Rhodopseudomonas palustris DX-1 neurotransmitter-gated ion-channel ligand-binding protein YP_004108965.1 2831379 R 652103 CDS YP_004108966.1 316933984 10064867 complement(2832437..2833450) 1 NC_014834.1 KEGG: bja:blr7173 putative methyl accepting chemotaxis protein; putative methyl accepting chemotaxis protein 2833450 10064867 Rpdx1_2647 Rhodopseudomonas palustris DX-1 putative methyl accepting chemotaxis protein YP_004108966.1 2832437 R 652103 CDS YP_004108967.1 316933985 10064868 complement(2833681..2834013) 1 NC_014834.1 KEGG: nha:Nham_1756 HesB/YadR/YfhF; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein 2834013 10064868 Rpdx1_2648 Rhodopseudomonas palustris DX-1 iron-sulfur cluster assembly accessory protein YP_004108967.1 2833681 R 652103 CDS YP_004108968.1 316933986 10064869 2834133..2835335 1 NC_014834.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: bja:bll4758 deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; deoxyguanosinetriphosphate triphosphohydrolase 2835335 10064869 Rpdx1_2649 Rhodopseudomonas palustris DX-1 deoxyguanosinetriphosphate triphosphohydrolase YP_004108968.1 2834133 D 652103 CDS YP_004108969.1 316933987 10064870 2835402..2837180 1 NC_014834.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: nha:Nham_1758 arginyl-tRNA synthetase; arginyl-tRNa synthetase 2837180 10064870 Rpdx1_2650 Rhodopseudomonas palustris DX-1 arginyl-tRNa synthetase YP_004108969.1 2835402 D 652103 CDS YP_004108970.1 316933988 10064871 2837283..2838917 1 NC_014834.1 PFAM: Sporulation domain protein; KEGG: bja:bll4755 hypothetical protein; sporulation domain-containing protein 2838917 10064871 Rpdx1_2651 Rhodopseudomonas palustris DX-1 sporulation domain-containing protein YP_004108970.1 2837283 D 652103 CDS YP_004108971.1 316933989 10064872 2838965..2839990 1 NC_014834.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: bja:bll4754 glycosyl hydrolase; glycoside hydrolase family protein 2839990 10064872 Rpdx1_2652 Rhodopseudomonas palustris DX-1 glycoside hydrolase family protein YP_004108971.1 2838965 D 652103 CDS YP_004108972.1 316933990 10064873 2839987..2840817 1 NC_014834.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: nwi:Nwi_1804 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 2840817 10064873 Rpdx1_2653 Rhodopseudomonas palustris DX-1 chromosome segregation and condensation protein ScpA YP_004108972.1 2839987 D 652103 CDS YP_004108973.1 316933991 10064874 2840838..2842121 1 NC_014834.1 KEGG: bbt:BBta_4418 condensin subunit ScpB; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; chromosome segregation and condensation protein ScpB 2842121 10064874 Rpdx1_2654 Rhodopseudomonas palustris DX-1 chromosome segregation and condensation protein ScpB YP_004108973.1 2840838 D 652103 CDS YP_004108974.1 316933992 10064875 2842272..2842508 1 NC_014834.1 KEGG: bbt:BBta_4417 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein subunit TatA/E 2842508 10064875 Rpdx1_2655 Rhodopseudomonas palustris DX-1 twin-arginine translocation protein subunit TatA/E YP_004108974.1 2842272 D 652103 CDS YP_004108975.1 316933993 10064876 2842692..2843258 1 NC_014834.1 manually curated; TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: bja:bll4750 putative sec-independent protein translocase protein; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein subunit TatB 2843258 10064876 Rpdx1_2656 Rhodopseudomonas palustris DX-1 twin-arginine translocation protein subunit TatB YP_004108975.1 2842692 D 652103 CDS YP_004108976.1 316933994 10064877 2843255..2844064 1 NC_014834.1 KEGG: bja:bll4749 sec-independent protein translocase protein; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC 2844064 10064877 Rpdx1_2657 Rhodopseudomonas palustris DX-1 Sec-independent protein translocase subunit TatC YP_004108976.1 2843255 D 652103 CDS YP_004108977.1 316933995 10064878 2844208..2847270 1 NC_014834.1 KEGG: mrd:Mrad2831_1933 outer membrane autotransporter; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; outer membrane autotransporter barrel domain-containing protein 2847270 10064878 Rpdx1_2658 Rhodopseudomonas palustris DX-1 outer membrane autotransporter barrel domain-containing protein YP_004108977.1 2844208 D 652103 CDS YP_004108978.1 316933996 10064879 2847381..2848871 1 NC_014834.1 TIGRFAM: seryl-tRNA synthetase; KEGG: nha:Nham_1791 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase 2848871 10064879 Rpdx1_2659 Rhodopseudomonas palustris DX-1 seryl-tRNA synthetase YP_004108978.1 2847381 D 652103 CDS YP_004108979.1 316933997 10064880 2848969..2850564 1 NC_014834.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mpt:Mpe_A0536 putative cytidine deaminase; zinc-binding CMP/dCMP deaminase protein 2850564 10064880 Rpdx1_2660 Rhodopseudomonas palustris DX-1 zinc-binding CMP/dCMP deaminase protein YP_004108979.1 2848969 D 652103 CDS YP_004108980.1 316933998 10064881 2850789..2851370 1 NC_014834.1 PFAM: SCP-like extracellular; KEGG: bbt:BBta_6058 hypothetical protein; hypothetical protein 2851370 10064881 Rpdx1_2661 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108980.1 2850789 D 652103 CDS YP_004108981.1 316933999 10064882 2851467..2852234 1 NC_014834.1 KEGG: bbt:BBta_4412 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 2852234 10064882 Rpdx1_2662 Rhodopseudomonas palustris DX-1 stationary-phase survival protein SurE YP_004108981.1 2851467 D 652103 CDS YP_004108982.1 316934000 10064883 complement(2852293..2852667) 1 NC_014834.1 KEGG: bbt:BBta_4411 putative response regulator receiver (CheY-like protein); PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver 2852667 10064883 Rpdx1_2663 Rhodopseudomonas palustris DX-1 response regulator receiver YP_004108982.1 2852293 R 652103 CDS YP_004108983.1 316934001 10064884 2852894..2853547 1 NC_014834.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: bja:bll474 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 2853547 10064884 Rpdx1_2664 Rhodopseudomonas palustris DX-1 protein-L-isoaspartate O-methyltransferase YP_004108983.1 2852894 D 652103 CDS YP_004108984.1 316934002 10064885 2853668..2855107 1 NC_014834.1 KEGG: nha:Nham_1795 peptidase M23B; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidase M23 2855107 10064885 Rpdx1_2665 Rhodopseudomonas palustris DX-1 peptidase M23 YP_004108984.1 2853668 D 652103 CDS YP_004108985.1 316934003 10064886 complement(2855435..2857171) 1 NC_014834.1 PFAM: porin; KEGG: oca:OCAR_5916 hypothetical protein; porin 2857171 10064886 Rpdx1_2666 Rhodopseudomonas palustris DX-1 porin YP_004108985.1 2855435 R 652103 CDS YP_004108986.1 316934004 10064887 complement(2857321..2858310) 1 NC_014834.1 PFAM: protein of unknown function DUF815; KEGG: bra:BRADO4038 putative ATPase family protein; hypothetical protein 2858310 10064887 Rpdx1_2667 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108986.1 2857321 R 652103 CDS YP_004108987.1 316934005 10064888 2858501..2858938 1 NC_014834.1 KEGG: bra:BRADO4036 preprotein translocase (YajC); TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC 2858938 10064888 Rpdx1_2668 Rhodopseudomonas palustris DX-1 preprotein translocase subunit YajC YP_004108987.1 2858501 D 652103 CDS YP_004108988.1 316934006 10064889 2858983..2860584 1 NC_014834.1 KEGG: nha:Nham_1799 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD 2860584 10064889 Rpdx1_2669 Rhodopseudomonas palustris DX-1 protein-export membrane protein SecD YP_004108988.1 2858983 D 652103 CDS YP_004108989.1 316934007 10064890 2860610..2861755 1 NC_014834.1 KEGG: nha:Nham_1800 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF 2861755 10064890 Rpdx1_2670 Rhodopseudomonas palustris DX-1 protein-export membrane protein SecF YP_004108989.1 2860610 D 652103 CDS YP_004108990.1 316934008 10064891 2861903..2862286 1 NC_014834.1 PFAM: protein of unknown function DUF498; KEGG: bbt:BBta_4404 hypothetical protein; hypothetical protein 2862286 10064891 Rpdx1_2671 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108990.1 2861903 D 652103 CDS YP_004108991.1 316934009 10064892 2862283..2863155 1 NC_014834.1 PFAM: Squalene/phytoene synthase; KEGG: bra:BRADO4032 putative phytoene synthase (terpenoid synthase); squalene/phytoene synthase 2863155 10064892 Rpdx1_2672 Rhodopseudomonas palustris DX-1 squalene/phytoene synthase YP_004108991.1 2862283 D 652103 CDS YP_004108992.1 316934010 10064893 complement(2863287..2864723) 1 NC_014834.1 TIGRFAM: gid protein; KEGG: nha:Nham_1804 tRNA (uracil-5-)-methyltransferase Gid; PFAM: glucose-inhibited division protein A; hypothetical protein 2864723 10064893 Rpdx1_2673 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108992.1 2863287 R 652103 CDS YP_004108993.1 316934011 10064894 complement(2864881..2865033) 1 NC_014834.1 KEGG: bja:bsr4726 hypothetical protein; hypothetical protein 2865033 10064894 Rpdx1_2674 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108993.1 2864881 R 652103 CDS YP_004108994.1 316934012 10064895 complement(2865533..2866429) 1 NC_014834.1 PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: bja:blr4723 hypothetical protein; hypothetical protein 2866429 10064895 Rpdx1_2675 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108994.1 2865533 R 652103 CDS YP_004108995.1 316934013 10064896 2866793..2867197 1 NC_014834.1 KEGG: bbt:BBta_4393 hypothetical protein; hypothetical protein 2867197 10064896 Rpdx1_2676 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108995.1 2866793 D 652103 CDS YP_004108996.1 316934014 10064897 complement(2867268..2867675) 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: pla:Plav_2975 thioesterase superfamily protein; thioesterase superfamily protein 2867675 10064897 Rpdx1_2677 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004108996.1 2867268 R 652103 CDS YP_004108997.1 316934015 10064898 complement(2867807..2868097) 1 NC_014834.1 KEGG: bja:bsr4721 hypothetical protein; hypothetical protein 2868097 10064898 Rpdx1_2678 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108997.1 2867807 R 652103 CDS YP_004108998.1 316934016 10064899 complement(2868385..2868906) 1 NC_014834.1 KEGG: bja:blr4716 hypothetical protein; hypothetical protein 2868906 10064899 Rpdx1_2679 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004108998.1 2868385 R 652103 CDS YP_004108999.1 316934017 10064900 complement(2868945..2869721) 1 NC_014834.1 PFAM: Ion transport 2 domain protein; KEGG: mch:Mchl_1249 ion transport 2 domain protein; Ion transport 2 domain-containing protein 2869721 10064900 Rpdx1_2680 Rhodopseudomonas palustris DX-1 Ion transport 2 domain-containing protein YP_004108999.1 2868945 R 652103 CDS YP_004109000.1 316934018 10064901 2869757..2870095 1 NC_014834.1 PFAM: protein of unknown function DUF433; KEGG: rmr:Rmar_0293 protein of unknown function DUF433; hypothetical protein 2870095 10064901 Rpdx1_2681 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109000.1 2869757 D 652103 CDS YP_004109001.1 316934019 10064902 2870098..2870460 1 NC_014834.1 KEGG: app:CAP2UW1_4416 hypothetical protein; hypothetical protein 2870460 10064902 Rpdx1_2682 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109001.1 2870098 D 652103 CDS YP_004109002.1 316934020 10064903 complement(2870479..2870853) 1 NC_014834.1 KEGG: bja:bll5899 hypothetical protein; hypothetical protein 2870853 10064903 Rpdx1_2683 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109002.1 2870479 R 652103 CDS YP_004109003.1 316934021 10064904 2871050..2871277 1 NC_014834.1 PFAM: protein of unknown function DUF433; KEGG: bja:bsl4703 hypothetical protein; hypothetical protein 2871277 10064904 Rpdx1_2684 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109003.1 2871050 D 652103 CDS YP_004109004.1 316934022 10064905 2871289..2871618 1 NC_014834.1 KEGG: slt:Slit_0676 hypothetical protein; hypothetical protein 2871618 10064905 Rpdx1_2685 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109004.1 2871289 D 652103 CDS YP_004109005.1 316934023 10064906 complement(2871619..2871828) 1 NC_014834.1 KEGG: nhl:Nhal_3480 hypothetical protein; hypothetical protein 2871828 10064906 Rpdx1_2686 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109005.1 2871619 R 652103 CDS YP_004109006.1 316934024 10064907 complement(2871930..2872568) 1 NC_014834.1 KEGG: conserved domain-containing protein; hypothetical protein 2872568 10064907 Rpdx1_2687 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109006.1 2871930 R 652103 CDS YP_004109007.1 316934025 10064908 complement(2872584..2875673) 1 NC_014834.1 KEGG: bbt:BBta_4379 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A 2875673 10064908 Rpdx1_2688 Rhodopseudomonas palustris DX-1 excinuclease ABC subunit A YP_004109007.1 2872584 R 652103 CDS YP_004109008.1 316934026 10064909 complement(2875914..2876654) 1 NC_014834.1 KEGG: nha:Nham_2080 putative outer-membrane protein precursor; hypothetical protein 2876654 10064909 Rpdx1_2689 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109008.1 2875914 R 652103 CDS YP_004109009.1 316934027 10064910 2877182..2877685 1 NC_014834.1 KEGG: nha:Nham_2079 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; ssDNA-binding protein 2877685 10064910 Rpdx1_2690 Rhodopseudomonas palustris DX-1 ssDNA-binding protein YP_004109009.1 2877182 D 652103 CDS YP_004109010.1 316934028 10064911 complement(2877818..2878180) 1 NC_014834.1 KEGG: rbi:RB2501_12067 hypothetical protein; hypothetical protein 2878180 10064911 Rpdx1_2691 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109010.1 2877818 R 652103 CDS YP_004109011.1 316934029 10064912 complement(2878177..2879472) 1 NC_014834.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: bbt:BBta_7487 hypothetical protein; hypothetical protein 2879472 10064912 Rpdx1_2692 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109011.1 2878177 R 652103 CDS YP_004109012.1 316934030 10064913 complement(2879551..2880375) 1 NC_014834.1 KEGG: nha:Nham_1845 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; MazG family protein 2880375 10064913 Rpdx1_2693 Rhodopseudomonas palustris DX-1 MazG family protein YP_004109012.1 2879551 R 652103 CDS YP_004109013.1 316934031 10064914 2880492..2881205 1 NC_014834.1 KEGG: bja:blr4495 hypothetical protein; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; ExsB protein 2881205 10064914 Rpdx1_2694 Rhodopseudomonas palustris DX-1 ExsB protein YP_004109013.1 2880492 D 652103 CDS YP_004109014.1 316934032 10064915 2881300..2882619 1 NC_014834.1 PFAM: beta-lactamase; KEGG: bja:blr5541 hypothetical protein; beta-lactamase 2882619 10064915 Rpdx1_2695 Rhodopseudomonas palustris DX-1 beta-lactamase YP_004109014.1 2881300 D 652103 CDS YP_004109015.1 316934033 10064916 complement(2882568..2883704) 1 NC_014834.1 KEGG: mlo:mll2082 hypothetical protein; hypothetical protein 2883704 10064916 Rpdx1_2696 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109015.1 2882568 R 652103 CDS YP_004109016.1 316934034 10064917 complement(2883860..2884249) 1 NC_014834.1 KEGG: bja:bll4496 hypothetical protein; hypothetical protein 2884249 10064917 Rpdx1_2697 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109016.1 2883860 R 652103 CDS YP_004109017.1 316934035 10064918 complement(2884246..2884905) 1 NC_014834.1 KEGG: bbt:BBta_4084 nitrile hydratase subunit beta (nitrilase) (NHase); nitrile hydratase 2884905 10064918 Rpdx1_2698 Rhodopseudomonas palustris DX-1 nitrile hydratase YP_004109017.1 2884246 R 652103 CDS YP_004109018.1 316934036 10064919 complement(2884902..2885534) 1 NC_014834.1 TIGRFAM: nitrile hydratase, alpha subunit; KEGG: bbt:BBta_4085 nitrile hydratase subunit alpha (nitrilase) (NHase); PFAM: Nitrile hydratase alpha chain; nitrile hydratase subunit alpha 2885534 10064919 Rpdx1_2699 Rhodopseudomonas palustris DX-1 nitrile hydratase subunit alpha YP_004109018.1 2884902 R 652103 CDS YP_004109019.1 316934037 10064920 2885627..2886433 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pla:Plav_1123 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2886433 10064920 Rpdx1_2700 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004109019.1 2885627 D 652103 CDS YP_004109020.1 316934038 10064921 2886489..2886812 1 NC_014834.1 PFAM: Putative mono-oxygenase ydhR; KEGG: gvi:gll2745 hypothetical protein; Putative mono-oxygenase ydhR 2886812 10064921 Rpdx1_2701 Rhodopseudomonas palustris DX-1 Putative mono-oxygenase ydhR YP_004109020.1 2886489 D 652103 CDS YP_004109021.1 316934039 10064922 complement(2886819..2888882) 1 NC_014834.1 PFAM: UvrD/REP helicase; KEGG: nha:Nham_3768 UvrD/REP helicase; UvrD/REP helicase 2888882 10064922 Rpdx1_2702 Rhodopseudomonas palustris DX-1 UvrD/REP helicase YP_004109021.1 2886819 R 652103 CDS YP_004109022.1 316934040 10064923 2889134..2889631 1 NC_014834.1 PFAM: Collagen triple helix repeat; KEGG: mno:Mnod_4914 collagen triple helix repeat protein; collagen triple helix repeat 2889631 10064923 Rpdx1_2703 Rhodopseudomonas palustris DX-1 collagen triple helix repeat YP_004109022.1 2889134 D 652103 CDS YP_004109023.1 316934041 10064924 2889904..2890683 1 NC_014834.1 KEGG: sus:Acid_7087 beta-lactamase; hypothetical protein 2890683 10064924 Rpdx1_2704 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109023.1 2889904 D 652103 CDS YP_004109024.1 316934042 10064925 complement(2890736..2891602) 1 NC_014834.1 TIGRFAM: pyridoxal kinase; KEGG: rru:Rru_A1145 pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; pyridoxal kinase 2891602 10064925 Rpdx1_2705 Rhodopseudomonas palustris DX-1 pyridoxal kinase YP_004109024.1 2890736 R 652103 CDS YP_004109025.1 316934043 10064926 complement(2891599..2892831) 1 NC_014834.1 KEGG: rru:Rru_A1144 benzoate membrane transport protein; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; benzoate transporter 2892831 10064926 Rpdx1_2706 Rhodopseudomonas palustris DX-1 benzoate transporter YP_004109025.1 2891599 R 652103 CDS YP_004109026.1 316934044 10064927 2892939..2894429 1 NC_014834.1 KEGG: rru:Rru_A1143 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2894429 10064927 Rpdx1_2707 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004109026.1 2892939 D 652103 CDS YP_004109027.1 316934045 10064928 2894575..2895879 1 NC_014834.1 KEGG: rru:Rru_A1142 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 2895879 10064928 Rpdx1_2708 Rhodopseudomonas palustris DX-1 glycine hydroxymethyltransferase YP_004109027.1 2894575 D 652103 CDS YP_004109028.1 316934046 10064929 2895900..2896679 1 NC_014834.1 PFAM: alanine racemase domain protein; KEGG: rru:Rru_A1141 hypothetical protein; alanine racemase domain-containing protein 2896679 10064929 Rpdx1_2709 Rhodopseudomonas palustris DX-1 alanine racemase domain-containing protein YP_004109028.1 2895900 D 652103 CDS YP_004109029.1 316934047 10064930 complement(2896697..2897074) 1 NC_014834.1 KEGG: rhi:NGR_c29730 pH adaptation potassium efflux system protein G; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 2897074 10064930 Rpdx1_2710 Rhodopseudomonas palustris DX-1 monovalent cation/proton antiporter subunit MnhG/PhaG YP_004109029.1 2896697 R 652103 CDS YP_004109030.1 316934048 10064931 complement(2897071..2897352) 1 NC_014834.1 PFAM: multiple resistance and pH regulation protein F; KEGG: atc:AGR_C_896 multicomponent K+:H+ antiporter subunit F; multiple resistance and pH regulation protein F 2897352 10064931 Rpdx1_2711 Rhodopseudomonas palustris DX-1 multiple resistance and pH regulation protein F YP_004109030.1 2897071 R 652103 CDS YP_004109031.1 316934049 10064932 complement(2897349..2897837) 1 NC_014834.1 PFAM: cation antiporter; KEGG: nha:Nham_1007 putative monovalent cation/H+ antiporter subunit E; cation antiporter 2897837 10064932 Rpdx1_2712 Rhodopseudomonas palustris DX-1 cation antiporter YP_004109031.1 2897349 R 652103 CDS YP_004109032.1 316934050 10064933 complement(2897834..2899468) 1 NC_014834.1 KEGG: nha:Nham_1008 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase (quinone) 2899468 10064933 Rpdx1_2713 Rhodopseudomonas palustris DX-1 NADH dehydrogenase (quinone) YP_004109032.1 2897834 R 652103 CDS YP_004109033.1 316934051 10064934 complement(2899465..2899806) 1 NC_014834.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: oca:OCAR_5198 putative monovalent cation/H+ antiporter subunit C; NADH-ubiquinone oxidoreductase subunit 4L 2899806 10064934 Rpdx1_2714 Rhodopseudomonas palustris DX-1 NADH-ubiquinone oxidoreductase subunit 4L YP_004109033.1 2899465 R 652103 CDS YP_004109034.1 316934052 10064935 complement(2899797..2902724) 1 NC_014834.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; Na+/H+ antiporter MnhB subunit-related protein; KEGG: nha:Nham_1010 putative monovalent cation/H+ antiporter subunit A; NADH/ubiquinone/plastoquinone 2902724 10064935 Rpdx1_2715 Rhodopseudomonas palustris DX-1 NADH/ubiquinone/plastoquinone YP_004109034.1 2899797 R 652103 CDS YP_004109035.1 316934053 10064936 complement(2902953..2906405) 1 NC_014834.1 KEGG: nha:Nham_2830 hypothetical protein; hypothetical protein 2906405 10064936 Rpdx1_2716 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109035.1 2902953 R 652103 CDS YP_004109036.1 316934054 10064937 complement(2906402..2907625) 1 NC_014834.1 PFAM: metallophosphoesterase; KEGG: nha:Nham_2831 metallophosphoesterase; metallophosphoesterase 2907625 10064937 Rpdx1_2717 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004109036.1 2906402 R 652103 CDS YP_004109037.1 316934055 10064939 complement(2908708..2909304) 1 NC_014834.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ajs:Ajs_3697 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 2909304 10064939 Rpdx1_2719 Rhodopseudomonas palustris DX-1 NAD(P)H dehydrogenase (quinone) YP_004109037.1 2908708 R 652103 CDS YP_004109038.1 316934056 10064940 2909948..2910967 1 NC_014834.1 KEGG: bja:blr4511 ABC transporter substrate-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; TRAP dicarboxylate transporter subunit DctP 2910967 10064940 Rpdx1_2720 Rhodopseudomonas palustris DX-1 TRAP dicarboxylate transporter subunit DctP YP_004109038.1 2909948 D 652103 CDS YP_004109039.1 316934057 10064941 2910980..2912863 1 NC_014834.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bbt:BBta_4095 TRAP-type C4-dicarboxylate transporter small and large permease; TRAP C4-dicarboxylate transporter permease DctM 2912863 10064941 Rpdx1_2721 Rhodopseudomonas palustris DX-1 TRAP C4-dicarboxylate transporter permease DctM YP_004109039.1 2910980 D 652103 CDS YP_004109040.1 316934058 10064942 2912918..2914567 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_4096 acyl-CoA synthetase; AMP-dependent synthetase and ligase 2914567 10064942 Rpdx1_2722 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004109040.1 2912918 D 652103 CDS YP_004109041.1 316934059 10064943 complement(2914744..2915547) 1 NC_014834.1 KEGG: nha:Nham_2006 hypothetical protein; hypothetical protein 2915547 10064943 Rpdx1_2723 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109041.1 2914744 R 652103 CDS YP_004109042.1 316934060 10064944 complement(2915573..2916367) 1 NC_014834.1 KEGG: nwi:Nwi_1461 TatD-related deoxyribonuclease; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; hydrolase 2916367 10064944 Rpdx1_2724 Rhodopseudomonas palustris DX-1 hydrolase YP_004109042.1 2915573 R 652103 CDS YP_004109043.1 316934061 10064945 complement(2916367..2917911) 1 NC_014834.1 KEGG: bja:bll4516 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); methionyl-tRNA synthetase 2917911 10064945 Rpdx1_2725 Rhodopseudomonas palustris DX-1 methionyl-tRNA synthetase YP_004109043.1 2916367 R 652103 CDS YP_004109044.1 316934062 10064946 complement(2917992..2919047) 1 NC_014834.1 KEGG: bbt:BBta_4101 DNA polymerase III subunit delta'; DNA polymerase III subunit delta' 2919047 10064946 Rpdx1_2726 Rhodopseudomonas palustris DX-1 DNA polymerase III subunit delta' YP_004109044.1 2917992 R 652103 CDS YP_004109045.1 316934063 10064947 complement(2919044..2919736) 1 NC_014834.1 TIGRFAM: thymidylate kinase; KEGG: bja:bll4518 thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase 2919736 10064947 Rpdx1_2727 Rhodopseudomonas palustris DX-1 thymidylate kinase YP_004109045.1 2919044 R 652103 CDS YP_004109046.1 316934064 10064948 complement(2919739..2920980) 1 NC_014834.1 KEGG: bbt:BBta_4103 putative serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase 2920980 10064948 Rpdx1_2728 Rhodopseudomonas palustris DX-1 serine-type D-Ala-D-Ala carboxypeptidase YP_004109046.1 2919739 R 652103 CDS YP_004109047.1 316934065 10064949 2921127..2922074 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:blr4520 epoxide hydrolase; alpha/beta hydrolase fold protein 2922074 10064949 Rpdx1_2729 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004109047.1 2921127 D 652103 CDS YP_004109048.1 316934066 10064950 complement(2922119..2923042) 1 NC_014834.1 KEGG: nha:Nham_2012 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; rare lipoprotein A 2923042 10064950 Rpdx1_2730 Rhodopseudomonas palustris DX-1 rare lipoprotein A YP_004109048.1 2922119 R 652103 CDS YP_004109049.1 316934067 10064951 2923326..2924474 1 NC_014834.1 PFAM: protein of unknown function UPF0118; KEGG: bbt:BBta_4585 putative transport protein/permease; hypothetical protein 2924474 10064951 Rpdx1_2731 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109049.1 2923326 D 652103 CDS YP_004109050.1 316934068 10064952 complement(2924458..2924760) 1 NC_014834.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bbt:BBta_4588 hypothetical protein; antibiotic biosynthesis monooxygenase 2924760 10064952 Rpdx1_2732 Rhodopseudomonas palustris DX-1 antibiotic biosynthesis monooxygenase YP_004109050.1 2924458 R 652103 CDS YP_004109051.1 316934069 10064953 complement(2924837..2926072) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:bll4961 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase 2926072 10064953 Rpdx1_2733 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004109051.1 2924837 R 652103 CDS YP_004109052.1 316934070 10064954 complement(2926366..2927736) 1 NC_014834.1 KEGG: rle:RL2002 putative transposase-related protein; manually curated; PFAM: transposase IS4 family protein; transposase IS4 family protein 2927736 10064954 Rpdx1_2734 Rhodopseudomonas palustris DX-1 transposase IS4 family protein YP_004109052.1 2926366 R 652103 CDS YP_004109053.1 316934071 10064955 complement(2927840..2928322) 1 NC_014834.1 PFAM: ribosomal protein S9; KEGG: bbt:BBta_4591 30S ribosomal protein S9; 30S ribosomal protein S9 2928322 10064955 Rpdx1_2735 Rhodopseudomonas palustris DX-1 30S ribosomal protein S9 YP_004109053.1 2927840 R 652103 CDS YP_004109054.1 316934072 10064956 complement(2928324..2928788) 1 NC_014834.1 KEGG: nha:Nham_2455 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; 50S ribosomal protein L13 2928788 10064956 Rpdx1_2736 Rhodopseudomonas palustris DX-1 50S ribosomal protein L13 YP_004109054.1 2928324 R 652103 CDS YP_004109055.1 316934073 10064957 complement(2928944..2929372) 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bja:bll4964 hypothetical protein; thioesterase superfamily protein 2929372 10064957 Rpdx1_2737 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004109055.1 2928944 R 652103 CDS YP_004109056.1 316934074 10064958 2929463..2930290 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr4965 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 2930290 10064958 Rpdx1_2738 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004109056.1 2929463 D 652103 CDS YP_004109057.1 316934075 10064959 2930425..2931009 1 NC_014834.1 KEGG: bja:blr4966 hypothetical protein; hypothetical protein 2931009 10064959 Rpdx1_2739 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109057.1 2930425 D 652103 CDS YP_004109058.1 316934076 10064960 2931103..2932383 1 NC_014834.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bja:blr4967 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 2932383 10064960 Rpdx1_2740 Rhodopseudomonas palustris DX-1 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_004109058.1 2931103 D 652103 CDS YP_004109059.1 316934077 10064961 2932423..2932998 1 NC_014834.1 PFAM: protein of unknown function DUF1211; KEGG: bra:BRADO3012 hypothetical protein; hypothetical protein 2932998 10064961 Rpdx1_2741 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109059.1 2932423 D 652103 CDS YP_004109060.1 316934078 10064963 complement(2933332..2934411) 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pzu:PHZ_c1556 threonine dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 2934411 10064963 Rpdx1_2743 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004109060.1 2933332 R 652103 CDS YP_004109061.1 316934079 10064964 complement(2934408..2935205) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hne:HNE_0924 short chain dehydrogenase/reductase family oxidoreductase; short-chain dehydrogenase/reductase SDR 2935205 10064964 Rpdx1_2744 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004109061.1 2934408 R 652103 CDS YP_004109062.1 316934080 10064965 2935289..2937028 1 NC_014834.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: mjl:Mjls_2332 thiamine pyrophosphate binding domain-containing protein; thiamine pyrophosphate domain-containing TPP-binding protein 2937028 10064965 Rpdx1_2745 Rhodopseudomonas palustris DX-1 thiamine pyrophosphate domain-containing TPP-binding protein YP_004109062.1 2935289 D 652103 CDS YP_004109063.1 316934081 10064966 2937030..2937707 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: cyn:Cyan7425_2726 transcriptional regulator, TetR family; regulatory protein TetR 2937707 10064966 Rpdx1_2746 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004109063.1 2937030 D 652103 CDS YP_004109064.1 316934082 10064967 complement(2937721..2938833) 1 NC_014834.1 PFAM: cytochrome oxidase assembly; KEGG: bja:bll4968 cytochrome oxidase assembly factor; cytochrome oxidase assembly 2938833 10064967 Rpdx1_2747 Rhodopseudomonas palustris DX-1 cytochrome oxidase assembly YP_004109064.1 2937721 R 652103 CDS YP_004109065.1 316934083 10064968 2938930..2939142 1 NC_014834.1 KEGG: bra:BRADO4226 hypothetical protein; hypothetical protein 2939142 10064968 Rpdx1_2748 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109065.1 2938930 D 652103 CDS YP_004109066.1 316934084 10064969 complement(2939221..2940108) 1 NC_014834.1 KEGG: bra:BRADO1425 putative signal peptide; hypothetical protein 2940108 10064969 Rpdx1_2749 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109066.1 2939221 R 652103 CDS YP_004109067.1 316934085 10064970 2940503..2940985 1 NC_014834.1 PFAM: Ferritin Dps family protein; KEGG: eba:ebA1978 DNA-binding ferritin-like protein (oxidative damage protectant); ferritin Dps family protein 2940985 10064970 Rpdx1_2750 Rhodopseudomonas palustris DX-1 ferritin Dps family protein YP_004109067.1 2940503 D 652103 CDS YP_004109068.1 316934086 10064971 2941275..2942276 1 NC_014834.1 KEGG: mag:amb2822 cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 2942276 10064971 Rpdx1_2751 Rhodopseudomonas palustris DX-1 cytochrome-c peroxidase YP_004109068.1 2941275 D 652103 CDS YP_004109069.1 316934087 10064972 2942362..2943507 1 NC_014834.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: rru:Rru_A1283 membrane-bound tetrahaem cytochrome TorC/YecK; NapC/NirT cytochrome c domain-containing protein 2943507 10064972 Rpdx1_2752 Rhodopseudomonas palustris DX-1 NapC/NirT cytochrome c domain-containing protein YP_004109069.1 2942362 D 652103 CDS YP_004109070.1 316934088 10064973 complement(2943522..2944565) 1 NC_014834.1 PFAM: polysaccharide deacetylase; KEGG: bra:BRADO4227 putative polysaccharide deacetylase; polysaccharide deacetylase 2944565 10064973 Rpdx1_2753 Rhodopseudomonas palustris DX-1 polysaccharide deacetylase YP_004109070.1 2943522 R 652103 CDS YP_004109071.1 316934089 10064974 2944693..2945886 1 NC_014834.1 KEGG: bbt:BBta_4604 hypothetical protein; hypothetical protein 2945886 10064974 Rpdx1_2754 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109071.1 2944693 D 652103 CDS YP_004109072.1 316934090 10064975 complement(2945966..2948329) 1 NC_014834.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bbt:BBta_4605 polysaccharide biosynthesis transporter; lipopolysaccharide biosynthesis protein 2948329 10064975 Rpdx1_2755 Rhodopseudomonas palustris DX-1 lipopolysaccharide biosynthesis protein YP_004109072.1 2945966 R 652103 CDS YP_004109073.1 316934091 10064976 2948598..2949737 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: nwi:Nwi_1413 glycosyl transferase, group 1; glycosyl transferase group 1 protein 2949737 10064976 Rpdx1_2756 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004109073.1 2948598 D 652103 CDS YP_004109074.1 316934092 10064977 2949851..2951410 1 NC_014834.1 KEGG: bra:BRADO4231 putative sugar transferase family protein; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; undecaprenyl-phosphate glucose phosphotransferase 2951410 10064977 Rpdx1_2757 Rhodopseudomonas palustris DX-1 undecaprenyl-phosphate glucose phosphotransferase YP_004109074.1 2949851 D 652103 CDS YP_004109075.1 316934093 10064978 complement(2951569..2952351) 1 NC_014834.1 PFAM: protein of unknown function DUF169; KEGG: bja:bll4979 hypothetical protein; hypothetical protein 2952351 10064978 Rpdx1_2758 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109075.1 2951569 R 652103 CDS YP_004109076.1 316934094 10064979 2952571..2952888 1 NC_014834.1 KEGG: bcv:Bcav_1078 protein of unknown function DUF418; hypothetical protein 2952888 10064979 Rpdx1_2759 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109076.1 2952571 D 652103 CDS YP_004109077.1 316934095 10064980 complement(2953003..2953440) 1 NC_014834.1 KEGG: bbt:BBta_7560 hypothetical protein; hypothetical protein 2953440 10064980 Rpdx1_2760 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109077.1 2953003 R 652103 CDS YP_004109078.1 316934096 10064982 complement(2954034..2954786) 1 NC_014834.1 KEGG: bja:bll5018 hypothetical protein; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 2954786 10064982 Rpdx1_2761 Rhodopseudomonas palustris DX-1 MerR family transcriptional regulator YP_004109078.1 2954034 R 652103 CDS YP_004109079.1 316934097 10064983 complement(2954801..2955157) 1 NC_014834.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: nwi:Nwi_1408 integration host factor subunit alpha; SMART: histone family protein DNA-binding protein; integration host factor subunit alpha 2955157 10064983 Rpdx1_2762 Rhodopseudomonas palustris DX-1 integration host factor subunit alpha YP_004109079.1 2954801 R 652103 CDS YP_004109080.1 316934098 10064984 complement(2955300..2956277) 1 NC_014834.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: nha:Nham_1586 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 2956277 10064984 Rpdx1_2763 Rhodopseudomonas palustris DX-1 3-oxoacyl-(acyl-carrier-protein) synthase III YP_004109080.1 2955300 R 652103 CDS YP_004109081.1 316934099 10064985 complement(2956274..2957335) 1 NC_014834.1 KEGG: nha:Nham_1585 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; fatty acid/phospholipid synthesis protein PlsX 2957335 10064985 Rpdx1_2764 Rhodopseudomonas palustris DX-1 fatty acid/phospholipid synthesis protein PlsX YP_004109081.1 2956274 R 652103 CDS YP_004109082.1 316934100 10064986 complement(2957582..2958145) 1 NC_014834.1 PFAM: protein of unknown function DUF177; KEGG: nha:Nham_1584 hypothetical protein; hypothetical protein 2958145 10064986 Rpdx1_2765 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109082.1 2957582 R 652103 CDS YP_004109083.1 316934101 10064987 complement(2958164..2958700) 1 NC_014834.1 PFAM: Ubiquinol-cytochrome c chaperone/UPF0174; KEGG: nha:Nham_1583 ubiquinol-cytochrome c chaperone; Ubiquinol-cytochrome c chaperone 2958700 10064987 Rpdx1_2766 Rhodopseudomonas palustris DX-1 Ubiquinol-cytochrome c chaperone YP_004109083.1 2958164 R 652103 CDS YP_004109084.1 316934102 10064988 2958809..2959294 1 NC_014834.1 PFAM: SmpA/OmlA domain protein; KEGG: bja:blr5024 hypothetical protein; SmpA/OmlA domain-containing protein 2959294 10064988 Rpdx1_2767 Rhodopseudomonas palustris DX-1 SmpA/OmlA domain-containing protein YP_004109084.1 2958809 D 652103 CDS YP_004109085.1 316934103 10064989 complement(2959377..2960240) 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: noc:Noc_0991 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2960240 10064989 Rpdx1_2768 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004109085.1 2959377 R 652103 CDS YP_004109086.1 316934104 10064990 complement(2960278..2960436) 1 NC_014834.1 KEGG: bbt:BBta_7678 hypothetical protein; hypothetical protein 2960436 10064990 Rpdx1_2769 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109086.1 2960278 R 652103 CDS YP_004109087.1 316934105 10064992 2961902..2962609 1 NC_014834.1 KEGG: hmu:Hmuk_1635 methyl-accepting chemotaxis sensory transducer; hypothetical protein 2962609 10064992 Rpdx1_2771 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109087.1 2961902 D 652103 CDS YP_004109088.1 316934106 10064993 complement(2962845..2964965) 1 NC_014834.1 TIGRFAM: V-type H(+)-translocating pyrophosphatase; KEGG: oca:OCAR_5867 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; V-type H(+)-translocating pyrophosphatase 2964965 10064993 Rpdx1_2772 Rhodopseudomonas palustris DX-1 V-type H(+)-translocating pyrophosphatase YP_004109088.1 2962845 R 652103 CDS YP_004109089.1 316934107 10064994 complement(2965196..2966167) 1 NC_014834.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: nha:Nham_1820 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase 2966167 10064994 Rpdx1_2773 Rhodopseudomonas palustris DX-1 thiamine-monophosphate kinase YP_004109089.1 2965196 R 652103 CDS YP_004109090.1 316934108 10064995 complement(2966393..2966914) 1 NC_014834.1 KEGG: bja:bll5028 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor 2966914 10064995 Rpdx1_2774 Rhodopseudomonas palustris DX-1 NusB antitermination factor YP_004109090.1 2966393 R 652103 CDS YP_004109091.1 316934109 10064996 complement(2966920..2967411) 1 NC_014834.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; KEGG: nha:Nham_1818 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 2967411 10064996 Rpdx1_2775 Rhodopseudomonas palustris DX-1 6,7-dimethyl-8-ribityllumazine synthase YP_004109091.1 2966920 R 652103 CDS YP_004109092.1 316934110 10064997 complement(2967627..2968235) 1 NC_014834.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: bja:bll5030 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 2968235 10064997 Rpdx1_2776 Rhodopseudomonas palustris DX-1 riboflavin synthase subunit alpha YP_004109092.1 2967627 R 652103 CDS YP_004109093.1 316934111 10064998 complement(2968246..2969415) 1 NC_014834.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: bja:bll5031 riboflavin biosynthesis protein; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD 2969415 10064998 Rpdx1_2777 Rhodopseudomonas palustris DX-1 riboflavin biosynthesis protein RibD YP_004109093.1 2968246 R 652103 CDS YP_004109094.1 316934112 10064999 complement(2969412..2969894) 1 NC_014834.1 PFAM: ATP-cone domain protein; KEGG: nha:Nham_1815 transcriptional regulator NrdR; ATP-cone domain-containing protein 2969894 10064999 Rpdx1_2778 Rhodopseudomonas palustris DX-1 ATP-cone domain-containing protein YP_004109094.1 2969412 R 652103 CDS YP_004109095.1 316934113 10065000 complement(2970040..2971338) 1 NC_014834.1 KEGG: bja:bll5033 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 2971338 10065000 Rpdx1_2779 Rhodopseudomonas palustris DX-1 glycine hydroxymethyltransferase YP_004109095.1 2970040 R 652103 CDS YP_004109096.1 316934114 10065001 2971589..2971843 1 NC_014834.1 PFAM: Rv0623 family protein transcription factor; KEGG: mno:Mnod_8286 Rv0623 family protein transcription factor; protein transcription factor 2971843 10065001 Rpdx1_2780 Rhodopseudomonas palustris DX-1 protein transcription factor YP_004109096.1 2971589 D 652103 CDS YP_004109097.1 316934115 10065002 2971843..2972223 1 NC_014834.1 PFAM: PilT protein domain protein; KEGG: mno:Mnod_8285 PilT protein domain protein; PilT domain-containing protein 2972223 10065002 Rpdx1_2781 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004109097.1 2971843 D 652103 CDS YP_004109098.1 316934116 10065003 2972406..2972771 1 NC_014834.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: pzu:PHZ_c2830 hypothetical protein; cupin 2972771 10065003 Rpdx1_2782 Rhodopseudomonas palustris DX-1 cupin YP_004109098.1 2972406 D 652103 CDS YP_004109099.1 316934117 10065004 complement(2972957..2973163) 1 NC_014834.1 KEGG: hba:Hbal_0687 hypothetical protein; hypothetical protein 2973163 10065004 Rpdx1_2783 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109099.1 2972957 R 652103 CDS YP_004109100.1 316934118 10065005 2973437..2974315 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: nha:Nham_2099 putative glutathione S-transferase YghU; glutathione S-transferase domain-containing protein 2974315 10065005 Rpdx1_2784 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004109100.1 2973437 D 652103 CDS YP_004109101.1 316934119 10065006 complement(2974507..2974929) 1 NC_014834.1 PFAM: globin; KEGG: bbt:BBta_6298 hypothetical protein; globin 2974929 10065006 Rpdx1_2785 Rhodopseudomonas palustris DX-1 globin YP_004109101.1 2974507 R 652103 CDS YP_004109102.1 316934120 10065007 complement(2974990..2975562) 1 NC_014834.1 KEGG: msl:Msil_2979 hypothetical protein; hypothetical protein 2975562 10065007 Rpdx1_2786 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109102.1 2974990 R 652103 CDS YP_004109103.1 316934121 10065008 complement(2975578..2975793) 1 NC_014834.1 KEGG: bja:bsl5034 hypothetical protein; hypothetical protein 2975793 10065008 Rpdx1_2787 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109103.1 2975578 R 652103 CDS YP_004109104.1 316934122 10065009 complement(2975810..2976037) 1 NC_014834.1 KEGG: bja:bsl5035 hypothetical protein; hypothetical protein 2976037 10065009 Rpdx1_2788 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109104.1 2975810 R 652103 CDS YP_004109105.1 316934123 10065010 complement(2976253..2976771) 1 NC_014834.1 KEGG: bbt:BBta_4653 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 2976771 10065010 Rpdx1_2789 Rhodopseudomonas palustris DX-1 regulatory protein MarR YP_004109105.1 2976253 R 652103 CDS YP_004109106.1 316934124 10065011 complement(2977125..2978690) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rer:RER_13820 acyl-CoA synthetase; AMP-dependent synthetase and ligase 2978690 10065011 Rpdx1_2790 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004109106.1 2977125 R 652103 CDS YP_004109107.1 316934125 10065012 complement(2978764..2979228) 1 NC_014834.1 KEGG: bra:BRADO4435 hypothetical protein; hypothetical protein 2979228 10065012 Rpdx1_2791 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109107.1 2978764 R 652103 CDS YP_004109108.1 316934126 10065013 2979414..2980466 1 NC_014834.1 KEGG: bra:BRADO4436 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; porphobilinogen synthase 2980466 10065013 Rpdx1_2792 Rhodopseudomonas palustris DX-1 porphobilinogen synthase YP_004109108.1 2979414 D 652103 CDS YP_004109109.1 316934127 10065014 2980631..2981161 1 NC_014834.1 PFAM: RDD domain containing protein; KEGG: nha:Nham_2241 hypothetical protein; RDD domain-containing protein 2981161 10065014 Rpdx1_2793 Rhodopseudomonas palustris DX-1 RDD domain-containing protein YP_004109109.1 2980631 D 652103 CDS YP_004109110.1 316934128 10065015 2981230..2982006 1 NC_014834.1 PFAM: Arginine-tRNA-protein transferase domain protein; KEGG: bja:blr5039 arginyl-tRNA-protein transferase; arginine-tRNa-protein transferase domain-containing protein 2982006 10065015 Rpdx1_2794 Rhodopseudomonas palustris DX-1 arginine-tRNa-protein transferase domain-containing protein YP_004109110.1 2981230 D 652103 CDS YP_004109111.1 316934129 10065016 complement(2982098..2982994) 1 NC_014834.1 PFAM: secretion protein HlyD family protein; KEGG: rce:RC1_2575 HlyD family secretion protein; secretion protein HlyD family protein 2982994 10065016 Rpdx1_2795 Rhodopseudomonas palustris DX-1 secretion protein HlyD family protein YP_004109111.1 2982098 R 652103 CDS YP_004109112.1 316934130 10065017 complement(2982991..2983206) 1 NC_014834.1 PFAM: protein of unknown function DUF1656; KEGG: rce:RC1_2576 hypothetical protein; hypothetical protein 2983206 10065017 Rpdx1_2796 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109112.1 2982991 R 652103 CDS YP_004109113.1 316934131 10065018 complement(2983196..2985307) 1 NC_014834.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: rce:RC1_2577 fusaric acid resistance protein, putative; fusaric acid resistance protein 2985307 10065018 Rpdx1_2797 Rhodopseudomonas palustris DX-1 fusaric acid resistance protein YP_004109113.1 2983196 R 652103 CDS YP_004109114.1 316934132 10065019 2985394..2986218 1 NC_014834.1 KEGG: rce:RC1_2578 transcriptional regulator, AraC family protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2986218 10065019 Rpdx1_2798 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004109114.1 2985394 D 652103 CDS YP_004109115.1 316934133 10065020 complement(2986276..2987649) 1 NC_014834.1 manually curated; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; KEGG: oca:OCAR_5850 manganese transport protein MntH; PFAM: natural resistance-associated macrophage protein; NRAMP family Mn2+/Fe2+ transporter 2987649 10065020 Rpdx1_2799 Rhodopseudomonas palustris DX-1 NRAMP family Mn2+/Fe2+ transporter YP_004109115.1 2986276 R 652103 CDS YP_004109116.1 316934134 10065021 2987901..2988098 1 NC_014834.1 KEGG: cre:CHLREDRAFT_166702 hypothetical protein; hypothetical protein 2988098 10065021 Rpdx1_2800 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109116.1 2987901 D 652103 CDS YP_004109117.1 316934135 10065022 complement(2988167..2989594) 1 NC_014834.1 PFAM: Citrate transporter; KEGG: bja:bll7122 hypothetical protein; citrate transporter 2989594 10065022 Rpdx1_2801 Rhodopseudomonas palustris DX-1 citrate transporter YP_004109117.1 2988167 R 652103 CDS YP_004109118.1 316934136 10065023 complement(2989684..2991945) 1 NC_014834.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: bja:bll5057 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA topoisomerase IV subunit A 2991945 10065023 Rpdx1_2802 Rhodopseudomonas palustris DX-1 DNA topoisomerase IV subunit A YP_004109118.1 2989684 R 652103 CDS YP_004109119.1 316934137 10065024 complement(2991955..2992467) 1 NC_014834.1 PFAM: helix-turn-helix HxlR type; KEGG: mrd:Mrad2831_0163 HxlR family transcriptional regulator; HxlR family transcriptional regulator 2992467 10065024 Rpdx1_2803 Rhodopseudomonas palustris DX-1 HxlR family transcriptional regulator YP_004109119.1 2991955 R 652103 CDS YP_004109120.1 316934138 10065025 2992548..2993423 1 NC_014834.1 PFAM: Male sterility domain; KEGG: pna:Pnap_0622 NmrA family protein; male sterility domain 2993423 10065025 Rpdx1_2804 Rhodopseudomonas palustris DX-1 male sterility domain YP_004109120.1 2992548 D 652103 CDS YP_004109121.1 316934139 10065026 complement(2993456..2994049) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: tcu:Tcur_2560 transcriptional regulator, TetR family; TetR family transcriptional regulator 2994049 10065026 Rpdx1_2805 Rhodopseudomonas palustris DX-1 TetR family transcriptional regulator YP_004109121.1 2993456 R 652103 CDS YP_004109122.1 316934140 10065027 2994179..2994823 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: reh:H16_A0176 glutathione S-transferase; glutathione S-transferase domain-containing protein 2994823 10065027 Rpdx1_2806 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004109122.1 2994179 D 652103 CDS YP_004109123.1 316934141 10065028 complement(2994838..2995590) 1 NC_014834.1 KEGG: nha:Nham_2248 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; DNA repair protein RecO 2995590 10065028 Rpdx1_2807 Rhodopseudomonas palustris DX-1 DNA repair protein RecO YP_004109123.1 2994838 R 652103 CDS YP_004109124.1 316934142 10065029 complement(2995643..2996044) 1 NC_014834.1 KEGG: bja:bll5059 hypothetical protein; hypothetical protein 2996044 10065029 Rpdx1_2808 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109124.1 2995643 R 652103 CDS YP_004109125.1 316934143 10065030 complement(2996041..2996967) 1 NC_014834.1 KEGG: nha:Nham_2250 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; GTP-binding protein Era 2996967 10065030 Rpdx1_2809 Rhodopseudomonas palustris DX-1 GTP-binding protein Era YP_004109125.1 2996041 R 652103 CDS YP_004109126.1 316934144 10065031 complement(2996957..2997775) 1 NC_014834.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: bra:BRADO4463 ribonuclease III (modular protein); PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 2997775 10065031 Rpdx1_2810 Rhodopseudomonas palustris DX-1 ribonuclease III YP_004109126.1 2996957 R 652103 CDS YP_004109127.1 316934145 10065032 complement(2997772..2998530) 1 NC_014834.1 TIGRFAM: signal peptidase I; KEGG: nwi:Nwi_1919 peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 2998530 10065032 Rpdx1_2811 Rhodopseudomonas palustris DX-1 signal peptidase I YP_004109127.1 2997772 R 652103 CDS YP_004109128.1 316934146 10065033 complement(2998772..2999212) 1 NC_014834.1 KEGG: bra:BRADO4466 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-acyl-carrier-protein synthase 2999212 10065033 Rpdx1_2812 Rhodopseudomonas palustris DX-1 holo-acyl-carrier-protein synthase YP_004109128.1 2998772 R 652103 CDS YP_004109129.1 316934147 10065034 complement(2999209..2999973) 1 NC_014834.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: bja:bll5064 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; pyridoxal phosphate biosynthetic protein PdxJ 2999973 10065034 Rpdx1_2813 Rhodopseudomonas palustris DX-1 pyridoxal phosphate biosynthetic protein PdxJ YP_004109129.1 2999209 R 652103 CDS YP_004109130.1 316934148 10065035 complement(3000121..3002403) 1 NC_014834.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: bra:BRADO4468 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase); PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein; (p)ppGpp synthetase I SpoT/RelA 3002403 10065035 Rpdx1_2814 Rhodopseudomonas palustris DX-1 (p)ppGpp synthetase I SpoT/RelA YP_004109130.1 3000121 R 652103 CDS YP_004109131.1 316934149 10065036 complement(3002674..3003066) 1 NC_014834.1 KEGG: oca:OCAR_5837 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega 3003066 10065036 Rpdx1_2815 Rhodopseudomonas palustris DX-1 DNA-directed RNA polymerase subunit omega YP_004109131.1 3002674 R 652103 CDS YP_004109132.1 316934150 10065037 3003412..3004053 1 NC_014834.1 KEGG: bja:blr5067 hypothetical protein; hypothetical protein 3004053 10065037 Rpdx1_2816 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109132.1 3003412 D 652103 CDS YP_004109133.1 316934151 10065038 3004058..3004732 1 NC_014834.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: nha:Nham_2258 uracil-DNA glycosylase superfamily protein; uracil-DNA glycosylase superfamily protein 3004732 10065038 Rpdx1_2817 Rhodopseudomonas palustris DX-1 uracil-DNA glycosylase superfamily protein YP_004109133.1 3004058 D 652103 CDS YP_004109134.1 316934152 10065039 complement(3004860..3005438) 1 NC_014834.1 PFAM: Redoxin domain protein; KEGG: bja:bll5069 BcpB protein; redoxin domain-containing protein 3005438 10065039 Rpdx1_2818 Rhodopseudomonas palustris DX-1 redoxin domain-containing protein YP_004109134.1 3004860 R 652103 CDS YP_004109135.1 316934153 10065040 complement(3005464..3005937) 1 NC_014834.1 KEGG: nha:Nham_2260 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; SsrA-binding protein 3005937 10065040 Rpdx1_2819 Rhodopseudomonas palustris DX-1 SsrA-binding protein YP_004109135.1 3005464 R 652103 CDS YP_004109136.1 316934154 10065041 complement(3005975..3006454) 1 NC_014834.1 KEGG: bja:bll5071 mechanosensitive channel-like protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 3006454 10065041 Rpdx1_2820 Rhodopseudomonas palustris DX-1 large conductance mechanosensitive channel protein YP_004109136.1 3005975 R 652103 CDS YP_004109137.1 316934155 10065042 complement(3006465..3007355) 1 NC_014834.1 KEGG: nha:Nham_2262 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 3007355 10065042 Rpdx1_2821 Rhodopseudomonas palustris DX-1 dihydrodipicolinate synthase YP_004109137.1 3006465 R 652103 CDS YP_004109138.1 316934156 10065043 complement(3007487..3007894) 1 NC_014834.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bra:BRADO3800 hypothetical protein; cupin 3007894 10065043 Rpdx1_2822 Rhodopseudomonas palustris DX-1 cupin YP_004109138.1 3007487 R 652103 CDS YP_004109139.1 316934157 10065044 complement(3007907..3008620) 1 NC_014834.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bbt:BBta_4131 hypothetical protein; dimethylmenaquinone methyltransferase 3008620 10065044 Rpdx1_2823 Rhodopseudomonas palustris DX-1 dimethylmenaquinone methyltransferase YP_004109139.1 3007907 R 652103 CDS YP_004109140.1 316934158 10065045 3008841..3009569 1 NC_014834.1 KEGG: nha:Nham_2040 hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 3009569 10065045 Rpdx1_2824 Rhodopseudomonas palustris DX-1 allophanate hydrolase subunit 1 YP_004109140.1 3008841 D 652103 CDS YP_004109141.1 316934159 10065046 3009566..3010576 1 NC_014834.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: nha:Nham_2041 allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; urea amidolyase-like protein 3010576 10065046 Rpdx1_2825 Rhodopseudomonas palustris DX-1 urea amidolyase-like protein YP_004109141.1 3009566 D 652103 CDS YP_004109142.1 316934160 10065047 3010604..3011368 1 NC_014834.1 PFAM: LamB/YcsF family protein; KEGG: bja:blr4568 LamB/YcsF family protein; LamB/YcsF family protein 3011368 10065047 Rpdx1_2826 Rhodopseudomonas palustris DX-1 LamB/YcsF family protein YP_004109142.1 3010604 D 652103 CDS YP_004109143.1 316934161 10065048 complement(3011384..3012235) 1 NC_014834.1 manually curated; KEGG: oca:OCAR_6853 probable arylformamidase (kynurenine formamidase) (KF); putative arylformamidase 3012235 10065048 Rpdx1_2827 Rhodopseudomonas palustris DX-1 putative arylformamidase YP_004109143.1 3011384 R 652103 CDS YP_004109144.1 316934162 10065049 complement(3012232..3013053) 1 NC_014834.1 KEGG: mms:mma_3084 sulfonate/nitrate transport system ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3013053 10065049 Rpdx1_2828 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109144.1 3012232 R 652103 CDS YP_004109145.1 316934163 10065050 complement(3013046..3013933) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mms:mma_3085 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; binding-protein-dependent transporter inner membrane component 3013933 10065050 Rpdx1_2829 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004109145.1 3013046 R 652103 CDS YP_004109146.1 316934164 10065051 complement(3013941..3014897) 1 NC_014834.1 SMART: extracellular solute-binding protein family 3; KEGG: mms:mma_3086 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component; family 3 extracellular solute-binding protein 3014897 10065051 Rpdx1_2830 Rhodopseudomonas palustris DX-1 family 3 extracellular solute-binding protein YP_004109146.1 3013941 R 652103 CDS YP_004109147.1 316934165 10065052 3014999..3015913 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbt:BBta_1913 LysR family transcriptional regulator; LysR family transcriptional regulator 3015913 10065052 Rpdx1_2831 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004109147.1 3014999 D 652103 CDS YP_004109148.1 316934166 10065053 3016317..3017642 1 NC_014834.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: bra:BRADO3790 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 3017642 10065053 Rpdx1_2832 Rhodopseudomonas palustris DX-1 MiaB-like tRNA modifying protein YliG YP_004109148.1 3016317 D 652103 CDS YP_004109149.1 316934167 10065054 complement(3017798..3018772) 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:bll4583 quinone oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 3018772 10065054 Rpdx1_2833 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004109149.1 3017798 R 652103 CDS YP_004109150.1 316934168 10065055 complement(3018858..3019580) 1 NC_014834.1 PFAM: Integral membrane protein TerC; KEGG: bbt:BBta_4147 hypothetical protein; integral membrane protein TerC 3019580 10065055 Rpdx1_2834 Rhodopseudomonas palustris DX-1 integral membrane protein TerC YP_004109150.1 3018858 R 652103 CDS YP_004109151.1 316934169 10065056 complement(3019577..3020308) 1 NC_014834.1 KEGG: nha:Nham_2046 phosphatidylcholine synthase; PFAM: CDP-alcohol phosphatidyltransferase; phosphatidylcholine synthase 3020308 10065056 Rpdx1_2835 Rhodopseudomonas palustris DX-1 phosphatidylcholine synthase YP_004109151.1 3019577 R 652103 CDS YP_004109152.1 316934170 10065057 3020391..3021638 1 NC_014834.1 KEGG: bja:blr4586 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; Ubiquinone biosynthesis hydroxylase 3021638 10065057 Rpdx1_2836 Rhodopseudomonas palustris DX-1 Ubiquinone biosynthesis hydroxylase YP_004109152.1 3020391 D 652103 CDS YP_004109153.1 316934171 10065058 complement(3021644..3022600) 1 NC_014834.1 PFAM: Auxin Efflux Carrier; KEGG: bja:bll4587 malonate transporter; auxin efflux carrier 3022600 10065058 Rpdx1_2837 Rhodopseudomonas palustris DX-1 auxin efflux carrier YP_004109153.1 3021644 R 652103 CDS YP_004109154.1 316934172 10065059 3022721..3023053 1 NC_014834.1 KEGG: bja:blr4588 hypothetical protein; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; hemimethylated DNA-binding protein 3023053 10065059 Rpdx1_2838 Rhodopseudomonas palustris DX-1 hemimethylated DNA-binding protein YP_004109154.1 3022721 D 652103 CDS YP_004109155.1 316934173 10065060 complement(3023296..3024045) 1 NC_014834.1 PFAM: Invasion associated locus B family protein; KEGG: bja:bll4589 hypothetical protein; invasion associated locus B family protein 3024045 10065060 Rpdx1_2839 Rhodopseudomonas palustris DX-1 invasion associated locus B family protein YP_004109155.1 3023296 R 652103 CDS YP_004109156.1 316934174 10065061 3024262..3026142 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: nwi:Nwi_1510 extracellular solute-binding protein; family 5 extracellular solute-binding protein 3026142 10065061 Rpdx1_2840 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004109156.1 3024262 D 652103 CDS YP_004109157.1 316934175 10065062 3026147..3027682 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr4591 hypothetical protein; AMP-dependent synthetase and ligase 3027682 10065062 Rpdx1_2841 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004109157.1 3026147 D 652103 CDS YP_004109158.1 316934176 10065063 3027732..3028964 1 NC_014834.1 KEGG: nha:Nham_2052 hypothetical protein; hypothetical protein 3028964 10065063 Rpdx1_2842 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109158.1 3027732 D 652103 CDS YP_004109159.1 316934177 10065064 complement(3029317..3032835) 1 NC_014834.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: bra:BRADO3771 transcription repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 3032835 10065064 Rpdx1_2843 Rhodopseudomonas palustris DX-1 transcription-repair coupling factor YP_004109159.1 3029317 R 652103 CDS YP_004109160.1 316934178 10065065 complement(3032832..3033122) 1 NC_014834.1 PFAM: protein of unknown function DUF339; KEGG: bja:bsl4602 hypothetical protein; hypothetical protein 3033122 10065065 Rpdx1_2844 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109160.1 3032832 R 652103 CDS YP_004109161.1 316934179 10065066 3033279..3035381 1 NC_014834.1 KEGG: nha:Nham_2055 DEAD/DEAH box helicase-like; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 3035381 10065066 Rpdx1_2845 Rhodopseudomonas palustris DX-1 DEAD/DEAH box helicase YP_004109161.1 3033279 D 652103 CDS YP_004109162.1 316934180 10065067 complement(3035531..3036334) 1 NC_014834.1 PFAM: protein of unknown function DUF502; KEGG: nha:Nham_2056 hypothetical protein; hypothetical protein 3036334 10065067 Rpdx1_2846 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109162.1 3035531 R 652103 CDS YP_004109163.1 316934181 10065068 complement(3036545..3038371) 1 NC_014834.1 KEGG: bra:BRADO3763 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); glucosamine/fructose-6-phosphate aminotransferase 3038371 10065068 Rpdx1_2847 Rhodopseudomonas palustris DX-1 glucosamine/fructose-6-phosphate aminotransferase YP_004109163.1 3036545 R 652103 CDS YP_004109164.1 316934182 10065069 complement(3038498..3039856) 1 NC_014834.1 KEGG: nha:Nham_1784 nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; UDP-N-acetylglucosamine pyrophosphorylase 3039856 10065069 Rpdx1_2848 Rhodopseudomonas palustris DX-1 UDP-N-acetylglucosamine pyrophosphorylase YP_004109164.1 3038498 R 652103 CDS YP_004109165.1 316934183 10065070 3040024..3041547 1 NC_014834.1 PFAM: Sporulation domain protein; KEGG: nha:Nham_1783 hypothetical protein; sporulation domain-containing protein 3041547 10065070 Rpdx1_2849 Rhodopseudomonas palustris DX-1 sporulation domain-containing protein YP_004109165.1 3040024 D 652103 CDS YP_004109166.1 316934184 10065071 3041620..3042000 1 NC_014834.1 KEGG: nha:Nham_1782 hypothetical protein; hypothetical protein 3042000 10065071 Rpdx1_2850 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109166.1 3041620 D 652103 CDS YP_004109167.1 316934185 10065072 complement(3041960..3043570) 1 NC_014834.1 KEGG: bra:BRADO3757 putative beta (1-6) glucans synthase, NdvC-like; putative beta (1-6) glucans synthase 3043570 10065072 Rpdx1_2851 Rhodopseudomonas palustris DX-1 putative beta (1-6) glucans synthase YP_004109167.1 3041960 R 652103 CDS YP_004109168.1 316934186 10065073 3043859..3044446 1 NC_014834.1 manually curated; KEGG: nha:Nham_1780 hypothetical protein; hypothetical protein 3044446 10065073 Rpdx1_2852 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109168.1 3043859 D 652103 CDS YP_004109169.1 316934187 10065074 3044634..3047471 1 NC_014834.1 KEGG: nha:Nham_1779 glycosyl transferase family protein; manually curated; PFAM: glycosyl transferase family 2; glycosyl transferase family 2 protein 3047471 10065074 Rpdx1_2853 Rhodopseudomonas palustris DX-1 glycosyl transferase family 2 protein YP_004109169.1 3044634 D 652103 CDS YP_004109170.1 316934188 10065076 3048063..3048206 1 NC_014834.1 PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_3081 light harvesting protein B-800-850; antenna complex subunit alpha/beta 3048206 10065076 Rpdx1_2854 Rhodopseudomonas palustris DX-1 antenna complex subunit alpha/beta YP_004109170.1 3048063 D 652103 CDS YP_004109171.1 316934189 10065077 3048232..3048411 1 NC_014834.1 PFAM: antenna complex alpha/beta subunit; KEGG: hha:Hhal_1408 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 3048411 10065077 Rpdx1_2855 Rhodopseudomonas palustris DX-1 antenna complex subunit alpha/beta YP_004109171.1 3048232 D 652103 CDS YP_004109172.1 316934190 10065078 complement(3048520..3048723) 1 NC_014834.1 KEGG: bbt:BBta_4350 hypothetical protein; hypothetical protein 3048723 10065078 Rpdx1_2856 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109172.1 3048520 R 652103 CDS YP_004109173.1 316934191 10065079 complement(3048814..3049215) 1 NC_014834.1 PFAM: Endoribonuclease L-PSP; KEGG: bja:bll4678 hypothetical protein; endoribonuclease L-PSP 3049215 10065079 Rpdx1_2857 Rhodopseudomonas palustris DX-1 endoribonuclease L-PSP YP_004109173.1 3048814 R 652103 CDS YP_004109174.1 316934192 10065080 3049404..3050294 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr4679 hypothetical protein; hypothetical protein 3050294 10065080 Rpdx1_2858 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109174.1 3049404 D 652103 CDS YP_004109175.1 316934193 10065081 complement(3050291..3050533) 1 NC_014834.1 KEGG: nha:Nham_1774 hypothetical protein; hypothetical protein 3050533 10065081 Rpdx1_2859 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109175.1 3050291 R 652103 CDS YP_004109176.1 316934194 10065082 3051038..3051253 1 NC_014834.1 KEGG: bbt:BBta_4362 hypothetical protein; hypothetical protein 3051253 10065082 Rpdx1_2860 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109176.1 3051038 D 652103 CDS YP_004109177.1 316934195 10065083 complement(3051647..3052021) 1 NC_014834.1 KEGG: bfl:Bfl351 threonyl-tRNA synthetase; hypothetical protein 3052021 10065083 Rpdx1_2861 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109177.1 3051647 R 652103 CDS YP_004109178.1 316934196 10065084 3053050..3053445 1 NC_014834.1 PFAM: Camphor resistance CrcB protein; KEGG: bja:bll2639 hypothetical protein; camphor resistance CrcB protein 3053445 10065084 Rpdx1_2862 Rhodopseudomonas palustris DX-1 camphor resistance CrcB protein YP_004109178.1 3053050 D 652103 CDS YP_004109179.1 316934197 10065085 3053482..3054300 1 NC_014834.1 PFAM: protein of unknown function DUF190; Camphor resistance CrcB protein; KEGG: rsq:Rsph17025_3454 hypothetical protein; hypothetical protein 3054300 10065085 Rpdx1_2863 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109179.1 3053482 D 652103 CDS YP_004109180.1 316934198 10065086 3054507..3054851 1 NC_014834.1 PFAM: protein of unknown function DUF190; KEGG: bja:bll2637 hypothetical protein; hypothetical protein 3054851 10065086 Rpdx1_2864 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109180.1 3054507 D 652103 CDS YP_004109181.1 316934199 10065087 complement(3054958..3056091) 1 NC_014834.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: bja:bll4683 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 3056091 10065087 Rpdx1_2865 Rhodopseudomonas palustris DX-1 queuine tRNA-ribosyltransferase YP_004109181.1 3054958 R 652103 CDS YP_004109182.1 316934200 10065088 complement(3056088..3057170) 1 NC_014834.1 KEGG: nha:Nham_1770 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 3057170 10065088 Rpdx1_2866 Rhodopseudomonas palustris DX-1 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase YP_004109182.1 3056088 R 652103 CDS YP_004109183.1 316934201 10065089 complement(3057351..3057818) 1 NC_014834.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bra:BRADO3995 peptidyl prolyl cis-trans isomerase (rotamase B); cyclophilin type peptidyl-prolyl cis-trans isomerase 3057818 10065089 Rpdx1_2867 Rhodopseudomonas palustris DX-1 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004109183.1 3057351 R 652103 CDS YP_004109184.1 316934202 10065090 complement(3057794..3058237) 1 NC_014834.1 KEGG: nha:Nham_1768 hypothetical protein; hypothetical protein 3058237 10065090 Rpdx1_2868 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109184.1 3057794 R 652103 CDS YP_004109185.1 316934203 10065091 complement(3058247..3058810) 1 NC_014834.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bbt:BBta_4368 peptidyl-prolyl cis-trans isomerase A (rotamase A); cyclophilin type peptidyl-prolyl cis-trans isomerase 3058810 10065091 Rpdx1_2869 Rhodopseudomonas palustris DX-1 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004109185.1 3058247 R 652103 CDS YP_004109186.1 316934204 10065092 complement(3058827..3059336) 1 NC_014834.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: nha:Nham_1766 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 3059336 10065092 Rpdx1_2870 Rhodopseudomonas palustris DX-1 pantetheine-phosphate adenylyltransferase YP_004109186.1 3058827 R 652103 CDS YP_004109187.1 316934205 10065093 3059673..3059930 1 NC_014834.1 KEGG: nha:Nham_1765 hypothetical protein; hypothetical protein 3059930 10065093 Rpdx1_2871 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109187.1 3059673 D 652103 CDS YP_004109188.1 316934206 10065094 complement(3060115..3062856) 1 NC_014834.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: bra:BRADO3999 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 3062856 10065094 Rpdx1_2872 Rhodopseudomonas palustris DX-1 DNA gyrase subunit A YP_004109188.1 3060115 R 652103 CDS YP_004109189.1 316934207 10065095 complement(3063059..3064429) 1 NC_014834.1 KEGG: nha:Nham_1842 GTP-binding protein, HSR1-related; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; GTP-binding proten HflX 3064429 10065095 Rpdx1_2873 Rhodopseudomonas palustris DX-1 GTP-binding proten HflX YP_004109189.1 3063059 R 652103 CDS YP_004109190.1 316934208 10065096 complement(3064441..3064689) 1 NC_014834.1 KEGG: bja:bsr4491 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; RNA chaperone Hfq 3064689 10065096 Rpdx1_2874 Rhodopseudomonas palustris DX-1 RNA chaperone Hfq YP_004109190.1 3064441 R 652103 CDS YP_004109191.1 316934209 10065097 complement(3064870..3065727) 1 NC_014834.1 PFAM: aminotransferase class IV; KEGG: nwi:Nwi_1448 D-amino acid aminotransferase; class IV aminotransferase 3065727 10065097 Rpdx1_2875 Rhodopseudomonas palustris DX-1 class IV aminotransferase YP_004109191.1 3064870 R 652103 CDS YP_004109192.1 316934210 10065098 complement(3065767..3067134) 1 NC_014834.1 KEGG: bbt:BBta_4072 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; Fis family two component sigma54 specific transcriptional regulator 3067134 10065098 Rpdx1_2876 Rhodopseudomonas palustris DX-1 Fis family two component sigma54 specific transcriptional regulator YP_004109192.1 3065767 R 652103 CDS YP_004109193.1 316934211 10065099 complement(3067151..3069442) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: oca:OCAR_6097 nitrogen regulation protein NtrY; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; multi-sensor signal transduction histidine kinase 3069442 10065099 Rpdx1_2877 Rhodopseudomonas palustris DX-1 multi-sensor signal transduction histidine kinase YP_004109193.1 3067151 R 652103 CDS YP_004109194.1 316934212 10065100 complement(3069606..3071048) 1 NC_014834.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: bbt:BBta_4070 nitrogen metabolism transcriptional regulator NtrC; SMART: response regulator receiver; AAA ATPase; Fis family two component sigma54 specific transcriptional regulator 3071048 10065100 Rpdx1_2878 Rhodopseudomonas palustris DX-1 Fis family two component sigma54 specific transcriptional regulator YP_004109194.1 3069606 R 652103 CDS YP_004109195.1 316934213 10065101 complement(3071058..3072230) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: bra:BRADO3867 nitrogen regulation protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; nitrogen specific signal transduction histidine kinase NtrB 3072230 10065101 Rpdx1_2879 Rhodopseudomonas palustris DX-1 nitrogen specific signal transduction histidine kinase NtrB YP_004109195.1 3071058 R 652103 CDS YP_004109196.1 316934214 10065102 complement(3072227..3073261) 1 NC_014834.1 manually curated; TIGRFAM: TIM-barrel protein, nifR3 family; KEGG: bja:blr4486 nitrogen regulation protein; PFAM: dihydrouridine synthase DuS; nifR3 family TIM-barrel protein 3073261 10065102 Rpdx1_2880 Rhodopseudomonas palustris DX-1 nifR3 family TIM-barrel protein YP_004109196.1 3072227 R 652103 CDS YP_004109197.1 316934215 10065103 3073502..3074698 1 NC_014834.1 KEGG: nha:Nham_1834 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3074698 10065103 Rpdx1_2881 Rhodopseudomonas palustris DX-1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_004109197.1 3073502 D 652103 CDS YP_004109198.1 316934216 10065104 3074701..3075321 1 NC_014834.1 PFAM: CinA domain protein; KEGG: nha:Nham_1833 CinA-like; CinA domain-containing protein 3075321 10065104 Rpdx1_2882 Rhodopseudomonas palustris DX-1 CinA domain-containing protein YP_004109198.1 3074701 D 652103 CDS YP_004109199.1 316934217 10065105 complement(3075547..3076020) 1 NC_014834.1 PFAM: cyclase/dehydrase; KEGG: nha:Nham_1832 cyclase/dehydrase; cyclase/dehydrase 3076020 10065105 Rpdx1_2883 Rhodopseudomonas palustris DX-1 cyclase/dehydrase YP_004109199.1 3075547 R 652103 CDS YP_004109200.1 316934218 10065106 complement(3076047..3077006) 1 NC_014834.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: nwi:Nwi_1439 lipoyl synthase; PFAM: Radical SAM domain protein; lipoic acid synthetase 3077006 10065106 Rpdx1_2884 Rhodopseudomonas palustris DX-1 lipoic acid synthetase YP_004109200.1 3076047 R 652103 CDS YP_004109201.1 316934219 10065107 3077155..3077781 1 NC_014834.1 KEGG: nwi:Nwi_1438 3-methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); DNA-3-methyladenine glycosylase 3077781 10065107 Rpdx1_2885 Rhodopseudomonas palustris DX-1 DNA-3-methyladenine glycosylase YP_004109201.1 3077155 D 652103 CDS YP_004109202.1 316934220 10065108 complement(3077935..3078495) 1 NC_014834.1 KEGG: gur:Gura_0796 hypothetical protein; hypothetical protein 3078495 10065108 Rpdx1_2886 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109202.1 3077935 R 652103 CDS YP_004109203.1 316934221 10065109 complement(3078662..3081535) 1 NC_014834.1 KEGG: nha:Nham_1828 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 3081535 10065109 Rpdx1_2887 Rhodopseudomonas palustris DX-1 valyl-tRNA synthetase YP_004109203.1 3078662 R 652103 CDS YP_004109204.1 316934222 10065110 complement(3081677..3082429) 1 NC_014834.1 PFAM: Protein of unknown function DUF2497; KEGG: bja:blr4474 hypothetical protein; hypothetical protein 3082429 10065110 Rpdx1_2888 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109204.1 3081677 R 652103 CDS YP_004109205.1 316934223 10065111 complement(3082756..3084147) 1 NC_014834.1 KEGG: nha:Nham_1826 type I secretion outer membrane protein, TolC; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion membrane fusion protein 3084147 10065111 Rpdx1_2889 Rhodopseudomonas palustris DX-1 TolC family type I secretion membrane fusion protein YP_004109205.1 3082756 R 652103 CDS YP_004109206.1 316934224 10065112 complement(3084357..3085022) 1 NC_014834.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: nha:Nham_1787 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 3085022 10065112 Rpdx1_2890 Rhodopseudomonas palustris DX-1 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004109206.1 3084357 R 652103 CDS YP_004109207.1 316934225 10065114 3085554..3085916 1 NC_014834.1 KEGG: bra:BRADO3004 putative signal peptide; hypothetical protein 3085916 10065114 Rpdx1_2891 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109207.1 3085554 D 652103 CDS YP_004109208.1 316934226 10065115 3086106..3086282 1 NC_014834.1 KEGG: bbt:BBta_3938 hypothetical protein; hypothetical protein 3086282 10065115 Rpdx1_2892 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109208.1 3086106 D 652103 CDS YP_004109209.1 316934227 10065116 complement(3086301..3087434) 1 NC_014834.1 KEGG: azl:AZL_019960 alginate O-acetyltransferase; alginate O-acetyltransferase 3087434 10065116 Rpdx1_2893 Rhodopseudomonas palustris DX-1 alginate O-acetyltransferase YP_004109209.1 3086301 R 652103 CDS YP_004109210.1 316934228 10065117 complement(3087437..3088906) 1 NC_014834.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: azl:AZL_019970 membrane bound O-acyl transferase; membrane bound O-acyl transferase 3088906 10065117 Rpdx1_2894 Rhodopseudomonas palustris DX-1 membrane bound O-acyl transferase YP_004109210.1 3087437 R 652103 CDS YP_004109211.1 316934229 10065119 complement(3089259..3089987) 1 NC_014834.1 PFAM: DTW domain containing protein; KEGG: nha:Nham_2062 hypothetical protein; DTW domain-containing protein 3089987 10065119 Rpdx1_2895 Rhodopseudomonas palustris DX-1 DTW domain-containing protein YP_004109211.1 3089259 R 652103 CDS YP_004109212.1 316934230 10065120 complement(3089995..3093102) 1 NC_014834.1 PFAM: acriflavin resistance protein; KEGG: nha:Nham_2063 acriflavin resistance protein; acriflavin resistance protein 3093102 10065120 Rpdx1_2896 Rhodopseudomonas palustris DX-1 acriflavin resistance protein YP_004109212.1 3089995 R 652103 CDS YP_004109213.1 316934231 10065121 complement(3093102..3096236) 1 NC_014834.1 PFAM: acriflavin resistance protein; KEGG: bja:blr4457 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 3096236 10065121 Rpdx1_2897 Rhodopseudomonas palustris DX-1 acriflavin resistance protein YP_004109213.1 3093102 R 652103 CDS YP_004109214.1 316934232 10065122 complement(3096302..3097666) 1 NC_014834.1 KEGG: bbt:BBta_3932 multidrug resistance protein MdtA precursor; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3097666 10065122 Rpdx1_2898 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004109214.1 3096302 R 652103 CDS YP_004109215.1 316934233 10065123 complement(3097656..3099104) 1 NC_014834.1 KEGG: nha:Nham_2066 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 3099104 10065123 Rpdx1_2899 Rhodopseudomonas palustris DX-1 RND efflux system outer membrane lipoprotein YP_004109215.1 3097656 R 652103 CDS YP_004109216.1 316934234 10065124 3099534..3100847 1 NC_014834.1 PFAM: amine oxidase; KEGG: bbt:BBta_3930 hypothetical protein; amine oxidase 3100847 10065124 Rpdx1_2900 Rhodopseudomonas palustris DX-1 amine oxidase YP_004109216.1 3099534 D 652103 CDS YP_004109217.1 316934235 10065125 3100850..3101695 1 NC_014834.1 PFAM: protein of unknown function DUF1365; KEGG: bra:BRADO3907 hypothetical protein; hypothetical protein 3101695 10065125 Rpdx1_2901 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109217.1 3100850 D 652103 CDS YP_004109218.1 316934236 10065126 3101750..3102979 1 NC_014834.1 KEGG: bbt:BBta_3928 putative cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3102979 10065126 Rpdx1_2902 Rhodopseudomonas palustris DX-1 cyclopropane-fatty-acyl-phospholipid synthase YP_004109218.1 3101750 D 652103 CDS YP_004109219.1 316934237 10065127 3103091..3104128 1 NC_014834.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: oca:OCAR_6061 cysteine synthase A; pyridoxal-5'-phosphate-dependent protein subunit beta 3104128 10065127 Rpdx1_2903 Rhodopseudomonas palustris DX-1 pyridoxal-5'-phosphate-dependent protein subunit beta YP_004109219.1 3103091 D 652103 CDS YP_004109220.1 316934238 10065128 3104276..3104545 1 NC_014834.1 KEGG: cai:Caci_7102 hypothetical protein; hypothetical protein 3104545 10065128 Rpdx1_2904 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109220.1 3104276 D 652103 CDS YP_004109221.1 316934239 10065129 complement(3104788..3105528) 1 NC_014834.1 KEGG: bra:BRADO3910 putative amino acid transport protein, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3105528 10065129 Rpdx1_2905 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109221.1 3104788 R 652103 CDS YP_004109222.1 316934240 10065130 complement(3105544..3107049) 1 NC_014834.1 KEGG: nha:Nham_2069 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3107049 10065130 Rpdx1_2906 Rhodopseudomonas palustris DX-1 polar amino acid ABC transporter inner membrane subunit YP_004109222.1 3105544 R 652103 CDS YP_004109223.1 316934241 10065131 complement(3107046..3108251) 1 NC_014834.1 KEGG: nha:Nham_2070 amino acid ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3108251 10065131 Rpdx1_2907 Rhodopseudomonas palustris DX-1 polar amino acid ABC transporter inner membrane subunit YP_004109223.1 3107046 R 652103 CDS YP_004109224.1 316934242 10065132 complement(3108272..3109288) 1 NC_014834.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: bra:BRADO3913 putative amino-acid ABC transporter, substrate-binding protein; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter periplasmic-binding protein 3109288 10065132 Rpdx1_2908 Rhodopseudomonas palustris DX-1 cationic amino acid ABC transporter periplasmic-binding protein YP_004109224.1 3108272 R 652103 CDS YP_004109225.1 316934243 10065133 3109614..3110810 1 NC_014834.1 KEGG: bra:BRADO3914 cystathionine beta-lyase, PLP-dependent (beta-cystathionase); TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; cystathionine beta-lyase 3110810 10065133 Rpdx1_2909 Rhodopseudomonas palustris DX-1 cystathionine beta-lyase YP_004109225.1 3109614 D 652103 CDS YP_004109226.1 316934244 10065134 complement(3110980..3111318) 1 NC_014834.1 PFAM: lipid A biosynthesis domain protein; KEGG: oca:OCAR_6054 lipid A biosynthesis domain protein; lipid A biosynthesis domain-containing protein 3111318 10065134 Rpdx1_2910 Rhodopseudomonas palustris DX-1 lipid A biosynthesis domain-containing protein YP_004109226.1 3110980 R 652103 CDS YP_004109227.1 316934245 10065135 complement(3111318..3112070) 1 NC_014834.1 PFAM: glycosyl transferase family 2; KEGG: nha:Nham_2075 glycosyl transferase family protein; glycosyl transferase family 2 protein 3112070 10065135 Rpdx1_2911 Rhodopseudomonas palustris DX-1 glycosyl transferase family 2 protein YP_004109227.1 3111318 R 652103 CDS YP_004109228.1 316934246 10065136 complement(3112137..3112979) 1 NC_014834.1 KEGG: bja:blr4441 hypothetical protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase PA-phosphatase-like protein 3112979 10065136 Rpdx1_2912 Rhodopseudomonas palustris DX-1 phosphoesterase PA-phosphatase-like protein YP_004109228.1 3112137 R 652103 CDS YP_004109229.1 316934247 10065137 complement(3112981..3114726) 1 NC_014834.1 PFAM: glycosyl transferase family 39; KEGG: bbt:BBta_3917 glycosyl transferase family protein 39; glycosyl transferase family protein 3114726 10065137 Rpdx1_2913 Rhodopseudomonas palustris DX-1 glycosyl transferase family protein YP_004109229.1 3112981 R 652103 CDS YP_004109230.1 316934248 10065138 complement(3114777..3116972) 1 NC_014834.1 TIGRFAM: penicillin-binding protein 1C; KEGG: nha:Nham_2077 penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; penicillin-binding protein 1C 3116972 10065138 Rpdx1_2914 Rhodopseudomonas palustris DX-1 penicillin-binding protein 1C YP_004109230.1 3114777 R 652103 CDS YP_004109231.1 316934249 10065139 complement(3116969..3122182) 1 NC_014834.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: nha:Nham_2078 alpha-2-macroglobulin-like; alpha-2-macroglobulin domain-containing protein 3122182 10065139 Rpdx1_2915 Rhodopseudomonas palustris DX-1 alpha-2-macroglobulin domain-containing protein YP_004109231.1 3116969 R 652103 CDS YP_004109232.1 316934250 10065141 3122698..3123348 1 NC_014834.1 KEGG: pfl:PFL_2817 hypothetical protein; hypothetical protein 3123348 10065141 Rpdx1_2916 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109232.1 3122698 D 652103 CDS YP_004109233.1 316934251 10065142 complement(3123450..3123887) 1 NC_014834.1 KEGG: bja:blr5152 hypothetical protein; hypothetical protein 3123887 10065142 Rpdx1_2917 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109233.1 3123450 R 652103 CDS YP_004109234.1 316934252 10065143 3124120..3124473 1 NC_014834.1 KEGG: bpt:Bpet4408 hypothetical protein; hypothetical protein 3124473 10065143 Rpdx1_2918 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109234.1 3124120 D 652103 CDS YP_004109235.1 316934253 10065144 complement(3124474..3124953) 1 NC_014834.1 PFAM: protein of unknown function DUF1212; KEGG: hypothetical protein; hypothetical protein 3124953 10065144 Rpdx1_2919 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109235.1 3124474 R 652103 CDS YP_004109236.1 316934254 10065145 complement(3124950..3125756) 1 NC_014834.1 PFAM: protein of unknown function DUF1212; KEGG: hypothetical protein; hypothetical protein 3125756 10065145 Rpdx1_2920 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109236.1 3124950 R 652103 CDS YP_004109237.1 316934255 10065146 3125976..3126317 1 NC_014834.1 KEGG: met:M446_4370 triple helix repeat-containing collagen; triple helix repeat-containing collagen 3126317 10065146 Rpdx1_2921 Rhodopseudomonas palustris DX-1 triple helix repeat-containing collagen YP_004109237.1 3125976 D 652103 CDS YP_004109238.1 316934256 10065147 complement(3126366..3126824) 1 NC_014834.1 KEGG: bja:blr2405 peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type; peptidyl-prolyl isomerase 3126824 10065147 Rpdx1_2922 Rhodopseudomonas palustris DX-1 peptidyl-prolyl isomerase YP_004109238.1 3126366 R 652103 CDS YP_004109239.1 316934257 10065148 3127060..3127194 1 NC_014834.1 KEGG: nha:Nham_2176 hypothetical protein; hypothetical protein 3127194 10065148 Rpdx1_2923 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109239.1 3127060 D 652103 CDS YP_004109240.1 316934258 10065149 complement(3127238..3127480) 1 NC_014834.1 TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: dac:Daci_3133 pentapeptide MXKDX repeat-containing protein; pentapeptide MXKDX repeat-containing protein 3127480 10065149 Rpdx1_2924 Rhodopseudomonas palustris DX-1 pentapeptide MXKDX repeat-containing protein YP_004109240.1 3127238 R 652103 CDS YP_004109241.1 316934259 10065150 complement(3127661..3128614) 1 NC_014834.1 PFAM: pyruvate carboxyltransferase; KEGG: bja:blr4422 hydroxymethylglutaryl-CoA lyase; pyruvate carboxyltransferase 3128614 10065150 Rpdx1_2925 Rhodopseudomonas palustris DX-1 pyruvate carboxyltransferase YP_004109241.1 3127661 R 652103 CDS YP_004109242.1 316934260 10065151 complement(3128686..3130698) 1 NC_014834.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: bja:blr4421 3-methylcrotonyl-CoA carboxylase alpha subunit; carbamoyl-phosphate synthase L chain ATP-binding protein 3130698 10065151 Rpdx1_2926 Rhodopseudomonas palustris DX-1 carbamoyl-phosphate synthase L chain ATP-binding protein YP_004109242.1 3128686 R 652103 CDS YP_004109243.1 316934261 10065152 complement(3130715..3132319) 1 NC_014834.1 KEGG: nha:Nham_2125 propionyl-CoA carboxylase; PFAM: carboxyl transferase; methylcrotonoyl-CoA carboxylase 3132319 10065152 Rpdx1_2927 Rhodopseudomonas palustris DX-1 methylcrotonoyl-CoA carboxylase YP_004109243.1 3130715 R 652103 CDS YP_004109244.1 316934262 10065153 complement(3132514..3132819) 1 NC_014834.1 PFAM: ETC complex I subunit conserved region; KEGG: bra:BRADO3676 putative ETC complex I subunit region protein (fragment); ETC complex I subunit protein 3132819 10065153 Rpdx1_2928 Rhodopseudomonas palustris DX-1 ETC complex I subunit protein YP_004109244.1 3132514 R 652103 CDS YP_004109245.1 316934263 10065154 3133060..3134349 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: bja:bll4413 hypothetical protein; hypothetical protein 3134349 10065154 Rpdx1_2929 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109245.1 3133060 D 652103 CDS YP_004109246.1 316934264 10065155 complement(3134283..3135401) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: cja:CJA_0504 glycosyl transferase, putative, gt4E; glycosyl transferase group 1 protein 3135401 10065155 Rpdx1_2930 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004109246.1 3134283 R 652103 CDS YP_004109247.1 316934265 10065156 3135616..3136953 1 NC_014834.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mdi:METDI0840 putative phage integrase; integrase family protein 3136953 10065156 Rpdx1_2931 Rhodopseudomonas palustris DX-1 integrase family protein YP_004109247.1 3135616 D 652103 CDS YP_004109248.1 316934266 10065157 complement(3137306..3138316) 1 NC_014834.1 PFAM: integrase family protein; KEGG: azc:AZC_3570 putative phage HP1 integrase; integrase family protein 3138316 10065157 Rpdx1_2932 Rhodopseudomonas palustris DX-1 integrase family protein YP_004109248.1 3137306 R 652103 CDS YP_004109249.1 316934267 10065158 complement(3138313..3138720) 1 NC_014834.1 KEGG: met:M446_4953 MarR family transcriptional regulator; hypothetical protein 3138720 10065158 Rpdx1_2933 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109249.1 3138313 R 652103 CDS YP_004109250.1 316934268 10065159 complement(3138897..3139658) 1 NC_014834.1 manually curated; KEGG: mjl:Mjls_3915 stage II sporulation E family protein; hypothetical protein 3139658 10065159 Rpdx1_2934 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109250.1 3138897 R 652103 CDS YP_004109251.1 316934269 10065160 3140214..3141167 1 NC_014834.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein; Integrase catalytic subunit 3141167 10065160 Rpdx1_2935 Rhodopseudomonas palustris DX-1 Integrase catalytic subunit YP_004109251.1 3140214 D 652103 CDS YP_004109252.1 316934270 10065161 complement(3141332..3141529) 1 NC_014834.1 hypothetical protein 3141529 10065161 Rpdx1_2936 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109252.1 3141332 R 652103 CDS YP_004109253.1 316934271 10065162 complement(3141533..3142309) 1 NC_014834.1 KEGG: rba:RB1579 thermostable carboxypeptidase 1; hypothetical protein 3142309 10065162 Rpdx1_2937 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109253.1 3141533 R 652103 CDS YP_004109254.1 316934272 10065163 complement(3142359..3142748) 1 NC_014834.1 KEGG: rcu:RCOM_1585570 hypothetical protein; hypothetical protein 3142748 10065163 Rpdx1_2938 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109254.1 3142359 R 652103 CDS YP_004109255.1 316934273 10065164 complement(3142823..3143017) 1 NC_014834.1 KEGG: tai:Taci_1729 hypothetical protein; hypothetical protein 3143017 10065164 Rpdx1_2939 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109255.1 3142823 R 652103 CDS YP_004109256.1 316934274 10065165 complement(3143260..3143445) 1 NC_014834.1 KEGG: tgu:100226749 homeodomain protein; hypothetical protein 3143445 10065165 Rpdx1_2940 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109256.1 3143260 R 652103 CDS YP_004109257.1 316934275 10065166 3144158..3145087 1 NC_014834.1 PFAM: Tail Collar domain protein; KEGG: pap:PSPA7_5071 putative tail fiber protein; Tail Collar domain-containing protein 3145087 10065166 Rpdx1_2941 Rhodopseudomonas palustris DX-1 Tail Collar domain-containing protein YP_004109257.1 3144158 D 652103 CDS YP_004109258.1 316934276 10065167 3145322..3146929 1 NC_014834.1 KEGG: apb:SAR116_0382 hypothetical genomic island protein; hypothetical protein 3146929 10065167 Rpdx1_2942 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109258.1 3145322 D 652103 CDS YP_004109259.1 316934277 10065168 3147039..3147209 1 NC_014834.1 hypothetical protein 3147209 10065168 Rpdx1_2943 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109259.1 3147039 D 652103 CDS YP_004109260.1 316934278 10065169 3147292..3147531 1 NC_014834.1 KEGG: dre:567922 similar to LReO_3; hypothetical protein 3147531 10065169 Rpdx1_2944 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109260.1 3147292 D 652103 CDS YP_004109261.1 316934279 10065172 3149127..3150053 1 NC_014834.1 KEGG: rlt:Rleg2_1152 hypothetical protein; hypothetical protein 3150053 10065172 Rpdx1_2947 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109261.1 3149127 D 652103 CDS YP_004109262.1 316934280 10065173 3150060..3152564 1 NC_014834.1 KEGG: ote:Oter_1689 cell wall surface anchor family protein; hypothetical protein 3152564 10065173 Rpdx1_2948 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109262.1 3150060 D 652103 CDS YP_004109263.1 316934281 10065174 3152543..3153172 1 NC_014834.1 KEGG: cbc:CbuK_0677 valyl-tRNA synthetase; hypothetical protein 3153172 10065174 Rpdx1_2949 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109263.1 3152543 D 652103 CDS YP_004109264.1 316934282 10065175 3153138..3154736 1 NC_014834.1 KEGG: apb:SAR116_0377 hypothetical protein; hypothetical protein 3154736 10065175 Rpdx1_2950 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109264.1 3153138 D 652103 CDS YP_004109265.1 316934283 10065176 3154733..3156754 1 NC_014834.1 KEGG: apb:SAR116_0376 putative portal protein; putative portal protein 3156754 10065176 Rpdx1_2951 Rhodopseudomonas palustris DX-1 putative portal protein YP_004109265.1 3154733 D 652103 CDS YP_004109266.1 316934284 10065177 3156764..3157258 1 NC_014834.1 KEGG: gbr:Gbro_2152 translation initiation factor IF-2; hypothetical protein 3157258 10065177 Rpdx1_2952 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109266.1 3156764 D 652103 CDS YP_004109267.1 316934285 10065178 3157309..3157572 1 NC_014834.1 KEGG: pdi:BDI_0630 dihydroxyacetone kinase; hypothetical protein 3157572 10065178 Rpdx1_2953 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109267.1 3157309 D 652103 CDS YP_004109268.1 316934286 10065179 3157591..3158643 1 NC_014834.1 KEGG: apb:SAR116_0374 hypothetical protein; hypothetical protein 3158643 10065179 Rpdx1_2954 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109268.1 3157591 D 652103 CDS YP_004109269.1 316934287 10065180 3158670..3159584 1 NC_014834.1 KEGG: hth:HTH_0548 putative phage major head protein; putative phage major head protein 3159584 10065180 Rpdx1_2955 Rhodopseudomonas palustris DX-1 putative phage major head protein YP_004109269.1 3158670 D 652103 CDS YP_004109270.1 316934288 10065181 3159643..3159930 1 NC_014834.1 KEGG: apb:SAR116_0372 acriflavin resistance protein; acriflavin resistance protein 3159930 10065181 Rpdx1_2956 Rhodopseudomonas palustris DX-1 acriflavin resistance protein YP_004109270.1 3159643 D 652103 CDS YP_004109271.1 316934289 10065182 3159934..3160557 1 NC_014834.1 KEGG: apb:SAR116_0371 hypothetical protein; hypothetical protein 3160557 10065182 Rpdx1_2957 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109271.1 3159934 D 652103 CDS YP_004109272.1 316934290 10065183 3160558..3162237 1 NC_014834.1 KEGG: zro:ZYRO0F02728g hypothetical protein; hypothetical protein 3162237 10065183 Rpdx1_2958 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109272.1 3160558 D 652103 CDS YP_004109273.1 316934291 10065184 3162234..3162653 1 NC_014834.1 KEGG: bav:BAV1476 phage protein; hypothetical protein 3162653 10065184 Rpdx1_2959 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109273.1 3162234 D 652103 CDS YP_004109274.1 316934292 10065185 3162880..3163509 1 NC_014834.1 PFAM: glycoside hydrolase family 24; KEGG: mag:amb1525 phage-related lysozyme; glycoside hydrolase family protein 3163509 10065185 Rpdx1_2960 Rhodopseudomonas palustris DX-1 glycoside hydrolase family protein YP_004109274.1 3162880 D 652103 CDS YP_004109275.1 316934293 10065186 3163509..3163898 1 NC_014834.1 KEGG: chl:Chy400_0986 hypothetical protein; hypothetical protein 3163898 10065186 Rpdx1_2961 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109275.1 3163509 D 652103 CDS YP_004109276.1 316934294 10065187 3163867..3164106 1 NC_014834.1 KEGG: xau:Xaut_4507 hypothetical protein; hypothetical protein 3164106 10065187 Rpdx1_2962 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109276.1 3163867 D 652103 CDS YP_004109277.1 316934295 10065188 3164282..3164521 1 NC_014834.1 KEGG: sps:SPs1725 M protein type 3; M protein type 3 3164521 10065188 Rpdx1_2963 Rhodopseudomonas palustris DX-1 M protein type 3 YP_004109277.1 3164282 D 652103 CDS YP_004109278.1 316934296 10065189 complement(3164577..3164813) 1 NC_014834.1 manually curated; KEGG: rme:Rmet_2265 hypothetical protein; hypothetical protein 3164813 10065189 Rpdx1_2964 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109278.1 3164577 R 652103 CDS YP_004109279.1 316934297 10065190 complement(3164886..3165143) 1 NC_014834.1 KEGG: sbi:SORBI_06g026970 hypothetical protein; hypothetical protein 3165143 10065190 Rpdx1_2965 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109279.1 3164886 R 652103 CDS YP_004109280.1 316934298 10065191 complement(3165143..3165298) 1 NC_014834.1 hypothetical protein 3165298 10065191 Rpdx1_2966 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109280.1 3165143 R 652103 CDS YP_004109281.1 316934299 10065192 complement(3165298..3165453) 1 NC_014834.1 hypothetical protein 3165453 10065192 Rpdx1_2967 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109281.1 3165298 R 652103 CDS YP_004109282.1 316934300 10065193 complement(3165453..3165914) 1 NC_014834.1 PFAM: 20S proteasome A and B subunits; KEGG: ppg:PputGB1_3423 20S proteasome A and B subunits; 20S proteasome subunits A/B 3165914 10065193 Rpdx1_2968 Rhodopseudomonas palustris DX-1 20S proteasome subunits A/B YP_004109282.1 3165453 R 652103 CDS YP_004109283.1 316934301 10065194 complement(3165892..3166527) 1 NC_014834.1 KEGG: smt:Smal_0900 hypothetical protein; hypothetical protein 3166527 10065194 Rpdx1_2969 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109283.1 3165892 R 652103 CDS YP_004109284.1 316934302 10065195 complement(3166524..3166715) 1 NC_014834.1 hypothetical protein 3166715 10065195 Rpdx1_2970 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109284.1 3166524 R 652103 CDS YP_004109285.1 316934303 10065196 complement(3166708..3167310) 1 NC_014834.1 KEGG: ppu:PP_2272 hypothetical protein; hypothetical protein 3167310 10065196 Rpdx1_2971 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109285.1 3166708 R 652103 CDS YP_004109286.1 316934304 10065197 complement(3167318..3167470) 1 NC_014834.1 hypothetical protein 3167470 10065197 Rpdx1_2972 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109286.1 3167318 R 652103 CDS YP_004109287.1 316934305 10065198 complement(3167467..3167640) 1 NC_014834.1 KEGG: bpl:BURPS1106A_2403 hypothetical protein; hypothetical protein 3167640 10065198 Rpdx1_2973 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109287.1 3167467 R 652103 CDS YP_004109288.1 316934306 10065199 complement(3167658..3167963) 1 NC_014834.1 KEGG: ttj:TTHA1835 NADH oxidase; hypothetical protein 3167963 10065199 Rpdx1_2974 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109288.1 3167658 R 652103 CDS YP_004109289.1 316934307 10065200 complement(3167939..3168655) 1 NC_014834.1 KEGG: apb:SAR116_0390 putative phage exonuclease; PFAM: 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease 3168655 10065200 Rpdx1_2975 Rhodopseudomonas palustris DX-1 5'-3' exonuclease YP_004109289.1 3167939 R 652103 CDS YP_004109290.1 316934308 10065201 complement(3168712..3168804) 1 NC_014834.1 hypothetical protein 3168804 10065201 Rpdx1_2976 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109290.1 3168712 R 652103 CDS YP_004109291.1 316934309 10065202 complement(3168950..3169147) 1 NC_014834.1 KEGG: dar:Daro_0434 hypothetical protein; hypothetical protein 3169147 10065202 Rpdx1_2977 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109291.1 3168950 R 652103 CDS YP_004109292.1 316934310 10065203 complement(3169352..3171436) 1 NC_014834.1 KEGG: ppu:PP_2273 DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; DNA-directed DNA polymerase 3171436 10065203 Rpdx1_2978 Rhodopseudomonas palustris DX-1 DNA-directed DNA polymerase YP_004109292.1 3169352 R 652103 CDS YP_004109293.1 316934311 10065204 complement(3171645..3171815) 1 NC_014834.1 hypothetical protein 3171815 10065204 Rpdx1_2979 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109293.1 3171645 R 652103 CDS YP_004109294.1 316934312 10065205 complement(3171815..3171994) 1 NC_014834.1 hypothetical protein 3171994 10065205 Rpdx1_2980 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109294.1 3171815 R 652103 CDS YP_004109295.1 316934313 10065206 complement(3171991..3172491) 1 NC_014834.1 KEGG: ppp:PHYPADRAFT_231479 hypothetical protein; hypothetical protein 3172491 10065206 Rpdx1_2981 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109295.1 3171991 R 652103 CDS YP_004109296.1 316934314 10065207 complement(3172458..3174083) 1 NC_014834.1 KEGG: azc:AZC_3598 DNA primase; DNA primase 3174083 10065207 Rpdx1_2982 Rhodopseudomonas palustris DX-1 DNA primase YP_004109296.1 3172458 R 652103 CDS YP_004109297.1 316934315 10065208 complement(3174067..3174555) 1 NC_014834.1 manually curated; KEGG: xce:Xcel_0567 hypothetical protein; hypothetical protein 3174555 10065208 Rpdx1_2983 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109297.1 3174067 R 652103 CDS YP_004109298.1 316934316 10065209 complement(3174548..3174655) 1 NC_014834.1 hypothetical protein 3174655 10065209 Rpdx1_2984 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109298.1 3174548 R 652103 CDS YP_004109299.1 316934317 10065210 complement(3174736..3174975) 1 NC_014834.1 KEGG: azc:AZC_3600 hypothetical protein; hypothetical protein 3174975 10065210 Rpdx1_2985 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109299.1 3174736 R 652103 CDS YP_004109300.1 316934318 10065211 complement(3174978..3175799) 1 NC_014834.1 PFAM: pentapeptide repeat protein; KEGG: cyn:Cyan7425_5254 pentapeptide repeat protein; pentapeptide repeat-containing protein 3175799 10065211 Rpdx1_2986 Rhodopseudomonas palustris DX-1 pentapeptide repeat-containing protein YP_004109300.1 3174978 R 652103 CDS YP_004109301.1 316934319 10065212 complement(3175913..3176161) 1 NC_014834.1 KEGG: scl:sce6798 anti-anti sigma factor protein; hypothetical protein 3176161 10065212 Rpdx1_2987 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109301.1 3175913 R 652103 CDS YP_004109302.1 316934320 10065213 complement(3176171..3176611) 1 NC_014834.1 PFAM: endonuclease I; KEGG: ppu:PP_2268 phage endodeoxyribonuclease I; endonuclease I 3176611 10065213 Rpdx1_2988 Rhodopseudomonas palustris DX-1 endonuclease I YP_004109302.1 3176171 R 652103 CDS YP_004109303.1 316934321 10065214 complement(3176611..3177192) 1 NC_014834.1 KEGG: apb:SAR116_0394 possible DNA-dependent RNA polymerase; hypothetical protein 3177192 10065214 Rpdx1_2989 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109303.1 3176611 R 652103 CDS YP_004109304.1 316934322 10065215 complement(3177316..3177792) 1 NC_014834.1 KEGG: sbi:SORBI_03g027965 hypothetical protein; hypothetical protein 3177792 10065215 Rpdx1_2990 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109304.1 3177316 R 652103 CDS YP_004109305.1 316934323 10065216 complement(3177789..3177935) 1 NC_014834.1 hypothetical protein 3177935 10065216 Rpdx1_2991 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109305.1 3177789 R 652103 CDS YP_004109306.1 316934324 10065217 complement(3178319..3180847) 1 NC_014834.1 KEGG: ppu:PP_2266 DNA-directed RNA polymerase, bacteriophage and mitochondrial type; PFAM: DNA-directed RNA polymerase bacteriophage type; DNA-directed RNA polymerase 3180847 10065217 Rpdx1_2992 Rhodopseudomonas palustris DX-1 DNA-directed RNA polymerase YP_004109306.1 3178319 R 652103 CDS YP_004109307.1 316934325 10065219 complement(3181261..3181746) 1 NC_014834.1 PFAM: protein of unknown function DUF192; KEGG: bja:blr4411 hypothetical protein; hypothetical protein 3181746 10065219 Rpdx1_2993 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109307.1 3181261 R 652103 CDS YP_004109308.1 316934326 10065220 complement(3181925..3182620) 1 NC_014834.1 KEGG: bja:blr4410 cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 3182620 10065220 Rpdx1_2994 Rhodopseudomonas palustris DX-1 cold-shock DNA-binding domain-containing protein YP_004109308.1 3181925 R 652103 CDS YP_004109309.1 316934327 10065221 complement(3182822..3183583) 1 NC_014834.1 PFAM: Silent information regulator protein Sir2; KEGG: bja:blr4409 hypothetical protein; silent information regulator protein Sir2 3183583 10065221 Rpdx1_2995 Rhodopseudomonas palustris DX-1 silent information regulator protein Sir2 YP_004109309.1 3182822 R 652103 CDS YP_004109310.1 316934328 10065222 3184043..3184492 1 NC_014834.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nha:Nham_2145 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3184492 10065222 Rpdx1_2996 Rhodopseudomonas palustris DX-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_004109310.1 3184043 D 652103 CDS YP_004109311.1 316934329 10065223 complement(3184773..3185030) 1 NC_014834.1 PFAM: type IV pilus assembly PilZ; KEGG: bra:BRADO3661 hypothetical protein; type IV pilus assembly PilZ 3185030 10065223 Rpdx1_2997 Rhodopseudomonas palustris DX-1 type IV pilus assembly PilZ YP_004109311.1 3184773 R 652103 CDS YP_004109312.1 316934330 10065225 complement(3185427..3185651) 1 NC_014834.1 KEGG: cac:CAC0259 fusion NifN/K+nifB (NifN-nitrogenase iron molybdenum cofactor biosinthesis protein, NifK-nitrogenase molibdenum-iron protein beta chain, NifB-nitrogenase iron-molibdenum cofactor biosynthesis protein); hypothetical protein 3185651 10065225 Rpdx1_2998 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109312.1 3185427 R 652103 CDS YP_004109313.1 316934331 10065226 3186166..3186756 1 NC_014834.1 KEGG: nha:Nham_2298 hypothetical protein; hypothetical protein 3186756 10065226 Rpdx1_2999 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109313.1 3186166 D 652103 CDS YP_004109314.1 316934332 10065227 complement(3186796..3187056) 1 NC_014834.1 KEGG: nha:Nham_2299 hypothetical protein; hypothetical protein 3187056 10065227 Rpdx1_3000 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109314.1 3186796 R 652103 CDS YP_004109315.1 316934333 10065228 complement(3187214..3188305) 1 NC_014834.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: nha:Nham_2300 hypothetical protein; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 3188305 10065228 Rpdx1_3001 Rhodopseudomonas palustris DX-1 lysine 2,3-aminomutase YodO family protein YP_004109315.1 3187214 R 652103 CDS YP_004109316.1 316934334 10065229 complement(3188302..3189396) 1 NC_014834.1 KEGG: bbt:BBta_4013 putative lysyl-tRNA synthetase (lysine--tRNA ligase); TIGRFAM: lysyl-tRNA synthetase-related protein GenX; PFAM: tRNA synthetase class II (D K and N); lysyl-tRNA synthetase-like protein GenX 3189396 10065229 Rpdx1_3002 Rhodopseudomonas palustris DX-1 lysyl-tRNA synthetase-like protein GenX YP_004109316.1 3188302 R 652103 CDS YP_004109317.1 316934335 10065230 3189495..3190061 1 NC_014834.1 KEGG: nwi:Nwi_1643 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor P/YeiP protein; Elongation factor KOW domain protein; translation elongation factor P 3190061 10065230 Rpdx1_3003 Rhodopseudomonas palustris DX-1 translation elongation factor P YP_004109317.1 3189495 D 652103 CDS YP_004109318.1 316934336 10065231 complement(3190140..3191120) 1 NC_014834.1 KEGG: bbt:BBta_5358 putative lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic subunit 3191120 10065231 Rpdx1_3004 Rhodopseudomonas palustris DX-1 diacylglycerol kinase catalytic subunit YP_004109318.1 3190140 R 652103 CDS YP_004109319.1 316934337 10065232 3191336..3192565 1 NC_014834.1 KEGG: bbt:BBta_4006 putative membrane-bound lytic transglycosylase precursor protein, putative signal peptide; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; lytic murein transglycosylase 3192565 10065232 Rpdx1_3005 Rhodopseudomonas palustris DX-1 lytic murein transglycosylase YP_004109319.1 3191336 D 652103 CDS YP_004109320.1 316934338 10065233 3192583..3193701 1 NC_014834.1 KEGG: dar:Daro_1033 hypothetical protein; hypothetical protein 3193701 10065233 Rpdx1_3006 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109320.1 3192583 D 652103 CDS YP_004109321.1 316934339 10065234 3193785..3194075 1 NC_014834.1 KEGG: sme:SMc00611 hypothetical protein; hypothetical protein 3194075 10065234 Rpdx1_3007 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109321.1 3193785 D 652103 CDS YP_004109322.1 316934340 10065235 complement(3194233..3196074) 1 NC_014834.1 KEGG: bbt:BBta_4000 exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; single-stranded-DNA-specific exonuclease RecJ 3196074 10065235 Rpdx1_3008 Rhodopseudomonas palustris DX-1 single-stranded-DNA-specific exonuclease RecJ YP_004109322.1 3194233 R 652103 CDS YP_004109323.1 316934341 10065236 complement(3196289..3197017) 1 NC_014834.1 KEGG: bja:blr4364 putative haloacid dehalogenase; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase 3197017 10065236 Rpdx1_3009 Rhodopseudomonas palustris DX-1 haloacid dehalogenase YP_004109323.1 3196289 R 652103 CDS YP_004109324.1 316934342 10065237 complement(3197195..3197638) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mno:Mnod_3262 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3197638 10065237 Rpdx1_3010 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004109324.1 3197195 R 652103 CDS YP_004109325.1 316934343 10065238 complement(3197651..3198655) 1 NC_014834.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: oca:OCAR_6017 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein; fructose-1,6-bisphosphatase 3198655 10065238 Rpdx1_3011 Rhodopseudomonas palustris DX-1 fructose-1,6-bisphosphatase YP_004109325.1 3197651 R 652103 CDS YP_004109326.1 316934344 10065239 complement(3198718..3200043) 1 NC_014834.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; KEGG: bbt:BBta_3996 homoserine dehydrogenase; homoserine dehydrogenase 3200043 10065239 Rpdx1_3012 Rhodopseudomonas palustris DX-1 homoserine dehydrogenase YP_004109326.1 3198718 R 652103 CDS YP_004109327.1 316934345 10065240 complement(3200121..3201341) 1 NC_014834.1 PFAM: aminotransferase class I and II; KEGG: bra:BRADO3571 aminotransferase; class I/II aminotransferase 3201341 10065240 Rpdx1_3013 Rhodopseudomonas palustris DX-1 class I/II aminotransferase YP_004109327.1 3200121 R 652103 CDS YP_004109328.1 316934346 10065241 complement(3201526..3201834) 1 NC_014834.1 KEGG: nha:Nham_2311 hypothetical protein; hypothetical protein 3201834 10065241 Rpdx1_3014 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109328.1 3201526 R 652103 CDS YP_004109329.1 316934347 10065242 3202162..3203967 1 NC_014834.1 KEGG: bra:BRADO3568 poly-beta-hydroxybutyrate polymerase; TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; poly(R)-hydroxyalkanoic acid synthase 3203967 10065242 Rpdx1_3015 Rhodopseudomonas palustris DX-1 poly(R)-hydroxyalkanoic acid synthase YP_004109329.1 3202162 D 652103 CDS YP_004109330.1 316934348 10065243 complement(3204009..3205286) 1 NC_014834.1 PFAM: Amidase; KEGG: bra:BRADO0324 putative amidase (AmiD); amidase 3205286 10065243 Rpdx1_3016 Rhodopseudomonas palustris DX-1 amidase YP_004109330.1 3204009 R 652103 CDS YP_004109331.1 316934349 10065244 complement(3205356..3206333) 1 NC_014834.1 KEGG: pnu:Pnuc_1180 putative ABC transporter, periplasmic protein; putative ABC transporter periplasmic protein 3206333 10065244 Rpdx1_3017 Rhodopseudomonas palustris DX-1 putative ABC transporter periplasmic protein YP_004109331.1 3205356 R 652103 CDS YP_004109332.1 316934350 10065245 complement(3206390..3207268) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pnu:Pnuc_1181 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 3207268 10065245 Rpdx1_3018 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004109332.1 3206390 R 652103 CDS YP_004109333.1 316934351 10065246 complement(3207268..3208056) 1 NC_014834.1 KEGG: pnu:Pnuc_1182 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3208056 10065246 Rpdx1_3019 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109333.1 3207268 R 652103 CDS YP_004109334.1 316934352 10065247 3208357..3209055 1 NC_014834.1 KEGG: bph:Bphy_6303 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3209055 10065247 Rpdx1_3020 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004109334.1 3208357 D 652103 CDS YP_004109335.1 316934353 10065248 complement(3209093..3209455) 1 NC_014834.1 KEGG: nha:Nham_2503 hypothetical protein; hypothetical protein 3209455 10065248 Rpdx1_3021 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109335.1 3209093 R 652103 CDS YP_004109336.1 316934354 10065249 complement(3209703..3211499) 1 NC_014834.1 KEGG: azc:AZC_3721 elongator protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 3211499 10065249 Rpdx1_3022 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004109336.1 3209703 R 652103 CDS YP_004109337.1 316934355 10065250 complement(3211754..3212353) 1 NC_014834.1 PFAM: Methyltransferase type 12; KEGG: atc:AGR_C_4253 hypothetical protein; type 12 methyltransferase 3212353 10065250 Rpdx1_3023 Rhodopseudomonas palustris DX-1 type 12 methyltransferase YP_004109337.1 3211754 R 652103 CDS YP_004109338.1 316934356 10065251 complement(3212419..3213414) 1 NC_014834.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: nha:Nham_2314 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; N-acetyl-gamma-glutamyl-phosphate reductase 3213414 10065251 Rpdx1_3024 Rhodopseudomonas palustris DX-1 N-acetyl-gamma-glutamyl-phosphate reductase YP_004109338.1 3212419 R 652103 CDS YP_004109339.1 316934357 10065252 complement(3213429..3214094) 1 NC_014834.1 PFAM: Negative transcriptional regulator; KEGG: bbt:BBta_3982 negative transcriptional regulator; FMN-binding negative transcriptional regulator 3214094 10065252 Rpdx1_3025 Rhodopseudomonas palustris DX-1 FMN-binding negative transcriptional regulator YP_004109339.1 3213429 R 652103 CDS YP_004109340.1 316934358 10065253 3214543..3215088 1 NC_014834.1 PFAM: Protein of unknown function DUF2087; KEGG: bid:Bind_2948 hypothetical protein; hypothetical protein 3215088 10065253 Rpdx1_3026 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109340.1 3214543 D 652103 CDS YP_004109341.1 316934359 10065254 3215121..3216026 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: gau:GAU_0062 putative hydrolase; alpha/beta hydrolase fold protein 3216026 10065254 Rpdx1_3027 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004109341.1 3215121 D 652103 CDS YP_004109342.1 316934360 10065255 complement(3216030..3217019) 1 NC_014834.1 KEGG: bra:BRADO4092 putative metallo-beta-lactamase family protein; putative metallo-beta-lactamase family protein 3217019 10065255 Rpdx1_3028 Rhodopseudomonas palustris DX-1 putative metallo-beta-lactamase family protein YP_004109342.1 3216030 R 652103 CDS YP_004109343.1 316934361 10065256 complement(3217109..3217636) 1 NC_014834.1 PFAM: SNARE associated Golgi protein; KEGG: bbt:BBta_3981 hypothetical protein; hypothetical protein 3217636 10065256 Rpdx1_3029 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109343.1 3217109 R 652103 CDS YP_004109344.1 316934362 10065257 3218092..3220140 1 NC_014834.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: nwi:Nwi_1653 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; DNA topoisomerase IV subunit B 3220140 10065257 Rpdx1_3030 Rhodopseudomonas palustris DX-1 DNA topoisomerase IV subunit B YP_004109344.1 3218092 D 652103 CDS YP_004109345.1 316934363 10065258 3220266..3220469 1 NC_014834.1 KEGG: nha:Nham_2319 hypothetical protein; hypothetical protein 3220469 10065258 Rpdx1_3031 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109345.1 3220266 D 652103 CDS YP_004109346.1 316934364 10065259 3220488..3221924 1 NC_014834.1 KEGG: rru:Rru_A0400 hypothetical protein; hypothetical protein 3221924 10065259 Rpdx1_3032 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109346.1 3220488 D 652103 CDS YP_004109347.1 316934365 10065260 complement(3221952..3223466) 1 NC_014834.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bbt:BBta_3976 hypothetical protein; peptidase C14 caspase catalytic subunit p20 3223466 10065260 Rpdx1_3033 Rhodopseudomonas palustris DX-1 peptidase C14 caspase catalytic subunit p20 YP_004109347.1 3221952 R 652103 CDS YP_004109348.1 316934366 10065261 complement(3223642..3225327) 1 NC_014834.1 KEGG: bra:BRADO2559 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3225327 10065261 Rpdx1_3034 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004109348.1 3223642 R 652103 CDS YP_004109349.1 316934367 10065262 3225654..3226670 1 NC_014834.1 KEGG: bja:blr7666 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3226670 10065262 Rpdx1_3035 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004109349.1 3225654 D 652103 CDS YP_004109350.1 316934368 10065263 3226945..3228354 1 NC_014834.1 KEGG: bja:bll4348 ATP-dependent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 3228354 10065263 Rpdx1_3036 Rhodopseudomonas palustris DX-1 DEAD/DEAH box helicase YP_004109350.1 3226945 D 652103 CDS YP_004109351.1 316934369 10065264 3228460..3229527 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bja:bll4347 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3229527 10065264 Rpdx1_3037 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004109351.1 3228460 D 652103 CDS YP_004109352.1 316934370 10065265 complement(3229532..3230035) 1 NC_014834.1 PFAM: TfoX domain protein; KEGG: bra:BRADO3547 hypothetical protein; TfoX domain-containing protein 3230035 10065265 Rpdx1_3038 Rhodopseudomonas palustris DX-1 TfoX domain-containing protein YP_004109352.1 3229532 R 652103 CDS YP_004109353.1 316934371 10065266 complement(3230118..3230594) 1 NC_014834.1 PFAM: Endoribonuclease L-PSP; KEGG: tmz:Tmz1t_0821 endoribonuclease L-PSP; endoribonuclease L-PSP 3230594 10065266 Rpdx1_3039 Rhodopseudomonas palustris DX-1 endoribonuclease L-PSP YP_004109353.1 3230118 R 652103 CDS YP_004109354.1 316934372 10065267 complement(3230591..3231694) 1 NC_014834.1 KEGG: scb:SCAB_78071 hypothetical protein; hypothetical protein 3231694 10065267 Rpdx1_3040 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109354.1 3230591 R 652103 CDS YP_004109355.1 316934373 10065268 complement(3231700..3233664) 1 NC_014834.1 KEGG: hch:HCH_03141 hypothetical protein; hypothetical protein 3233664 10065268 Rpdx1_3041 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109355.1 3231700 R 652103 CDS YP_004109356.1 316934374 10065269 complement(3233819..3234190) 1 NC_014834.1 KEGG: nwi:Nwi_1659 HesB/YadR/YfhF; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein 3234190 10065269 Rpdx1_3042 Rhodopseudomonas palustris DX-1 iron-sulfur cluster assembly accessory protein YP_004109356.1 3233819 R 652103 CDS YP_004109357.1 316934375 10065270 complement(3234320..3234736) 1 NC_014834.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: csa:Csal_3007 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3234736 10065270 Rpdx1_3043 Rhodopseudomonas palustris DX-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_004109357.1 3234320 R 652103 CDS YP_004109358.1 316934376 10065271 complement(3234744..3235112) 1 NC_014834.1 KEGG: bja:blr4343 hypothetical protein; TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; FeS assembly SUF system protein 3235112 10065271 Rpdx1_3044 Rhodopseudomonas palustris DX-1 FeS assembly SUF system protein YP_004109358.1 3234744 R 652103 CDS YP_004109359.1 316934377 10065272 complement(3235109..3236356) 1 NC_014834.1 KEGG: bbt:BBta_3969 cysteine desulfurase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; cysteine desulfurase 3236356 10065272 Rpdx1_3045 Rhodopseudomonas palustris DX-1 cysteine desulfurase YP_004109359.1 3235109 R 652103 CDS YP_004109360.1 316934378 10065273 complement(3236353..3237666) 1 NC_014834.1 KEGG: bra:BRADO3543 SufD, needed for FhuF Fe-S center production/stability; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; FeS assembly protein SufD 3237666 10065273 Rpdx1_3046 Rhodopseudomonas palustris DX-1 FeS assembly protein SufD YP_004109360.1 3236353 R 652103 CDS YP_004109361.1 316934379 10065274 complement(3237690..3238448) 1 NC_014834.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: bra:BRADO3542 SufC, related to ABC transporter associated with Fe-S cluster assembly ATP-binding protein; SMART: AAA ATPase; FeS assembly ATPase SufC 3238448 10065274 Rpdx1_3047 Rhodopseudomonas palustris DX-1 FeS assembly ATPase SufC YP_004109361.1 3237690 R 652103 CDS YP_004109362.1 316934380 10065275 complement(3238583..3240079) 1 NC_014834.1 KEGG: bra:BRADO3540 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; FeS assembly protein SufB 3240079 10065275 Rpdx1_3048 Rhodopseudomonas palustris DX-1 FeS assembly protein SufB YP_004109362.1 3238583 R 652103 CDS YP_004109363.1 316934381 10065276 complement(3240163..3241335) 1 NC_014834.1 KEGG: bja:blr4338 cysteine desulfurase; PFAM: aminotransferase class V; cysteine desulfurase 3241335 10065276 Rpdx1_3049 Rhodopseudomonas palustris DX-1 cysteine desulfurase YP_004109363.1 3240163 R 652103 CDS YP_004109364.1 316934382 10065277 3241572..3242219 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: nwi:Nwi_1666 hypothetical protein; alpha/beta hydrolase fold protein 3242219 10065277 Rpdx1_3050 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004109364.1 3241572 D 652103 CDS YP_004109365.1 316934383 10065278 complement(3242239..3243342) 1 NC_014834.1 PFAM: protein of unknown function UPF0075; KEGG: nha:Nham_2331 anhydro-N-acetylmuramic acid kinase; hypothetical protein 3243342 10065278 Rpdx1_3051 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109365.1 3242239 R 652103 CDS YP_004109366.1 316934384 10065279 3243500..3244756 1 NC_014834.1 TIGRFAM: tyrosyl-tRNA synthetase; KEGG: nwi:Nwi_1668 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tyrosyl-tRNA synthetase 3244756 10065279 Rpdx1_3052 Rhodopseudomonas palustris DX-1 tyrosyl-tRNA synthetase YP_004109366.1 3243500 D 652103 CDS YP_004109367.1 316934385 10065280 3244841..3246058 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3959 hypothetical protein; major facilitator superfamily protein 3246058 10065280 Rpdx1_3053 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004109367.1 3244841 D 652103 CDS YP_004109368.1 316934386 10065281 3246282..3246845 1 NC_014834.1 KEGG: reh:H16_A3123 cytochrome b561; cytochrome b561 3246845 10065281 Rpdx1_3054 Rhodopseudomonas palustris DX-1 cytochrome b561 YP_004109368.1 3246282 D 652103 CDS YP_004109369.1 316934387 10065282 complement(3246883..3250602) 1 NC_014834.1 KEGG: nha:Nham_2333 hypothetical protein; hypothetical protein 3250602 10065282 Rpdx1_3055 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109369.1 3246883 R 652103 CDS YP_004109370.1 316934388 10065283 3250794..3251402 1 NC_014834.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: bra:BRADO3529 hypothetical protein; alkyl hydroperoxide reductase 3251402 10065283 Rpdx1_3056 Rhodopseudomonas palustris DX-1 alkyl hydroperoxide reductase YP_004109370.1 3250794 D 652103 CDS YP_004109371.1 316934389 10065284 3251496..3252866 1 NC_014834.1 PFAM: Peptidase M23; KEGG: bbt:BBta_3955 putative metalloendopeptidase; peptidase M23 3252866 10065284 Rpdx1_3057 Rhodopseudomonas palustris DX-1 peptidase M23 YP_004109371.1 3251496 D 652103 CDS YP_004109372.1 316934390 10065285 complement(join(3253016..3254077,3254079..3254147)) 1 NC_014834.1 manually curated; TIGRFAM: peptide chain release factor 2; KEGG: bpm:BURPS1710b_3602 hypothetical protein; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 2 3254147 10065285 Rpdx1_3058 Rhodopseudomonas palustris DX-1 peptide chain release factor 2 YP_004109372.1 3253016 R 652103 CDS YP_004109373.1 316934391 10065286 complement(3254258..3256768) 1 NC_014834.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: nha:Nham_1824 penicillin-binding protein 1A; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 3256768 10065286 Rpdx1_3059 Rhodopseudomonas palustris DX-1 penicillin-binding protein YP_004109373.1 3254258 R 652103 CDS YP_004109374.1 316934392 10065287 complement(3256960..3258270) 1 NC_014834.1 manually curated; PFAM: cell wall hydrolase/autolysin; KEGG: bja:blr4306 putative N-acetylmuramoyl-L-alanine amidase precursor; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 3258270 10065287 Rpdx1_3060 Rhodopseudomonas palustris DX-1 cell wall hydrolase/autolysin YP_004109374.1 3256960 R 652103 CDS YP_004109375.1 316934393 10065288 3258970..3262131 1 NC_014834.1 KEGG: bja:bll4305 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; ribonuclease, Rne/Rng family 3262131 10065288 Rpdx1_3061 Rhodopseudomonas palustris DX-1 ribonuclease, Rne/Rng family YP_004109375.1 3258970 D 652103 CDS YP_004109376.1 316934394 10065289 complement(3262439..3263776) 1 NC_014834.1 PFAM: sodium:dicarboxylate symporter; KEGG: bra:BRADO3510 C4-dicarboxylate transport protein; sodium:dicarboxylate symporter 3263776 10065289 Rpdx1_3062 Rhodopseudomonas palustris DX-1 sodium:dicarboxylate symporter YP_004109376.1 3262439 R 652103 CDS YP_004109377.1 316934395 10065290 complement(3263873..3264490) 1 NC_014834.1 PFAM: BioY protein; KEGG: bja:blr4297 hypothetical protein; BioY protein 3264490 10065290 Rpdx1_3063 Rhodopseudomonas palustris DX-1 BioY protein YP_004109377.1 3263873 R 652103 CDS YP_004109378.1 316934396 10065291 complement(3264589..3265779) 1 NC_014834.1 PFAM: aminotransferase class I and II; KEGG: nha:Nham_2183 aminotransferase, class I and II; class I/II aminotransferase 3265779 10065291 Rpdx1_3064 Rhodopseudomonas palustris DX-1 class I/II aminotransferase YP_004109378.1 3264589 R 652103 CDS YP_004109379.1 316934397 10065292 3265888..3267315 1 NC_014834.1 PFAM: peptidase M48 Ste24p; KEGG: bja:bll4295 hypothetical protein; peptidase M48 Ste24p 3267315 10065292 Rpdx1_3065 Rhodopseudomonas palustris DX-1 peptidase M48 Ste24p YP_004109379.1 3265888 D 652103 CDS YP_004109380.1 316934398 10065293 3267501..3267896 1 NC_014834.1 PFAM: BA14K family protein; KEGG: nha:Nham_0272 hypothetical protein; BA14K family protein 3267896 10065293 Rpdx1_3066 Rhodopseudomonas palustris DX-1 BA14K family protein YP_004109380.1 3267501 D 652103 CDS YP_004109381.1 316934399 10065294 3268094..3268723 1 NC_014834.1 KEGG: maq:Maqu_0381 peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; peroxidase 3268723 10065294 Rpdx1_3067 Rhodopseudomonas palustris DX-1 peroxidase YP_004109381.1 3268094 D 652103 CDS YP_004109382.1 316934400 10065295 3268912..3269679 1 NC_014834.1 PFAM: DSBA oxidoreductase; KEGG: nwi:Nwi_1750 DsbA oxidoreductase; DSBA oxidoreductase 3269679 10065295 Rpdx1_3068 Rhodopseudomonas palustris DX-1 DSBA oxidoreductase YP_004109382.1 3268912 D 652103 CDS YP_004109383.1 316934401 10065296 complement(3269782..3270468) 1 NC_014834.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: bac:BamMC406_0585 TetR family transcriptional regulator; regulatory protein TetR 3270468 10065296 Rpdx1_3069 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004109383.1 3269782 R 652103 CDS YP_004109384.1 316934402 10065297 complement(3270465..3271418) 1 NC_014834.1 PFAM: cation efflux protein; KEGG: ppw:PputW619_3985 cation efflux protein; cation efflux protein 3271418 10065297 Rpdx1_3070 Rhodopseudomonas palustris DX-1 cation efflux protein YP_004109384.1 3270465 R 652103 CDS YP_004109385.1 316934403 10065298 complement(3271760..3271972) 1 NC_014834.1 KEGG: bbt:BBta_3130 hypothetical protein; hypothetical protein 3271972 10065298 Rpdx1_3071 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109385.1 3271760 R 652103 CDS YP_004109386.1 316934404 10065299 3272493..3272948 1 NC_014834.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: nha:Nham_2187 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; 3-dehydroquinate dehydratase 3272948 10065299 Rpdx1_3072 Rhodopseudomonas palustris DX-1 3-dehydroquinate dehydratase YP_004109386.1 3272493 D 652103 CDS YP_004109387.1 316934405 10065300 3272991..3273491 1 NC_014834.1 KEGG: bbt:BBta_4215 biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 3273491 10065300 Rpdx1_3073 Rhodopseudomonas palustris DX-1 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004109387.1 3272991 D 652103 CDS YP_004109388.1 316934406 10065301 3273601..3274953 1 NC_014834.1 KEGG: bbt:BBta_4216 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; acetyl-CoA carboxylase, biotin carboxylase 3274953 10065301 Rpdx1_3074 Rhodopseudomonas palustris DX-1 acetyl-CoA carboxylase, biotin carboxylase YP_004109388.1 3273601 D 652103 CDS YP_004109389.1 316934407 10065302 3275137..3276669 1 NC_014834.1 KEGG: bra:BRADO3499 putative two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; multi-sensor signal transduction histidine kinase 3276669 10065302 Rpdx1_3075 Rhodopseudomonas palustris DX-1 multi-sensor signal transduction histidine kinase YP_004109389.1 3275137 D 652103 CDS YP_004109390.1 316934408 10065303 3276666..3277109 1 NC_014834.1 KEGG: bbt:BBta_4218 putative two-component response regulator/receiver (CheY-like protein); PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 3277109 10065303 Rpdx1_3076 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004109390.1 3276666 D 652103 CDS YP_004109391.1 316934409 10065304 3277106..3278194 1 NC_014834.1 KEGG: nha:Nham_2192 signal transduction histidine kinase; PFAM: histidine kinase dimerisation/phosphoacceptor; response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; signal transduction histidine kinase 3278194 10065304 Rpdx1_3077 Rhodopseudomonas palustris DX-1 signal transduction histidine kinase YP_004109391.1 3277106 D 652103 CDS YP_004109392.1 316934410 10065305 3278238..3278909 1 NC_014834.1 KEGG: rlt:Rleg2_5786 hypothetical protein; hypothetical protein 3278909 10065305 Rpdx1_3078 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109392.1 3278238 D 652103 CDS YP_004109393.1 316934411 10065306 3279150..3280367 1 NC_014834.1 KEGG: nha:Nham_3404 hypothetical protein; hypothetical protein 3280367 10065306 Rpdx1_3079 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109393.1 3279150 D 652103 CDS YP_004109394.1 316934412 10065307 3280441..3281118 1 NC_014834.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: nwi:Nwi_1757 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 3281118 10065307 Rpdx1_3080 Rhodopseudomonas palustris DX-1 leucyl/phenylalanyl-tRNA/protein transferase YP_004109394.1 3280441 D 652103 CDS YP_004109395.1 316934413 10065308 complement(3281133..3282107) 1 NC_014834.1 PFAM: Protein of unknown function DUF2155; KEGG: nha:Nham_1811 hypothetical protein; hypothetical protein 3282107 10065308 Rpdx1_3081 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109395.1 3281133 R 652103 CDS YP_004109396.1 316934414 10065309 3282340..3283284 1 NC_014834.1 KEGG: bbt:BBta_4223 putative lipase/esterase; putative lipase/esterase 3283284 10065309 Rpdx1_3082 Rhodopseudomonas palustris DX-1 putative lipase/esterase YP_004109396.1 3282340 D 652103 CDS YP_004109397.1 316934415 10065310 3283392..3284726 1 NC_014834.1 KEGG: bja:bll4656 hypothetical protein; beta-agarase 3284726 10065310 Rpdx1_3083 Rhodopseudomonas palustris DX-1 beta-agarase YP_004109397.1 3283392 D 652103 CDS YP_004109398.1 316934416 10065311 complement(3284748..3285686) 1 NC_014834.1 KEGG: bbt:BBta_4229 transcriptional regulator; PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3285686 10065311 Rpdx1_3084 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004109398.1 3284748 R 652103 CDS YP_004109399.1 316934417 10065312 3285809..3286513 1 NC_014834.1 PFAM: ThiJ/PfpI domain protein; KEGG: bja:bll4280 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 3286513 10065312 Rpdx1_3085 Rhodopseudomonas palustris DX-1 ThiJ/PfpI domain-containing protein YP_004109399.1 3285809 D 652103 CDS YP_004109400.1 316934418 10065313 complement(3286538..3286948) 1 NC_014834.1 PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: oca:OCAR_6312 NADH dehydrogenase; NADH:ubiquinone oxidoreductase 17.2 kD subunit 3286948 10065313 Rpdx1_3086 Rhodopseudomonas palustris DX-1 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_004109400.1 3286538 R 652103 CDS YP_004109401.1 316934419 10065314 3287302..3287646 1 NC_014834.1 KEGG: scl:sce6535 putative exported peptidase; putative exported peptidase 3287646 10065314 Rpdx1_3087 Rhodopseudomonas palustris DX-1 putative exported peptidase YP_004109401.1 3287302 D 652103 CDS YP_004109402.1 316934420 10065316 3288091..3290325 1 NC_014834.1 PFAM: Lytic transglycosylase catalytic; KEGG: bbt:BBta_4695 putative soluble lytic transglycosylase (SLT); lytic transglycosylase 3290325 10065316 Rpdx1_3089 Rhodopseudomonas palustris DX-1 lytic transglycosylase YP_004109402.1 3288091 D 652103 CDS YP_004109403.1 316934421 10065317 complement(3290628..3292079) 1 NC_014834.1 PFAM: porin; KEGG: bbt:BBta_3063 porin precursor domain-containing protein; porin 3292079 10065317 Rpdx1_3090 Rhodopseudomonas palustris DX-1 porin YP_004109403.1 3290628 R 652103 CDS YP_004109404.1 316934422 10065319 3293060..3293302 1 NC_014834.1 KEGG: bbt:BBta_6055 hypothetical protein; hypothetical protein 3293302 10065319 Rpdx1_3091 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109404.1 3293060 D 652103 CDS YP_004109405.1 316934423 10065320 complement(3293299..3293994) 1 NC_014834.1 KEGG: modB2; molybdate ABC transporter permease ModB-2; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit 3293994 10065320 Rpdx1_3092 Rhodopseudomonas palustris DX-1 molybdate ABC transporter inner membrane subunit YP_004109405.1 3293299 R 652103 CDS YP_004109406.1 316934424 10065321 complement(3294001..3294726) 1 NC_014834.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: modA2; molybdate ABC transporter periplasmic molybdate-binding protein ModA-2; molybdenum ABC transporter periplasmic molybdate-binding protein 3294726 10065321 Rpdx1_3093 Rhodopseudomonas palustris DX-1 molybdenum ABC transporter periplasmic molybdate-binding protein YP_004109406.1 3294001 R 652103 CDS YP_004109407.1 316934425 10065322 3294828..3295772 1 NC_014834.1 KEGG: modC2; molybdate ABC transporter ATP-binding protein ModC-2; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3295772 10065322 Rpdx1_3094 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109407.1 3294828 D 652103 CDS YP_004109408.1 316934426 10065323 complement(3296077..3296838) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: acr:Acry_1422 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3296838 10065323 Rpdx1_3095 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004109408.1 3296077 R 652103 CDS YP_004109409.1 316934427 10065324 complement(3296854..3298593) 1 NC_014834.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bbt:BBta_3208 putative nitrilase/cyanide hydratase family protein (carbon-nitrogen hydrolase); nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3298593 10065324 Rpdx1_3096 Rhodopseudomonas palustris DX-1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004109409.1 3296854 R 652103 CDS YP_004109410.1 316934428 10065325 complement(3298608..3299597) 1 NC_014834.1 PFAM: Acetamidase/Formamidase; KEGG: bbt:BBta_3207 putative acetamidase/formamidase family protein; acetamidase/formamidase 3299597 10065325 Rpdx1_3097 Rhodopseudomonas palustris DX-1 acetamidase/formamidase YP_004109410.1 3298608 R 652103 CDS YP_004109411.1 316934429 10065326 complement(3299622..3300335) 1 NC_014834.1 KEGG: bra:BRADO4854 putative branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3300335 10065326 Rpdx1_3098 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109411.1 3299622 R 652103 CDS YP_004109412.1 316934430 10065327 complement(3300328..3301050) 1 NC_014834.1 KEGG: bbt:BBta_3205 putative branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3301050 10065327 Rpdx1_3099 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109412.1 3300328 R 652103 CDS YP_004109413.1 316934431 10065328 complement(3301050..3302114) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bra:BRADO4856 branched chain amino acid ABC transporter permease; inner-membrane translocator 3302114 10065328 Rpdx1_3100 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004109413.1 3301050 R 652103 CDS YP_004109414.1 316934432 10065329 complement(3302126..3302998) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_3203 branched chain amino acid ABC transporter permease; inner-membrane translocator 3302998 10065329 Rpdx1_3101 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004109414.1 3302126 R 652103 CDS YP_004109415.1 316934433 10065330 complement(3303116..3304354) 1 NC_014834.1 KEGG: bra:BRADO4858 putative aliphatic amidase expression-regulating protein, AmiC; TIGRFAM: urea ABC transporter, substrate-binding protein; PFAM: Extracellular ligand-binding receptor; urea ABC transporter substrate-binding protein 3304354 10065330 Rpdx1_3102 Rhodopseudomonas palustris DX-1 urea ABC transporter substrate-binding protein YP_004109415.1 3303116 R 652103 CDS YP_004109416.1 316934434 10065331 complement(3304366..3305031) 1 NC_014834.1 PFAM: ANTAR domain protein; KEGG: bra:BRADO4859 hypothetical protein; response regulator receiver and ANTAR domain-containing protein 3305031 10065331 Rpdx1_3103 Rhodopseudomonas palustris DX-1 response regulator receiver and ANTAR domain-containing protein YP_004109416.1 3304366 R 652103 CDS YP_004109417.1 316934435 10065332 complement(3305028..3306185) 1 NC_014834.1 KEGG: bbt:BBta_3200 putative aliphatic amidase expression-regulating protein, AmiC; putative aliphatic amidase expression-regulating protein, AmiC 3306185 10065332 Rpdx1_3104 Rhodopseudomonas palustris DX-1 putative aliphatic amidase expression-regulating protein, AmiC YP_004109417.1 3305028 R 652103 CDS YP_004109418.1 316934436 10065333 3306581..3306916 1 NC_014834.1 KEGG: bja:blr5534 hypothetical protein; hypothetical protein 3306916 10065333 Rpdx1_3105 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109418.1 3306581 D 652103 CDS YP_004109419.1 316934437 10065334 3307179..3307298 1 NC_014834.1 hypothetical protein 3307298 10065334 Rpdx1_3106 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109419.1 3307179 D 652103 CDS YP_004109420.1 316934438 10065335 complement(3307636..3308526) 1 NC_014834.1 TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; KEGG: mag:amb1576 ADP-ribosyl-[dinitrogen reductase] glycohydrolase; PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosyl-(dinitrogen reductase) hydrolase 3308526 10065335 Rpdx1_3107 Rhodopseudomonas palustris DX-1 ADP-ribosyl-(dinitrogen reductase) hydrolase YP_004109420.1 3307636 R 652103 CDS YP_004109421.1 316934439 10065336 complement(3308538..3309347) 1 NC_014834.1 KEGG: mag:amb1575 NAD(+)-dinitrogen-reductase ADP-D-ribosyltransferase; PFAM: Dinitrogenase reductase ADP-ribosyltransferase; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 3309347 10065336 Rpdx1_3108 Rhodopseudomonas palustris DX-1 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase YP_004109421.1 3308538 R 652103 CDS YP_004109422.1 316934440 10065337 complement(3309501..3310505) 1 NC_014834.1 KEGG: bja:blr7666 transcriptional regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3310505 10065337 Rpdx1_3109 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004109422.1 3309501 R 652103 CDS YP_004109423.1 316934441 10065339 3311284..3313602 1 NC_014834.1 KEGG: rru:Rru_A0828 CRISPR-associated helicase Cas3 family protein protein; TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; SMART: DEAD-like helicase; CRISPR-associated HD domain-containing protein 3313602 10065339 Rpdx1_3110 Rhodopseudomonas palustris DX-1 CRISPR-associated HD domain-containing protein YP_004109423.1 3311284 D 652103 CDS YP_004109424.1 316934442 10065341 3314398..3314997 1 NC_014834.1 KEGG: lif:LinJ27.0410 calpain-like cysteine peptidase; hypothetical protein 3314997 10065341 Rpdx1_3112 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109424.1 3314398 D 652103 CDS YP_004109425.1 316934443 10065342 3314994..3316754 1 NC_014834.1 KEGG: rru:Rru_A0830 CRISPR-associated RAMP Csd1 family protein; TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133; Csd1 family CRISPR-associated protein 3316754 10065342 Rpdx1_3113 Rhodopseudomonas palustris DX-1 Csd1 family CRISPR-associated protein YP_004109425.1 3314994 D 652103 CDS YP_004109426.1 316934444 10065343 3316751..3317704 1 NC_014834.1 KEGG: rru:Rru_A0831 CRISPR-associated Csd2 family protein; TIGRFAM: CRISPR-associated protein, Csd2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801; protein Csd2 family protein 3317704 10065343 Rpdx1_3114 Rhodopseudomonas palustris DX-1 protein Csd2 family protein YP_004109426.1 3316751 D 652103 CDS YP_004109427.1 316934445 10065344 3317722..3318393 1 NC_014834.1 TIGRFAM: CRISPR-associated protein Cas4; KEGG: rru:Rru_A0832 CRISPR-associated exonuclease Cas4 family protein; CRISPR-associated protein Cas4 3318393 10065344 Rpdx1_3115 Rhodopseudomonas palustris DX-1 CRISPR-associated protein Cas4 YP_004109427.1 3317722 D 652103 CDS YP_004109428.1 316934446 10065345 3318390..3319424 1 NC_014834.1 KEGG: nwi:Nwi_1936 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated protein Cas1 3319424 10065345 Rpdx1_3116 Rhodopseudomonas palustris DX-1 CRISPR-associated protein Cas1 YP_004109428.1 3318390 D 652103 CDS YP_004109429.1 316934447 10065346 3319545..3319835 1 NC_014834.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: rsk:RSKD131_1963 CRISPR-associated protein, Cas2 family; CRISPR-associated protein Cas2 3319835 10065346 Rpdx1_3117 Rhodopseudomonas palustris DX-1 CRISPR-associated protein Cas2 YP_004109429.1 3319545 D 652103 CDS YP_004109430.1 316934448 10065347 3323722..3325743 1 NC_014834.1 KEGG: rce:RC1_0319 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; anaerobic ribonucleoside-triphosphate reductase 3325743 10065347 Rpdx1_3118 Rhodopseudomonas palustris DX-1 anaerobic ribonucleoside-triphosphate reductase YP_004109430.1 3323722 D 652103 CDS YP_004109431.1 316934449 10065348 3325761..3325952 1 NC_014834.1 KEGG: pde:Pden_2988 hypothetical protein; hypothetical protein 3325952 10065348 Rpdx1_3119 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109431.1 3325761 D 652103 CDS YP_004109432.1 316934450 10065349 3325909..3326541 1 NC_014834.1 KEGG: rce:RC1_0317 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; anaerobic ribonucleoside-triphosphate reductase activating protein 3326541 10065349 Rpdx1_3120 Rhodopseudomonas palustris DX-1 anaerobic ribonucleoside-triphosphate reductase activating protein YP_004109432.1 3325909 D 652103 CDS YP_004109433.1 316934451 10065350 3326957..3328582 1 NC_014834.1 KEGG: avn:Avin_49020 sigma54-dependent transcriptional activator for the iron only nitrogenase, AnfA; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase; NifA subfamily transcriptional regulator 3328582 10065350 Rpdx1_3121 Rhodopseudomonas palustris DX-1 NifA subfamily transcriptional regulator YP_004109433.1 3326957 D 652103 CDS YP_004109434.1 316934452 10065351 3329110..3329937 1 NC_014834.1 TIGRFAM: nitrogenase iron protein; KEGG: anfH; nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein 3329937 10065351 Rpdx1_3122 Rhodopseudomonas palustris DX-1 nitrogenase iron protein YP_004109434.1 3329110 D 652103 CDS YP_004109435.1 316934453 10065352 3329987..3331555 1 NC_014834.1 TIGRFAM: nitrogenase iron-iron protein, alpha chain; nitrogenase alpha chain; nitrogenase component I, alpha chain; KEGG: cts:Ctha_1831 nitrogenase alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase iron-iron protein subunit alpha 3331555 10065352 Rpdx1_3123 Rhodopseudomonas palustris DX-1 nitrogenase iron-iron protein subunit alpha YP_004109435.1 3329987 D 652103 CDS YP_004109436.1 316934454 10065353 3331568..3332008 1 NC_014834.1 TIGRFAM: Fe-only nitrogenase, delta subunit; KEGG: rru:Rru_A1393 nitrogenase; PFAM: Vanadium/alternative nitrogenase delta subunit; Fe-only nitrogenase subunit delta 3332008 10065353 Rpdx1_3124 Rhodopseudomonas palustris DX-1 Fe-only nitrogenase subunit delta YP_004109436.1 3331568 D 652103 CDS YP_004109437.1 316934455 10065354 3332022..3333407 1 NC_014834.1 KEGG: rru:Rru_A1392 nitrogenase; TIGRFAM: Fe-only nitrogenase, beta subunit; PFAM: oxidoreductase/nitrogenase component 1; Fe-only nitrogenase subunit beta 3333407 10065354 Rpdx1_3125 Rhodopseudomonas palustris DX-1 Fe-only nitrogenase subunit beta YP_004109437.1 3332022 D 652103 CDS YP_004109438.1 316934456 10065355 3333442..3334182 1 NC_014834.1 KEGG: avn:Avin_48960 Fe-only nitrogenase accessory protein AnfO; TIGRFAM: Fe-only nitrogenase accessory protein AnfO; PFAM: Nitrogenase iron-iron accessory protein AnfO; Fe-only nitrogenase accessory protein AnfO 3334182 10065355 Rpdx1_3126 Rhodopseudomonas palustris DX-1 Fe-only nitrogenase accessory protein AnfO YP_004109438.1 3333442 D 652103 CDS YP_004109439.1 316934457 10065356 3334179..3334769 1 NC_014834.1 KEGG: rru:Rru_A1390 hypothetical protein; hypothetical protein 3334769 10065356 Rpdx1_3127 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109439.1 3334179 D 652103 CDS YP_004109440.1 316934458 10065357 3334827..3335357 1 NC_014834.1 KEGG: cts:Ctha_1834 putative nitroimidazole resistance protein; putative nitroimidazole resistance protein 3335357 10065357 Rpdx1_3128 Rhodopseudomonas palustris DX-1 putative nitroimidazole resistance protein YP_004109440.1 3334827 D 652103 CDS YP_004109441.1 316934459 10065358 complement(3335529..3336362) 1 NC_014834.1 manually curated; KEGG: mca:MCA1828 dinitrogenase reductase ADP-ribosyltransferase-like protein; PFAM: Dinitrogenase reductase ADP-ribosyltransferase; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 3336362 10065358 Rpdx1_3129 Rhodopseudomonas palustris DX-1 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase YP_004109441.1 3335529 R 652103 CDS YP_004109442.1 316934460 10065359 complement(3336595..3337140) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bay:RBAM_024110 YrkN; N-acetyltransferase GCN5 3337140 10065359 Rpdx1_3130 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004109442.1 3336595 R 652103 CDS YP_004109443.1 316934461 10065360 complement(3337185..3338849) 1 NC_014834.1 KEGG: xau:Xaut_2451 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; RND efflux system outer membrane lipoprotein 3338849 10065360 Rpdx1_3131 Rhodopseudomonas palustris DX-1 RND efflux system outer membrane lipoprotein YP_004109443.1 3337185 R 652103 CDS YP_004109444.1 316934462 10065361 complement(3338924..3342091) 1 NC_014834.1 KEGG: ara:Arad_9281 multidrug efflux transporter protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3342091 10065361 Rpdx1_3132 Rhodopseudomonas palustris DX-1 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004109444.1 3338924 R 652103 CDS YP_004109445.1 316934463 10065362 complement(3342088..3343305) 1 NC_014834.1 KEGG: ara:Arad_4545 protein secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3343305 10065362 Rpdx1_3133 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004109445.1 3342088 R 652103 CDS YP_004109446.1 316934464 10065363 3343618..3343944 1 NC_014834.1 KEGG: rlt:Rleg2_2361 hypothetical protein; hypothetical protein 3343944 10065363 Rpdx1_3134 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109446.1 3343618 D 652103 CDS YP_004109447.1 316934465 10065364 3344017..3344703 1 NC_014834.1 KEGG: bja:bll3559 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 3344703 10065364 Rpdx1_3135 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004109447.1 3344017 D 652103 CDS YP_004109448.1 316934466 10065365 3344700..3345833 1 NC_014834.1 KEGG: bja:bll3558 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3345833 10065365 Rpdx1_3136 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004109448.1 3344700 D 652103 CDS YP_004109449.1 316934467 10065366 complement(3345957..3347228) 1 NC_014834.1 PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xau:Xaut_1514 flavocytochrome c sulphide dehydrogenase flavin-binding; flavocytochrome c sulfide dehydrogenase flavin-binding protein 3347228 10065366 Rpdx1_3137 Rhodopseudomonas palustris DX-1 flavocytochrome c sulfide dehydrogenase flavin-binding protein YP_004109449.1 3345957 R 652103 CDS YP_004109450.1 316934468 10065367 complement(3347289..3348554) 1 NC_014834.1 PFAM: Flavocytochrome c sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xau:Xaut_1514 flavocytochrome c sulphide dehydrogenase flavin-binding; flavocytochrome c sulfide dehydrogenase flavin-binding protein 3348554 10065367 Rpdx1_3138 Rhodopseudomonas palustris DX-1 flavocytochrome c sulfide dehydrogenase flavin-binding protein YP_004109450.1 3347289 R 652103 CDS YP_004109451.1 316934469 10065368 complement(3348589..3349008) 1 NC_014834.1 KEGG: sil:SPO1000 diheme cytochrome c SoxE; hypothetical protein 3349008 10065368 Rpdx1_3139 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109451.1 3348589 R 652103 CDS YP_004109452.1 316934470 10065369 complement(3349048..3350160) 1 NC_014834.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dar:Daro_3126 YeeE/YedE; hypothetical protein 3350160 10065369 Rpdx1_3140 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109452.1 3349048 R 652103 CDS YP_004109453.1 316934471 10065370 complement(3350371..3351126) 1 NC_014834.1 KEGG: bra:BRADO3185 putative sulfite oxidase cytochrome subunit (SoxD); putative sulfite oxidase cytochrome subunit SoxD 3351126 10065370 Rpdx1_3141 Rhodopseudomonas palustris DX-1 putative sulfite oxidase cytochrome subunit SoxD YP_004109453.1 3350371 R 652103 CDS YP_004109454.1 316934472 10065371 complement(3351110..3352402) 1 NC_014834.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: xau:Xaut_1518 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin-binding protein 3352402 10065371 Rpdx1_3142 Rhodopseudomonas palustris DX-1 oxidoreductase molybdopterin-binding protein YP_004109454.1 3351110 R 652103 CDS YP_004109455.1 316934473 10065372 complement(3352472..3354169) 1 NC_014834.1 PFAM: 5'-Nucleotidase domain protein; KEGG: xau:Xaut_1519 5'-nucleotidase domain-containing protein; 5'-nucleotidase domain-containing protein 3354169 10065372 Rpdx1_3143 Rhodopseudomonas palustris DX-1 5'-nucleotidase domain-containing protein YP_004109455.1 3352472 R 652103 CDS YP_004109456.1 316934474 10065373 complement(3354313..3354642) 1 NC_014834.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: xau:Xaut_1520 sulphur oxidation protein SoxZ; sulfur oxidation protein SoxZ 3354642 10065373 Rpdx1_3144 Rhodopseudomonas palustris DX-1 sulfur oxidation protein SoxZ YP_004109456.1 3354313 R 652103 CDS YP_004109457.1 316934475 10065374 complement(3354680..3355144) 1 NC_014834.1 KEGG: xau:Xaut_1521 sulfur oxidation protein SoxY; sulfur oxidation protein SoxY 3355144 10065374 Rpdx1_3145 Rhodopseudomonas palustris DX-1 sulfur oxidation protein SoxY YP_004109457.1 3354680 R 652103 CDS YP_004109458.1 316934476 10065375 3355327..3356148 1 NC_014834.1 KEGG: xau:Xaut_1522 hypothetical protein; hypothetical protein 3356148 10065375 Rpdx1_3146 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109458.1 3355327 D 652103 CDS YP_004109459.1 316934477 10065376 3356161..3356898 1 NC_014834.1 KEGG: xau:Xaut_1523 hypothetical protein; hypothetical protein 3356898 10065376 Rpdx1_3147 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109459.1 3356161 D 652103 CDS YP_004109460.1 316934478 10065377 3356921..3357424 1 NC_014834.1 PFAM: protein of unknown function DUF336; KEGG: mea:Mex_1p2555 hypothetical protein; hypothetical protein 3357424 10065377 Rpdx1_3148 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109460.1 3356921 D 652103 CDS YP_004109461.1 316934479 10065378 complement(3357562..3358152) 1 NC_014834.1 KEGG: bja:blr3510 thioredoxin; thioredoxin 3358152 10065378 Rpdx1_3149 Rhodopseudomonas palustris DX-1 thioredoxin YP_004109461.1 3357562 R 652103 CDS YP_004109462.1 316934480 10065379 complement(3358181..3358924) 1 NC_014834.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mdi:METDI0762 sulfur oxidation V protein, cytochrome c-type biogenesis protein; cytochrome c biogenesis transmembrane protein 3358924 10065379 Rpdx1_3150 Rhodopseudomonas palustris DX-1 cytochrome c biogenesis transmembrane protein YP_004109462.1 3358181 R 652103 CDS YP_004109463.1 316934481 10065380 3358981..3359385 1 NC_014834.1 KEGG: xau:Xaut_1526 hypothetical protein; hypothetical protein 3359385 10065380 Rpdx1_3151 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109463.1 3358981 D 652103 CDS YP_004109464.1 316934482 10065381 3359454..3359828 1 NC_014834.1 KEGG: xau:Xaut_1527 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 3359828 10065381 Rpdx1_3152 Rhodopseudomonas palustris DX-1 regulatory protein ArsR YP_004109464.1 3359454 D 652103 CDS YP_004109465.1 316934483 10065382 3359905..3361104 1 NC_014834.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: xau:Xaut_1528 protein of unknown function DUF395 YeeE/YedE; hypothetical protein 3361104 10065382 Rpdx1_3153 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109465.1 3359905 D 652103 CDS YP_004109466.1 316934484 10065383 complement(3361019..3361471) 1 NC_014834.1 KEGG: bra:BRADO1133 YchN-like; hypothetical protein 3361471 10065383 Rpdx1_3154 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109466.1 3361019 R 652103 CDS YP_004109467.1 316934485 10065384 complement(3361706..3362761) 1 NC_014834.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: oca:OCAR_5191 possible membrane protein with ATP/GTP-binding site motif A; hypothetical protein 3362761 10065384 Rpdx1_3155 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109467.1 3361706 R 652103 CDS YP_004109468.1 316934486 10065385 complement(3363154..3364044) 1 NC_014834.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: oan:Oant_1901 siderophore-interacting protein; Siderophore-interacting protein 3364044 10065385 Rpdx1_3156 Rhodopseudomonas palustris DX-1 Siderophore-interacting protein YP_004109468.1 3363154 R 652103 CDS YP_004109469.1 316934487 10065386 complement(3364047..3364874) 1 NC_014834.1 KEGG: gau:GAU_3226 putative iron ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3364874 10065386 Rpdx1_3157 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109469.1 3364047 R 652103 CDS YP_004109470.1 316934488 10065387 complement(3364871..3365929) 1 NC_014834.1 PFAM: transport system permease protein; KEGG: gau:GAU_3227 putative iron ABC transporter permease; transporter permease 3365929 10065387 Rpdx1_3158 Rhodopseudomonas palustris DX-1 transporter permease YP_004109470.1 3364871 R 652103 CDS YP_004109471.1 316934489 10065388 complement(3365926..3367092) 1 NC_014834.1 KEGG: pfl:PFL_3500 solute-binding periplasmic protein of iron/siderophore ABC transporter; solute-binding periplasmic protein of iron/siderophore ABC transporter 3367092 10065388 Rpdx1_3159 Rhodopseudomonas palustris DX-1 solute-binding periplasmic protein of iron/siderophore ABC transporter YP_004109471.1 3365926 R 652103 CDS YP_004109472.1 316934490 10065389 complement(3367122..3368057) 1 NC_014834.1 PFAM: putative esterase; KEGG: bay:RBAM_029060 YuiI; putative esterase 3368057 10065389 Rpdx1_3160 Rhodopseudomonas palustris DX-1 putative esterase YP_004109472.1 3367122 R 652103 CDS YP_004109473.1 316934491 10065390 complement(3368067..3370448) 1 NC_014834.1 KEGG: ara:Arad_9688 ferrichrome-iron transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 3370448 10065390 Rpdx1_3161 Rhodopseudomonas palustris DX-1 TonB-dependent siderophore receptor YP_004109473.1 3368067 R 652103 CDS YP_004109474.1 316934492 10065391 complement(3370640..3372733) 1 NC_014834.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: oan:Oant_4087 TonB-dependent receptor; TonB-dependent receptor 3372733 10065391 Rpdx1_3162 Rhodopseudomonas palustris DX-1 TonB-dependent receptor YP_004109474.1 3370640 R 652103 CDS YP_004109475.1 316934493 10065392 3373033..3374028 1 NC_014834.1 KEGG: hch:HCH_01309 AraC-type DNA-binding domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3374028 10065392 Rpdx1_3163 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004109475.1 3373033 D 652103 CDS YP_004109476.1 316934494 10065393 3374496..3375497 1 NC_014834.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sme:SM_b20636 putative transposase of insertion sequence ISRm19 protein; transposase IS116/IS110/IS902 family protein 3375497 10065393 Rpdx1_3164 Rhodopseudomonas palustris DX-1 transposase IS116/IS110/IS902 family protein YP_004109476.1 3374496 D 652103 CDS YP_004109477.1 316934495 10065394 complement(3375717..3376481) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbr:BB2681 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3376481 10065394 Rpdx1_3165 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004109477.1 3375717 R 652103 CDS YP_004109478.1 316934496 10065395 complement(3376478..3378016) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: azc:AZC_2772 AMP-dependent synthetase; AMP-dependent synthetase and ligase 3378016 10065395 Rpdx1_3166 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004109478.1 3376478 R 652103 CDS YP_004109479.1 316934497 10065396 complement(3378013..3379044) 1 NC_014834.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ttr:Tter_0818 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 3379044 10065396 Rpdx1_3167 Rhodopseudomonas palustris DX-1 oligopeptide/dipeptide ABC transporter ATPase YP_004109479.1 3378013 R 652103 CDS YP_004109480.1 316934498 10065397 complement(3379022..3380026) 1 NC_014834.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: mrd:Mrad2831_4369 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 3380026 10065397 Rpdx1_3168 Rhodopseudomonas palustris DX-1 oligopeptide/dipeptide ABC transporter ATPase YP_004109480.1 3379022 R 652103 CDS YP_004109481.1 316934499 10065398 complement(3380028..3380885) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_3318 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 3380885 10065398 Rpdx1_3169 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004109481.1 3380028 R 652103 CDS YP_004109482.1 316934500 10065399 complement(3380889..3381857) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2651 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 3381857 10065399 Rpdx1_3170 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004109482.1 3380889 R 652103 CDS YP_004109483.1 316934501 10065400 complement(3381878..3383485) 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_1982 putative ABC transporter, periplasmic binding protein; family 5 extracellular solute-binding protein 3383485 10065400 Rpdx1_3171 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004109483.1 3381878 R 652103 CDS YP_004109484.1 316934502 10065401 complement(3383561..3383995) 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bbr:BB1176 hypothetical protein; thioesterase superfamily protein 3383995 10065401 Rpdx1_3172 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004109484.1 3383561 R 652103 CDS YP_004109485.1 316934503 10065402 complement(3383992..3385005) 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbr:BB0342 zinc-binding dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 3385005 10065402 Rpdx1_3173 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004109485.1 3383992 R 652103 CDS YP_004109486.1 316934504 10065403 complement(3385070..3385936) 1 NC_014834.1 KEGG: azc:AZC_2262 hypothetical protein; hypothetical protein 3385936 10065403 Rpdx1_3174 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109486.1 3385070 R 652103 CDS YP_004109487.1 316934505 10065404 complement(3386159..3387328) 1 NC_014834.1 TIGRFAM: amidohydrolase; KEGG: oan:Oant_3314 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3387328 10065404 Rpdx1_3175 Rhodopseudomonas palustris DX-1 amidohydrolase YP_004109487.1 3386159 R 652103 CDS YP_004109488.1 316934506 10065405 complement(3387407..3388582) 1 NC_014834.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: svi:Svir_03020 cysteine synthase; pyridoxal-5'-phosphate-dependent protein subunit beta 3388582 10065405 Rpdx1_3176 Rhodopseudomonas palustris DX-1 pyridoxal-5'-phosphate-dependent protein subunit beta YP_004109488.1 3387407 R 652103 CDS YP_004109489.1 316934507 10065406 3388825..3389292 1 NC_014834.1 KEGG: sil:SPO3179 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 3389292 10065406 Rpdx1_3177 Rhodopseudomonas palustris DX-1 AsnC family transcriptional regulator YP_004109489.1 3388825 D 652103 CDS YP_004109490.1 316934508 10065407 3389678..3389953 1 NC_014834.1 KEGG: nwi:Nwi_2907 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 3389953 10065407 Rpdx1_3178 Rhodopseudomonas palustris DX-1 regulatory protein ArsR YP_004109490.1 3389678 D 652103 CDS YP_004109491.1 316934509 10065408 3389968..3390306 1 NC_014834.1 KEGG: aeh:Mlg_1777 hypothetical protein; hypothetical protein 3390306 10065408 Rpdx1_3179 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109491.1 3389968 D 652103 CDS YP_004109492.1 316934510 10065409 complement(3390485..3391006) 1 NC_014834.1 KEGG: nwi:Nwi_2303 fec I like protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; ECF subfamily RNA polymerase sigma-24 subunit 3391006 10065409 Rpdx1_3180 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004109492.1 3390485 R 652103 CDS YP_004109493.1 316934511 10065410 3391279..3393060 1 NC_014834.1 PFAM: IucA/IucC family protein; KEGG: nwi:Nwi_2302 siderophore synthetase component; IucA/IucC family protein 3393060 10065410 Rpdx1_3181 Rhodopseudomonas palustris DX-1 IucA/IucC family protein YP_004109493.1 3391279 D 652103 CDS YP_004109494.1 316934512 10065411 3393044..3394774 1 NC_014834.1 PFAM: IucA/IucC family protein; KEGG: nwi:Nwi_2301 siderophore synthetase component; IucA/IucC family protein 3394774 10065411 Rpdx1_3182 Rhodopseudomonas palustris DX-1 IucA/IucC family protein YP_004109494.1 3393044 D 652103 CDS YP_004109495.1 316934513 10065412 3394771..3396036 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: nwi:Nwi_2300 acyl-CoA synthetase; AMP-dependent synthetase and ligase 3396036 10065412 Rpdx1_3183 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004109495.1 3394771 D 652103 CDS YP_004109496.1 316934514 10065413 3396033..3397346 1 NC_014834.1 KEGG: nwi:Nwi_2299 hypothetical protein; hypothetical protein 3397346 10065413 Rpdx1_3184 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109496.1 3396033 D 652103 CDS YP_004109497.1 316934515 10065414 3397343..3398245 1 NC_014834.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: nwi:Nwi_2298 xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 3398245 10065414 Rpdx1_3185 Rhodopseudomonas palustris DX-1 xylose isomerase domain-containing protein YP_004109497.1 3397343 D 652103 CDS YP_004109498.1 316934516 10065415 3398260..3399165 1 NC_014834.1 PFAM: periplasmic binding protein; KEGG: rsp:RSP_3079 ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein; periplasmic-binding protein 3399165 10065415 Rpdx1_3186 Rhodopseudomonas palustris DX-1 periplasmic-binding protein YP_004109498.1 3398260 D 652103 CDS YP_004109499.1 316934517 10065416 3399162..3400139 1 NC_014834.1 PFAM: transport system permease protein; KEGG: rsp:RSP_3220 ABC ferric siderophore transporter, inner membrane subunit; transporter permease 3400139 10065416 Rpdx1_3187 Rhodopseudomonas palustris DX-1 transporter permease YP_004109499.1 3399162 D 652103 CDS YP_004109500.1 316934518 10065417 3400132..3401082 1 NC_014834.1 PFAM: transport system permease protein; KEGG: atc:AGR_C_4491 ferrichrome ABC transporter (permease) homolog; transporter permease 3401082 10065417 Rpdx1_3188 Rhodopseudomonas palustris DX-1 transporter permease YP_004109500.1 3400132 D 652103 CDS YP_004109501.1 316934519 10065418 3401079..3401837 1 NC_014834.1 KEGG: rsh:Rsph17029_3961 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3401837 10065418 Rpdx1_3189 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109501.1 3401079 D 652103 CDS YP_004109502.1 316934520 10065419 3401952..3402950 1 NC_014834.1 PFAM: FecR protein; KEGG: nwi:Nwi_2297 FecR protein; anti-FecI sigma factor FecR 3402950 10065419 Rpdx1_3190 Rhodopseudomonas palustris DX-1 anti-FecI sigma factor FecR YP_004109502.1 3401952 D 652103 CDS YP_004109503.1 316934521 10065420 3403047..3405311 1 NC_014834.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; Secretin/TonB short domain; KEGG: nwi:Nwi_2296 TonB-dependent receptor; TonB-dependent receptor 3405311 10065420 Rpdx1_3191 Rhodopseudomonas palustris DX-1 TonB-dependent receptor YP_004109503.1 3403047 D 652103 CDS YP_004109504.1 316934522 10065421 3405423..3405920 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nwi:Nwi_2295 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3405920 10065421 Rpdx1_3192 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004109504.1 3405423 D 652103 CDS YP_004109505.1 316934523 10065422 3406215..3408533 1 NC_014834.1 KEGG: nwi:Nwi_2294 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 3408533 10065422 Rpdx1_3193 Rhodopseudomonas palustris DX-1 TonB-dependent siderophore receptor YP_004109505.1 3406215 D 652103 CDS YP_004109506.1 316934524 10065423 3408648..3408950 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_2293 hypothetical protein; hypothetical protein 3408950 10065423 Rpdx1_3194 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109506.1 3408648 D 652103 CDS YP_004109507.1 316934525 10065424 complement(3409092..3409961) 1 NC_014834.1 PFAM: UspA domain protein; KEGG: pla:Plav_3480 UspA domain-containing protein; UspA domain-containing protein 3409961 10065424 Rpdx1_3195 Rhodopseudomonas palustris DX-1 UspA domain-containing protein YP_004109507.1 3409092 R 652103 CDS YP_004109508.1 316934526 10065425 complement(3410202..3411638) 1 NC_014834.1 PFAM: Citrate transporter; KEGG: aeh:Mlg_1768 citrate transporter; citrate transporter 3411638 10065425 Rpdx1_3196 Rhodopseudomonas palustris DX-1 citrate transporter YP_004109508.1 3410202 R 652103 CDS YP_004109509.1 316934527 10065426 complement(3411684..3414407) 1 NC_014834.1 KEGG: nar:Saro_0399 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; HAD superfamily P-type ATPase 3414407 10065426 Rpdx1_3197 Rhodopseudomonas palustris DX-1 HAD superfamily P-type ATPase YP_004109509.1 3411684 R 652103 CDS YP_004109510.1 316934528 10065427 complement(3414442..3414633) 1 NC_014834.1 KEGG: pat:Patl_2284 sodium/hydrogen exchanger; sodium/hydrogen exchanger 3414633 10065427 Rpdx1_3198 Rhodopseudomonas palustris DX-1 sodium/hydrogen exchanger YP_004109510.1 3414442 R 652103 CDS YP_004109511.1 316934529 10065428 complement(3414890..3415579) 1 NC_014834.1 PFAM: protein of unknown function DUF502; KEGG: eba:ebA5013 hypothetical protein; hypothetical protein 3415579 10065428 Rpdx1_3199 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109511.1 3414890 R 652103 CDS YP_004109512.1 316934530 10065429 3415734..3416258 1 NC_014834.1 PFAM: cation antiporter; KEGG: msl:Msil_1032 hypothetical protein; cation antiporter 3416258 10065429 Rpdx1_3200 Rhodopseudomonas palustris DX-1 cation antiporter YP_004109512.1 3415734 D 652103 CDS YP_004109513.1 316934531 10065430 3416255..3416539 1 NC_014834.1 KEGG: msl:Msil_1033 hypothetical protein; hypothetical protein 3416539 10065430 Rpdx1_3201 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109513.1 3416255 D 652103 CDS YP_004109514.1 316934532 10065431 3416536..3416859 1 NC_014834.1 PFAM: Na+/H+ antiporter subunit; KEGG: hha:Hhal_0816 putative monovalent cation/H+ antiporter subunit G; Na+/H+ antiporter subunit 3416859 10065431 Rpdx1_3202 Rhodopseudomonas palustris DX-1 Na+/H+ antiporter subunit YP_004109514.1 3416536 D 652103 CDS YP_004109515.1 316934533 10065432 3416856..3417797 1 NC_014834.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: bja:blr7318 hypothetical protein; Na+/H+ antiporter MnhB subunit-like protein 3417797 10065432 Rpdx1_3203 Rhodopseudomonas palustris DX-1 Na+/H+ antiporter MnhB subunit-like protein YP_004109515.1 3416856 D 652103 CDS YP_004109516.1 316934534 10065433 3417794..3418123 1 NC_014834.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: msl:Msil_1036 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 3418123 10065433 Rpdx1_3204 Rhodopseudomonas palustris DX-1 NADH-ubiquinone oxidoreductase subunit 4L YP_004109516.1 3417794 D 652103 CDS YP_004109517.1 316934535 10065434 3418104..3419624 1 NC_014834.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: msl:Msil_1037 NADH dehydrogenase (quinone); NADH/ubiquinone/plastoquinone 3419624 10065434 Rpdx1_3205 Rhodopseudomonas palustris DX-1 NADH/ubiquinone/plastoquinone YP_004109517.1 3418104 D 652103 CDS YP_004109518.1 316934536 10065435 3419621..3421096 1 NC_014834.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sfr:Sfri_2742 NADH dehydrogenase (quinone); NADH/ubiquinone/plastoquinone 3421096 10065435 Rpdx1_3206 Rhodopseudomonas palustris DX-1 NADH/ubiquinone/plastoquinone YP_004109518.1 3419621 D 652103 CDS YP_004109519.1 316934537 10065436 3421093..3422766 1 NC_014834.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: xau:Xaut_1581 NADH/ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone 3422766 10065436 Rpdx1_3207 Rhodopseudomonas palustris DX-1 NADH/ubiquinone/plastoquinone YP_004109519.1 3421093 D 652103 CDS YP_004109520.1 316934538 10065437 complement(3422794..3425949) 1 NC_014834.1 KEGG: pmy:Pmen_0826 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3425949 10065437 Rpdx1_3208 Rhodopseudomonas palustris DX-1 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004109520.1 3422794 R 652103 CDS YP_004109521.1 316934539 10065438 complement(3425949..3427160) 1 NC_014834.1 KEGG: oan:Oant_0375 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3427160 10065438 Rpdx1_3209 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004109521.1 3425949 R 652103 CDS YP_004109522.1 316934540 10065439 3427469..3430057 1 NC_014834.1 PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; KEGG: xca:xccb100_1109 quinoprotein glucose dehydrogenase; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; quinate dehydrogenase 3430057 10065439 Rpdx1_3210 Rhodopseudomonas palustris DX-1 quinate dehydrogenase YP_004109522.1 3427469 D 652103 CDS YP_004109523.1 316934541 10065440 complement(3430149..3430820) 1 NC_014834.1 PFAM: ferric-uptake regulator; KEGG: oca:OCAR_4496 ferric uptake regulator, FUR family; Fur family ferric uptake regulator 3430820 10065440 Rpdx1_3211 Rhodopseudomonas palustris DX-1 Fur family ferric uptake regulator YP_004109523.1 3430149 R 652103 CDS YP_004109524.1 316934542 10065441 3431064..3431567 1 NC_014834.1 KEGG: eba:ebA616 hypothetical protein; hypothetical protein 3431567 10065441 Rpdx1_3212 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109524.1 3431064 D 652103 CDS YP_004109525.1 316934543 10065442 3431575..3431901 1 NC_014834.1 KEGG: eba:ebB16 hypothetical protein; hypothetical protein 3431901 10065442 Rpdx1_3213 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109525.1 3431575 D 652103 CDS YP_004109526.1 316934544 10065443 3431921..3432247 1 NC_014834.1 KEGG: avn:Avin_22680 hypothetical protein; hypothetical protein 3432247 10065443 Rpdx1_3214 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109526.1 3431921 D 652103 CDS YP_004109527.1 316934545 10065444 3432234..3432575 1 NC_014834.1 KEGG: avn:Avin_22690 hypothetical protein; hypothetical protein 3432575 10065444 Rpdx1_3215 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109527.1 3432234 D 652103 CDS YP_004109528.1 316934546 10065445 3432568..3432903 1 NC_014834.1 KEGG: avn:Avin_22700 hypothetical protein; hypothetical protein 3432903 10065445 Rpdx1_3216 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109528.1 3432568 D 652103 CDS YP_004109529.1 316934547 10065446 3432900..3435029 1 NC_014834.1 KEGG: eba:ebA609 putative cation transport ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase 3435029 10065446 Rpdx1_3217 Rhodopseudomonas palustris DX-1 heavy metal translocating P-type ATPase YP_004109529.1 3432900 D 652103 CDS YP_004109530.1 316934548 10065447 complement(3435023..3435499) 1 NC_014834.1 KEGG: mdi:METDI4458 hypothetical protein; hypothetical protein 3435499 10065447 Rpdx1_3218 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109530.1 3435023 R 652103 CDS YP_004109531.1 316934549 10065448 complement(3435496..3436146) 1 NC_014834.1 KEGG: bja:blr4686 hypothetical protein; hypothetical protein 3436146 10065448 Rpdx1_3219 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109531.1 3435496 R 652103 CDS YP_004109532.1 316934550 10065449 complement(3436557..3437243) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bja:blr4685 transcriptional regulatory protein; regulatory protein TetR 3437243 10065449 Rpdx1_3220 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004109532.1 3436557 R 652103 CDS YP_004109533.1 316934551 10065450 3437401..3438060 1 NC_014834.1 KEGG: tmz:Tmz1t_2068 hypothetical protein; hypothetical protein 3438060 10065450 Rpdx1_3221 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109533.1 3437401 D 652103 CDS YP_004109534.1 316934552 10065451 3438360..3439781 1 NC_014834.1 KEGG: azc:AZC_4654 sensor protein FixL; PFAM: ATP-binding region ATPase domain protein; CHASE3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; multi-sensor signal transduction histidine kinase 3439781 10065451 Rpdx1_3222 Rhodopseudomonas palustris DX-1 multi-sensor signal transduction histidine kinase YP_004109534.1 3438360 D 652103 CDS YP_004109535.1 316934553 10065452 complement(3439766..3442045) 1 NC_014834.1 KEGG: nha:Nham_2169 adenylate/guanylate cyclase; PFAM: CHASE2 domain protein; adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase with Chase sensor 3442045 10065452 Rpdx1_3223 Rhodopseudomonas palustris DX-1 adenylate/guanylate cyclase with Chase sensor YP_004109535.1 3439766 R 652103 CDS YP_004109536.1 316934554 10065453 3442197..3442622 1 NC_014834.1 KEGG: sro:Sros_2899 hypothetical protein; hypothetical protein 3442622 10065453 Rpdx1_3224 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109536.1 3442197 D 652103 CDS YP_004109537.1 316934555 10065454 complement(3442652..3444352) 1 NC_014834.1 KEGG: nwi:Nwi_1759 hypothetical protein; hypothetical protein 3444352 10065454 Rpdx1_3225 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109537.1 3442652 R 652103 CDS YP_004109538.1 316934556 10065455 complement(3444364..3445671) 1 NC_014834.1 KEGG: nha:Nham_2170 tetratricopeptide TPR_2; tetratricopeptide-repeat containing protein 3445671 10065455 Rpdx1_3226 Rhodopseudomonas palustris DX-1 tetratricopeptide-repeat containing protein YP_004109538.1 3444364 R 652103 CDS YP_004109539.1 316934557 10065456 3445986..3446459 1 NC_014834.1 PFAM: Polyketide cyclase/dehydrase; KEGG: fal:FRAAL3046 hypothetical protein; polyketide cyclase/dehydrase 3446459 10065456 Rpdx1_3227 Rhodopseudomonas palustris DX-1 polyketide cyclase/dehydrase YP_004109539.1 3445986 D 652103 CDS YP_004109540.1 316934558 10065457 complement(3446471..3447901) 1 NC_014834.1 KEGG: hypothetical protein; hypothetical protein 3447901 10065457 Rpdx1_3228 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109540.1 3446471 R 652103 CDS YP_004109541.1 316934559 10065458 complement(3448663..3450288) 1 NC_014834.1 KEGG: bra:BRADO3737 peptide chain release factor RF-3; GTP-binding factor; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; peptide chain release factor 3 3450288 10065458 Rpdx1_3229 Rhodopseudomonas palustris DX-1 peptide chain release factor 3 YP_004109541.1 3448663 R 652103 CDS YP_004109542.1 316934560 10065459 3450519..3450833 1 NC_014834.1 PFAM: small multidrug resistance protein; KEGG: nha:Nham_1679 small multidrug resistance protein; small multidrug resistance protein 3450833 10065459 Rpdx1_3230 Rhodopseudomonas palustris DX-1 small multidrug resistance protein YP_004109542.1 3450519 D 652103 CDS YP_004109543.1 316934561 10065460 complement(3450870..3451880) 1 NC_014834.1 PFAM: phosphate transporter; KEGG: nwi:Nwi_2031 phosphate transporter; phosphate transporter 3451880 10065460 Rpdx1_3231 Rhodopseudomonas palustris DX-1 phosphate transporter YP_004109543.1 3450870 R 652103 CDS YP_004109544.1 316934562 10065461 complement(3451895..3452539) 1 NC_014834.1 PFAM: Putitive phosphate transport regulator; KEGG: bbt:BBta_3760 putative low-affinity phosphate transport accessory protein; putative phosphate transport regulator 3452539 10065461 Rpdx1_3232 Rhodopseudomonas palustris DX-1 putative phosphate transport regulator YP_004109544.1 3451895 R 652103 CDS YP_004109545.1 316934563 10065462 3453105..3455756 1 NC_014834.1 KEGG: pcs:Pc22g03720 Pc22g03720; hypothetical protein 3455756 10065462 Rpdx1_3233 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109545.1 3453105 D 652103 CDS YP_004109546.1 316934564 10065463 complement(3455914..3456885) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_3759 hypothetical protein; inner-membrane translocator 3456885 10065463 Rpdx1_3234 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004109546.1 3455914 R 652103 CDS YP_004109547.1 316934565 10065464 complement(3456887..3457762) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bra:BRADO3733 putative ABC transporter, permease protein; putative branched-chain amino acid transport permease; inner-membrane translocator 3457762 10065464 Rpdx1_3235 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004109547.1 3456887 R 652103 CDS YP_004109548.1 316934566 10065465 complement(3457802..3458548) 1 NC_014834.1 KEGG: nha:Nham_1673 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3458548 10065465 Rpdx1_3236 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109548.1 3457802 R 652103 CDS YP_004109549.1 316934567 10065466 complement(3458541..3459311) 1 NC_014834.1 KEGG: bja:blr4037 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3459311 10065466 Rpdx1_3237 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109549.1 3458541 R 652103 CDS YP_004109550.1 316934568 10065467 complement(3459517..3459864) 1 NC_014834.1 PFAM: arsenate reductase and related; KEGG: nha:Nham_1671 hypothetical protein; arsenate reductase-like protein 3459864 10065467 Rpdx1_3238 Rhodopseudomonas palustris DX-1 arsenate reductase-like protein YP_004109550.1 3459517 R 652103 CDS YP_004109551.1 316934569 10065468 3460081..3461595 1 NC_014834.1 KEGG: rce:RC1_2401 pyruvate kinase; PFAM: Pyruvate kinase barrel; pyruvate kinase 3461595 10065468 Rpdx1_3239 Rhodopseudomonas palustris DX-1 pyruvate kinase YP_004109551.1 3460081 D 652103 CDS YP_004109552.1 316934570 10065470 3462126..3462275 1 NC_014834.1 KEGG: bpt:Bpet2957 hypothetical protein; hypothetical protein 3462275 10065470 Rpdx1_3241 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109552.1 3462126 D 652103 CDS YP_004109553.1 316934571 10065471 3462453..3464255 1 NC_014834.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: atc:AGR_L_284 flavin-containing monooxygenase, putative; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3464255 10065471 Rpdx1_3242 Rhodopseudomonas palustris DX-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004109553.1 3462453 D 652103 CDS YP_004109554.1 316934572 10065472 3464361..3464639 1 NC_014834.1 KEGG: nwi:Nwi_3083 transcriptional regulator AbrB; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; AbrB family transcriptional regulator 3464639 10065472 Rpdx1_3243 Rhodopseudomonas palustris DX-1 AbrB family transcriptional regulator YP_004109554.1 3464361 D 652103 CDS YP_004109555.1 316934573 10065473 complement(3464682..3465242) 1 NC_014834.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bbt:BBta_7416 hypothetical protein; flavin reductase FMN-binding protein 3465242 10065473 Rpdx1_3244 Rhodopseudomonas palustris DX-1 flavin reductase FMN-binding protein YP_004109555.1 3464682 R 652103 CDS YP_004109556.1 316934574 10065474 complement(3465306..3465749) 1 NC_014834.1 KEGG: azl:AZL_a04400 hypothetical protein; hypothetical protein 3465749 10065474 Rpdx1_3245 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109556.1 3465306 R 652103 CDS YP_004109557.1 316934575 10065475 3466195..3466986 1 NC_014834.1 KEGG: pde:Pden_3149 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 3466986 10065475 Rpdx1_3246 Rhodopseudomonas palustris DX-1 phytanoyl-CoA dioxygenase YP_004109557.1 3466195 D 652103 CDS YP_004109558.1 316934576 10065476 3467162..3467713 1 NC_014834.1 KEGG: rce:RC1_3304 hypothetical protein; hypothetical protein 3467713 10065476 Rpdx1_3247 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109558.1 3467162 D 652103 CDS YP_004109559.1 316934577 10065477 complement(3467796..3468200) 1 NC_014834.1 KEGG: azc:AZC_1293 hypothetical protein; hypothetical protein 3468200 10065477 Rpdx1_3248 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109559.1 3467796 R 652103 CDS YP_004109560.1 316934578 10065478 complement(3468232..3468627) 1 NC_014834.1 KEGG: rsp:RSP_4279 hypothetical protein; hypothetical protein 3468627 10065478 Rpdx1_3249 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109560.1 3468232 R 652103 CDS YP_004109561.1 316934579 10065479 3468781..3469665 1 NC_014834.1 KEGG: azc:AZC_1291 transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3469665 10065479 Rpdx1_3250 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004109561.1 3468781 D 652103 CDS YP_004109562.1 316934580 10065480 3469769..3470965 1 NC_014834.1 KEGG: oan:Oant_4810 sodium/glutamate symporter; TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; sodium/glutamate symporter 3470965 10065480 Rpdx1_3251 Rhodopseudomonas palustris DX-1 sodium/glutamate symporter YP_004109562.1 3469769 D 652103 CDS YP_004109563.1 316934581 10065482 complement(3471268..3471879) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: vap:Vapar_6173 transcriptional regulator, TetR family; TetR family transcriptional regulator 3471879 10065482 Rpdx1_3253 Rhodopseudomonas palustris DX-1 TetR family transcriptional regulator YP_004109563.1 3471268 R 652103 CDS YP_004109564.1 316934582 10065483 3472005..3472907 1 NC_014834.1 KEGG: ara:Arad_0941 hypothetical protein; hypothetical protein 3472907 10065483 Rpdx1_3254 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109564.1 3472005 D 652103 CDS YP_004109565.1 316934583 10065484 complement(3473351..3474400) 1 NC_014834.1 KEGG: sto:ST0052 hypothetical protein; hypothetical protein 3474400 10065484 Rpdx1_3255 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109565.1 3473351 R 652103 CDS YP_004109566.1 316934584 10065485 complement(3474397..3475053) 1 NC_014834.1 KEGG: xca:xccb100_4359 hypothetical protein; hypothetical protein 3475053 10065485 Rpdx1_3256 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109566.1 3474397 R 652103 CDS YP_004109567.1 316934585 10065486 complement(3475127..3475747) 1 NC_014834.1 PFAM: RES domain protein; KEGG: mes:Meso_4398 hypothetical protein; RES domain-containing protein 3475747 10065486 Rpdx1_3257 Rhodopseudomonas palustris DX-1 RES domain-containing protein YP_004109567.1 3475127 R 652103 CDS YP_004109568.1 316934586 10065487 complement(3475748..3476509) 1 NC_014834.1 KEGG: mno:Mnod_8614 hypothetical protein; hypothetical protein 3476509 10065487 Rpdx1_3258 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109568.1 3475748 R 652103 CDS YP_004109569.1 316934587 10065489 complement(3478533..3479918) 1 NC_014834.1 KEGG: tau:Tola_2435 hypothetical protein; hypothetical protein 3479918 10065489 Rpdx1_3260 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109569.1 3478533 R 652103 CDS YP_004109570.1 316934588 10065490 complement(3480538..3481218) 1 NC_014834.1 KEGG: aca:ACP_3268 hypothetical protein; hypothetical protein 3481218 10065490 Rpdx1_3261 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109570.1 3480538 R 652103 CDS YP_004109571.1 316934589 10065491 3482816..3483802 1 NC_014834.1 KEGG: bbt:BBta_2306 AraC/XylS family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3483802 10065491 Rpdx1_3262 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004109571.1 3482816 D 652103 CDS YP_004109572.1 316934590 10065493 3484510..3485844 1 NC_014834.1 PFAM: transposase IS4 family protein; KEGG: nha:Nham_2758 transposase, IS4; transposase IS4 family protein 3485844 10065493 Rpdx1_3264 Rhodopseudomonas palustris DX-1 transposase IS4 family protein YP_004109572.1 3484510 D 652103 CDS YP_004109573.1 316934591 10065494 complement(3486020..3486661) 1 NC_014834.1 KEGG: bja:bll7081 two-component response regulator; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; LuxR family two component transcriptional regulator 3486661 10065494 Rpdx1_3265 Rhodopseudomonas palustris DX-1 LuxR family two component transcriptional regulator YP_004109573.1 3486020 R 652103 CDS YP_004109574.1 316934592 10065495 complement(3487584..3487946) 1 NC_014834.1 PFAM: protein of unknown function DUF937; KEGG: bra:BRADO4558 hypothetical protein; hypothetical protein 3487946 10065495 Rpdx1_3266 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109574.1 3487584 R 652103 CDS YP_004109575.1 316934593 10065496 3488812..3489222 1 NC_014834.1 KEGG: mrd:Mrad2831_1030 large conductance mechanosensitive channel protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein 3489222 10065496 Rpdx1_3267 Rhodopseudomonas palustris DX-1 large conductance mechanosensitive channel protein YP_004109575.1 3488812 D 652103 CDS YP_004109576.1 316934594 10065497 complement(3489773..3489955) 1 NC_014834.1 KEGG: dth:DICTH_1205 DNA repair protein RecO; hypothetical protein 3489955 10065497 Rpdx1_3268 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109576.1 3489773 R 652103 CDS YP_004109577.1 316934595 10065498 complement(3490123..3492108) 1 NC_014834.1 KEGG: bja:blr2546 putative chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 3492108 10065498 Rpdx1_3269 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004109577.1 3490123 R 652103 CDS YP_004109578.1 316934596 10065499 complement(3492254..3493567) 1 NC_014834.1 KEGG: mag:amb3899 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3493567 10065499 Rpdx1_3270 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004109578.1 3492254 R 652103 CDS YP_004109579.1 316934597 10065500 complement(3494168..3496318) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: bbt:BBta_1536 methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 3496318 10065500 Rpdx1_3271 Rhodopseudomonas palustris DX-1 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_004109579.1 3494168 R 652103 CDS YP_004109580.1 316934598 10065502 complement(3498369..3498608) 1 NC_014834.1 PFAM: Protein of unknown function DUF2274; KEGG: xau:Xaut_0739 hypothetical protein; hypothetical protein 3498608 10065502 Rpdx1_3273 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109580.1 3498369 R 652103 CDS YP_004109581.1 316934599 10065503 complement(3498618..3499826) 1 NC_014834.1 PFAM: conjugation TrbI family protein; KEGG: bja:blr1620 conjugal transfer protein; conjugation TrbI family protein 3499826 10065503 Rpdx1_3274 Rhodopseudomonas palustris DX-1 conjugation TrbI family protein YP_004109581.1 3498618 R 652103 CDS YP_004109582.1 316934600 10065504 complement(3499823..3500821) 1 NC_014834.1 KEGG: bbt:BBta_7448 putative conjugal transfer protein TrbG; TIGRFAM: P-type conjugative transfer protein TrbG; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; P-type conjugative transfer protein TrbG 3500821 10065504 Rpdx1_3275 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbG YP_004109582.1 3499823 R 652103 CDS YP_004109583.1 316934601 10065505 complement(3500818..3501501) 1 NC_014834.1 KEGG: bja:blr1618 conjugal transfer protein TrbF; conjugal transfer protein TrbF 3501501 10065505 Rpdx1_3276 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbF YP_004109583.1 3500818 R 652103 CDS YP_004109584.1 316934602 10065506 complement(3501501..3502742) 1 NC_014834.1 KEGG: bbt:BBta_1505 conjugal transfer protein TrbL; TIGRFAM: P-type conjugative transfer protein TrbL; PFAM: TrbL/VirB6 plasmid conjugal transfer protein; P-type conjugative transfer protein TrbL 3502742 10065506 Rpdx1_3277 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbL YP_004109584.1 3501501 R 652103 CDS YP_004109585.1 316934603 10065507 complement(3502742..3503110) 1 NC_014834.1 KEGG: bbt:BBta_3369 hypothetical protein; hypothetical protein 3503110 10065507 Rpdx1_3278 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109585.1 3502742 R 652103 CDS YP_004109586.1 316934604 10065508 complement(3503107..3503844) 1 NC_014834.1 TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: bbt:BBta_3368 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ 3503844 10065508 Rpdx1_3279 Rhodopseudomonas palustris DX-1 P-type conjugative transfer protein TrbJ YP_004109586.1 3503107 R 652103 CDS YP_004109587.1 316934605 10065509 complement(3503841..3506282) 1 NC_014834.1 KEGG: bbt:BBta_3367 conjugal transfer ATPase TrbE; PFAM: CagE, TrbE, VirB component of type IV transporter system, conserved region; SMART: AAA ATPase; type IV transporter subunit CagE/TrbE/VirB 3506282 10065509 Rpdx1_3280 Rhodopseudomonas palustris DX-1 type IV transporter subunit CagE/TrbE/VirB YP_004109587.1 3503841 R 652103 CDS YP_004109588.1 316934606 10065510 complement(3506292..3506573) 1 NC_014834.1 KEGG: oan:Oant_3214 conjugal transfer protein TrbB; conjugal transfer protein TrbB 3506573 10065510 Rpdx1_3281 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbB YP_004109588.1 3506292 R 652103 CDS YP_004109589.1 316934607 10065511 complement(3506573..3506902) 1 NC_014834.1 PFAM: Conjugal transfer protein TrbC; KEGG: bbt:BBta_7742 conjugal transfer protein TrbC precursor; conjugal transfer protein TrbC 3506902 10065511 Rpdx1_3282 Rhodopseudomonas palustris DX-1 conjugal transfer protein TrbC YP_004109589.1 3506573 R 652103 CDS YP_004109590.1 316934608 10065512 complement(3506899..3507897) 1 NC_014834.1 KEGG: bbt:BBta_7741 conjugal transfer protein TrbB; TIGRFAM: P-type conjugative transfer ATPase TrbB; PFAM: type II secretion system protein E; P-type conjugative transfer ATPase TrbB 3507897 10065512 Rpdx1_3283 Rhodopseudomonas palustris DX-1 P-type conjugative transfer ATPase TrbB YP_004109590.1 3506899 R 652103 CDS YP_004109591.1 316934609 10065514 complement(3508786..3510006) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pst:PSPTO_1004 GGDEF domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 3510006 10065514 Rpdx1_3285 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004109591.1 3508786 R 652103 CDS YP_004109592.1 316934610 10065515 complement(3510362..3512035) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: bbt:BBta_2308 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; PAS domain containing protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 3512035 10065515 Rpdx1_3286 Rhodopseudomonas palustris DX-1 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_004109592.1 3510362 R 652103 CDS YP_004109593.1 316934611 10065516 complement(3512495..3513199) 1 NC_014834.1 KEGG: xal:XALc_0354 probable biotin synthase protein; hypothetical protein 3513199 10065516 Rpdx1_3287 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109593.1 3512495 R 652103 CDS YP_004109594.1 316934612 10065517 complement(3513709..3514917) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll3855 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3514917 10065517 Rpdx1_3288 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004109594.1 3513709 R 652103 CDS YP_004109595.1 316934613 10065518 complement(3515067..3516602) 1 NC_014834.1 KEGG: mlo:mll1722 ATP-binding protein of sugar ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3516602 10065518 Rpdx1_3289 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109595.1 3515067 R 652103 CDS YP_004109596.1 316934614 10065520 complement(3517708..3519876) 1 NC_014834.1 PFAM: inner-membrane translocator; Strictosidine synthase, conserved region; KEGG: bja:blr7869 ABC transporter permease protein; inner-membrane translocator 3519876 10065520 Rpdx1_3291 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004109596.1 3517708 R 652103 CDS YP_004109597.1 316934615 10065521 complement(3519951..3520973) 1 NC_014834.1 KEGG: vei:Veis_3291 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 3520973 10065521 Rpdx1_3292 Rhodopseudomonas palustris DX-1 ABC transporter substrate-binding protein YP_004109597.1 3519951 R 652103 CDS YP_004109598.1 316934616 10065522 complement(3521034..3521972) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: vei:Veis_3290 inner-membrane translocator; inner-membrane translocator 3521972 10065522 Rpdx1_3293 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004109598.1 3521034 R 652103 CDS YP_004109599.1 316934617 10065523 3522199..3522915 1 NC_014834.1 KEGG: mno:Mnod_3745 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3522915 10065523 Rpdx1_3294 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004109599.1 3522199 D 652103 CDS YP_004109600.1 316934618 10065524 complement(3523176..3523589) 1 NC_014834.1 manually curated; KEGG: bbt:BBta_3357 hypothetical protein; hypothetical protein 3523589 10065524 Rpdx1_3295 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109600.1 3523176 R 652103 CDS YP_004109601.1 316934619 10065525 complement(3523600..3525603) 1 NC_014834.1 PFAM: TRAG family protein; KEGG: bbt:BBta_3356 conjugal transfer coupling protein TraG; TRAG family protein 3525603 10065525 Rpdx1_3296 Rhodopseudomonas palustris DX-1 TRAG family protein YP_004109601.1 3523600 R 652103 CDS YP_004109602.1 316934620 10065526 complement(3525729..3527480) 1 NC_014834.1 KEGG: bbt:BBta_3351 hypothetical protein; hypothetical protein 3527480 10065526 Rpdx1_3297 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109602.1 3525729 R 652103 CDS YP_004109603.1 316934621 10065527 complement(3528016..3529104) 1 NC_014834.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: xau:Xaut_4009 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 3529104 10065527 Rpdx1_3298 Rhodopseudomonas palustris DX-1 transposase IS116/IS110/IS902 family protein YP_004109603.1 3528016 R 652103 CDS YP_004109604.1 316934622 10065528 complement(3529310..3530209) 1 NC_014834.1 PFAM: Lytic transglycosylase catalytic; KEGG: bbt:BBta_3350 putative lytic transglycosylase; lytic transglycosylase 3530209 10065528 Rpdx1_3299 Rhodopseudomonas palustris DX-1 lytic transglycosylase YP_004109604.1 3529310 R 652103 CDS YP_004109605.1 316934623 10065529 complement(3530218..3530733) 1 NC_014834.1 PFAM: Peptidase S26, conserved region; KEGG: bbt:BBta_7435 putative conjugal transfer protein precursor; peptidase S26 3530733 10065529 Rpdx1_3300 Rhodopseudomonas palustris DX-1 peptidase S26 YP_004109605.1 3530218 R 652103 CDS YP_004109606.1 316934624 10065530 complement(3530730..3531194) 1 NC_014834.1 KEGG: xau:Xaut_4012 hypothetical protein; hypothetical protein 3531194 10065530 Rpdx1_3301 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109606.1 3530730 R 652103 CDS YP_004109607.1 316934625 10065531 complement(3531507..3532388) 1 NC_014834.1 PFAM: Replication initiator protein A; KEGG: bbt:BBta_3347 putative replication protein A; replication initiator protein A 3532388 10065531 Rpdx1_3302 Rhodopseudomonas palustris DX-1 replication initiator protein A YP_004109607.1 3531507 R 652103 CDS YP_004109608.1 316934626 10065532 complement(3532412..3532696) 1 NC_014834.1 KEGG: bbt:BBta_3346 hypothetical protein; hypothetical protein 3532696 10065532 Rpdx1_3303 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109608.1 3532412 R 652103 CDS YP_004109609.1 316934627 10065533 complement(3532823..3533458) 1 NC_014834.1 manually curated; KEGG: bbt:BBta_1487 hypothetical protein; hypothetical protein 3533458 10065533 Rpdx1_3304 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109609.1 3532823 R 652103 CDS YP_004109610.1 316934628 10065534 complement(3533760..3534038) 1 NC_014834.1 KEGG: bbt:BBta_3343 hypothetical protein; hypothetical protein 3534038 10065534 Rpdx1_3305 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109610.1 3533760 R 652103 CDS YP_004109611.1 316934629 10065535 3534181..3534441 1 NC_014834.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: oan:Oant_1848 XRE family transcriptional regulator; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3534441 10065535 Rpdx1_3306 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004109611.1 3534181 D 652103 CDS YP_004109612.1 316934630 10065536 complement(3534573..3534896) 1 NC_014834.1 PFAM: protein of unknown function DUF736; KEGG: bbt:BBta_7420 hypothetical protein; hypothetical protein 3534896 10065536 Rpdx1_3307 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109612.1 3534573 R 652103 CDS YP_004109613.1 316934631 10065537 3535006..3535650 1 NC_014834.1 KEGG: mgr:MGG_04575 hypothetical protein; hypothetical protein 3535650 10065537 Rpdx1_3308 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109613.1 3535006 D 652103 CDS YP_004109614.1 316934632 10065539 complement(3536124..3537278) 1 NC_014834.1 PFAM: Protein of unknown function DUF2493; KEGG: bbt:BBta_7415 hypothetical protein; hypothetical protein 3537278 10065539 Rpdx1_3310 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109614.1 3536124 R 652103 CDS YP_004109615.1 316934633 10065540 complement(3537392..3538393) 1 NC_014834.1 manually curated; KEGG: bbt:BBta_7414 hypothetical protein; hypothetical protein 3538393 10065540 Rpdx1_3311 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109615.1 3537392 R 652103 CDS YP_004109616.1 316934634 10065541 complement(3538424..3542779) 1 NC_014834.1 KEGG: gdj:Gdia_2784 putative methylase/helicase; putative methylase/helicase 3542779 10065541 Rpdx1_3312 Rhodopseudomonas palustris DX-1 putative methylase/helicase YP_004109616.1 3538424 R 652103 CDS YP_004109617.1 316934635 10065542 complement(3542927..3545035) 1 NC_014834.1 KEGG: gdj:Gdia_2781 ParB domain protein nuclease; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; ParB domain-containing protein nuclease 3545035 10065542 Rpdx1_3313 Rhodopseudomonas palustris DX-1 ParB domain-containing protein nuclease YP_004109617.1 3542927 R 652103 CDS YP_004109618.1 316934636 10065543 complement(3545118..3546107) 1 NC_014834.1 PFAM: domain of unknown function DUF1738; KEGG: bbt:BBta_7394 putative ArdC antirestriction protein; hypothetical protein 3546107 10065543 Rpdx1_3314 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109618.1 3545118 R 652103 CDS YP_004109619.1 316934637 10065544 3546367..3546663 1 NC_014834.1 PFAM: Prophage CP4-57 regulatory; KEGG: nwi:Nwi_2141 prophage CP4-57 regulatory; prophage CP4-57 regulatory 3546663 10065544 Rpdx1_3315 Rhodopseudomonas palustris DX-1 prophage CP4-57 regulatory YP_004109619.1 3546367 D 652103 CDS YP_004109620.1 316934638 10065545 complement(3546617..3547873) 1 NC_014834.1 PFAM: integrase family protein; KEGG: azl:AZL_011700 phage integrase; integrase family protein 3547873 10065545 Rpdx1_3316 Rhodopseudomonas palustris DX-1 integrase family protein YP_004109620.1 3546617 R 652103 CDS YP_004109621.1 316934639 10065546 complement(3548164..3549786) 1 NC_014834.1 KEGG: nwi:Nwi_2143 GMP synthase; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; GMP synthase large subunit 3549786 10065546 Rpdx1_3317 Rhodopseudomonas palustris DX-1 GMP synthase large subunit YP_004109621.1 3548164 R 652103 CDS YP_004109622.1 316934640 10065547 complement(3550033..3551331) 1 NC_014834.1 PFAM: Fmu (Sun) domain protein; KEGG: bja:blr3985 Sun protein; Fmu (Sun) domain-containing protein 3551331 10065547 Rpdx1_3318 Rhodopseudomonas palustris DX-1 Fmu (Sun) domain-containing protein YP_004109622.1 3550033 R 652103 CDS YP_004109623.1 316934641 10065548 complement(3551521..3552546) 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: bbt:BBta_3611 putative NADP-dependent oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 3552546 10065548 Rpdx1_3319 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004109623.1 3551521 R 652103 CDS YP_004109624.1 316934642 10065549 complement(3552795..3554291) 1 NC_014834.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: bbt:BBta_3610 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; inosine-5'-monophosphate dehydrogenase 3554291 10065549 Rpdx1_3320 Rhodopseudomonas palustris DX-1 inosine-5'-monophosphate dehydrogenase YP_004109624.1 3552795 R 652103 CDS YP_004109625.1 316934643 10065550 complement(3554655..3554903) 1 NC_014834.1 KEGG: nwi:Nwi_2147 hypothetical protein; hypothetical protein 3554903 10065550 Rpdx1_3321 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109625.1 3554655 R 652103 CDS YP_004109626.1 316934644 10065551 3555097..3556569 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3608 putative multidrug efflux protein; major facilitator superfamily protein 3556569 10065551 Rpdx1_3322 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004109626.1 3555097 D 652103 CDS YP_004109627.1 316934645 10065552 complement(3556600..3556776) 1 NC_014834.1 hypothetical protein 3556776 10065552 Rpdx1_3323 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109627.1 3556600 R 652103 CDS YP_004109628.1 316934646 10065553 complement(3556936..3557649) 1 NC_014834.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: oca:OCAR_6472 ribosomal RNA large subunit methyltransferase J; ribosomal RNA methyltransferase RrmJ/FtsJ 3557649 10065553 Rpdx1_3324 Rhodopseudomonas palustris DX-1 ribosomal RNA methyltransferase RrmJ/FtsJ YP_004109628.1 3556936 R 652103 CDS YP_004109629.1 316934647 10065554 3557846..3558421 1 NC_014834.1 KEGG: avi:Avi_2601 hypothetical protein; hypothetical protein 3558421 10065554 Rpdx1_3325 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109629.1 3557846 D 652103 CDS YP_004109630.1 316934648 10065555 complement(3558451..3559518) 1 NC_014834.1 PFAM: Ppx/GppA phosphatase; KEGG: bja:blr3969 exopolyphosphatase; Ppx/GppA phosphatase 3559518 10065555 Rpdx1_3326 Rhodopseudomonas palustris DX-1 Ppx/GppA phosphatase YP_004109630.1 3558451 R 652103 CDS YP_004109631.1 316934649 10065556 3559758..3562133 1 NC_014834.1 KEGG: bja:bll3968 carbon monoxide dehydrogenase large chain; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; carbon-monoxide dehydrogenase 3562133 10065556 Rpdx1_3327 Rhodopseudomonas palustris DX-1 carbon-monoxide dehydrogenase YP_004109631.1 3559758 D 652103 CDS YP_004109632.1 316934650 10065557 complement(3562306..3563520) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_5091 putative branched-chain amino acid ABC transporter, substrate-binding protein; extracellular ligand-binding receptor 3563520 10065557 Rpdx1_3328 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004109632.1 3562306 R 652103 CDS YP_004109633.1 316934651 10065558 complement(3563712..3564512) 1 NC_014834.1 KEGG: bbt:BBta_3593 hypothetical protein; hypothetical protein 3564512 10065558 Rpdx1_3329 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109633.1 3563712 R 652103 CDS YP_004109634.1 316934652 10065559 3564615..3565091 1 NC_014834.1 PFAM: protein of unknown function DUF188; KEGG: bja:bll3966 hypothetical protein; hypothetical protein 3565091 10065559 Rpdx1_3330 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109634.1 3564615 D 652103 CDS YP_004109635.1 316934653 10065560 3565102..3566919 1 NC_014834.1 KEGG: nha:Nham_2552 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3566919 10065560 Rpdx1_3331 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109635.1 3565102 D 652103 CDS YP_004109636.1 316934654 10065561 3567099..3568181 1 NC_014834.1 PFAM: alanine racemase domain protein; KEGG: bra:BRADO3145 putative amino acid processing enzyme-related protein (aldolase or racemase); alanine racemase domain-containing protein 3568181 10065561 Rpdx1_3332 Rhodopseudomonas palustris DX-1 alanine racemase domain-containing protein YP_004109636.1 3567099 D 652103 CDS YP_004109637.1 316934655 10065562 complement(3568294..3569526) 1 NC_014834.1 PFAM: HI0933 family protein; KEGG: bra:BRADO3144 putative signal peptide; hypothetical protein 3569526 10065562 Rpdx1_3333 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109637.1 3568294 R 652103 CDS YP_004109638.1 316934656 10065563 complement(3569878..3570795) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_3584 putative 3-oxo-(acyl) acyl carrier protein reductase; short-chain dehydrogenase/reductase SDR 3570795 10065563 Rpdx1_3334 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004109638.1 3569878 R 652103 CDS YP_004109639.1 316934657 10065564 complement(3570814..3571281) 1 NC_014834.1 PFAM: MaoC domain protein dehydratase; KEGG: nha:Nham_2554 MaoC-like dehydratase; MaoC domain-containing protein dehydratase 3571281 10065564 Rpdx1_3335 Rhodopseudomonas palustris DX-1 MaoC domain-containing protein dehydratase YP_004109639.1 3570814 R 652103 CDS YP_004109640.1 316934658 10065565 complement(3571373..3572347) 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bbt:BBta_5263 putative oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 3572347 10065565 Rpdx1_3336 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004109640.1 3571373 R 652103 CDS YP_004109641.1 316934659 10065566 complement(3572347..3572967) 1 NC_014834.1 PFAM: DSBA oxidoreductase; KEGG: bja:bll5606 putative 2-hydroxychromene-2-carboxylate isomerase; DSBA oxidoreductase 3572967 10065566 Rpdx1_3337 Rhodopseudomonas palustris DX-1 DSBA oxidoreductase YP_004109641.1 3572347 R 652103 CDS YP_004109642.1 316934660 10065567 complement(3573086..3573805) 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bja:bll5607 glutathione S-transferase; glutathione S-transferase domain-containing protein 3573805 10065567 Rpdx1_3338 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004109642.1 3573086 R 652103 CDS YP_004109643.1 316934661 10065568 3573938..3574960 1 NC_014834.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: bra:BRADO2911 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; vitamin-B12 independent methionine synthase 3574960 10065568 Rpdx1_3339 Rhodopseudomonas palustris DX-1 vitamin-B12 independent methionine synthase YP_004109643.1 3573938 D 652103 CDS YP_004109644.1 316934662 10065569 complement(3575168..3575842) 1 NC_014834.1 KEGG: nha:Nham_2589 hypothetical protein; hypothetical protein 3575842 10065569 Rpdx1_3340 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109644.1 3575168 R 652103 CDS YP_004109645.1 316934663 10065570 complement(3576125..3576646) 1 NC_014834.1 KEGG: bja:bll5610 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; Xanthine phosphoribosyltransferase 3576646 10065570 Rpdx1_3341 Rhodopseudomonas palustris DX-1 Xanthine phosphoribosyltransferase YP_004109645.1 3576125 R 652103 CDS YP_004109646.1 316934664 10065571 complement(3576805..3577542) 1 NC_014834.1 PFAM: molybdopterin binding domain; KEGG: bbt:BBta_5271 hypothetical protein; molybdopterin-binding domain 3577542 10065571 Rpdx1_3342 Rhodopseudomonas palustris DX-1 molybdopterin-binding domain YP_004109646.1 3576805 R 652103 CDS YP_004109647.1 316934665 10065572 3577760..3579178 1 NC_014834.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: bbt:BBta_5273 hypothetical protein; hypothetical protein 3579178 10065572 Rpdx1_3343 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109647.1 3577760 D 652103 CDS YP_004109648.1 316934666 10065573 3579418..3580362 1 NC_014834.1 PFAM: protein of unknown function DUF403; KEGG: bra:BRADO2904 hypothetical protein; hypothetical protein 3580362 10065573 Rpdx1_3344 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109648.1 3579418 D 652103 CDS YP_004109649.1 316934667 10065574 3580414..3581241 1 NC_014834.1 KEGG: bja:blr5614 hypothetical protein; PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; transglutaminase domain-containing protein 3581241 10065574 Rpdx1_3345 Rhodopseudomonas palustris DX-1 transglutaminase domain-containing protein YP_004109649.1 3580414 D 652103 CDS YP_004109650.1 316934668 10065575 3581353..3582099 1 NC_014834.1 PFAM: 20S proteasome A and B subunits; KEGG: bja:blr5617 hypothetical protein; 20S proteasome subunits A/B 3582099 10065575 Rpdx1_3346 Rhodopseudomonas palustris DX-1 20S proteasome subunits A/B YP_004109650.1 3581353 D 652103 CDS YP_004109651.1 316934669 10065576 3582311..3582880 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_2393 hypothetical protein; N-acetyltransferase GCN5 3582880 10065576 Rpdx1_3347 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004109651.1 3582311 D 652103 CDS YP_004109652.1 316934670 10065577 3583003..3584190 1 NC_014834.1 KEGG: mlo:mlr0003 hypothetical protein; hypothetical protein 3584190 10065577 Rpdx1_3348 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109652.1 3583003 D 652103 CDS YP_004109653.1 316934671 10065578 3584271..3585029 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr5618 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 3585029 10065578 Rpdx1_3349 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004109653.1 3584271 D 652103 CDS YP_004109654.1 316934672 10065579 3585201..3585620 1 NC_014834.1 PFAM: Proteinase inhibitor I42, chagasin; KEGG: mma:MM_0269 hypothetical protein; proteinase inhibitor I42, chagasin 3585620 10065579 Rpdx1_3350 Rhodopseudomonas palustris DX-1 proteinase inhibitor I42, chagasin YP_004109654.1 3585201 D 652103 CDS YP_004109655.1 316934673 10065580 complement(3585628..3586125) 1 NC_014834.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: mrb:Mrub_0901 cupin 2 conserved barrel domain-containing protein; cupin 3586125 10065580 Rpdx1_3351 Rhodopseudomonas palustris DX-1 cupin YP_004109655.1 3585628 R 652103 CDS YP_004109656.1 316934674 10065581 complement(3586115..3587215) 1 NC_014834.1 PFAM: ribulose bisphosphate carboxylase large chain; KEGG: rru:Rru_A1998 ribulose 1,5-bisphosphate carboxylase large subunit; RuBisCO-like protein 3587215 10065581 Rpdx1_3352 Rhodopseudomonas palustris DX-1 RuBisCO-like protein YP_004109656.1 3586115 R 652103 CDS YP_004109657.1 316934675 10065582 3587395..3588645 1 NC_014834.1 PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; KEGG: bja:blr5621 hypothetical protein; Na+ dependent nucleoside transporter domain-containing protein 3588645 10065582 Rpdx1_3353 Rhodopseudomonas palustris DX-1 Na+ dependent nucleoside transporter domain-containing protein YP_004109657.1 3587395 D 652103 CDS YP_004109658.1 316934676 10065583 3588892..3590583 1 NC_014834.1 KEGG: rcu:RCOM_1844190 hypothetical protein; hypothetical protein 3590583 10065583 Rpdx1_3354 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109658.1 3588892 D 652103 CDS YP_004109659.1 316934677 10065584 complement(3590704..3591405) 1 NC_014834.1 KEGG: vei:Veis_2854 hypothetical protein; hypothetical protein 3591405 10065584 Rpdx1_3355 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109659.1 3590704 R 652103 CDS YP_004109660.1 316934678 10065585 complement(3591406..3591669) 1 NC_014834.1 KEGG: ach:Achl_4618 6-phosphofructokinase; hypothetical protein 3591669 10065585 Rpdx1_3356 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109660.1 3591406 R 652103 CDS YP_004109661.1 316934679 10065586 complement(3591746..3592030) 1 NC_014834.1 PFAM: Usg family protein; KEGG: nha:Nham_2592 hypothetical protein; Usg family protein 3592030 10065586 Rpdx1_3357 Rhodopseudomonas palustris DX-1 Usg family protein YP_004109661.1 3591746 R 652103 CDS YP_004109662.1 316934680 10065587 3592474..3592788 1 NC_014834.1 PFAM: Chaperonin Cpn10; KEGG: bra:BRADO2893 co-chaperonin GroES; chaperonin Cpn10 3592788 10065587 Rpdx1_3358 Rhodopseudomonas palustris DX-1 chaperonin Cpn10 YP_004109662.1 3592474 D 652103 CDS YP_004109663.1 316934681 10065588 3592941..3594581 1 NC_014834.1 KEGG: bbt:BBta_5285 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; chaperonin GroEL 3594581 10065588 Rpdx1_3359 Rhodopseudomonas palustris DX-1 chaperonin GroEL YP_004109663.1 3592941 D 652103 CDS YP_004109664.1 316934682 10065589 3594729..3595010 1 NC_014834.1 PFAM: plasmid maintenance system killer; KEGG: msl:Msil_2105 plasmid maintenance system killer; plasmid maintenance system killer protein 3595010 10065589 Rpdx1_3360 Rhodopseudomonas palustris DX-1 plasmid maintenance system killer protein YP_004109664.1 3594729 D 652103 CDS YP_004109665.1 316934683 10065590 3595023..3595307 1 NC_014834.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: mpo:Mpop_2927 plasmid maintenance system antidote protein, XRE family; SMART: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 3595307 10065590 Rpdx1_3361 Rhodopseudomonas palustris DX-1 XRE family plasmid maintenance system antidote protein YP_004109665.1 3595023 D 652103 CDS YP_004109666.1 316934684 10065591 complement(3595474..3595764) 1 NC_014834.1 KEGG: rru:Rru_A3411 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 3595764 10065591 Rpdx1_3362 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004109666.1 3595474 R 652103 CDS YP_004109667.1 316934685 10065592 complement(3595788..3596081) 1 NC_014834.1 PFAM: protein of unknown function DUF891; KEGG: cak:Caul_5448 hypothetical protein; hypothetical protein 3596081 10065592 Rpdx1_3363 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109667.1 3595788 R 652103 CDS YP_004109668.1 316934686 10065593 3596222..3596917 1 NC_014834.1 KEGG: bbt:BBta_4386 transporter; TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; yecA family protein 3596917 10065593 Rpdx1_3364 Rhodopseudomonas palustris DX-1 yecA family protein YP_004109668.1 3596222 D 652103 CDS YP_004109669.1 316934687 10065594 complement(3597000..3597314) 1 NC_014834.1 KEGG: bbt:BBta_4243 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 3597314 10065594 Rpdx1_3365 Rhodopseudomonas palustris DX-1 regulatory protein ArsR YP_004109669.1 3597000 R 652103 CDS YP_004109670.1 316934688 10065595 3597404..3598153 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_4242 putative short-chain dehydrogenases/reductases (SDR) family protein; short-chain dehydrogenase/reductase SDR 3598153 10065595 Rpdx1_3366 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004109670.1 3597404 D 652103 CDS YP_004109671.1 316934689 10065596 complement(3598790..3599122) 1 NC_014834.1 KEGG: oca:OCAR_5493 hypothetical protein; hypothetical protein 3599122 10065596 Rpdx1_3367 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109671.1 3598790 R 652103 CDS YP_004109672.1 316934690 10065597 complement(3599256..3600452) 1 NC_014834.1 KEGG: bra:BRADO2881 hypothetical protein; hypothetical protein 3600452 10065597 Rpdx1_3368 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109672.1 3599256 R 652103 CDS YP_004109673.1 316934691 10065598 3600849..3601127 1 NC_014834.1 KEGG: bid:Bind_2047 hypothetical protein; hypothetical protein 3601127 10065598 Rpdx1_3369 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109673.1 3600849 D 652103 CDS YP_004109674.1 316934692 10065599 complement(3601147..3601842) 1 NC_014834.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rlt:Rleg2_5933 protein of unknown function DUF899 thioredoxin family protein; hypothetical protein 3601842 10065599 Rpdx1_3370 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109674.1 3601147 R 652103 CDS YP_004109675.1 316934693 10065600 complement(3601931..3603637) 1 NC_014834.1 KEGG: bbt:BBta_2834 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 3603637 10065600 Rpdx1_3371 Rhodopseudomonas palustris DX-1 dihydroxy-acid dehydratase YP_004109675.1 3601931 R 652103 CDS YP_004109676.1 316934694 10065601 complement(3603702..3603806) 1 NC_014834.1 hypothetical protein 3603806 10065601 Rpdx1_3372 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109676.1 3603702 R 652103 CDS YP_004109677.1 316934695 10065602 complement(3603989..3605419) 1 NC_014834.1 PFAM: Aldehyde Dehydrogenase; KEGG: bbt:BBta_2831 aldehyde dehydrogenase; aldehyde dehydrogenase 3605419 10065602 Rpdx1_3373 Rhodopseudomonas palustris DX-1 aldehyde dehydrogenase YP_004109677.1 3603989 R 652103 CDS YP_004109678.1 316934696 10065603 complement(3605664..3607685) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: oca:OCAR_6732 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase 3607685 10065603 Rpdx1_3374 Rhodopseudomonas palustris DX-1 PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase YP_004109678.1 3605664 R 652103 CDS YP_004109679.1 316934697 10065604 complement(3607883..3608953) 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bra:BRADO2478 putative transmembrane protein; hypothetical protein 3608953 10065604 Rpdx1_3375 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109679.1 3607883 R 652103 CDS YP_004109680.1 316934698 10065605 complement(3609012..3609857) 1 NC_014834.1 PFAM: aldo/keto reductase; KEGG: bja:blr2810 aldo/keto reductase; aldo/keto reductase 3609857 10065605 Rpdx1_3376 Rhodopseudomonas palustris DX-1 aldo/keto reductase YP_004109680.1 3609012 R 652103 CDS YP_004109681.1 316934699 10065606 complement(3609870..3610781) 1 NC_014834.1 KEGG: bbt:BBta_2816 putative catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; hydroxyquinol 1,2-dioxygenase 3610781 10065606 Rpdx1_3377 Rhodopseudomonas palustris DX-1 hydroxyquinol 1,2-dioxygenase YP_004109681.1 3609870 R 652103 CDS YP_004109682.1 316934700 10065607 3611014..3612282 1 NC_014834.1 PFAM: beta-lactamase; KEGG: nha:Nham_2704 beta-lactamase; beta-lactamase 3612282 10065607 Rpdx1_3378 Rhodopseudomonas palustris DX-1 beta-lactamase YP_004109682.1 3611014 D 652103 CDS YP_004109683.1 316934701 10065608 complement(3612438..3613916) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rer:RER_46870 fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 3613916 10065608 Rpdx1_3379 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004109683.1 3612438 R 652103 CDS YP_004109684.1 316934702 10065609 complement(3614133..3614912) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO5287 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 3614912 10065609 Rpdx1_3380 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004109684.1 3614133 R 652103 CDS YP_004109685.1 316934703 10065610 complement(3614922..3616892) 1 NC_014834.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: bja:blr0987 3-methylcrotonyl-CoA carboxylase alpha subunit; carbamoyl-phosphate synthase L chain ATP-binding protein 3616892 10065610 Rpdx1_3381 Rhodopseudomonas palustris DX-1 carbamoyl-phosphate synthase L chain ATP-binding protein YP_004109685.1 3614922 R 652103 CDS YP_004109686.1 316934704 10065611 complement(3616904..3618526) 1 NC_014834.1 KEGG: bbt:BBta_0675 putative carboxylase; PFAM: carboxyl transferase; methylcrotonoyl-CoA carboxylase 3618526 10065611 Rpdx1_3382 Rhodopseudomonas palustris DX-1 methylcrotonoyl-CoA carboxylase YP_004109686.1 3616904 R 652103 CDS YP_004109687.1 316934705 10065612 complement(3618707..3620311) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0674 putative fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 3620311 10065612 Rpdx1_3383 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004109687.1 3618707 R 652103 CDS YP_004109688.1 316934706 10065613 complement(3620477..3621343) 1 NC_014834.1 PFAM: protein of unknown function DUF849; KEGG: bbt:BBta_0673 hypothetical protein; hypothetical protein 3621343 10065613 Rpdx1_3384 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109688.1 3620477 R 652103 CDS YP_004109689.1 316934707 10065614 complement(3621464..3622288) 1 NC_014834.1 SMART: Helix-turn-helix, AraC domain; KEGG: bbt:BBta_0671 AraC family transcriptional regulator; helix-turn-helix domain-containing protein 3622288 10065614 Rpdx1_3385 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004109689.1 3621464 R 652103 CDS YP_004109690.1 316934708 10065615 complement(3622455..3623105) 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bja:blr0983 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein 3623105 10065615 Rpdx1_3386 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004109690.1 3622455 R 652103 CDS YP_004109691.1 316934709 10065616 complement(3623266..3624420) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO6880 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3624420 10065616 Rpdx1_3387 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004109691.1 3623266 R 652103 CDS YP_004109692.1 316934710 10065617 complement(3624556..3625695) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr0981 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3625695 10065617 Rpdx1_3388 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004109692.1 3624556 R 652103 CDS YP_004109693.1 316934711 10065618 complement(3625801..3626112) 1 NC_014834.1 KEGG: bja:blr6128 cytochrome c552; cytochrome c552 3626112 10065618 Rpdx1_3389 Rhodopseudomonas palustris DX-1 cytochrome c552 YP_004109693.1 3625801 R 652103 CDS YP_004109694.1 316934712 10065619 3626328..3628451 1 NC_014834.1 KEGG: bja:blr0516 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator receiver; integral membrane sensor hybrid histidine kinase 3628451 10065619 Rpdx1_3390 Rhodopseudomonas palustris DX-1 integral membrane sensor hybrid histidine kinase YP_004109694.1 3626328 D 652103 CDS YP_004109695.1 316934713 10065620 complement(3628500..3628952) 1 NC_014834.1 KEGG: nha:Nham_2144 hypothetical protein; hypothetical protein 3628952 10065620 Rpdx1_3391 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109695.1 3628500 R 652103 CDS YP_004109696.1 316934714 10065621 complement(3629120..3629908) 1 NC_014834.1 KEGG: bbt:BBta_1104 hypothetical protein; hypothetical protein 3629908 10065621 Rpdx1_3392 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109696.1 3629120 R 652103 CDS YP_004109697.1 316934715 10065622 complement(3629913..3631220) 1 NC_014834.1 KEGG: bra:BRADO6538 hypothetical protein; hypothetical protein 3631220 10065622 Rpdx1_3393 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109697.1 3629913 R 652103 CDS YP_004109698.1 316934716 10065624 3632288..3633094 1 NC_014834.1 PFAM: protein of unknown function DUF81; KEGG: bvi:Bcep1808_3205 hypothetical protein; hypothetical protein 3633094 10065624 Rpdx1_3395 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109698.1 3632288 D 652103 CDS YP_004109699.1 316934717 10065625 3633256..3633477 1 NC_014834.1 KEGG: bbt:BBta_2219 hypothetical protein; hypothetical protein 3633477 10065625 Rpdx1_3396 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109699.1 3633256 D 652103 CDS YP_004109700.1 316934718 10065626 complement(3633612..3633788) 1 NC_014834.1 hypothetical protein 3633788 10065626 Rpdx1_3397 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109700.1 3633612 R 652103 CDS YP_004109701.1 316934719 10065627 complement(3634036..3634887) 1 NC_014834.1 KEGG: bja:bll7071 TonB protein; TIGRFAM: TonB family protein; PFAM: TonB domain; TonB family protein 3634887 10065627 Rpdx1_3398 Rhodopseudomonas palustris DX-1 TonB family protein YP_004109701.1 3634036 R 652103 CDS YP_004109702.1 316934720 10065628 complement(3634884..3635321) 1 NC_014834.1 KEGG: bja:bll7072 biopolymer transport protein; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TonB system transport protein ExbD 3635321 10065628 Rpdx1_3399 Rhodopseudomonas palustris DX-1 TonB system transport protein ExbD YP_004109702.1 3634884 R 652103 CDS YP_004109703.1 316934721 10065629 complement(3635326..3636126) 1 NC_014834.1 KEGG: bja:bll7073 biopolymer transport protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB 3636126 10065629 Rpdx1_3400 Rhodopseudomonas palustris DX-1 tonB-system energizer ExbB YP_004109703.1 3635326 R 652103 CDS YP_004109704.1 316934722 10065630 complement(3636119..3636655) 1 NC_014834.1 PFAM: protein of unknown function DUF1008; KEGG: bja:bll7074 hypothetical protein; hypothetical protein 3636655 10065630 Rpdx1_3401 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109704.1 3636119 R 652103 CDS YP_004109705.1 316934723 10065631 complement(3636675..3637007) 1 NC_014834.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: bja:bll7075 hypothetical protein; antibiotic biosynthesis monooxygenase 3637007 10065631 Rpdx1_3402 Rhodopseudomonas palustris DX-1 antibiotic biosynthesis monooxygenase YP_004109705.1 3636675 R 652103 CDS YP_004109706.1 316934724 10065632 complement(3637085..3639421) 1 NC_014834.1 KEGG: bja:bll7076 hemin receptor precursor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent heme/hemoglobin receptor family protein 3639421 10065632 Rpdx1_3403 Rhodopseudomonas palustris DX-1 TonB-dependent heme/hemoglobin receptor family protein YP_004109706.1 3637085 R 652103 CDS YP_004109707.1 316934725 10065633 complement(3639737..3640408) 1 NC_014834.1 PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: hha:Hhal_0382 NAD-dependent epimerase/dehydratase family protein; dTDP-4-dehydrorhamnose reductase 3640408 10065633 Rpdx1_3404 Rhodopseudomonas palustris DX-1 dTDP-4-dehydrorhamnose reductase YP_004109707.1 3639737 R 652103 CDS YP_004109708.1 316934726 10065634 complement(3640396..3641751) 1 NC_014834.1 KEGG: hemN1; oxygen-independent coproporphyrinogen-III oxidase-1; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 3641751 10065634 Rpdx1_3405 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004109708.1 3640396 R 652103 CDS YP_004109709.1 316934727 10065635 3642194..3642436 1 NC_014834.1 PFAM: Hemin uptake protein hemP; KEGG: oca:OCAR_4889 hypothetical protein; hemin uptake protein HemP 3642436 10065635 Rpdx1_3406 Rhodopseudomonas palustris DX-1 hemin uptake protein HemP YP_004109709.1 3642194 D 652103 CDS YP_004109710.1 316934728 10065636 3642433..3643410 1 NC_014834.1 PFAM: periplasmic binding protein; KEGG: bja:blr7077 hemin ABC transporter hemin-binding protein; periplasmic-binding protein 3643410 10065636 Rpdx1_3407 Rhodopseudomonas palustris DX-1 periplasmic-binding protein YP_004109710.1 3642433 D 652103 CDS YP_004109711.1 316934729 10065637 3643407..3644489 1 NC_014834.1 PFAM: transport system permease protein; KEGG: nwi:Nwi_2323 ABC-type Fe3+-siderophore transport system permease component; transporter permease 3644489 10065637 Rpdx1_3408 Rhodopseudomonas palustris DX-1 transporter permease YP_004109711.1 3643407 D 652103 CDS YP_004109712.1 316934730 10065638 3644486..3645298 1 NC_014834.1 KEGG: bja:blr7079 hemin importer ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3645298 10065638 Rpdx1_3409 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109712.1 3644486 D 652103 CDS YP_004109713.1 316934731 10065639 3645500..3645982 1 NC_014834.1 KEGG: azc:AZC_2373 flavodoxin FldA; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin 3645982 10065639 Rpdx1_3410 Rhodopseudomonas palustris DX-1 flavodoxin YP_004109713.1 3645500 D 652103 CDS YP_004109714.1 316934732 10065640 3645961..3646377 1 NC_014834.1 PFAM: Domain of unknown function DUF2023; KEGG: xau:Xaut_0833 hypothetical protein; hypothetical protein 3646377 10065640 Rpdx1_3411 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109714.1 3645961 D 652103 CDS YP_004109715.1 316934733 10065641 complement(3646622..3647110) 1 NC_014834.1 TIGRFAM: cyanate lyase; KEGG: bbt:BBta_5412 cyanate hydratase; PFAM: Cyanate lyase domain protein; cyanate lyase 3647110 10065641 Rpdx1_3412 Rhodopseudomonas palustris DX-1 cyanate lyase YP_004109715.1 3646622 R 652103 CDS YP_004109716.1 316934734 10065642 complement(3647155..3648045) 1 NC_014834.1 KEGG: bja:bll5732 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3648045 10065642 Rpdx1_3413 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109716.1 3647155 R 652103 CDS YP_004109717.1 316934735 10065643 complement(3648051..3648890) 1 NC_014834.1 KEGG: bbt:BBta_5414 putative nitrate ABC transporter (permease protein) (NtrB-like protein); TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; nitrate ABC transporter inner membrane subunit 3648890 10065643 Rpdx1_3414 Rhodopseudomonas palustris DX-1 nitrate ABC transporter inner membrane subunit YP_004109717.1 3648051 R 652103 CDS YP_004109718.1 316934736 10065644 complement(3649053..3650438) 1 NC_014834.1 KEGG: bja:bll5734 ABC transporter nitrate-binding protein; ABC transporter nitrate-binding protein 3650438 10065644 Rpdx1_3415 Rhodopseudomonas palustris DX-1 ABC transporter nitrate-binding protein YP_004109718.1 3649053 R 652103 CDS YP_004109719.1 316934737 10065645 3650600..3652525 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; KEGG: bja:blr5735 transcriptional regulatory protein; SMART: AAA ATPase; PAC repeat-containing protein; PAS domain containing protein; Fis family sigma-54 specific transcriptional regulator with PAS/PAC sensor 3652525 10065645 Rpdx1_3416 Rhodopseudomonas palustris DX-1 Fis family sigma-54 specific transcriptional regulator with PAS/PAC sensor YP_004109719.1 3650600 D 652103 CDS YP_004109720.1 316934738 10065646 complement(3652565..3653332) 1 NC_014834.1 TIGRFAM: precorrin-6A synthase (deacetylating); KEGG: rhi:NGR_c29820 deacetylating precorrin-6A synthase CobF; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6A synthase 3653332 10065646 Rpdx1_3417 Rhodopseudomonas palustris DX-1 precorrin-6A synthase YP_004109720.1 3652565 R 652103 CDS YP_004109721.1 316934739 10065647 complement(3653362..3654936) 1 NC_014834.1 KEGG: rce:RC1_0321 cobyric acid synthase; TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyric acid synthase CobQ 3654936 10065647 Rpdx1_3418 Rhodopseudomonas palustris DX-1 cobyric acid synthase CobQ YP_004109721.1 3653362 R 652103 CDS YP_004109722.1 316934740 10065648 complement(3655023..3655793) 1 NC_014834.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: cobalamin 5'-phosphate synthase; cobalamin-5-phosphate synthase CobS 3655793 10065648 Rpdx1_3419 Rhodopseudomonas palustris DX-1 cobalamin-5-phosphate synthase CobS YP_004109722.1 3655023 R 652103 CDS YP_004109723.1 316934741 10065649 complement(3655790..3656854) 1 NC_014834.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3656854 10065649 Rpdx1_3420 Rhodopseudomonas palustris DX-1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_004109723.1 3655790 R 652103 CDS YP_004109724.1 316934742 10065650 3657414..3658718 1 NC_014834.1 manually curated; TIGRFAM: precorrin 3B synthase CobZ; KEGG: alv:Alvin_1082 precorrin 3B synthase CobZ; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; precorrin 3B synthase CobZ 3658718 10065650 Rpdx1_3421 Rhodopseudomonas palustris DX-1 precorrin 3B synthase CobZ YP_004109724.1 3657414 D 652103 CDS YP_004109725.1 316934743 10065651 3658705..3659841 1 NC_014834.1 TIGRFAM: CitB domain protein; KEGG: azl:AZL_b02760 citrate utilization protein B; CitB domain-containing protein 3659841 10065651 Rpdx1_3422 Rhodopseudomonas palustris DX-1 CitB domain-containing protein YP_004109725.1 3658705 D 652103 CDS YP_004109726.1 316934744 10065652 3660242..3660805 1 NC_014834.1 KEGG: bja:blr3263 cobaltochelatase subunit CobN; hypothetical protein 3660805 10065652 Rpdx1_3423 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109726.1 3660242 D 652103 CDS YP_004109727.1 316934745 10065653 3660802..3661431 1 NC_014834.1 KEGG: rde:RD1_3825 precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH; precorrin-8X methylmutase 3661431 10065653 Rpdx1_3424 Rhodopseudomonas palustris DX-1 precorrin-8X methylmutase YP_004109727.1 3660802 D 652103 CDS YP_004109728.1 316934746 10065654 3661428..3662156 1 NC_014834.1 KEGG: sil:SPO2866 precorrin-2 C20-methyltransferase; TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-2 C(20)-methyltransferase 3662156 10065654 Rpdx1_3425 Rhodopseudomonas palustris DX-1 precorrin-2 C(20)-methyltransferase YP_004109728.1 3661428 D 652103 CDS YP_004109729.1 316934747 10065655 3662153..3662914 1 NC_014834.1 TIGRFAM: precorrin-3B C17-methyltransferase; KEGG: sjp:SJA_C2-03130 precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-3B C(17)-methyltransferase 3662914 10065655 Rpdx1_3426 Rhodopseudomonas palustris DX-1 precorrin-3B C(17)-methyltransferase YP_004109729.1 3662153 D 652103 CDS YP_004109730.1 316934748 10065656 complement(3662881..3663630) 1 NC_014834.1 TIGRFAM: precorrin-6x reductase; KEGG: rde:RD1_3822 precorrin-6A reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; precorrin-6x reductase 3663630 10065656 Rpdx1_3427 Rhodopseudomonas palustris DX-1 precorrin-6x reductase YP_004109730.1 3662881 R 652103 CDS YP_004109731.1 316934749 10065657 3663662..3664885 1 NC_014834.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: xau:Xaut_3280 precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE 3664885 10065657 Rpdx1_3428 Rhodopseudomonas palustris DX-1 precorrin-6y C5,15-methyltransferase subunit CbiE YP_004109731.1 3663662 D 652103 CDS YP_004109732.1 316934750 10065658 3664882..3665274 1 NC_014834.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: mdi:METDI1514 putative cobalamin biosynthesis protein; cobalamin (vitamin B12) biosynthesis protein CbiG 3665274 10065658 Rpdx1_3429 Rhodopseudomonas palustris DX-1 cobalamin (vitamin B12) biosynthesis protein CbiG YP_004109732.1 3664882 D 652103 CDS YP_004109733.1 316934751 10065659 3665271..3666050 1 NC_014834.1 TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: rec:RHECIAT_PA0000372 precorrin-4 c(11)-methyltransferase protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 3666050 10065659 Rpdx1_3430 Rhodopseudomonas palustris DX-1 precorrin-4 C(11)-methyltransferase YP_004109733.1 3665271 D 652103 CDS YP_004109734.1 316934752 10065660 3666037..3667398 1 NC_014834.1 KEGG: pde:Pden_2541 cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobyrinic acid a,c-diamide synthase 3667398 10065660 Rpdx1_3431 Rhodopseudomonas palustris DX-1 cobyrinic acid a,c-diamide synthase YP_004109734.1 3666037 D 652103 CDS YP_004109735.1 316934753 10065661 3667398..3668147 1 NC_014834.1 KEGG: sil:SPO2873 uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C-methyltransferase 3668147 10065661 Rpdx1_3432 Rhodopseudomonas palustris DX-1 uroporphyrin-III C-methyltransferase YP_004109735.1 3667398 D 652103 CDS YP_004109736.1 316934754 10065662 complement(3668186..3669142) 1 NC_014834.1 KEGG: nha:Nham_3728 periplasmic binding protein; manually curated; PFAM: periplasmic binding protein; periplasmic-binding protein 3669142 10065662 Rpdx1_3433 Rhodopseudomonas palustris DX-1 periplasmic-binding protein YP_004109736.1 3668186 R 652103 CDS YP_004109737.1 316934755 10065663 complement(3669502..3670011) 1 NC_014834.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: mag:amb3574 hypothetical protein; hemerythrin HHE cation-binding domain-containing protein 3670011 10065663 Rpdx1_3434 Rhodopseudomonas palustris DX-1 hemerythrin HHE cation-binding domain-containing protein YP_004109737.1 3669502 R 652103 CDS YP_004109738.1 316934756 10065664 complement(3670028..3671308) 1 NC_014834.1 KEGG: mag:amb3575 hypothetical protein; hypothetical protein 3671308 10065664 Rpdx1_3435 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109738.1 3670028 R 652103 CDS YP_004109739.1 316934757 10065665 complement(3671305..3671595) 1 NC_014834.1 KEGG: mag:amb3576 hypothetical protein; hypothetical protein 3671595 10065665 Rpdx1_3436 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109739.1 3671305 R 652103 CDS YP_004109740.1 316934758 10065666 complement(3671682..3672152) 1 NC_014834.1 KEGG: pla:Plav_1007 hypothetical protein; hypothetical protein 3672152 10065666 Rpdx1_3437 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109740.1 3671682 R 652103 CDS YP_004109741.1 316934759 10065667 complement(3672191..3673189) 1 NC_014834.1 PFAM: ApbE family lipoprotein; KEGG: oca:OCAR_5025 NosX; ApbE family lipoprotein 3673189 10065667 Rpdx1_3438 Rhodopseudomonas palustris DX-1 ApbE family lipoprotein YP_004109741.1 3672191 R 652103 CDS YP_004109742.1 316934760 10065668 complement(3673201..3673752) 1 NC_014834.1 KEGG: bja:blr0319 NosL protein; NosL protein 3673752 10065668 Rpdx1_3439 Rhodopseudomonas palustris DX-1 NosL protein YP_004109742.1 3673201 R 652103 CDS YP_004109743.1 316934761 10065669 complement(3673749..3674576) 1 NC_014834.1 KEGG: bja:blr0318 nitrous oxide metabolic protein; nitrous oxide metabolic protein 3674576 10065669 Rpdx1_3440 Rhodopseudomonas palustris DX-1 nitrous oxide metabolic protein YP_004109743.1 3673749 R 652103 CDS YP_004109744.1 316934762 10065670 complement(3674573..3675478) 1 NC_014834.1 KEGG: bja:blr0317 copper ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3675478 10065670 Rpdx1_3441 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109744.1 3674573 R 652103 CDS YP_004109745.1 316934763 10065671 complement(3675475..3676839) 1 NC_014834.1 KEGG: bja:blr0316 periplasmic copper-binding precursor; PFAM: periplasmic copper-binding; SMART: Carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat; copper-binding protein 3676839 10065671 Rpdx1_3442 Rhodopseudomonas palustris DX-1 copper-binding protein YP_004109745.1 3675475 R 652103 CDS YP_004109746.1 316934764 10065672 complement(3676842..3678779) 1 NC_014834.1 KEGG: bja:blr0315 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II; nitrous-oxide reductase 3678779 10065672 Rpdx1_3443 Rhodopseudomonas palustris DX-1 nitrous-oxide reductase YP_004109746.1 3676842 R 652103 CDS YP_004109747.1 316934765 10065673 complement(3678797..3681091) 1 NC_014834.1 PFAM: FMN-binding domain protein; KEGG: bja:blr0314 nitrous oxide reductase expression regulator; nitrous oxide expression regulator NosR 3681091 10065673 Rpdx1_3444 Rhodopseudomonas palustris DX-1 nitrous oxide expression regulator NosR YP_004109747.1 3678797 R 652103 CDS YP_004109748.1 316934766 10065674 3681231..3682136 1 NC_014834.1 KEGG: oca:OCAR_5032 hypothetical protein; hypothetical protein 3682136 10065674 Rpdx1_3445 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109748.1 3681231 D 652103 CDS YP_004109749.1 316934767 10065675 3682198..3682482 1 NC_014834.1 KEGG: rme:Rmet_4922 hypothetical protein; hypothetical protein 3682482 10065675 Rpdx1_3446 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109749.1 3682198 D 652103 CDS YP_004109750.1 316934768 10065676 complement(3682564..3682869) 1 NC_014834.1 KEGG: bbt:BBta_3741 hypothetical protein; hypothetical protein 3682869 10065676 Rpdx1_3447 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109750.1 3682564 R 652103 CDS YP_004109751.1 316934769 10065677 complement(3683019..3683183) 1 NC_014834.1 KEGG: dac:Daci_2667 binding-protein-dependent transport systems inner membrane component; hypothetical protein 3683183 10065677 Rpdx1_3448 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109751.1 3683019 R 652103 CDS YP_004109752.1 316934770 10065678 complement(3683402..3683854) 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: mea:Mex_2p0985 hypothetical protein; NUDIX hydrolase 3683854 10065678 Rpdx1_3449 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004109752.1 3683402 R 652103 CDS YP_004109753.1 316934771 10065679 complement(3683940..3687119) 1 NC_014834.1 KEGG: oca:OCAR_7726 cation efflux system protein CzcA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump 3687119 10065679 Rpdx1_3450 Rhodopseudomonas palustris DX-1 CzcA family heavy metal efflux pump YP_004109753.1 3683940 R 652103 CDS YP_004109754.1 316934772 10065680 complement(3687150..3688145) 1 NC_014834.1 KEGG: oca:OCAR_7727 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3688145 10065680 Rpdx1_3451 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004109754.1 3687150 R 652103 CDS YP_004109755.1 316934773 10065681 complement(3688142..3689413) 1 NC_014834.1 PFAM: outer membrane efflux protein; KEGG: oca:OCAR_7728 outer membrane efflux protein; outer membrane efflux protein 3689413 10065681 Rpdx1_3452 Rhodopseudomonas palustris DX-1 outer membrane efflux protein YP_004109755.1 3688142 R 652103 CDS YP_004109756.1 316934774 10065682 complement(3689468..3689827) 1 NC_014834.1 KEGG: nwi:Nwi_1454 hypothetical protein; hypothetical protein 3689827 10065682 Rpdx1_3453 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109756.1 3689468 R 652103 CDS YP_004109757.1 316934775 10065683 complement(3689949..3690491) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bid:Bind_0929 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3690491 10065683 Rpdx1_3454 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004109757.1 3689949 R 652103 CDS YP_004109758.1 316934776 10065684 complement(3690516..3692990) 1 NC_014834.1 KEGG: bid:Bind_0928 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; Ornithine decarboxylase 3692990 10065684 Rpdx1_3455 Rhodopseudomonas palustris DX-1 Ornithine decarboxylase YP_004109758.1 3690516 R 652103 CDS YP_004109759.1 316934777 10065685 complement(3693232..3694446) 1 NC_014834.1 KEGG: nha:Nham_4501 hypothetical protein; hypothetical protein 3694446 10065685 Rpdx1_3456 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109759.1 3693232 R 652103 CDS YP_004109760.1 316934778 10065686 complement(3694439..3696508) 1 NC_014834.1 PFAM: Pseudomurein-binding repeat; KEGG: pap:PSPA7_5332 Sea12; Pseudomurein-binding repeat 3696508 10065686 Rpdx1_3457 Rhodopseudomonas palustris DX-1 Pseudomurein-binding repeat YP_004109760.1 3694439 R 652103 CDS YP_004109761.1 316934779 10065687 complement(3696505..3699288) 1 NC_014834.1 KEGG: pap:PSPA7_5334 type II restriction enzyme, methylase subunit; type II restriction enzyme, methylase subunit 3699288 10065687 Rpdx1_3458 Rhodopseudomonas palustris DX-1 type II restriction enzyme, methylase subunit YP_004109761.1 3696505 R 652103 CDS YP_004109762.1 316934780 10065689 complement(3700274..3700876) 1 NC_014834.1 KEGG: bbt:BBta_6040 hypothetical protein; hypothetical protein 3700876 10065689 Rpdx1_3459 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109762.1 3700274 R 652103 CDS YP_004109763.1 316934781 10065690 complement(3701018..3702310) 1 NC_014834.1 KEGG: pag:PLES_55611 putative C4-dicarboxylate transporter; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 3702310 10065690 Rpdx1_3460 Rhodopseudomonas palustris DX-1 TRAP dicarboxylate transporter subunit DctM YP_004109763.1 3701018 R 652103 CDS YP_004109764.1 316934782 10065691 complement(3702307..3702864) 1 NC_014834.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: hch:HCH_06606 TRAP-type C4-dicarboxylate transport system, small permease component; tripartite AtP-independent periplasmic transporter subunit DctQ 3702864 10065691 Rpdx1_3461 Rhodopseudomonas palustris DX-1 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004109764.1 3702307 R 652103 CDS YP_004109765.1 316934783 10065692 complement(3702928..3703926) 1 NC_014834.1 KEGG: psa:PST_0078 C4 dicarboxylate binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; TRAP dicarboxylate transporter subunit DctP 3703926 10065692 Rpdx1_3462 Rhodopseudomonas palustris DX-1 TRAP dicarboxylate transporter subunit DctP YP_004109765.1 3702928 R 652103 CDS YP_004109766.1 316934784 10065693 complement(3704152..3705726) 1 NC_014834.1 KEGG: bra:BRADO5528 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; 2-isopropylmalate synthase 3705726 10065693 Rpdx1_3463 Rhodopseudomonas palustris DX-1 2-isopropylmalate synthase YP_004109766.1 3704152 R 652103 CDS YP_004109767.1 316934785 10065694 3706225..3707235 1 NC_014834.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: mlo:mll5831 biotin synthetase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; biotin synthase 3707235 10065694 Rpdx1_3464 Rhodopseudomonas palustris DX-1 biotin synthase YP_004109767.1 3706225 D 652103 CDS YP_004109768.1 316934786 10065695 complement(3707417..3707911) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nhl:Nhal_3981 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3707911 10065695 Rpdx1_3465 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004109768.1 3707417 R 652103 CDS YP_004109769.1 316934787 10065696 complement(3707908..3708198) 1 NC_014834.1 PFAM: Protein of unknown function DUF1778; KEGG: pph:Ppha_1718 protein of unknown function DUF1778; hypothetical protein 3708198 10065696 Rpdx1_3466 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109769.1 3707908 R 652103 CDS YP_004109770.1 316934788 10065697 complement(3708372..3709088) 1 NC_014834.1 KEGG: nha:Nham_2717 hypothetical protein; hypothetical protein 3709088 10065697 Rpdx1_3467 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109770.1 3708372 R 652103 CDS YP_004109771.1 316934789 10065698 complement(3709099..3710124) 1 NC_014834.1 SMART: extracellular solute-binding protein family 3; KEGG: bbt:BBta_6066 ABC transporter substrate-binding protein; family 3 extracellular solute-binding protein 3710124 10065698 Rpdx1_3468 Rhodopseudomonas palustris DX-1 family 3 extracellular solute-binding protein YP_004109771.1 3709099 R 652103 CDS YP_004109772.1 316934790 10065699 complement(3710183..3710977) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_6067 ABC transporter permease; binding-protein-dependent transporter inner membrane component 3710977 10065699 Rpdx1_3469 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004109772.1 3710183 R 652103 CDS YP_004109773.1 316934791 10065701 complement(3711198..3712004) 1 NC_014834.1 KEGG: bja:bll6488 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3712004 10065701 Rpdx1_3471 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109773.1 3711198 R 652103 CDS YP_004109774.1 316934792 10065702 3712127..3712900 1 NC_014834.1 KEGG: nha:Nham_2718 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3712900 10065702 Rpdx1_3472 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109774.1 3712127 D 652103 CDS YP_004109775.1 316934793 10065703 3712897..3714444 1 NC_014834.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO5551 putative glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein); glycine betaine ABC transporter substrate-binding protein 3714444 10065703 Rpdx1_3473 Rhodopseudomonas palustris DX-1 glycine betaine ABC transporter substrate-binding protein YP_004109775.1 3712897 D 652103 CDS YP_004109776.1 316934794 10065704 complement(3714466..3715317) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO5556 oxidoreductase; short-chain dehydrogenase/reductase SDR 3715317 10065704 Rpdx1_3474 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004109776.1 3714466 R 652103 CDS YP_004109777.1 316934795 10065705 complement(3715442..3716674) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO0975 branched chain amino acid ABC transporter periplasmic-binding protein; extracellular ligand-binding receptor 3716674 10065705 Rpdx1_3475 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004109777.1 3715442 R 652103 CDS YP_004109778.1 316934796 10065706 complement(3716773..3717507) 1 NC_014834.1 KEGG: bpy:Bphyt_6461 GntR domain protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3717507 10065706 Rpdx1_3476 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004109778.1 3716773 R 652103 CDS YP_004109779.1 316934797 10065707 complement(3717888..3718907) 1 NC_014834.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: bja:bll6497 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase 3718907 10065707 Rpdx1_3477 Rhodopseudomonas palustris DX-1 ketol-acid reductoisomerase YP_004109779.1 3717888 R 652103 CDS YP_004109780.1 316934798 10065708 complement(3719055..3719657) 1 NC_014834.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bja:bll6498 hypothetical protein; lysine exporter protein LysE/YggA 3719657 10065708 Rpdx1_3478 Rhodopseudomonas palustris DX-1 lysine exporter protein LysE/YggA YP_004109780.1 3719055 R 652103 CDS YP_004109781.1 316934799 10065709 complement(3719667..3720542) 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:bll6499 putative amino acid metabolite efflux pump; hypothetical protein 3720542 10065709 Rpdx1_3479 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109781.1 3719667 R 652103 CDS YP_004109782.1 316934800 10065710 3720754..3721152 1 NC_014834.1 PFAM: Host attachment protein; KEGG: xcv:XCV0079 hypothetical protein; host attachment protein 3721152 10065710 Rpdx1_3480 Rhodopseudomonas palustris DX-1 host attachment protein YP_004109782.1 3720754 D 652103 CDS YP_004109783.1 316934801 10065711 complement(3721243..3721785) 1 NC_014834.1 KEGG: bra:BRADO5562 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; acetolactate synthase small subunit 3721785 10065711 Rpdx1_3481 Rhodopseudomonas palustris DX-1 acetolactate synthase small subunit YP_004109783.1 3721243 R 652103 CDS YP_004109784.1 316934802 10065712 complement(3722010..3723788) 1 NC_014834.1 KEGG: bra:BRADO5564 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; acetolactate synthase large subunit, biosynthetic type 3723788 10065712 Rpdx1_3482 Rhodopseudomonas palustris DX-1 acetolactate synthase large subunit, biosynthetic type YP_004109784.1 3722010 R 652103 CDS YP_004109785.1 316934803 10065713 complement(3724158..3725108) 1 NC_014834.1 PFAM: tRNA isopentenyltransferase; manually curated; KEGG: nha:Nham_2723 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 3725108 10065713 Rpdx1_3483 Rhodopseudomonas palustris DX-1 tRNA delta(2)-isopentenylpyrophosphate transferase YP_004109785.1 3724158 R 652103 CDS YP_004109786.1 316934804 10065714 3725107..3726000 1 NC_014834.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: bja:blr6505 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 3726000 10065714 Rpdx1_3484 Rhodopseudomonas palustris DX-1 phosphoserine phosphatase SerB YP_004109786.1 3725107 D 652103 CDS YP_004109787.1 316934805 10065715 complement(3726028..3726657) 1 NC_014834.1 KEGG: mno:Mnod_4564 hypothetical protein; hypothetical protein 3726657 10065715 Rpdx1_3485 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109787.1 3726028 R 652103 CDS YP_004109788.1 316934806 10065716 3726940..3728691 1 NC_014834.1 PFAM: HerA-ATP synthase, barrel domain; KEGG: bja:bll3818 hypothetical protein; HerA-ATP synthase, barrel domain 3728691 10065716 Rpdx1_3486 Rhodopseudomonas palustris DX-1 HerA-ATP synthase, barrel domain YP_004109788.1 3726940 D 652103 CDS YP_004109789.1 316934807 10065717 3728833..3729417 1 NC_014834.1 KEGG: bbt:BBta_3525 hypothetical protein; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; hypothetical protein 3729417 10065717 Rpdx1_3487 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109789.1 3728833 D 652103 CDS YP_004109790.1 316934808 10065718 3729454..3729933 1 NC_014834.1 PFAM: MgtC/SapB transporter; KEGG: bja:bll3816 putative sulfur-regulated protein; MgtC/SapB transporter 3729933 10065718 Rpdx1_3488 Rhodopseudomonas palustris DX-1 MgtC/SapB transporter YP_004109790.1 3729454 D 652103 CDS YP_004109791.1 316934809 10065719 3730111..3730464 1 NC_014834.1 KEGG: bra:BRADO4674 hypothetical protein; hypothetical protein 3730464 10065719 Rpdx1_3489 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109791.1 3730111 D 652103 CDS YP_004109792.1 316934810 10065720 3730636..3730917 1 NC_014834.1 PFAM: phosphopantetheine-binding; KEGG: nha:Nham_1506 acyl carrier protein; phosphopantetheine-binding protein 3730917 10065720 Rpdx1_3490 Rhodopseudomonas palustris DX-1 phosphopantetheine-binding protein YP_004109792.1 3730636 D 652103 CDS YP_004109793.1 316934811 10065721 3730945..3731415 1 NC_014834.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: nwi:Nwi_1245 3-hydroxymyristoyl-acyl carrier protein dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 3731415 10065721 Rpdx1_3491 Rhodopseudomonas palustris DX-1 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_004109793.1 3730945 D 652103 CDS YP_004109794.1 316934812 10065722 3731408..3732616 1 NC_014834.1 PFAM: Beta-ketoacyl synthase; KEGG: nha:Nham_1504 3-oxoacyl-(acyl carrier protein) synthase II; beta-ketoacyl synthase 3732616 10065722 Rpdx1_3492 Rhodopseudomonas palustris DX-1 beta-ketoacyl synthase YP_004109794.1 3731408 D 652103 CDS YP_004109795.1 316934813 10065723 3732627..3733907 1 NC_014834.1 PFAM: Beta-ketoacyl synthase; KEGG: nha:Nham_1503 3-oxoacyl-(acyl carrier protein) synthase II; beta-ketoacyl synthase 3733907 10065723 Rpdx1_3493 Rhodopseudomonas palustris DX-1 beta-ketoacyl synthase YP_004109795.1 3732627 D 652103 CDS YP_004109796.1 316934814 10065724 3734004..3735026 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: oca:OCAR_6502 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 3735026 10065724 Rpdx1_3494 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004109796.1 3734004 D 652103 CDS YP_004109797.1 316934815 10065725 3735026..3735958 1 NC_014834.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: nha:Nham_1502 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase 3735958 10065725 Rpdx1_3495 Rhodopseudomonas palustris DX-1 lipid A biosynthesis acyltransferase YP_004109797.1 3735026 D 652103 CDS YP_004109798.1 316934816 10065726 3736304..3738256 1 NC_014834.1 KEGG: psl:Psta_1421 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 3738256 10065726 Rpdx1_3496 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004109798.1 3736304 D 652103 CDS YP_004109799.1 316934817 10065727 complement(3738270..3739385) 1 NC_014834.1 PFAM: extracellular solute-binding protein family 1; KEGG: bbt:BBta_3516 putrescine ABC transporter, periplasmic binding protein; family 1 extracellular solute-binding protein 3739385 10065727 Rpdx1_3497 Rhodopseudomonas palustris DX-1 family 1 extracellular solute-binding protein YP_004109799.1 3738270 R 652103 CDS YP_004109800.1 316934818 10065728 complement(3739393..3740550) 1 NC_014834.1 PFAM: aminotransferase class I and II; KEGG: bbt:BBta_3515 hypothetical protein; class I/II aminotransferase 3740550 10065728 Rpdx1_3498 Rhodopseudomonas palustris DX-1 class I/II aminotransferase YP_004109800.1 3739393 R 652103 CDS YP_004109801.1 316934819 10065729 complement(3740573..3741028) 1 NC_014834.1 SMART: Rhodanese domain protein; KEGG: bja:blr3804 hypothetical protein; rhodanese domain-containing protein 3741028 10065729 Rpdx1_3499 Rhodopseudomonas palustris DX-1 rhodanese domain-containing protein YP_004109801.1 3740573 R 652103 CDS YP_004109802.1 316934820 10065730 complement(3741093..3741914) 1 NC_014834.1 PFAM: OmpA/MotB domain protein; KEGG: nha:Nham_1496 OmpA/MotB; OmpA/MotB domain-containing protein 3741914 10065730 Rpdx1_3500 Rhodopseudomonas palustris DX-1 OmpA/MotB domain-containing protein YP_004109802.1 3741093 R 652103 CDS YP_004109803.1 316934821 10065731 complement(3741943..3742716) 1 NC_014834.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: bra:BRADO4687 putative chemotaxis protein MotA (flagellar motor component); MotA/TolQ/ExbB proton channel 3742716 10065731 Rpdx1_3501 Rhodopseudomonas palustris DX-1 MotA/TolQ/ExbB proton channel YP_004109803.1 3741943 R 652103 CDS YP_004109804.1 316934822 10065732 complement(3743017..3743937) 1 NC_014834.1 KEGG: bja:blr3797 phosphatidylserine synthase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 3743937 10065732 Rpdx1_3502 Rhodopseudomonas palustris DX-1 CDP-diacylglycerol/serine O-phosphatidyltransferase YP_004109804.1 3743017 R 652103 CDS YP_004109805.1 316934823 10065733 complement(3743971..3744669) 1 NC_014834.1 TIGRFAM: phosphatidylserine decarboxylase related protein; KEGG: oca:OCAR_6512 phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 3744669 10065733 Rpdx1_3503 Rhodopseudomonas palustris DX-1 phosphatidylserine decarboxylase YP_004109805.1 3743971 R 652103 CDS YP_004109806.1 316934824 10065734 complement(3744718..3746715) 1 NC_014834.1 KEGG: bja:blr3795 ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein 3746715 10065734 Rpdx1_3504 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109806.1 3744718 R 652103 CDS YP_004109807.1 316934825 10065735 3746913..3747512 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_1232 hypothetical protein; hypothetical protein 3747512 10065735 Rpdx1_3505 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109807.1 3746913 D 652103 CDS YP_004109808.1 316934826 10065736 3747696..3749765 1 NC_014834.1 KEGG: xau:Xaut_1071 gluconate 2-dehydrogenase (acceptor); PFAM: cytochrome c class I; gluconate 2-dehydrogenase 3749765 10065736 Rpdx1_3506 Rhodopseudomonas palustris DX-1 gluconate 2-dehydrogenase YP_004109808.1 3747696 D 652103 CDS YP_004109809.1 316934827 10065737 complement(3749790..3751199) 1 NC_014834.1 PFAM: FAD linked oxidase domain protein; KEGG: pla:Plav_2705 FAD linked oxidase domain-containing protein; FAD linked oxidase domain-containing protein 3751199 10065737 Rpdx1_3507 Rhodopseudomonas palustris DX-1 FAD linked oxidase domain-containing protein YP_004109809.1 3749790 R 652103 CDS YP_004109810.1 316934828 10065738 complement(3751211..3752770) 1 NC_014834.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pla:Plav_0755 hypothetical protein; thiamine pyrophosphate domain-containing TPP-binding protein 3752770 10065738 Rpdx1_3508 Rhodopseudomonas palustris DX-1 thiamine pyrophosphate domain-containing TPP-binding protein YP_004109810.1 3751211 R 652103 CDS YP_004109811.1 316934829 10065739 complement(3753024..3754622) 1 NC_014834.1 KEGG: nwi:Nwi_1231 putative alpha-isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; 2-isopropylmalate synthase 3754622 10065739 Rpdx1_3509 Rhodopseudomonas palustris DX-1 2-isopropylmalate synthase YP_004109811.1 3753024 R 652103 CDS YP_004109812.1 316934830 10065740 complement(3754619..3755128) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_3500 acetyltransferase; N-acetyltransferase GCN5 3755128 10065740 Rpdx1_3510 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004109812.1 3754619 R 652103 CDS YP_004109813.1 316934831 10065741 complement(3755128..3755259) 1 NC_014834.1 KEGG: bbt:BBta_3499 hypothetical protein; hypothetical protein 3755259 10065741 Rpdx1_3511 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109813.1 3755128 R 652103 CDS YP_004109814.1 316934832 10065742 complement(3755423..3756814) 1 NC_014834.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: bbt:BBta_3498 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; cysteinyl-tRNA synthetase 3756814 10065742 Rpdx1_3512 Rhodopseudomonas palustris DX-1 cysteinyl-tRNA synthetase YP_004109814.1 3755423 R 652103 CDS YP_004109815.1 316934833 10065743 3757245..3757553 1 NC_014834.1 KEGG: bja:bll3789 hypothetical protein; hypothetical protein 3757553 10065743 Rpdx1_3513 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109815.1 3757245 D 652103 CDS YP_004109816.1 316934834 10065744 3757742..3758893 1 NC_014834.1 KEGG: nha:Nham_1486 hypothetical protein; hypothetical protein 3758893 10065744 Rpdx1_3514 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109816.1 3757742 D 652103 CDS YP_004109817.1 316934835 10065745 3758991..3760325 1 NC_014834.1 PFAM: amine oxidase; KEGG: nca:Noca_3672 protoporphyrinogen oxidase; amine oxidase 3760325 10065745 Rpdx1_3515 Rhodopseudomonas palustris DX-1 amine oxidase YP_004109817.1 3758991 D 652103 CDS YP_004109818.1 316934836 10065746 complement(3760350..3761012) 1 NC_014834.1 KEGG: pag:PLES_09021 putative transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 3761012 10065746 Rpdx1_3516 Rhodopseudomonas palustris DX-1 LuxR family transcriptional regulator YP_004109818.1 3760350 R 652103 CDS YP_004109819.1 316934837 10065747 3761089..3761550 1 NC_014834.1 PFAM: SpoVT/AbrB domain protein; KEGG: rec:RHECIAT_CH0002963 hypothetical protein; SpoVT/AbrB domain-containing protein 3761550 10065747 Rpdx1_3517 Rhodopseudomonas palustris DX-1 SpoVT/AbrB domain-containing protein YP_004109819.1 3761089 D 652103 CDS YP_004109820.1 316934838 10065748 3761547..3761957 1 NC_014834.1 PFAM: PilT protein domain protein; KEGG: rec:RHECIAT_CH0002962 hypothetical protein; PilT domain-containing protein 3761957 10065748 Rpdx1_3518 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004109820.1 3761547 D 652103 CDS YP_004109821.1 316934839 10065749 3762080..3762676 1 NC_014834.1 KEGG: shw:Sputw3181_4076 hypothetical protein; hypothetical protein 3762676 10065749 Rpdx1_3519 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109821.1 3762080 D 652103 CDS YP_004109822.1 316934840 10065750 complement(3762701..3764458) 1 NC_014834.1 TIGRFAM: NAD+ synthetase; KEGG: nha:Nham_1485 NAD synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD+ synthetase 3764458 10065750 Rpdx1_3520 Rhodopseudomonas palustris DX-1 NAD+ synthetase YP_004109822.1 3762701 R 652103 CDS YP_004109823.1 316934841 10065751 complement(3764505..3764960) 1 NC_014834.1 PFAM: diacylglycerol kinase; KEGG: nha:Nham_1484 diacylglycerol kinase; diacylglycerol kinase 3764960 10065751 Rpdx1_3521 Rhodopseudomonas palustris DX-1 diacylglycerol kinase YP_004109823.1 3764505 R 652103 CDS YP_004109824.1 316934842 10065752 complement(3765187..3766575) 1 NC_014834.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: bja:blr3778 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II; phospho-2-dehydro-3-deoxyheptonate aldolase 3766575 10065752 Rpdx1_3522 Rhodopseudomonas palustris DX-1 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004109824.1 3765187 R 652103 CDS YP_004109825.1 316934843 10065753 complement(3766763..3768148) 1 NC_014834.1 KEGG: nha:Nham_1482 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; glutathione-disulfide reductase 3768148 10065753 Rpdx1_3523 Rhodopseudomonas palustris DX-1 glutathione-disulfide reductase YP_004109825.1 3766763 R 652103 CDS YP_004109826.1 316934844 10065754 complement(3768166..3768675) 1 NC_014834.1 PFAM: Protein of unknown function DUF2059; KEGG: nwi:Nwi_1222 hypothetical protein; hypothetical protein 3768675 10065754 Rpdx1_3524 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109826.1 3768166 R 652103 CDS YP_004109827.1 316934845 10065755 complement(3768702..3769400) 1 NC_014834.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: oca:OCAR_6529 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 3769400 10065755 Rpdx1_3525 Rhodopseudomonas palustris DX-1 ribose 5-phosphate isomerase YP_004109827.1 3768702 R 652103 CDS YP_004109828.1 316934846 10065756 3769548..3770225 1 NC_014834.1 KEGG: bbt:BBta_3482 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase 3770225 10065756 Rpdx1_3526 Rhodopseudomonas palustris DX-1 phosphoglycolate phosphatase YP_004109828.1 3769548 D 652103 CDS YP_004109829.1 316934847 10065757 3770337..3770834 1 NC_014834.1 KEGG: nha:Nham_1478 hypothetical protein; hypothetical protein 3770834 10065757 Rpdx1_3527 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109829.1 3770337 D 652103 CDS YP_004109830.1 316934848 10065758 3770953..3771987 1 NC_014834.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: bja:bll3752 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A 3771987 10065758 Rpdx1_3528 Rhodopseudomonas palustris DX-1 molybdenum cofactor biosynthesis protein A YP_004109830.1 3770953 D 652103 CDS YP_004109831.1 316934849 10065759 3772174..3772770 1 NC_014834.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: oca:OCAR_6533 tripartite ATP-independent periplasmic transporter; tripartite AtP-independent periplasmic transporter subunit DctQ 3772770 10065759 Rpdx1_3529 Rhodopseudomonas palustris DX-1 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004109831.1 3772174 D 652103 CDS YP_004109832.1 316934850 10065760 3772808..3774649 1 NC_014834.1 KEGG: oca:OCAR_6534 trap dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 3774649 10065760 Rpdx1_3530 Rhodopseudomonas palustris DX-1 TRAP dicarboxylate transporter subunit DctM YP_004109832.1 3772808 D 652103 CDS YP_004109833.1 316934851 10065761 complement(3774831..3775922) 1 NC_014834.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: bbt:BBta_3466 putative periplasmic mannitol-binding protein; family 7 extracellular solute-binding protein 3775922 10065761 Rpdx1_3531 Rhodopseudomonas palustris DX-1 family 7 extracellular solute-binding protein YP_004109833.1 3774831 R 652103 CDS YP_004109834.1 316934852 10065762 complement(3776173..3777288) 1 NC_014834.1 PFAM: ATPase-like, ParA/MinD; KEGG: bja:blr3742 multidrug-resistance related protein; ParA/MinD-like ATPase 3777288 10065762 Rpdx1_3532 Rhodopseudomonas palustris DX-1 ParA/MinD-like ATPase YP_004109834.1 3776173 R 652103 CDS YP_004109835.1 316934853 10065763 3777581..3778450 1 NC_014834.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bra:BRADO4737 putative oxidoreductase; putative 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase protein 3778450 10065763 Rpdx1_3533 Rhodopseudomonas palustris DX-1 6-phosphogluconate dehydrogenase protein YP_004109835.1 3777581 D 652103 CDS YP_004109836.1 316934854 10065764 3778619..3780211 1 NC_014834.1 KEGG: nha:Nham_1469 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3780211 10065764 Rpdx1_3534 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004109836.1 3778619 D 652103 CDS YP_004109837.1 316934855 10065765 3780256..3780480 1 NC_014834.1 PFAM: protein of unknown function DUF1289; KEGG: bja:bsl3737 hypothetical protein; hypothetical protein 3780480 10065765 Rpdx1_3535 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109837.1 3780256 D 652103 CDS YP_004109838.1 316934856 10065766 3780503..3781039 1 NC_014834.1 KEGG: nwi:Nwi_1211 hypothetical protein; hypothetical protein 3781039 10065766 Rpdx1_3536 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109838.1 3780503 D 652103 CDS YP_004109839.1 316934857 10065767 complement(3781051..3782046) 1 NC_014834.1 manually curated; TIGRFAM: TIM-barrel protein, yjbN family; KEGG: bra:BRADO4745 tRNA-dihydrouridine synthase A; PFAM: dihydrouridine synthase DuS; yjbN family TIM-barrel protein 3782046 10065767 Rpdx1_3537 Rhodopseudomonas palustris DX-1 yjbN family TIM-barrel protein YP_004109839.1 3781051 R 652103 CDS YP_004109840.1 316934858 10065768 complement(3782158..3785313) 1 NC_014834.1 PFAM: acriflavin resistance protein; KEGG: nha:Nham_1082 acriflavin resistance protein; acriflavin resistance protein 3785313 10065768 Rpdx1_3538 Rhodopseudomonas palustris DX-1 acriflavin resistance protein YP_004109840.1 3782158 R 652103 CDS YP_004109841.1 316934859 10065769 complement(3785313..3786428) 1 NC_014834.1 KEGG: bra:BRADO1901 putative component of multidrug efflux system; putative signal peptide; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3786428 10065769 Rpdx1_3539 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004109841.1 3785313 R 652103 CDS YP_004109842.1 316934860 10065770 3786592..3787224 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: psp:PSPPH_3268 TetR family transcriptional regulator; regulatory protein TetR 3787224 10065770 Rpdx1_3540 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004109842.1 3786592 D 652103 CDS YP_004109843.1 316934861 10065771 3787496..3789484 1 NC_014834.1 KEGG: ret:RHE_CH02959 adenylate cyclase protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase HAMP region domain protein; adenylate/guanylate cyclase with integral membrane sensor 3789484 10065771 Rpdx1_3541 Rhodopseudomonas palustris DX-1 adenylate/guanylate cyclase with integral membrane sensor YP_004109843.1 3787496 D 652103 CDS YP_004109844.1 316934862 10065772 complement(3789509..3790066) 1 NC_014834.1 KEGG: bja:blr4686 hypothetical protein; hypothetical protein 3790066 10065772 Rpdx1_3542 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109844.1 3789509 R 652103 CDS YP_004109845.1 316934863 10065773 complement(3790125..3791318) 1 NC_014834.1 PFAM: Patatin; KEGG: oca:OCAR_4867 patatin; patatin 3791318 10065773 Rpdx1_3543 Rhodopseudomonas palustris DX-1 patatin YP_004109845.1 3790125 R 652103 CDS YP_004109846.1 316934864 10065774 complement(3791350..3791631) 1 NC_014834.1 KEGG: bpm:BURPS1710b_A0059 thiaminase I precursor; hypothetical protein 3791631 10065774 Rpdx1_3544 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109846.1 3791350 R 652103 CDS YP_004109847.1 316934865 10065775 complement(3791633..3794683) 1 NC_014834.1 PFAM: acriflavin resistance protein; KEGG: bbt:BBta_2039 RND family mulitdrug efflux protein; acriflavin resistance protein 3794683 10065775 Rpdx1_3545 Rhodopseudomonas palustris DX-1 acriflavin resistance protein YP_004109847.1 3791633 R 652103 CDS YP_004109848.1 316934866 10065776 complement(3794680..3795753) 1 NC_014834.1 KEGG: bbt:BBta_2040 RND family mulitdrug efflux protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3795753 10065776 Rpdx1_3546 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004109848.1 3794680 R 652103 CDS YP_004109849.1 316934867 10065777 complement(3795750..3796838) 1 NC_014834.1 KEGG: bra:BRADO1729 RND family mulitdrug efflux protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3796838 10065777 Rpdx1_3547 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004109849.1 3795750 R 652103 CDS YP_004109850.1 316934868 10065778 3796917..3797540 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: xau:Xaut_4925 TetR family transcriptional regulator; TetR family transcriptional regulator 3797540 10065778 Rpdx1_3548 Rhodopseudomonas palustris DX-1 TetR family transcriptional regulator YP_004109850.1 3796917 D 652103 CDS YP_004109851.1 316934869 10065779 3797653..3798669 1 NC_014834.1 PFAM: Luciferase-like, subgroup; KEGG: azc:AZC_4553 putative alkanal monooxygenase; luciferase-like protein 3798669 10065779 Rpdx1_3549 Rhodopseudomonas palustris DX-1 luciferase-like protein YP_004109851.1 3797653 D 652103 CDS YP_004109852.1 316934870 10065780 3798795..3800318 1 NC_014834.1 SMART: AAA ATPase; KEGG: bra:BRADO5753 putative ATPase; AAA ATPase 3800318 10065780 Rpdx1_3550 Rhodopseudomonas palustris DX-1 AAA ATPase YP_004109852.1 3798795 D 652103 CDS YP_004109853.1 316934871 10065781 3800416..3801525 1 NC_014834.1 KEGG: bbt:BBta_5970 alcohol dehydrogenase class III; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3801525 10065781 Rpdx1_3551 Rhodopseudomonas palustris DX-1 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_004109853.1 3800416 D 652103 CDS YP_004109854.1 316934872 10065782 complement(3801647..3802825) 1 NC_014834.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: bbt:BBta_6304 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB; coenzyme PQQ biosynthesis protein E 3802825 10065782 Rpdx1_3552 Rhodopseudomonas palustris DX-1 coenzyme PQQ biosynthesis protein E YP_004109854.1 3801647 R 652103 CDS YP_004109855.1 316934873 10065783 complement(3802822..3803130) 1 NC_014834.1 KEGG: bra:BRADO5796 coenzyme PQQ synthesis protein D (pyrroloquinoline quinone biosynthesis protein D)(PqqD); coenzyme PQQ synthesis protein D 3803130 10065783 Rpdx1_3553 Rhodopseudomonas palustris DX-1 coenzyme PQQ synthesis protein D YP_004109855.1 3802822 R 652103 CDS YP_004109856.1 316934874 10065784 complement(3803135..3803899) 1 NC_014834.1 TIGRFAM: coenzyme PQQ biosynthesis protein C; KEGG: bja:blr6737 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 domain protein; coenzyme PQQ biosynthesis protein C 3803899 10065784 Rpdx1_3554 Rhodopseudomonas palustris DX-1 coenzyme PQQ biosynthesis protein C YP_004109856.1 3803135 R 652103 CDS YP_004109857.1 316934875 10065785 complement(3803896..3804822) 1 NC_014834.1 TIGRFAM: coenzyme PQQ biosynthesis protein B; KEGG: bja:blr6736 pyrroloquinoline quinone biosynthesis protein PqqB; coenzyme PQQ biosynthesis protein B 3804822 10065785 Rpdx1_3555 Rhodopseudomonas palustris DX-1 coenzyme PQQ biosynthesis protein B YP_004109857.1 3803896 R 652103 CDS YP_004109858.1 316934876 10065786 complement(3804944..3805024) 1 NC_014834.1 manually curated; TIGRFAM: coenzyme PQQ biosynthesis protein A; KEGG: bbt:BBta_6300 pyrroloquinoline quinone biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A; coenzyme PQQ biosynthesis protein A 3805024 10065786 Rpdx1_3556 Rhodopseudomonas palustris DX-1 coenzyme PQQ biosynthesis protein A YP_004109858.1 3804944 R 652103 CDS YP_004109859.1 316934877 10065787 3805298..3806029 1 NC_014834.1 KEGG: bja:bll3158 transcriptional regulatory protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3806029 10065787 Rpdx1_3557 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004109859.1 3805298 D 652103 CDS YP_004109860.1 316934878 10065788 3806146..3807423 1 NC_014834.1 KEGG: bja:bll3156 formyl-coenzyme A transferase; TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; formyl-CoA transferase 3807423 10065788 Rpdx1_3558 Rhodopseudomonas palustris DX-1 formyl-CoA transferase YP_004109860.1 3806146 D 652103 CDS YP_004109861.1 316934879 10065789 3807515..3808495 1 NC_014834.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: bja:bll3147 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 3808495 10065789 Rpdx1_3559 Rhodopseudomonas palustris DX-1 2-dehydropantoate 2-reductase YP_004109861.1 3807515 D 652103 CDS YP_004109862.1 316934880 10065790 3808652..3809437 1 NC_014834.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bja:bll3146 hypothetical protein; fumarylacetoacetate (FAA) hydrolase 3809437 10065790 Rpdx1_3560 Rhodopseudomonas palustris DX-1 fumarylacetoacetate (FAA) hydrolase YP_004109862.1 3808652 D 652103 CDS YP_004109863.1 316934881 10065791 3809682..3810677 1 NC_014834.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bja:bll3143 hypothetical protein; 2-nitropropane dioxygenase 3810677 10065791 Rpdx1_3561 Rhodopseudomonas palustris DX-1 2-nitropropane dioxygenase YP_004109863.1 3809682 D 652103 CDS YP_004109864.1 316934882 10065792 3810723..3811691 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bra:BRADO4966 putative NADPH quinone oxidoreductase; alcohol dehydrogenase zinc-binding domain-containing protein 3811691 10065792 Rpdx1_3562 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004109864.1 3810723 D 652103 CDS YP_004109865.1 316934883 10065793 3811818..3813197 1 NC_014834.1 KEGG: nha:Nham_1450 cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 3813197 10065793 Rpdx1_3563 Rhodopseudomonas palustris DX-1 cation diffusion facilitator family transporter YP_004109865.1 3811818 D 652103 CDS YP_004109866.1 316934884 10065794 3813417..3815726 1 NC_014834.1 KEGG: nha:Nham_1449 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 3815726 10065794 Rpdx1_3564 Rhodopseudomonas palustris DX-1 PAS/PAC sensor signal transduction histidine kinase YP_004109866.1 3813417 D 652103 CDS YP_004109867.1 316934885 10065795 complement(3815977..3819453) 1 NC_014834.1 KEGG: azc:AZC_3227 putative outer membrane autotransporter barrel precursor; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; outer membrane autotransporter barrel domain-containing protein 3819453 10065795 Rpdx1_3565 Rhodopseudomonas palustris DX-1 outer membrane autotransporter barrel domain-containing protein YP_004109867.1 3815977 R 652103 CDS YP_004109868.1 316934886 10065796 3819863..3820885 1 NC_014834.1 KEGG: mpo:Mpop_2366 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3820885 10065796 Rpdx1_3566 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004109868.1 3819863 D 652103 CDS YP_004109869.1 316934887 10065797 3820965..3821234 1 NC_014834.1 KEGG: bbt:BBta_2046 hypothetical protein; hypothetical protein 3821234 10065797 Rpdx1_3567 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109869.1 3820965 D 652103 CDS YP_004109870.1 316934888 10065798 complement(3821294..3824266) 1 NC_014834.1 KEGG: nwi:Nwi_1199 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 3824266 10065798 Rpdx1_3568 Rhodopseudomonas palustris DX-1 (glutamate--ammonia-ligase) adenylyltransferase YP_004109870.1 3821294 R 652103 CDS YP_004109871.1 316934889 10065799 complement(3824263..3825708) 1 NC_014834.1 KEGG: bbt:BBta_3085 putative two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3825708 10065799 Rpdx1_3569 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004109871.1 3824263 R 652103 CDS YP_004109872.1 316934890 10065800 complement(3825967..3827253) 1 NC_014834.1 KEGG: rru:Rru_A1802 chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer 3827253 10065800 Rpdx1_3570 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004109872.1 3825967 R 652103 CDS YP_004109873.1 316934891 10065801 complement(3827371..3828096) 1 NC_014834.1 KEGG: bbt:BBta_3078 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 3828096 10065801 Rpdx1_3571 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004109873.1 3827371 R 652103 CDS YP_004109874.1 316934892 10065802 complement(3828332..3829900) 1 NC_014834.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: bra:BRADO2741 putative serine protease do-like precursor; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 3829900 10065802 Rpdx1_3572 Rhodopseudomonas palustris DX-1 protease Do YP_004109874.1 3828332 R 652103 CDS YP_004109875.1 316934893 10065803 3830178..3831176 1 NC_014834.1 PFAM: ferredoxin; KEGG: mgm:Mmc1_1188 ferredoxin; ferredoxin 3831176 10065803 Rpdx1_3573 Rhodopseudomonas palustris DX-1 ferredoxin YP_004109875.1 3830178 D 652103 CDS YP_004109876.1 316934894 10065804 3831230..3831718 1 NC_014834.1 KEGG: msl:Msil_3779 rubrerythrin; rubrerythrin 3831718 10065804 Rpdx1_3574 Rhodopseudomonas palustris DX-1 rubrerythrin YP_004109876.1 3831230 D 652103 CDS YP_004109877.1 316934895 10065805 3831993..3833231 1 NC_014834.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rsh:Rsph17029_3566 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K 3833231 10065805 Rpdx1_3575 Rhodopseudomonas palustris DX-1 cobalamin synthesis protein P47K YP_004109877.1 3831993 D 652103 CDS YP_004109878.1 316934896 10065806 3833353..3834375 1 NC_014834.1 KEGG: apt:APA01_01550 aliphatic amidase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; formamidase 3834375 10065806 Rpdx1_3576 Rhodopseudomonas palustris DX-1 formamidase YP_004109878.1 3833353 D 652103 CDS YP_004109879.1 316934897 10065807 complement(3834501..3835694) 1 NC_014834.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bbt:BBta_3438 putative secretion protein HlyD precursor; RND family efflux transporter MFP subunit 3835694 10065807 Rpdx1_3577 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004109879.1 3834501 R 652103 CDS YP_004109880.1 316934898 10065808 complement(3835696..3838044) 1 NC_014834.1 PFAM: protein of unknown function DUF214; KEGG: bbt:BBta_5376 hypothetical protein; hypothetical protein 3838044 10065808 Rpdx1_3578 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109880.1 3835696 R 652103 CDS YP_004109881.1 316934899 10065809 complement(3838041..3838757) 1 NC_014834.1 KEGG: bbt:BBta_5377 putative ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 3838757 10065809 Rpdx1_3579 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004109881.1 3838041 R 652103 CDS YP_004109882.1 316934900 10065810 complement(3838859..3839356) 1 NC_014834.1 PFAM: cytochrome C biogenesis protein; KEGG: bja:blr3128 cytochrome c-type biogenesis protein; cytochrome C biogenesis protein 3839356 10065810 Rpdx1_3580 Rhodopseudomonas palustris DX-1 cytochrome C biogenesis protein YP_004109882.1 3838859 R 652103 CDS YP_004109883.1 316934901 10065811 complement(3839370..3841352) 1 NC_014834.1 KEGG: nwi:Nwi_1193 cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF 3841352 10065811 Rpdx1_3581 Rhodopseudomonas palustris DX-1 cytochrome c-type biogenesis protein CcmF YP_004109883.1 3839370 R 652103 CDS YP_004109884.1 316934902 10065812 complement(3841349..3841852) 1 NC_014834.1 PFAM: CcmE/CycJ protein; KEGG: bra:BRADO2733 cytochrome c-type biogenesis protein CcmE; CcmE/CycJ protein 3841852 10065812 Rpdx1_3582 Rhodopseudomonas palustris DX-1 CcmE/CycJ protein YP_004109884.1 3841349 R 652103 CDS YP_004109885.1 316934903 10065813 complement(3841969..3843072) 1 NC_014834.1 TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: bbt:BBta_3071 cytochrome c-type biogenesis protein CycH; cytochrome c-type biogenesis protein CcmI 3843072 10065813 Rpdx1_3583 Rhodopseudomonas palustris DX-1 cytochrome c-type biogenesis protein CcmI YP_004109885.1 3841969 R 652103 CDS YP_004109886.1 316934904 10065814 complement(3843236..3844639) 1 NC_014834.1 KEGG: nha:Nham_1436 hypothetical protein; hypothetical protein 3844639 10065814 Rpdx1_3584 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109886.1 3843236 R 652103 CDS YP_004109887.1 316934905 10065815 complement(3844862..3845326) 1 NC_014834.1 KEGG: nha:Nham_1435 LipA a lipoprotein; LipA a lipoprotein 3845326 10065815 Rpdx1_3585 Rhodopseudomonas palustris DX-1 LipA a lipoprotein YP_004109887.1 3844862 R 652103 CDS YP_004109888.1 316934906 10065816 complement(3845421..3846812) 1 NC_014834.1 KEGG: nha:Nham_1434 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 3846812 10065816 Rpdx1_3586 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004109888.1 3845421 R 652103 CDS YP_004109889.1 316934907 10065817 complement(3846828..3847502) 1 NC_014834.1 KEGG: nha:Nham_1433 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 3847502 10065817 Rpdx1_3587 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004109889.1 3846828 R 652103 CDS YP_004109890.1 316934908 10065818 complement(3847621..3848193) 1 NC_014834.1 KEGG: azc:AZC_2138 hypothetical protein; hypothetical protein 3848193 10065818 Rpdx1_3588 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109890.1 3847621 R 652103 CDS YP_004109891.1 316934909 10065819 complement(3848196..3848945) 1 NC_014834.1 KEGG: nha:Nham_1429 putative glycohydrolase; putative glycohydrolase 3848945 10065819 Rpdx1_3589 Rhodopseudomonas palustris DX-1 putative glycohydrolase YP_004109891.1 3848196 R 652103 CDS YP_004109892.1 316934910 10065820 3849285..3851708 1 NC_014834.1 PFAM: Radical SAM domain protein; KEGG: cyc:PCC7424_4250 radical SAM domain protein; radical SAM protein 3851708 10065820 Rpdx1_3590 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004109892.1 3849285 D 652103 CDS YP_004109893.1 316934911 10065821 complement(3851720..3853066) 1 NC_014834.1 KEGG: nwi:Nwi_1182 hypothetical protein; hypothetical protein 3853066 10065821 Rpdx1_3591 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109893.1 3851720 R 652103 CDS YP_004109894.1 316934912 10065822 complement(3853079..3856951) 1 NC_014834.1 KEGG: nha:Nham_1426 gene transfer agent (GTA) orfg15, like protein; gene transfer agent (GTA)-like protein 3856951 10065822 Rpdx1_3592 Rhodopseudomonas palustris DX-1 gene transfer agent (GTA)-like protein YP_004109894.1 3853079 R 652103 CDS YP_004109895.1 316934913 10065823 complement(3857080..3857649) 1 NC_014834.1 KEGG: rle:RL3155 putative cytochrome b561; putative cytochrome b561 3857649 10065823 Rpdx1_3593 Rhodopseudomonas palustris DX-1 putative cytochrome b561 YP_004109895.1 3857080 R 652103 CDS YP_004109896.1 316934914 10065824 complement(3857677..3858129) 1 NC_014834.1 KEGG: rhi:NGR_c30270 hypothetical protein; hypothetical protein 3858129 10065824 Rpdx1_3594 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109896.1 3857677 R 652103 CDS YP_004109897.1 316934915 10065825 complement(3858130..3858603) 1 NC_014834.1 KEGG: mno:Mnod_3659 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 3858603 10065825 Rpdx1_3595 Rhodopseudomonas palustris DX-1 regulatory protein MarR YP_004109897.1 3858130 R 652103 CDS YP_004109898.1 316934916 10065826 3858758..3859225 1 NC_014834.1 KEGG: dsi:Dsim_GD24223 GD24223 gene product from transcript GD24223-RA; hypothetical protein 3859225 10065826 Rpdx1_3596 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109898.1 3858758 D 652103 CDS YP_004109899.1 316934917 10065827 complement(3859264..3859689) 1 NC_014834.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: mrd:Mrad2831_2003 glutathione-dependent formaldehyde-activating GFA; glutathione-dependent formaldehyde-activating protein 3859689 10065827 Rpdx1_3597 Rhodopseudomonas palustris DX-1 glutathione-dependent formaldehyde-activating protein YP_004109899.1 3859264 R 652103 CDS YP_004109900.1 316934918 10065828 complement(3859755..3860207) 1 NC_014834.1 TIGRFAM: phage cell wall peptidase, NlpC/P60 family; KEGG: nwi:Nwi_1180 putative phage cell wall peptidase, NlpC/P60; phage cell wall peptidase, NlpC/P60 family 3860207 10065828 Rpdx1_3598 Rhodopseudomonas palustris DX-1 phage cell wall peptidase, NlpC/P60 family YP_004109900.1 3859755 R 652103 CDS YP_004109901.1 316934919 10065829 complement(3860250..3861161) 1 NC_014834.1 PFAM: Phage conserved hypothetical protein, gene transfer agent-like-like; KEGG: nwi:Nwi_1179 hypothetical protein; gene transfer agent-like protein 3861161 10065829 Rpdx1_3599 Rhodopseudomonas palustris DX-1 gene transfer agent-like protein YP_004109901.1 3860250 R 652103 CDS YP_004109902.1 316934920 10065830 complement(3861293..3862420) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rle:pRL100302 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3862420 10065830 Rpdx1_3600 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004109902.1 3861293 R 652103 CDS YP_004109903.1 316934921 10065831 complement(3862428..3863615) 1 NC_014834.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: xau:Xaut_4665 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 3863615 10065831 Rpdx1_3601 Rhodopseudomonas palustris DX-1 acetyl-CoA acetyltransferase YP_004109903.1 3862428 R 652103 CDS YP_004109904.1 316934922 10065832 complement(3863676..3864443) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_4664 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3864443 10065832 Rpdx1_3602 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004109904.1 3863676 R 652103 CDS YP_004109905.1 316934923 10065833 complement(3864462..3866147) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bcj:BCAS0739 putative acetyl-CoA synthetase; AMP-dependent synthetase and ligase 3866147 10065833 Rpdx1_3603 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004109905.1 3864462 R 652103 CDS YP_004109906.1 316934924 10065834 3866301..3867293 1 NC_014834.1 KEGG: xau:Xaut_4663 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3867293 10065834 Rpdx1_3604 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004109906.1 3866301 D 652103 CDS YP_004109907.1 316934925 10065835 complement(3867523..3868263) 1 NC_014834.1 KEGG: bra:BRADO1260 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 3868263 10065835 Rpdx1_3605 Rhodopseudomonas palustris DX-1 LuxR family transcriptional regulator YP_004109907.1 3867523 R 652103 CDS YP_004109908.1 316934926 10065836 complement(3868404..3868964) 1 NC_014834.1 PFAM: flagellar FlbT family protein; KEGG: bra:BRADO7004 flagellar biosynthesis repressor FlbT; flagellar FlbT family protein 3868964 10065836 Rpdx1_3606 Rhodopseudomonas palustris DX-1 flagellar FlbT family protein YP_004109908.1 3868404 R 652103 CDS YP_004109909.1 316934927 10065837 complement(3869028..3871703) 1 NC_014834.1 PFAM: protein of unknown function DUF1522; KEGG: bja:bll5846 flagellin; hypothetical protein 3871703 10065837 Rpdx1_3607 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109909.1 3869028 R 652103 CDS YP_004109910.1 316934928 10065838 complement(3871902..3872540) 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: nha:Nham_1423 hypothetical protein; hypothetical protein 3872540 10065838 Rpdx1_3608 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109910.1 3871902 R 652103 CDS YP_004109911.1 316934929 10065839 complement(3872629..3873219) 1 NC_014834.1 KEGG: nha:Nham_1422 gene transfer agent (GTA) like protein; gene transfer agent (GTA)-like protein 3873219 10065839 Rpdx1_3609 Rhodopseudomonas palustris DX-1 gene transfer agent (GTA)-like protein YP_004109911.1 3872629 R 652103 CDS YP_004109912.1 316934930 10065840 complement(3873219..3873419) 1 NC_014834.1 KEGG: oca:OCAR_6592 hypothetical protein; hypothetical protein 3873419 10065840 Rpdx1_3610 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109912.1 3873219 R 652103 CDS YP_004109913.1 316934931 10065841 complement(3873416..3873733) 1 NC_014834.1 KEGG: nha:Nham_1420 gene transfer agent (GTA) like protein; gene transfer agent (GTA)-like protein 3873733 10065841 Rpdx1_3611 Rhodopseudomonas palustris DX-1 gene transfer agent (GTA)-like protein YP_004109913.1 3873416 R 652103 CDS YP_004109914.1 316934932 10065842 complement(3873743..3874150) 1 NC_014834.1 TIGRFAM: phage major tail protein, TP901-1 family; KEGG: nha:Nham_1419 phage major tail protein, TP901-1; phage major tail protein, TP901-1 family 3874150 10065842 Rpdx1_3612 Rhodopseudomonas palustris DX-1 phage major tail protein, TP901-1 family YP_004109914.1 3873743 R 652103 CDS YP_004109915.1 316934933 10065843 complement(3874163..3874573) 1 NC_014834.1 KEGG: oca:OCAR_6595 gene transfer agent; hypothetical protein 3874573 10065843 Rpdx1_3613 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109915.1 3874163 R 652103 CDS YP_004109916.1 316934934 10065844 complement(3874570..3874890) 1 NC_014834.1 TIGRFAM: phage head-tail adaptor; KEGG: oca:OCAR_6596 putative phage head-tail adaptor; phage head-tail adaptor 3874890 10065844 Rpdx1_3614 Rhodopseudomonas palustris DX-1 phage head-tail adaptor YP_004109916.1 3874570 R 652103 CDS YP_004109917.1 316934935 10065845 complement(3874887..3875456) 1 NC_014834.1 KEGG: nha:Nham_1417 phiE125 gp8 hypothetical protein; hypothetical protein 3875456 10065845 Rpdx1_3615 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109917.1 3874887 R 652103 CDS YP_004109918.1 316934936 10065846 3875518..3876285 1 NC_014834.1 KEGG: bbt:BBta_0650 putative serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap 3876285 10065846 Rpdx1_3616 Rhodopseudomonas palustris DX-1 peptidase S1 and S6 chymotrypsin/Hap YP_004109918.1 3875518 D 652103 CDS YP_004109919.1 316934937 10065847 3876370..3876681 1 NC_014834.1 KEGG: nwi:Nwi_1895 hypothetical protein; hypothetical protein 3876681 10065847 Rpdx1_3617 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109919.1 3876370 D 652103 CDS YP_004109920.1 316934938 10065848 complement(3876695..3877990) 1 NC_014834.1 KEGG: azc:AZC_1105 hypothetical protein; hypothetical protein 3877990 10065848 Rpdx1_3618 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109920.1 3876695 R 652103 CDS YP_004109921.1 316934939 10065849 complement(3877932..3878888) 1 NC_014834.1 KEGG: oca:OCAR_6612 hypothetical protein; hypothetical protein 3878888 10065849 Rpdx1_3619 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109921.1 3877932 R 652103 CDS YP_004109922.1 316934940 10065850 3879058..3879324 1 NC_014834.1 KEGG: mpo:Mpop_5347 HicB family protein; hypothetical protein 3879324 10065850 Rpdx1_3620 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109922.1 3879058 D 652103 CDS YP_004109923.1 316934941 10065851 complement(3879321..3879413) 1 NC_014834.1 hypothetical protein 3879413 10065851 Rpdx1_3621 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109923.1 3879321 R 652103 CDS YP_004109924.1 316934942 10065852 3879512..3880636 1 NC_014834.1 KEGG: deh:cbdb_A1489 hypothetical protein; hypothetical protein 3880636 10065852 Rpdx1_3622 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109924.1 3879512 D 652103 CDS YP_004109925.1 316934943 10065853 complement(3880642..3882129) 1 NC_014834.1 KEGG: sth:STH1310 site-specific DNA-methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 3882129 10065853 Rpdx1_3623 Rhodopseudomonas palustris DX-1 DNA-cytosine methyltransferase YP_004109925.1 3880642 R 652103 CDS YP_004109926.1 316934944 10065854 complement(3882126..3882545) 1 NC_014834.1 manually curated; TIGRFAM: DNA mismatch endonuclease Vsr; KEGG: pmb:A9601_04271 hypothetical protein; PFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease Vsr 3882545 10065854 Rpdx1_3624 Rhodopseudomonas palustris DX-1 DNA mismatch endonuclease Vsr YP_004109926.1 3882126 R 652103 CDS YP_004109927.1 316934945 10065855 complement(3882946..3883317) 1 NC_014834.1 PFAM: Domain of unknown function DUF2019; KEGG: mes:Meso_2040 hypothetical protein; hypothetical protein 3883317 10065855 Rpdx1_3625 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109927.1 3882946 R 652103 CDS YP_004109928.1 316934946 10065856 complement(3883314..3884207) 1 NC_014834.1 KEGG: nwi:Nwi_1168 hypothetical protein; hypothetical protein 3884207 10065856 Rpdx1_3626 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109928.1 3883314 R 652103 CDS YP_004109929.1 316934947 10065857 complement(3884487..3885743) 1 NC_014834.1 TIGRFAM: phage major capsid protein, HK97 family; KEGG: oca:OCAR_6602 phage major capsid protein, HK97 family; phage major capsid protein, HK97 family 3885743 10065857 Rpdx1_3627 Rhodopseudomonas palustris DX-1 phage major capsid protein, HK97 family YP_004109929.1 3884487 R 652103 CDS YP_004109930.1 316934948 10065859 complement(3886708..3886887) 1 NC_014834.1 KEGG: nha:Nham_1412 hypothetical protein; hypothetical protein 3886887 10065859 Rpdx1_3629 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109930.1 3886708 R 652103 CDS YP_004109931.1 316934949 10065860 complement(3886892..3887092) 1 NC_014834.1 KEGG: nha:Nham_1411 hypothetical protein; hypothetical protein 3887092 10065860 Rpdx1_3630 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109931.1 3886892 R 652103 CDS YP_004109932.1 316934950 10065861 complement(3887185..3887778) 1 NC_014834.1 KEGG: psl:Psta_3457 hypothetical protein; hypothetical protein 3887778 10065861 Rpdx1_3631 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109932.1 3887185 R 652103 CDS YP_004109933.1 316934951 10065862 complement(3887895..3889070) 1 NC_014834.1 KEGG: oca:OCAR_6609 phage portal protein, HK97 family; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; phage portal protein, HK97 family 3889070 10065862 Rpdx1_3632 Rhodopseudomonas palustris DX-1 phage portal protein, HK97 family YP_004109933.1 3887895 R 652103 CDS YP_004109934.1 316934952 10065863 complement(3889417..3889569) 1 NC_014834.1 KEGG: bra:BRADO2727 hypothetical protein; hypothetical protein 3889569 10065863 Rpdx1_3633 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109934.1 3889417 R 652103 CDS YP_004109935.1 316934953 10065864 complement(3890096..3890260) 1 NC_014834.1 PFAM: Flp/Fap pilin component; KEGG: nha:Nham_0394 Flp/Fap pilin component; Flp/Fap pilin component 3890260 10065864 Rpdx1_3634 Rhodopseudomonas palustris DX-1 Flp/Fap pilin component YP_004109935.1 3890096 R 652103 CDS YP_004109936.1 316934954 10065865 complement(3890366..3891763) 1 NC_014834.1 KEGG: nha:Nham_0909 hypothetical protein; hypothetical protein 3891763 10065865 Rpdx1_3635 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109936.1 3890366 R 652103 CDS YP_004109937.1 316934955 10065866 complement(3891892..3893481) 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3058 major facilitator superfamily permease; major facilitator superfamily protein 3893481 10065866 Rpdx1_3636 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004109937.1 3891892 R 652103 CDS YP_004109938.1 316934956 10065867 3893692..3894759 1 NC_014834.1 PFAM: Choloylglycine hydrolase; KEGG: gdj:Gdia_2282 choloylglycine hydrolase; choloylglycine hydrolase 3894759 10065867 Rpdx1_3637 Rhodopseudomonas palustris DX-1 choloylglycine hydrolase YP_004109938.1 3893692 D 652103 CDS YP_004109939.1 316934957 10065868 complement(3894891..3895640) 1 NC_014834.1 KEGG: tva:TVAG_124720 hypothetical protein; hypothetical protein 3895640 10065868 Rpdx1_3638 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109939.1 3894891 R 652103 CDS YP_004109940.1 316934958 10065869 complement(3895717..3896016) 1 NC_014834.1 KEGG: sme:SMc04432 hypothetical protein; hypothetical protein 3896016 10065869 Rpdx1_3639 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109940.1 3895717 R 652103 CDS YP_004109941.1 316934959 10065870 complement(3896009..3896260) 1 NC_014834.1 PFAM: protein of unknown function DUF497; KEGG: rsp:RSP_2763 hypothetical protein; hypothetical protein 3896260 10065870 Rpdx1_3640 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109941.1 3896009 R 652103 CDS YP_004109942.1 316934960 10065871 3896393..3897565 1 NC_014834.1 KEGG: bra:BRADO4091 putative beta-lactamase family protein; putative 6-aminohexanoate-dimer hydrolase; PFAM: beta-lactamase; 6-aminohexanoate-dimer hydrolase 3897565 10065871 Rpdx1_3641 Rhodopseudomonas palustris DX-1 6-aminohexanoate-dimer hydrolase YP_004109942.1 3896393 D 652103 CDS YP_004109943.1 316934961 10065872 complement(3897883..3899175) 1 NC_014834.1 KEGG: mch:Mchl_5652 hypothetical protein; hypothetical protein 3899175 10065872 Rpdx1_3642 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109943.1 3897883 R 652103 CDS YP_004109944.1 316934962 10065873 complement(3899202..3901238) 1 NC_014834.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mch:Mchl_5651 peptidase S8 and S53 subtilisin kexin sedolisin; peptidase S8 and S53 subtilisin kexin sedolisin 3901238 10065873 Rpdx1_3643 Rhodopseudomonas palustris DX-1 peptidase S8 and S53 subtilisin kexin sedolisin YP_004109944.1 3899202 R 652103 CDS YP_004109945.1 316934963 10065874 complement(3901308..3902447) 1 NC_014834.1 PFAM: Patatin; KEGG: bra:BRADO1558 alpha-beta hydrolase family esterase; patatin 3902447 10065874 Rpdx1_3644 Rhodopseudomonas palustris DX-1 patatin YP_004109945.1 3901308 R 652103 CDS YP_004109946.1 316934964 10065875 3903093..3905405 1 NC_014834.1 KEGG: rru:Rru_A2395 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 3905405 10065875 Rpdx1_3645 Rhodopseudomonas palustris DX-1 TonB-dependent siderophore receptor YP_004109946.1 3903093 D 652103 CDS YP_004109947.1 316934965 10065876 3905402..3906547 1 NC_014834.1 KEGG: bbt:BBta_2666 putative uncharacterized iron-regulated membrane protein; putative iron-regulated membrane protein 3906547 10065876 Rpdx1_3646 Rhodopseudomonas palustris DX-1 putative iron-regulated membrane protein YP_004109947.1 3905402 D 652103 CDS YP_004109948.1 316934966 10065877 3906544..3906750 1 NC_014834.1 KEGG: pfs:PFLU5631 hypothetical protein; hypothetical protein 3906750 10065877 Rpdx1_3647 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109948.1 3906544 D 652103 CDS YP_004109949.1 316934967 10065878 complement(3907028..3907981) 1 NC_014834.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein; Integrase catalytic subunit 3907981 10065878 Rpdx1_3648 Rhodopseudomonas palustris DX-1 Integrase catalytic subunit YP_004109949.1 3907028 R 652103 CDS YP_004109950.1 316934968 10065880 complement(3908277..3909491) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr1050 branched chain amino acid transport system substrate binding protein; extracellular ligand-binding receptor 3909491 10065880 Rpdx1_3650 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004109950.1 3908277 R 652103 CDS YP_004109951.1 316934969 10065881 complement(3909567..3909887) 1 NC_014834.1 PFAM: ferredoxin; KEGG: bja:blr1049 ferrodoxin; ferredoxin 3909887 10065881 Rpdx1_3651 Rhodopseudomonas palustris DX-1 ferredoxin YP_004109951.1 3909567 R 652103 CDS YP_004109952.1 316934970 10065882 complement(3909897..3911135) 1 NC_014834.1 PFAM: cytochrome P450; KEGG: bbt:BBta_0729 putative cytochrome P450; cytochrome P450 3911135 10065882 Rpdx1_3652 Rhodopseudomonas palustris DX-1 cytochrome P450 YP_004109952.1 3909897 R 652103 CDS YP_004109953.1 316934971 10065883 3911215..3911730 1 NC_014834.1 KEGG: bja:bll1047 transcriptional regulatory protein; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 3911730 10065883 Rpdx1_3653 Rhodopseudomonas palustris DX-1 MarR family transcriptional regulator YP_004109953.1 3911215 D 652103 CDS YP_004109954.1 316934972 10065884 complement(3912024..3912767) 1 NC_014834.1 PFAM: protein of unknown function DUF81; KEGG: bch:Bcen2424_3236 hypothetical protein; hypothetical protein 3912767 10065884 Rpdx1_3654 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109954.1 3912024 R 652103 CDS YP_004109955.1 316934973 10065885 complement(3912821..3913333) 1 NC_014834.1 PFAM: protein of unknown function UPF0153; KEGG: bja:blr3103 hypothetical protein; hypothetical protein 3913333 10065885 Rpdx1_3655 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109955.1 3912821 R 652103 CDS YP_004109956.1 316934974 10065886 3913602..3915884 1 NC_014834.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: bra:BRADO2718 putative penicillin-binding protein (MrcA-like); PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 3915884 10065886 Rpdx1_3656 Rhodopseudomonas palustris DX-1 penicillin-binding protein YP_004109956.1 3913602 D 652103 CDS YP_004109957.1 316934975 10065887 3915928..3916506 1 NC_014834.1 PFAM: protein of unknown function DUF1214; KEGG: bra:BRADO2717 putative signal peptide; hypothetical protein 3916506 10065887 Rpdx1_3657 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109957.1 3915928 D 652103 CDS YP_004109958.1 316934976 10065888 3916503..3917069 1 NC_014834.1 KEGG: bja:bll3100 hypothetical protein; hypothetical protein 3917069 10065888 Rpdx1_3658 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109958.1 3916503 D 652103 CDS YP_004109959.1 316934977 10065889 complement(3917096..3917878) 1 NC_014834.1 KEGG: nwi:Nwi_1147 hypothetical protein; hypothetical protein 3917878 10065889 Rpdx1_3659 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109959.1 3917096 R 652103 CDS YP_004109960.1 316934978 10065890 complement(3917896..3918096) 1 NC_014834.1 KEGG: oca:OCAR_6625 hypothetical protein; hypothetical protein 3918096 10065890 Rpdx1_3660 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109960.1 3917896 R 652103 CDS YP_004109961.1 316934979 10065891 3918187..3918801 1 NC_014834.1 KEGG: bja:blr5578 hypothetical protein; hypothetical protein 3918801 10065891 Rpdx1_3661 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109961.1 3918187 D 652103 CDS YP_004109962.1 316934980 10065892 3918880..3919950 1 NC_014834.1 PFAM: polysaccharide deacetylase; KEGG: nha:Nham_1255 polysaccharide deacetylase; polysaccharide deacetylase 3919950 10065892 Rpdx1_3662 Rhodopseudomonas palustris DX-1 polysaccharide deacetylase YP_004109962.1 3918880 D 652103 CDS YP_004109963.1 316934981 10065893 3920103..3921077 1 NC_014834.1 KEGG: nha:Nham_1399 hypothetical protein; hypothetical protein 3921077 10065893 Rpdx1_3663 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109963.1 3920103 D 652103 CDS YP_004109964.1 316934982 10065894 complement(3921309..3921650) 1 NC_014834.1 PFAM: protein of unknown function DUF1491; KEGG: bbt:BBta_3047 hypothetical protein; hypothetical protein 3921650 10065894 Rpdx1_3664 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109964.1 3921309 R 652103 CDS YP_004109965.1 316934983 10065895 complement(3921793..3922524) 1 NC_014834.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: bra:BRADO2709 hypothetical protein; peptidoglycan-binding domain 1 protein 3922524 10065895 Rpdx1_3665 Rhodopseudomonas palustris DX-1 peptidoglycan-binding domain 1 protein YP_004109965.1 3921793 R 652103 CDS YP_004109966.1 316934984 10065896 complement(3922601..3924424) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: bra:BRADO2708 sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; multi-sensor signal transduction histidine kinase 3924424 10065896 Rpdx1_3666 Rhodopseudomonas palustris DX-1 multi-sensor signal transduction histidine kinase YP_004109966.1 3922601 R 652103 CDS YP_004109967.1 316934985 10065897 3924830..3925252 1 NC_014834.1 KEGG: bra:BRADO2707 hypothetical protein; hypothetical protein 3925252 10065897 Rpdx1_3667 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109967.1 3924830 D 652103 CDS YP_004109968.1 316934986 10065898 3925368..3925796 1 NC_014834.1 PFAM: Fe-S metabolism associated SufE; KEGG: bbt:BBta_3043 putative SufE-like protein; Fe-S metabolism associated SufE 3925796 10065898 Rpdx1_3668 Rhodopseudomonas palustris DX-1 Fe-S metabolism associated SufE YP_004109968.1 3925368 D 652103 CDS YP_004109969.1 316934987 10065899 complement(3925828..3926442) 1 NC_014834.1 KEGG: nwi:Nwi_2226 DNA replication initiation ATPase; DNA replication initiation ATPase 3926442 10065899 Rpdx1_3669 Rhodopseudomonas palustris DX-1 DNA replication initiation ATPase YP_004109969.1 3925828 R 652103 CDS YP_004109970.1 316934988 10065900 complement(3926563..3927198) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: rlg:Rleg_0120 transcriptional regulator, TetR family; regulatory protein TetR 3927198 10065900 Rpdx1_3670 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004109970.1 3926563 R 652103 CDS YP_004109971.1 316934989 10065901 3927280..3928020 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mdi:METDI4223 putative short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3928020 10065901 Rpdx1_3671 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004109971.1 3927280 D 652103 CDS YP_004109972.1 316934990 10065902 complement(3928028..3928444) 1 NC_014834.1 PFAM: ROSMUCR transcriptional regulator; KEGG: nha:Nham_2627 MucR family transcriptional regulator; MucR family transcriptional regulator 3928444 10065902 Rpdx1_3672 Rhodopseudomonas palustris DX-1 MucR family transcriptional regulator YP_004109972.1 3928028 R 652103 CDS YP_004109973.1 316934991 10065903 complement(3928644..3929606) 1 NC_014834.1 KEGG: bja:blr3067 hypothetical protein; hypothetical protein 3929606 10065903 Rpdx1_3673 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109973.1 3928644 R 652103 CDS YP_004109974.1 316934992 10065904 3929841..3930623 1 NC_014834.1 PFAM: class II aldolase/adducin family protein; KEGG: bra:BRADO2701 aldolase II superfamily protein; class II aldolase/adducin family protein 3930623 10065904 Rpdx1_3674 Rhodopseudomonas palustris DX-1 class II aldolase/adducin family protein YP_004109974.1 3929841 D 652103 CDS YP_004109975.1 316934993 10065905 complement(3931083..3932084) 1 NC_014834.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sme:SM_b20636 putative transposase of insertion sequence ISRm19 protein; transposase IS116/IS110/IS902 family protein 3932084 10065905 Rpdx1_3675 Rhodopseudomonas palustris DX-1 transposase IS116/IS110/IS902 family protein YP_004109975.1 3931083 R 652103 CDS YP_004109976.1 316934994 10065906 complement(3932396..3932689) 1 NC_014834.1 KEGG: oca:OCAR_4725 hypothetical protein; hypothetical protein 3932689 10065906 Rpdx1_3676 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109976.1 3932396 R 652103 CDS YP_004109977.1 316934995 10065907 complement(3932686..3934305) 1 NC_014834.1 KEGG: oca:OCAR_4724 PepSY-associated TM helix; PepSY-associated TM helix family protein 3934305 10065907 Rpdx1_3677 Rhodopseudomonas palustris DX-1 PepSY-associated TM helix family protein YP_004109977.1 3932686 R 652103 CDS YP_004109978.1 316934996 10065908 complement(3934334..3934615) 1 NC_014834.1 KEGG: oca:OCAR_4723 hypothetical protein; hypothetical protein 3934615 10065908 Rpdx1_3678 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109978.1 3934334 R 652103 CDS YP_004109979.1 316934997 10065909 complement(3934612..3935346) 1 NC_014834.1 KEGG: oca:OCAR_4722 hypothetical protein; hypothetical protein 3935346 10065909 Rpdx1_3679 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109979.1 3934612 R 652103 CDS YP_004109980.1 316934998 10065910 complement(3935421..3937739) 1 NC_014834.1 KEGG: oca:OCAR_4721 ferrichrome receptor FcuA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 3937739 10065910 Rpdx1_3680 Rhodopseudomonas palustris DX-1 TonB-dependent siderophore receptor YP_004109980.1 3935421 R 652103 CDS YP_004109981.1 316934999 10065911 complement(3938076..3939482) 1 NC_014834.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: nha:Nham_2629 hypothetical protein; peptidase M20 3939482 10065911 Rpdx1_3681 Rhodopseudomonas palustris DX-1 peptidase M20 YP_004109981.1 3938076 R 652103 CDS YP_004109982.1 316935000 10065912 complement(3939685..3941295) 1 NC_014834.1 PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: bra:BRADO2688 putative ATPase; hypothetical protein 3941295 10065912 Rpdx1_3682 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109982.1 3939685 R 652103 CDS YP_004109983.1 316935001 10065913 3941632..3942003 1 NC_014834.1 KEGG: bja:bll3061 hypothetical protein; hypothetical protein 3942003 10065913 Rpdx1_3683 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109983.1 3941632 D 652103 CDS YP_004109984.1 316935002 10065914 3942022..3942429 1 NC_014834.1 KEGG: nwi:Nwi_2232 hypothetical protein; hypothetical protein 3942429 10065914 Rpdx1_3684 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109984.1 3942022 D 652103 CDS YP_004109985.1 316935003 10065915 3942495..3943352 1 NC_014834.1 TIGRFAM: dihydropteroate synthase; KEGG: nha:Nham_2633 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 3943352 10065915 Rpdx1_3685 Rhodopseudomonas palustris DX-1 dihydropteroate synthase YP_004109985.1 3942495 D 652103 CDS YP_004109986.1 316935004 10065916 3943349..3943714 1 NC_014834.1 KEGG: oca:OCAR_6643 dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 3943714 10065916 Rpdx1_3686 Rhodopseudomonas palustris DX-1 dihydroneopterin aldolase YP_004109986.1 3943349 D 652103 CDS YP_004109987.1 316935005 10065917 3943716..3944207 1 NC_014834.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: nha:Nham_2635 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3944207 10065917 Rpdx1_3687 Rhodopseudomonas palustris DX-1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_004109987.1 3943716 D 652103 CDS YP_004109988.1 316935006 10065918 3944366..3946237 1 NC_014834.1 KEGG: bja:bll3056 methylmalonyl-CoA mutase small subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase 3946237 10065918 Rpdx1_3688 Rhodopseudomonas palustris DX-1 methylmalonyl-CoA mutase YP_004109988.1 3944366 D 652103 CDS YP_004109989.1 316935007 10065919 3946234..3946698 1 NC_014834.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: bra:BRADO2681 putative glutathione-dependent formaldehyde-activating (GFA); glutathione-dependent formaldehyde-activating protein 3946698 10065919 Rpdx1_3689 Rhodopseudomonas palustris DX-1 glutathione-dependent formaldehyde-activating protein YP_004109989.1 3946234 D 652103 CDS YP_004109990.1 316935008 10065920 3946761..3948920 1 NC_014834.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: bbt:BBta_3021 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit 3948920 10065920 Rpdx1_3690 Rhodopseudomonas palustris DX-1 methylmalonyl-CoA mutase large subunit YP_004109990.1 3946761 D 652103 CDS YP_004109991.1 316935009 10065921 3948983..3949240 1 NC_014834.1 TIGRFAM: prevent-host-death family protein; KEGG: gvi:gsl1680 hypothetical protein; prevent-host-death family protein 3949240 10065921 Rpdx1_3691 Rhodopseudomonas palustris DX-1 prevent-host-death family protein YP_004109991.1 3948983 D 652103 CDS YP_004109992.1 316935010 10065922 3949237..3949647 1 NC_014834.1 PFAM: PilT protein domain protein; KEGG: gvi:gll1679 hypothetical protein; PilT domain-containing protein 3949647 10065922 Rpdx1_3692 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004109992.1 3949237 D 652103 CDS YP_004109993.1 316935011 10065923 3949683..3949997 1 NC_014834.1 PFAM: DNA polymerase beta domain protein region; KEGG: bja:bsl3053 hypothetical protein; DNA polymerase beta domain-containing protein 3949997 10065923 Rpdx1_3693 Rhodopseudomonas palustris DX-1 DNA polymerase beta domain-containing protein YP_004109993.1 3949683 D 652103 CDS YP_004109994.1 316935012 10065924 3949999..3950343 1 NC_014834.1 PFAM: protein of unknown function DUF86; KEGG: rce:RC1_2668 hypothetical protein; hypothetical protein 3950343 10065924 Rpdx1_3694 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109994.1 3949999 D 652103 CDS YP_004109995.1 316935013 10065925 3950340..3951128 1 NC_014834.1 KEGG: bja:bll3052 hypothetical protein; hypothetical protein 3951128 10065925 Rpdx1_3695 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004109995.1 3950340 D 652103 CDS YP_004109996.1 316935014 10065926 3951112..3952104 1 NC_014834.1 KEGG: bbt:BBta_3019 arginine/ornithine transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; LAO/AO transporter ATPase 3952104 10065926 Rpdx1_3696 Rhodopseudomonas palustris DX-1 LAO/AO transporter ATPase YP_004109996.1 3951112 D 652103 CDS YP_004109997.1 316935015 10065927 3952101..3952748 1 NC_014834.1 PFAM: peptidase C15 pyroglutamyl peptidase I; KEGG: nwi:Nwi_2241 peptidase C15, pyroglutamyl peptidase I; peptidase C15 pyroglutamyl peptidase I 3952748 10065927 Rpdx1_3697 Rhodopseudomonas palustris DX-1 peptidase C15 pyroglutamyl peptidase I YP_004109997.1 3952101 D 652103 CDS YP_004109998.1 316935016 10065928 3952866..3954224 1 NC_014834.1 KEGG: nha:Nham_2646 nitrous oxidase accessory protein; nitrous oxidase accessory protein 3954224 10065928 Rpdx1_3698 Rhodopseudomonas palustris DX-1 nitrous oxidase accessory protein YP_004109998.1 3952866 D 652103 CDS YP_004109999.1 316935017 10065929 complement(3954332..3956641) 1 NC_014834.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: azc:AZC_1341 TonB dependent receptor; TonB-dependent receptor 3956641 10065929 Rpdx1_3699 Rhodopseudomonas palustris DX-1 TonB-dependent receptor YP_004109999.1 3954332 R 652103 CDS YP_004110000.1 316935018 10065930 complement(3956797..3957255) 1 NC_014834.1 KEGG: bbt:BBta_4535 hypothetical protein; hypothetical protein 3957255 10065930 Rpdx1_3700 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110000.1 3956797 R 652103 CDS YP_004110001.1 316935019 10065931 complement(3957471..3959537) 1 NC_014834.1 KEGG: bja:blr2506 putative chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3959537 10065931 Rpdx1_3701 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004110001.1 3957471 R 652103 CDS YP_004110002.1 316935020 10065932 complement(3959978..3960496) 1 NC_014834.1 TIGRFAM: hypothetical protein; KEGG: nwi:Nwi_2244 hypothetical protein; hypothetical protein 3960496 10065932 Rpdx1_3702 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110002.1 3959978 R 652103 CDS YP_004110003.1 316935021 10065933 complement(3961034..3961858) 1 NC_014834.1 KEGG: bbt:BBta_3012 hypothetical protein; hypothetical protein 3961858 10065933 Rpdx1_3703 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110003.1 3961034 R 652103 CDS YP_004110004.1 316935022 10065934 complement(3961855..3962424) 1 NC_014834.1 KEGG: bbt:BBta_3011 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 3962424 10065934 Rpdx1_3704 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004110004.1 3961855 R 652103 CDS YP_004110005.1 316935023 10065935 3962871..3963950 1 NC_014834.1 SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: bbt:BBta_3010 diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 3963950 10065935 Rpdx1_3705 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004110005.1 3962871 D 652103 CDS YP_004110006.1 316935024 10065936 3963987..3965099 1 NC_014834.1 PFAM: Protein of unknown function DUF2336; KEGG: nha:Nham_2660 hypothetical protein; hypothetical protein 3965099 10065936 Rpdx1_3706 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110006.1 3963987 D 652103 CDS YP_004110007.1 316935025 10065937 complement(3965121..3967340) 1 NC_014834.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE2140 TonB-dependent receptor protein; TonB-dependent receptor 3967340 10065937 Rpdx1_3707 Rhodopseudomonas palustris DX-1 TonB-dependent receptor YP_004110007.1 3965121 R 652103 CDS YP_004110008.1 316935026 10065938 complement(3967353..3969578) 1 NC_014834.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_2201 TonB-dependent receptor; TonB-dependent receptor 3969578 10065938 Rpdx1_3708 Rhodopseudomonas palustris DX-1 TonB-dependent receptor YP_004110008.1 3967353 R 652103 CDS YP_004110009.1 316935027 10065940 complement(3970104..3970742) 1 NC_014834.1 PFAM: protein of unknown function DUF1109; KEGG: bbt:BBta_3008 hypothetical protein; hypothetical protein 3970742 10065940 Rpdx1_3710 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110009.1 3970104 R 652103 CDS YP_004110010.1 316935028 10065941 complement(3970747..3971292) 1 NC_014834.1 KEGG: bja:blr3038 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 3971292 10065941 Rpdx1_3711 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004110010.1 3970747 R 652103 CDS YP_004110011.1 316935029 10065942 3971545..3972228 1 NC_014834.1 KEGG: bja:bll3037 hypothetical protein; hypothetical protein 3972228 10065942 Rpdx1_3712 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110011.1 3971545 D 652103 CDS YP_004110012.1 316935030 10065943 3972314..3973093 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:bll3036 enoyl CoA hydratase; enoyl-CoA hydratase/isomerase 3973093 10065943 Rpdx1_3713 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110012.1 3972314 D 652103 CDS YP_004110013.1 316935031 10065944 3973290..3974708 1 NC_014834.1 KEGG: bbt:BBta_3004 putative outer TolC membrane protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion membrane fusion protein 3974708 10065944 Rpdx1_3714 Rhodopseudomonas palustris DX-1 TolC family type I secretion membrane fusion protein YP_004110013.1 3973290 D 652103 CDS YP_004110014.1 316935032 10065945 complement(3974987..3975301) 1 NC_014834.1 manually curated; KEGG: bbt:BBta_5457 hypothetical protein; hypothetical protein 3975301 10065945 Rpdx1_3715 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110014.1 3974987 R 652103 CDS YP_004110015.1 316935033 10065946 complement(3975500..3978622) 1 NC_014834.1 KEGG: bbt:BBta_2989 putative cation/heavy metal efflux system protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump 3978622 10065946 Rpdx1_3716 Rhodopseudomonas palustris DX-1 CzcA family heavy metal efflux pump YP_004110015.1 3975500 R 652103 CDS YP_004110016.1 316935034 10065947 complement(3978778..3980016) 1 NC_014834.1 KEGG: bja:blr3031 hypothetical protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3980016 10065947 Rpdx1_3717 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004110016.1 3978778 R 652103 CDS YP_004110017.1 316935035 10065948 complement(3980233..3981630) 1 NC_014834.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr3030 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F 3981630 10065948 Rpdx1_3718 Rhodopseudomonas palustris DX-1 L-carnitine dehydratase/bile acid-inducible protein F YP_004110017.1 3980233 R 652103 CDS YP_004110018.1 316935036 10065949 complement(3981912..3983276) 1 NC_014834.1 KEGG: bja:blr4803 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 3983276 10065949 Rpdx1_3719 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004110018.1 3981912 R 652103 CDS YP_004110019.1 316935037 10065950 complement(3983273..3983947) 1 NC_014834.1 KEGG: bja:blr4802 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 3983947 10065950 Rpdx1_3720 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004110019.1 3983273 R 652103 CDS YP_004110020.1 316935038 10065952 complement(3984216..3985259) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: bja:bll8163 glycosyl transferase; glycosyl transferase group 1 protein 3985259 10065952 Rpdx1_3722 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004110020.1 3984216 R 652103 CDS YP_004110021.1 316935039 10065953 complement(3985259..3986371) 1 NC_014834.1 PFAM: metallophosphoesterase; KEGG: bja:bll8164 hypothetical protein; metallophosphoesterase 3986371 10065953 Rpdx1_3723 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004110021.1 3985259 R 652103 CDS YP_004110022.1 316935040 10065954 complement(3986368..3987027) 1 NC_014834.1 PFAM: SNARE associated Golgi protein; KEGG: bja:bll8165 putative alkaline phosphatase protein; hypothetical protein 3987027 10065954 Rpdx1_3724 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110022.1 3986368 R 652103 CDS YP_004110023.1 316935041 10065955 complement(3987038..3987613) 1 NC_014834.1 PFAM: ribosomal RNA adenine methylase transferase; KEGG: bja:bll8166 phospholipid N-methyltransferase; ribosomal RNA adenine methylase transferase 3987613 10065955 Rpdx1_3725 Rhodopseudomonas palustris DX-1 ribosomal RNA adenine methylase transferase YP_004110023.1 3987038 R 652103 CDS YP_004110024.1 316935042 10065956 complement(3988395..3991937) 1 NC_014834.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: bja:blr3026 error-prone DNA polymerase; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III subunit alpha 3991937 10065956 Rpdx1_3726 Rhodopseudomonas palustris DX-1 DNA polymerase III subunit alpha YP_004110024.1 3988395 R 652103 CDS YP_004110025.1 316935043 10065957 complement(3992120..3993556) 1 NC_014834.1 manually curated; KEGG: nha:Nham_2667 hypothetical protein; hypothetical protein 3993556 10065957 Rpdx1_3727 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110025.1 3992120 R 652103 CDS YP_004110026.1 316935044 10065958 complement(3993609..3994394) 1 NC_014834.1 KEGG: bra:BRADO2645 hypothetical protein; hypothetical protein 3994394 10065958 Rpdx1_3728 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110026.1 3993609 R 652103 CDS YP_004110027.1 316935045 10065959 3994563..3995801 1 NC_014834.1 KEGG: nwi:Nwi_2258 elongator protein 3/MiaB/NifB; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 3995801 10065959 Rpdx1_3729 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004110027.1 3994563 D 652103 CDS YP_004110028.1 316935046 10065960 3996032..3997585 1 NC_014834.1 KEGG: bbt:BBta_2983 putative uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; phage SPO1 DNA polymerase-like protein 3997585 10065960 Rpdx1_3730 Rhodopseudomonas palustris DX-1 phage SPO1 DNA polymerase-like protein YP_004110028.1 3996032 D 652103 CDS YP_004110029.1 316935047 10065961 3997805..3999040 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7827 ABC transporter substrate-binding protein; extracellular ligand-binding receptor 3999040 10065961 Rpdx1_3731 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004110029.1 3997805 D 652103 CDS YP_004110030.1 316935048 10065962 3999124..4000077 1 NC_014834.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein; Integrase catalytic subunit 4000077 10065962 Rpdx1_3732 Rhodopseudomonas palustris DX-1 Integrase catalytic subunit YP_004110030.1 3999124 D 652103 CDS YP_004110031.1 316935049 10065963 4000247..4001527 1 NC_014834.1 KEGG: nha:Nham_0659 hydroxypyruvate reductase; PFAM: MOFRL domain protein; hydroxypyruvate reductase 4001527 10065963 Rpdx1_3733 Rhodopseudomonas palustris DX-1 hydroxypyruvate reductase YP_004110031.1 4000247 D 652103 CDS YP_004110032.1 316935050 10065964 complement(4001781..4003355) 1 NC_014834.1 KEGG: bja:bll7624 adenylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase 4003355 10065964 Rpdx1_3734 Rhodopseudomonas palustris DX-1 adenylate/guanylate cyclase YP_004110032.1 4001781 R 652103 CDS YP_004110033.1 316935051 10065965 4003702..4005432 1 NC_014834.1 PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: bja:blr2614 hypothetical protein; sodium/hydrogen exchanger 4005432 10065965 Rpdx1_3735 Rhodopseudomonas palustris DX-1 sodium/hydrogen exchanger YP_004110033.1 4003702 D 652103 CDS YP_004110034.1 316935052 10065966 4005563..4006606 1 NC_014834.1 KEGG: bja:blr4053 hypothetical protein; hypothetical protein 4006606 10065966 Rpdx1_3736 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110034.1 4005563 D 652103 CDS YP_004110035.1 316935053 10065967 4006621..4007022 1 NC_014834.1 KEGG: bvi:Bcep1808_0573 hypothetical protein; hypothetical protein 4007022 10065967 Rpdx1_3737 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110035.1 4006621 D 652103 CDS YP_004110036.1 316935054 10065968 complement(4007047..4007565) 1 NC_014834.1 KEGG: bbt:BBta_7084 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 4007565 10065968 Rpdx1_3738 Rhodopseudomonas palustris DX-1 MarR family transcriptional regulator YP_004110036.1 4007047 R 652103 CDS YP_004110037.1 316935055 10065969 4007733..4008773 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bja:blr7832 ABC transporter permease protein; inner-membrane translocator 4008773 10065969 Rpdx1_3739 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110037.1 4007733 D 652103 CDS YP_004110038.1 316935056 10065970 4008779..4010548 1 NC_014834.1 KEGG: bbt:BBta_7086 ABC tranpsorter, permease protein / ATP-binding protein; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; ABC transporter-like protein 4010548 10065970 Rpdx1_3740 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110038.1 4008779 D 652103 CDS YP_004110039.1 316935057 10065971 4010545..4011264 1 NC_014834.1 KEGG: bja:blr7834 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4011264 10065971 Rpdx1_3741 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110039.1 4010545 D 652103 CDS YP_004110040.1 316935058 10065972 complement(4011202..4012056) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dma:DMR_43780 GGDEF domain protein; SMART: GGDEF domain containing protein; diguanylate cyclase 4012056 10065972 Rpdx1_3742 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004110040.1 4011202 R 652103 CDS YP_004110041.1 316935059 10065973 complement(4012369..4013526) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7848 substrate-binding protein; extracellular ligand-binding receptor 4013526 10065973 Rpdx1_3743 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004110041.1 4012369 R 652103 CDS YP_004110042.1 316935060 10065974 complement(4013606..4014025) 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bbt:BBta_7090 putative 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein 4014025 10065974 Rpdx1_3744 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004110042.1 4013606 R 652103 CDS YP_004110043.1 316935061 10065975 complement(4014163..4016058) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO0963 feruloyl-CoA synthase; AMP-dependent synthetase and ligase 4016058 10065975 Rpdx1_3745 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110043.1 4014163 R 652103 CDS YP_004110044.1 316935062 10065976 complement(4016070..4016876) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_7093 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4016876 10065976 Rpdx1_3746 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110044.1 4016070 R 652103 CDS YP_004110045.1 316935063 10065977 complement(4017170..4017631) 1 NC_014834.1 KEGG: bja:blr7842 hypothetical protein; hypothetical protein 4017631 10065977 Rpdx1_3747 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110045.1 4017170 R 652103 CDS YP_004110046.1 316935064 10065978 complement(4017753..4019060) 1 NC_014834.1 KEGG: bja:blr7841 hypothetical protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 4019060 10065978 Rpdx1_3748 Rhodopseudomonas palustris DX-1 TRAP dicarboxylate transporter subunit DctM YP_004110046.1 4017753 R 652103 CDS YP_004110047.1 316935065 10065979 complement(4019068..4019640) 1 NC_014834.1 KEGG: bbt:BBta_7097 TrapT family, DctQ subunit C4-dicarboxylate transport; TRAP dicarboxylate transporter subunit DctQ 4019640 10065979 Rpdx1_3749 Rhodopseudomonas palustris DX-1 TRAP dicarboxylate transporter subunit DctQ YP_004110047.1 4019068 R 652103 CDS YP_004110048.1 316935066 10065980 complement(4019788..4020816) 1 NC_014834.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: vap:Vapar_3913 TRAP dicarboxylate transporter-DctP subunit; family 7 extracellular solute-binding protein 4020816 10065980 Rpdx1_3750 Rhodopseudomonas palustris DX-1 family 7 extracellular solute-binding protein YP_004110048.1 4019788 R 652103 CDS YP_004110049.1 316935067 10065981 4020988..4022160 1 NC_014834.1 TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; KEGG: bja:bll7838 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding; 4-hydroxybenzoate 3-monooxygenase 4022160 10065981 Rpdx1_3751 Rhodopseudomonas palustris DX-1 4-hydroxybenzoate 3-monooxygenase YP_004110049.1 4020988 D 652103 CDS YP_004110050.1 316935068 10065982 4022417..4022866 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: pla:Plav_2272 thioesterase superfamily protein; thioesterase superfamily protein 4022866 10065982 Rpdx1_3752 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004110050.1 4022417 D 652103 CDS YP_004110051.1 316935069 10065983 complement(4023041..4023727) 1 NC_014834.1 KEGG: bja:blr2961 hypothetical protein; hypothetical protein 4023727 10065983 Rpdx1_3753 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110051.1 4023041 R 652103 CDS YP_004110052.1 316935070 10065984 complement(4023720..4025069) 1 NC_014834.1 PFAM: Amidase; KEGG: bja:blr2960 amidase; amidase 4025069 10065984 Rpdx1_3754 Rhodopseudomonas palustris DX-1 amidase YP_004110052.1 4023720 R 652103 CDS YP_004110053.1 316935071 10065985 4025362..4025775 1 NC_014834.1 PFAM: protein of unknown function DUF35; KEGG: bja:bll2959 hypothetical protein; hypothetical protein 4025775 10065985 Rpdx1_3755 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110053.1 4025362 D 652103 CDS YP_004110054.1 316935072 10065986 4025781..4026920 1 NC_014834.1 KEGG: bra:BRADO2584 hypothetical protein; hypothetical protein 4026920 10065986 Rpdx1_3756 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110054.1 4025781 D 652103 CDS YP_004110055.1 316935073 10065987 4027212..4028126 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2583 putative short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4028126 10065987 Rpdx1_3757 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110055.1 4027212 D 652103 CDS YP_004110056.1 316935074 10065988 complement(4028378..4029718) 1 NC_014834.1 PFAM: OmpA/MotB domain protein; KEGG: ara:Arad_8433 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4029718 10065988 Rpdx1_3758 Rhodopseudomonas palustris DX-1 OmpA/MotB domain-containing protein YP_004110056.1 4028378 R 652103 CDS YP_004110057.1 316935075 10065989 complement(4030126..4030455) 1 NC_014834.1 PFAM: small multidrug resistance protein; KEGG: xau:Xaut_3102 small multidrug resistance protein; small multidrug resistance protein 4030455 10065989 Rpdx1_3759 Rhodopseudomonas palustris DX-1 small multidrug resistance protein YP_004110057.1 4030126 R 652103 CDS YP_004110058.1 316935076 10065990 complement(4030570..4033380) 1 NC_014834.1 KEGG: bbt:BBta_2928 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region; phosphoenolpyruvate carboxylase 4033380 10065990 Rpdx1_3760 Rhodopseudomonas palustris DX-1 phosphoenolpyruvate carboxylase YP_004110058.1 4030570 R 652103 CDS YP_004110059.1 316935077 10065991 complement(4033480..4034280) 1 NC_014834.1 KEGG: nha:Nham_4237 hypothetical protein; hypothetical protein 4034280 10065991 Rpdx1_3761 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110059.1 4033480 R 652103 CDS YP_004110060.1 316935078 10065992 4034556..4035623 1 NC_014834.1 PFAM: Uncharacterised protein family UPF0324; KEGG: bra:BRADO0268 hypothetical protein; hypothetical protein 4035623 10065992 Rpdx1_3762 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110060.1 4034556 D 652103 CDS YP_004110061.1 316935079 10065993 4035620..4036510 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bid:Bind_2471 LysR family transcriptional regulator; LysR family transcriptional regulator 4036510 10065993 Rpdx1_3763 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004110061.1 4035620 D 652103 CDS YP_004110062.1 316935080 10065994 4036670..4039456 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: bja:bll4276 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; multi-sensor hybrid histidine kinase 4039456 10065994 Rpdx1_3764 Rhodopseudomonas palustris DX-1 multi-sensor hybrid histidine kinase YP_004110062.1 4036670 D 652103 CDS YP_004110063.1 316935081 10065995 complement(4039453..4040997) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr2951 acyl-CoA synthetase; AMP-dependent synthetase and ligase 4040997 10065995 Rpdx1_3765 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110063.1 4039453 R 652103 CDS YP_004110064.1 316935082 10065996 complement(4041145..4041957) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr2950 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4041957 10065996 Rpdx1_3766 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110064.1 4041145 R 652103 CDS YP_004110065.1 316935083 10065997 4042068..4042940 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO2577 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 4042940 10065997 Rpdx1_3767 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110065.1 4042068 D 652103 CDS YP_004110066.1 316935084 10065998 4043270..4044898 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO2576 acyl-CoA synthetase; AMP-dependent synthetase and ligase 4044898 10065998 Rpdx1_3768 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110066.1 4043270 D 652103 CDS YP_004110067.1 316935085 10065999 complement(4045174..4046448) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO2575 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4046448 10065999 Rpdx1_3769 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004110067.1 4045174 R 652103 CDS YP_004110068.1 316935086 10066000 4046574..4047353 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO2574 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4047353 10066000 Rpdx1_3770 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110068.1 4046574 D 652103 CDS YP_004110069.1 316935087 10066001 complement(4047584..4047982) 1 NC_014834.1 KEGG: bra:BRADO2573 hypothetical protein; hypothetical protein 4047982 10066001 Rpdx1_3771 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110069.1 4047584 R 652103 CDS YP_004110070.1 316935088 10066002 complement(4048001..4048996) 1 NC_014834.1 PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO2572 hypothetical protein; aminoglycoside phosphotransferase 4048996 10066002 Rpdx1_3772 Rhodopseudomonas palustris DX-1 aminoglycoside phosphotransferase YP_004110070.1 4048001 R 652103 CDS YP_004110071.1 316935089 10066003 complement(4049004..4049807) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO2571 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4049807 10066003 Rpdx1_3773 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110071.1 4049004 R 652103 CDS YP_004110072.1 316935090 10066004 4049976..4050755 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_2917 putative reductase; short-chain dehydrogenase/reductase SDR 4050755 10066004 Rpdx1_3774 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110072.1 4049976 D 652103 CDS YP_004110073.1 316935091 10066005 4050796..4052307 1 NC_014834.1 KEGG: bra:BRADO2565 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 4052307 10066005 Rpdx1_3775 Rhodopseudomonas palustris DX-1 acetyl-CoA acetyltransferase YP_004110073.1 4050796 D 652103 CDS YP_004110074.1 316935092 10066006 complement(4052313..4053089) 1 NC_014834.1 KEGG: bja:blr2929 hypothetical protein; PFAM: Xylose isomerase domain protein TIM barrel; hydroxypyruvate isomerase 4053089 10066006 Rpdx1_3776 Rhodopseudomonas palustris DX-1 hydroxypyruvate isomerase YP_004110074.1 4052313 R 652103 CDS YP_004110075.1 316935093 10066007 complement(4053152..4053406) 1 NC_014834.1 manually curated; KEGG: cyh:Cyan8802_3861 hypothetical protein; hypothetical protein 4053406 10066007 Rpdx1_3777 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110075.1 4053152 R 652103 CDS YP_004110076.1 316935094 10066008 complement(4053403..4053606) 1 NC_014834.1 manually curated; KEGG: afr:AFE_0072 hypothetical protein; hypothetical protein 4053606 10066008 Rpdx1_3778 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110076.1 4053403 R 652103 CDS YP_004110077.1 316935095 10066009 complement(4053643..4054347) 1 NC_014834.1 KEGG: bra:BRADO2543 high-affinity branched-chain amino acid transport protein (ABC transporter ATP-binding protein); PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4054347 10066009 Rpdx1_3779 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110077.1 4053643 R 652103 CDS YP_004110078.1 316935096 10066010 complement(4054331..4055065) 1 NC_014834.1 KEGG: bja:blr2925 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4055065 10066010 Rpdx1_3780 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110078.1 4054331 R 652103 CDS YP_004110079.1 316935097 10066011 complement(4055062..4056048) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_2886 putative ABC transporter permiase component; inner-membrane translocator 4056048 10066011 Rpdx1_3781 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110079.1 4055062 R 652103 CDS YP_004110080.1 316935098 10066012 complement(4056048..4056926) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bja:blr2923 amino acid ABC transporter permease protein; inner-membrane translocator 4056926 10066012 Rpdx1_3782 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110080.1 4056048 R 652103 CDS YP_004110081.1 316935099 10066013 complement(4057101..4058348) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO2539 putative branched-chain amino acid ABC transporter (substrate-binding protein); extracellular ligand-binding receptor 4058348 10066013 Rpdx1_3783 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004110081.1 4057101 R 652103 CDS YP_004110082.1 316935100 10066014 complement(4058406..4059224) 1 NC_014834.1 PFAM: protein of unknown function DUF1445; KEGG: bra:BRADO2538 hypothetical protein; hypothetical protein 4059224 10066014 Rpdx1_3784 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110082.1 4058406 R 652103 CDS YP_004110083.1 316935101 10066015 4059340..4060290 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:bll2920 transcriptional regulatory protein; LysR family transcriptional regulator 4060290 10066015 Rpdx1_3785 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004110083.1 4059340 D 652103 CDS YP_004110084.1 316935102 10066016 4060363..4061613 1 NC_014834.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: bja:bll2919 allantoate amidohydrolase; PFAM: peptidase M20; amidase 4061613 10066016 Rpdx1_3786 Rhodopseudomonas palustris DX-1 amidase YP_004110084.1 4060363 D 652103 CDS YP_004110085.1 316935103 10066017 4061654..4062568 1 NC_014834.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bbt:BBta_2880 putative phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 4062568 10066017 Rpdx1_3787 Rhodopseudomonas palustris DX-1 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004110085.1 4061654 D 652103 CDS YP_004110086.1 316935104 10066018 4062712..4063542 1 NC_014834.1 KEGG: bur:Bcep18194_A5663 DNA translocase FtsK; hypothetical protein 4063542 10066018 Rpdx1_3788 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110086.1 4062712 D 652103 CDS YP_004110087.1 316935105 10066019 complement(4063575..4064654) 1 NC_014834.1 TIGRFAM: tartrate dehydrogenase; KEGG: bja:blr2916 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 4064654 10066019 Rpdx1_3789 Rhodopseudomonas palustris DX-1 tartrate dehydrogenase YP_004110087.1 4063575 R 652103 CDS YP_004110088.1 316935106 10066020 4064847..4066097 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_4762 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4066097 10066020 Rpdx1_3790 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004110088.1 4064847 D 652103 CDS YP_004110089.1 316935107 10066021 4066260..4067039 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_2878 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4067039 10066021 Rpdx1_3791 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110089.1 4066260 D 652103 CDS YP_004110090.1 316935108 10066022 4067234..4068610 1 NC_014834.1 TIGRFAM: beta-galactosidase; KEGG: bja:blr4657 beta-glucosidase; PFAM: glycoside hydrolase family 1; beta-galactosidase 4068610 10066022 Rpdx1_3792 Rhodopseudomonas palustris DX-1 beta-galactosidase YP_004110090.1 4067234 D 652103 CDS YP_004110091.1 316935109 10066023 complement(4068626..4069738) 1 NC_014834.1 PFAM: ABC transporter domain protein; KEGG: bra:BRADO1574 putative ABC transporter-like; ABC transporter domain-containing protein 4069738 10066023 Rpdx1_3793 Rhodopseudomonas palustris DX-1 ABC transporter domain-containing protein YP_004110091.1 4068626 R 652103 CDS YP_004110092.1 316935110 10066024 4069877..4071310 1 NC_014834.1 PFAM: Amidase; KEGG: bra:BRADO2532 putative amidotransferase; amidase 4071310 10066024 Rpdx1_3794 Rhodopseudomonas palustris DX-1 amidase YP_004110092.1 4069877 D 652103 CDS YP_004110093.1 316935111 10066025 4071458..4072681 1 NC_014834.1 PFAM: OsmC family protein; KEGG: bja:bll2902 hypothetical protein; OsmC family protein 4072681 10066025 Rpdx1_3795 Rhodopseudomonas palustris DX-1 OsmC family protein YP_004110093.1 4071458 D 652103 CDS YP_004110094.1 316935112 10066026 4072733..4073695 1 NC_014834.1 PFAM: fatty acid desaturase; KEGG: ccs:CCNA_03535 fatty acid desaturase; fatty acid desaturase 4073695 10066026 Rpdx1_3796 Rhodopseudomonas palustris DX-1 fatty acid desaturase YP_004110094.1 4072733 D 652103 CDS YP_004110095.1 316935113 10066027 complement(4074147..4074884) 1 NC_014834.1 KEGG: cyn:Cyan7425_4713 hypothetical protein; hypothetical protein 4074884 10066027 Rpdx1_3797 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110095.1 4074147 R 652103 CDS YP_004110096.1 316935114 10066028 complement(4075114..4077153) 1 NC_014834.1 KEGG: xau:Xaut_0907 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase; MaoC domain protein dehydratase; phenylacetic acid degradation protein paaN 4077153 10066028 Rpdx1_3798 Rhodopseudomonas palustris DX-1 phenylacetic acid degradation protein paaN YP_004110096.1 4075114 R 652103 CDS YP_004110097.1 316935115 10066029 4077304..4078089 1 NC_014834.1 KEGG: mno:Mnod_3363 phenylacetate degradation, enoyl-CoA hydratase PaaB; TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase; phenylacetate degradation, enoyl-CoA hydratase paaB 4078089 10066029 Rpdx1_3799 Rhodopseudomonas palustris DX-1 phenylacetate degradation, enoyl-CoA hydratase paaB YP_004110097.1 4077304 D 652103 CDS YP_004110098.1 316935116 10066030 4078086..4078544 1 NC_014834.1 KEGG: bra:BRADO2525 phenylacetic acid degradation protein; TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; phenylacetic acid degradation protein PaaD 4078544 10066030 Rpdx1_3800 Rhodopseudomonas palustris DX-1 phenylacetic acid degradation protein PaaD YP_004110098.1 4078086 D 652103 CDS YP_004110099.1 316935117 10066031 4078559..4079890 1 NC_014834.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: bja:blr2897 phenylacetate-coenzyme A ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate-CoA ligase 4079890 10066031 Rpdx1_3801 Rhodopseudomonas palustris DX-1 phenylacetate-CoA ligase YP_004110099.1 4078559 D 652103 CDS YP_004110100.1 316935118 10066032 complement(4079897..4080547) 1 NC_014834.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: bbt:BBta_2936 DNA-N1-methyladenine dioxygenase; 2OG-Fe(II) oxygenase 4080547 10066032 Rpdx1_3802 Rhodopseudomonas palustris DX-1 2OG-Fe(II) oxygenase YP_004110100.1 4079897 R 652103 CDS YP_004110101.1 316935119 10066033 complement(4080547..4081464) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bja:blr7836 transcriptional regulatory protein; LysR family transcriptional regulator 4081464 10066033 Rpdx1_3803 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004110101.1 4080547 R 652103 CDS YP_004110102.1 316935120 10066034 4081567..4082646 1 NC_014834.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: dar:Daro_1523 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4082646 10066034 Rpdx1_3804 Rhodopseudomonas palustris DX-1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_004110102.1 4081567 D 652103 CDS YP_004110103.1 316935121 10066035 complement(4082592..4082999) 1 NC_014834.1 KEGG: nha:Nham_0655 hypothetical protein; hypothetical protein 4082999 10066035 Rpdx1_3805 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110103.1 4082592 R 652103 CDS YP_004110104.1 316935122 10066036 4083240..4083626 1 NC_014834.1 KEGG: sil:SPO0412 hypothetical protein; hypothetical protein 4083626 10066036 Rpdx1_3806 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110104.1 4083240 D 652103 CDS YP_004110105.1 316935123 10066037 complement(4083829..4086054) 1 NC_014834.1 SMART: GGDEF domain containing protein; TIGRFAM: diguanylate cyclase; KEGG: msl:Msil_0486 diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase 4086054 10066037 Rpdx1_3807 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004110105.1 4083829 R 652103 CDS YP_004110106.1 316935124 10066038 complement(4086346..4086750) 1 NC_014834.1 KEGG: nha:Nham_0654 hypothetical protein; hypothetical protein 4086750 10066038 Rpdx1_3808 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110106.1 4086346 R 652103 CDS YP_004110107.1 316935125 10066039 complement(4087004..4087888) 1 NC_014834.1 KEGG: nha:Nham_0653 hypothetical protein; hypothetical protein 4087888 10066039 Rpdx1_3809 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110107.1 4087004 R 652103 CDS YP_004110108.1 316935126 10066040 complement(4087898..4088572) 1 NC_014834.1 KEGG: bbt:BBta_7109 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; cyclic nucleotide-binding protein 4088572 10066040 Rpdx1_3810 Rhodopseudomonas palustris DX-1 cyclic nucleotide-binding protein YP_004110108.1 4087898 R 652103 CDS YP_004110109.1 316935127 10066041 4088876..4089658 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr7857 putative 3-hydroxybutyryl-CoA dehydratase; enoyl-CoA hydratase/isomerase 4089658 10066041 Rpdx1_3811 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110109.1 4088876 D 652103 CDS YP_004110110.1 316935128 10066042 4089959..4090942 1 NC_014834.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: met:M446_5547 transposase IS116/IS110/IS902 family protein; transposase IS116/IS110/IS902 family protein 4090942 10066042 Rpdx1_3812 Rhodopseudomonas palustris DX-1 transposase IS116/IS110/IS902 family protein YP_004110110.1 4089959 D 652103 CDS YP_004110111.1 316935129 10066043 complement(4090978..4091676) 1 NC_014834.1 PFAM: nitroreductase; KEGG: bbt:BBta_7115 hypothetical protein; nitroreductase 4091676 10066043 Rpdx1_3813 Rhodopseudomonas palustris DX-1 nitroreductase YP_004110111.1 4090978 R 652103 CDS YP_004110112.1 316935130 10066044 complement(4091839..4093083) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO0936 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4093083 10066044 Rpdx1_3814 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004110112.1 4091839 R 652103 CDS YP_004110113.1 316935131 10066045 complement(4093231..4094478) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll7800 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4094478 10066045 Rpdx1_3815 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004110113.1 4093231 R 652103 CDS YP_004110114.1 316935132 10066046 complement(4094615..4095742) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll7801 putative dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4095742 10066046 Rpdx1_3816 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004110114.1 4094615 R 652103 CDS YP_004110115.1 316935133 10066047 complement(4095889..4097763) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_7119 acyl-CoA synthetase; AMP-dependent synthetase and ligase 4097763 10066047 Rpdx1_3817 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110115.1 4095889 R 652103 CDS YP_004110116.1 316935134 10066048 complement(4097814..4098620) 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bra:BRADO0932 putative enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4098620 10066048 Rpdx1_3818 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110116.1 4097814 R 652103 CDS YP_004110117.1 316935135 10066049 complement(4098843..4099601) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll7804 3-hydroxyacyl-CoA dehydrogenase type II; short-chain dehydrogenase/reductase SDR 4099601 10066049 Rpdx1_3819 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110117.1 4098843 R 652103 CDS YP_004110118.1 316935136 10066050 complement(4100063..4100746) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bja:bll7805 transcriptional regulatory protein; regulatory protein TetR 4100746 10066050 Rpdx1_3820 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004110118.1 4100063 R 652103 CDS YP_004110119.1 316935137 10066051 4100871..4102046 1 NC_014834.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: bra:BRADO0929 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 4102046 10066051 Rpdx1_3821 Rhodopseudomonas palustris DX-1 acetyl-CoA acetyltransferase YP_004110119.1 4100871 D 652103 CDS YP_004110120.1 316935138 10066052 4102234..4103790 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr7807 acyl-CoA synthetase; AMP-dependent synthetase and ligase 4103790 10066052 Rpdx1_3822 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110120.1 4102234 D 652103 CDS YP_004110121.1 316935139 10066053 4103901..4104761 1 NC_014834.1 KEGG: bja:bll5248 hypothetical protein; hypothetical protein 4104761 10066053 Rpdx1_3823 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110121.1 4103901 D 652103 CDS YP_004110122.1 316935140 10066054 4105216..4106688 1 NC_014834.1 PFAM: Amidase; KEGG: bra:BRADO0922 amidase; amidase 4106688 10066054 Rpdx1_3824 Rhodopseudomonas palustris DX-1 amidase YP_004110122.1 4105216 D 652103 CDS YP_004110123.1 316935141 10066055 complement(4106821..4108608) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll7899 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4108608 10066055 Rpdx1_3825 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004110123.1 4106821 R 652103 CDS YP_004110124.1 316935142 10066056 4108752..4109495 1 NC_014834.1 PFAM: protein of unknown function DUF81; KEGG: bja:blr6618 hypothetical protein; hypothetical protein 4109495 10066056 Rpdx1_3826 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110124.1 4108752 D 652103 CDS YP_004110125.1 316935143 10066057 complement(4109549..4109755) 1 NC_014834.1 manually curated; KEGG: bra:BRADO0916 hypothetical protein; hypothetical protein 4109755 10066057 Rpdx1_3827 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110125.1 4109549 R 652103 CDS YP_004110126.1 316935144 10066058 4110003..4110494 1 NC_014834.1 PFAM: CinA domain protein; KEGG: bja:blr7909 hypothetical protein; CinA domain-containing protein 4110494 10066058 Rpdx1_3828 Rhodopseudomonas palustris DX-1 CinA domain-containing protein YP_004110126.1 4110003 D 652103 CDS YP_004110127.1 316935145 10066059 complement(4110590..4111186) 1 NC_014834.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: bra:BRADO6273 superoxide dismutase, iron/manganese cofactor; manganese/iron superoxide dismutase-like protein 4111186 10066059 Rpdx1_3829 Rhodopseudomonas palustris DX-1 manganese/iron superoxide dismutase-like protein YP_004110127.1 4110590 R 652103 CDS YP_004110128.1 316935146 10066060 complement(4111387..4112622) 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: cti:RALTA_A1589 putative transporter, major facilitator superfamily MFS_1; major facilitator superfamily protein 4112622 10066060 Rpdx1_3830 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004110128.1 4111387 R 652103 CDS YP_004110129.1 316935147 10066061 4112895..4114268 1 NC_014834.1 KEGG: bja:blr7776 cation efflux system protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 4114268 10066061 Rpdx1_3831 Rhodopseudomonas palustris DX-1 MATE efflux family protein YP_004110129.1 4112895 D 652103 CDS YP_004110130.1 316935148 10066062 4114400..4114843 1 NC_014834.1 PFAM: Protein of unknown function DUF2147; KEGG: nwi:Nwi_0912 hypothetical protein; hypothetical protein 4114843 10066062 Rpdx1_3832 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110130.1 4114400 D 652103 CDS YP_004110131.1 316935149 10066064 complement(4116075..4116209) 1 NC_014834.1 hypothetical protein 4116209 10066064 Rpdx1_3834 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110131.1 4116075 R 652103 CDS YP_004110132.1 316935150 10066067 4117224..4118657 1 NC_014834.1 PFAM: Aldehyde Dehydrogenase; KEGG: bja:blr7884 coniferyl aldehyde dehydrogenase; aldehyde dehydrogenase 4118657 10066067 Rpdx1_3836 Rhodopseudomonas palustris DX-1 aldehyde dehydrogenase YP_004110132.1 4117224 D 652103 CDS YP_004110133.1 316935151 10066068 4118785..4120389 1 NC_014834.1 KEGG: bra:BRADO6420 glucose-methanol-choline oxidoreductase family protein; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; choline dehydrogenase 4120389 10066068 Rpdx1_3837 Rhodopseudomonas palustris DX-1 choline dehydrogenase YP_004110133.1 4118785 D 652103 CDS YP_004110134.1 316935152 10066069 complement(4120712..4121473) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bra:BRADO6422 putative short-chain dehydrogenase/reductase protein; putative 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase); short-chain dehydrogenase/reductase SDR 4121473 10066069 Rpdx1_3838 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110134.1 4120712 R 652103 CDS YP_004110135.1 316935153 10066070 4121582..4122364 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_1210 putative 3-oxoacyl-(acyl-carrier-protein) reductase; short-chain dehydrogenase/reductase SDR 4122364 10066070 Rpdx1_3839 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110135.1 4121582 D 652103 CDS YP_004110136.1 316935154 10066071 complement(4122419..4123045) 1 NC_014834.1 KEGG: bra:BRADO6997 two-component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family two component transcriptional regulator 4123045 10066071 Rpdx1_3840 Rhodopseudomonas palustris DX-1 LuxR family two component transcriptional regulator YP_004110136.1 4122419 R 652103 CDS YP_004110137.1 316935155 10066074 complement(4127571..4128074) 1 NC_014834.1 KEGG: bbt:BBta_0529 putative response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 4128074 10066074 Rpdx1_3843 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004110137.1 4127571 R 652103 CDS YP_004110138.1 316935156 10066075 complement(4128249..4130603) 1 NC_014834.1 KEGG: pna:Pnap_4497 putative phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase-like; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; phosphoketolase 4130603 10066075 Rpdx1_3844 Rhodopseudomonas palustris DX-1 phosphoketolase YP_004110138.1 4128249 R 652103 CDS YP_004110139.1 316935157 10066076 4130996..4131646 1 NC_014834.1 PFAM: transport-associated; KEGG: nha:Nham_1909 transport-associated; transport-associated protein 4131646 10066076 Rpdx1_3845 Rhodopseudomonas palustris DX-1 transport-associated protein YP_004110139.1 4130996 D 652103 CDS YP_004110140.1 316935158 10066077 complement(4131692..4133131) 1 NC_014834.1 KEGG: bbt:BBta_5336 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; UspA domain protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 4133131 10066077 Rpdx1_3846 Rhodopseudomonas palustris DX-1 serine/threonine protein kinase YP_004110140.1 4131692 R 652103 CDS YP_004110141.1 316935159 10066078 complement(4133135..4133875) 1 NC_014834.1 PFAM: metallophosphoesterase; KEGG: bja:bll5683 serine/threonine phosphatase; metallophosphoesterase 4133875 10066078 Rpdx1_3847 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004110141.1 4133135 R 652103 CDS YP_004110142.1 316935160 10066079 4134097..4134525 1 NC_014834.1 KEGG: bja:blr0497 hypothetical protein; hypothetical protein 4134525 10066079 Rpdx1_3848 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110142.1 4134097 D 652103 CDS YP_004110143.1 316935161 10066080 4134683..4136380 1 NC_014834.1 TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; KEGG: bchE; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; SMART: Elongator protein 3/MiaB/NifB; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 4136380 10066080 Rpdx1_3849 Rhodopseudomonas palustris DX-1 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase YP_004110143.1 4134683 D 652103 CDS YP_004110144.1 316935162 10066081 4136352..4137062 1 NC_014834.1 KEGG: bra:BRADO1653 4-vinyl protochlorophyllide reductase; TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR; bacteriochlorophyll 4-vinyl reductase 4137062 10066081 Rpdx1_3850 Rhodopseudomonas palustris DX-1 bacteriochlorophyll 4-vinyl reductase YP_004110144.1 4136352 D 652103 CDS YP_004110145.1 316935163 10066082 4137091..4138440 1 NC_014834.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: jan:Jann_3244 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 4138440 10066082 Rpdx1_3851 Rhodopseudomonas palustris DX-1 oxygen-independent coproporphyrinogen III oxidase YP_004110145.1 4137091 D 652103 CDS YP_004110146.1 316935164 10066083 4138692..4138994 1 NC_014834.1 KEGG: pth:PTH_1299 ATP-dependent Zn proteases; ATP-dependent Zn protease 4138994 10066083 Rpdx1_3852 Rhodopseudomonas palustris DX-1 ATP-dependent Zn protease YP_004110146.1 4138692 D 652103 CDS YP_004110147.1 316935165 10066084 4139129..4139671 1 NC_014834.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bra:BRADO6298 glyoxalase/bleomycin resistance protein; glyoxalase/bleomycin resistance protein/dioxygenase 4139671 10066084 Rpdx1_3853 Rhodopseudomonas palustris DX-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_004110147.1 4139129 D 652103 CDS YP_004110148.1 316935166 10066085 complement(4139668..4140621) 1 NC_014834.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PD00004 putative insertion sequence transposase protein; Integrase catalytic subunit 4140621 10066085 Rpdx1_3854 Rhodopseudomonas palustris DX-1 Integrase catalytic subunit YP_004110148.1 4139668 R 652103 CDS YP_004110149.1 316935167 10066086 4140988..4141650 1 NC_014834.1 KEGG: nha:Nham_0414 hypothetical protein; hypothetical protein 4141650 10066086 Rpdx1_3855 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110149.1 4140988 D 652103 CDS YP_004110150.1 316935168 10066087 complement(4141671..4141946) 1 NC_014834.1 PFAM: protein of unknown function DUF156; KEGG: bbt:BBta_0207 hypothetical protein; hypothetical protein 4141946 10066087 Rpdx1_3856 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110150.1 4141671 R 652103 CDS YP_004110151.1 316935169 10066088 4141998..4144892 1 NC_014834.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bra:BRADO0147 copper-transporting P-type ATPase; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 4144892 10066088 Rpdx1_3857 Rhodopseudomonas palustris DX-1 heavy metal translocating P-type ATPase YP_004110151.1 4141998 D 652103 CDS YP_004110152.1 316935170 10066089 4145035..4145622 1 NC_014834.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: bbt:BBta_4024 hypothetical protein; hemerythrin HHE cation-binding domain-containing protein 4145622 10066089 Rpdx1_3858 Rhodopseudomonas palustris DX-1 hemerythrin HHE cation-binding domain-containing protein YP_004110152.1 4145035 D 652103 CDS YP_004110153.1 316935171 10066090 complement(4145703..4146065) 1 NC_014834.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: azc:AZC_1071 hypothetical protein; hypothetical protein 4146065 10066090 Rpdx1_3859 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110153.1 4145703 R 652103 CDS YP_004110154.1 316935172 10066091 complement(4146285..4146500) 1 NC_014834.1 KEGG: bja:blr5311 histon H1; hypothetical protein 4146500 10066091 Rpdx1_3860 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110154.1 4146285 R 652103 CDS YP_004110155.1 316935173 10066092 4146875..4148089 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nha:Nham_2861 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 4148089 10066092 Rpdx1_3861 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004110155.1 4146875 D 652103 CDS YP_004110156.1 316935174 10066093 complement(4148127..4148822) 1 NC_014834.1 PFAM: high-affinity nickel-transporter; KEGG: sal:Sala_3212 high-affinity nickel-transporter; high-affinity nickel-transporter 4148822 10066093 Rpdx1_3862 Rhodopseudomonas palustris DX-1 high-affinity nickel-transporter YP_004110156.1 4148127 R 652103 CDS YP_004110157.1 316935175 10066094 4148926..4150134 1 NC_014834.1 KEGG: bja:bll2304 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 4150134 10066094 Rpdx1_3863 Rhodopseudomonas palustris DX-1 ABC transporter substrate-binding protein YP_004110157.1 4148926 D 652103 CDS YP_004110158.1 316935176 10066095 4150338..4151351 1 NC_014834.1 PFAM: aldo/keto reductase; KEGG: bbt:BBta_0931 putative oxidoreductase (aldo/keto reductase); aldo/keto reductase 4151351 10066095 Rpdx1_3864 Rhodopseudomonas palustris DX-1 aldo/keto reductase YP_004110158.1 4150338 D 652103 CDS YP_004110159.1 316935177 10066096 4151486..4151884 1 NC_014834.1 KEGG: bra:BRADO3674 hypothetical protein; hypothetical protein 4151884 10066096 Rpdx1_3865 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110159.1 4151486 D 652103 CDS YP_004110160.1 316935178 10066097 4152159..4153376 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr4312 hypothetical protein; extracellular ligand-binding receptor 4153376 10066097 Rpdx1_3866 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004110160.1 4152159 D 652103 CDS YP_004110161.1 316935179 10066098 complement(4153539..4153895) 1 NC_014834.1 PFAM: plasmid stabilization system; KEGG: rce:RC1_0081 plasmid stabilization system protein, RelE; plasmid stabilization system 4153895 10066098 Rpdx1_3867 Rhodopseudomonas palustris DX-1 plasmid stabilization system YP_004110161.1 4153539 R 652103 CDS YP_004110162.1 316935180 10066099 complement(4153901..4154188) 1 NC_014834.1 TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: rce:RC1_0082 transcriptional regulators (CopG/Arc/MetJ DNA-binding domain), putative; addiction module antidote protein 4154188 10066099 Rpdx1_3868 Rhodopseudomonas palustris DX-1 addiction module antidote protein YP_004110162.1 4153901 R 652103 CDS YP_004110163.1 316935181 10066100 complement(4154368..4155057) 1 NC_014834.1 KEGG: xau:Xaut_4228 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4155057 10066100 Rpdx1_3869 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110163.1 4154368 R 652103 CDS YP_004110164.1 316935182 10066101 complement(4155050..4156276) 1 NC_014834.1 PFAM: protein of unknown function DUF214; KEGG: bbt:BBta_1848 putative lipoprotein-releasing system transmembrane protein LolC; hypothetical protein 4156276 10066101 Rpdx1_3870 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110164.1 4155050 R 652103 CDS YP_004110165.1 316935183 10066102 complement(4156273..4157535) 1 NC_014834.1 KEGG: xau:Xaut_4226 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 4157535 10066102 Rpdx1_3871 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004110165.1 4156273 R 652103 CDS YP_004110166.1 316935184 10066103 4157592..4158689 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: mno:Mnod_5961 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein 4158689 10066103 Rpdx1_3872 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004110166.1 4157592 D 652103 CDS YP_004110167.1 316935185 10066104 4158767..4159081 1 NC_014834.1 KEGG: nha:Nham_2805 hypothetical protein; hypothetical protein 4159081 10066104 Rpdx1_3873 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110167.1 4158767 D 652103 CDS YP_004110168.1 316935186 10066105 4159181..4159408 1 NC_014834.1 KEGG: sus:Acid_3191 ribulose-5-phosphate 3-epimerase; hypothetical protein 4159408 10066105 Rpdx1_3874 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110168.1 4159181 D 652103 CDS YP_004110169.1 316935187 10066106 4159398..4160135 1 NC_014834.1 KEGG: abo:ABO_0204 hypothetical protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; transglutaminase domain-containing protein 4160135 10066106 Rpdx1_3875 Rhodopseudomonas palustris DX-1 transglutaminase domain-containing protein YP_004110169.1 4159398 D 652103 CDS YP_004110170.1 316935188 10066107 complement(4160167..4161687) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PFAM: GGDEF domain containing protein; Hemerythrin HHE cation binding domain protein; KEGG: nha:Nham_2322 diguanylate cyclase; SMART: GGDEF domain containing protein; hemerythrin-like metal-binding domain-containing diguanylate cyclase 4161687 10066107 Rpdx1_3876 Rhodopseudomonas palustris DX-1 hemerythrin-like metal-binding domain-containing diguanylate cyclase YP_004110170.1 4160167 R 652103 CDS YP_004110171.1 316935189 10066108 complement(4162047..4163096) 1 NC_014834.1 KEGG: mlo:mll6710 transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4163096 10066108 Rpdx1_3877 Rhodopseudomonas palustris DX-1 AraC family transcriptional regulator YP_004110171.1 4162047 R 652103 CDS YP_004110172.1 316935190 10066110 complement(4163358..4163957) 1 NC_014834.1 manually curated; KEGG: mno:Mnod_8411 hypothetical protein; hypothetical protein 4163957 10066110 Rpdx1_3879 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110172.1 4163358 R 652103 CDS YP_004110173.1 316935191 10066111 complement(4163926..4164105) 1 NC_014834.1 KEGG: rec:RHECIAT_PB0000171 putative excisonase protein; putative excisonase protein 4164105 10066111 Rpdx1_3880 Rhodopseudomonas palustris DX-1 putative excisonase protein YP_004110173.1 4163926 R 652103 CDS YP_004110174.1 316935192 10066113 4164714..4166120 1 NC_014834.1 TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; Hemerythrin HHE cation binding domain protein; KEGG: rsq:Rsph17025_2184 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: GGDEF domain containing protein; hemerythrin-like metal-binding domain-containing/PAS/PAC sensor -containing diguanylate cyclase 4166120 10066113 Rpdx1_3881 Rhodopseudomonas palustris DX-1 hemerythrin-like metal-binding domain-containing/PAS/PAC sensor -containing diguanylate cyclase YP_004110174.1 4164714 D 652103 CDS YP_004110175.1 316935193 10066114 complement(4166154..4167398) 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2214 hypothetical protein; major facilitator superfamily protein 4167398 10066114 Rpdx1_3882 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004110175.1 4166154 R 652103 CDS YP_004110176.1 316935194 10066115 4167664..4169790 1 NC_014834.1 KEGG: bja:bll2207 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; flagellar biosynthesis protein FlhA 4169790 10066115 Rpdx1_3883 Rhodopseudomonas palustris DX-1 flagellar biosynthesis protein FlhA YP_004110176.1 4167664 D 652103 CDS YP_004110177.1 316935195 10066116 4170124..4170324 1 NC_014834.1 KEGG: bbt:BBta_6528 hypothetical protein; hypothetical protein 4170324 10066116 Rpdx1_3884 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110177.1 4170124 D 652103 CDS YP_004110178.1 316935196 10066117 complement(4170647..4171591) 1 NC_014834.1 PFAM: Anti-sigma K factor RskA; KEGG: bbt:BBta_6529 hypothetical protein; anti-sigma K factor Rska 4171591 10066117 Rpdx1_3885 Rhodopseudomonas palustris DX-1 anti-sigma K factor Rska YP_004110178.1 4170647 R 652103 CDS YP_004110179.1 316935197 10066118 complement(4171591..4172139) 1 NC_014834.1 KEGG: bra:BRADO1500 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 4172139 10066118 Rpdx1_3886 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004110179.1 4171591 R 652103 CDS YP_004110180.1 316935198 10066119 complement(4172317..4172745) 1 NC_014834.1 TIGRFAM: flagellar export protein FliJ; KEGG: bbt:BBta_6531 putative flagelar FliJ protein; flagellar export protein FliJ 4172745 10066119 Rpdx1_3887 Rhodopseudomonas palustris DX-1 flagellar export protein FliJ YP_004110180.1 4172317 R 652103 CDS YP_004110181.1 316935199 10066120 complement(4172854..4174179) 1 NC_014834.1 TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: bja:blr2201 flagellum-specific ATP synthase; SMART: AAA ATPase; FliI/YscN family ATPase 4174179 10066120 Rpdx1_3888 Rhodopseudomonas palustris DX-1 FliI/YscN family ATPase YP_004110181.1 4172854 R 652103 CDS YP_004110182.1 316935200 10066121 4174547..4175248 1 NC_014834.1 KEGG: oca:OCAR_7111 cell cycle transcriptional regulator CtrA; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 4175248 10066121 Rpdx1_3889 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004110182.1 4174547 D 652103 CDS YP_004110183.1 316935201 10066122 complement(4175541..4176419) 1 NC_014834.1 PFAM: MCP methyltransferase CheR-type; KEGG: nha:Nham_3372 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type; CheR-type MCP methyltransferase 4176419 10066122 Rpdx1_3890 Rhodopseudomonas palustris DX-1 CheR-type MCP methyltransferase YP_004110183.1 4175541 R 652103 CDS YP_004110184.1 316935202 10066123 complement(4176416..4177591) 1 NC_014834.1 SMART: response regulator receiver; manually curated; KEGG: bbt:BBta_6556 chemotaxis-specific methylesterase; PFAM: CheB methylesterase; response regulator receiver; response regulator receiver modulated CheB methylesterase 4177591 10066123 Rpdx1_3891 Rhodopseudomonas palustris DX-1 response regulator receiver modulated CheB methylesterase YP_004110184.1 4176416 R 652103 CDS YP_004110185.1 316935203 10066124 complement(4177671..4178036) 1 NC_014834.1 KEGG: bbt:BBta_6557 chemotaxis protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 4178036 10066124 Rpdx1_3892 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004110185.1 4177671 R 652103 CDS YP_004110186.1 316935204 10066125 complement(4178104..4178604) 1 NC_014834.1 KEGG: bra:BRADO1474 chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 4178604 10066125 Rpdx1_3893 Rhodopseudomonas palustris DX-1 CheW protein YP_004110186.1 4178104 R 652103 CDS YP_004110187.1 316935205 10066126 complement(4178601..4181417) 1 NC_014834.1 KEGG: bbt:BBta_0524 chemotaxis protein CheA; PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; response regulator receiver; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; response regulator receiver; CheA signal transduction histidine kinase 4181417 10066126 Rpdx1_3894 Rhodopseudomonas palustris DX-1 CheA signal transduction histidine kinase YP_004110187.1 4178601 R 652103 CDS YP_004110188.1 316935206 10066127 complement(4181608..4182264) 1 NC_014834.1 PFAM: Protein of unknown function DUF2328; KEGG: bja:blr2191 hypothetical protein; hypothetical protein 4182264 10066127 Rpdx1_3895 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110188.1 4181608 R 652103 CDS YP_004110189.1 316935207 10066128 4182398..4183225 1 NC_014834.1 PFAM: inositol monophosphatase; KEGG: nwi:Nwi_0518 inositol monophosphatase; inositol monophosphatase 4183225 10066128 Rpdx1_3896 Rhodopseudomonas palustris DX-1 inositol monophosphatase YP_004110189.1 4182398 D 652103 CDS YP_004110190.1 316935208 10066129 complement(4183240..4183716) 1 NC_014834.1 KEGG: nha:Nham_3379 hypothetical protein; hypothetical protein 4183716 10066129 Rpdx1_3897 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110190.1 4183240 R 652103 CDS YP_004110191.1 316935209 10066130 4183859..4184452 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: bja:bll2189 hypothetical protein; hypothetical protein 4184452 10066130 Rpdx1_3898 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110191.1 4183859 D 652103 CDS YP_004110192.1 316935210 10066132 4184693..4185982 1 NC_014834.1 KEGG: bra:BRADO1468 hypothetical protein; hypothetical protein 4185982 10066132 Rpdx1_3900 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110192.1 4184693 D 652103 CDS YP_004110193.1 316935211 10066134 4186327..4186611 1 NC_014834.1 manually curated; KEGG: shl:Shal_1751 hypothetical protein; hypothetical protein 4186611 10066134 Rpdx1_3901 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110193.1 4186327 D 652103 CDS YP_004110194.1 316935212 10066135 4186865..4187185 1 NC_014834.1 KEGG: mtb:TBMG_01424 hypothetical protein; hypothetical protein 4187185 10066135 Rpdx1_3902 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110194.1 4186865 D 652103 CDS YP_004110195.1 316935213 10066136 complement(4187351..4187782) 1 NC_014834.1 KEGG: bja:bll7047 hypothetical protein; hypothetical protein 4187782 10066136 Rpdx1_3903 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110195.1 4187351 R 652103 CDS YP_004110196.1 316935214 10066137 complement(4187889..4189433) 1 NC_014834.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: nha:Nham_3384 hypothetical protein; thiamine pyrophosphate domain-containing TPP-binding protein 4189433 10066137 Rpdx1_3904 Rhodopseudomonas palustris DX-1 thiamine pyrophosphate domain-containing TPP-binding protein YP_004110196.1 4187889 R 652103 CDS YP_004110197.1 316935215 10066138 4189614..4190192 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bbt:BBta_6654 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 4190192 10066138 Rpdx1_3905 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004110197.1 4189614 D 652103 CDS YP_004110198.1 316935216 10066139 4190332..4191087 1 NC_014834.1 KEGG: bja:blr7233 hypothetical protein; hypothetical protein 4191087 10066139 Rpdx1_3906 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110198.1 4190332 D 652103 CDS YP_004110199.1 316935217 10066140 complement(4191133..4191231) 1 NC_014834.1 hypothetical protein 4191231 10066140 Rpdx1_3907 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110199.1 4191133 R 652103 CDS YP_004110200.1 316935218 10066141 complement(4191290..4192105) 1 NC_014834.1 PFAM: Methyltransferase type 11; KEGG: rlg:Rleg_2561 methyltransferase type 11; type 11 methyltransferase 4192105 10066141 Rpdx1_3908 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004110200.1 4191290 R 652103 CDS YP_004110201.1 316935219 10066142 complement(4192202..4193374) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_6658 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4193374 10066142 Rpdx1_3909 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004110201.1 4192202 R 652103 CDS YP_004110202.1 316935220 10066143 4193718..4194983 1 NC_014834.1 PFAM: cytochrome P450; KEGG: bja:blr7243 putative cytochrome P450; cytochrome P450 4194983 10066143 Rpdx1_3910 Rhodopseudomonas palustris DX-1 cytochrome P450 YP_004110202.1 4193718 D 652103 CDS YP_004110203.1 316935221 10066144 4195017..4196189 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bra:BRADO1442 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4196189 10066144 Rpdx1_3911 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004110203.1 4195017 D 652103 CDS YP_004110204.1 316935222 10066145 4196391..4197485 1 NC_014834.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bra:BRADO1441 formyl-coenzyme A transferase NAD(P)-binding; L-carnitine dehydratase/bile acid-inducible protein F 4197485 10066145 Rpdx1_3912 Rhodopseudomonas palustris DX-1 L-carnitine dehydratase/bile acid-inducible protein F YP_004110204.1 4196391 D 652103 CDS YP_004110205.1 316935223 10066146 4197499..4198356 1 NC_014834.1 KEGG: bra:BRADO1440 hypothetical protein; hypothetical protein 4198356 10066146 Rpdx1_3913 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110205.1 4197499 D 652103 CDS YP_004110206.1 316935224 10066147 4198613..4200244 1 NC_014834.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; KEGG: bja:blr7248 benzoylformate decarboxylase; thiamine pyrophosphate domain-containing TPP-binding protein 4200244 10066147 Rpdx1_3914 Rhodopseudomonas palustris DX-1 thiamine pyrophosphate domain-containing TPP-binding protein YP_004110206.1 4198613 D 652103 CDS YP_004110207.1 316935225 10066148 complement(4200255..4201535) 1 NC_014834.1 PFAM: beta-lactamase; KEGG: bja:bll5709 hypothetical protein; beta-lactamase 4201535 10066148 Rpdx1_3915 Rhodopseudomonas palustris DX-1 beta-lactamase YP_004110207.1 4200255 R 652103 CDS YP_004110208.1 316935226 10066149 complement(4201595..4202137) 1 NC_014834.1 manually curated; PFAM: Appr-1-p processing domain protein; KEGG: bbt:BBta_5392 hypothetical protein; SMART: Appr-1-p processing domain protein; Appr-1-p processing protein 4202137 10066149 Rpdx1_3916 Rhodopseudomonas palustris DX-1 Appr-1-p processing protein YP_004110208.1 4201595 R 652103 CDS YP_004110209.1 316935227 10066150 complement(4202134..4202517) 1 NC_014834.1 manually curated; TIGRFAM: glutaredoxin-like protein; KEGG: bbt:BBta_5393 putative glutaredoxin family protein; PFAM: glutaredoxin; glutaredoxin-like protein 4202517 10066150 Rpdx1_3917 Rhodopseudomonas palustris DX-1 glutaredoxin-like protein YP_004110209.1 4202134 R 652103 CDS YP_004110210.1 316935228 10066151 4202608..4204002 1 NC_014834.1 PFAM: protein of unknown function DUF323; KEGG: bbt:BBta_5394 hypothetical protein; hypothetical protein 4204002 10066151 Rpdx1_3918 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110210.1 4202608 D 652103 CDS YP_004110211.1 316935229 10066152 4204047..4205015 1 NC_014834.1 KEGG: nha:Nham_1639 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260; methyltransferase 4205015 10066152 Rpdx1_3919 Rhodopseudomonas palustris DX-1 methyltransferase YP_004110211.1 4204047 D 652103 CDS YP_004110212.1 316935230 10066153 complement(4205039..4205767) 1 NC_014834.1 KEGG: mno:Mnod_6017 hypothetical protein; hypothetical protein 4205767 10066153 Rpdx1_3920 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110212.1 4205039 R 652103 CDS YP_004110213.1 316935231 10066154 complement(4205903..4206136) 1 NC_014834.1 PFAM: BolA family protein; KEGG: bja:bsl5715 hypothetical protein; BolA family protein 4206136 10066154 Rpdx1_3921 Rhodopseudomonas palustris DX-1 BolA family protein YP_004110213.1 4205903 R 652103 CDS YP_004110214.1 316935232 10066155 4206302..4206664 1 NC_014834.1 KEGG: bbt:BBta_5398 hypothetical protein; manually curated; PFAM: protein of unknown function DUF427; hypothetical protein 4206664 10066155 Rpdx1_3922 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110214.1 4206302 D 652103 CDS YP_004110215.1 316935233 10066156 4206769..4207920 1 NC_014834.1 PFAM: acyltransferase 3; KEGG: bbt:BBta_5400 hypothetical protein; acyltransferase 3 4207920 10066156 Rpdx1_3923 Rhodopseudomonas palustris DX-1 acyltransferase 3 YP_004110215.1 4206769 D 652103 CDS YP_004110216.1 316935234 10066157 complement(4208105..4210315) 1 NC_014834.1 TIGRFAM: phosphoribosylformylglycinamidine synthase II; KEGG: nha:Nham_1636 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine synthase II 4210315 10066157 Rpdx1_3924 Rhodopseudomonas palustris DX-1 phosphoribosylformylglycinamidine synthase II YP_004110216.1 4208105 R 652103 CDS YP_004110217.1 316935235 10066159 complement(4210602..4211966) 1 NC_014834.1 KEGG: rfr:Rfer_1328 tryptophan synthase subunit beta; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-phosphate dependent TrpB-like protein 4211966 10066159 Rpdx1_3926 Rhodopseudomonas palustris DX-1 pyridoxal-phosphate dependent TrpB-like protein YP_004110217.1 4210602 R 652103 CDS YP_004110218.1 316935236 10066161 4212694..4213488 1 NC_014834.1 TIGRFAM: glutamate racemase; KEGG: bbt:BBta_5384 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 4213488 10066161 Rpdx1_3928 Rhodopseudomonas palustris DX-1 glutamate racemase YP_004110218.1 4212694 D 652103 CDS YP_004110219.1 316935237 10066162 4213547..4213936 1 NC_014834.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bja:blr5704 hypothetical protein; cupin 4213936 10066162 Rpdx1_3929 Rhodopseudomonas palustris DX-1 cupin YP_004110219.1 4213547 D 652103 CDS YP_004110220.1 316935238 10066163 4213937..4214713 1 NC_014834.1 KEGG: bja:blr5705 hypothetical protein; hypothetical protein 4214713 10066163 Rpdx1_3930 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110220.1 4213937 D 652103 CDS YP_004110221.1 316935239 10066164 4214765..4215019 1 NC_014834.1 KEGG: cyc:PCC7424_5686 hypothetical protein; hypothetical protein 4215019 10066164 Rpdx1_3931 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110221.1 4214765 D 652103 CDS YP_004110222.1 316935240 10066165 4215003..4215545 1 NC_014834.1 KEGG: ypz:YPZ3_pMT0050 hypothetical protein; hypothetical protein 4215545 10066165 Rpdx1_3932 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110222.1 4215003 D 652103 CDS YP_004110223.1 316935241 10066166 4215752..4216369 1 NC_014834.1 TIGRFAM: ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; KEGG: nha:Nham_1644 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 4216369 10066166 Rpdx1_3933 Rhodopseudomonas palustris DX-1 30S ribosomal protein S4 YP_004110223.1 4215752 D 652103 CDS YP_004110224.1 316935242 10066167 4216691..4217773 1 NC_014834.1 KEGG: bbt:BBta_5390 putative L-allo-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase 4217773 10066167 Rpdx1_3934 Rhodopseudomonas palustris DX-1 threonine aldolase YP_004110224.1 4216691 D 652103 CDS YP_004110225.1 316935243 10066168 complement(4217807..4218607) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll7251 putative dehydrogenase; short-chain dehydrogenase/reductase SDR 4218607 10066168 Rpdx1_3935 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110225.1 4217807 R 652103 CDS YP_004110226.1 316935244 10066169 complement(4218667..4219362) 1 NC_014834.1 PFAM: Hly-III family protein; KEGG: oca:OCAR_5063 hemolysin-3 (hemolysin III) (Hly-III); Hly-III family protein 4219362 10066169 Rpdx1_3936 Rhodopseudomonas palustris DX-1 Hly-III family protein YP_004110226.1 4218667 R 652103 CDS YP_004110227.1 316935245 10066170 4219603..4221072 1 NC_014834.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: nwi:Nwi_3019 YcjX-like protein; hypothetical protein 4221072 10066170 Rpdx1_3937 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110227.1 4219603 D 652103 CDS YP_004110228.1 316935246 10066171 4221069..4222163 1 NC_014834.1 PFAM: Uncharacterised protein family UPF0283; KEGG: bra:BRADO1432 hypothetical protein; hypothetical protein 4222163 10066171 Rpdx1_3938 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110228.1 4221069 D 652103 CDS YP_004110229.1 316935247 10066172 4222380..4224152 1 NC_014834.1 manually curated; PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bra:BRADO1430 ferredoxin:adenylate/guanylate cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; adenylate/guanylate cyclase 4224152 10066172 Rpdx1_3939 Rhodopseudomonas palustris DX-1 adenylate/guanylate cyclase YP_004110229.1 4222380 D 652103 CDS YP_004110230.1 316935248 10066173 4224352..4224597 1 NC_014834.1 KEGG: nha:Nham_3393 hypothetical protein; hypothetical protein 4224597 10066173 Rpdx1_3940 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110230.1 4224352 D 652103 CDS YP_004110231.1 316935249 10066174 complement(4224705..4225352) 1 NC_014834.1 KEGG: nha:Nham_3397 hypothetical protein; hypothetical protein 4225352 10066174 Rpdx1_3941 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110231.1 4224705 R 652103 CDS YP_004110232.1 316935250 10066175 4225496..4228504 1 NC_014834.1 KEGG: nwi:Nwi_3055 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 4228504 10066175 Rpdx1_3942 Rhodopseudomonas palustris DX-1 delta-1-pyrroline-5-carboxylate dehydrogenase YP_004110232.1 4225496 D 652103 CDS YP_004110233.1 316935251 10066176 4228671..4229879 1 NC_014834.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bbt:BBta_6680 acyl-coenzyme A transferase; L-carnitine dehydratase/bile acid-inducible protein F 4229879 10066176 Rpdx1_3943 Rhodopseudomonas palustris DX-1 L-carnitine dehydratase/bile acid-inducible protein F YP_004110233.1 4228671 D 652103 CDS YP_004110234.1 316935252 10066177 4230187..4230960 1 NC_014834.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bja:blr3195 ferredoxin NADP+ reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 4230960 10066177 Rpdx1_3944 Rhodopseudomonas palustris DX-1 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_004110234.1 4230187 D 652103 CDS YP_004110235.1 316935253 10066178 complement(4231150..4232118) 1 NC_014834.1 KEGG: bja:bll7264 hypothetical protein; hypothetical protein 4232118 10066178 Rpdx1_3945 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110235.1 4231150 R 652103 CDS YP_004110236.1 316935254 10066179 4232327..4232938 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: pla:Plav_3102 glutathione S-transferase domain-containing protein; glutathione S-transferase domain-containing protein 4232938 10066179 Rpdx1_3946 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004110236.1 4232327 D 652103 CDS YP_004110237.1 316935255 10066180 complement(4232972..4233862) 1 NC_014834.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aav:Aave_3336 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4233862 10066180 Rpdx1_3947 Rhodopseudomonas palustris DX-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004110237.1 4232972 R 652103 CDS YP_004110238.1 316935256 10066181 complement(4233873..4234313) 1 NC_014834.1 PFAM: protein of unknown function UPF0074; KEGG: rcu:RCOM_1954690 hypothetical protein; BadM/Rrf2 family transcriptional regulator 4234313 10066181 Rpdx1_3948 Rhodopseudomonas palustris DX-1 BadM/Rrf2 family transcriptional regulator YP_004110238.1 4233873 R 652103 CDS YP_004110239.1 316935257 10066182 complement(4234412..4234909) 1 NC_014834.1 PFAM: protein of unknown function DUF477; KEGG: bja:bll7265 hypothetical protein; hypothetical protein 4234909 10066182 Rpdx1_3949 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110239.1 4234412 R 652103 CDS YP_004110240.1 316935258 10066183 complement(4234922..4235824) 1 NC_014834.1 PFAM: protein of unknown function DUF477; KEGG: bbt:BBta_6688 hypothetical protein; hypothetical protein 4235824 10066183 Rpdx1_3950 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110240.1 4234922 R 652103 CDS YP_004110241.1 316935259 10066184 complement(4235841..4236455) 1 NC_014834.1 PFAM: LemA family protein; KEGG: bja:bll7267 lipoprotein; LemA family protein 4236455 10066184 Rpdx1_3951 Rhodopseudomonas palustris DX-1 LemA family protein YP_004110241.1 4235841 R 652103 CDS YP_004110242.1 316935260 10066185 complement(4236533..4238863) 1 NC_014834.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bja:bll7271 carbon monoxide dehydrogenase large chain; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 4238863 10066185 Rpdx1_3952 Rhodopseudomonas palustris DX-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_004110242.1 4236533 R 652103 CDS YP_004110243.1 316935261 10066187 complement(4239117..4239992) 1 NC_014834.1 PFAM: dihydrodipicolinate synthetase; KEGG: bja:bll7272 putative dihydrodipicolinate synthase; dihydrodipicolinate synthetase 4239992 10066187 Rpdx1_3954 Rhodopseudomonas palustris DX-1 dihydrodipicolinate synthetase YP_004110243.1 4239117 R 652103 CDS YP_004110244.1 316935262 10066188 4240125..4242242 1 NC_014834.1 KEGG: bbt:BBta_0542 peptidase S9A family; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; oligopeptidase B 4242242 10066188 Rpdx1_3955 Rhodopseudomonas palustris DX-1 oligopeptidase B YP_004110244.1 4240125 D 652103 CDS YP_004110245.1 316935263 10066189 4242404..4243699 1 NC_014834.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: bja:bll1235 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 4243699 10066189 Rpdx1_3956 Rhodopseudomonas palustris DX-1 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_004110245.1 4242404 D 652103 CDS YP_004110246.1 316935264 10066190 4243703..4244485 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:bll1234 putative hydolase; alpha/beta hydrolase fold protein 4244485 10066190 Rpdx1_3957 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004110246.1 4243703 D 652103 CDS YP_004110247.1 316935265 10066191 complement(4244824..4245747) 1 NC_014834.1 TIGRFAM: CbbX protein; PFAM: AAA ATPase central domain protein; KEGG: bra:BRADO1661 CbbX-like protein; SMART: AAA ATPase; CbbX protein 4245747 10066191 Rpdx1_3958 Rhodopseudomonas palustris DX-1 CbbX protein YP_004110247.1 4244824 R 652103 CDS YP_004110248.1 316935266 10066192 complement(4245750..4246172) 1 NC_014834.1 KEGG: bbt:BBta_6396 ribulose 1,5-bisphosphate carboxylase small subunit; PFAM: ribulose bisphosphate carboxylase small chain; ribulose-bisphosphate carboxylase 4246172 10066192 Rpdx1_3959 Rhodopseudomonas palustris DX-1 ribulose-bisphosphate carboxylase YP_004110248.1 4245750 R 652103 CDS YP_004110249.1 316935267 10066193 complement(4246185..4247642) 1 NC_014834.1 KEGG: bbt:BBta_6397 ribulose bisophosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; ribulose-bisphosphate carboxylase 4247642 10066193 Rpdx1_3960 Rhodopseudomonas palustris DX-1 ribulose-bisphosphate carboxylase YP_004110249.1 4246185 R 652103 CDS YP_004110250.1 316935268 10066194 complement(4247842..4251315) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; CHASE domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: xal:XALc_1974 putative two-component system sensor-response regulator hybrid protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; multi-sensor hybrid histidine kinase 4251315 10066194 Rpdx1_3961 Rhodopseudomonas palustris DX-1 multi-sensor hybrid histidine kinase YP_004110250.1 4247842 R 652103 CDS YP_004110251.1 316935269 10066195 complement(4251321..4252157) 1 NC_014834.1 KEGG: gem:GM21_1722 histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 4252157 10066195 Rpdx1_3962 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004110251.1 4251321 R 652103 CDS YP_004110252.1 316935270 10066196 complement(4252180..4252869) 1 NC_014834.1 KEGG: mlo:mlr6690 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 4252869 10066196 Rpdx1_3963 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004110252.1 4252180 R 652103 CDS YP_004110253.1 316935271 10066197 complement(4252866..4253006) 1 NC_014834.1 hypothetical protein 4253006 10066197 Rpdx1_3964 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110253.1 4252866 R 652103 CDS YP_004110254.1 316935272 10066198 4253576..4254544 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nha:Nham_3755 LysR family transcriptional regulator; LysR family transcriptional regulator 4254544 10066198 Rpdx1_3965 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004110254.1 4253576 D 652103 CDS YP_004110255.1 316935273 10066199 complement(4254717..4255928) 1 NC_014834.1 TIGRFAM: 5-aminolevulinic acid synthase; KEGG: bra:BRADO1651 5-aminolevulinate synthase; PFAM: aminotransferase class I and II; 5-aminolevulinate synthase 4255928 10066199 Rpdx1_3966 Rhodopseudomonas palustris DX-1 5-aminolevulinate synthase YP_004110255.1 4254717 R 652103 CDS YP_004110256.1 316935274 10066200 complement(4255925..4256983) 1 NC_014834.1 TIGRFAM: photosynthetic complex assembly protein 2; KEGG: bbt:BBta_6406 hypothetical protein; photosynthetic complex assembly protein 2 4256983 10066200 Rpdx1_3967 Rhodopseudomonas palustris DX-1 photosynthetic complex assembly protein 2 YP_004110256.1 4255925 R 652103 CDS YP_004110257.1 316935275 10066201 complement(4256997..4258094) 1 NC_014834.1 TIGRFAM: magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase; KEGG: bra:BRADO1649 magnesium-protoporphyrin IX monomethyl ester cyclase; PFAM: Rubrerythrin; magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase 4258094 10066201 Rpdx1_3968 Rhodopseudomonas palustris DX-1 magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase YP_004110257.1 4256997 R 652103 CDS YP_004110258.1 316935276 10066202 complement(4258091..4258390) 1 NC_014834.1 KEGG: mdi:METDI5864 hypothetical protein; hypothetical protein 4258390 10066202 Rpdx1_3969 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110258.1 4258091 R 652103 CDS YP_004110259.1 316935277 10066203 complement(4258393..4258899) 1 NC_014834.1 TIGRFAM: photosynthetic complex assembly protein; KEGG: bbt:BBta_6409 hypothetical protein; photosynthetic complex assembly protein 4258899 10066203 Rpdx1_3970 Rhodopseudomonas palustris DX-1 photosynthetic complex assembly protein YP_004110259.1 4258393 R 652103 CDS YP_004110260.1 316935278 10066204 complement(4258913..4259575) 1 NC_014834.1 KEGG: mex:Mext_4809 putative photosynthetic complex assembly protein; putative photosynthetic complex assembly protein 4259575 10066204 Rpdx1_3971 Rhodopseudomonas palustris DX-1 putative photosynthetic complex assembly protein YP_004110260.1 4258913 R 652103 CDS YP_004110261.1 316935279 10066205 complement(4259572..4260339) 1 NC_014834.1 KEGG: bbt:BBta_6411 reaction center protein H chain (photosynthetic reaction center H subunit); TIGRFAM: photosynthetic reaction center H subunit; PFAM: Photosynthetic reaction centre H subunit ; PRC-barrel domain protein; photosynthetic reaction center subunit H 4260339 10066205 Rpdx1_3972 Rhodopseudomonas palustris DX-1 photosynthetic reaction center subunit H YP_004110261.1 4259572 R 652103 CDS YP_004110262.1 316935280 10066206 complement(4260362..4261795) 1 NC_014834.1 PFAM: PUCC protein; KEGG: bra:BRADO1644 photosynthetic complex (LH1) assembly protein LhaA; PUCC protein 4261795 10066206 Rpdx1_3973 Rhodopseudomonas palustris DX-1 PUCC protein YP_004110262.1 4260362 R 652103 CDS YP_004110263.1 316935281 10066207 complement(4261792..4262493) 1 NC_014834.1 TIGRFAM: magnesium protoporphyrin O-methyltransferase; KEGG: alv:Alvin_2638 magnesium protoporphyrin O-methyltransferase; PFAM: Magnesium-protoporphyrin IX methyltransferase domain protein; magnesium protoporphyrin O-methyltransferase 4262493 10066207 Rpdx1_3974 Rhodopseudomonas palustris DX-1 magnesium protoporphyrin O-methyltransferase YP_004110263.1 4261792 R 652103 CDS YP_004110264.1 316935282 10066208 complement(4262493..4263431) 1 NC_014834.1 TIGRFAM: light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; KEGG: bbt:BBta_6414 protochlorophyllide reductase iron-sulfur ATP-binding protein; PFAM: NifH/frxC-family protein; light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein 4263431 10066208 Rpdx1_3975 Rhodopseudomonas palustris DX-1 light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein YP_004110264.1 4262493 R 652103 CDS YP_004110265.1 316935283 10066209 complement(4263428..4267174) 1 NC_014834.1 TIGRFAM: magnesium chelatase, H subunit; KEGG: rce:RC1_2113 magnesium chelatase subunit H; PFAM: CobN/magnesium chelatase; magnesium chelatase subunit H 4267174 10066209 Rpdx1_3976 Rhodopseudomonas palustris DX-1 magnesium chelatase subunit H YP_004110265.1 4263428 R 652103 CDS YP_004110266.1 316935284 10066210 complement(4267149..4268771) 1 NC_014834.1 KEGG: rce:RC1_2114 light-independent protochlorophyllide reductase subunit B; TIGRFAM: light-independent protochlorophyllide reductase, B subunit; PFAM: oxidoreductase/nitrogenase component 1; Proto-chlorophyllide reductase 57 kD subunit; light-independent protochlorophyllide reductase subunit B 4268771 10066210 Rpdx1_3977 Rhodopseudomonas palustris DX-1 light-independent protochlorophyllide reductase subunit B YP_004110266.1 4267149 R 652103 CDS YP_004110267.1 316935285 10066211 complement(4268775..4270064) 1 NC_014834.1 KEGG: bbt:BBta_6417 light-independent protochlorophyllide reductase subunit N; TIGRFAM: light-independent protochlorophyllide reductase, N subunit; PFAM: oxidoreductase/nitrogenase component 1; light-independent protochlorophyllide reductase, N subunit 4270064 10066211 Rpdx1_3978 Rhodopseudomonas palustris DX-1 light-independent protochlorophyllide reductase, N subunit YP_004110267.1 4268775 R 652103 CDS YP_004110268.1 316935286 10066212 complement(4270061..4270687) 1 NC_014834.1 KEGG: bra:BRADO1638 2-vinyl bacteriochlorophyllide hydratase; TIGRFAM: 2-vinyl bacteriochlorophyllide hydratase; PFAM: 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD 4270687 10066212 Rpdx1_3979 Rhodopseudomonas palustris DX-1 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD YP_004110268.1 4270061 R 652103 CDS YP_004110269.1 316935287 10066213 4270875..4271756 1 NC_014834.1 KEGG: rce:RC1_2117 coenzyme B12-binding aerobic repressor; hypothetical protein 4271756 10066213 Rpdx1_3980 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110269.1 4270875 D 652103 CDS YP_004110270.1 316935288 10066214 4271818..4272492 1 NC_014834.1 KEGG: bra:BRADO1626 heme oxygenase; PFAM: Haem oxygenase-like; heme oxygenase 4272492 10066214 Rpdx1_3981 Rhodopseudomonas palustris DX-1 heme oxygenase YP_004110270.1 4271818 D 652103 CDS YP_004110271.1 316935289 10066215 complement(4272523..4274718) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-2 domain protein; GAF domain protein; Phytochrome central region domain protein; PAS fold domain protein; KEGG: bbt:BBta_6428 bacteriophytochrome; SMART: GAF domain protein; putative PAS/PAC sensor protein 4274718 10066215 Rpdx1_3982 Rhodopseudomonas palustris DX-1 putative PAS/PAC sensor protein YP_004110271.1 4272523 R 652103 CDS YP_004110272.1 316935290 10066216 complement(4274719..4276116) 1 NC_014834.1 TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold-4 domain protein; KEGG: bra:BRADO1629 transcriptional regulator PpsR2; SMART: PAS domain containing protein; transcriptional regulator PpsR 4276116 10066216 Rpdx1_3983 Rhodopseudomonas palustris DX-1 transcriptional regulator PpsR YP_004110272.1 4274719 R 652103 CDS YP_004110273.1 316935291 10066217 4276439..4276858 1 NC_014834.1 PFAM: cytochrome c class I; KEGG: bra:BRADO1630 cytochrome c2; cytochrome c class I 4276858 10066217 Rpdx1_3984 Rhodopseudomonas palustris DX-1 cytochrome c class I YP_004110273.1 4276439 D 652103 CDS YP_004110274.1 316935292 10066218 complement(4277044..4277316) 1 NC_014834.1 KEGG: bbt:BBta_6425 hypothetical protein; hypothetical protein 4277316 10066218 Rpdx1_3985 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110274.1 4277044 R 652103 CDS YP_004110275.1 316935293 10066219 complement(4277350..4277814) 1 NC_014834.1 PFAM: TspO/MBR family protein; KEGG: mpt:Mpe_A2778 tryptophan-rich sensory protein; TspO and MBR-like protein 4277814 10066219 Rpdx1_3986 Rhodopseudomonas palustris DX-1 TspO and MBR-like protein YP_004110275.1 4277350 R 652103 CDS YP_004110276.1 316935294 10066220 complement(4277835..4279040) 1 NC_014834.1 KEGG: bra:BRADO1632 geranylgeranyl reductase; TIGRFAM: geranylgeranyl reductase; PFAM: FAD dependent oxidoreductase; geranylgeranyl reductase 4279040 10066220 Rpdx1_3987 Rhodopseudomonas palustris DX-1 geranylgeranyl reductase YP_004110276.1 4277835 R 652103 CDS YP_004110277.1 316935295 10066221 complement(4279042..4280367) 1 NC_014834.1 PFAM: PUCC protein; KEGG: bbt:BBta_6423 light harvesting pigment major facilitator family (MFS) transporter, Bch2-like protein; PUCC protein 4280367 10066221 Rpdx1_3988 Rhodopseudomonas palustris DX-1 PUCC protein YP_004110277.1 4279042 R 652103 CDS YP_004110278.1 316935296 10066222 complement(4280370..4281263) 1 NC_014834.1 KEGG: alv:Alvin_2645 bacteriochlorophyll/chlorophyll synthetase; TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; bacteriochlorophyll/chlorophyll synthetase 4281263 10066222 Rpdx1_3989 Rhodopseudomonas palustris DX-1 bacteriochlorophyll/chlorophyll synthetase YP_004110278.1 4280370 R 652103 CDS YP_004110279.1 316935297 10066223 complement(4281256..4282689) 1 NC_014834.1 TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold domain protein; PAS fold-4 domain protein; KEGG: rce:RC1_2118 transcriptional regulator CrtJ (homologous to PpsR); SMART: PAS domain containing protein; transcriptional regulator PpsR 4282689 10066223 Rpdx1_3990 Rhodopseudomonas palustris DX-1 transcriptional regulator PpsR YP_004110279.1 4281256 R 652103 CDS YP_004110280.1 316935298 10066224 complement(4282978..4283901) 1 NC_014834.1 KEGG: bra:BRADO1625 photosynthetic reaction center M protein; TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; photosynthetic reaction center, M subunit 4283901 10066224 Rpdx1_3991 Rhodopseudomonas palustris DX-1 photosynthetic reaction center, M subunit YP_004110280.1 4282978 R 652103 CDS YP_004110281.1 316935299 10066225 complement(4283929..4284762) 1 NC_014834.1 KEGG: bbt:BBta_6431 photosynthetic reaction center subunit L; TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; photosynthetic reaction center L subunit 4284762 10066225 Rpdx1_3992 Rhodopseudomonas palustris DX-1 photosynthetic reaction center L subunit YP_004110281.1 4283929 R 652103 CDS YP_004110282.1 316935300 10066226 complement(4284895..4285086) 1 NC_014834.1 PFAM: antenna complex alpha/beta subunit; KEGG: bra:BRADO1623 light harvesting 1 alpha subunit; antenna complex subunit alpha/beta 4285086 10066226 Rpdx1_3993 Rhodopseudomonas palustris DX-1 antenna complex subunit alpha/beta YP_004110282.1 4284895 R 652103 CDS YP_004110283.1 316935301 10066227 complement(4285102..4285299) 1 NC_014834.1 PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_6433 light harvesting 1 beta subunit; antenna complex subunit alpha/beta 4285299 10066227 Rpdx1_3994 Rhodopseudomonas palustris DX-1 antenna complex subunit alpha/beta YP_004110283.1 4285102 R 652103 CDS YP_004110284.1 316935302 10066228 complement(4285454..4285678) 1 NC_014834.1 KEGG: met:M446_3700 hypothetical protein; hypothetical protein 4285678 10066228 Rpdx1_3995 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110284.1 4285454 R 652103 CDS YP_004110285.1 316935303 10066229 complement(4285756..4287204) 1 NC_014834.1 KEGG: bra:BRADO1620 bacteriochlorophyllide reductase Z subunit; TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; chlorophyllide reductase subunit Z 4287204 10066229 Rpdx1_3996 Rhodopseudomonas palustris DX-1 chlorophyllide reductase subunit Z YP_004110285.1 4285756 R 652103 CDS YP_004110286.1 316935304 10066230 complement(4287204..4288793) 1 NC_014834.1 TIGRFAM: chlorophyllide reductase subunit Y; KEGG: bbt:BBta_6436 bacteriochlorophyllide reductase subunit; chlorophyllide reductase subunit Y 4288793 10066230 Rpdx1_3997 Rhodopseudomonas palustris DX-1 chlorophyllide reductase subunit Y YP_004110286.1 4287204 R 652103 CDS YP_004110287.1 316935305 10066231 complement(4288817..4289815) 1 NC_014834.1 TIGRFAM: chlorophyllide reductase iron protein subunit X; KEGG: mrd:Mrad2831_2818 chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X 4289815 10066231 Rpdx1_3998 Rhodopseudomonas palustris DX-1 chlorophyllide reductase iron protein subunit X YP_004110287.1 4288817 R 652103 CDS YP_004110288.1 316935306 10066232 complement(4289815..4290753) 1 NC_014834.1 KEGG: rce:RC1_2093 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase, putative; TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; chlorophyll synthesis pathway protein BchC 4290753 10066232 Rpdx1_3999 Rhodopseudomonas palustris DX-1 chlorophyll synthesis pathway protein BchC YP_004110288.1 4289815 R 652103 CDS YP_004110289.1 316935307 10066233 complement(4290842..4291963) 1 NC_014834.1 PFAM: O-methyltransferase family 2; KEGG: rce:RC1_2092 hydroxyneurosporene methyltransferase; O-methyltransferase family 2 4291963 10066233 Rpdx1_4000 Rhodopseudomonas palustris DX-1 O-methyltransferase family 2 YP_004110289.1 4290842 R 652103 CDS YP_004110290.1 316935308 10066234 complement(4292013..4292879) 1 NC_014834.1 PFAM: Polyprenyl synthetase; KEGG: bra:BRADO1615 geranylgeranyl pyrophosphate synthetase (GgpP synthetase) (farnesyltranstransferase); polyprenyl synthetase 4292879 10066234 Rpdx1_4001 Rhodopseudomonas palustris DX-1 polyprenyl synthetase YP_004110290.1 4292013 R 652103 CDS YP_004110291.1 316935309 10066235 4292999..4294558 1 NC_014834.1 KEGG: bra:BRADO1614 hydroxyneurosporene and rhodopin dehydrogenase; TIGRFAM: phytoene desaturase; PFAM: FAD dependent oxidoreductase; phytoene desaturase 4294558 10066235 Rpdx1_4002 Rhodopseudomonas palustris DX-1 phytoene desaturase YP_004110291.1 4292999 D 652103 CDS YP_004110292.1 316935310 10066236 4294563..4295516 1 NC_014834.1 PFAM: hydroxyneurosporene synthase; KEGG: bbt:BBta_6442 hydroxyneurosporene synthase; hydroxyneurosporene synthase 4295516 10066236 Rpdx1_4003 Rhodopseudomonas palustris DX-1 hydroxyneurosporene synthase YP_004110292.1 4294563 D 652103 CDS YP_004110293.1 316935311 10066237 4295644..4295928 1 NC_014834.1 KEGG: nwi:Nwi_1053 excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; excinuclease ABC subunit C domain-containing protein 4295928 10066237 Rpdx1_4004 Rhodopseudomonas palustris DX-1 excinuclease ABC subunit C domain-containing protein YP_004110293.1 4295644 D 652103 CDS YP_004110294.1 316935312 10066238 complement(4295972..4296124) 1 NC_014834.1 KEGG: bbt:BBta_6443 hypothetical protein; hypothetical protein 4296124 10066238 Rpdx1_4005 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110294.1 4295972 R 652103 CDS YP_004110295.1 316935313 10066239 complement(4296121..4296255) 1 NC_014834.1 KEGG: bbt:BBta_6443 hypothetical protein; hypothetical protein 4296255 10066239 Rpdx1_4006 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110295.1 4296121 R 652103 CDS YP_004110296.1 316935314 10066240 complement(4296320..4297234) 1 NC_014834.1 KEGG: pzu:PHZ_c2874 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase; coproporphyrinogen oxidase 4297234 10066240 Rpdx1_4007 Rhodopseudomonas palustris DX-1 coproporphyrinogen oxidase YP_004110296.1 4296320 R 652103 CDS YP_004110297.1 316935315 10066241 complement(4297570..4298637) 1 NC_014834.1 KEGG: rce:RC1_2086 phytoene synthase; PFAM: Squalene/phytoene synthase; phytoene synthase 4298637 10066241 Rpdx1_4008 Rhodopseudomonas palustris DX-1 phytoene synthase YP_004110297.1 4297570 R 652103 CDS YP_004110298.1 316935316 10066242 complement(4298634..4300169) 1 NC_014834.1 KEGG: bra:BRADO1610 phytoene dehydrogenase (phytoene desaturase); TIGRFAM: phytoene desaturase; PFAM: amine oxidase; phytoene desaturase 4300169 10066242 Rpdx1_4009 Rhodopseudomonas palustris DX-1 phytoene desaturase YP_004110298.1 4298634 R 652103 CDS YP_004110299.1 316935317 10066243 complement(4300245..4301132) 1 NC_014834.1 KEGG: bra:BRADO1609 putative alpha/beta hydrolase, putative protoporphyrin IX magnesium chelatase BchO-like; TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; magnesium chelatase accessory protein 4301132 10066243 Rpdx1_4010 Rhodopseudomonas palustris DX-1 magnesium chelatase accessory protein YP_004110299.1 4300245 R 652103 CDS YP_004110300.1 316935318 10066244 complement(4301291..4302253) 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO1608 putative alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4302253 10066244 Rpdx1_4011 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004110300.1 4301291 R 652103 CDS YP_004110301.1 316935319 10066245 4302364..4303410 1 NC_014834.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: nha:Nham_2936 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 4303410 10066245 Rpdx1_4012 Rhodopseudomonas palustris DX-1 uroporphyrinogen decarboxylase YP_004110301.1 4302364 D 652103 CDS YP_004110302.1 316935320 10066246 4303787..4304518 1 NC_014834.1 PFAM: type IV pilus assembly PilZ; KEGG: bra:BRADO5217 hypothetical protein; type IV pilus assembly PilZ 4304518 10066246 Rpdx1_4013 Rhodopseudomonas palustris DX-1 type IV pilus assembly PilZ YP_004110302.1 4303787 D 652103 CDS YP_004110303.1 316935321 10066247 complement(4304544..4306316) 1 NC_014834.1 KEGG: rce:RC1_2082 magnesium chelatase subunit D; TIGRFAM: magnesium chelatase ATPase subunit D; SMART: von Willebrand factor type A; magnesium chelatase ATPase subunit D 4306316 10066247 Rpdx1_4014 Rhodopseudomonas palustris DX-1 magnesium chelatase ATPase subunit D YP_004110303.1 4304544 R 652103 CDS YP_004110304.1 316935322 10066248 complement(4306313..4307335) 1 NC_014834.1 SMART: AAA ATPase; TIGRFAM: magnesium chelatase ATPase subunit I; KEGG: rce:RC1_2081 magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase ChlI subunit; magnesium chelatase ATPase subunit I 4307335 10066248 Rpdx1_4015 Rhodopseudomonas palustris DX-1 magnesium chelatase ATPase subunit I YP_004110304.1 4306313 R 652103 CDS YP_004110305.1 316935323 10066249 complement(4307341..4308321) 1 NC_014834.1 KEGG: bra:BRADO1874 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 4308321 10066249 Rpdx1_4016 Rhodopseudomonas palustris DX-1 porphobilinogen deaminase YP_004110305.1 4307341 R 652103 CDS YP_004110306.1 316935324 10066250 4308571..4309884 1 NC_014834.1 KEGG: nha:Nham_1076 hypothetical protein; hypothetical protein 4309884 10066250 Rpdx1_4017 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110306.1 4308571 D 652103 CDS YP_004110307.1 316935325 10066251 4309884..4311488 1 NC_014834.1 KEGG: msl:Msil_2066 dienelactone hydrolase; dienelactone hydrolase 4311488 10066251 Rpdx1_4018 Rhodopseudomonas palustris DX-1 dienelactone hydrolase YP_004110307.1 4309884 D 652103 CDS YP_004110308.1 316935326 10066252 4311488..4311976 1 NC_014834.1 PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: rce:RC1_2526 hypothetical protein; NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 4311976 10066252 Rpdx1_4019 Rhodopseudomonas palustris DX-1 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 YP_004110308.1 4311488 D 652103 CDS YP_004110309.1 316935327 10066253 4312037..4313260 1 NC_014834.1 PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: rce:RC1_0144 coenzyme F420 hydrogenase; coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein 4313260 10066253 Rpdx1_4020 Rhodopseudomonas palustris DX-1 coenzyme F420 hydrogenase/dehydrogenase subunit beta domain-containing protein YP_004110309.1 4312037 D 652103 CDS YP_004110310.1 316935328 10066254 4313376..4313825 1 NC_014834.1 PFAM: Protein of unknown function DUF2383; KEGG: bra:BRADO4339 putative ribonucleotide reductase; hypothetical protein 4313825 10066254 Rpdx1_4021 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110310.1 4313376 D 652103 CDS YP_004110311.1 316935329 10066255 complement(4314280..4314726) 1 NC_014834.1 KEGG: bra:BRADO6559 hypothetical protein; hypothetical protein 4314726 10066255 Rpdx1_4022 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110311.1 4314280 R 652103 CDS YP_004110312.1 316935330 10066256 complement(4314933..4318100) 1 NC_014834.1 KEGG: bja:blr1516 RND multidrug efflux transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 4318100 10066256 Rpdx1_4023 Rhodopseudomonas palustris DX-1 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004110312.1 4314933 R 652103 CDS YP_004110313.1 316935331 10066257 complement(4318110..4319309) 1 NC_014834.1 KEGG: bja:blr1515 RND multidrug efflux membrane permease; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 4319309 10066257 Rpdx1_4024 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004110313.1 4318110 R 652103 CDS YP_004110314.1 316935332 10066258 complement(4319667..4321214) 1 NC_014834.1 PFAM: FAD dependent oxidoreductase; KEGG: pzu:PHZ_c1914 flavin binding monooxygenase; FAD dependent oxidoreductase 4321214 10066258 Rpdx1_4025 Rhodopseudomonas palustris DX-1 FAD dependent oxidoreductase YP_004110314.1 4319667 R 652103 CDS YP_004110315.1 316935333 10066259 complement(4321355..4321648) 1 NC_014834.1 KEGG: bcr:BCAH187_A0933 hypothetical protein; hypothetical protein 4321648 10066259 Rpdx1_4026 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110315.1 4321355 R 652103 CDS YP_004110316.1 316935334 10066260 complement(4321664..4322308) 1 NC_014834.1 KEGG: bbt:BBta_3084 hypothetical protein; hypothetical protein 4322308 10066260 Rpdx1_4027 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110316.1 4321664 R 652103 CDS YP_004110317.1 316935335 10066261 complement(4322327..4323766) 1 NC_014834.1 PFAM: PUCC protein; KEGG: bbt:BBta_3083 chlorophyll major facilitator superfamily (MFS) exporter PucC; PUCC protein 4323766 10066261 Rpdx1_4028 Rhodopseudomonas palustris DX-1 PUCC protein YP_004110317.1 4322327 R 652103 CDS YP_004110318.1 316935336 10066262 complement(4323952..4324131) 1 NC_014834.1 PFAM: antenna complex alpha/beta subunit; KEGG: hha:Hhal_1408 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 4324131 10066262 Rpdx1_4029 Rhodopseudomonas palustris DX-1 antenna complex subunit alpha/beta YP_004110318.1 4323952 R 652103 CDS YP_004110319.1 316935337 10066263 complement(4324144..4324299) 1 NC_014834.1 PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_3081 light harvesting protein B-800-850; antenna complex subunit alpha/beta 4324299 10066263 Rpdx1_4030 Rhodopseudomonas palustris DX-1 antenna complex subunit alpha/beta YP_004110319.1 4324144 R 652103 CDS YP_004110320.1 316935338 10066264 4324619..4326934 1 NC_014834.1 KEGG: bbt:BBta_3080 bacteriophytochrome; PFAM: GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein; multi-sensor signal transduction histidine kinase 4326934 10066264 Rpdx1_4031 Rhodopseudomonas palustris DX-1 multi-sensor signal transduction histidine kinase YP_004110320.1 4324619 D 652103 CDS YP_004110321.1 316935339 10066265 4326953..4327624 1 NC_014834.1 KEGG: bbt:BBta_3079 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family two component transcriptional regulator 4327624 10066265 Rpdx1_4032 Rhodopseudomonas palustris DX-1 LuxR family two component transcriptional regulator YP_004110321.1 4326953 D 652103 CDS YP_004110322.1 316935340 10066266 4327756..4328997 1 NC_014834.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr2779 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F 4328997 10066266 Rpdx1_4033 Rhodopseudomonas palustris DX-1 L-carnitine dehydratase/bile acid-inducible protein F YP_004110322.1 4327756 D 652103 CDS YP_004110323.1 316935341 10066267 complement(4329001..4329246) 1 NC_014834.1 KEGG: ace:Acel_0511 hypothetical protein; hypothetical protein 4329246 10066267 Rpdx1_4034 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110323.1 4329001 R 652103 CDS YP_004110324.1 316935342 10066268 complement(4329288..4330547) 1 NC_014834.1 PFAM: NnrS family protein; KEGG: bja:bll7083 hypothetical protein; NnrS family protein 4330547 10066268 Rpdx1_4035 Rhodopseudomonas palustris DX-1 NnrS family protein YP_004110324.1 4329288 R 652103 CDS YP_004110325.1 316935343 10066269 complement(4330673..4331365) 1 NC_014834.1 KEGG: NnrU family protein; NnrU family protein 4331365 10066269 Rpdx1_4036 Rhodopseudomonas palustris DX-1 NnrU family protein YP_004110325.1 4330673 R 652103 CDS YP_004110326.1 316935344 10066270 complement(4331543..4333195) 1 NC_014834.1 KEGG: bja:blr2389 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase, alpha-D-glucose phosphate-specific 4333195 10066270 Rpdx1_4037 Rhodopseudomonas palustris DX-1 phosphoglucomutase, alpha-D-glucose phosphate-specific YP_004110326.1 4331543 R 652103 CDS YP_004110327.1 316935345 10066271 complement(4333542..4334387) 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:blr6127 hypothetical protein; alpha/beta hydrolase fold protein 4334387 10066271 Rpdx1_4038 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004110327.1 4333542 R 652103 CDS YP_004110328.1 316935346 10066272 complement(4334583..4334945) 1 NC_014834.1 KEGG: msl:Msil_3741 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver 4334945 10066272 Rpdx1_4039 Rhodopseudomonas palustris DX-1 response regulator receiver YP_004110328.1 4334583 R 652103 CDS YP_004110329.1 316935347 10066273 complement(4335230..4336066) 1 NC_014834.1 PFAM: metallophosphoesterase; KEGG: bbt:BBta_5850 hypothetical protein; metallophosphoesterase 4336066 10066273 Rpdx1_4040 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004110329.1 4335230 R 652103 CDS YP_004110330.1 316935348 10066274 complement(4336091..4337152) 1 NC_014834.1 KEGG: bbt:BBta_5851 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein 4337152 10066274 Rpdx1_4041 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110330.1 4336091 R 652103 CDS YP_004110331.1 316935349 10066275 complement(4337149..4337934) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO5360 molybdenum ABC transporter permease; binding-protein-dependent transporter inner membrane component 4337934 10066275 Rpdx1_4042 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110331.1 4337149 R 652103 CDS YP_004110332.1 316935350 10066276 complement(4337939..4338754) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_5853 putative permease protein; binding-protein-dependent transporter inner membrane component 4338754 10066276 Rpdx1_4043 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110332.1 4337939 R 652103 CDS YP_004110333.1 316935351 10066277 complement(4338801..4339808) 1 NC_014834.1 PFAM: extracellular solute-binding protein family 1; KEGG: bra:BRADO5362 iron ABC transporter; family 1 extracellular solute-binding protein 4339808 10066277 Rpdx1_4044 Rhodopseudomonas palustris DX-1 family 1 extracellular solute-binding protein YP_004110333.1 4338801 R 652103 CDS YP_004110334.1 316935352 10066278 4340154..4340393 1 NC_014834.1 KEGG: apb:SAR116_0099 hypothetical protein; hypothetical protein 4340393 10066278 Rpdx1_4045 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110334.1 4340154 D 652103 CDS YP_004110335.1 316935353 10066279 4340656..4341120 1 NC_014834.1 KEGG: ddr:Deide_2p01890 putative phosphate ABC transporter, permease component, PstC; hypothetical protein 4341120 10066279 Rpdx1_4046 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110335.1 4340656 D 652103 CDS YP_004110336.1 316935354 10066280 complement(4341081..4341419) 1 NC_014834.1 KEGG: cwo:Cwoe_3413 hypothetical protein; hypothetical protein 4341419 10066280 Rpdx1_4047 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110336.1 4341081 R 652103 CDS YP_004110337.1 316935355 10066281 4341449..4343068 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_0716 peptide/oligopeptide/nickel ABC transporter substrate-binding protein; family 5 extracellular solute-binding protein 4343068 10066281 Rpdx1_4048 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004110337.1 4341449 D 652103 CDS YP_004110338.1 316935356 10066282 4343234..4344247 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr1037 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 4344247 10066282 Rpdx1_4049 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110338.1 4343234 D 652103 CDS YP_004110339.1 316935357 10066283 4344258..4345169 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_0718 putative dipeptide/oligopeptide/nickel ABC transporter, permease protein; binding-protein-dependent transporter inner membrane component 4345169 10066283 Rpdx1_4050 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110339.1 4344258 D 652103 CDS YP_004110340.1 316935358 10066284 4345172..4347013 1 NC_014834.1 KEGG: bja:blr1039 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter-like protein 4347013 10066284 Rpdx1_4051 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110340.1 4345172 D 652103 CDS YP_004110341.1 316935359 10066285 4347160..4347339 1 NC_014834.1 KEGG: bja:bsr1040 hypothetical protein; hypothetical protein 4347339 10066285 Rpdx1_4052 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110341.1 4347160 D 652103 CDS YP_004110342.1 316935360 10066286 4347287..4348744 1 NC_014834.1 KEGG: bbt:BBta_0721 amidase; TIGRFAM: amidohydrolase, AtzE family; PFAM: Amidase; amidohydrolase 3 4348744 10066286 Rpdx1_4053 Rhodopseudomonas palustris DX-1 amidohydrolase 3 YP_004110342.1 4347287 D 652103 CDS YP_004110343.1 316935361 10066287 4348747..4349142 1 NC_014834.1 KEGG: bra:BRADO6817 hypothetical protein; hypothetical protein 4349142 10066287 Rpdx1_4054 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110343.1 4348747 D 652103 CDS YP_004110344.1 316935362 10066288 4349139..4349882 1 NC_014834.1 KEGG: bbt:BBta_0723 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4349882 10066288 Rpdx1_4055 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004110344.1 4349139 D 652103 CDS YP_004110345.1 316935363 10066289 4349879..4351684 1 NC_014834.1 KEGG: bbt:BBta_0724 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase; allophanate hydrolase 4351684 10066289 Rpdx1_4056 Rhodopseudomonas palustris DX-1 allophanate hydrolase YP_004110345.1 4349879 D 652103 CDS YP_004110346.1 316935364 10066290 complement(4351699..4353513) 1 NC_014834.1 PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; KEGG: ret:RHE_CH02492 chloride channel protein; Cl- channel voltage-gated family protein 4353513 10066290 Rpdx1_4057 Rhodopseudomonas palustris DX-1 Cl- channel voltage-gated family protein YP_004110346.1 4351699 R 652103 CDS YP_004110347.1 316935365 10066291 4353760..4354566 1 NC_014834.1 KEGG: bbt:BBta_4584 putative gamma-glutamyl hydrolase family protein; PFAM: peptidase C26; gamma-glutamyl-gamma-aminobutyrate hydrolase 4354566 10066291 Rpdx1_4058 Rhodopseudomonas palustris DX-1 gamma-glutamyl-gamma-aminobutyrate hydrolase YP_004110347.1 4353760 D 652103 CDS YP_004110348.1 316935366 10066292 complement(4354794..4356644) 1 NC_014834.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: bja:bll4536 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 4356644 10066292 Rpdx1_4059 Rhodopseudomonas palustris DX-1 dihydroxy-acid dehydratase YP_004110348.1 4354794 R 652103 CDS YP_004110349.1 316935367 10066293 4356971..4358179 1 NC_014834.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rlt:Rleg2_2385 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 4358179 10066293 Rpdx1_4060 Rhodopseudomonas palustris DX-1 cobalamin synthesis protein P47K YP_004110349.1 4356971 D 652103 CDS YP_004110350.1 316935368 10066294 4358270..4359286 1 NC_014834.1 manually curated; KEGG: azc:AZC_2320 hypothetical protein; hypothetical protein 4359286 10066294 Rpdx1_4061 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110350.1 4358270 D 652103 CDS YP_004110351.1 316935369 10066295 complement(4359315..4361225) 1 NC_014834.1 KEGG: bja:blr3217 NorD protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; von Willebrand factor type A 4361225 10066295 Rpdx1_4062 Rhodopseudomonas palustris DX-1 von Willebrand factor type A YP_004110351.1 4359315 R 652103 CDS YP_004110352.1 316935370 10066296 complement(4361366..4362178) 1 NC_014834.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: bja:blr3216 NorQ protein; ATPase 4362178 10066296 Rpdx1_4063 Rhodopseudomonas palustris DX-1 ATPase YP_004110352.1 4361366 R 652103 CDS YP_004110353.1 316935371 10066297 complement(4362235..4363581) 1 NC_014834.1 KEGG: bja:blr3215 nitric oxide reductase subunit B; PFAM: cytochrome c oxidase subunit I; nitric-oxide reductase 4363581 10066297 Rpdx1_4064 Rhodopseudomonas palustris DX-1 nitric-oxide reductase YP_004110353.1 4362235 R 652103 CDS YP_004110354.1 316935372 10066298 complement(4363619..4364071) 1 NC_014834.1 KEGG: bmr:BMI_II242 nitric-oxide reductase, small subunit; nitric-oxide reductase small subunit 4364071 10066298 Rpdx1_4065 Rhodopseudomonas palustris DX-1 nitric-oxide reductase small subunit YP_004110354.1 4363619 R 652103 CDS YP_004110355.1 316935373 10066299 complement(4364184..4364453) 1 NC_014834.1 KEGG: bja:bsr3213 hypothetical protein; hypothetical protein 4364453 10066299 Rpdx1_4066 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110355.1 4364184 R 652103 CDS YP_004110356.1 316935374 10066300 complement(4364458..4365066) 1 NC_014834.1 PFAM: cytochrome c oxidase subunit III; KEGG: bbt:BBta_2086 NorE protein involved in nitric oxide reduction; cytochrome c oxidase subunit III 4365066 10066300 Rpdx1_4067 Rhodopseudomonas palustris DX-1 cytochrome c oxidase subunit III YP_004110356.1 4364458 R 652103 CDS YP_004110357.1 316935375 10066301 4365204..4365359 1 NC_014834.1 KEGG: bra:BRADO1773 putative signal peptide; hypothetical protein 4365359 10066301 Rpdx1_4068 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110357.1 4365204 D 652103 CDS YP_004110358.1 316935376 10066302 complement(4365366..4366319) 1 NC_014834.1 KEGG: bja:blr2724 hypothetical protein; hypothetical protein 4366319 10066302 Rpdx1_4069 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110358.1 4365366 R 652103 CDS YP_004110359.1 316935377 10066303 complement(4366357..4369665) 1 NC_014834.1 PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; carboxyl transferase; KEGG: bja:bll7292 pyruvate carboxylase; carbamoyl-phosphate synthase L chain ATP-binding protein 4369665 10066303 Rpdx1_4070 Rhodopseudomonas palustris DX-1 carbamoyl-phosphate synthase L chain ATP-binding protein YP_004110359.1 4366357 R 652103 CDS YP_004110360.1 316935378 10066304 complement(4369727..4371442) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll7293 acyl-CoA synthetase; AMP-dependent synthetase and ligase 4371442 10066304 Rpdx1_4071 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110360.1 4369727 R 652103 CDS YP_004110361.1 316935379 10066305 complement(4371469..4372353) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3435 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 4372353 10066305 Rpdx1_4072 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110361.1 4371469 R 652103 CDS YP_004110362.1 316935380 10066306 complement(4372350..4373306) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3428 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 4373306 10066306 Rpdx1_4073 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110362.1 4372350 R 652103 CDS YP_004110363.1 316935381 10066307 complement(4373359..4374912) 1 NC_014834.1 PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_3427 extracellular solute-binding protein; family 5 extracellular solute-binding protein 4374912 10066307 Rpdx1_4074 Rhodopseudomonas palustris DX-1 family 5 extracellular solute-binding protein YP_004110363.1 4373359 R 652103 CDS YP_004110364.1 316935382 10066308 complement(4374903..4375952) 1 NC_014834.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: vei:Veis_3426 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 4375952 10066308 Rpdx1_4075 Rhodopseudomonas palustris DX-1 oligopeptide/dipeptide ABC transporter ATPase YP_004110364.1 4374903 R 652103 CDS YP_004110365.1 316935383 10066309 complement(4375949..4376989) 1 NC_014834.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: vei:Veis_3425 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 4376989 10066309 Rpdx1_4076 Rhodopseudomonas palustris DX-1 oligopeptide/dipeptide ABC transporter ATPase YP_004110365.1 4375949 R 652103 CDS YP_004110366.1 316935384 10066310 4377232..4378044 1 NC_014834.1 KEGG: adg:Adeg_2096 transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4378044 10066310 Rpdx1_4077 Rhodopseudomonas palustris DX-1 GntR family transcriptional regulator YP_004110366.1 4377232 D 652103 CDS YP_004110367.1 316935385 10066311 4378618..4378809 1 NC_014834.1 KEGG: bbt:BBta_2219 hypothetical protein; hypothetical protein 4378809 10066311 Rpdx1_4078 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110367.1 4378618 D 652103 CDS YP_004110368.1 316935386 10066312 4379061..4379846 1 NC_014834.1 PFAM: NLPA lipoprotein; KEGG: azl:AZL_d03570 D-methionine transport system substrate-binding protein; NLPA lipoprotein 4379846 10066312 Rpdx1_4079 Rhodopseudomonas palustris DX-1 NLPA lipoprotein YP_004110368.1 4379061 D 652103 CDS YP_004110369.1 316935387 10066313 4379942..4381279 1 NC_014834.1 KEGG: azo:azo2395 phenylacetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate--CoA ligase 4381279 10066313 Rpdx1_4080 Rhodopseudomonas palustris DX-1 phenylacetate--CoA ligase YP_004110369.1 4379942 D 652103 CDS YP_004110370.1 316935388 10066314 complement(4381504..4382505) 1 NC_014834.1 PFAM: Integrase catalytic region; KEGG: swi:Swit_2359 integrase catalytic subunit; Integrase catalytic subunit 4382505 10066314 Rpdx1_4081 Rhodopseudomonas palustris DX-1 Integrase catalytic subunit YP_004110370.1 4381504 R 652103 CDS YP_004110371.1 316935389 10066316 complement(4384196..4384969) 1 NC_014834.1 KEGG: bra:BRADO4285 D-methionine ABC transporter protein, periplasmic binding protein; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein 4384969 10066316 Rpdx1_4083 Rhodopseudomonas palustris DX-1 lipoprotein YP_004110371.1 4384196 R 652103 CDS YP_004110372.1 316935390 10066317 complement(4384998..4385666) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_1144 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporter inner membrane component 4385666 10066317 Rpdx1_4084 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110372.1 4384998 R 652103 CDS YP_004110373.1 316935391 10066318 complement(4385656..4386762) 1 NC_014834.1 KEGG: azc:AZC_3691 ABC transporter ATP-binding protein; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; ABC transporter-like protein 4386762 10066318 Rpdx1_4085 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110373.1 4385656 R 652103 CDS YP_004110374.1 316935392 10066319 complement(4386952..4387899) 1 NC_014834.1 KEGG: msl:Msil_2419 serine O-acetyltransferase; Serine O-acetyltransferase 4387899 10066319 Rpdx1_4086 Rhodopseudomonas palustris DX-1 Serine O-acetyltransferase YP_004110374.1 4386952 R 652103 CDS YP_004110375.1 316935393 10066320 complement(4388059..4390038) 1 NC_014834.1 KEGG: mag:amb1849 cysteine desulfurase 1; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; cysteine desulfurase 4390038 10066320 Rpdx1_4087 Rhodopseudomonas palustris DX-1 cysteine desulfurase YP_004110375.1 4388059 R 652103 CDS YP_004110376.1 316935394 10066321 complement(4390025..4390969) 1 NC_014834.1 KEGG: azl:AZL_a00930 hypothetical protein; hypothetical protein 4390969 10066321 Rpdx1_4088 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110376.1 4390025 R 652103 CDS YP_004110377.1 316935395 10066322 4391513..4391911 1 NC_014834.1 KEGG: bbt:BBta_3429 hypothetical protein; hypothetical protein 4391911 10066322 Rpdx1_4089 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110377.1 4391513 D 652103 CDS YP_004110378.1 316935396 10066323 4392009..4392404 1 NC_014834.1 KEGG: bbt:BBta_3428 hypothetical protein; hypothetical protein 4392404 10066323 Rpdx1_4090 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110378.1 4392009 D 652103 CDS YP_004110379.1 316935397 10066324 4392492..4393886 1 NC_014834.1 KEGG: bbt:BBta_p0060 secretion protein HlyD precursor; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 4393886 10066324 Rpdx1_4091 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004110379.1 4392492 D 652103 CDS YP_004110380.1 316935398 10066325 4393883..4397041 1 NC_014834.1 KEGG: bbt:BBta_p0061 RND family outer membrane copper/silver/drug transport protein; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump 4397041 10066325 Rpdx1_4092 Rhodopseudomonas palustris DX-1 CzcA family heavy metal efflux pump YP_004110380.1 4393883 D 652103 CDS YP_004110381.1 316935399 10066326 4397165..4398427 1 NC_014834.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rec:RHECIAT_PC0000303 putative alcohol dehydrogenase protein; alcohol dehydrogenase GroES domain-containing protein 4398427 10066326 Rpdx1_4093 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase GroES domain-containing protein YP_004110381.1 4397165 D 652103 CDS YP_004110382.1 316935400 10066327 complement(4398547..4399038) 1 NC_014834.1 PFAM: protein of unknown function DUF892; KEGG: bra:BRADO5518 hypothetical protein; hypothetical protein 4399038 10066327 Rpdx1_4094 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110382.1 4398547 R 652103 CDS YP_004110383.1 316935401 10066328 complement(4399123..4399731) 1 NC_014834.1 PFAM: isochorismatase hydrolase; KEGG: pde:Pden_1636 isochorismatase hydrolase; isochorismatase hydrolase 4399731 10066328 Rpdx1_4095 Rhodopseudomonas palustris DX-1 isochorismatase hydrolase YP_004110383.1 4399123 R 652103 CDS YP_004110384.1 316935402 10066329 complement(4399728..4400084) 1 NC_014834.1 KEGG: mes:Meso_0331 hypothetical protein; hypothetical protein 4400084 10066329 Rpdx1_4096 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110384.1 4399728 R 652103 CDS YP_004110385.1 316935403 10066330 complement(4400413..4401198) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rec:RHECIAT_PC0000304 putative oxidoreductase protein; short-chain dehydrogenase/reductase SDR 4401198 10066330 Rpdx1_4097 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110385.1 4400413 R 652103 CDS YP_004110386.1 316935404 10066331 4401298..4402065 1 NC_014834.1 PFAM: protein of unknown function DUF72; KEGG: bbt:BBta_4267 hypothetical protein; hypothetical protein 4402065 10066331 Rpdx1_4098 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110386.1 4401298 D 652103 CDS YP_004110387.1 316935405 10066332 complement(4402069..4402191) 1 NC_014834.1 hypothetical protein 4402191 10066332 Rpdx1_4099 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110387.1 4402069 R 652103 CDS YP_004110388.1 316935406 10066333 4402403..4403278 1 NC_014834.1 KEGG: mdi:METDI3542 putative manganese catalase; PFAM: manganese containing catalase; catalase 4403278 10066333 Rpdx1_4100 Rhodopseudomonas palustris DX-1 catalase YP_004110388.1 4402403 D 652103 CDS YP_004110389.1 316935407 10066334 4403698..4404468 1 NC_014834.1 KEGG: mpo:Mpop_2886 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; Crp/Fnr family transcriptional regulator 4404468 10066334 Rpdx1_4101 Rhodopseudomonas palustris DX-1 Crp/Fnr family transcriptional regulator YP_004110389.1 4403698 D 652103 CDS YP_004110390.1 316935408 10066335 4404476..4405171 1 NC_014834.1 PFAM: HWE histidine kinase; KEGG: mrd:Mrad2831_0197 putative signal transduction histidine kinase; signal transduction histidine kinase 4405171 10066335 Rpdx1_4102 Rhodopseudomonas palustris DX-1 signal transduction histidine kinase YP_004110390.1 4404476 D 652103 CDS YP_004110391.1 316935409 10066336 4405280..4405477 1 NC_014834.1 KEGG: ptr:459066 intersectin 2; hypothetical protein 4405477 10066336 Rpdx1_4103 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110391.1 4405280 D 652103 CDS YP_004110392.1 316935410 10066337 4405767..4406135 1 NC_014834.1 SMART: response regulator receiver; KEGG: mno:Mnod_6449 response regulator receiver protein; response regulator receiver 4406135 10066337 Rpdx1_4104 Rhodopseudomonas palustris DX-1 response regulator receiver YP_004110392.1 4405767 D 652103 CDS YP_004110393.1 316935411 10066338 4406213..4407073 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nwi:Nwi_2662 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4407073 10066338 Rpdx1_4105 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110393.1 4406213 D 652103 CDS YP_004110394.1 316935412 10066339 4407272..4407520 1 NC_014834.1 PFAM: protein of unknown function DUF378; KEGG: bra:BRADO1751 hypothetical protein; hypothetical protein 4407520 10066339 Rpdx1_4106 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110394.1 4407272 D 652103 CDS YP_004110395.1 316935413 10066340 4407520..4408185 1 NC_014834.1 KEGG: bra:BRADO4332 hypothetical protein; hypothetical protein 4408185 10066340 Rpdx1_4107 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110395.1 4407520 D 652103 CDS YP_004110396.1 316935414 10066341 4408182..4408553 1 NC_014834.1 KEGG: bra:BRADO1771 putative signal peptide; hypothetical protein 4408553 10066341 Rpdx1_4108 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110396.1 4408182 D 652103 CDS YP_004110397.1 316935415 10066342 complement(4408694..4410145) 1 NC_014834.1 TIGRFAM: benzoyl-CoA oxygenase, B subunit; KEGG: bja:blr1081 benzoyl-CoA oxygenase component; benzoyl-CoA oxygenase subunit B 4410145 10066342 Rpdx1_4109 Rhodopseudomonas palustris DX-1 benzoyl-CoA oxygenase subunit B YP_004110397.1 4408694 R 652103 CDS YP_004110398.1 316935416 10066343 complement(4410322..4412016) 1 NC_014834.1 KEGG: bja:blr1080 benzoyl-CoA-dihydrodiol lyase; TIGRFAM: benzoyl-CoA-dihydrodiol lyase; PFAM: Enoyl-CoA hydratase/isomerase; benzoyl-CoA-dihydrodiol lyase 4412016 10066343 Rpdx1_4110 Rhodopseudomonas palustris DX-1 benzoyl-CoA-dihydrodiol lyase YP_004110398.1 4410322 R 652103 CDS YP_004110399.1 316935417 10066344 complement(4412145..4412966) 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:blr1078 putative hydrolase; alpha/beta hydrolase fold protein 4412966 10066344 Rpdx1_4111 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004110399.1 4412145 R 652103 CDS YP_004110400.1 316935418 10066345 complement(4412999..4414111) 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sti:Sthe_2859 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase zinc-binding domain-containing protein 4414111 10066345 Rpdx1_4112 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004110400.1 4412999 R 652103 CDS YP_004110401.1 316935419 10066346 4414304..4415029 1 NC_014834.1 KEGG: sil:SPOA0323 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 4415029 10066346 Rpdx1_4113 Rhodopseudomonas palustris DX-1 Crp/Fnr family transcriptional regulator YP_004110401.1 4414304 D 652103 CDS YP_004110402.1 316935420 10066347 complement(4415054..4416037) 1 NC_014834.1 KEGG: eba:ebA3602 4-hydroxybenzoyl-CoA reductase, beta subunit; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, beta subunit; PFAM: molybdopterin dehydrogenase FAD-binding; 4-hydroxybenzoyl-CoA reductase subunit beta 4416037 10066347 Rpdx1_4114 Rhodopseudomonas palustris DX-1 4-hydroxybenzoyl-CoA reductase subunit beta YP_004110402.1 4415054 R 652103 CDS YP_004110403.1 316935421 10066348 complement(4416034..4418367) 1 NC_014834.1 KEGG: eba:ebA3603 4-hydroxybenzoyl-CoA reductase, alpha subunit; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, alpha subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; 4-hydroxybenzoyl-CoA reductase subunit alpha 4418367 10066348 Rpdx1_4115 Rhodopseudomonas palustris DX-1 4-hydroxybenzoyl-CoA reductase subunit alpha YP_004110403.1 4416034 R 652103 CDS YP_004110404.1 316935422 10066349 complement(4418364..4418855) 1 NC_014834.1 KEGG: eba:ebA3604 4-hydroxybenzoyl-CoA reductase, gamma subunit; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, gamma subunit; PFAM: [2Fe-2S]-binding domain protein; ferredoxin; 4-hydroxybenzoyl-CoA reductase subunit gamma 4418855 10066349 Rpdx1_4116 Rhodopseudomonas palustris DX-1 4-hydroxybenzoyl-CoA reductase subunit gamma YP_004110404.1 4418364 R 652103 CDS YP_004110405.1 316935423 10066350 4419021..4420640 1 NC_014834.1 KEGG: bja:blr1077 acetyl-CoA synthetase; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; benzoate-CoA ligase family 4420640 10066350 Rpdx1_4117 Rhodopseudomonas palustris DX-1 benzoate-CoA ligase family YP_004110405.1 4419021 D 652103 CDS YP_004110406.1 316935424 10066351 4420815..4421993 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: lch:Lcho_3653 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4421993 10066351 Rpdx1_4118 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004110406.1 4420815 D 652103 CDS YP_004110407.1 316935425 10066352 4422075..4422935 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_1906 inner-membrane translocator; inner-membrane translocator 4422935 10066352 Rpdx1_4119 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110407.1 4422075 D 652103 CDS YP_004110408.1 316935426 10066353 4422938..4424725 1 NC_014834.1 KEGG: xau:Xaut_2704 ABC transporter related; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; ABC transporter-like protein 4424725 10066353 Rpdx1_4120 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110408.1 4422938 D 652103 CDS YP_004110409.1 316935427 10066354 4424722..4425444 1 NC_014834.1 KEGG: mag:amb2870 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4425444 10066354 Rpdx1_4121 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110409.1 4424722 D 652103 CDS YP_004110410.1 316935428 10066355 4425543..4426022 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gme:Gmet_2096 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4426022 10066355 Rpdx1_4122 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004110410.1 4425543 D 652103 CDS YP_004110411.1 316935429 10066356 4426084..4426548 1 NC_014834.1 KEGG: mag:amb3391 transcriptional regulator; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; BadM/Rrf2 family transcriptional regulator 4426548 10066356 Rpdx1_4123 Rhodopseudomonas palustris DX-1 BadM/Rrf2 family transcriptional regulator YP_004110411.1 4426084 D 652103 CDS YP_004110412.1 316935430 10066357 complement(4426595..4426840) 1 NC_014834.1 KEGG: tmz:Tmz1t_2947 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4426840 10066357 Rpdx1_4124 Rhodopseudomonas palustris DX-1 4Fe-4S ferredoxin YP_004110412.1 4426595 R 652103 CDS YP_004110413.1 316935431 10066358 complement(4426858..4428432) 1 NC_014834.1 KEGG: lch:Lcho_3655 benzoate-CoA ligase family; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; benzoate-CoA ligase family 4428432 10066358 Rpdx1_4125 Rhodopseudomonas palustris DX-1 benzoate-CoA ligase family YP_004110413.1 4426858 R 652103 CDS YP_004110414.1 316935432 10066359 complement(4428546..4429379) 1 NC_014834.1 TIGRFAM: benzoyl-CoA reductase, subunit D; CoA-substrate-specific enzyme activase; KEGG: tmz:Tmz1t_2948 benzoyl-CoA reductase, subunit D; PFAM: ATPase BadF/BadG/BcrA/BcrD type; benzoyl-CoA reductase subunit D 4429379 10066359 Rpdx1_4126 Rhodopseudomonas palustris DX-1 benzoyl-CoA reductase subunit D YP_004110414.1 4428546 R 652103 CDS YP_004110415.1 316935433 10066360 complement(4429433..4430746) 1 NC_014834.1 TIGRFAM: benzoyl-CoA reductase, subunit A; CoA-substrate-specific enzyme activase; KEGG: mag:amb2139 2-hydroxyglutaryl-CoA dehydratase activator protein; PFAM: ATPase BadF/BadG/BcrA/BcrD type; benzoyl-CoA reductase subunit A 4430746 10066360 Rpdx1_4127 Rhodopseudomonas palustris DX-1 benzoyl-CoA reductase subunit A YP_004110415.1 4429433 R 652103 CDS YP_004110416.1 316935434 10066361 complement(4430758..4432068) 1 NC_014834.1 TIGRFAM: benzoyl-CoA reductase, subunit B; KEGG: tmz:Tmz1t_2950 benzoyl-CoA reductase, subunit B; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; benzoyl-CoA reductase subunit B 4432068 10066361 Rpdx1_4128 Rhodopseudomonas palustris DX-1 benzoyl-CoA reductase subunit B YP_004110416.1 4430758 R 652103 CDS YP_004110417.1 316935435 10066362 complement(4432065..4433249) 1 NC_014834.1 TIGRFAM: benzoyl-CoA reductase, subunit C; KEGG: tmz:Tmz1t_2951 benzoyl-CoA reductase, subunit C; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; benzoyl-CoA reductase subunit C 4433249 10066362 Rpdx1_4129 Rhodopseudomonas palustris DX-1 benzoyl-CoA reductase subunit C YP_004110417.1 4432065 R 652103 CDS YP_004110418.1 316935436 10066363 complement(4433422..4434441) 1 NC_014834.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: lch:Lcho_2743 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 4434441 10066363 Rpdx1_4130 Rhodopseudomonas palustris DX-1 alcohol dehydrogenase zinc-binding domain-containing protein YP_004110418.1 4433422 R 652103 CDS YP_004110419.1 316935437 10066364 complement(4434516..4435043) 1 NC_014834.1 manually curated; PFAM: regulatory protein MarR; KEGG: reu:Reut_B3914 MarR family transcriptional regulator; SMART: regulatory protein MarR; regulatory protein MarR 4435043 10066364 Rpdx1_4131 Rhodopseudomonas palustris DX-1 regulatory protein MarR YP_004110419.1 4434516 R 652103 CDS YP_004110420.1 316935438 10066365 4435166..4435933 1 NC_014834.1 KEGG: lch:Lcho_1185 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; TIGRFAM: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase 4435933 10066365 Rpdx1_4132 Rhodopseudomonas palustris DX-1 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase YP_004110420.1 4435166 D 652103 CDS YP_004110421.1 316935439 10066366 4435963..4436745 1 NC_014834.1 KEGG: pna:Pnap_2124 naphthoate synthase; TIGRFAM: 2-ketocyclohexanecarboxyl-CoA hydrolase; PFAM: Enoyl-CoA hydratase/isomerase; 2-ketocyclohexanecarboxyl-CoA hydrolase 4436745 10066366 Rpdx1_4133 Rhodopseudomonas palustris DX-1 2-ketocyclohexanecarboxyl-CoA hydrolase YP_004110421.1 4435963 D 652103 CDS YP_004110422.1 316935440 10066367 4436811..4437962 1 NC_014834.1 KEGG: reu:Reut_B3917 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal; TIGRFAM: cyclohexanecarboxyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; cyclohexanecarboxyl-CoA dehydrogenase 4437962 10066367 Rpdx1_4134 Rhodopseudomonas palustris DX-1 cyclohexanecarboxyl-CoA dehydrogenase YP_004110422.1 4436811 D 652103 CDS YP_004110423.1 316935441 10066368 4438020..4439663 1 NC_014834.1 KEGG: lch:Lcho_1188 cyclohexanecarboxylate-CoA ligase; TIGRFAM: cyclohexanecarboxylate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; cyclohexanecarboxylate-CoA ligase 4439663 10066368 Rpdx1_4135 Rhodopseudomonas palustris DX-1 cyclohexanecarboxylate-CoA ligase YP_004110423.1 4438020 D 652103 CDS YP_004110424.1 316935442 10066369 4439691..4440467 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: lch:Lcho_1190 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4440467 10066369 Rpdx1_4136 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110424.1 4439691 D 652103 CDS YP_004110425.1 316935443 10066370 complement(4440573..4441076) 1 NC_014834.1 PFAM: Hemolysin-type calcium-binding region; KEGG: met:M446_1696 metallophosphoesterase; hemolysin-type calcium-binding protein 4441076 10066370 Rpdx1_4137 Rhodopseudomonas palustris DX-1 hemolysin-type calcium-binding protein YP_004110425.1 4440573 R 652103 CDS YP_004110426.1 316935444 10066371 complement(4441057..4445712) 1 NC_014834.1 KEGG: amr:AM1_E0108 hypothetical protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: glycerophosphoryl diester phosphodiesterase; Hemolysin-type calcium-binding region; outer membrane adhesin-like protein 4445712 10066371 Rpdx1_4138 Rhodopseudomonas palustris DX-1 outer membrane adhesin-like protein YP_004110426.1 4441057 R 652103 CDS YP_004110427.1 316935445 10066372 complement(4445861..4446661) 1 NC_014834.1 manually curated; PFAM: regulatory protein DeoR; KEGG: dat:HRM2_41360 GlpR1; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 4446661 10066372 Rpdx1_4139 Rhodopseudomonas palustris DX-1 DeoR family transcriptional regulator YP_004110427.1 4445861 R 652103 CDS YP_004110428.1 316935446 10066373 complement(4447076..4455403) 1 NC_014834.1 PFAM: 5'-Nucleotidase domain protein; Endonuclease/exonuclease/phosphatase; Hemolysin-type calcium-binding region; KEGG: syp:SYNPCC7002_G0067 endonuclease/exonuclease/phosphatase family protein; 5'-nucleotidase domain-containing protein 4455403 10066373 Rpdx1_4140 Rhodopseudomonas palustris DX-1 5'-nucleotidase domain-containing protein YP_004110428.1 4447076 R 652103 CDS YP_004110429.1 316935447 10066374 4455914..4457692 1 NC_014834.1 TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; KEGG: met:M446_3382 type I secretion system ATPase; SMART: AAA ATPase; type I secretion system ATPase 4457692 10066374 Rpdx1_4141 Rhodopseudomonas palustris DX-1 type I secretion system ATPase YP_004110429.1 4455914 D 652103 CDS YP_004110430.1 316935448 10066375 4457703..4459025 1 NC_014834.1 KEGG: met:M446_3383 HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; HlyD family type I secretion membrane fusion protein 4459025 10066375 Rpdx1_4142 Rhodopseudomonas palustris DX-1 HlyD family type I secretion membrane fusion protein YP_004110430.1 4457703 D 652103 CDS YP_004110431.1 316935449 10066376 complement(4459057..4460133) 1 NC_014834.1 KEGG: bbt:BBta_0545 putative nuclease-like protein; PFAM: Rare lipoprotein A; nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); Rare lipoprotein A 4460133 10066376 Rpdx1_4143 Rhodopseudomonas palustris DX-1 Rare lipoprotein A YP_004110431.1 4459057 R 652103 CDS YP_004110432.1 316935450 10066378 complement(4460839..4461144) 1 NC_014834.1 KEGG: bra:BRADO5892 putative signal peptide; hypothetical protein 4461144 10066378 Rpdx1_4144 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110432.1 4460839 R 652103 CDS YP_004110433.1 316935451 10066379 complement(4461221..4461859) 1 NC_014834.1 KEGG: bra:BRADO5893 putative N-methyltransferase; putative phosphatidylethanolamine or menaquinone biosynthesis methyltransferase (UbiE); PFAM: Methyltransferase type 11; phosphatidylethanolamine N-methyltransferase 4461859 10066379 Rpdx1_4145 Rhodopseudomonas palustris DX-1 phosphatidylethanolamine N-methyltransferase YP_004110433.1 4461221 R 652103 CDS YP_004110434.1 316935452 10066380 complement(4461879..4463084) 1 NC_014834.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: nwi:Nwi_0603 tRNA-specific 2-thiouridylase MnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4463084 10066380 Rpdx1_4146 Rhodopseudomonas palustris DX-1 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_004110434.1 4461879 R 652103 CDS YP_004110435.1 316935453 10066381 4463386..4464975 1 NC_014834.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: bja:blr6996 hypothetical protein; flagellar hook-length control protein-like, C-terminal domain 4464975 10066381 Rpdx1_4147 Rhodopseudomonas palustris DX-1 flagellar hook-length control protein-like, C-terminal domain YP_004110435.1 4463386 D 652103 CDS YP_004110436.1 316935454 10066382 4464988..4465707 1 NC_014834.1 PFAM: flagellar hook capping protein; KEGG: nha:Nham_0693 flagellar hook capping protein; flagellar hook capping protein 4465707 10066382 Rpdx1_4148 Rhodopseudomonas palustris DX-1 flagellar hook capping protein YP_004110436.1 4464988 D 652103 CDS YP_004110437.1 316935455 10066383 complement(4465745..4466563) 1 NC_014834.1 TIGRFAM: lytic murein transglycosylase; KEGG: nha:Nham_2862 lytic murein transglycosylase; lytic murein transglycosylase 4466563 10066383 Rpdx1_4149 Rhodopseudomonas palustris DX-1 lytic murein transglycosylase YP_004110437.1 4465745 R 652103 CDS YP_004110438.1 316935456 10066384 4466796..4467167 1 NC_014834.1 KEGG: bra:BRADO1363 hypothetical protein; hypothetical protein 4467167 10066384 Rpdx1_4150 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110438.1 4466796 D 652103 CDS YP_004110439.1 316935457 10066385 complement(4467355..4467918) 1 NC_014834.1 KEGG: bbt:BBta_4318 putative intracellular proteinase; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; intracellular protease 4467918 10066385 Rpdx1_4151 Rhodopseudomonas palustris DX-1 intracellular protease YP_004110439.1 4467355 R 652103 CDS YP_004110440.1 316935458 10066386 complement(4468154..4468495) 1 NC_014834.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cti:RALTA_A1510 conserved hypothetical protein, RmlC-like cupin domain; cupin 4468495 10066386 Rpdx1_4152 Rhodopseudomonas palustris DX-1 cupin YP_004110440.1 4468154 R 652103 CDS YP_004110441.1 316935459 10066387 4468793..4469908 1 NC_014834.1 KEGG: ccs:CCNA_01509 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; beta-ketoacyl-acyl-carrier-protein synthase I 4469908 10066387 Rpdx1_4153 Rhodopseudomonas palustris DX-1 beta-ketoacyl-acyl-carrier-protein synthase I YP_004110441.1 4468793 D 652103 CDS YP_004110442.1 316935460 10066388 4470102..4470953 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xau:Xaut_2588 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4470953 10066388 Rpdx1_4154 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110442.1 4470102 D 652103 CDS YP_004110443.1 316935461 10066389 complement(4471204..4472967) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: tmz:Tmz1t_2273 diguanylate cyclase; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; diguanylate cyclase 4472967 10066389 Rpdx1_4155 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004110443.1 4471204 R 652103 CDS YP_004110444.1 316935462 10066390 complement(4473195..4474286) 1 NC_014834.1 KEGG: mpo:Mpop_4695 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase 4474286 10066390 Rpdx1_4156 Rhodopseudomonas palustris DX-1 signal transduction histidine kinase YP_004110444.1 4473195 R 652103 CDS YP_004110445.1 316935463 10066392 4476353..4476676 1 NC_014834.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: neu:NE1365 helix-hairpin-helix DNA-binding motif-containing protein; SMART: helix-turn-helix domain protein; XRE family plasmid maintenance system antidote protein 4476676 10066392 Rpdx1_4158 Rhodopseudomonas palustris DX-1 XRE family plasmid maintenance system antidote protein YP_004110445.1 4476353 D 652103 CDS YP_004110446.1 316935464 10066393 complement(4476786..4476983) 1 NC_014834.1 PFAM: YcfA family protein; KEGG: mrb:Mrub_0742 YcfA family protein; hypothetical protein 4476983 10066393 Rpdx1_4159 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110446.1 4476786 R 652103 CDS YP_004110447.1 316935465 10066394 complement(4476983..4477216) 1 NC_014834.1 PFAM: Domain of unknown function DUF1902; KEGG: ttj:TTHA1013 hypothetical protein; hypothetical protein 4477216 10066394 Rpdx1_4160 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110447.1 4476983 R 652103 CDS YP_004110448.1 316935466 10066395 complement(4477333..4479429) 1 NC_014834.1 KEGG: bbt:BBta_6775 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RpoD subfamily RNA polymerase sigma 70 subunit 4479429 10066395 Rpdx1_4161 Rhodopseudomonas palustris DX-1 RpoD subfamily RNA polymerase sigma 70 subunit YP_004110448.1 4477333 R 652103 CDS YP_004110449.1 316935467 10066396 complement(4479689..4481695) 1 NC_014834.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase, DnaB-helicase binding domain; KEGG: bja:bll7350 DNA primase; SMART: Toprim sub domain protein; zinc finger CHC2-family protein; DNA primase 4481695 10066396 Rpdx1_4162 Rhodopseudomonas palustris DX-1 DNA primase YP_004110449.1 4479689 R 652103 CDS YP_004110450.1 316935468 10066397 4482163..4482405 1 NC_014834.1 KEGG: mgr:MGG_04377 hypothetical protein; hypothetical protein 4482405 10066397 Rpdx1_4163 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110450.1 4482163 D 652103 CDS YP_004110451.1 316935469 10066398 complement(4482427..4482831) 1 NC_014834.1 PFAM: AIG2 family protein; KEGG: bja:bll7352 hypothetical protein; AIG2 family protein 4482831 10066398 Rpdx1_4164 Rhodopseudomonas palustris DX-1 AIG2 family protein YP_004110451.1 4482427 R 652103 CDS YP_004110452.1 316935470 10066399 4482998..4483795 1 NC_014834.1 PFAM: N-formylglutamate amidohydrolase; KEGG: bbt:BBta_6779 hypothetical protein; N-formylglutamate amidohydrolase 4483795 10066399 Rpdx1_4165 Rhodopseudomonas palustris DX-1 N-formylglutamate amidohydrolase YP_004110452.1 4482998 D 652103 CDS YP_004110453.1 316935471 10066400 complement(4483922..4484539) 1 NC_014834.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bja:bll7356 putative efflux protein; lysine exporter protein LysE/YggA 4484539 10066400 Rpdx1_4166 Rhodopseudomonas palustris DX-1 lysine exporter protein LysE/YggA YP_004110453.1 4483922 R 652103 CDS YP_004110454.1 316935472 10066401 complement(4484729..4485577) 1 NC_014834.1 PFAM: Protein of unknown function DUF2189, transmembrane; KEGG: bja:bll7362 hypothetical protein; hypothetical protein 4485577 10066401 Rpdx1_4167 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110454.1 4484729 R 652103 CDS YP_004110455.1 316935473 10066402 complement(4486180..4486635) 1 NC_014834.1 PFAM: Protein of unknown function; KEGG: nha:Nham_2870 hypothetical protein; hypothetical protein 4486635 10066402 Rpdx1_4168 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110455.1 4486180 R 652103 CDS YP_004110456.1 316935474 10066403 complement(4486794..4487498) 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:bll7370 hydrolase; alpha/beta hydrolase fold protein 4487498 10066403 Rpdx1_4169 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004110456.1 4486794 R 652103 CDS YP_004110457.1 316935475 10066404 4487647..4488840 1 NC_014834.1 KEGG: bja:blr7371 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; carbamoyl-phosphate synthase small subunit 4488840 10066404 Rpdx1_4170 Rhodopseudomonas palustris DX-1 carbamoyl-phosphate synthase small subunit YP_004110457.1 4487647 D 652103 CDS YP_004110458.1 316935476 10066405 4489037..4489549 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bja:bll1207 hypothetical protein; thioesterase superfamily protein 4489549 10066405 Rpdx1_4171 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004110458.1 4489037 D 652103 CDS YP_004110459.1 316935477 10066406 4489591..4490115 1 NC_014834.1 KEGG: bra:BRADO1333 hypothetical protein; hypothetical protein 4490115 10066406 Rpdx1_4172 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110459.1 4489591 D 652103 CDS YP_004110460.1 316935478 10066407 complement(4490203..4490730) 1 NC_014834.1 PFAM: Ferritin Dps family protein; KEGG: bra:BRADO1329 putative DNA-binding stress protein (oxydative damage protectant); ferritin Dps family protein 4490730 10066407 Rpdx1_4173 Rhodopseudomonas palustris DX-1 ferritin Dps family protein YP_004110460.1 4490203 R 652103 CDS YP_004110461.1 316935479 10066408 4491008..4491703 1 NC_014834.1 PFAM: Methyltransferase type 12; KEGG: bbt:BBta_6798 putative S-adenosyl-L-methionine-dependent methyltransferase; type 12 methyltransferase 4491703 10066408 Rpdx1_4174 Rhodopseudomonas palustris DX-1 type 12 methyltransferase YP_004110461.1 4491008 D 652103 CDS YP_004110462.1 316935480 10066409 complement(4491770..4492879) 1 NC_014834.1 KEGG: nha:Nham_0686 exodeoxyribonuclease V; exodeoxyribonuclease V 4492879 10066409 Rpdx1_4175 Rhodopseudomonas palustris DX-1 exodeoxyribonuclease V YP_004110462.1 4491770 R 652103 CDS YP_004110463.1 316935481 10066410 complement(4492955..4493785) 1 NC_014834.1 KEGG: bja:bll5557 hypothetical protein; PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; transglutaminase domain-containing protein 4493785 10066410 Rpdx1_4176 Rhodopseudomonas palustris DX-1 transglutaminase domain-containing protein YP_004110463.1 4492955 R 652103 CDS YP_004110464.1 316935482 10066412 4494324..4494602 1 NC_014834.1 PFAM: protein of unknown function DUF1488; KEGG: bja:bsl0168 hypothetical protein; hypothetical protein 4494602 10066412 Rpdx1_4178 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110464.1 4494324 D 652103 CDS YP_004110465.1 316935483 10066413 4494660..4494815 1 NC_014834.1 KEGG: bbt:BBta_1870 hypothetical protein; hypothetical protein 4494815 10066413 Rpdx1_4179 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110465.1 4494660 D 652103 CDS YP_004110466.1 316935484 10066414 complement(4495223..4496602) 1 NC_014834.1 KEGG: nha:Nham_0687 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: AAA ATPase; response regulator receiver; Fis family two component sigma54 specific transcriptional regulator 4496602 10066414 Rpdx1_4180 Rhodopseudomonas palustris DX-1 Fis family two component sigma54 specific transcriptional regulator YP_004110466.1 4495223 R 652103 CDS YP_004110467.1 316935485 10066415 complement(4496649..4496996) 1 NC_014834.1 KEGG: nwi:Nwi_0596 flagellar motor switch protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliN 4496996 10066415 Rpdx1_4181 Rhodopseudomonas palustris DX-1 flagellar motor switch protein FliN YP_004110467.1 4496649 R 652103 CDS YP_004110468.1 316935486 10066416 complement(4497015..4497641) 1 NC_014834.1 KEGG: bja:blr7001 flagellar assembly protein H; flagellar assembly protein H 4497641 10066416 Rpdx1_4182 Rhodopseudomonas palustris DX-1 flagellar assembly protein H YP_004110468.1 4497015 R 652103 CDS YP_004110469.1 316935487 10066417 complement(4497641..4498729) 1 NC_014834.1 KEGG: nha:Nham_0690 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG 4498729 10066417 Rpdx1_4183 Rhodopseudomonas palustris DX-1 flagellar motor switch protein FliG YP_004110469.1 4497641 R 652103 CDS YP_004110470.1 316935488 10066418 complement(4498736..4500349) 1 NC_014834.1 KEGG: nha:Nham_0691 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; flagellar M-ring protein FliF 4500349 10066418 Rpdx1_4184 Rhodopseudomonas palustris DX-1 flagellar M-ring protein FliF YP_004110470.1 4498736 R 652103 CDS YP_004110471.1 316935489 10066419 complement(4500550..4500825) 1 NC_014834.1 PFAM: protein of unknown function DUF1153; KEGG: oca:OCAR_5210 flag1; hypothetical protein 4500825 10066419 Rpdx1_4185 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110471.1 4500550 R 652103 CDS YP_004110472.1 316935490 10066420 4501043..4501510 1 NC_014834.1 KEGG: bja:blr7780 hypothetical protein; hypothetical protein 4501510 10066420 Rpdx1_4186 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110472.1 4501043 D 652103 CDS YP_004110473.1 316935491 10066421 complement(4501482..4503077) 1 NC_014834.1 PFAM: FAD linked oxidase domain protein; KEGG: cwo:Cwoe_1045 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 4503077 10066421 Rpdx1_4187 Rhodopseudomonas palustris DX-1 FAD linked oxidase domain-containing protein YP_004110473.1 4501482 R 652103 CDS YP_004110474.1 316935492 10066422 complement(4503174..4504079) 1 NC_014834.1 PFAM: UspA domain protein; KEGG: oca:OCAR_5193 universal stress protein; UspA domain-containing protein 4504079 10066422 Rpdx1_4188 Rhodopseudomonas palustris DX-1 UspA domain-containing protein YP_004110474.1 4503174 R 652103 CDS YP_004110475.1 316935493 10066423 complement(4504129..4506873) 1 NC_014834.1 KEGG: pde:Pden_5102 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; HAD superfamily P-type ATPase 4506873 10066423 Rpdx1_4189 Rhodopseudomonas palustris DX-1 HAD superfamily P-type ATPase YP_004110475.1 4504129 R 652103 CDS YP_004110476.1 316935494 10066424 complement(4507132..4507464) 1 NC_014834.1 KEGG: cnb:CNBF0590 hypothetical protein; hypothetical protein 4507464 10066424 Rpdx1_4190 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110476.1 4507132 R 652103 CDS YP_004110477.1 316935495 10066425 4507737..4508534 1 NC_014834.1 KEGG: cobalamin 5'-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase 4508534 10066425 Rpdx1_4191 Rhodopseudomonas palustris DX-1 cobalamin 5'-phosphate synthase YP_004110477.1 4507737 D 652103 CDS YP_004110478.1 316935496 10066426 complement(4508686..4509030) 1 NC_014834.1 KEGG: bbt:BBta_0660 putative formamidase regulatory protein FmdB; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; FmdB family regulatory protein 4509030 10066426 Rpdx1_4192 Rhodopseudomonas palustris DX-1 FmdB family regulatory protein YP_004110478.1 4508686 R 652103 CDS YP_004110479.1 316935497 10066427 complement(4509270..4510499) 1 NC_014834.1 KEGG: bbt:BBta_0659 formamidase (formamide amidohydrolase); PFAM: Acetamidase/Formamidase; formamidase 4510499 10066427 Rpdx1_4193 Rhodopseudomonas palustris DX-1 formamidase YP_004110479.1 4509270 R 652103 CDS YP_004110480.1 316935498 10066428 complement(4510536..4511225) 1 NC_014834.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: bbt:BBta_0658 putative branched-chain amino acid ABC transporter ATP-binding protein; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE 4511225 10066428 Rpdx1_4194 Rhodopseudomonas palustris DX-1 urea ABC transporter ATP-binding protein UrtE YP_004110480.1 4510536 R 652103 CDS YP_004110481.1 316935499 10066429 complement(4511237..4511992) 1 NC_014834.1 KEGG: bja:blr0970 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; urea ABC transporter ATP-binding protein UrtD 4511992 10066429 Rpdx1_4195 Rhodopseudomonas palustris DX-1 urea ABC transporter ATP-binding protein UrtD YP_004110481.1 4511237 R 652103 CDS YP_004110482.1 316935500 10066430 complement(4512003..4513154) 1 NC_014834.1 KEGG: bja:blr0969 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; urea ABC transporter permease UrtC 4513154 10066430 Rpdx1_4196 Rhodopseudomonas palustris DX-1 urea ABC transporter permease UrtC YP_004110482.1 4512003 R 652103 CDS YP_004110483.1 316935501 10066431 complement(4513170..4514096) 1 NC_014834.1 KEGG: bja:blr0968 ABC transporter permease protein; TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; urea ABC transporter permease UrtB 4514096 10066431 Rpdx1_4197 Rhodopseudomonas palustris DX-1 urea ABC transporter permease UrtB YP_004110483.1 4513170 R 652103 CDS YP_004110484.1 316935502 10066432 complement(4514295..4515557) 1 NC_014834.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: bra:BRADO6897 branched chain amino-acid ABC transporter substrate-binding protein; urea ABC transporter urea-binding protein 4515557 10066432 Rpdx1_4198 Rhodopseudomonas palustris DX-1 urea ABC transporter urea-binding protein YP_004110484.1 4514295 R 652103 CDS YP_004110485.1 316935503 10066433 4515813..4519181 1 NC_014834.1 KEGG: bja:bll0966 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; integral membrane sensor hybrid histidine kinase 4519181 10066433 Rpdx1_4199 Rhodopseudomonas palustris DX-1 integral membrane sensor hybrid histidine kinase YP_004110485.1 4515813 D 652103 CDS YP_004110486.1 316935504 10066434 4519171..4520100 1 NC_014834.1 KEGG: bra:BRADO6899 CheY/LuxR family two-component transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family two component transcriptional regulator 4520100 10066434 Rpdx1_4200 Rhodopseudomonas palustris DX-1 LuxR family two component transcriptional regulator YP_004110486.1 4519171 D 652103 CDS YP_004110487.1 316935505 10066435 complement(4520127..4521086) 1 NC_014834.1 manually curated; TIGRFAM: ribonuclease BN; KEGG: bja:blr7476 hypothetical protein; PFAM: ribonuclease BN; ribonuclease BN 4521086 10066435 Rpdx1_4201 Rhodopseudomonas palustris DX-1 ribonuclease BN YP_004110487.1 4520127 R 652103 CDS YP_004110488.1 316935506 10066436 complement(4521277..4521990) 1 NC_014834.1 KEGG: noc:Noc_1592 hypothetical protein; hypothetical protein 4521990 10066436 Rpdx1_4202 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110488.1 4521277 R 652103 CDS YP_004110489.1 316935507 10066437 complement(4521987..4522379) 1 NC_014834.1 KEGG: nha:Nham_3878 hypothetical protein; hypothetical protein 4522379 10066437 Rpdx1_4203 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110489.1 4521987 R 652103 CDS YP_004110490.1 316935508 10066438 complement(4522363..4522965) 1 NC_014834.1 KEGG: nha:Nham_3877 hypothetical protein; hypothetical protein 4522965 10066438 Rpdx1_4204 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110490.1 4522363 R 652103 CDS YP_004110491.1 316935509 10066439 complement(4522981..4524147) 1 NC_014834.1 KEGG: nha:Nham_3876 hypothetical protein; hypothetical protein 4524147 10066439 Rpdx1_4205 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110491.1 4522981 R 652103 CDS YP_004110492.1 316935510 10066440 4524474..4525982 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pol:Bpro_5258 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4525982 10066440 Rpdx1_4206 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110492.1 4524474 D 652103 CDS YP_004110493.1 316935511 10066441 complement(4526002..4526832) 1 NC_014834.1 TIGRFAM: TonB family protein; KEGG: bja:bll7071 TonB protein; TonB family protein 4526832 10066441 Rpdx1_4207 Rhodopseudomonas palustris DX-1 TonB family protein YP_004110493.1 4526002 R 652103 CDS YP_004110494.1 316935512 10066442 complement(4526829..4527266) 1 NC_014834.1 KEGG: bja:bll7072 biopolymer transport protein; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TonB system transport protein ExbD 4527266 10066442 Rpdx1_4208 Rhodopseudomonas palustris DX-1 TonB system transport protein ExbD YP_004110494.1 4526829 R 652103 CDS YP_004110495.1 316935513 10066443 complement(4527271..4528071) 1 NC_014834.1 KEGG: bja:bll7073 biopolymer transport protein; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB 4528071 10066443 Rpdx1_4209 Rhodopseudomonas palustris DX-1 tonB-system energizer ExbB YP_004110495.1 4527271 R 652103 CDS YP_004110496.1 316935514 10066444 4528397..4529245 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr7268 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4529245 10066444 Rpdx1_4210 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110496.1 4528397 D 652103 CDS YP_004110497.1 316935515 10066445 4529249..4530385 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr7269 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4530385 10066445 Rpdx1_4211 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004110497.1 4529249 D 652103 CDS YP_004110498.1 316935516 10066446 4530404..4531600 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr7270 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4531600 10066446 Rpdx1_4212 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004110498.1 4530404 D 652103 CDS YP_004110499.1 316935517 10066447 complement(4531847..4533181) 1 NC_014834.1 KEGG: mag:amb1245 coenzyme F390 synthetase; PFAM: AMP-dependent synthetase and ligase; phenylacetate--CoA ligase 4533181 10066447 Rpdx1_4213 Rhodopseudomonas palustris DX-1 phenylacetate--CoA ligase YP_004110499.1 4531847 R 652103 CDS YP_004110500.1 316935518 10066448 complement(4533205..4533765) 1 NC_014834.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: ddf:DEFDS_0925 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; pyruvate/ketoisovalerate oxidoreductase catalytic subunit 4533765 10066448 Rpdx1_4214 Rhodopseudomonas palustris DX-1 pyruvate/ketoisovalerate oxidoreductase catalytic subunit YP_004110500.1 4533205 R 652103 CDS YP_004110501.1 316935519 10066449 complement(4533780..4534610) 1 NC_014834.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dap:Dacet_2341 thiamine pyrophosphate protein domain protein TPP-binding protein; thiamine pyrophosphate domain-containing TPP-binding protein 4534610 10066449 Rpdx1_4215 Rhodopseudomonas palustris DX-1 thiamine pyrophosphate domain-containing TPP-binding protein YP_004110501.1 4533780 R 652103 CDS YP_004110502.1 316935520 10066450 complement(4534612..4535775) 1 NC_014834.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: pth:PTH_0847 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 4535775 10066450 Rpdx1_4216 Rhodopseudomonas palustris DX-1 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_004110502.1 4534612 R 652103 CDS YP_004110503.1 316935521 10066451 complement(4535772..4536716) 1 NC_014834.1 KEGG: swo:Swol_1195 indolepyruvate oxidoreductase subunit beta; PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Indolepyruvate ferredoxin oxidoreductase 4536716 10066451 Rpdx1_4217 Rhodopseudomonas palustris DX-1 Indolepyruvate ferredoxin oxidoreductase YP_004110503.1 4535772 R 652103 CDS YP_004110504.1 316935522 10066453 4537019..4537819 1 NC_014834.1 KEGG: bja:blr3164 hypothetical protein; hypothetical protein 4537819 10066453 Rpdx1_4219 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110504.1 4537019 D 652103 CDS YP_004110505.1 316935523 10066454 complement(4538009..4538884) 1 NC_014834.1 PFAM: Mammalian cell entry related domain protein; KEGG: bja:bll5892 hypothetical protein; mammalian cell entry related domain-containing protein 4538884 10066454 Rpdx1_4220 Rhodopseudomonas palustris DX-1 mammalian cell entry related domain-containing protein YP_004110505.1 4538009 R 652103 CDS YP_004110506.1 316935524 10066455 complement(4539022..4539795) 1 NC_014834.1 KEGG: bra:BRADO5085 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4539795 10066455 Rpdx1_4221 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110506.1 4539022 R 652103 CDS YP_004110507.1 316935525 10066456 complement(4539798..4540949) 1 NC_014834.1 PFAM: protein of unknown function DUF140; KEGG: nha:Nham_1315 hypothetical protein; hypothetical protein 4540949 10066456 Rpdx1_4222 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110507.1 4539798 R 652103 CDS YP_004110508.1 316935526 10066457 4541054..4542049 1 NC_014834.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: nha:Nham_1314 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 4542049 10066457 Rpdx1_4223 Rhodopseudomonas palustris DX-1 mandelate racemase/muconate lactonizing protein YP_004110508.1 4541054 D 652103 CDS YP_004110509.1 316935527 10066458 complement(4542019..4543227) 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll5896 putative 3-phenylpropionic acid transporter; major facilitator superfamily protein 4543227 10066458 Rpdx1_4224 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004110509.1 4542019 R 652103 CDS YP_004110510.1 316935528 10066459 4543303..4544844 1 NC_014834.1 KEGG: bra:BRADO5089 hypothetical protein; hypothetical protein 4544844 10066459 Rpdx1_4225 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110510.1 4543303 D 652103 CDS YP_004110511.1 316935529 10066460 complement(4544892..4545887) 1 NC_014834.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bra:BRADO5091 putative threonine dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta 4545887 10066460 Rpdx1_4226 Rhodopseudomonas palustris DX-1 pyridoxal-5'-phosphate-dependent protein subunit beta YP_004110511.1 4544892 R 652103 CDS YP_004110512.1 316935530 10066461 complement(4545935..4546990) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: oca:OCAR_5346 glycosyl transferase, group 1; glycosyl transferase group 1 protein 4546990 10066461 Rpdx1_4227 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004110512.1 4545935 R 652103 CDS YP_004110513.1 316935531 10066462 complement(4546990..4547787) 1 NC_014834.1 PFAM: metallophosphoesterase; KEGG: nha:Nham_1311 metallophosphoesterase; metallophosphoesterase 4547787 10066462 Rpdx1_4228 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004110513.1 4546990 R 652103 CDS YP_004110514.1 316935532 10066463 complement(4547841..4548497) 1 NC_014834.1 KEGG: oca:OCAR_5344 phosphatidylethanolamine N-methyltransferase; PFAM: Methyltransferase type 11; phosphatidylethanolamine N-methyltransferase 4548497 10066463 Rpdx1_4229 Rhodopseudomonas palustris DX-1 phosphatidylethanolamine N-methyltransferase YP_004110514.1 4547841 R 652103 CDS YP_004110515.1 316935533 10066464 complement(4548590..4549390) 1 NC_014834.1 TIGRFAM: phosphomethylpyrimidine kinase; KEGG: bja:bll5905 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 4549390 10066464 Rpdx1_4230 Rhodopseudomonas palustris DX-1 phosphomethylpyrimidine kinase YP_004110515.1 4548590 R 652103 CDS YP_004110516.1 316935534 10066465 4549530..4549775 1 NC_014834.1 PFAM: Transcription regulator AsnC-type-like; KEGG: nha:Nham_1309 AsnC family transcriptional regulator; transcriptional regulator AsnC-type-like protein 4549775 10066465 Rpdx1_4231 Rhodopseudomonas palustris DX-1 transcriptional regulator AsnC-type-like protein YP_004110516.1 4549530 D 652103 CDS YP_004110517.1 316935535 10066466 complement(4549783..4550712) 1 NC_014834.1 KEGG: bbt:BBta_5605 diheme cytochrome c-type; gluconate 2-dehydrogenase 4550712 10066466 Rpdx1_4232 Rhodopseudomonas palustris DX-1 gluconate 2-dehydrogenase YP_004110517.1 4549783 R 652103 CDS YP_004110518.1 316935536 10066467 complement(4550746..4551195) 1 NC_014834.1 PFAM: cytochrome c class II; KEGG: bbt:BBta_5606 cytochrome c, class II; cytochrome c class II 4551195 10066467 Rpdx1_4233 Rhodopseudomonas palustris DX-1 cytochrome c class II YP_004110518.1 4550746 R 652103 CDS YP_004110519.1 316935537 10066468 complement(4551308..4553629) 1 NC_014834.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bra:BRADO5140 putative aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 4553629 10066468 Rpdx1_4234 Rhodopseudomonas palustris DX-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_004110519.1 4551308 R 652103 CDS YP_004110520.1 316935538 10066469 complement(4553911..4554198) 1 NC_014834.1 KEGG: nha:Nham_2128 hypothetical protein; hypothetical protein 4554198 10066469 Rpdx1_4235 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110520.1 4553911 R 652103 CDS YP_004110521.1 316935539 10066470 4554626..4556431 1 NC_014834.1 PFAM: Carbamoyltransferase; KEGG: nha:Nham_2127 carbamoyltransferase; carbamoyltransferase 4556431 10066470 Rpdx1_4236 Rhodopseudomonas palustris DX-1 carbamoyltransferase YP_004110521.1 4554626 D 652103 CDS YP_004110522.1 316935540 10066471 complement(4556432..4557961) 1 NC_014834.1 KEGG: bbt:BBta_5611 putative virulence factor MviN-like protein; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN 4557961 10066471 Rpdx1_4237 Rhodopseudomonas palustris DX-1 integral membrane protein MviN YP_004110522.1 4556432 R 652103 CDS YP_004110523.1 316935541 10066472 complement(4558155..4559306) 1 NC_014834.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bbt:BBta_5614 putative aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 4559306 10066472 Rpdx1_4238 Rhodopseudomonas palustris DX-1 DegT/DnrJ/EryC1/StrS aminotransferase YP_004110523.1 4558155 R 652103 CDS YP_004110524.1 316935542 10066473 complement(4559363..4560361) 1 NC_014834.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bja:bll5918 putative dehydrogenase; oxidoreductase domain-containing protein 4560361 10066473 Rpdx1_4239 Rhodopseudomonas palustris DX-1 oxidoreductase domain-containing protein YP_004110524.1 4559363 R 652103 CDS YP_004110525.1 316935543 10066474 complement(4560502..4561485) 1 NC_014834.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bja:bll5920 UDP-glucuronic acid epimerase; NAD-dependent epimerase/dehydratase 4561485 10066474 Rpdx1_4240 Rhodopseudomonas palustris DX-1 NAD-dependent epimerase/dehydratase YP_004110525.1 4560502 R 652103 CDS YP_004110526.1 316935544 10066475 4561675..4562634 1 NC_014834.1 KEGG: bja:blr5921 hypothetical protein; hypothetical protein 4562634 10066475 Rpdx1_4241 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110526.1 4561675 D 652103 CDS YP_004110527.1 316935545 10066476 4562689..4563702 1 NC_014834.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: bbt:BBta_5665 putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase; glycosyl transferase family protein 4563702 10066476 Rpdx1_4242 Rhodopseudomonas palustris DX-1 glycosyl transferase family protein YP_004110527.1 4562689 D 652103 CDS YP_004110528.1 316935546 10066477 complement(4563707..4565647) 1 NC_014834.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: bja:bll5925 putative capsular polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 4565647 10066477 Rpdx1_4243 Rhodopseudomonas palustris DX-1 polysaccharide biosynthesis protein CapD YP_004110528.1 4563707 R 652103 CDS YP_004110529.1 316935547 10066478 complement(4565685..4567157) 1 NC_014834.1 KEGG: bbt:BBta_5668 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; rfaE bifunctional protein 4567157 10066478 Rpdx1_4244 Rhodopseudomonas palustris DX-1 rfaE bifunctional protein YP_004110529.1 4565685 R 652103 CDS YP_004110530.1 316935548 10066479 complement(4567182..4568162) 1 NC_014834.1 KEGG: bja:bll5928 ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; ADP-L-glycero-D-manno-heptose-6-epimerase 4568162 10066479 Rpdx1_4245 Rhodopseudomonas palustris DX-1 ADP-L-glycero-D-manno-heptose-6-epimerase YP_004110530.1 4567182 R 652103 CDS YP_004110531.1 316935549 10066480 4568348..4569424 1 NC_014834.1 KEGG: bra:BRADO5203 ADP-heptose--LPS heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase II 4569424 10066480 Rpdx1_4246 Rhodopseudomonas palustris DX-1 lipopolysaccharide heptosyltransferase II YP_004110531.1 4568348 D 652103 CDS YP_004110532.1 316935550 10066481 4569495..4570082 1 NC_014834.1 PFAM: sugar isomerase (SIS); KEGG: bbt:BBta_5671 phosphoheptose isomerase; sugar isomerase 4570082 10066481 Rpdx1_4247 Rhodopseudomonas palustris DX-1 sugar isomerase YP_004110532.1 4569495 D 652103 CDS YP_004110533.1 316935551 10066482 4570079..4570621 1 NC_014834.1 KEGG: oca:OCAR_5331 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; histidinol-phosphate phosphatase family protein 4570621 10066482 Rpdx1_4248 Rhodopseudomonas palustris DX-1 histidinol-phosphate phosphatase family protein YP_004110533.1 4570079 D 652103 CDS YP_004110534.1 316935552 10066483 complement(4570618..4571562) 1 NC_014834.1 KEGG: nha:Nham_1294 lipopolysaccharide heptosyltransferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase I 4571562 10066483 Rpdx1_4249 Rhodopseudomonas palustris DX-1 lipopolysaccharide heptosyltransferase I YP_004110534.1 4570618 R 652103 CDS YP_004110535.1 316935553 10066484 4571745..4572758 1 NC_014834.1 KEGG: bja:blr5931 UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 4572758 10066484 Rpdx1_4250 Rhodopseudomonas palustris DX-1 UDP-glucose 4-epimerase YP_004110535.1 4571745 D 652103 CDS YP_004110536.1 316935554 10066485 4572880..4574682 1 NC_014834.1 KEGG: nha:Nham_1292 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein 4574682 10066485 Rpdx1_4251 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110536.1 4572880 D 652103 CDS YP_004110537.1 316935555 10066486 4574741..4575442 1 NC_014834.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bja:blr5933 hypothetical protein; fumarylacetoacetate (FAA) hydrolase 4575442 10066486 Rpdx1_4252 Rhodopseudomonas palustris DX-1 fumarylacetoacetate (FAA) hydrolase YP_004110537.1 4574741 D 652103 CDS YP_004110538.1 316935556 10066487 4575522..4575659 1 NC_014834.1 hypothetical protein 4575659 10066487 Rpdx1_4253 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110538.1 4575522 D 652103 CDS YP_004110539.1 316935557 10066488 complement(4575661..4576515) 1 NC_014834.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: nha:Nham_2798 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4576515 10066488 Rpdx1_4254 Rhodopseudomonas palustris DX-1 NAD-dependent epimerase/dehydratase YP_004110539.1 4575661 R 652103 CDS YP_004110540.1 316935558 10066489 4576835..4582789 1 NC_014834.1 KEGG: nwi:Nwi_0909 putative DNA helicase; putative DNA helicase 4582789 10066489 Rpdx1_4255 Rhodopseudomonas palustris DX-1 putative DNA helicase YP_004110540.1 4576835 D 652103 CDS YP_004110541.1 316935559 10066490 complement(4582758..4583837) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dar:Daro_2825 PAS:GGDEF; SMART: GGDEF domain containing protein; diguanylate cyclase 4583837 10066490 Rpdx1_4256 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004110541.1 4582758 R 652103 CDS YP_004110542.1 316935560 10066491 4584135..4586240 1 NC_014834.1 KEGG: bbt:BBta_4919 putative DEAD-box cold-shock protein, ATP-independent RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 4586240 10066491 Rpdx1_4257 Rhodopseudomonas palustris DX-1 DEAD/DEAH box helicase YP_004110542.1 4584135 D 652103 CDS YP_004110543.1 316935561 10066492 complement(4586346..4587617) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll2940 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4587617 10066492 Rpdx1_4258 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004110543.1 4586346 R 652103 CDS YP_004110544.1 316935562 10066493 4587958..4588509 1 NC_014834.1 KEGG: mes:Meso_0938 hypothetical protein; hypothetical protein 4588509 10066493 Rpdx1_4259 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110544.1 4587958 D 652103 CDS YP_004110545.1 316935563 10066494 4588684..4589064 1 NC_014834.1 PFAM: Secreted repeat of unknown function; KEGG: oca:OCAR_6987 secreted repeat protein; hypothetical protein 4589064 10066494 Rpdx1_4260 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110545.1 4588684 D 652103 CDS YP_004110546.1 316935564 10066495 4589080..4589589 1 NC_014834.1 KEGG: mea:Mex_1p1232 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; ECF subfamily RNA polymerase sigma-24 subunit 4589589 10066495 Rpdx1_4261 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004110546.1 4589080 D 652103 CDS YP_004110547.1 316935565 10066496 4589586..4590368 1 NC_014834.1 KEGG: mch:Mchl_5734 putative transmembrane anti-sigma factor; putative transmembrane anti-sigma factor 4590368 10066496 Rpdx1_4262 Rhodopseudomonas palustris DX-1 putative transmembrane anti-sigma factor YP_004110547.1 4589586 D 652103 CDS YP_004110548.1 316935566 10066497 complement(4590395..4591267) 1 NC_014834.1 PFAM: ABC-3 protein; KEGG: spe:Spro_2130 ABC-3 protein; ABC-3 protein 4591267 10066497 Rpdx1_4263 Rhodopseudomonas palustris DX-1 ABC-3 protein YP_004110548.1 4590395 R 652103 CDS YP_004110549.1 316935567 10066498 complement(4591264..4592139) 1 NC_014834.1 PFAM: ABC-3 protein; KEGG: rhi:NGR_c31040 putative iron transmembrane ABC transporter component; ABC-3 protein 4592139 10066498 Rpdx1_4264 Rhodopseudomonas palustris DX-1 ABC-3 protein YP_004110549.1 4591264 R 652103 CDS YP_004110550.1 316935568 10066499 complement(4592141..4593037) 1 NC_014834.1 KEGG: spe:Spro_2132 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4593037 10066499 Rpdx1_4265 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110550.1 4592141 R 652103 CDS YP_004110551.1 316935569 10066500 complement(4593034..4593951) 1 NC_014834.1 PFAM: periplasmic solute binding protein; KEGG: hit:NTHI0481 putative periplasmic chelated iron binding protein; periplasmic solute-binding protein 4593951 10066500 Rpdx1_4266 Rhodopseudomonas palustris DX-1 periplasmic solute-binding protein YP_004110551.1 4593034 R 652103 CDS YP_004110552.1 316935570 10066501 complement(4594012..4594956) 1 NC_014834.1 KEGG: bra:BRADO1425 putative signal peptide; hypothetical protein 4594956 10066501 Rpdx1_4267 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110552.1 4594012 R 652103 CDS YP_004110553.1 316935571 10066502 4595233..4595697 1 NC_014834.1 KEGG: bbt:BBta_1555 manganese transport regulator MntR; PFAM: iron dependent repressor; SMART: iron dependent repressor; iron (metal) dependent repressor 4595697 10066502 Rpdx1_4268 Rhodopseudomonas palustris DX-1 iron (metal) dependent repressor YP_004110553.1 4595233 D 652103 CDS YP_004110554.1 316935572 10066503 4596089..4596226 1 NC_014834.1 KEGG: bbt:BBta_7669 hypothetical protein; hypothetical protein 4596226 10066503 Rpdx1_4269 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110554.1 4596089 D 652103 CDS YP_004110555.1 316935573 10066504 4596604..4596990 1 NC_014834.1 KEGG: xau:Xaut_0925 hypothetical protein; hypothetical protein 4596990 10066504 Rpdx1_4270 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110555.1 4596604 D 652103 CDS YP_004110556.1 316935574 10066505 complement(4597195..4598052) 1 NC_014834.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_0510 LysR family transcriptional regulator; LysR family transcriptional regulator 4598052 10066505 Rpdx1_4271 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004110556.1 4597195 R 652103 CDS YP_004110557.1 316935575 10066506 4598153..4598530 1 NC_014834.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bja:blr7299 hypothetical protein; 4-oxalocrotonate tautomerase 4598530 10066506 Rpdx1_4272 Rhodopseudomonas palustris DX-1 4-oxalocrotonate tautomerase YP_004110557.1 4598153 D 652103 CDS YP_004110558.1 316935576 10066507 4598598..4598738 1 NC_014834.1 KEGG: rhi:NGR_b02650 hypothetical protein; hypothetical protein 4598738 10066507 Rpdx1_4273 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110558.1 4598598 D 652103 CDS YP_004110559.1 316935577 10066508 complement(4598952..4600361) 1 NC_014834.1 TIGRFAM: adenosylhomocysteinase; KEGG: oca:OCAR_5321 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; adenosylhomocysteinase 4600361 10066508 Rpdx1_4274 Rhodopseudomonas palustris DX-1 adenosylhomocysteinase YP_004110559.1 4598952 R 652103 CDS YP_004110560.1 316935578 10066509 complement(4600622..4601818) 1 NC_014834.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: bbt:BBta_5699 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 4601818 10066509 Rpdx1_4275 Rhodopseudomonas palustris DX-1 S-adenosylmethionine synthetase YP_004110560.1 4600622 R 652103 CDS YP_004110561.1 316935579 10066510 complement(4601883..4603235) 1 NC_014834.1 manually curated; KEGG: bra:BRADO5240 hypothetical protein; hypothetical protein 4603235 10066510 Rpdx1_4276 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110561.1 4601883 R 652103 CDS YP_004110562.1 316935580 10066511 4603441..4604751 1 NC_014834.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: bja:bll8129 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 4604751 10066511 Rpdx1_4277 Rhodopseudomonas palustris DX-1 nucleotide sugar dehydrogenase YP_004110562.1 4603441 D 652103 CDS YP_004110563.1 316935581 10066512 4605021..4606202 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_0893 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4606202 10066512 Rpdx1_4278 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004110563.1 4605021 D 652103 CDS YP_004110564.1 316935582 10066513 4606370..4607242 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: xau:Xaut_0892 inner-membrane translocator; inner-membrane translocator 4607242 10066513 Rpdx1_4279 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110564.1 4606370 D 652103 CDS YP_004110565.1 316935583 10066514 4607246..4608190 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: xau:Xaut_0891 inner-membrane translocator; inner-membrane translocator 4608190 10066514 Rpdx1_4280 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110565.1 4607246 D 652103 CDS YP_004110566.1 316935584 10066515 4608187..4608969 1 NC_014834.1 KEGG: xau:Xaut_0890 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4608969 10066515 Rpdx1_4281 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110566.1 4608187 D 652103 CDS YP_004110567.1 316935585 10066516 4608962..4609666 1 NC_014834.1 KEGG: xau:Xaut_0889 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4609666 10066516 Rpdx1_4282 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110567.1 4608962 D 652103 CDS YP_004110568.1 316935586 10066517 complement(4609901..4611022) 1 NC_014834.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: bbt:BBta_5702 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; vitamin-B12 independent methionine synthase 4611022 10066517 Rpdx1_4283 Rhodopseudomonas palustris DX-1 vitamin-B12 independent methionine synthase YP_004110568.1 4609901 R 652103 CDS YP_004110569.1 316935587 10066518 complement(4611038..4611754) 1 NC_014834.1 KEGG: bja:bll5949 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4611754 10066518 Rpdx1_4284 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110569.1 4611038 R 652103 CDS YP_004110570.1 316935588 10066519 complement(4611763..4612515) 1 NC_014834.1 KEGG: bja:bll5950 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4612515 10066519 Rpdx1_4285 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110570.1 4611763 R 652103 CDS YP_004110571.1 316935589 10066520 complement(4612512..4613540) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bja:bll5951 ABC transporter permease protein; inner-membrane translocator 4613540 10066520 Rpdx1_4286 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110571.1 4612512 R 652103 CDS YP_004110572.1 316935590 10066521 complement(4613540..4614406) 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bra:BRADO5253 putative high-affinity branched-chain amino acid transport system permease protein; inner-membrane translocator 4614406 10066521 Rpdx1_4287 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110572.1 4613540 R 652103 CDS YP_004110573.1 316935591 10066522 complement(4614550..4615728) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO5254 branched chain amino acid ABC transporter; extracellular ligand-binding receptor 4615728 10066522 Rpdx1_4288 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004110573.1 4614550 R 652103 CDS YP_004110574.1 316935592 10066523 4616058..4616354 1 NC_014834.1 KEGG: bja:blr5954 hypothetical protein; hypothetical protein 4616354 10066523 Rpdx1_4289 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110574.1 4616058 D 652103 CDS YP_004110575.1 316935593 10066524 complement(4616415..4617278) 1 NC_014834.1 KEGG: bbt:BBta_5709 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; formyltetrahydrofolate deformylase 4617278 10066524 Rpdx1_4290 Rhodopseudomonas palustris DX-1 formyltetrahydrofolate deformylase YP_004110575.1 4616415 R 652103 CDS YP_004110576.1 316935594 10066525 4617411..4618262 1 NC_014834.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: bbt:BBta_5710 putative uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 4618262 10066525 Rpdx1_4291 Rhodopseudomonas palustris DX-1 uroporphyrinogen III synthase HEM4 YP_004110576.1 4617411 D 652103 CDS YP_004110577.1 316935595 10066526 4618530..4619759 1 NC_014834.1 KEGG: met:M446_3169 ABC transporter, periplasmic branched chain amino acid binding protein; ABC transporter periplasmic branched chain amino acid-binding protein 4619759 10066526 Rpdx1_4292 Rhodopseudomonas palustris DX-1 ABC transporter periplasmic branched chain amino acid-binding protein YP_004110577.1 4618530 D 652103 CDS YP_004110578.1 316935596 10066527 4619951..4620898 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: mno:Mnod_0225 inner-membrane translocator; inner-membrane translocator 4620898 10066527 Rpdx1_4293 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110578.1 4619951 D 652103 CDS YP_004110579.1 316935597 10066528 4620895..4622196 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: mno:Mnod_0224 inner-membrane translocator; inner-membrane translocator 4622196 10066528 Rpdx1_4294 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110579.1 4620895 D 652103 CDS YP_004110580.1 316935598 10066529 4622193..4622942 1 NC_014834.1 KEGG: rpi:Rpic_1451 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4622942 10066529 Rpdx1_4295 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110580.1 4622193 D 652103 CDS YP_004110581.1 316935599 10066530 4622942..4623637 1 NC_014834.1 KEGG: mno:Mnod_0222 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4623637 10066530 Rpdx1_4296 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110581.1 4622942 D 652103 CDS YP_004110582.1 316935600 10066531 4623742..4624176 1 NC_014834.1 KEGG: bja:bll4578 transcriptional regulatory protein; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; MerR family transcriptional regulator 4624176 10066531 Rpdx1_4297 Rhodopseudomonas palustris DX-1 MerR family transcriptional regulator YP_004110582.1 4623742 D 652103 CDS YP_004110583.1 316935601 10066532 4624196..4624504 1 NC_014834.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: pna:Pnap_2188 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 4624504 10066532 Rpdx1_4298 Rhodopseudomonas palustris DX-1 carboxymuconolactone decarboxylase YP_004110583.1 4624196 D 652103 CDS YP_004110584.1 316935602 10066533 4624655..4625242 1 NC_014834.1 KEGG: bra:BRADO7117 hypothetical protein; hypothetical protein 4625242 10066533 Rpdx1_4299 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110584.1 4624655 D 652103 CDS YP_004110585.1 316935603 10066534 4625371..4627320 1 NC_014834.1 KEGG: rer:RER_10020 hypothetical protein; hypothetical protein 4627320 10066534 Rpdx1_4300 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110585.1 4625371 D 652103 CDS YP_004110586.1 316935604 10066535 4627609..4628436 1 NC_014834.1 KEGG: bja:blr5962 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4628436 10066535 Rpdx1_4301 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110586.1 4627609 D 652103 CDS YP_004110587.1 316935605 10066536 4628433..4630364 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr5963 putative long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 4630364 10066536 Rpdx1_4302 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110587.1 4628433 D 652103 CDS YP_004110588.1 316935606 10066537 4630708..4631601 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bja:blr5964 ABC transporter permease protein; inner-membrane translocator 4631601 10066537 Rpdx1_4303 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110588.1 4630708 D 652103 CDS YP_004110589.1 316935607 10066538 4631603..4632676 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bja:blr5965 ABC transporter permease protein; inner-membrane translocator 4632676 10066538 Rpdx1_4304 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110589.1 4631603 D 652103 CDS YP_004110590.1 316935608 10066539 4632735..4634015 1 NC_014834.1 KEGG: bja:blr5966 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 4634015 10066539 Rpdx1_4305 Rhodopseudomonas palustris DX-1 ABC transporter substrate-binding protein YP_004110590.1 4632735 D 652103 CDS YP_004110591.1 316935609 10066540 4634263..4635105 1 NC_014834.1 KEGG: bja:blr5967 ABC transporter substrate-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4635105 10066540 Rpdx1_4306 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110591.1 4634263 D 652103 CDS YP_004110592.1 316935610 10066541 complement(4635115..4636206) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: ara:Arad_4831 mannosyltransferase B; glycosyl transferase group 1 protein 4636206 10066541 Rpdx1_4307 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004110592.1 4635115 R 652103 CDS YP_004110593.1 316935611 10066542 4636349..4637230 1 NC_014834.1 KEGG: ara:Arad_4835 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase 4637230 10066542 Rpdx1_4308 Rhodopseudomonas palustris DX-1 glucose-1-phosphate thymidylyltransferase YP_004110593.1 4636349 D 652103 CDS YP_004110594.1 316935612 10066543 4637308..4638465 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: nha:Nham_2777 glycosyl transferase, group 1; glycosyl transferase group 1 protein 4638465 10066543 Rpdx1_4309 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004110594.1 4637308 D 652103 CDS YP_004110595.1 316935613 10066544 4638580..4639416 1 NC_014834.1 PFAM: ABC-2 type transporter; KEGG: epy:EpC_14020 O-antigen ABC transporter permease; ABC-2 type transporter 4639416 10066544 Rpdx1_4310 Rhodopseudomonas palustris DX-1 ABC-2 type transporter YP_004110595.1 4638580 D 652103 CDS YP_004110596.1 316935614 10066545 4639427..4640188 1 NC_014834.1 KEGG: eta:ETA_13390 O-antigen ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4640188 10066545 Rpdx1_4311 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110596.1 4639427 D 652103 CDS YP_004110597.1 316935615 10066546 complement(4640143..4641348) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: glycosyl transferase group 1; glycosyl transferase group 1 protein 4641348 10066546 Rpdx1_4312 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004110597.1 4640143 R 652103 CDS YP_004110598.1 316935616 10066547 complement(4641345..4642469) 1 NC_014834.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ara:Arad_4847 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 4642469 10066547 Rpdx1_4313 Rhodopseudomonas palustris DX-1 UDP-N-acetylglucosamine 2-epimerase YP_004110598.1 4641345 R 652103 CDS YP_004110599.1 316935617 10066548 complement(4642462..4644033) 1 NC_014834.1 KEGG: ara:Arad_4846 hypothetical protein; hypothetical protein 4644033 10066548 Rpdx1_4314 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110599.1 4642462 R 652103 CDS YP_004110600.1 316935618 10066549 complement(4644047..4645447) 1 NC_014834.1 KEGG: ara:Arad_4843 hypothetical protein; hypothetical protein 4645447 10066549 Rpdx1_4315 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110600.1 4644047 R 652103 CDS YP_004110601.1 316935619 10066550 complement(4645569..4646543) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: ara:Arad_4842 glycosyl transferase protein; glycosyl transferase group 1 protein 4646543 10066550 Rpdx1_4316 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004110601.1 4645569 R 652103 CDS YP_004110602.1 316935620 10066551 complement(4646591..4647466) 1 NC_014834.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: ara:Arad_4838 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 4647466 10066551 Rpdx1_4317 Rhodopseudomonas palustris DX-1 dTDP-4-dehydrorhamnose reductase YP_004110602.1 4646591 R 652103 CDS YP_004110603.1 316935621 10066552 complement(4647506..4648537) 1 NC_014834.1 KEGG: ara:Arad_4837 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase 4648537 10066552 Rpdx1_4318 Rhodopseudomonas palustris DX-1 dTDP-glucose 4,6-dehydratase YP_004110603.1 4647506 R 652103 CDS YP_004110604.1 316935622 10066553 4648868..4649959 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: ara:Arad_4841 glycosyltransferase protein; glycosyl transferase group 1 protein 4649959 10066553 Rpdx1_4319 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004110604.1 4648868 D 652103 CDS YP_004110605.1 316935623 10066554 4650066..4651316 1 NC_014834.1 KEGG: ddc:Dd586_0661 glycosyl transferase group 1; glycosyl transferase group 1 protein 4651316 10066554 Rpdx1_4320 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004110605.1 4650066 D 652103 CDS YP_004110606.1 316935624 10066555 complement(4651358..4654258) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: ddc:Dd586_0663 glycosyl transferase group 1; glycosyl transferase group 1 protein 4654258 10066555 Rpdx1_4321 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004110606.1 4651358 R 652103 CDS YP_004110607.1 316935625 10066556 complement(4654255..4656186) 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: ddc:Dd586_0662 glycosyl transferase group 1; glycosyl transferase group 1 protein 4656186 10066556 Rpdx1_4322 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004110607.1 4654255 R 652103 CDS YP_004110608.1 316935626 10066557 complement(4656423..4657367) 1 NC_014834.1 KEGG: hypothetical protein; hypothetical protein 4657367 10066557 Rpdx1_4323 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110608.1 4656423 R 652103 CDS YP_004110609.1 316935627 10066558 4657708..4658262 1 NC_014834.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: swi:Swit_4018 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 4658262 10066558 Rpdx1_4324 Rhodopseudomonas palustris DX-1 dTDP-4-dehydrorhamnose 3,5-epimerase YP_004110609.1 4657708 D 652103 CDS YP_004110610.1 316935628 10066559 4658421..4659401 1 NC_014834.1 KEGG: met:M446_5189 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; GDP-mannose 4,6-dehydratase 4659401 10066559 Rpdx1_4325 Rhodopseudomonas palustris DX-1 GDP-mannose 4,6-dehydratase YP_004110610.1 4658421 D 652103 CDS YP_004110611.1 316935629 10066560 4659407..4660378 1 NC_014834.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: gox:GOX1611 GDP-6-deoxy-D-lyxo-4-hexulose reductase; NAD-dependent epimerase/dehydratase 4660378 10066560 Rpdx1_4326 Rhodopseudomonas palustris DX-1 NAD-dependent epimerase/dehydratase YP_004110611.1 4659407 D 652103 CDS YP_004110612.1 316935630 10066561 4660619..4662031 1 NC_014834.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: nwi:Nwi_1075 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4662031 10066561 Rpdx1_4327 Rhodopseudomonas palustris DX-1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_004110612.1 4660619 D 652103 CDS YP_004110613.1 316935631 10066562 4662100..4663596 1 NC_014834.1 KEGG: bra:BRADO0757 putative phosphomannomutase/phosphoglucomutase (PMM / PGM); PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphomannomutase 4663596 10066562 Rpdx1_4328 Rhodopseudomonas palustris DX-1 phosphomannomutase YP_004110613.1 4662100 D 652103 CDS YP_004110614.1 316935632 10066563 4663735..4664079 1 NC_014834.1 KEGG: ago:AGOS_AFR093W AFR093Wp; hypothetical protein 4664079 10066563 Rpdx1_4329 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110614.1 4663735 D 652103 CDS YP_004110615.1 316935633 10066564 complement(4664195..4664440) 1 NC_014834.1 KEGG: bbt:BBta_1854 hypothetical protein; hypothetical protein 4664440 10066564 Rpdx1_4330 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110615.1 4664195 R 652103 CDS YP_004110616.1 316935634 10066565 complement(4664679..4665092) 1 NC_014834.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: nha:Nham_1128 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 4665092 10066565 Rpdx1_4331 Rhodopseudomonas palustris DX-1 methionine-R-sulfoxide reductase YP_004110616.1 4664679 R 652103 CDS YP_004110617.1 316935635 10066566 complement(4665123..4665833) 1 NC_014834.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bja:blr7043 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 4665833 10066566 Rpdx1_4332 Rhodopseudomonas palustris DX-1 peptide methionine sulfoxide reductase YP_004110617.1 4665123 R 652103 CDS YP_004110618.1 316935636 10066568 4666393..4669722 1 NC_014834.1 KEGG: oca:OCAR_5131 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit 4669722 10066568 Rpdx1_4333 Rhodopseudomonas palustris DX-1 carbamoyl-phosphate synthase large subunit YP_004110618.1 4666393 D 652103 CDS YP_004110619.1 316935637 10066569 4669945..4670421 1 NC_014834.1 KEGG: bra:BRADO1324 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; GreA/GreB family elongation factor 4670421 10066569 Rpdx1_4334 Rhodopseudomonas palustris DX-1 GreA/GreB family elongation factor YP_004110619.1 4669945 D 652103 CDS YP_004110620.1 316935638 10066570 4670670..4671080 1 NC_014834.1 PFAM: DoxX family protein; KEGG: bbt:BBta_6801 hypothetical protein; DoxX family protein 4671080 10066570 Rpdx1_4335 Rhodopseudomonas palustris DX-1 DoxX family protein YP_004110620.1 4670670 D 652103 CDS YP_004110621.1 316935639 10066571 complement(4671096..4671578) 1 NC_014834.1 KEGG: nwi:Nwi_2452 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 4671578 10066571 Rpdx1_4336 Rhodopseudomonas palustris DX-1 AsnC family transcriptional regulator YP_004110621.1 4671096 R 652103 CDS YP_004110622.1 316935640 10066572 4671835..4672800 1 NC_014834.1 KEGG: bja:blr7381 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 4672800 10066572 Rpdx1_4337 Rhodopseudomonas palustris DX-1 thioredoxin reductase YP_004110622.1 4671835 D 652103 CDS YP_004110623.1 316935641 10066573 4672808..4673731 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bra:BRADO1320 LysR family transcriptional regulator; LysR family transcriptional regulator 4673731 10066573 Rpdx1_4338 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004110623.1 4672808 D 652103 CDS YP_004110624.1 316935642 10066574 complement(4674074..4674748) 1 NC_014834.1 KEGG: nwi:Nwi_2455 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 4674748 10066574 Rpdx1_4339 Rhodopseudomonas palustris DX-1 cobyrinic acid a,c-diamide synthase YP_004110624.1 4674074 R 652103 CDS YP_004110625.1 316935643 10066575 complement(4674971..4675345) 1 NC_014834.1 KEGG: nwi:Nwi_2456 hypothetical protein; hypothetical protein 4675345 10066575 Rpdx1_4340 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110625.1 4674971 R 652103 CDS YP_004110626.1 316935644 10066576 complement(4675441..4675764) 1 NC_014834.1 KEGG: bja:bll7386 hypothetical protein; hypothetical protein 4675764 10066576 Rpdx1_4341 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110626.1 4675441 R 652103 CDS YP_004110627.1 316935645 10066578 complement(4676277..4676708) 1 NC_014834.1 KEGG: bja:bll7395 hypothetical protein; TIGRFAM: phasin; PFAM: Phasin; phasin 4676708 10066578 Rpdx1_4342 Rhodopseudomonas palustris DX-1 phasin YP_004110627.1 4676277 R 652103 CDS YP_004110628.1 316935646 10066579 complement(4676949..4677332) 1 NC_014834.1 KEGG: oca:OCAR_5121 phasin 2; TIGRFAM: phasin; PFAM: Phasin; phasin 4677332 10066579 Rpdx1_4343 Rhodopseudomonas palustris DX-1 phasin YP_004110628.1 4676949 R 652103 CDS YP_004110629.1 316935647 10066580 4677671..4681258 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: histidine kinase A domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; KEGG: bja:blr7396 two-component hybrid sensor and regulator; SMART: histidine kinase A domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein; PAS/PAC sensor signal transduction histidine kinase 4681258 10066580 Rpdx1_4344 Rhodopseudomonas palustris DX-1 PAS/PAC sensor signal transduction histidine kinase YP_004110629.1 4677671 D 652103 CDS YP_004110630.1 316935648 10066581 4681534..4681785 1 NC_014834.1 PFAM: Rv0623 family protein transcription factor; KEGG: gvi:gsr3224 hypothetical protein; protein transcription factor 4681785 10066581 Rpdx1_4345 Rhodopseudomonas palustris DX-1 protein transcription factor YP_004110630.1 4681534 D 652103 CDS YP_004110631.1 316935649 10066582 4681782..4682186 1 NC_014834.1 PFAM: PilT protein domain protein; KEGG: mva:Mvan_1171 PilT domain-containing protein; PilT domain-containing protein 4682186 10066582 Rpdx1_4346 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004110631.1 4681782 D 652103 CDS YP_004110632.1 316935650 10066583 4682270..4682980 1 NC_014834.1 KEGG: bja:blr7084 transcriptional regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 4682980 10066583 Rpdx1_4347 Rhodopseudomonas palustris DX-1 Crp/Fnr family transcriptional regulator YP_004110632.1 4682270 D 652103 CDS YP_004110633.1 316935651 10066584 complement(4682977..4683177) 1 NC_014834.1 KEGG: bja:bsl7085 hypothetical protein; hypothetical protein 4683177 10066584 Rpdx1_4348 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110633.1 4682977 R 652103 CDS YP_004110634.1 316935652 10066585 4683413..4684525 1 NC_014834.1 TIGRFAM: nitrite reductase, copper-containing; KEGG: bbt:BBta_6826 copper-containing nitrite reductase (NO-forming) NirK; PFAM: multicopper oxidase type 1; multicopper oxidase type 3; nitrite reductase 4684525 10066585 Rpdx1_4349 Rhodopseudomonas palustris DX-1 nitrite reductase YP_004110634.1 4683413 D 652103 CDS YP_004110635.1 316935653 10066586 4684666..4685547 1 NC_014834.1 PFAM: protein of unknown function DUF323; KEGG: bja:blr7090 periplasmic nitrate reductase; hypothetical protein 4685547 10066586 Rpdx1_4350 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110635.1 4684666 D 652103 CDS YP_004110636.1 316935654 10066587 4685698..4687242 1 NC_014834.1 TIGRFAM: thymidine phosphorylase; KEGG: bja:bll3117 thymidine phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase domain; glycosyl transferase family 3; thymidine phosphorylase 4687242 10066587 Rpdx1_4351 Rhodopseudomonas palustris DX-1 thymidine phosphorylase YP_004110636.1 4685698 D 652103 CDS YP_004110637.1 316935655 10066588 4687239..4688150 1 NC_014834.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: nha:Nham_1899 phosphoribosylpyrophosphate synthetase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 4688150 10066588 Rpdx1_4352 Rhodopseudomonas palustris DX-1 ribose-phosphate pyrophosphokinase YP_004110637.1 4687239 D 652103 CDS YP_004110638.1 316935656 10066589 4688147..4689769 1 NC_014834.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: bja:bll3115 hypothetical protein; RNA-metabolising metallo-beta-lactamase 4689769 10066589 Rpdx1_4353 Rhodopseudomonas palustris DX-1 RNA-metabolising metallo-beta-lactamase YP_004110638.1 4688147 D 652103 CDS YP_004110639.1 316935657 10066590 4689947..4690162 1 NC_014834.1 KEGG: pen:PSEEN5412 hypothetical protein; hypothetical protein 4690162 10066590 Rpdx1_4354 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110639.1 4689947 D 652103 CDS YP_004110640.1 316935658 10066591 4690320..4691330 1 NC_014834.1 PFAM: extracellular solute-binding protein family 1; KEGG: oca:OCAR_5119 extracellular solute-binding protein, family 1; family 1 extracellular solute-binding protein 4691330 10066591 Rpdx1_4355 Rhodopseudomonas palustris DX-1 family 1 extracellular solute-binding protein YP_004110640.1 4690320 D 652103 CDS YP_004110641.1 316935659 10066592 4691474..4693120 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oca:OCAR_5118 ferric iron uptake ABC transporter (FeT) family, permease protein; binding-protein-dependent transporter inner membrane component 4693120 10066592 Rpdx1_4356 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110641.1 4691474 D 652103 CDS YP_004110642.1 316935660 10066593 4693251..4693889 1 NC_014834.1 KEGG: nha:Nham_1248 hypothetical protein; hypothetical protein 4693889 10066593 Rpdx1_4357 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110642.1 4693251 D 652103 CDS YP_004110643.1 316935661 10066594 complement(4693872..4694675) 1 NC_014834.1 KEGG: atc:AGR_C_4537 hypothetical protein; TIGRFAM: pyrimidine utilization protein D; PFAM: alpha/beta hydrolase fold; pyrimidine utilization protein D 4694675 10066594 Rpdx1_4358 Rhodopseudomonas palustris DX-1 pyrimidine utilization protein D YP_004110643.1 4693872 R 652103 CDS YP_004110644.1 316935662 10066595 complement(4694681..4695466) 1 NC_014834.1 KEGG: azc:AZC_2497 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4695466 10066595 Rpdx1_4359 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110644.1 4694681 R 652103 CDS YP_004110645.1 316935663 10066596 complement(4695459..4696274) 1 NC_014834.1 PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_2496 hydrolase; alpha/beta hydrolase fold protein 4696274 10066596 Rpdx1_4360 Rhodopseudomonas palustris DX-1 alpha/beta hydrolase fold protein YP_004110645.1 4695459 R 652103 CDS YP_004110646.1 316935664 10066597 complement(4696283..4697122) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2495 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 4697122 10066597 Rpdx1_4361 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110646.1 4696283 R 652103 CDS YP_004110647.1 316935665 10066598 complement(4697125..4697511) 1 NC_014834.1 KEGG: mrd:Mrad2831_1582 endoribonuclease L-PSP; TIGRFAM: pyrimidine utilization protein C; PFAM: Endoribonuclease L-PSP; pyrimidine utilization protein C 4697511 10066598 Rpdx1_4362 Rhodopseudomonas palustris DX-1 pyrimidine utilization protein C YP_004110647.1 4697125 R 652103 CDS YP_004110648.1 316935666 10066599 complement(4697541..4698227) 1 NC_014834.1 PFAM: isochorismatase hydrolase; KEGG: ecg:E2348C_1062 predicted enzyme; isochorismatase hydrolase 4698227 10066599 Rpdx1_4363 Rhodopseudomonas palustris DX-1 isochorismatase hydrolase YP_004110648.1 4697541 R 652103 CDS YP_004110649.1 316935667 10066600 complement(4698242..4699300) 1 NC_014834.1 KEGG: azc:AZC_2492 putative ABC-type nitrate/sulfonate/bicarbonate transport; putative ABC-type nitrate/sulfonate/bicarbonate transport 4699300 10066600 Rpdx1_4364 Rhodopseudomonas palustris DX-1 putative ABC-type nitrate/sulfonate/bicarbonate transport YP_004110649.1 4698242 R 652103 CDS YP_004110650.1 316935668 10066601 complement(4699403..4700317) 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mrd:Mrad2831_4382 LysR family transcriptional regulator; LysR family transcriptional regulator 4700317 10066601 Rpdx1_4365 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004110650.1 4699403 R 652103 CDS YP_004110651.1 316935669 10066602 complement(4700485..4702338) 1 NC_014834.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: avn:Avin_08270 ATP-dependent metallopeptidase M41, FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; ATP-dependent metalloprotease FtsH 4702338 10066602 Rpdx1_4366 Rhodopseudomonas palustris DX-1 ATP-dependent metalloprotease FtsH YP_004110651.1 4700485 R 652103 CDS YP_004110652.1 316935670 10066603 complement(4702693..4703343) 1 NC_014834.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: bra:BRADO1224 acetyl-CoA:acetoacetyl-CoA transferase, beta subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 4703343 10066603 Rpdx1_4367 Rhodopseudomonas palustris DX-1 3-oxoacid CoA-transferase subunit B YP_004110652.1 4702693 R 652103 CDS YP_004110653.1 316935671 10066604 complement(4703355..4704071) 1 NC_014834.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: bbt:BBta_6830 acetyl-CoA/acetoacetyl-CoA transferase, alpha subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 4704071 10066604 Rpdx1_4368 Rhodopseudomonas palustris DX-1 3-oxoacid CoA-transferase subunit A YP_004110653.1 4703355 R 652103 CDS YP_004110654.1 316935672 10066605 4704276..4706222 1 NC_014834.1 PFAM: AsmA family protein; KEGG: nha:Nham_1245 AsmA; AsmA family protein 4706222 10066605 Rpdx1_4369 Rhodopseudomonas palustris DX-1 AsmA family protein YP_004110654.1 4704276 D 652103 CDS YP_004110655.1 316935673 10066606 complement(4706281..4707081) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7103 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 4707081 10066606 Rpdx1_4370 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110655.1 4706281 R 652103 CDS YP_004110656.1 316935674 10066607 complement(4707241..4708155) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll7104 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 4708155 10066607 Rpdx1_4371 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110656.1 4707241 R 652103 CDS YP_004110657.1 316935675 10066608 complement(4708152..4709297) 1 NC_014834.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; KEGG: bbt:BBta_6838 putrescine ABC transporter ATP-binding protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 4709297 10066608 Rpdx1_4372 Rhodopseudomonas palustris DX-1 spermidine/putrescine ABC transporter ATPase YP_004110657.1 4708152 R 652103 CDS YP_004110658.1 316935676 10066609 complement(4709398..4710174) 1 NC_014834.1 PFAM: regulatory protein IclR; KEGG: xau:Xaut_1568 transcriptional regulator, TrmB; regulatory protein IclR 4710174 10066609 Rpdx1_4373 Rhodopseudomonas palustris DX-1 regulatory protein IclR YP_004110658.1 4709398 R 652103 CDS YP_004110659.1 316935677 10066610 4710436..4711269 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mka:MK0602 nitrate/sulfonate/bicarbonate ABC transporter permease; binding-protein-dependent transporter inner membrane component 4711269 10066610 Rpdx1_4374 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110659.1 4710436 D 652103 CDS YP_004110660.1 316935678 10066611 4711280..4712134 1 NC_014834.1 KEGG: ckr:CKR_0943 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4712134 10066611 Rpdx1_4375 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110660.1 4711280 D 652103 CDS YP_004110661.1 316935679 10066612 4712138..4713193 1 NC_014834.1 KEGG: mrd:Mrad2831_6160 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; hypothetical protein 4713193 10066612 Rpdx1_4376 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110661.1 4712138 D 652103 CDS YP_004110662.1 316935680 10066613 4713385..4714113 1 NC_014834.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: mms:mma_2479 hypothetical protein; flavin reductase FMN-binding protein 4714113 10066613 Rpdx1_4377 Rhodopseudomonas palustris DX-1 flavin reductase FMN-binding protein YP_004110662.1 4713385 D 652103 CDS YP_004110663.1 316935681 10066614 4714125..4715078 1 NC_014834.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sfu:Sfum_2312 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 4715078 10066614 Rpdx1_4378 Rhodopseudomonas palustris DX-1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004110663.1 4714125 D 652103 CDS YP_004110664.1 316935682 10066615 complement(4715120..4717747) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: bra:BRADO1213 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase 4717747 10066615 Rpdx1_4379 Rhodopseudomonas palustris DX-1 PAS/PAC sensor -containing diguanylate cyclase/phosphodiesterase YP_004110664.1 4715120 R 652103 CDS YP_004110665.1 316935683 10066616 4717965..4719065 1 NC_014834.1 PFAM: FAD dependent oxidoreductase; KEGG: bra:BRADO1212 NAD binding site:FAD dependent oxidoreductase; FAD dependent oxidoreductase 4719065 10066616 Rpdx1_4380 Rhodopseudomonas palustris DX-1 FAD dependent oxidoreductase YP_004110665.1 4717965 D 652103 CDS YP_004110666.1 316935684 10066618 complement(4719721..4719903) 1 NC_014834.1 KEGG: bja:bsl7109 hypothetical protein; hypothetical protein 4719903 10066618 Rpdx1_4382 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110666.1 4719721 R 652103 CDS YP_004110667.1 316935685 10066619 4720233..4720466 1 NC_014834.1 PFAM: protein of unknown function DUF465; KEGG: nwi:Nwi_1003 hypothetical protein; hypothetical protein 4720466 10066619 Rpdx1_4383 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110667.1 4720233 D 652103 CDS YP_004110668.1 316935686 10066620 complement(4720456..4721184) 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: nha:Nham_1237 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 4721184 10066620 Rpdx1_4384 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004110668.1 4720456 R 652103 CDS YP_004110669.1 316935687 10066621 4721338..4721826 1 NC_014834.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: bbt:BBta_6848 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 4721826 10066621 Rpdx1_4385 Rhodopseudomonas palustris DX-1 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_004110669.1 4721338 D 652103 CDS YP_004110670.1 316935688 10066622 4721823..4722923 1 NC_014834.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: bbt:BBta_6849 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit 4722923 10066622 Rpdx1_4386 Rhodopseudomonas palustris DX-1 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_004110670.1 4721823 D 652103 CDS YP_004110671.1 316935689 10066623 4723092..4723355 1 NC_014834.1 KEGG: oca:OCAR_5101 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 4723355 10066623 Rpdx1_4387 Rhodopseudomonas palustris DX-1 30S ribosomal protein S21 YP_004110671.1 4723092 D 652103 CDS YP_004110672.1 316935690 10066624 complement(4723514..4724245) 1 NC_014834.1 KEGG: bja:bll7119 hypothetical protein; hypothetical protein 4724245 10066624 Rpdx1_4388 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110672.1 4723514 R 652103 CDS YP_004110673.1 316935691 10066625 complement(4724392..4724679) 1 NC_014834.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bja:bsl7120 hypothetical protein; cupin 4724679 10066625 Rpdx1_4389 Rhodopseudomonas palustris DX-1 cupin YP_004110673.1 4724392 R 652103 CDS YP_004110674.1 316935692 10066626 4724883..4725257 1 NC_014834.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbt:BBta_3517 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 4725257 10066626 Rpdx1_4390 Rhodopseudomonas palustris DX-1 glyoxalase/bleomycin resistance protein/dioxygenase YP_004110674.1 4724883 D 652103 CDS YP_004110675.1 316935693 10066627 complement(4725440..4726843) 1 NC_014834.1 KEGG: bja:bll7124 NAD(P)+ transhydrogenase beta chain; PFAM: NAD(P) transhydrogenase beta subunit; NAD(P)(+) transhydrogenase 4726843 10066627 Rpdx1_4391 Rhodopseudomonas palustris DX-1 NAD(P)(+) transhydrogenase YP_004110675.1 4725440 R 652103 CDS YP_004110676.1 316935694 10066628 complement(4726857..4727180) 1 NC_014834.1 KEGG: oca:OCAR_5095 NAD(P) transhydrogenase subunit alpha; NAD(P) transhydrogenase subunit alpha 4727180 10066628 Rpdx1_4392 Rhodopseudomonas palustris DX-1 NAD(P) transhydrogenase subunit alpha YP_004110676.1 4726857 R 652103 CDS YP_004110677.1 316935695 10066629 complement(4727206..4728333) 1 NC_014834.1 KEGG: bja:bll7126 NAD(P)+ transhydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; NAD(P)(+) transhydrogenase 4728333 10066629 Rpdx1_4393 Rhodopseudomonas palustris DX-1 NAD(P)(+) transhydrogenase YP_004110677.1 4727206 R 652103 CDS YP_004110678.1 316935696 10066630 complement(4728529..4728681) 1 NC_014834.1 PFAM: aa3 type cytochrome c oxidase subunit IV; KEGG: bja:bsl7127 hypothetical protein; aa3 type cytochrome c oxidase subunit IV 4728681 10066630 Rpdx1_4394 Rhodopseudomonas palustris DX-1 aa3 type cytochrome c oxidase subunit IV YP_004110678.1 4728529 R 652103 CDS YP_004110679.1 316935697 10066631 complement(4728967..4729350) 1 NC_014834.1 KEGG: bbt:BBta_6860 putative death on curing protein; TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; death-on-curing family protein 4729350 10066631 Rpdx1_4395 Rhodopseudomonas palustris DX-1 death-on-curing family protein YP_004110679.1 4728967 R 652103 CDS YP_004110680.1 316935698 10066632 complement(4729347..4729616) 1 NC_014834.1 TIGRFAM: addiction module antidote; KEGG: bbt:BBta_6861 transcriptional regulator/antitoxin, MazE; addiction module antidote protein 4729616 10066632 Rpdx1_4396 Rhodopseudomonas palustris DX-1 addiction module antidote protein YP_004110680.1 4729347 R 652103 CDS YP_004110681.1 316935699 10066633 complement(4729699..4731618) 1 NC_014834.1 KEGG: bbt:BBta_6862 putative oligoendopeptidase F; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; oligoendopeptidase 4731618 10066633 Rpdx1_4397 Rhodopseudomonas palustris DX-1 oligoendopeptidase YP_004110681.1 4729699 R 652103 CDS YP_004110682.1 316935700 10066634 4731990..4732625 1 NC_014834.1 PFAM: Integral membrane protein TerC; KEGG: azl:AZL_d01240 TerC-like integral membrane protein; integral membrane protein TerC 4732625 10066634 Rpdx1_4398 Rhodopseudomonas palustris DX-1 integral membrane protein TerC YP_004110682.1 4731990 D 652103 CDS YP_004110683.1 316935701 10066635 4732721..4734208 1 NC_014834.1 KEGG: nha:Nham_1224 two component, sigma54 specific, fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; Fis family two component sigma54 specific transcriptional regulator 4734208 10066635 Rpdx1_4399 Rhodopseudomonas palustris DX-1 Fis family two component sigma54 specific transcriptional regulator YP_004110683.1 4732721 D 652103 CDS YP_004110684.1 316935702 10066636 4734564..4736795 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: bja:blr7131 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 4736795 10066636 Rpdx1_4400 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004110684.1 4734564 D 652103 CDS YP_004110685.1 316935703 10066637 4737132..4738739 1 NC_014834.1 PFAM: protein of unknown function DUF882; KEGG: nha:Nham_1222 hypothetical protein; hypothetical protein 4738739 10066637 Rpdx1_4401 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110685.1 4737132 D 652103 CDS YP_004110686.1 316935704 10066638 complement(4738875..4739147) 1 NC_014834.1 PFAM: Protein of unknown function DUF2312; KEGG: nha:Nham_1221 hypothetical protein; hypothetical protein 4739147 10066638 Rpdx1_4402 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110686.1 4738875 R 652103 CDS YP_004110687.1 316935705 10066639 complement(4739336..4739635) 1 NC_014834.1 PFAM: protein of unknown function DUF1244; KEGG: bja:bll7136 hypothetical protein; hypothetical protein 4739635 10066639 Rpdx1_4403 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110687.1 4739336 R 652103 CDS YP_004110688.1 316935706 10066640 4739828..4740424 1 NC_014834.1 PFAM: protein of unknown function DUF1036; KEGG: bra:BRADO1186 putative signal peptide; hypothetical protein 4740424 10066640 Rpdx1_4404 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110688.1 4739828 D 652103 CDS YP_004110689.1 316935707 10066641 4740421..4741854 1 NC_014834.1 TIGRFAM: pyruvate kinase; KEGG: bra:BRADO1185 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 4741854 10066641 Rpdx1_4405 Rhodopseudomonas palustris DX-1 pyruvate kinase YP_004110689.1 4740421 D 652103 CDS YP_004110690.1 316935708 10066642 complement(4741864..4742322) 1 NC_014834.1 PFAM: protein of unknown function UPF0150; KEGG: bgr:Bgr_03670 putative transcriptional regulator; hypothetical protein 4742322 10066642 Rpdx1_4406 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110690.1 4741864 R 652103 CDS YP_004110691.1 316935709 10066643 complement(4742324..4742422) 1 NC_014834.1 hypothetical protein 4742422 10066643 Rpdx1_4407 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110691.1 4742324 R 652103 CDS YP_004110692.1 316935710 10066644 complement(4742398..4742523) 1 NC_014834.1 hypothetical protein 4742523 10066644 Rpdx1_4408 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110692.1 4742398 R 652103 CDS YP_004110693.1 316935711 10066645 complement(4742716..4743144) 1 NC_014834.1 TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: azc:AZC_1807 OsmC-like protein; PFAM: OsmC family protein; peroxiredoxin 4743144 10066645 Rpdx1_4409 Rhodopseudomonas palustris DX-1 peroxiredoxin YP_004110693.1 4742716 R 652103 CDS YP_004110694.1 316935712 10066646 complement(4743268..4743930) 1 NC_014834.1 PFAM: TPR repeat-containing protein; KEGG: bbt:BBta_1657 hypothetical protein; hypothetical protein 4743930 10066646 Rpdx1_4410 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110694.1 4743268 R 652103 CDS YP_004110695.1 316935713 10066647 complement(4744027..4744152) 1 NC_014834.1 TIGRFAM: ribosomal protein L36; KEGG: nha:Nham_1214 50S ribosomal protein L36; 50S ribosomal protein L36 4744152 10066647 Rpdx1_4411 Rhodopseudomonas palustris DX-1 50S ribosomal protein L36 YP_004110695.1 4744027 R 652103 CDS YP_004110696.1 316935714 10066648 4744471..4745340 1 NC_014834.1 PFAM: amidohydrolase 2; KEGG: bja:blr7549 hypothetical protein; amidohydrolase 2 4745340 10066648 Rpdx1_4412 Rhodopseudomonas palustris DX-1 amidohydrolase 2 YP_004110696.1 4744471 D 652103 CDS YP_004110697.1 316935715 10066649 4745610..4746350 1 NC_014834.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: bbt:BBta_1654 2-haloacid dehalogenase; PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase 4746350 10066649 Rpdx1_4413 Rhodopseudomonas palustris DX-1 haloacid dehalogenase YP_004110697.1 4745610 D 652103 CDS YP_004110698.1 316935716 10066650 4746426..4746893 1 NC_014834.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bbt:BBta_1653 putative YbaK-like protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 4746893 10066650 Rpdx1_4414 Rhodopseudomonas palustris DX-1 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_004110698.1 4746426 D 652103 CDS YP_004110699.1 316935717 10066651 4747127..4747648 1 NC_014834.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pde:Pden_3538 TRAP dicarboxylate family transporter DctQ subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 4747648 10066651 Rpdx1_4415 Rhodopseudomonas palustris DX-1 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004110699.1 4747127 D 652103 CDS YP_004110700.1 316935718 10066652 4747680..4748987 1 NC_014834.1 KEGG: bpt:Bpet1218 TrapT family protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM 4748987 10066652 Rpdx1_4416 Rhodopseudomonas palustris DX-1 TRAP dicarboxylate transporter subunit DctM YP_004110700.1 4747680 D 652103 CDS YP_004110701.1 316935719 10066653 4749055..4750185 1 NC_014834.1 PFAM: Extracellular solute-binding protein, family 7; KEGG: bpt:Bpet1219 hypothetical protein; family 7 extracellular solute-binding protein 4750185 10066653 Rpdx1_4417 Rhodopseudomonas palustris DX-1 family 7 extracellular solute-binding protein YP_004110701.1 4749055 D 652103 CDS YP_004110702.1 316935720 10066654 complement(4750281..4750586) 1 NC_014834.1 KEGG: bja:bsl2782 hypothetical protein; hypothetical protein 4750586 10066654 Rpdx1_4418 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110702.1 4750281 R 652103 CDS YP_004110703.1 316935721 10066655 complement(4750739..4752064) 1 NC_014834.1 KEGG: azl:AZL_007500 methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4752064 10066655 Rpdx1_4419 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004110703.1 4750739 R 652103 CDS YP_004110704.1 316935722 10066656 complement(4752039..4752560) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: azl:AZL_007490 chemotaxis sensory transducer; SMART: PAS domain containing protein; PAS sensor protein 4752560 10066656 Rpdx1_4420 Rhodopseudomonas palustris DX-1 PAS sensor protein YP_004110704.1 4752039 R 652103 CDS YP_004110705.1 316935723 10066657 complement(4752789..4753001) 1 NC_014834.1 KEGG: bfo:BRAFLDRAFT_126631 hypothetical protein; hypothetical protein 4753001 10066657 Rpdx1_4421 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110705.1 4752789 R 652103 CDS YP_004110706.1 316935724 10066658 4753207..4754571 1 NC_014834.1 PFAM: virulence factor MVIN family protein; polysaccharide biosynthesis protein; KEGG: nha:Nham_3553 polysaccharide biosynthesis protein; virulence factor MVIN family protein 4754571 10066658 Rpdx1_4422 Rhodopseudomonas palustris DX-1 virulence factor MVIN family protein YP_004110706.1 4753207 D 652103 CDS YP_004110707.1 316935725 10066659 complement(4754692..4755480) 1 NC_014834.1 KEGG: nha:Nham_3554 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; 3-hydroxybutyrate dehydrogenase 4755480 10066659 Rpdx1_4423 Rhodopseudomonas palustris DX-1 3-hydroxybutyrate dehydrogenase YP_004110707.1 4754692 R 652103 CDS YP_004110708.1 316935726 10066660 complement(4755529..4756668) 1 NC_014834.1 PFAM: Patatin; KEGG: nha:Nham_3555 patatin; patatin 4756668 10066660 Rpdx1_4424 Rhodopseudomonas palustris DX-1 patatin YP_004110708.1 4755529 R 652103 CDS YP_004110709.1 316935727 10066661 complement(4756764..4757276) 1 NC_014834.1 PFAM: SCP-like extracellular; KEGG: bja:blr1486 hypothetical protein; hypothetical protein 4757276 10066661 Rpdx1_4425 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110709.1 4756764 R 652103 CDS YP_004110710.1 316935728 10066662 complement(4757463..4758500) 1 NC_014834.1 KEGG: met:M446_4572 glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamate--ammonia ligase 4758500 10066662 Rpdx1_4426 Rhodopseudomonas palustris DX-1 glutamate--ammonia ligase YP_004110710.1 4757463 R 652103 CDS YP_004110711.1 316935729 10066663 4758994..4759176 1 NC_014834.1 KEGG: bja:bsl4167 putative glutamine synthetase translation inhibitor; putative glutamine synthetase translation inhibitor 4759176 10066663 Rpdx1_4427 Rhodopseudomonas palustris DX-1 putative glutamine synthetase translation inhibitor YP_004110711.1 4758994 D 652103 CDS YP_004110712.1 316935730 10066664 complement(4759284..4760219) 1 NC_014834.1 TIGRFAM: Glutaminase, core; KEGG: mno:Mnod_4504 glutaminase, core; PFAM: Glutaminase, core; glutaminase 4760219 10066664 Rpdx1_4428 Rhodopseudomonas palustris DX-1 glutaminase YP_004110712.1 4759284 R 652103 CDS YP_004110713.1 316935731 10066665 complement(4760745..4761254) 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: bra:BRADO1068 hypothetical protein; hypothetical protein 4761254 10066665 Rpdx1_4429 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110713.1 4760745 R 652103 CDS YP_004110714.1 316935732 10066666 complement(4761241..4762896) 1 NC_014834.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: bja:blr1479 ferredoxin-nitrite reductase; nitrite and sulfite reductase 4Fe-4S region 4762896 10066666 Rpdx1_4430 Rhodopseudomonas palustris DX-1 nitrite and sulfite reductase 4Fe-4S region YP_004110714.1 4761241 R 652103 CDS YP_004110715.1 316935733 10066667 complement(4762907..4763221) 1 NC_014834.1 KEGG: bra:BRADO1066 hypothetical protein; hypothetical protein 4763221 10066667 Rpdx1_4431 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110715.1 4762907 R 652103 CDS YP_004110716.1 316935734 10066668 complement(4763218..4764654) 1 NC_014834.1 KEGG: bbt:BBta_6982 uroporphyrinogen-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain; uroporphyrin-III C-methyltransferase 4764654 10066668 Rpdx1_4432 Rhodopseudomonas palustris DX-1 uroporphyrin-III C-methyltransferase YP_004110716.1 4763218 R 652103 CDS YP_004110717.1 316935735 10066669 4764966..4765973 1 NC_014834.1 KEGG: oan:Oant_1854 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter substrate-binding protein 4765973 10066669 Rpdx1_4433 Rhodopseudomonas palustris DX-1 sulfate ABC transporter substrate-binding protein YP_004110717.1 4764966 D 652103 CDS YP_004110718.1 316935736 10066670 4766319..4767146 1 NC_014834.1 KEGG: azc:AZC_3733 sulfate ABC transporter permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 4767146 10066670 Rpdx1_4434 Rhodopseudomonas palustris DX-1 sulfate ABC transporter permease YP_004110718.1 4766319 D 652103 CDS YP_004110719.1 316935737 10066671 4767143..4768012 1 NC_014834.1 KEGG: azc:AZC_3734 sulfate ABC transporter permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 4768012 10066671 Rpdx1_4435 Rhodopseudomonas palustris DX-1 sulfate ABC transporter permease YP_004110719.1 4767143 D 652103 CDS YP_004110720.1 316935738 10066672 4768245..4770419 1 NC_014834.1 TIGRFAM: malate synthase G; KEGG: bra:BRADO1059 malate synthase G; PFAM: Malate synthase family protein; malate synthase G 4770419 10066672 Rpdx1_4436 Rhodopseudomonas palustris DX-1 malate synthase G YP_004110720.1 4768245 D 652103 CDS YP_004110721.1 316935739 10066673 4770612..4770812 1 NC_014834.1 PFAM: CsbD family protein; KEGG: ret:RHE_CH01802 hypothetical protein; CsbD family protein 4770812 10066673 Rpdx1_4437 Rhodopseudomonas palustris DX-1 CsbD family protein YP_004110721.1 4770612 D 652103 CDS YP_004110722.1 316935740 10066674 complement(4771256..4771417) 1 NC_014834.1 KEGG: bja:bsr1472 hypothetical protein; hypothetical protein 4771417 10066674 Rpdx1_4438 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110722.1 4771256 R 652103 CDS YP_004110723.1 316935741 10066675 complement(4771572..4772240) 1 NC_014834.1 KEGG: bra:BRADO1056 putative signal peptide; hypothetical protein 4772240 10066675 Rpdx1_4439 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110723.1 4771572 R 652103 CDS YP_004110724.1 316935742 10066676 complement(4772264..4773040) 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bja:blr1468 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 4773040 10066676 Rpdx1_4440 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004110724.1 4772264 R 652103 CDS YP_004110725.1 316935743 10066677 4773236..4774339 1 NC_014834.1 PFAM: protein of unknown function UPF0118; KEGG: bja:bll1467 hypothetical protein; hypothetical protein 4774339 10066677 Rpdx1_4441 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110725.1 4773236 D 652103 CDS YP_004110726.1 316935744 10066678 complement(4774428..4774814) 1 NC_014834.1 KEGG: bja:bll7790 hypothetical protein; hypothetical protein 4774814 10066678 Rpdx1_4442 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110726.1 4774428 R 652103 CDS YP_004110727.1 316935745 10066679 complement(4775198..4776004) 1 NC_014834.1 KEGG: bja:bll7795 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver 4776004 10066679 Rpdx1_4443 Rhodopseudomonas palustris DX-1 response regulator receiver YP_004110727.1 4775198 R 652103 CDS YP_004110728.1 316935746 10066680 4776209..4776448 1 NC_014834.1 KEGG: bra:BRADO1048 hypothetical protein; hypothetical protein 4776448 10066680 Rpdx1_4444 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110728.1 4776209 D 652103 CDS YP_004110729.1 316935747 10066681 4776448..4776993 1 NC_014834.1 KEGG: bja:blr7797 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 4776993 10066681 Rpdx1_4445 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004110729.1 4776448 D 652103 CDS YP_004110730.1 316935748 10066682 complement(4777153..4778817) 1 NC_014834.1 PFAM: HWE histidine kinase; KEGG: bbt:BBta_7004 signal transduction histidine kinase; signal transduction histidine kinase 4778817 10066682 Rpdx1_4446 Rhodopseudomonas palustris DX-1 signal transduction histidine kinase YP_004110730.1 4777153 R 652103 CDS YP_004110731.1 316935749 10066683 complement(4779071..4779700) 1 NC_014834.1 KEGG: bra:BRADO1045 urease accessory protein UreG; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; urease accessory protein UreG 4779700 10066683 Rpdx1_4447 Rhodopseudomonas palustris DX-1 urease accessory protein UreG YP_004110731.1 4779071 R 652103 CDS YP_004110732.1 316935750 10066684 4780106..4780456 1 NC_014834.1 KEGG: pvx:PVX_097685 merozoite surface protein 3 (MSP3); hypothetical protein 4780456 10066684 Rpdx1_4448 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110732.1 4780106 D 652103 CDS YP_004110733.1 316935751 10066685 4780923..4781207 1 NC_014834.1 KEGG: oca:OCAR_5016 hypothetical protein; hypothetical protein 4781207 10066685 Rpdx1_4449 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110733.1 4780923 D 652103 CDS YP_004110734.1 316935752 10066686 complement(4781278..4783389) 1 NC_014834.1 KEGG: bbt:BBta_5740 putative dimethyl sulfoxide reductase(DMSO reductase); PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; nitrate reductase 4783389 10066686 Rpdx1_4450 Rhodopseudomonas palustris DX-1 nitrate reductase YP_004110734.1 4781278 R 652103 CDS YP_004110735.1 316935753 10066687 4783541..4783867 1 NC_014834.1 manually curated; KEGG: bja:blr7579 hypothetical protein; hypothetical protein 4783867 10066687 Rpdx1_4451 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110735.1 4783541 D 652103 CDS YP_004110736.1 316935754 10066688 complement(4783918..4784637) 1 NC_014834.1 KEGG: bja:bll6061 transcriptional regulatory protein; PFAM: regulatory protein Crp; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; Crp/Fnr family transcriptional regulator 4784637 10066688 Rpdx1_4452 Rhodopseudomonas palustris DX-1 Crp/Fnr family transcriptional regulator YP_004110736.1 4783918 R 652103 CDS YP_004110737.1 316935755 10066689 4784832..4785149 1 NC_014834.1 KEGG: bra:BRADO5301 putative cytochrome c; putative cytochrome c 4785149 10066689 Rpdx1_4453 Rhodopseudomonas palustris DX-1 putative cytochrome c YP_004110737.1 4784832 D 652103 CDS YP_004110738.1 316935756 10066690 complement(4785109..4786308) 1 NC_014834.1 PFAM: Mammalian cell entry related domain protein; protein of unknown function DUF330; KEGG: nha:Nham_1923 hypothetical protein; mammalian cell entry related domain-containing protein 4786308 10066690 Rpdx1_4454 Rhodopseudomonas palustris DX-1 mammalian cell entry related domain-containing protein YP_004110738.1 4785109 R 652103 CDS YP_004110739.1 316935757 10066691 complement(4786320..4787099) 1 NC_014834.1 KEGG: bja:bll6064 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4787099 10066691 Rpdx1_4455 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110739.1 4786320 R 652103 CDS YP_004110740.1 316935758 10066692 complement(4787102..4788250) 1 NC_014834.1 PFAM: protein of unknown function DUF140; KEGG: nha:Nham_1921 hypothetical protein; hypothetical protein 4788250 10066692 Rpdx1_4456 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110740.1 4787102 R 652103 CDS YP_004110741.1 316935759 10066693 4788401..4788811 1 NC_014834.1 KEGG: nha:Nham_1920 hypothetical protein; hypothetical protein 4788811 10066693 Rpdx1_4457 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110741.1 4788401 D 652103 CDS YP_004110742.1 316935760 10066694 complement(4789057..4789899) 1 NC_014834.1 KEGG: gsu:GSU1300 methyl-accepting chemotaxis protein; hypothetical protein 4789899 10066694 Rpdx1_4458 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110742.1 4789057 R 652103 CDS YP_004110743.1 316935761 10066695 complement(4790241..4792964) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: bja:bll6068 hypothetical protein; N-acetyltransferase GCN5 4792964 10066695 Rpdx1_4459 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004110743.1 4790241 R 652103 CDS YP_004110744.1 316935762 10066696 complement(4793102..4793530) 1 NC_014834.1 KEGG: bra:BRADO2437 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; hypothetical protein 4793530 10066696 Rpdx1_4460 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110744.1 4793102 R 652103 CDS YP_004110745.1 316935763 10066697 4793787..4795349 1 NC_014834.1 KEGG: nha:Nham_1915 hypothetical protein; hypothetical protein 4795349 10066697 Rpdx1_4461 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110745.1 4793787 D 652103 CDS YP_004110746.1 316935764 10066698 complement(4795331..4797094) 1 NC_014834.1 PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: bja:bll6073 poly-beta-hydroxybutyrate polymerase; poly-beta-hydroxybutyrate polymerase domain-containing protein 4797094 10066698 Rpdx1_4462 Rhodopseudomonas palustris DX-1 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_004110746.1 4795331 R 652103 CDS YP_004110747.1 316935765 10066699 complement(4797366..4798202) 1 NC_014834.1 PFAM: UspA domain protein; KEGG: nha:Nham_1913 hypothetical protein; UspA domain-containing protein 4798202 10066699 Rpdx1_4463 Rhodopseudomonas palustris DX-1 UspA domain-containing protein YP_004110747.1 4797366 R 652103 CDS YP_004110748.1 316935766 10066700 4798414..4799247 1 NC_014834.1 PFAM: UspA domain protein; KEGG: bja:bll2590 hypothetical protein; UspA domain-containing protein 4799247 10066700 Rpdx1_4464 Rhodopseudomonas palustris DX-1 UspA domain-containing protein YP_004110748.1 4798414 D 652103 CDS YP_004110749.1 316935767 10066701 4799336..4800067 1 NC_014834.1 KEGG: bra:BRADO5312 hypothetical protein; PFAM: CBS domain containing protein; transport-associated; SMART: CBS domain containing protein; putative signal transduction protein 4800067 10066701 Rpdx1_4465 Rhodopseudomonas palustris DX-1 putative signal transduction protein YP_004110749.1 4799336 D 652103 CDS YP_004110750.1 316935768 10066702 4800215..4801741 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; KEGG: oca:OCAR_7132 sensor protein FixL; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4801741 10066702 Rpdx1_4466 Rhodopseudomonas palustris DX-1 PAS/PAC sensor signal transduction histidine kinase YP_004110750.1 4800215 D 652103 CDS YP_004110751.1 316935769 10066703 4801734..4802345 1 NC_014834.1 KEGG: bra:BRADO2434 response regulator FixJ; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; LuxR family two component transcriptional regulator 4802345 10066703 Rpdx1_4467 Rhodopseudomonas palustris DX-1 LuxR family two component transcriptional regulator YP_004110751.1 4801734 D 652103 CDS YP_004110752.1 316935770 10066704 4802430..4802822 1 NC_014834.1 KEGG: bja:bll2758 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 4802822 10066704 Rpdx1_4468 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004110752.1 4802430 D 652103 CDS YP_004110753.1 316935771 10066705 4803009..4803698 1 NC_014834.1 KEGG: bja:bll2757 transcriptional regulator FixK; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 4803698 10066705 Rpdx1_4469 Rhodopseudomonas palustris DX-1 Crp/Fnr family transcriptional regulator YP_004110753.1 4803009 D 652103 CDS YP_004110754.1 316935772 10066706 4804021..4805328 1 NC_014834.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: avi:Avi_5163 O-acetylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 4805328 10066706 Rpdx1_4470 Rhodopseudomonas palustris DX-1 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_004110754.1 4804021 D 652103 CDS YP_004110755.1 316935773 10066707 complement(4805437..4806801) 1 NC_014834.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rsh:Rsph17029_1748 NADH dehydrogenase (quinone); NADH/ubiquinone/plastoquinone 4806801 10066707 Rpdx1_4471 Rhodopseudomonas palustris DX-1 NADH/ubiquinone/plastoquinone YP_004110755.1 4805437 R 652103 CDS YP_004110756.1 316935774 10066708 complement(4806812..4808254) 1 NC_014834.1 KEGG: rsq:Rsph17025_1700 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 4808254 10066708 Rpdx1_4472 Rhodopseudomonas palustris DX-1 proton-translocating NADH-quinone oxidoreductase subunit M YP_004110756.1 4806812 R 652103 CDS YP_004110757.1 316935775 10066709 complement(4808245..4810314) 1 NC_014834.1 KEGG: rsq:Rsph17025_1699 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 4810314 10066709 Rpdx1_4473 Rhodopseudomonas palustris DX-1 proton-translocating NADH-quinone oxidoreductase subunit L YP_004110757.1 4808245 R 652103 CDS YP_004110758.1 316935776 10066710 complement(4810317..4810625) 1 NC_014834.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rsk:RSKD131_1426 NADH-ubiquinone oxidoreductase, chain 4L precursor; NADH-ubiquinone oxidoreductase subunit 4L 4810625 10066710 Rpdx1_4474 Rhodopseudomonas palustris DX-1 NADH-ubiquinone oxidoreductase subunit 4L YP_004110758.1 4810317 R 652103 CDS YP_004110759.1 316935777 10066711 complement(4810622..4811128) 1 NC_014834.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: rsp:RSP_0108 NADH dehydrogenase I chain J; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 4811128 10066711 Rpdx1_4475 Rhodopseudomonas palustris DX-1 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 YP_004110759.1 4810622 R 652103 CDS YP_004110760.1 316935778 10066712 complement(4811125..4811646) 1 NC_014834.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: eca:ECA3021 NADH dehydrogenase subunit I; NADH-quinone oxidoreductase subunit I 4811646 10066712 Rpdx1_4476 Rhodopseudomonas palustris DX-1 NADH-quinone oxidoreductase subunit I YP_004110760.1 4811125 R 652103 CDS YP_004110761.1 316935779 10066713 complement(4811643..4812602) 1 NC_014834.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rsp:RSP_0106 putative NADH dehydrogenase I chain H; respiratory-chain NADH dehydrogenase subunit 1 4812602 10066713 Rpdx1_4477 Rhodopseudomonas palustris DX-1 respiratory-chain NADH dehydrogenase subunit 1 YP_004110761.1 4811643 R 652103 CDS YP_004110762.1 316935780 10066714 complement(4812599..4815232) 1 NC_014834.1 KEGG: rsq:Rsph17025_1694 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; NADH-quinone oxidoreductase subunit G 4815232 10066714 Rpdx1_4478 Rhodopseudomonas palustris DX-1 NADH-quinone oxidoreductase subunit G YP_004110762.1 4812599 R 652103 CDS YP_004110763.1 316935781 10066715 complement(4815229..4816515) 1 NC_014834.1 KEGG: rsh:Rsph17029_1740 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH dehydrogenase (quinone) 4816515 10066715 Rpdx1_4479 Rhodopseudomonas palustris DX-1 NADH dehydrogenase (quinone) YP_004110763.1 4815229 R 652103 CDS YP_004110764.1 316935782 10066716 complement(4816512..4817000) 1 NC_014834.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rsq:Rsph17025_1692 NADH dehydrogenase subunit E; NADH dehydrogenase (ubiquinone) 24 kDa subunit 4817000 10066716 Rpdx1_4480 Rhodopseudomonas palustris DX-1 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_004110764.1 4816512 R 652103 CDS YP_004110765.1 316935783 10066717 complement(4816997..4818742) 1 NC_014834.1 KEGG: rsk:RSKD131_1418 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase I subunit D 4818742 10066717 Rpdx1_4481 Rhodopseudomonas palustris DX-1 NADH dehydrogenase I subunit D YP_004110765.1 4816997 R 652103 CDS YP_004110766.1 316935784 10066718 complement(4818739..4819365) 1 NC_014834.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: rsq:Rsph17025_1690 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 4819365 10066718 Rpdx1_4482 Rhodopseudomonas palustris DX-1 NADH-quinone oxidoreductase subunit B YP_004110766.1 4818739 R 652103 CDS YP_004110767.1 316935785 10066719 complement(4819362..4819751) 1 NC_014834.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: pap:PSPA7_2570 NADH dehydrogenase subunit A; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 4819751 10066719 Rpdx1_4483 Rhodopseudomonas palustris DX-1 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 YP_004110767.1 4819362 R 652103 CDS YP_004110768.1 316935786 10066720 4820215..4822014 1 NC_014834.1 KEGG: nha:Nham_3736 cyclic beta-1,2-glucan ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter-like protein 4822014 10066720 Rpdx1_4484 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110768.1 4820215 D 652103 CDS YP_004110769.1 316935787 10066721 4822185..4823636 1 NC_014834.1 KEGG: bja:bll1320 penicillin-binding protein; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; serine-type D-Ala-D-Ala carboxypeptidase 4823636 10066721 Rpdx1_4485 Rhodopseudomonas palustris DX-1 serine-type D-Ala-D-Ala carboxypeptidase YP_004110769.1 4822185 D 652103 CDS YP_004110770.1 316935788 10066722 4823912..4825603 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO6584 acyl-CoA synthetase; AMP-dependent synthetase and ligase 4825603 10066722 Rpdx1_4486 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110770.1 4823912 D 652103 CDS YP_004110771.1 316935789 10066723 4825859..4826344 1 NC_014834.1 PFAM: Redoxin domain protein; KEGG: bja:bll1317 peroxiredoxin; redoxin domain-containing protein 4826344 10066723 Rpdx1_4487 Rhodopseudomonas palustris DX-1 redoxin domain-containing protein YP_004110771.1 4825859 D 652103 CDS YP_004110772.1 316935790 10066724 complement(4826555..4827010) 1 NC_014834.1 KEGG: bja:blr1316 ribonuclease H; PFAM: ribonuclease H; Ribonuclease H 4827010 10066724 Rpdx1_4488 Rhodopseudomonas palustris DX-1 Ribonuclease H YP_004110772.1 4826555 R 652103 CDS YP_004110773.1 316935791 10066725 complement(4827007..4827990) 1 NC_014834.1 TIGRFAM: homoserine kinase; KEGG: bja:blr1315 homoserine kinase; PFAM: aminoglycoside phosphotransferase; homoserine kinase 4827990 10066725 Rpdx1_4489 Rhodopseudomonas palustris DX-1 homoserine kinase YP_004110773.1 4827007 R 652103 CDS YP_004110774.1 316935792 10066726 complement(4828093..4829055) 1 NC_014834.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: nha:Nham_3745 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase 4829055 10066726 Rpdx1_4490 Rhodopseudomonas palustris DX-1 hydroxymethylbutenyl pyrophosphate reductase YP_004110774.1 4828093 R 652103 CDS YP_004110775.1 316935793 10066727 4829316..4830032 1 NC_014834.1 PFAM: protein of unknown function DUF1013; KEGG: nha:Nham_3746 hypothetical protein; hypothetical protein 4830032 10066727 Rpdx1_4491 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110775.1 4829316 D 652103 CDS YP_004110776.1 316935794 10066728 complement(4830212..4830589) 1 NC_014834.1 KEGG: dpe:Dper_GL17156 GL17156 gene product from transcript GL17156-RA; hypothetical protein 4830589 10066728 Rpdx1_4492 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110776.1 4830212 R 652103 CDS YP_004110777.1 316935795 10066729 4831126..4833738 1 NC_014834.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mma:MM_2421 chaperone protein; ATP-binding protein 4833738 10066729 Rpdx1_4493 Rhodopseudomonas palustris DX-1 ATP-binding protein YP_004110777.1 4831126 D 652103 CDS YP_004110778.1 316935796 10066730 4834248..4834541 1 NC_014834.1 TIGRFAM: prevent-host-death family protein; KEGG: msl:Msil_1401 prevent-host-death family protein; prevent-host-death family protein 4834541 10066730 Rpdx1_4494 Rhodopseudomonas palustris DX-1 prevent-host-death family protein YP_004110778.1 4834248 D 652103 CDS YP_004110779.1 316935797 10066731 4834538..4834960 1 NC_014834.1 PFAM: PilT protein domain protein; KEGG: msl:Msil_1400 PilT protein domain protein; PilT domain-containing protein 4834960 10066731 Rpdx1_4495 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004110779.1 4834538 D 652103 CDS YP_004110780.1 316935798 10066732 4835182..4835478 1 NC_014834.1 manually curated; KEGG: bpf:BpOF4_00490 hypothetical protein; hypothetical protein 4835478 10066732 Rpdx1_4496 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110780.1 4835182 D 652103 CDS YP_004110781.1 316935799 10066733 4835661..4836134 1 NC_014834.1 PFAM: BLUF domain protein; KEGG: mch:Mchl_4401 BLUF domain protein; BLUF domain-containing protein 4836134 10066733 Rpdx1_4497 Rhodopseudomonas palustris DX-1 BLUF domain-containing protein YP_004110781.1 4835661 D 652103 CDS YP_004110782.1 316935800 10066734 complement(4836147..4837052) 1 NC_014834.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: msl:Msil_3204 transcriptional regulator, LysR family; LysR family transcriptional regulator 4837052 10066734 Rpdx1_4498 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004110782.1 4836147 R 652103 CDS YP_004110783.1 316935801 10066735 4837145..4837786 1 NC_014834.1 PFAM: YceI family protein; KEGG: mrd:Mrad2831_5253 YceI family protein; hypothetical protein 4837786 10066735 Rpdx1_4499 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110783.1 4837145 D 652103 CDS YP_004110784.1 316935802 10066736 4837860..4838450 1 NC_014834.1 PFAM: nitroreductase; KEGG: cvi:CV_1813 hypothetical protein; nitroreductase 4838450 10066736 Rpdx1_4500 Rhodopseudomonas palustris DX-1 nitroreductase YP_004110784.1 4837860 D 652103 CDS YP_004110785.1 316935803 10066738 complement(4839102..4839737) 1 NC_014834.1 PFAM: Methyltransferase type 11; KEGG: lch:Lcho_1387 methyltransferase type 11; type 11 methyltransferase 4839737 10066738 Rpdx1_4502 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004110785.1 4839102 R 652103 CDS YP_004110786.1 316935804 10066739 4839871..4840638 1 NC_014834.1 KEGG: psb:Psyr_0778 type III effector HopAG1; type III effector HopAG1 4840638 10066739 Rpdx1_4503 Rhodopseudomonas palustris DX-1 type III effector HopAG1 YP_004110786.1 4839871 D 652103 CDS YP_004110787.1 316935805 10066740 4840638..4841195 1 NC_014834.1 KEGG: alv:Alvin_0881 dual specificity protein phosphatase; dual specificity protein phosphatase 4841195 10066740 Rpdx1_4504 Rhodopseudomonas palustris DX-1 dual specificity protein phosphatase YP_004110787.1 4840638 D 652103 CDS YP_004110788.1 316935806 10066741 4841329..4841775 1 NC_014834.1 PFAM: Phosphate-starvation-inducible E-like; KEGG: apb:SAR116_0955 phosphate-starvation-inducible E; phosphate-starvation-inducible E-like protein 4841775 10066741 Rpdx1_4505 Rhodopseudomonas palustris DX-1 phosphate-starvation-inducible E-like protein YP_004110788.1 4841329 D 652103 CDS YP_004110789.1 316935807 10066742 4842113..4842268 1 NC_014834.1 PFAM: antenna complex alpha/beta subunit; KEGG: bbt:BBta_3081 light harvesting protein B-800-850; antenna complex subunit alpha/beta 4842268 10066742 Rpdx1_4506 Rhodopseudomonas palustris DX-1 antenna complex subunit alpha/beta YP_004110789.1 4842113 D 652103 CDS YP_004110790.1 316935808 10066743 4842281..4842484 1 NC_014834.1 PFAM: antenna complex alpha/beta subunit; KEGG: pucA; light-harvesting protein B-800/850 subunit alpha; antenna complex subunit alpha/beta 4842484 10066743 Rpdx1_4507 Rhodopseudomonas palustris DX-1 antenna complex subunit alpha/beta YP_004110790.1 4842281 D 652103 CDS YP_004110791.1 316935809 10066744 4842813..4843031 1 NC_014834.1 KEGG: nha:Nham_1125 hypothetical protein; hypothetical protein 4843031 10066744 Rpdx1_4508 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110791.1 4842813 D 652103 CDS YP_004110792.1 316935810 10066745 complement(4843682..4845286) 1 NC_014834.1 KEGG: bbt:BBta_1851 hypothetical protein; hypothetical protein 4845286 10066745 Rpdx1_4509 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110792.1 4843682 R 652103 CDS YP_004110793.1 316935811 10066746 complement(4845324..4846616) 1 NC_014834.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: bja:bll7052 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; adenylosuccinate synthetase 4846616 10066746 Rpdx1_4510 Rhodopseudomonas palustris DX-1 adenylosuccinate synthetase YP_004110793.1 4845324 R 652103 CDS YP_004110794.1 316935812 10066747 complement(4846910..4847221) 1 NC_014834.1 PFAM: type IV pilus assembly PilZ; KEGG: nwi:Nwi_0398 hypothetical protein; type IV pilus assembly PilZ 4847221 10066747 Rpdx1_4511 Rhodopseudomonas palustris DX-1 type IV pilus assembly PilZ YP_004110794.1 4846910 R 652103 CDS YP_004110795.1 316935813 10066748 4847613..4848437 1 NC_014834.1 PFAM: aldo/keto reductase; KEGG: bbt:BBta_2445 2,5-diketo-D-gluconate reductase B; aldo/keto reductase 4848437 10066748 Rpdx1_4512 Rhodopseudomonas palustris DX-1 aldo/keto reductase YP_004110795.1 4847613 D 652103 CDS YP_004110796.1 316935814 10066749 4848882..4849358 1 NC_014834.1 KEGG: nha:Nham_1120 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; ybaK/ebsC protein 4849358 10066749 Rpdx1_4513 Rhodopseudomonas palustris DX-1 ybaK/ebsC protein YP_004110796.1 4848882 D 652103 CDS YP_004110797.1 316935815 10066750 4849516..4850445 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bja:blr7055 transport protein; hypothetical protein 4850445 10066750 Rpdx1_4514 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110797.1 4849516 D 652103 CDS YP_004110798.1 316935816 10066751 complement(4850468..4850881) 1 NC_014834.1 KEGG: bja:bll7059 hypothetical protein; hypothetical protein 4850881 10066751 Rpdx1_4515 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110798.1 4850468 R 652103 CDS YP_004110799.1 316935817 10066752 4851116..4852021 1 NC_014834.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bra:BRADO5941 DMT family permease; hypothetical protein 4852021 10066752 Rpdx1_4516 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110799.1 4851116 D 652103 CDS YP_004110800.1 316935818 10066753 complement(4852002..4854131) 1 NC_014834.1 PFAM: histidine kinase HAMP region domain protein; KEGG: nha:Nham_1080 methyl-accepting chemotaxis sensory transducer; histidine kinase HAMP region domain-containing protein 4854131 10066753 Rpdx1_4517 Rhodopseudomonas palustris DX-1 histidine kinase HAMP region domain-containing protein YP_004110800.1 4852002 R 652103 CDS YP_004110801.1 316935819 10066754 complement(4854448..4856640) 1 NC_014834.1 KEGG: bja:blr2932 hypothetical protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 4856640 10066754 Rpdx1_4518 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004110801.1 4854448 R 652103 CDS YP_004110802.1 316935820 10066755 complement(4856772..4857743) 1 NC_014834.1 PFAM: Rubrerythrin; protein of unknown function DUF125 transmembrane; KEGG: bbt:BBta_7128 hypothetical protein; rubrerythrin 4857743 10066755 Rpdx1_4519 Rhodopseudomonas palustris DX-1 rubrerythrin YP_004110802.1 4856772 R 652103 CDS YP_004110803.1 316935821 10066756 4857919..4859277 1 NC_014834.1 KEGG: bra:BRADO5942 putative signal peptide; hypothetical protein 4859277 10066756 Rpdx1_4520 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110803.1 4857919 D 652103 CDS YP_004110804.1 316935822 10066757 complement(4859810..4860148) 1 NC_014834.1 KEGG: bja:blr7338 hypothetical protein; hypothetical protein 4860148 10066757 Rpdx1_4521 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110804.1 4859810 R 652103 CDS YP_004110805.1 316935823 10066758 complement(4860232..4861917) 1 NC_014834.1 KEGG: bra:BRADO5943 putative methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache sensor containing methyl-accepting chemotaxis sensory transducer 4861917 10066758 Rpdx1_4522 Rhodopseudomonas palustris DX-1 Cache sensor containing methyl-accepting chemotaxis sensory transducer YP_004110805.1 4860232 R 652103 CDS YP_004110806.1 316935824 10066759 complement(4862162..4863847) 1 NC_014834.1 KEGG: bja:bll7062 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache sensor containing methyl-accepting chemotaxis sensory transducer 4863847 10066759 Rpdx1_4523 Rhodopseudomonas palustris DX-1 Cache sensor containing methyl-accepting chemotaxis sensory transducer YP_004110806.1 4862162 R 652103 CDS YP_004110807.1 316935825 10066760 complement(4864093..4865682) 1 NC_014834.1 KEGG: nha:Nham_1119 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; D-3-phosphoglycerate dehydrogenase 4865682 10066760 Rpdx1_4524 Rhodopseudomonas palustris DX-1 D-3-phosphoglycerate dehydrogenase YP_004110807.1 4864093 R 652103 CDS YP_004110808.1 316935826 10066761 complement(4865851..4867023) 1 NC_014834.1 KEGG: oca:OCAR_7158 phosphoserine aminotransferase; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase 4867023 10066761 Rpdx1_4525 Rhodopseudomonas palustris DX-1 phosphoserine aminotransferase YP_004110808.1 4865851 R 652103 CDS YP_004110809.1 316935827 10066762 complement(4867273..4868574) 1 NC_014834.1 KEGG: bja:blr2976 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 4868574 10066762 Rpdx1_4526 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004110809.1 4867273 R 652103 CDS YP_004110810.1 316935828 10066763 complement(4868552..4869076) 1 NC_014834.1 KEGG: bja:blr2975 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; PAS sensor protein 4869076 10066763 Rpdx1_4527 Rhodopseudomonas palustris DX-1 PAS sensor protein YP_004110810.1 4868552 R 652103 CDS YP_004110811.1 316935829 10066764 complement(4869248..4869718) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bbt:BBta_1821 hypothetical protein; N-acetyltransferase GCN5 4869718 10066764 Rpdx1_4528 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004110811.1 4869248 R 652103 CDS YP_004110812.1 316935830 10066765 complement(4869727..4870326) 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bja:bll7404 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein 4870326 10066765 Rpdx1_4529 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004110812.1 4869727 R 652103 CDS YP_004110813.1 316935831 10066766 complement(4870374..4871165) 1 NC_014834.1 TIGRFAM: outer membrane insertion C-terminal signal; KEGG: oca:OCAR_7161 hypothetical protein; outer membrane insertion C-terminal signal 4871165 10066766 Rpdx1_4530 Rhodopseudomonas palustris DX-1 outer membrane insertion C-terminal signal YP_004110813.1 4870374 R 652103 CDS YP_004110814.1 316935832 10066767 complement(4871312..4872157) 1 NC_014834.1 PFAM: porin; KEGG: bra:BRADO5955 putative outer surface protein (OmpA-like); putative heat-resistant agglutinin 1; porin 4872157 10066767 Rpdx1_4531 Rhodopseudomonas palustris DX-1 porin YP_004110814.1 4871312 R 652103 CDS YP_004110815.1 316935833 10066768 complement(4872476..4873741) 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll7407 fosmidomycin resistance protein; major facilitator superfamily protein 4873741 10066768 Rpdx1_4532 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004110815.1 4872476 R 652103 CDS YP_004110816.1 316935834 10066769 complement(4873912..4875264) 1 NC_014834.1 KEGG: bbt:BBta_1817 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase 4875264 10066769 Rpdx1_4533 Rhodopseudomonas palustris DX-1 phosphoglucosamine mutase YP_004110816.1 4873912 R 652103 CDS YP_004110817.1 316935835 10066770 complement(4875466..4875627) 1 NC_014834.1 KEGG: nha:Nham_1113 hypothetical protein; hypothetical protein 4875627 10066770 Rpdx1_4534 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110817.1 4875466 R 652103 CDS YP_004110818.1 316935836 10066771 4875791..4876930 1 NC_014834.1 KEGG: bja:blr7409 L-lactate dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; L-lactate dehydrogenase 4876930 10066771 Rpdx1_4535 Rhodopseudomonas palustris DX-1 L-lactate dehydrogenase YP_004110818.1 4875791 D 652103 CDS YP_004110819.1 316935837 10066772 4877121..4877936 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bja:blr2952 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4877936 10066772 Rpdx1_4536 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110819.1 4877121 D 652103 CDS YP_004110820.1 316935838 10066773 4877964..4878593 1 NC_014834.1 PFAM: protein of unknown function UPF0126; KEGG: mdi:METDI4469 hypothetical protein; hypothetical protein 4878593 10066773 Rpdx1_4537 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110820.1 4877964 D 652103 CDS YP_004110821.1 316935839 10066774 complement(4878625..4879464) 1 NC_014834.1 KEGG: nha:Nham_1109 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; shikimate 5-dehydrogenase 4879464 10066774 Rpdx1_4538 Rhodopseudomonas palustris DX-1 shikimate 5-dehydrogenase YP_004110821.1 4878625 R 652103 CDS YP_004110822.1 316935840 10066775 complement(4879564..4881315) 1 NC_014834.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: nha:Nham_1108 sulphate transporter; sulfate transporter 4881315 10066775 Rpdx1_4539 Rhodopseudomonas palustris DX-1 sulfate transporter YP_004110822.1 4879564 R 652103 CDS YP_004110823.1 316935841 10066776 complement(4881356..4881625) 1 NC_014834.1 PFAM: helix-turn-helix domain protein; KEGG: mno:Mnod_1557 transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 4881625 10066776 Rpdx1_4540 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004110823.1 4881356 R 652103 CDS YP_004110824.1 316935842 10066777 complement(4881796..4883847) 1 NC_014834.1 KEGG: bra:BRADO5970 elongation factor G; TIGRFAM: small GTP-binding protein; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; small GTP-binding protein 4883847 10066777 Rpdx1_4541 Rhodopseudomonas palustris DX-1 small GTP-binding protein YP_004110824.1 4881796 R 652103 CDS YP_004110825.1 316935843 10066778 complement(4884057..4884530) 1 NC_014834.1 PFAM: protein of unknown function DUF992; KEGG: bja:bll7415 hypothetical protein; hypothetical protein 4884530 10066778 Rpdx1_4542 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110825.1 4884057 R 652103 CDS YP_004110826.1 316935844 10066779 complement(4884754..4885275) 1 NC_014834.1 PFAM: protein of unknown function DUF992; KEGG: nha:Nham_1104 hypothetical protein; hypothetical protein 4885275 10066779 Rpdx1_4543 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110826.1 4884754 R 652103 CDS YP_004110827.1 316935845 10066780 complement(4885403..4886605) 1 NC_014834.1 PFAM: aminotransferase class I and II; KEGG: nha:Nham_1103 aspartate aminotransferase; class I/II aminotransferase 4886605 10066780 Rpdx1_4544 Rhodopseudomonas palustris DX-1 class I/II aminotransferase YP_004110827.1 4885403 R 652103 CDS YP_004110828.1 316935846 10066781 4886796..4887671 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO5975 putative glutathione S-transferase (GST); putative maleylacetoacetate isomerase; glutathione S-transferase domain-containing protein 4887671 10066781 Rpdx1_4545 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004110828.1 4886796 D 652103 CDS YP_004110829.1 316935847 10066782 4887804..4887995 1 NC_014834.1 KEGG: hoh:Hoch_6606 HtrA2 peptidase; HtrA2 peptidase 4887995 10066782 Rpdx1_4546 Rhodopseudomonas palustris DX-1 HtrA2 peptidase YP_004110829.1 4887804 D 652103 CDS YP_004110830.1 316935848 10066783 4888100..4889266 1 NC_014834.1 KEGG: nwi:Nwi_2982 hypothetical protein; hypothetical protein 4889266 10066783 Rpdx1_4547 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110830.1 4888100 D 652103 CDS YP_004110831.1 316935849 10066784 4889479..4890327 1 NC_014834.1 KEGG: oca:OCAR_7178 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4890327 10066784 Rpdx1_4548 Rhodopseudomonas palustris DX-1 phospholipid/glycerol acyltransferase YP_004110831.1 4889479 D 652103 CDS YP_004110832.1 316935850 10066785 complement(4890339..4891058) 1 NC_014834.1 PFAM: DnaB domain protein helicase domain protein; KEGG: bja:blr5258 replicative DNA helicase; DnaB domain-containing protein helicase domain-containing protein 4891058 10066785 Rpdx1_4549 Rhodopseudomonas palustris DX-1 DnaB domain-containing protein helicase domain-containing protein YP_004110832.1 4890339 R 652103 CDS YP_004110833.1 316935851 10066786 4891350..4892291 1 NC_014834.1 PFAM: aldo/keto reductase; KEGG: bja:blr7422 oxidoreductase; aldo/keto reductase 4892291 10066786 Rpdx1_4550 Rhodopseudomonas palustris DX-1 aldo/keto reductase YP_004110833.1 4891350 D 652103 CDS YP_004110834.1 316935852 10066787 4892445..4892798 1 NC_014834.1 manually curated; KEGG: nwi:Nwi_2494 hypothetical protein; hypothetical protein 4892798 10066787 Rpdx1_4551 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110834.1 4892445 D 652103 CDS YP_004110835.1 316935853 10066788 4892795..4893502 1 NC_014834.1 KEGG: bbt:BBta_1791 putative haloacid dehalogenase/epoxide hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 4893502 10066788 Rpdx1_4552 Rhodopseudomonas palustris DX-1 HAD-superfamily hydrolase YP_004110835.1 4892795 D 652103 CDS YP_004110836.1 316935854 10066789 complement(4893429..4894112) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: bbt:BBta_1790 TetR family transcriptional regulator; regulatory protein TetR 4894112 10066789 Rpdx1_4553 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004110836.1 4893429 R 652103 CDS YP_004110837.1 316935855 10066790 4894193..4894984 1 NC_014834.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sme:SMc01669 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 4894984 10066790 Rpdx1_4554 Rhodopseudomonas palustris DX-1 enoyl-CoA hydratase/isomerase YP_004110837.1 4894193 D 652103 CDS YP_004110838.1 316935856 10066791 complement(4894972..4895667) 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO5989 putative glutathione S-transferase (GST); glutathione S-transferase domain-containing protein 4895667 10066791 Rpdx1_4555 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004110838.1 4894972 R 652103 CDS YP_004110839.1 316935857 10066792 complement(4895962..4897947) 1 NC_014834.1 KEGG: rme:Rmet_2149 beta-lactamase-like protein; beta-lactamase-like protein 4897947 10066792 Rpdx1_4556 Rhodopseudomonas palustris DX-1 beta-lactamase-like protein YP_004110839.1 4895962 R 652103 CDS YP_004110840.1 316935858 10066793 4898163..4899215 1 NC_014834.1 KEGG: oca:OCAR_7182 hypothetical protein; hypothetical protein 4899215 10066793 Rpdx1_4557 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110840.1 4898163 D 652103 CDS YP_004110841.1 316935859 10066794 4899276..4902338 1 NC_014834.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: nha:Nham_2923 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein; excinuclease ABC subunit B 4902338 10066794 Rpdx1_4558 Rhodopseudomonas palustris DX-1 excinuclease ABC subunit B YP_004110841.1 4899276 D 652103 CDS YP_004110842.1 316935860 10066795 4902449..4903093 1 NC_014834.1 PFAM: MT-A70 family protein; KEGG: mca:MCA0246 adenine-specific DNA methyltransferase; MT-A70 family protein 4903093 10066795 Rpdx1_4559 Rhodopseudomonas palustris DX-1 MT-A70 family protein YP_004110842.1 4902449 D 652103 CDS YP_004110843.1 316935861 10066796 4903107..4904195 1 NC_014834.1 KEGG: ret:RHE_CH03388 exopolysaccharide biosynthesis protein; hypothetical protein 4904195 10066796 Rpdx1_4560 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110843.1 4903107 D 652103 CDS YP_004110844.1 316935862 10066797 4904195..4904617 1 NC_014834.1 PFAM: PilT protein domain protein; KEGG: atc:AGR_L_3577 hypothetical protein; PilT domain-containing protein 4904617 10066797 Rpdx1_4561 Rhodopseudomonas palustris DX-1 PilT domain-containing protein YP_004110844.1 4904195 D 652103 CDS YP_004110845.1 316935863 10066798 4904691..4904936 1 NC_014834.1 KEGG: vvy:VVP32 hypothetical protein; hypothetical protein 4904936 10066798 Rpdx1_4562 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110845.1 4904691 D 652103 CDS YP_004110846.1 316935864 10066799 complement(4904951..4905271) 1 NC_014834.1 KEGG: nha:Nham_2927 hypothetical protein; hypothetical protein 4905271 10066799 Rpdx1_4563 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110846.1 4904951 R 652103 CDS YP_004110847.1 316935865 10066800 complement(4905628..4906881) 1 NC_014834.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: swi:Swit_1771 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 4906881 10066800 Rpdx1_4564 Rhodopseudomonas palustris DX-1 acetyl-CoA acetyltransferase YP_004110847.1 4905628 R 652103 CDS YP_004110848.1 316935866 10066801 4907110..4907544 1 NC_014834.1 KEGG: nha:Nham_2926 hypothetical protein; hypothetical protein 4907544 10066801 Rpdx1_4565 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110848.1 4907110 D 652103 CDS YP_004110849.1 316935867 10066802 4908032..4908463 1 NC_014834.1 KEGG: bja:blr7434 hypothetical protein; hypothetical protein 4908463 10066802 Rpdx1_4566 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110849.1 4908032 D 652103 CDS YP_004110850.1 316935868 10066803 4908671..4909105 1 NC_014834.1 KEGG: nha:Nham_2929 hypothetical protein; hypothetical protein 4909105 10066803 Rpdx1_4567 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110850.1 4908671 D 652103 CDS YP_004110851.1 316935869 10066804 complement(4909288..4909449) 1 NC_014834.1 KEGG: bra:BRADO6012 putative signal peptide; hypothetical protein 4909449 10066804 Rpdx1_4568 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110851.1 4909288 R 652103 CDS YP_004110852.1 316935870 10066805 complement(4909594..4910076) 1 NC_014834.1 PFAM: MaoC domain protein dehydratase; KEGG: nha:Nham_3098 MaoC-like dehydratase; MaoC domain-containing protein dehydratase 4910076 10066805 Rpdx1_4569 Rhodopseudomonas palustris DX-1 MaoC domain-containing protein dehydratase YP_004110852.1 4909594 R 652103 CDS YP_004110853.1 316935871 10066806 complement(4910085..4910552) 1 NC_014834.1 PFAM: MaoC domain protein dehydratase; KEGG: bra:BRADO6010 hypothetical protein; MaoC domain-containing protein dehydratase 4910552 10066806 Rpdx1_4570 Rhodopseudomonas palustris DX-1 MaoC domain-containing protein dehydratase YP_004110853.1 4910085 R 652103 CDS YP_004110854.1 316935872 10066807 4910638..4910931 1 NC_014834.1 KEGG: nha:Nham_3100 hypothetical protein; hypothetical protein 4910931 10066807 Rpdx1_4571 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110854.1 4910638 D 652103 CDS YP_004110855.1 316935873 10066808 complement(4911078..4912175) 1 NC_014834.1 KEGG: oca:OCAR_7188 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP-binding protein HSR1-related; GTP-binding protein YchF 4912175 10066808 Rpdx1_4572 Rhodopseudomonas palustris DX-1 GTP-binding protein YchF YP_004110855.1 4911078 R 652103 CDS YP_004110856.1 316935874 10066809 complement(4912292..4912903) 1 NC_014834.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: oca:OCAR_7189 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 4912903 10066809 Rpdx1_4573 Rhodopseudomonas palustris DX-1 peptidyl-tRNA hydrolase YP_004110856.1 4912292 R 652103 CDS YP_004110857.1 316935875 10066810 complement(4912925..4913614) 1 NC_014834.1 KEGG: bja:bll7441 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like; ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 4913614 10066810 Rpdx1_4574 Rhodopseudomonas palustris DX-1 ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 YP_004110857.1 4912925 R 652103 CDS YP_004110858.1 316935876 10066811 complement(4913939..4914217) 1 NC_014834.1 PFAM: protein of unknown function DUF526; KEGG: bra:BRADO6005 hypothetical protein; hypothetical protein 4914217 10066811 Rpdx1_4575 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110858.1 4913939 R 652103 CDS YP_004110859.1 316935877 10066812 4914471..4915322 1 NC_014834.1 KEGG: nha:Nham_3095 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 4915322 10066812 Rpdx1_4576 Rhodopseudomonas palustris DX-1 prolipoprotein diacylglyceryl transferase YP_004110859.1 4914471 D 652103 CDS YP_004110860.1 316935878 10066813 4915319..4916458 1 NC_014834.1 PFAM: protein of unknown function DUF185; KEGG: bra:BRADO6003 hypothetical protein; hypothetical protein 4916458 10066813 Rpdx1_4577 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110860.1 4915319 D 652103 CDS YP_004110861.1 316935879 10066814 4916455..4917228 1 NC_014834.1 PFAM: protein of unknown function DUF152; KEGG: bra:BRADO6002 hypothetical protein; hypothetical protein 4917228 10066814 Rpdx1_4578 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110861.1 4916455 D 652103 CDS YP_004110862.1 316935880 10066815 4917456..4918064 1 NC_014834.1 KEGG: nha:Nham_3092 hypothetical protein; hypothetical protein 4918064 10066815 Rpdx1_4579 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110862.1 4917456 D 652103 CDS YP_004110863.1 316935881 10066816 4918191..4919186 1 NC_014834.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: nwi:Nwi_2501 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 4919186 10066816 Rpdx1_4580 Rhodopseudomonas palustris DX-1 ribose-phosphate pyrophosphokinase YP_004110863.1 4918191 D 652103 CDS YP_004110864.1 316935882 10066817 complement(4919381..4919914) 1 NC_014834.1 PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: bra:BRADO6033 riboflavin synthase subunit beta; 67-dimethyl-8-ribityllumazine synthase 4919914 10066817 Rpdx1_4581 Rhodopseudomonas palustris DX-1 67-dimethyl-8-ribityllumazine synthase YP_004110864.1 4919381 R 652103 CDS YP_004110865.1 316935883 10066818 4920269..4920769 1 NC_014834.1 PFAM: Protein of unknown function DUF1790; KEGG: nwi:Nwi_2513 hypothetical protein; hypothetical protein 4920769 10066818 Rpdx1_4582 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110865.1 4920269 D 652103 CDS YP_004110866.1 316935884 10066819 4920974..4921807 1 NC_014834.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: nha:Nham_3106 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 4921807 10066819 Rpdx1_4583 Rhodopseudomonas palustris DX-1 pyrroline-5-carboxylate reductase YP_004110866.1 4920974 D 652103 CDS YP_004110867.1 316935885 10066820 complement(4922087..4923475) 1 NC_014834.1 KEGG: bja:blr7462 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 4923475 10066820 Rpdx1_4584 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004110867.1 4922087 R 652103 CDS YP_004110868.1 316935886 10066821 complement(4923637..4924359) 1 NC_014834.1 KEGG: nha:Nham_3137 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 4924359 10066821 Rpdx1_4585 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004110868.1 4923637 R 652103 CDS YP_004110869.1 316935887 10066822 complement(4924356..4924910) 1 NC_014834.1 KEGG: bbt:BBta_1738 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 4924910 10066822 Rpdx1_4586 Rhodopseudomonas palustris DX-1 MarR family transcriptional regulator YP_004110869.1 4924356 R 652103 CDS YP_004110870.1 316935888 10066823 4925196..4926308 1 NC_014834.1 TIGRFAM: branched-chain amino acid aminotransferase; KEGG: nha:Nham_3139 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; branched-chain amino acid aminotransferase 4926308 10066823 Rpdx1_4587 Rhodopseudomonas palustris DX-1 branched-chain amino acid aminotransferase YP_004110870.1 4925196 D 652103 CDS YP_004110871.1 316935889 10066824 complement(4926449..4928236) 1 NC_014834.1 KEGG: bja:blr7493 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; DNA mismatch repair protein MutL 4928236 10066824 Rpdx1_4588 Rhodopseudomonas palustris DX-1 DNA mismatch repair protein MutL YP_004110871.1 4926449 R 652103 CDS YP_004110872.1 316935890 10066825 complement(4928449..4928868) 1 NC_014834.1 PFAM: Class I peptide chain release factor; KEGG: bja:blr7486 peptidyl-tRNA hydrolase domain protein; class I peptide chain release factor 4928868 10066825 Rpdx1_4589 Rhodopseudomonas palustris DX-1 class I peptide chain release factor YP_004110872.1 4928449 R 652103 CDS YP_004110873.1 316935891 10066826 complement(4929193..4930581) 1 NC_014834.1 PFAM: Chromogranin/secretogranin; peptidase M16 domain protein; KEGG: bra:BRADO6071 putative Zn-dependent protease; chromogranin/secretogranin 4930581 10066826 Rpdx1_4590 Rhodopseudomonas palustris DX-1 chromogranin/secretogranin YP_004110873.1 4929193 R 652103 CDS YP_004110874.1 316935892 10066827 complement(4930578..4931972) 1 NC_014834.1 PFAM: peptidase M16 domain protein; KEGG: bja:blr7484 zinc protease; peptidase M16 domain-containing protein 4931972 10066827 Rpdx1_4591 Rhodopseudomonas palustris DX-1 peptidase M16 domain-containing protein YP_004110874.1 4930578 R 652103 CDS YP_004110875.1 316935893 10066828 complement(4932156..4932872) 1 NC_014834.1 KEGG: bbt:BBta_1714 hypothetical protein; hypothetical protein 4932872 10066828 Rpdx1_4592 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110875.1 4932156 R 652103 CDS YP_004110876.1 316935894 10066829 complement(4932953..4933447) 1 NC_014834.1 KEGG: bja:blr7482 putative lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase 4933447 10066829 Rpdx1_4593 Rhodopseudomonas palustris DX-1 lipoprotein signal peptidase YP_004110876.1 4932953 R 652103 CDS YP_004110877.1 316935895 10066830 complement(4933644..4936823) 1 NC_014834.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: nha:Nham_3162 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 4936823 10066830 Rpdx1_4594 Rhodopseudomonas palustris DX-1 isoleucyl-tRNA synthetase YP_004110877.1 4933644 R 652103 CDS YP_004110878.1 316935896 10066832 complement(4937200..4937757) 1 NC_014834.1 KEGG: aav:Aave_2849 putative acetyltransferase; putative acetyltransferase 4937757 10066832 Rpdx1_4596 Rhodopseudomonas palustris DX-1 putative acetyltransferase YP_004110878.1 4937200 R 652103 CDS YP_004110879.1 316935897 10066833 complement(4937754..4938722) 1 NC_014834.1 KEGG: bja:blr7480 riboflavin biosynthesis bifunctional protein; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF 4938722 10066833 Rpdx1_4597 Rhodopseudomonas palustris DX-1 riboflavin biosynthesis protein RibF YP_004110879.1 4937754 R 652103 CDS YP_004110880.1 316935898 10066834 complement(4938842..4939549) 1 NC_014834.1 PFAM: ribonuclease T2; KEGG: nha:Nham_3150 ribonuclease T2; ribonuclease T2 4939549 10066834 Rpdx1_4598 Rhodopseudomonas palustris DX-1 ribonuclease T2 YP_004110880.1 4938842 R 652103 CDS YP_004110881.1 316935899 10066835 complement(4939654..4940115) 1 NC_014834.1 KEGG: bbt:BBta_1733 hypothetical protein; hypothetical protein 4940115 10066835 Rpdx1_4599 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110881.1 4939654 R 652103 CDS YP_004110882.1 316935900 10066836 4940282..4940572 1 NC_014834.1 KEGG: nha:Nham_3152 hypothetical protein; hypothetical protein 4940572 10066836 Rpdx1_4600 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110882.1 4940282 D 652103 CDS YP_004110883.1 316935901 10066837 4940587..4941129 1 NC_014834.1 KEGG: bra:BRADO6048 putative signal peptide; hypothetical protein 4941129 10066837 Rpdx1_4601 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110883.1 4940587 D 652103 CDS YP_004110884.1 316935902 10066838 4941552..4941914 1 NC_014834.1 KEGG: bbt:BBta_2267 hypothetical protein; hypothetical protein 4941914 10066838 Rpdx1_4602 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110884.1 4941552 D 652103 CDS YP_004110885.1 316935903 10066839 4942032..4944389 1 NC_014834.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_3257 TonB-dependent receptor, plug; TonB-dependent receptor 4944389 10066839 Rpdx1_4603 Rhodopseudomonas palustris DX-1 TonB-dependent receptor YP_004110885.1 4942032 D 652103 CDS YP_004110886.1 316935904 10066840 complement(4944511..4945065) 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_3258 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4945065 10066840 Rpdx1_4604 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004110886.1 4944511 R 652103 CDS YP_004110887.1 316935905 10066841 complement(4945087..4946739) 1 NC_014834.1 PFAM: MscS Mechanosensitive ion channel; KEGG: MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 4946739 10066841 Rpdx1_4605 Rhodopseudomonas palustris DX-1 mechanosensitive ion channel protein MscS YP_004110887.1 4945087 R 652103 CDS YP_004110888.1 316935906 10066842 complement(4946995..4947483) 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: nha:Nham_3259 NUDIX hydrolase; NUDIX hydrolase 4947483 10066842 Rpdx1_4606 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004110888.1 4946995 R 652103 CDS YP_004110889.1 316935907 10066843 4947619..4948500 1 NC_014834.1 PFAM: metallophosphoesterase; KEGG: bja:bll2457 hypothetical protein; metallophosphoesterase 4948500 10066843 Rpdx1_4607 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004110889.1 4947619 D 652103 CDS YP_004110890.1 316935908 10066844 complement(4948542..4949093) 1 NC_014834.1 manually curated; KEGG: nha:Nham_1099 hypothetical protein; hypothetical protein 4949093 10066844 Rpdx1_4608 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110890.1 4948542 R 652103 CDS YP_004110891.1 316935909 10066845 complement(4949357..4949572) 1 NC_014834.1 KEGG: nha:Nham_1098 hypothetical protein; hypothetical protein 4949572 10066845 Rpdx1_4609 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110891.1 4949357 R 652103 CDS YP_004110892.1 316935910 10066846 complement(4949597..4951237) 1 NC_014834.1 PFAM: isocitrate lyase and phosphorylmutase; KEGG: bja:blr2455 isocitrate lyase; isocitrate lyase and phosphorylmutase 4951237 10066846 Rpdx1_4610 Rhodopseudomonas palustris DX-1 isocitrate lyase and phosphorylmutase YP_004110892.1 4949597 R 652103 CDS YP_004110893.1 316935911 10066847 4951454..4952896 1 NC_014834.1 KEGG: nha:Nham_1096 XRE family transcriptional regulator; PFAM: Protein of unknown function DUF2083,transcriptional regulator; protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator 4952896 10066847 Rpdx1_4611 Rhodopseudomonas palustris DX-1 XRE family transcriptional regulator YP_004110893.1 4951454 D 652103 CDS YP_004110894.1 316935912 10066848 complement(4952893..4953363) 1 NC_014834.1 KEGG: bbt:BBta_4922 hypothetical protein; hypothetical protein 4953363 10066848 Rpdx1_4612 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110894.1 4952893 R 652103 CDS YP_004110895.1 316935913 10066849 4953488..4954870 1 NC_014834.1 KEGG: nha:Nham_1092 lytic murein transglycosylase; TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; lytic murein transglycosylase 4954870 10066849 Rpdx1_4613 Rhodopseudomonas palustris DX-1 lytic murein transglycosylase YP_004110895.1 4953488 D 652103 CDS YP_004110896.1 316935914 10066850 4954952..4956136 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bra:BRADO0500 putative branched-chain amino-acid ABC transporter, periplasmic binding protein; extracellular ligand-binding receptor 4956136 10066850 Rpdx1_4614 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004110896.1 4954952 D 652103 CDS YP_004110897.1 316935915 10066851 4956275..4957039 1 NC_014834.1 KEGG: bbt:BBta_7683 putative branched-chain amino acid ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4957039 10066851 Rpdx1_4615 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110897.1 4956275 D 652103 CDS YP_004110898.1 316935916 10066853 4957281..4958003 1 NC_014834.1 KEGG: bja:bll0885 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 4958003 10066853 Rpdx1_4617 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110898.1 4957281 D 652103 CDS YP_004110899.1 316935917 10066854 4958003..4958152 1 NC_014834.1 hypothetical protein 4958152 10066854 Rpdx1_4618 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110899.1 4958003 D 652103 CDS YP_004110900.1 316935918 10066855 4958149..4959174 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_7685 putative branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 4959174 10066855 Rpdx1_4619 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110900.1 4958149 D 652103 CDS YP_004110901.1 316935919 10066856 4959171..4960238 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_7686 putative branched-chain amino acid ABC transporter, permease protein; inner-membrane translocator 4960238 10066856 Rpdx1_4620 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004110901.1 4959171 D 652103 CDS YP_004110902.1 316935920 10066857 4960615..4960920 1 NC_014834.1 KEGG: sen:SACE_5236 sodium/hydrogen exchanger; sodium/hydrogen exchanger 4960920 10066857 Rpdx1_4621 Rhodopseudomonas palustris DX-1 sodium/hydrogen exchanger YP_004110902.1 4960615 D 652103 CDS YP_004110903.1 316935921 10066858 4961166..4962266 1 NC_014834.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bbt:BBta_2240 N-ethylmaleimide reductase, FMN-linked; NADH:flavin oxidoreductase 4962266 10066858 Rpdx1_4622 Rhodopseudomonas palustris DX-1 NADH:flavin oxidoreductase YP_004110903.1 4961166 D 652103 CDS YP_004110904.1 316935922 10066860 complement(4964350..4964679) 1 NC_014834.1 PFAM: Protein of unknown function DUF2160, transmembrane; KEGG: bra:BRADO1913 hypothetical protein; hypothetical protein 4964679 10066860 Rpdx1_4624 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110904.1 4964350 R 652103 CDS YP_004110905.1 316935923 10066861 complement(4964687..4965493) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr2440 ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 4965493 10066861 Rpdx1_4625 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110905.1 4964687 R 652103 CDS YP_004110906.1 316935924 10066862 complement(4965493..4966395) 1 NC_014834.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2224 putative ABC transporter permease protein; binding-protein-dependent transporter inner membrane component 4966395 10066862 Rpdx1_4626 Rhodopseudomonas palustris DX-1 binding-protein-dependent transporter inner membrane component YP_004110906.1 4965493 R 652103 CDS YP_004110907.1 316935925 10066863 complement(4966395..4967495) 1 NC_014834.1 KEGG: bra:BRADO1910 putative ATP-binding protein of sugar ABC transporter; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; ABC transporter-like protein 4967495 10066863 Rpdx1_4627 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110907.1 4966395 R 652103 CDS YP_004110908.1 316935926 10066864 complement(4967508..4968587) 1 NC_014834.1 KEGG: bja:blr2437 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; ABC transporter-like protein 4968587 10066864 Rpdx1_4628 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004110908.1 4967508 R 652103 CDS YP_004110909.1 316935927 10066865 complement(4968584..4970119) 1 NC_014834.1 KEGG: bra:BRADO1908 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase 4970119 10066865 Rpdx1_4629 Rhodopseudomonas palustris DX-1 glycerol-3-phosphate dehydrogenase YP_004110909.1 4968584 R 652103 CDS YP_004110910.1 316935928 10066866 complement(4970315..4971112) 1 NC_014834.1 KEGG: bja:blr2433 transcriptional regulatory protein; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 4971112 10066866 Rpdx1_4630 Rhodopseudomonas palustris DX-1 DeoR family transcriptional regulator YP_004110910.1 4970315 R 652103 CDS YP_004110911.1 316935929 10066867 complement(4971383..4972000) 1 NC_014834.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bja:blr2425 hypothetical protein; flavin reductase FMN-binding protein 4972000 10066867 Rpdx1_4631 Rhodopseudomonas palustris DX-1 flavin reductase FMN-binding protein YP_004110911.1 4971383 R 652103 CDS YP_004110912.1 316935930 10066868 complement(4972018..4972632) 1 NC_014834.1 PFAM: regulatory protein TetR; KEGG: nha:Nham_1083 TetR family transcriptional regulator; regulatory protein TetR 4972632 10066868 Rpdx1_4632 Rhodopseudomonas palustris DX-1 regulatory protein TetR YP_004110912.1 4972018 R 652103 CDS YP_004110913.1 316935931 10066869 complement(4972650..4975787) 1 NC_014834.1 PFAM: acriflavin resistance protein; KEGG: bja:blr2423 cation efflux system protein; acriflavin resistance protein 4975787 10066869 Rpdx1_4633 Rhodopseudomonas palustris DX-1 acriflavin resistance protein YP_004110913.1 4972650 R 652103 CDS YP_004110914.1 316935932 10066870 complement(4975809..4976915) 1 NC_014834.1 KEGG: bbt:BBta_2214 putative component of multidrug efflux system; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 4976915 10066870 Rpdx1_4634 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004110914.1 4975809 R 652103 CDS YP_004110915.1 316935933 10066871 complement(4977006..4979627) 1 NC_014834.1 KEGG: bbt:BBta_4427 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; multi-sensor hybrid histidine kinase 4979627 10066871 Rpdx1_4635 Rhodopseudomonas palustris DX-1 multi-sensor hybrid histidine kinase YP_004110915.1 4977006 R 652103 CDS YP_004110916.1 316935934 10066872 4980005..4980220 1 NC_014834.1 PFAM: CsbD family protein; KEGG: nha:Nham_1079 CsbD-like; CsbD family protein 4980220 10066872 Rpdx1_4636 Rhodopseudomonas palustris DX-1 CsbD family protein YP_004110916.1 4980005 D 652103 CDS YP_004110917.1 316935935 10066873 complement(4980309..4981895) 1 NC_014834.1 TIGRFAM: gamma-glutamyltransferase; KEGG: bra:BRADO1881 putative gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 4981895 10066873 Rpdx1_4637 Rhodopseudomonas palustris DX-1 gamma-glutamyltransferase YP_004110917.1 4980309 R 652103 CDS YP_004110918.1 316935936 10066874 4982141..4982356 1 NC_014834.1 PFAM: SlyX family protein; KEGG: bja:bsl2402 hypothetical protein; SlyX family protein 4982356 10066874 Rpdx1_4638 Rhodopseudomonas palustris DX-1 SlyX family protein YP_004110918.1 4982141 D 652103 CDS YP_004110919.1 316935937 10066875 complement(4982511..4984049) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cak:Caul_0814 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4984049 10066875 Rpdx1_4639 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110919.1 4982511 R 652103 CDS YP_004110920.1 316935938 10066876 complement(4984377..4985042) 1 NC_014834.1 KEGG: bja:bll2244 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 4985042 10066876 Rpdx1_4640 Rhodopseudomonas palustris DX-1 Crp/Fnr family transcriptional regulator YP_004110920.1 4984377 R 652103 CDS YP_004110921.1 316935939 10066877 complement(4985187..4985600) 1 NC_014834.1 KEGG: bra:BRADO6425 hypothetical protein; hypothetical protein 4985600 10066877 Rpdx1_4641 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110921.1 4985187 R 652103 CDS YP_004110922.1 316935940 10066878 4985735..4986583 1 NC_014834.1 KEGG: bja:blr7890 putative beta-lactamase; putative beta-lactamase 4986583 10066878 Rpdx1_4642 Rhodopseudomonas palustris DX-1 putative beta-lactamase YP_004110922.1 4985735 D 652103 CDS YP_004110923.1 316935941 10066879 4986693..4987535 1 NC_014834.1 KEGG: bja:blr7891 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; ureidoglycolate lyase 4987535 10066879 Rpdx1_4643 Rhodopseudomonas palustris DX-1 ureidoglycolate lyase YP_004110923.1 4986693 D 652103 CDS YP_004110924.1 316935942 10066880 4987717..4988334 1 NC_014834.1 PFAM: Glutathione S-transferase domain; KEGG: bra:BRADO6428 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 4988334 10066880 Rpdx1_4644 Rhodopseudomonas palustris DX-1 glutathione S-transferase domain-containing protein YP_004110924.1 4987717 D 652103 CDS YP_004110925.1 316935943 10066881 complement(4988346..4988897) 1 NC_014834.1 KEGG: nha:Nham_0663 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 4988897 10066881 Rpdx1_4645 Rhodopseudomonas palustris DX-1 methylated-DNA--protein-cysteine methyltransferase YP_004110925.1 4988346 R 652103 CDS YP_004110926.1 316935944 10066882 complement(4988941..4989489) 1 NC_014834.1 KEGG: cja:CJA_0504 glycosyl transferase, putative, gt4E; glycosyl transferase family protein 4989489 10066882 Rpdx1_4646 Rhodopseudomonas palustris DX-1 glycosyl transferase family protein YP_004110926.1 4988941 R 652103 CDS YP_004110927.1 316935945 10066883 complement(4989678..4990262) 1 NC_014834.1 KEGG: bja:blr1408 hypothetical protein; hypothetical protein 4990262 10066883 Rpdx1_4647 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110927.1 4989678 R 652103 CDS YP_004110928.1 316935946 10066884 4990597..4991100 1 NC_014834.1 PFAM: GCN5-related N-acetyltransferase; KEGG: avi:Avi_2379 acetyltransferase; N-acetyltransferase GCN5 4991100 10066884 Rpdx1_4648 Rhodopseudomonas palustris DX-1 N-acetyltransferase GCN5 YP_004110928.1 4990597 D 652103 CDS YP_004110929.1 316935947 10066890 4997545..4999578 1 NC_014834.1 PFAM: Peptidase M23; KEGG: bbt:BBta_1196 putative metalloendopeptidase; peptidase M23 4999578 10066890 Rpdx1_4649 Rhodopseudomonas palustris DX-1 peptidase M23 YP_004110929.1 4997545 D 652103 CDS YP_004110930.1 316935948 10066891 4999729..5001357 1 NC_014834.1 PFAM: NHL repeat containing protein; KEGG: bja:bll1406 hypothetical protein; NHL repeat containing protein 5001357 10066891 Rpdx1_4650 Rhodopseudomonas palustris DX-1 NHL repeat containing protein YP_004110930.1 4999729 D 652103 CDS YP_004110931.1 316935949 10066892 complement(5001508..5004147) 1 NC_014834.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: bbt:BBta_1195 chaperone; SMART: AAA ATPase; ATP-dependent chaperone ClpB 5004147 10066892 Rpdx1_4651 Rhodopseudomonas palustris DX-1 ATP-dependent chaperone ClpB YP_004110931.1 5001508 R 652103 CDS YP_004110932.1 316935950 10066893 5004373..5005161 1 NC_014834.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; KEGG: nha:Nham_0680 hypothetical protein; MOSC domain-containing protein 5005161 10066893 Rpdx1_4652 Rhodopseudomonas palustris DX-1 MOSC domain-containing protein YP_004110932.1 5004373 D 652103 CDS YP_004110933.1 316935951 10066894 complement(5005219..5005965) 1 NC_014834.1 KEGG: oca:OCAR_4778 putative conserved hypothetical protein; hypothetical protein 5005965 10066894 Rpdx1_4653 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110933.1 5005219 R 652103 CDS YP_004110934.1 316935952 10066895 complement(5006188..5006883) 1 NC_014834.1 KEGG: nwi:Nwi_0586 methionine biosynthesis MetW; TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; methionine biosynthesis protein MetW 5006883 10066895 Rpdx1_4654 Rhodopseudomonas palustris DX-1 methionine biosynthesis protein MetW YP_004110934.1 5006188 R 652103 CDS YP_004110935.1 316935953 10066896 complement(5006886..5008085) 1 NC_014834.1 TIGRFAM: homoserine O-acetyltransferase; KEGG: bbt:BBta_1186 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase 5008085 10066896 Rpdx1_4655 Rhodopseudomonas palustris DX-1 homoserine O-acetyltransferase YP_004110935.1 5006886 R 652103 CDS YP_004110936.1 316935954 10066897 5008576..5009421 1 NC_014834.1 PFAM: Chorismate mutase, type II; KEGG: bja:bll1398 hypothetical protein; chorismate mutase 5009421 10066897 Rpdx1_4656 Rhodopseudomonas palustris DX-1 chorismate mutase YP_004110936.1 5008576 D 652103 CDS YP_004110937.1 316935955 10066898 5009465..5010562 1 NC_014834.1 KEGG: bbt:BBta_1183 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase 5010562 10066898 Rpdx1_4657 Rhodopseudomonas palustris DX-1 histidinol-phosphate aminotransferase YP_004110937.1 5009465 D 652103 CDS YP_004110938.1 316935956 10066899 5010559..5011500 1 NC_014834.1 KEGG: nwi:Nwi_0582 cyclohexadienyl dehydrogenase; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 5011500 10066899 Rpdx1_4658 Rhodopseudomonas palustris DX-1 prephenate dehydrogenase YP_004110938.1 5010559 D 652103 CDS YP_004110939.1 316935957 10066900 complement(5011651..5012631) 1 NC_014834.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: nha:Nham_0762 Mg2+ transporter protein, CorA-like; Mg2 transporter protein CorA family protein 5012631 10066900 Rpdx1_4659 Rhodopseudomonas palustris DX-1 Mg2 transporter protein CorA family protein YP_004110939.1 5011651 R 652103 CDS YP_004110940.1 316935958 10066901 5012978..5013664 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: oca:OCAR_6915 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 5013664 10066901 Rpdx1_4660 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004110940.1 5012978 D 652103 CDS YP_004110941.1 316935959 10066902 complement(5013955..5015025) 1 NC_014834.1 PFAM: Extensin family protein; KEGG: nha:Nham_0760 extensin-like; extensin family protein 5015025 10066902 Rpdx1_4661 Rhodopseudomonas palustris DX-1 extensin family protein YP_004110941.1 5013955 R 652103 CDS YP_004110942.1 316935960 10066903 5015143..5016771 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bra:BRADO2140 putative acyl-CoA synthetase; AMP-dependent synthetase and ligase 5016771 10066903 Rpdx1_4662 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110942.1 5015143 D 652103 CDS YP_004110943.1 316935961 10066904 5017006..5017845 1 NC_014834.1 KEGG: nha:Nham_0755 hypothetical protein; hypothetical protein 5017845 10066904 Rpdx1_4663 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110943.1 5017006 D 652103 CDS YP_004110944.1 316935962 10066905 complement(5017894..5018193) 1 NC_014834.1 KEGG: dma:DMR_10690 hypothetical protein; hypothetical protein 5018193 10066905 Rpdx1_4664 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110944.1 5017894 R 652103 CDS YP_004110945.1 316935963 10066906 complement(5018278..5018721) 1 NC_014834.1 KEGG: rce:RC1_3901 hypothetical protein; hypothetical protein 5018721 10066906 Rpdx1_4665 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110945.1 5018278 R 652103 CDS YP_004110946.1 316935964 10066907 complement(5018718..5019137) 1 NC_014834.1 KEGG: pzu:PHZ_c2683 hypothetical protein; hypothetical protein 5019137 10066907 Rpdx1_4666 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110946.1 5018718 R 652103 CDS YP_004110947.1 316935965 10066908 complement(5019134..5019697) 1 NC_014834.1 KEGG: azl:AZL_d04490 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 5019697 10066908 Rpdx1_4667 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004110947.1 5019134 R 652103 CDS YP_004110948.1 316935966 10066909 complement(5019765..5020112) 1 NC_014834.1 KEGG: dse:Dsec_GM24424 GM24424 gene product from transcript GM24424-RA; hypothetical protein 5020112 10066909 Rpdx1_4668 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110948.1 5019765 R 652103 CDS YP_004110949.1 316935967 10066910 5020654..5022345 1 NC_014834.1 KEGG: bra:BRADO2557 putative methyl-accepting chemotaxis receptor/sensory transducer; PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; Cache sensor containing methyl-accepting chemotaxis sensory transducer 5022345 10066910 Rpdx1_4669 Rhodopseudomonas palustris DX-1 Cache sensor containing methyl-accepting chemotaxis sensory transducer YP_004110949.1 5020654 D 652103 CDS YP_004110950.1 316935968 10066911 5022567..5024162 1 NC_014834.1 KEGG: bja:bll5850 hypothetical protein; hypothetical protein 5024162 10066911 Rpdx1_4670 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110950.1 5022567 D 652103 CDS YP_004110951.1 316935969 10066912 5024152..5025387 1 NC_014834.1 KEGG: bja:bll5849 hypothetical protein; hypothetical protein 5025387 10066912 Rpdx1_4671 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110951.1 5024152 D 652103 CDS YP_004110952.1 316935970 10066913 5025384..5026862 1 NC_014834.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: nha:Nham_1334 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 5026862 10066913 Rpdx1_4672 Rhodopseudomonas palustris DX-1 pyridoxal-dependent decarboxylase YP_004110952.1 5025384 D 652103 CDS YP_004110953.1 316935971 10066914 complement(5026943..5027770) 1 NC_014834.1 PFAM: metallophosphoesterase; KEGG: nha:Nham_3527 hypothetical protein; metallophosphoesterase 5027770 10066914 Rpdx1_4673 Rhodopseudomonas palustris DX-1 metallophosphoesterase YP_004110953.1 5026943 R 652103 CDS YP_004110954.1 316935972 10066915 complement(5027772..5028365) 1 NC_014834.1 KEGG: bra:BRADO1138 antifreeze protein, type I: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 5028365 10066915 Rpdx1_4674 Rhodopseudomonas palustris DX-1 5-formyltetrahydrofolate cyclo-ligase YP_004110954.1 5027772 R 652103 CDS YP_004110955.1 316935973 10066917 5028764..5029228 1 NC_014834.1 KEGG: bra:BRADO4648 hypothetical protein; hypothetical protein 5029228 10066917 Rpdx1_4675 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110955.1 5028764 D 652103 CDS YP_004110956.1 316935974 10066918 complement(5029241..5029420) 1 NC_014834.1 KEGG: aau:AAur_pTC20031 cadmium-translocating P-type ATPase; cadmium-translocating P-type ATPase 5029420 10066918 Rpdx1_4676 Rhodopseudomonas palustris DX-1 cadmium-translocating P-type ATPase YP_004110956.1 5029241 R 652103 CDS YP_004110957.1 316935975 10066919 5029503..5030048 1 NC_014834.1 KEGG: hoh:Hoch_3149 ATP-dependent DNA helicase, RecQ family; RecQ family ATP-dependent DNA helicase 5030048 10066919 Rpdx1_4677 Rhodopseudomonas palustris DX-1 RecQ family ATP-dependent DNA helicase YP_004110957.1 5029503 D 652103 CDS YP_004110958.1 316935976 10066920 complement(5030265..5030654) 1 NC_014834.1 KEGG: bbt:BBta_6071 putative rhodanese-related sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; rhodanese domain-containing protein 5030654 10066920 Rpdx1_4678 Rhodopseudomonas palustris DX-1 rhodanese domain-containing protein YP_004110958.1 5030265 R 652103 CDS YP_004110959.1 316935977 10066921 complement(5030677..5031153) 1 NC_014834.1 KEGG: sme:SMc01259 hypothetical protein; hypothetical protein 5031153 10066921 Rpdx1_4679 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110959.1 5030677 R 652103 CDS YP_004110960.1 316935978 10066922 complement(5031262..5031567) 1 NC_014834.1 KEGG: tgr:Tgr7_3247 hypothetical protein; hypothetical protein 5031567 10066922 Rpdx1_4680 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110960.1 5031262 R 652103 CDS YP_004110961.1 316935979 10066923 complement(5031564..5034653) 1 NC_014834.1 KEGG: slt:Slit_1971 heavy metal efflux pump, CzcA family; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump 5034653 10066923 Rpdx1_4681 Rhodopseudomonas palustris DX-1 CzcA family heavy metal efflux pump YP_004110961.1 5031564 R 652103 CDS YP_004110962.1 316935980 10066924 complement(5034654..5035760) 1 NC_014834.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rcu:RCOM_0389620 Cobalt-zinc-cadmium resistance protein czcB, putative; RND family efflux transporter MFP subunit 5035760 10066924 Rpdx1_4682 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004110962.1 5034654 R 652103 CDS YP_004110963.1 316935981 10066925 complement(5035977..5037299) 1 NC_014834.1 KEGG: bja:blr2976 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5037299 10066925 Rpdx1_4683 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004110963.1 5035977 R 652103 CDS YP_004110964.1 316935982 10066926 complement(5037262..5037798) 1 NC_014834.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: azl:AZL_007490 chemotaxis sensory transducer; SMART: PAS domain containing protein; PAS sensor protein 5037798 10066926 Rpdx1_4684 Rhodopseudomonas palustris DX-1 PAS sensor protein YP_004110964.1 5037262 R 652103 CDS YP_004110965.1 316935983 10066927 complement(5037966..5039288) 1 NC_014834.1 KEGG: bja:blr2976 putative methyl accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5039288 10066927 Rpdx1_4685 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004110965.1 5037966 R 652103 CDS YP_004110966.1 316935984 10066928 complement(5039251..5039784) 1 NC_014834.1 KEGG: azl:AZL_007490 chemotaxis sensory transducer; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS sensor protein 5039784 10066928 Rpdx1_4686 Rhodopseudomonas palustris DX-1 PAS sensor protein YP_004110966.1 5039251 R 652103 CDS YP_004110967.1 316935985 10066929 complement(5039990..5041123) 1 NC_014834.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: oca:OCAR_6982 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; A/G-specific adenine glycosylase 5041123 10066929 Rpdx1_4687 Rhodopseudomonas palustris DX-1 A/G-specific adenine glycosylase YP_004110967.1 5039990 R 652103 CDS YP_004110968.1 316935986 10066930 5041152..5041631 1 NC_014834.1 PFAM: protein of unknown function DUF721; KEGG: nha:Nham_3228 hypothetical protein; hypothetical protein 5041631 10066930 Rpdx1_4688 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110968.1 5041152 D 652103 CDS YP_004110969.1 316935987 10066931 5041776..5042450 1 NC_014834.1 PFAM: DSBA oxidoreductase; KEGG: bra:BRADO2001 hypothetical protein; DSBA oxidoreductase 5042450 10066931 Rpdx1_4689 Rhodopseudomonas palustris DX-1 DSBA oxidoreductase YP_004110969.1 5041776 D 652103 CDS YP_004110970.1 316935988 10066932 5043319..5044581 1 NC_014834.1 KEGG: xau:Xaut_0814 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 5044581 10066932 Rpdx1_4690 Rhodopseudomonas palustris DX-1 helix-turn-helix domain-containing protein YP_004110970.1 5043319 D 652103 CDS YP_004110971.1 316935989 10066933 5044590..5045744 1 NC_014834.1 KEGG: pla:Plav_0387 hypothetical protein; hypothetical protein 5045744 10066933 Rpdx1_4691 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110971.1 5044590 D 652103 CDS YP_004110972.1 316935990 10066934 5045975..5049439 1 NC_014834.1 KEGG: bja:bll2496 chromosome segregation protein; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; chromosome segregation protein SMC 5049439 10066934 Rpdx1_4692 Rhodopseudomonas palustris DX-1 chromosome segregation protein SMC YP_004110972.1 5045975 D 652103 CDS YP_004110973.1 316935991 10066935 5049538..5050515 1 NC_014834.1 PFAM: Ribosomal small subunit Rsm22; KEGG: nha:Nham_3231 methyltransferase type 12; Ribosomal small subunit Rsm22 5050515 10066935 Rpdx1_4693 Rhodopseudomonas palustris DX-1 Ribosomal small subunit Rsm22 YP_004110973.1 5049538 D 652103 CDS YP_004110974.1 316935992 10066936 5050631..5051182 1 NC_014834.1 PFAM: LemA family protein; KEGG: oca:OCAR_6988 LemA; LemA family protein 5051182 10066936 Rpdx1_4694 Rhodopseudomonas palustris DX-1 LemA family protein YP_004110974.1 5050631 D 652103 CDS YP_004110975.1 316935993 10066937 5051342..5052520 1 NC_014834.1 PFAM: peptidase M48 Ste24p; KEGG: bbt:BBta_2314 putative protease HtpX; peptidase M48 Ste24p 5052520 10066937 Rpdx1_4695 Rhodopseudomonas palustris DX-1 peptidase M48 Ste24p YP_004110975.1 5051342 D 652103 CDS YP_004110976.1 316935994 10066938 5052700..5053473 1 NC_014834.1 KEGG: bja:bll2492 hypothetical protein; hypothetical protein 5053473 10066938 Rpdx1_4696 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110976.1 5052700 D 652103 CDS YP_004110977.1 316935995 10066939 5053532..5054197 1 NC_014834.1 KEGG: nha:Nham_3236 hypothetical protein; hypothetical protein 5054197 10066939 Rpdx1_4697 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110977.1 5053532 D 652103 CDS YP_004110978.1 316935996 10066940 complement(5054417..5054962) 1 NC_014834.1 KEGG: nwi:Nwi_2613 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase 5054962 10066940 Rpdx1_4698 Rhodopseudomonas palustris DX-1 adenine phosphoribosyltransferase YP_004110978.1 5054417 R 652103 CDS YP_004110979.1 316935997 10066941 complement(5055116..5057275) 1 NC_014834.1 KEGG: bbt:BBta_2309 anthranilate synthase; TIGRFAM: anthranilate synthase; glutamine amidotransferase of anthranilate synthase; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; glutamine amidotransferase class-I; anthranilate synthase 5057275 10066941 Rpdx1_4699 Rhodopseudomonas palustris DX-1 anthranilate synthase YP_004110979.1 5055116 R 652103 CDS YP_004110980.1 316935998 10066942 5057571..5057765 1 NC_014834.1 PFAM: YcfA family protein; KEGG: dae:Dtox_3658 YcfA family protein; hypothetical protein 5057765 10066942 Rpdx1_4700 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110980.1 5057571 D 652103 CDS YP_004110981.1 316935999 10066943 5057765..5057971 1 NC_014834.1 PFAM: protein of unknown function UPF0150; KEGG: mpo:Mpop_3129 protein of unknown function UPF0150; hypothetical protein 5057971 10066943 Rpdx1_4701 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110981.1 5057765 D 652103 CDS YP_004110982.1 316936000 10066944 complement(5058047..5058667) 1 NC_014834.1 PFAM: Methyltransferase type 11; KEGG: rsq:Rsph17025_3983 hypothetical protein; type 11 methyltransferase 5058667 10066944 Rpdx1_4702 Rhodopseudomonas palustris DX-1 type 11 methyltransferase YP_004110982.1 5058047 R 652103 CDS YP_004110983.1 316936001 10066945 complement(5058691..5060013) 1 NC_014834.1 PFAM: ABC-1 domain protein; KEGG: ABC-1 domain-containing protein; ABC-1 domain-containing protein 5060013 10066945 Rpdx1_4703 Rhodopseudomonas palustris DX-1 ABC-1 domain-containing protein YP_004110983.1 5058691 R 652103 CDS YP_004110984.1 316936002 10066946 5060473..5060649 1 NC_014834.1 KEGG: bbt:BBta_1659 hypothetical protein; hypothetical protein 5060649 10066946 Rpdx1_4704 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110984.1 5060473 D 652103 CDS YP_004110985.1 316936003 10066947 complement(5060670..5060888) 1 NC_014834.1 PFAM: PhnA protein; KEGG: rhi:NGR_c07170 PhnA-like protein; PhnA protein 5060888 10066947 Rpdx1_4705 Rhodopseudomonas palustris DX-1 PhnA protein YP_004110985.1 5060670 R 652103 CDS YP_004110986.1 316936004 10066948 complement(5061024..5061713) 1 NC_014834.1 PFAM: OmpW family protein; KEGG: bbt:BBta_0946 putative outer membrane protein precursor of unknown function; OmpW family protein 5061713 10066948 Rpdx1_4706 Rhodopseudomonas palustris DX-1 OmpW family protein YP_004110986.1 5061024 R 652103 CDS YP_004110987.1 316936005 10066949 complement(5061942..5062202) 1 NC_014834.1 KEGG: bja:bsr1310 hypothetical protein; hypothetical protein 5062202 10066949 Rpdx1_4707 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110987.1 5061942 R 652103 CDS YP_004110988.1 316936006 10066950 complement(5062387..5064297) 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_0943 putative propionate--CoA ligase; AMP-dependent synthetase and ligase 5064297 10066950 Rpdx1_4708 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004110988.1 5062387 R 652103 CDS YP_004110989.1 316936007 10066951 complement(5064478..5065236) 1 NC_014834.1 KEGG: bbt:BBta_0942 hypothetical protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; hypothetical protein 5065236 10066951 Rpdx1_4709 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110989.1 5064478 R 652103 CDS YP_004110990.1 316936008 10066952 complement(5065472..5066275) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr1304 dehydrogenase; short-chain dehydrogenase/reductase SDR 5066275 10066952 Rpdx1_4710 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004110990.1 5065472 R 652103 CDS YP_004110991.1 316936009 10066953 complement(5066374..5068149) 1 NC_014834.1 KEGG: azc:AZC_3721 elongator protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 5068149 10066953 Rpdx1_4711 Rhodopseudomonas palustris DX-1 radical SAM protein YP_004110991.1 5066374 R 652103 CDS YP_004110992.1 316936010 10066954 complement(5068298..5068672) 1 NC_014834.1 PFAM: Domain of unknown function DUF1850; KEGG: bja:blr1303 hypothetical protein; hypothetical protein 5068672 10066954 Rpdx1_4712 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110992.1 5068298 R 652103 CDS YP_004110993.1 316936011 10066955 complement(5068669..5070789) 1 NC_014834.1 KEGG: bra:BRADO6597 C4-dicarboxylate transporter; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter 5070789 10066955 Rpdx1_4713 Rhodopseudomonas palustris DX-1 TRAP transporter YP_004110993.1 5068669 R 652103 CDS YP_004110994.1 316936012 10066956 complement(5070940..5071887) 1 NC_014834.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:blr1301 immunogenic protein precursor; TAXI family TRAP transporter solute receptor 5071887 10066956 Rpdx1_4714 Rhodopseudomonas palustris DX-1 TAXI family TRAP transporter solute receptor YP_004110994.1 5070940 R 652103 CDS YP_004110995.1 316936013 10066957 5072039..5073286 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: azl:AZL_009150 major facilitator superfamily MFS-1; major facilitator superfamily protein 5073286 10066957 Rpdx1_4715 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004110995.1 5072039 D 652103 CDS YP_004110996.1 316936014 10066958 complement(5073332..5073694) 1 NC_014834.1 KEGG: rsq:Rsph17025_3337 hypothetical protein; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver 5073694 10066958 Rpdx1_4716 Rhodopseudomonas palustris DX-1 response regulator receiver YP_004110996.1 5073332 R 652103 CDS YP_004110997.1 316936015 10066959 complement(5073698..5074702) 1 NC_014834.1 PFAM: PAS fold-4 domain protein; HWE histidine kinase; KEGG: rsp:RSP_1628 sensor histidine protein kinase; signal transduction histidine kinase 5074702 10066959 Rpdx1_4717 Rhodopseudomonas palustris DX-1 signal transduction histidine kinase YP_004110997.1 5073698 R 652103 CDS YP_004110998.1 316936016 10066960 5074850..5076451 1 NC_014834.1 KEGG: rce:RC1_0246 alkaline phosphatase D; alkaline phosphatase 5076451 10066960 Rpdx1_4718 Rhodopseudomonas palustris DX-1 alkaline phosphatase YP_004110998.1 5074850 D 652103 CDS YP_004110999.1 316936017 10066961 5076607..5077614 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: vei:Veis_4511 hypothetical protein; hypothetical protein 5077614 10066961 Rpdx1_4719 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004110999.1 5076607 D 652103 CDS YP_004111000.1 316936018 10066962 5077854..5079068 1 NC_014834.1 KEGG: bja:blr0402 two-component response regulator; PFAM: EAL domain protein; response regulator receiver; SMART: EAL domain protein; response regulator receiver modulated diguanylate phosphodiesterase 5079068 10066962 Rpdx1_4720 Rhodopseudomonas palustris DX-1 response regulator receiver modulated diguanylate phosphodiesterase YP_004111000.1 5077854 D 652103 CDS YP_004111001.1 316936019 10066963 complement(5079097..5079594) 1 NC_014834.1 KEGG: bja:blr1300 hypothetical protein; hypothetical protein 5079594 10066963 Rpdx1_4721 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111001.1 5079097 R 652103 CDS YP_004111002.1 316936020 10066964 5079838..5080140 1 NC_014834.1 KEGG: bja:bll1299 hypothetical protein; hypothetical protein 5080140 10066964 Rpdx1_4722 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111002.1 5079838 D 652103 CDS YP_004111003.1 316936021 10066965 complement(5080160..5081371) 1 NC_014834.1 KEGG: nwi:Nwi_0278 hypothetical protein; hypothetical protein 5081371 10066965 Rpdx1_4723 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111003.1 5080160 R 652103 CDS YP_004111004.1 316936022 10066966 complement(5081503..5082129) 1 NC_014834.1 PFAM: NUDIX hydrolase; KEGG: bja:blr1297 hypothetical protein; NUDIX hydrolase 5082129 10066966 Rpdx1_4724 Rhodopseudomonas palustris DX-1 NUDIX hydrolase YP_004111004.1 5081503 R 652103 CDS YP_004111005.1 316936023 10066967 5082216..5082641 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bja:bll1296 hypothetical protein; thioesterase superfamily protein 5082641 10066967 Rpdx1_4725 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004111005.1 5082216 D 652103 CDS YP_004111006.1 316936024 10066968 complement(5082657..5083403) 1 NC_014834.1 KEGG: mrd:Mrad2831_3556 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 5083403 10066968 Rpdx1_4726 Rhodopseudomonas palustris DX-1 HAD-superfamily hydrolase YP_004111006.1 5082657 R 652103 CDS YP_004111007.1 316936025 10066969 complement(5083737..5084105) 1 NC_014834.1 KEGG: bbt:BBta_3939 putative two-component response regulatory protein, response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 5084105 10066969 Rpdx1_4727 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004111007.1 5083737 R 652103 CDS YP_004111008.1 316936026 10066970 complement(5084507..5085994) 1 NC_014834.1 KEGG: bbt:BBta_6050 putative sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 5085994 10066970 Rpdx1_4728 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004111008.1 5084507 R 652103 CDS YP_004111009.1 316936027 10066972 complement(5086378..5086572) 1 NC_014834.1 PFAM: protein of unknown function DUF329; KEGG: nwi:Nwi_0276 zinc-binding protein; hypothetical protein 5086572 10066972 Rpdx1_4729 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111009.1 5086378 R 652103 CDS YP_004111010.1 316936028 10066973 complement(5086550..5087173) 1 NC_014834.1 KEGG: bja:blr1259 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein; maf protein 5087173 10066973 Rpdx1_4730 Rhodopseudomonas palustris DX-1 maf protein YP_004111010.1 5086550 R 652103 CDS YP_004111011.1 316936029 10066974 complement(5087270..5088559) 1 NC_014834.1 KEGG: hoh:Hoch_1691 SMC domain protein; SMC domain-containing protein 5088559 10066974 Rpdx1_4731 Rhodopseudomonas palustris DX-1 SMC domain-containing protein YP_004111011.1 5087270 R 652103 CDS YP_004111012.1 316936030 10066975 complement(5088747..5089214) 1 NC_014834.1 KEGG: bra:BRADO6635 putative arsenate reductase (ArsC-like); PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein-tyrosine phosphatase, low molecular weight 5089214 10066975 Rpdx1_4732 Rhodopseudomonas palustris DX-1 protein-tyrosine phosphatase, low molecular weight YP_004111012.1 5088747 R 652103 CDS YP_004111013.1 316936031 10066976 complement(5089270..5089761) 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_0248 hypothetical protein; hypothetical protein 5089761 10066976 Rpdx1_4733 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111013.1 5089270 R 652103 CDS YP_004111014.1 316936032 10066977 complement(5089758..5091053) 1 NC_014834.1 TIGRFAM: histidinol dehydrogenase; KEGG: bja:blr1256 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase 5091053 10066977 Rpdx1_4734 Rhodopseudomonas palustris DX-1 histidinol dehydrogenase YP_004111014.1 5089758 R 652103 CDS YP_004111015.1 316936033 10066978 complement(5091183..5091632) 1 NC_014834.1 KEGG: bra:BRADO6638 hypothetical protein; hypothetical protein 5091632 10066978 Rpdx1_4735 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111015.1 5091183 R 652103 CDS YP_004111016.1 316936034 10066979 complement(5091652..5092941) 1 NC_014834.1 KEGG: nha:Nham_0285 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5092941 10066979 Rpdx1_4736 Rhodopseudomonas palustris DX-1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004111016.1 5091652 R 652103 CDS YP_004111017.1 316936035 10066980 complement(5093100..5093390) 1 NC_014834.1 KEGG: nha:Nham_0415 hypothetical protein; hypothetical protein 5093390 10066980 Rpdx1_4737 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111017.1 5093100 R 652103 CDS YP_004111018.1 316936036 10066981 5093630..5093926 1 NC_014834.1 KEGG: hla:Hlac_0776 hypothetical protein; hypothetical protein 5093926 10066981 Rpdx1_4738 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111018.1 5093630 D 652103 CDS YP_004111019.1 316936037 10066982 complement(5094132..5094341) 1 NC_014834.1 manually curated; KEGG: bra:BRADO6641 hypothetical protein; hypothetical protein 5094341 10066982 Rpdx1_4739 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111019.1 5094132 R 652103 CDS YP_004111020.1 316936038 10066983 5094416..5094862 1 NC_014834.1 KEGG: reu:Reut_B5593 hypothetical protein; hypothetical protein 5094862 10066983 Rpdx1_4740 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111020.1 5094416 D 652103 CDS YP_004111021.1 316936039 10066985 complement(5095294..5096460) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:bll6791 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 5096460 10066985 Rpdx1_4741 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004111021.1 5095294 R 652103 CDS YP_004111022.1 316936040 10066986 5096669..5097526 1 NC_014834.1 KEGG: bja:blr6797 putative citrate lyase; PFAM: HpcH/HpaI aldolase; citryl-coA lyase 5097526 10066986 Rpdx1_4742 Rhodopseudomonas palustris DX-1 citryl-coA lyase YP_004111022.1 5096669 D 652103 CDS YP_004111023.1 316936041 10066987 complement(5097542..5098606) 1 NC_014834.1 PFAM: IMP dehydrogenase/GMP reductase; KEGG: azl:AZL_e03110 GMP reductase; IMP dehydrogenase/GMP reductase 5098606 10066987 Rpdx1_4743 Rhodopseudomonas palustris DX-1 IMP dehydrogenase/GMP reductase YP_004111023.1 5097542 R 652103 CDS YP_004111024.1 316936042 10066988 5098673..5099578 1 NC_014834.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: oca:OCAR_5052 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 5099578 10066988 Rpdx1_4744 Rhodopseudomonas palustris DX-1 2-dehydropantoate 2-reductase YP_004111024.1 5098673 D 652103 CDS YP_004111025.1 316936043 10066989 complement(5099579..5100331) 1 NC_014834.1 KEGG: bra:BRADO2399 putative signal peptide; PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); nuclease 5100331 10066989 Rpdx1_4745 Rhodopseudomonas palustris DX-1 nuclease YP_004111025.1 5099579 R 652103 CDS YP_004111026.1 316936044 10066990 5100489..5101370 1 NC_014834.1 PFAM: thioesterase superfamily protein; KEGG: bja:blr7284 hypothetical protein; thioesterase superfamily protein 5101370 10066990 Rpdx1_4746 Rhodopseudomonas palustris DX-1 thioesterase superfamily protein YP_004111026.1 5100489 D 652103 CDS YP_004111027.1 316936045 10066991 5101561..5102763 1 NC_014834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bra:BRADO2426 putative diguanylate cyclase (GGDEF); SMART: GGDEF domain containing protein; diguanylate cyclase 5102763 10066991 Rpdx1_4747 Rhodopseudomonas palustris DX-1 diguanylate cyclase YP_004111027.1 5101561 D 652103 CDS YP_004111028.1 316936046 10066992 complement(5102764..5103960) 1 NC_014834.1 KEGG: pna:Pnap_3569 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 5103960 10066992 Rpdx1_4748 Rhodopseudomonas palustris DX-1 acetate kinase YP_004111028.1 5102764 R 652103 CDS YP_004111029.1 316936047 10066993 complement(5103957..5105372) 1 NC_014834.1 KEGG: cak:Caul_1955 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; phosphate acetyltransferase 5105372 10066993 Rpdx1_4749 Rhodopseudomonas palustris DX-1 phosphate acetyltransferase YP_004111029.1 5103957 R 652103 CDS YP_004111030.1 316936048 10066994 complement(5105397..5106158) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bte:BTH_II1698 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 5106158 10066994 Rpdx1_4750 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004111030.1 5105397 R 652103 CDS YP_004111031.1 316936049 10066995 complement(5106241..5107110) 1 NC_014834.1 PFAM: protein of unknown function DUF344; KEGG: rfr:Rfer_4046 hypothetical protein; hypothetical protein 5107110 10066995 Rpdx1_4751 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111031.1 5106241 R 652103 CDS YP_004111032.1 316936050 10066996 5107483..5108865 1 NC_014834.1 KEGG: nha:Nham_2580 hypothetical protein; hypothetical protein 5108865 10066996 Rpdx1_4752 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111032.1 5107483 D 652103 CDS YP_004111033.1 316936051 10066997 complement(5108982..5109392) 1 NC_014834.1 PFAM: BA14K family protein; KEGG: nha:Nham_0272 hypothetical protein; BA14K family protein 5109392 10066997 Rpdx1_4753 Rhodopseudomonas palustris DX-1 BA14K family protein YP_004111033.1 5108982 R 652103 CDS YP_004111034.1 316936052 10066998 5109868..5112090 1 NC_014834.1 KEGG: ppd:Ppro_3271 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase 5112090 10066998 Rpdx1_4754 Rhodopseudomonas palustris DX-1 alpha,alpha-trehalose-phosphate synthase YP_004111034.1 5109868 D 652103 CDS YP_004111035.1 316936053 10066999 complement(5112186..5113493) 1 NC_014834.1 PFAM: Protein of unknown function DUF2254, membrane; KEGG: mch:Mchl_3348 formate C-acetyltransferase glycine radical; hypothetical protein 5113493 10066999 Rpdx1_4755 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111035.1 5112186 R 652103 CDS YP_004111036.1 316936054 10067000 complement(5113801..5115357) 1 NC_014834.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: bja:blr2591 serine protease DO-like protease; SMART: PDZ/DHR/GLGF domain protein; protease Do 5115357 10067000 Rpdx1_4756 Rhodopseudomonas palustris DX-1 protease Do YP_004111036.1 5113801 R 652103 CDS YP_004111037.1 316936055 10067001 complement(5115596..5116084) 1 NC_014834.1 KEGG: bid:Bind_2062 hypothetical protein; hypothetical protein 5116084 10067001 Rpdx1_4757 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111037.1 5115596 R 652103 CDS YP_004111038.1 316936056 10067002 complement(5116193..5116477) 1 NC_014834.1 KEGG: nha:Nham_1414 hypothetical protein; hypothetical protein 5116477 10067002 Rpdx1_4758 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111038.1 5116193 R 652103 CDS YP_004111039.1 316936057 10067003 5116637..5118202 1 NC_014834.1 KEGG: bja:blr6155 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5118202 10067003 Rpdx1_4759 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004111039.1 5116637 D 652103 CDS YP_004111040.1 316936058 10067004 5118186..5119277 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bra:BRADO1746 ABC transporter permease; inner-membrane translocator 5119277 10067004 Rpdx1_4760 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004111040.1 5118186 D 652103 CDS YP_004111041.1 316936059 10067005 5119264..5120181 1 NC_014834.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_2058 ABC transporter permease; inner-membrane translocator 5120181 10067005 Rpdx1_4761 Rhodopseudomonas palustris DX-1 inner-membrane translocator YP_004111041.1 5119264 D 652103 CDS YP_004111042.1 316936060 10067006 5120260..5121348 1 NC_014834.1 PFAM: basic membrane lipoprotein; KEGG: bbt:BBta_2057 putative ABC transporter (substrate-binding protein); basic membrane lipoprotein 5121348 10067006 Rpdx1_4762 Rhodopseudomonas palustris DX-1 basic membrane lipoprotein YP_004111042.1 5120260 D 652103 CDS YP_004111043.1 316936061 10067007 complement(5121563..5122528) 1 NC_014834.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: nha:Nham_3491 PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein 5122528 10067007 Rpdx1_4763 Rhodopseudomonas palustris DX-1 PDZ/DHR/GLGF domain-containing protein YP_004111043.1 5121563 R 652103 CDS YP_004111044.1 316936062 10067009 5123174..5124439 1 NC_014834.1 KEGG: oca:OCAR_5669 LpsH; hypothetical protein 5124439 10067009 Rpdx1_4765 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111044.1 5123174 D 652103 CDS YP_004111045.1 316936063 10067010 5124468..5125451 1 NC_014834.1 KEGG: bid:Bind_1866 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 5125451 10067010 Rpdx1_4766 Rhodopseudomonas palustris DX-1 UDP-glucose 4-epimerase YP_004111045.1 5124468 D 652103 CDS YP_004111046.1 316936064 10067011 5125678..5126598 1 NC_014834.1 KEGG: bja:blr7577 UDP-hexose transferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase 5126598 10067011 Rpdx1_4767 Rhodopseudomonas palustris DX-1 WecB/TagA/CpsF family glycosyl transferase YP_004111046.1 5125678 D 652103 CDS YP_004111047.1 316936065 10067012 complement(5126602..5127636) 1 NC_014834.1 PFAM: glycoside hydrolase family 5; KEGG: bja:blr3367 cellulase; glycoside hydrolase family protein 5127636 10067012 Rpdx1_4768 Rhodopseudomonas palustris DX-1 glycoside hydrolase family protein YP_004111047.1 5126602 R 652103 CDS YP_004111048.1 316936066 10067013 complement(5127630..5128919) 1 NC_014834.1 PFAM: O-antigen polymerase; KEGG: bja:blr3366 hypothetical protein; O-antigen polymerase 5128919 10067013 Rpdx1_4769 Rhodopseudomonas palustris DX-1 O-antigen polymerase YP_004111048.1 5127630 R 652103 CDS YP_004111049.1 316936067 10067014 complement(5129024..5131141) 1 NC_014834.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bja:blr3362 hypothetical protein; lipopolysaccharide biosynthesis protein 5131141 10067014 Rpdx1_4770 Rhodopseudomonas palustris DX-1 lipopolysaccharide biosynthesis protein YP_004111049.1 5129024 R 652103 CDS YP_004111050.1 316936068 10067015 5131424..5132620 1 NC_014834.1 PFAM: glycosyl transferase group 1; KEGG: bja:bll3361 glycosyl transferase; glycosyl transferase group 1 protein 5132620 10067015 Rpdx1_4771 Rhodopseudomonas palustris DX-1 glycosyl transferase group 1 protein YP_004111050.1 5131424 D 652103 CDS YP_004111051.1 316936069 10067016 5132647..5134176 1 NC_014834.1 KEGG: bja:bll3360 hypothetical protein; hypothetical protein 5134176 10067016 Rpdx1_4772 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111051.1 5132647 D 652103 CDS YP_004111052.1 316936070 10067017 complement(5134196..5134555) 1 NC_014834.1 KEGG: rhi:NGR_b19050 hypothetical protein; hypothetical protein 5134555 10067017 Rpdx1_4773 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111052.1 5134196 R 652103 CDS YP_004111053.1 316936071 10067018 5134817..5136169 1 NC_014834.1 KEGG: bja:bll3363 hypothetical protein; manually curated; PFAM: polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 5136169 10067018 Rpdx1_4774 Rhodopseudomonas palustris DX-1 polysaccharide biosynthesis protein YP_004111053.1 5134817 D 652103 CDS YP_004111054.1 316936072 10067019 complement(5136240..5137241) 1 NC_014834.1 KEGG: bja:bll0244 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase 5137241 10067019 Rpdx1_4775 Rhodopseudomonas palustris DX-1 homoserine O-succinyltransferase YP_004111054.1 5136240 R 652103 CDS YP_004111055.1 316936073 10067021 5137850..5138308 1 NC_014834.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: bra:BRADO0883 putative RmlC-like cupin family protein; hypothetical protein 5138308 10067021 Rpdx1_4777 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111055.1 5137850 D 652103 CDS YP_004111056.1 316936074 10067022 5138489..5139076 1 NC_014834.1 PFAM: Protein of unknown function DUF2478; KEGG: sit:TM1040_2053 3-dehydroquinate dehydratase; hypothetical protein 5139076 10067022 Rpdx1_4778 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111056.1 5138489 D 652103 CDS YP_004111057.1 316936075 10067023 complement(5139398..5139694) 1 NC_014834.1 KEGG: bra:BRADO5383 putative ferredoxin protein, FixX; putative ferredoxin protein, FixX 5139694 10067023 Rpdx1_4779 Rhodopseudomonas palustris DX-1 putative ferredoxin protein, FixX YP_004111057.1 5139398 R 652103 CDS YP_004111058.1 316936076 10067024 complement(5139728..5141035) 1 NC_014834.1 KEGG: bbt:BBta_5870 FixC protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; electron-transferring-flavoprotein dehydrogenase 5141035 10067024 Rpdx1_4780 Rhodopseudomonas palustris DX-1 electron-transferring-flavoprotein dehydrogenase YP_004111058.1 5139728 R 652103 CDS YP_004111059.1 316936077 10067025 complement(5141048..5142154) 1 NC_014834.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: bra:BRADO5385 protein FixB; electron transfer flavoprotein alpha chain; electron transfer flavoprotein subunit alpha 5142154 10067025 Rpdx1_4781 Rhodopseudomonas palustris DX-1 electron transfer flavoprotein subunit alpha YP_004111059.1 5141048 R 652103 CDS YP_004111060.1 316936078 10067026 complement(5142179..5143024) 1 NC_014834.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bbt:BBta_5872 protein FixA; electron transfer flavoprotein subunit alpha/beta 5143024 10067026 Rpdx1_4782 Rhodopseudomonas palustris DX-1 electron transfer flavoprotein subunit alpha/beta YP_004111060.1 5142179 R 652103 CDS YP_004111061.1 316936079 10067027 5143214..5143342 1 NC_014834.1 hypothetical protein 5143342 10067027 Rpdx1_4783 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111061.1 5143214 D 652103 CDS YP_004111062.1 316936080 10067028 complement(5143363..5143713) 1 NC_014834.1 PFAM: nitrogen fixation protein NifW; KEGG: bja:blr1771 nitrogenase stabilizing/protective protein; nitrogen fixation protein NifW 5143713 10067028 Rpdx1_4784 Rhodopseudomonas palustris DX-1 nitrogen fixation protein NifW YP_004111062.1 5143363 R 652103 CDS YP_004111063.1 316936081 10067029 complement(5143743..5144936) 1 NC_014834.1 KEGG: bra:BRADO5390 homocitrate synthase; TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; homocitrate synthase 5144936 10067029 Rpdx1_4785 Rhodopseudomonas palustris DX-1 homocitrate synthase YP_004111063.1 5143743 R 652103 CDS YP_004111064.1 316936082 10067030 complement(5144929..5146161) 1 NC_014834.1 TIGRFAM: cysteine desulfurase NifS; KEGG: met:M446_3581 cysteine desulfurase NifS; PFAM: aminotransferase class V; cysteine desulfurase NifS 5146161 10067030 Rpdx1_4786 Rhodopseudomonas palustris DX-1 cysteine desulfurase NifS YP_004111064.1 5144929 R 652103 CDS YP_004111065.1 316936083 10067031 complement(5146158..5147147) 1 NC_014834.1 KEGG: met:M446_3582 Fe-S cluster assembly protein NifU; TIGRFAM: Fe-S cluster assembly protein NifU; PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; Fe-S cluster assembly protein NifU 5147147 10067031 Rpdx1_4787 Rhodopseudomonas palustris DX-1 Fe-S cluster assembly protein NifU YP_004111065.1 5146158 R 652103 CDS YP_004111066.1 316936084 10067032 complement(5147175..5147495) 1 NC_014834.1 KEGG: mlo:mll5942 hypothetical protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein 5147495 10067032 Rpdx1_4788 Rhodopseudomonas palustris DX-1 iron-sulfur cluster assembly accessory protein YP_004111066.1 5147175 R 652103 CDS YP_004111067.1 316936085 10067033 complement(5147864..5148574) 1 NC_014834.1 PFAM: NifQ family protein; KEGG: bra:BRADO5393 putative nitrogen fixation protein NifQ; NifQ family protein 5148574 10067033 Rpdx1_4789 Rhodopseudomonas palustris DX-1 NifQ family protein YP_004111067.1 5147864 R 652103 CDS YP_004111068.1 316936086 10067034 complement(5148592..5148903) 1 NC_014834.1 TIGRFAM: ferredoxin III, nif-specific; KEGG: met:M446_3542 ferredoxin III, nif-specific; ferredoxin III 5148903 10067034 Rpdx1_4790 Rhodopseudomonas palustris DX-1 ferredoxin III YP_004111068.1 5148592 R 652103 CDS YP_004111069.1 316936087 10067035 complement(5148960..5149166) 1 NC_014834.1 PFAM: protein of unknown function DUF683; KEGG: met:M446_3541 hypothetical protein; hypothetical protein 5149166 10067035 Rpdx1_4791 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111069.1 5148960 R 652103 CDS YP_004111070.1 316936088 10067036 complement(5149184..5149648) 1 NC_014834.1 KEGG: bid:Bind_0479 nitrogen fixation protein; TIGRFAM: nitrogen fixation protein; PFAM: protein of unknown function DUF269; nitrogen fixation protein 5149648 10067036 Rpdx1_4792 Rhodopseudomonas palustris DX-1 nitrogen fixation protein YP_004111070.1 5149184 R 652103 CDS YP_004111071.1 316936089 10067037 complement(5149650..5150048) 1 NC_014834.1 KEGG: azc:AZC_1036 nitrogenase molybdenum-iron NifX protein; TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; nitrogen fixation protein NifX 5150048 10067037 Rpdx1_4793 Rhodopseudomonas palustris DX-1 nitrogen fixation protein NifX YP_004111071.1 5149650 R 652103 CDS YP_004111072.1 316936090 10067038 complement(5150104..5151477) 1 NC_014834.1 TIGRFAM: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; KEGG: mca:MCA0234 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 5151477 10067038 Rpdx1_4794 Rhodopseudomonas palustris DX-1 nitrogenase molybdenum-iron cofactor biosynthesis protein NifN YP_004111072.1 5150104 R 652103 CDS YP_004111073.1 316936091 10067039 complement(5151488..5152951) 1 NC_014834.1 KEGG: mca:MCA0233 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase MoFe cofactor biosynthesis protein NifE 5152951 10067039 Rpdx1_4795 Rhodopseudomonas palustris DX-1 nitrogenase MoFe cofactor biosynthesis protein NifE YP_004111073.1 5151488 R 652103 CDS YP_004111074.1 316936092 10067040 complement(5152990..5154549) 1 NC_014834.1 TIGRFAM: nitrogenase molybdenum-iron protein beta chain; KEGG: azc:AZC_1039 nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit beta 5154549 10067040 Rpdx1_4796 Rhodopseudomonas palustris DX-1 nitrogenase molybdenum-iron protein subunit beta YP_004111074.1 5152990 R 652103 CDS YP_004111075.1 316936093 10067041 complement(5154623..5156086) 1 NC_014834.1 TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; KEGG: msl:Msil_3631 nitrogenase molybdenum-iron protein alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase molybdenum-iron protein subunit alpha 5156086 10067041 Rpdx1_4797 Rhodopseudomonas palustris DX-1 nitrogenase molybdenum-iron protein subunit alpha YP_004111075.1 5154623 R 652103 CDS YP_004111076.1 316936094 10067042 complement(5156158..5157054) 1 NC_014834.1 TIGRFAM: nitrogenase iron protein; KEGG: met:M446_3534 nitrogenase reductase; PFAM: NifH/frxC-family protein; nitrogenase iron protein 5157054 10067042 Rpdx1_4798 Rhodopseudomonas palustris DX-1 nitrogenase iron protein YP_004111076.1 5156158 R 652103 CDS YP_004111077.1 316936095 10067043 complement(5157775..5158677) 1 NC_014834.1 KEGG: msl:Msil_3634 hypothetical protein; hypothetical protein 5158677 10067043 Rpdx1_4799 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111077.1 5157775 R 652103 CDS YP_004111078.1 316936096 10067044 complement(5158693..5158971) 1 NC_014834.1 KEGG: bid:Bind_0405 hypothetical protein; hypothetical protein 5158971 10067044 Rpdx1_4800 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111078.1 5158693 R 652103 CDS YP_004111079.1 316936097 10067045 complement(5158974..5159174) 1 NC_014834.1 KEGG: bxe:Bxe_B1454 nitrogen fixation protein; TIGRFAM: nitrogen fixation protein FixT; PFAM: NifT/FixU family protein; nitrogen fixation protein FixT 5159174 10067045 Rpdx1_4801 Rhodopseudomonas palustris DX-1 nitrogen fixation protein FixT YP_004111079.1 5158974 R 652103 CDS YP_004111080.1 316936098 10067046 complement(5159212..5159445) 1 NC_014834.1 PFAM: NifZ family protein; KEGG: msl:Msil_3640 NifZ family protein; NifZ family protein 5159445 10067046 Rpdx1_4802 Rhodopseudomonas palustris DX-1 NifZ family protein YP_004111080.1 5159212 R 652103 CDS YP_004111081.1 316936099 10067047 complement(5159445..5159744) 1 NC_014834.1 PFAM: NifZ family protein; KEGG: min:Minf_0458 NifZ domain; NifZ family protein 5159744 10067047 Rpdx1_4803 Rhodopseudomonas palustris DX-1 NifZ family protein YP_004111081.1 5159445 R 652103 CDS YP_004111082.1 316936100 10067048 complement(5159741..5160526) 1 NC_014834.1 PFAM: LRV FeS4 cluster domain protein; KEGG: azc:AZC_3418 hypothetical protein; LRV FeS4 cluster domain-containing protein 5160526 10067048 Rpdx1_4804 Rhodopseudomonas palustris DX-1 LRV FeS4 cluster domain-containing protein YP_004111082.1 5159741 R 652103 CDS YP_004111083.1 316936101 10067049 complement(5160516..5161055) 1 NC_014834.1 KEGG: xau:Xaut_0114 hypothetical protein; hypothetical protein 5161055 10067049 Rpdx1_4805 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111083.1 5160516 R 652103 CDS YP_004111084.1 316936102 10067050 complement(5161059..5161412) 1 NC_014834.1 KEGG: mca:MCA0206 HesB/YadR/YfhF family protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein 5161412 10067050 Rpdx1_4806 Rhodopseudomonas palustris DX-1 iron-sulfur cluster assembly accessory protein YP_004111084.1 5161059 R 652103 CDS YP_004111085.1 316936103 10067051 complement(5161423..5161644) 1 NC_014834.1 KEGG: bbt:BBta_5903 ferredoxin-like (in nif region); ferredoxin-like protein 5161644 10067051 Rpdx1_4807 Rhodopseudomonas palustris DX-1 ferredoxin-like protein YP_004111085.1 5161423 R 652103 CDS YP_004111086.1 316936104 10067052 complement(5161670..5163226) 1 NC_014834.1 KEGG: azc:AZC_3414 nitrogenase cofactor biosynthesis protein; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein; nitrogenase cofactor biosynthesis protein NifB 5163226 10067052 Rpdx1_4808 Rhodopseudomonas palustris DX-1 nitrogenase cofactor biosynthesis protein NifB YP_004111086.1 5161670 R 652103 CDS YP_004111087.1 316936105 10067053 complement(5163385..5163579) 1 NC_014834.1 KEGG: gdj:Gdia_1575 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 5163579 10067053 Rpdx1_4809 Rhodopseudomonas palustris DX-1 4Fe-4S ferredoxin YP_004111087.1 5163385 R 652103 CDS YP_004111088.1 316936106 10067054 complement(5163853..5165607) 1 NC_014834.1 TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; KEGG: bbt:BBta_5933 NifA subfamily transcriptional regulator; SMART: GAF domain protein; AAA ATPase; NifA subfamily transcriptional regulator 5165607 10067054 Rpdx1_4810 Rhodopseudomonas palustris DX-1 NifA subfamily transcriptional regulator YP_004111088.1 5163853 R 652103 CDS YP_004111089.1 316936107 10067055 complement(5165920..5166729) 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_5935 FixR protein; short-chain dehydrogenase/reductase SDR 5166729 10067055 Rpdx1_4811 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004111089.1 5165920 R 652103 CDS YP_004111090.1 316936108 10067056 5167074..5167928 1 NC_014834.1 KEGG: bbt:BBta_5936 hypothetical protein; hypothetical protein 5167928 10067056 Rpdx1_4812 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111090.1 5167074 D 652103 CDS YP_004111091.1 316936109 10067057 complement(5167985..5169865) 1 NC_014834.1 KEGG: bja:blr6523 putative iron transport protein; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; ferrous iron transport protein B 5169865 10067057 Rpdx1_4813 Rhodopseudomonas palustris DX-1 ferrous iron transport protein B YP_004111091.1 5167985 R 652103 CDS YP_004111092.1 316936110 10067058 complement(5169900..5170190) 1 NC_014834.1 PFAM: FeoA family protein; KEGG: bra:BRADO5587 putative FeoA family protein; FeoA family protein 5170190 10067058 Rpdx1_4814 Rhodopseudomonas palustris DX-1 FeoA family protein YP_004111092.1 5169900 R 652103 CDS YP_004111093.1 316936111 10067059 5170574..5170735 1 NC_014834.1 hypothetical protein 5170735 10067059 Rpdx1_4815 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111093.1 5170574 D 652103 CDS YP_004111094.1 316936112 10067060 complement(5170839..5172530) 1 NC_014834.1 KEGG: bbt:BBta_2902 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 5172530 10067060 Rpdx1_4816 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004111094.1 5170839 R 652103 CDS YP_004111095.1 316936113 10067062 complement(5174762..5175163) 1 NC_014834.1 KEGG: ami:Amir_3294 acyl transferase; acyl transferase 5175163 10067062 Rpdx1_4818 Rhodopseudomonas palustris DX-1 acyl transferase YP_004111095.1 5174762 R 652103 CDS YP_004111096.1 316936114 10067063 complement(5175457..5176842) 1 NC_014834.1 KEGG: rsq:Rsph17025_4020 ribulose bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; Ribulose bisphosphate carboxylase, large subunit-like; ribulose-bisphosphate carboxylase 5176842 10067063 Rpdx1_4819 Rhodopseudomonas palustris DX-1 ribulose-bisphosphate carboxylase YP_004111096.1 5175457 R 652103 CDS YP_004111097.1 316936115 10067064 complement(5176901..5177986) 1 NC_014834.1 TIGRFAM: fructose-bisphosphate aldolase, class II, Calvin cycle subtype; ketose-bisphosphate aldolase; KEGG: nha:Nham_4048 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase 5177986 10067064 Rpdx1_4820 Rhodopseudomonas palustris DX-1 fructose-bisphosphate aldolase YP_004111097.1 5176901 R 652103 CDS YP_004111098.1 316936116 10067065 complement(5178046..5180061) 1 NC_014834.1 KEGG: bbt:BBta_6399 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; transketolase 5180061 10067065 Rpdx1_4821 Rhodopseudomonas palustris DX-1 transketolase YP_004111098.1 5178046 R 652103 CDS YP_004111099.1 316936117 10067066 complement(5180096..5180971) 1 NC_014834.1 KEGG: bbt:BBta_6400 phosphoribulokinase; phosphoribulokinase 5180971 10067066 Rpdx1_4822 Rhodopseudomonas palustris DX-1 phosphoribulokinase YP_004111099.1 5180096 R 652103 CDS YP_004111100.1 316936118 10067067 complement(5181009..5182040) 1 NC_014834.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: nha:Nham_3754 fructose-1,6-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase 5182040 10067067 Rpdx1_4823 Rhodopseudomonas palustris DX-1 inositol phosphatase/fructose-16-bisphosphatase YP_004111100.1 5181009 R 652103 CDS YP_004111101.1 316936119 10067068 5182512..5183261 1 NC_014834.1 KEGG: sth:STH2045 esterase; PFAM: alpha/beta hydrolase fold; acylglycerol lipase 5183261 10067068 Rpdx1_4824 Rhodopseudomonas palustris DX-1 acylglycerol lipase YP_004111101.1 5182512 D 652103 CDS YP_004111102.1 316936120 10067070 complement(5184337..5186100) 1 NC_014834.1 KEGG: bja:blr3703 flagellar hook-associated protein; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK 5186100 10067070 Rpdx1_4826 Rhodopseudomonas palustris DX-1 flagellar hook-associated protein FlgK YP_004111102.1 5184337 R 652103 CDS YP_004111103.1 316936121 10067071 complement(5186122..5186577) 1 NC_014834.1 KEGG: bbt:BBta_3167 hypothetical protein; hypothetical protein 5186577 10067071 Rpdx1_4827 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111103.1 5186122 R 652103 CDS YP_004111104.1 316936122 10067072 complement(5186574..5186858) 1 NC_014834.1 KEGG: swi:Swit_3816 translation initiation factor IF-2; translation initiation factor IF-2 5186858 10067072 Rpdx1_4828 Rhodopseudomonas palustris DX-1 translation initiation factor IF-2 YP_004111104.1 5186574 R 652103 CDS YP_004111105.1 316936123 10067073 complement(5186862..5188130) 1 NC_014834.1 KEGG: bja:blr3700 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar hook-basal body protein 5188130 10067073 Rpdx1_4829 Rhodopseudomonas palustris DX-1 flagellar hook-basal body protein YP_004111105.1 5186862 R 652103 CDS YP_004111106.1 316936124 10067074 complement(5188149..5188817) 1 NC_014834.1 PFAM: flagellar hook capping protein; KEGG: bbt:BBta_3164 putative basal-body rod modification protein FlgD; flagellar hook capping protein 5188817 10067074 Rpdx1_4830 Rhodopseudomonas palustris DX-1 flagellar hook capping protein YP_004111106.1 5188149 R 652103 CDS YP_004111107.1 316936125 10067075 complement(5189064..5189354) 1 NC_014834.1 KEGG: bja:blr3698 hypothetical protein; hypothetical protein 5189354 10067075 Rpdx1_4831 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111107.1 5189064 R 652103 CDS YP_004111108.1 316936126 10067076 complement(5189480..5189884) 1 NC_014834.1 KEGG: bbt:BBta_3161 putative flagellar protein FliS; putative flagellar protein FliS 5189884 10067076 Rpdx1_4832 Rhodopseudomonas palustris DX-1 putative flagellar protein FliS YP_004111108.1 5189480 R 652103 CDS YP_004111109.1 316936127 10067077 complement(5189887..5191581) 1 NC_014834.1 PFAM: flagellar hook-associated 2 domain protein; flagellar hook-associated protein 2 domain protein; flagellin hook IN repeat protein; KEGG: bbt:BBta_3160 putative flagellar hook-associated protein 2 (HAP2, FliD protein); flagellar hook-associated 2 domain-containing protein 5191581 10067077 Rpdx1_4833 Rhodopseudomonas palustris DX-1 flagellar hook-associated 2 domain-containing protein YP_004111109.1 5189887 R 652103 CDS YP_004111110.1 316936128 10067078 complement(5191649..5192464) 1 NC_014834.1 PFAM: flagellin domain protein; KEGG: bbt:BBta_3159 putative flagellin; flagellin domain-containing protein 5192464 10067078 Rpdx1_4834 Rhodopseudomonas palustris DX-1 flagellin domain-containing protein YP_004111110.1 5191649 R 652103 CDS YP_004111111.1 316936129 10067079 complement(5192606..5193262) 1 NC_014834.1 KEGG: bra:BRADO4891 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 5193262 10067079 Rpdx1_4835 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004111111.1 5192606 R 652103 CDS YP_004111112.1 316936130 10067080 5193854..5195236 1 NC_014834.1 KEGG: bbt:BBta_3157 hypothetical protein; hypothetical protein 5195236 10067080 Rpdx1_4836 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111112.1 5193854 D 652103 CDS YP_004111113.1 316936131 10067082 complement(5195678..5197171) 1 NC_014834.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: nha:Nham_3615 alpha,alpha-trehalose-phosphate synthase; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase 5197171 10067082 Rpdx1_4837 Rhodopseudomonas palustris DX-1 alpha,alpha-trehalose-phosphate synthase YP_004111113.1 5195678 R 652103 CDS YP_004111114.1 316936132 10067083 complement(5197314..5198114) 1 NC_014834.1 KEGG: bja:bll0323 trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; trehalose-phosphatase 5198114 10067083 Rpdx1_4838 Rhodopseudomonas palustris DX-1 trehalose-phosphatase YP_004111114.1 5197314 R 652103 CDS YP_004111115.1 316936133 10067084 complement(5198111..5199610) 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll0324 putative sugar transport protein; major facilitator superfamily protein 5199610 10067084 Rpdx1_4839 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004111115.1 5198111 R 652103 CDS YP_004111116.1 316936134 10067085 complement(5199798..5201843) 1 NC_014834.1 KEGG: bja:bll0327 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 5201843 10067085 Rpdx1_4840 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004111116.1 5199798 R 652103 CDS YP_004111117.1 316936135 10067087 5202508..5202993 1 NC_014834.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bra:BRADO6957 putative carbon-monoxide dehydrogenase small subunit, CoxS-like protein; (2Fe-2S)-binding domain-containing protein 5202993 10067087 Rpdx1_4842 Rhodopseudomonas palustris DX-1 (2Fe-2S)-binding domain-containing protein YP_004111117.1 5202508 D 652103 CDS YP_004111118.1 316936136 10067088 5203119..5205473 1 NC_014834.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bra:BRADO6958 putative carbon-monoxide dehydrogenase large subunit, CoxL-like protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 5205473 10067088 Rpdx1_4843 Rhodopseudomonas palustris DX-1 aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit YP_004111118.1 5203119 D 652103 CDS YP_004111119.1 316936137 10067089 5205641..5206441 1 NC_014834.1 KEGG: bbt:BBta_0572 putative carbon monoxide dehydrogenase medium subunit, CoxM-like protein; PFAM: molybdopterin dehydrogenase FAD-binding; carbon-monoxide dehydrogenase 5206441 10067089 Rpdx1_4844 Rhodopseudomonas palustris DX-1 carbon-monoxide dehydrogenase YP_004111119.1 5205641 D 652103 CDS YP_004111120.1 316936138 10067090 5206627..5207742 1 NC_014834.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bja:blr0338 alpha-methylacyl-CoA racemase; L-carnitine dehydratase/bile acid-inducible protein F 5207742 10067090 Rpdx1_4845 Rhodopseudomonas palustris DX-1 L-carnitine dehydratase/bile acid-inducible protein F YP_004111120.1 5206627 D 652103 CDS YP_004111121.1 316936139 10067091 complement(5207866..5209134) 1 NC_014834.1 TIGRFAM: fumarylacetoacetase; KEGG: bbt:BBta_0567 fumarylacetoacetate hydrolase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetase 5209134 10067091 Rpdx1_4846 Rhodopseudomonas palustris DX-1 fumarylacetoacetase YP_004111121.1 5207866 R 652103 CDS YP_004111122.1 316936140 10067093 complement(5209338..5209994) 1 NC_014834.1 KEGG: nha:Nham_0920 maleylacetoacetate isomerase; TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; maleylacetoacetate isomerase 5209994 10067093 Rpdx1_4848 Rhodopseudomonas palustris DX-1 maleylacetoacetate isomerase YP_004111122.1 5209338 R 652103 CDS YP_004111123.1 316936141 10067094 complement(5209991..5211337) 1 NC_014834.1 TIGRFAM: homogentisate 1,2-dioxygenase; KEGG: bja:bll0343 homogentisate 1,2-dioxygenase; PFAM: homogentisate 12-dioxygenase; homogentisate 1,2-dioxygenase 5211337 10067094 Rpdx1_4849 Rhodopseudomonas palustris DX-1 homogentisate 1,2-dioxygenase YP_004111123.1 5209991 R 652103 CDS YP_004111124.1 316936142 10067095 complement(5211395..5212348) 1 NC_014834.1 KEGG: bbt:BBta_0565 putative metallo-beta-lactamase family protein; putative metallo-beta-lactamase family protein 5212348 10067095 Rpdx1_4850 Rhodopseudomonas palustris DX-1 putative metallo-beta-lactamase family protein YP_004111124.1 5211395 R 652103 CDS YP_004111125.1 316936143 10067096 complement(5212543..5212758) 1 NC_014834.1 KEGG: nha:Nham_0923 hypothetical protein; hypothetical protein 5212758 10067096 Rpdx1_4851 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111125.1 5212543 R 652103 CDS YP_004111126.1 316936144 10067097 complement(5212755..5214371) 1 NC_014834.1 PFAM: monooxygenase FAD-binding; KEGG: nha:Nham_0924 FAD-dependent oxidoreductase; FAD-binding monooxygenase protein 5214371 10067097 Rpdx1_4852 Rhodopseudomonas palustris DX-1 FAD-binding monooxygenase protein YP_004111126.1 5212755 R 652103 CDS YP_004111127.1 316936145 10067098 5214498..5214995 1 NC_014834.1 KEGG: bra:BRADO6970 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR 5214995 10067098 Rpdx1_4853 Rhodopseudomonas palustris DX-1 regulatory protein MarR YP_004111127.1 5214498 D 652103 CDS YP_004111128.1 316936146 10067099 5215165..5216589 1 NC_014834.1 KEGG: nwi:Nwi_3029 peptidase C14; PFAM: peptidase C14 caspase catalytic subunit p20; TPR repeat-containing protein; SMART: Tetratricopeptide repeat; peptidase C14 caspase catalytic subunit p20 5216589 10067099 Rpdx1_4854 Rhodopseudomonas palustris DX-1 peptidase C14 caspase catalytic subunit p20 YP_004111128.1 5215165 D 652103 CDS YP_004111129.1 316936147 10067100 5216710..5217360 1 NC_014834.1 PFAM: OmpA/MotB domain protein; KEGG: bbt:BBta_0555 hypothetical protein; OmpA/MotB domain-containing protein 5217360 10067100 Rpdx1_4855 Rhodopseudomonas palustris DX-1 OmpA/MotB domain-containing protein YP_004111129.1 5216710 D 652103 CDS YP_004111130.1 316936148 10067101 5217520..5218407 1 NC_014834.1 KEGG: nha:Nham_3611 secretion protein HlyD; secretion protein HlyD 5218407 10067101 Rpdx1_4856 Rhodopseudomonas palustris DX-1 secretion protein HlyD YP_004111130.1 5217520 D 652103 CDS YP_004111131.1 316936149 10067102 5218407..5221550 1 NC_014834.1 PFAM: acriflavin resistance protein; KEGG: nha:Nham_3610 acriflavin resistance protein; acriflavin resistance protein 5221550 10067102 Rpdx1_4857 Rhodopseudomonas palustris DX-1 acriflavin resistance protein YP_004111131.1 5218407 D 652103 CDS YP_004111132.1 316936150 10067103 5221601..5223421 1 NC_014834.1 PFAM: AsmA family protein; KEGG: nha:Nham_3609 AsmA; AsmA family protein 5223421 10067103 Rpdx1_4858 Rhodopseudomonas palustris DX-1 AsmA family protein YP_004111132.1 5221601 D 652103 CDS YP_004111133.1 316936151 10067104 5223528..5224427 1 NC_014834.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bbt:BBta_0549 hypothetical protein; RND family efflux transporter MFP subunit 5224427 10067104 Rpdx1_4859 Rhodopseudomonas palustris DX-1 RND family efflux transporter MFP subunit YP_004111133.1 5223528 D 652103 CDS YP_004111134.1 316936152 10067105 complement(5224465..5224746) 1 NC_014834.1 KEGG: ppu:PP_1576 immunity protein, putative; hypothetical protein 5224746 10067105 Rpdx1_4860 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111134.1 5224465 R 652103 CDS YP_004111135.1 316936153 10067106 complement(5225057..5226694) 1 NC_014834.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: nwi:Nwi_0151 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic; lysyl-tRNA synthetase 5226694 10067106 Rpdx1_4861 Rhodopseudomonas palustris DX-1 lysyl-tRNA synthetase YP_004111135.1 5225057 R 652103 CDS YP_004111136.1 316936154 10067107 complement(5226728..5227687) 1 NC_014834.1 KEGG: nha:Nham_0202 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein 5227687 10067107 Rpdx1_4862 Rhodopseudomonas palustris DX-1 family 3 extracellular solute-binding protein YP_004111136.1 5226728 R 652103 CDS YP_004111137.1 316936155 10067108 5227728..5229848 1 NC_014834.1 PFAM: glycosyl transferase family 2; KEGG: oca:OCAR_4666 glycosyl transferase, family 2; glycosyl transferase family 2 protein 5229848 10067108 Rpdx1_4863 Rhodopseudomonas palustris DX-1 glycosyl transferase family 2 protein YP_004111137.1 5227728 D 652103 CDS YP_004111138.1 316936156 10067109 complement(5229799..5230398) 1 NC_014834.1 PFAM: electron transport protein SCO1/SenC; KEGG: bbt:BBta_0787 putative electron transport protein; electron transport protein SCO1/SenC 5230398 10067109 Rpdx1_4864 Rhodopseudomonas palustris DX-1 electron transport protein SCO1/SenC YP_004111138.1 5229799 R 652103 CDS YP_004111139.1 316936157 10067110 complement(5230605..5231063) 1 NC_014834.1 KEGG: bja:blr1130 hypothetical protein; hypothetical protein 5231063 10067110 Rpdx1_4865 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111139.1 5230605 R 652103 CDS YP_004111140.1 316936158 10067111 5231803..5233773 1 NC_014834.1 KEGG: bbt:BBta_1388 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 5233773 10067111 Rpdx1_4866 Rhodopseudomonas palustris DX-1 methyl-accepting chemotaxis sensory transducer YP_004111140.1 5231803 D 652103 CDS YP_004111141.1 316936159 10067112 5233924..5234301 1 NC_014834.1 KEGG: bja:bll4535 hypothetical protein; hypothetical protein 5234301 10067112 Rpdx1_4867 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111141.1 5233924 D 652103 CDS YP_004111142.1 316936160 10067113 complement(5234419..5235582) 1 NC_014834.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bpa:BPP0371 NADH:flavin oxidoreductase / NADH oxidase family protein; NADH:flavin oxidoreductase 5235582 10067113 Rpdx1_4868 Rhodopseudomonas palustris DX-1 NADH:flavin oxidoreductase YP_004111142.1 5234419 R 652103 CDS YP_004111143.1 316936161 10067114 5235746..5236744 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: azc:AZC_3350 hypothetical protein; hypothetical protein 5236744 10067114 Rpdx1_4869 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111143.1 5235746 D 652103 CDS YP_004111144.1 316936162 10067115 5236767..5237669 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bra:BRADO2335 protochatechuate degradation transcriptional regulator; LysR family transcriptional regulator 5237669 10067115 Rpdx1_4870 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004111144.1 5236767 D 652103 CDS YP_004111145.1 316936163 10067116 5237796..5238914 1 NC_014834.1 PFAM: protein of unknown function DUF453; KEGG: azo:azo2544 hypothetical protein; hypothetical protein 5238914 10067116 Rpdx1_4871 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111145.1 5237796 D 652103 CDS YP_004111146.1 316936164 10067117 5239080..5240108 1 NC_014834.1 PFAM: amidohydrolase 2; KEGG: bra:BRADO2337 4-oxalomesaconate hydratase; amidohydrolase 2 5240108 10067117 Rpdx1_4872 Rhodopseudomonas palustris DX-1 amidohydrolase 2 YP_004111146.1 5239080 D 652103 CDS YP_004111147.1 316936165 10067118 5240111..5240806 1 NC_014834.1 KEGG: mag:amb0252 hypothetical protein; TIGRFAM: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; PFAM: Dimethylmenaquinone methyltransferase; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 5240806 10067118 Rpdx1_4873 Rhodopseudomonas palustris DX-1 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase YP_004111147.1 5240111 D 652103 CDS YP_004111148.1 316936166 10067119 5240806..5241735 1 NC_014834.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bra:BRADO2339 dehydrogenase; phosphogluconate dehydrogenase, NAD-binding, putative-like protein 5241735 10067119 Rpdx1_4874 Rhodopseudomonas palustris DX-1 phosphogluconate dehydrogenase, NAD-binding, putative-like protein YP_004111148.1 5240806 D 652103 CDS YP_004111149.1 316936167 10067120 5242000..5242914 1 NC_014834.1 PFAM: amidohydrolase 2; KEGG: bra:BRADO2340 2-pyrone-4,6-dicarboxylic acid hydrolase; amidohydrolase 2 5242914 10067120 Rpdx1_4875 Rhodopseudomonas palustris DX-1 amidohydrolase 2 YP_004111149.1 5242000 D 652103 CDS YP_004111150.1 316936168 10067121 5243040..5243429 1 NC_014834.1 TIGRFAM: protocatechuate 4,5-dioxygenase, alpha subunit; KEGG: bbt:BBta_2701 protocatechuate 4,5-dioxygenase subunit alpha; PFAM: Extradiol ring-cleavage dioxygenase LigAB LigA subunit; protocatechuate 4,5-dioxygenase subunit alpha 5243429 10067121 Rpdx1_4876 Rhodopseudomonas palustris DX-1 protocatechuate 4,5-dioxygenase subunit alpha YP_004111150.1 5243040 D 652103 CDS YP_004111151.1 316936169 10067122 5243429..5244283 1 NC_014834.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: bra:BRADO2342 protocatechuate 4,5-dioxygenase subunit beta; extradiol ring-cleavage dioxygenase class III protein subunit B 5244283 10067122 Rpdx1_4877 Rhodopseudomonas palustris DX-1 extradiol ring-cleavage dioxygenase class III protein subunit B YP_004111151.1 5243429 D 652103 CDS YP_004111152.1 316936170 10067123 5244285..5245244 1 NC_014834.1 PFAM: oxidoreductase domain protein; KEGG: bra:BRADO2343 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; oxidoreductase domain-containing protein 5245244 10067123 Rpdx1_4878 Rhodopseudomonas palustris DX-1 oxidoreductase domain-containing protein YP_004111152.1 5244285 D 652103 CDS YP_004111153.1 316936171 10067124 5245435..5245851 1 NC_014834.1 KEGG: nha:Nham_3738 hypothetical protein; hypothetical protein 5245851 10067124 Rpdx1_4879 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111153.1 5245435 D 652103 CDS YP_004111154.1 316936172 10067125 5245956..5246348 1 NC_014834.1 KEGG: bja:blr1323 phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-ATP diphosphatase 5246348 10067125 Rpdx1_4880 Rhodopseudomonas palustris DX-1 phosphoribosyl-ATP diphosphatase YP_004111154.1 5245956 D 652103 CDS YP_004111155.1 316936173 10067126 5246418..5246999 1 NC_014834.1 KEGG: oca:OCAR_7372 DedA family; DedA family 5246999 10067126 Rpdx1_4881 Rhodopseudomonas palustris DX-1 DedA family YP_004111155.1 5246418 D 652103 CDS YP_004111156.1 316936174 10067127 5247055..5247702 1 NC_014834.1 KEGG: bra:BRADO6577 putative signal peptide; hypothetical protein 5247702 10067127 Rpdx1_4882 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111156.1 5247055 D 652103 CDS YP_004111157.1 316936175 10067128 5247847..5248815 1 NC_014834.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bbt:BBta_0960 putative dioxygenase; 2-nitropropane dioxygenase 5248815 10067128 Rpdx1_4883 Rhodopseudomonas palustris DX-1 2-nitropropane dioxygenase YP_004111157.1 5247847 D 652103 CDS YP_004111158.1 316936176 10067129 5248971..5249744 1 NC_014834.1 KEGG: bja:blr1328 hypothetical protein; hypothetical protein 5249744 10067129 Rpdx1_4884 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111158.1 5248971 D 652103 CDS YP_004111159.1 316936177 10067130 5249934..5250188 1 NC_014834.1 KEGG: bbt:BBta_0975 hypothetical protein; hypothetical protein 5250188 10067130 Rpdx1_4885 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111159.1 5249934 D 652103 CDS YP_004111160.1 316936178 10067131 5250325..5251062 1 NC_014834.1 KEGG: bra:BRADO6560 putative signal peptide; hypothetical protein 5251062 10067131 Rpdx1_4886 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111160.1 5250325 D 652103 CDS YP_004111161.1 316936179 10067132 complement(5251120..5252865) 1 NC_014834.1 PFAM: TPR repeat-containing protein; KEGG: nar:Saro_3797 SARP family transcriptional regulator; hypothetical protein 5252865 10067132 Rpdx1_4887 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111161.1 5251120 R 652103 CDS YP_004111162.1 316936180 10067133 5253079..5254080 1 NC_014834.1 KEGG: mar:MAE_00590 putative peptidase PatA-like protein; putative peptidase PatA-like protein 5254080 10067133 Rpdx1_4888 Rhodopseudomonas palustris DX-1 putative peptidase PatA-like protein YP_004111162.1 5253079 D 652103 CDS YP_004111163.1 316936181 10067134 complement(5254053..5254619) 1 NC_014834.1 PFAM: Protein of unknown function DUF2478; KEGG: mch:Mchl_5508 hypothetical protein; hypothetical protein 5254619 10067134 Rpdx1_4889 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111163.1 5254053 R 652103 CDS YP_004111164.1 316936182 10067135 complement(5254766..5255887) 1 NC_014834.1 TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; KEGG: bja:blr6953 molybdenum ABC transporter ATP-binding protein; SMART: AAA ATPase; molybdate ABC transporter ATPase 5255887 10067135 Rpdx1_4890 Rhodopseudomonas palustris DX-1 molybdate ABC transporter ATPase YP_004111164.1 5254766 R 652103 CDS YP_004111165.1 316936183 10067136 complement(5255884..5256570) 1 NC_014834.1 KEGG: bbt:BBta_2079 molybdenum ABC transporter permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit 5256570 10067136 Rpdx1_4891 Rhodopseudomonas palustris DX-1 molybdate ABC transporter inner membrane subunit YP_004111165.1 5255884 R 652103 CDS YP_004111166.1 316936184 10067137 complement(5256684..5257457) 1 NC_014834.1 KEGG: bja:blr6951 molybdenum ABC transporter molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein 5257457 10067137 Rpdx1_4892 Rhodopseudomonas palustris DX-1 molybdenum ABC transporter periplasmic molybdate-binding protein YP_004111166.1 5256684 R 652103 CDS YP_004111167.1 316936185 10067138 complement(5257576..5258367) 1 NC_014834.1 KEGG: nha:Nham_2953 ModE family transcriptional regulator; TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; putative ModE family transcriptional regulator 5258367 10067138 Rpdx1_4893 Rhodopseudomonas palustris DX-1 putative ModE family transcriptional regulator YP_004111167.1 5257576 R 652103 CDS YP_004111168.1 316936186 10067139 5258467..5258676 1 NC_014834.1 PFAM: TOBE domain protein; KEGG: mlo:msr1466 molybdo-pterin binding protein; TOBE domain-containing protein 5258676 10067139 Rpdx1_4894 Rhodopseudomonas palustris DX-1 TOBE domain-containing protein YP_004111168.1 5258467 D 652103 CDS YP_004111169.1 316936187 10067140 complement(5258721..5259290) 1 NC_014834.1 PFAM: Protein of unknown function DUF2478; KEGG: nha:Nham_3410 hypothetical protein; hypothetical protein 5259290 10067140 Rpdx1_4895 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111169.1 5258721 R 652103 CDS YP_004111170.1 316936188 10067141 5259772..5264760 1 NC_014834.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: rfr:Rfer_3209 pyruvate flavodoxin/ferredoxin oxidoreductase-like; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 5264760 10067141 Rpdx1_4896 Rhodopseudomonas palustris DX-1 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_004111170.1 5259772 D 652103 CDS YP_004111171.1 316936189 10067142 5264757..5267591 1 NC_014834.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: rfr:Rfer_3208 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5267591 10067142 Rpdx1_4897 Rhodopseudomonas palustris DX-1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004111171.1 5264757 D 652103 CDS YP_004111172.1 316936190 10067143 complement(5267780..5268115) 1 NC_014834.1 KEGG: azc:AZC_3513 hypothetical protein; hypothetical protein 5268115 10067143 Rpdx1_4898 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111172.1 5267780 R 652103 CDS YP_004111173.1 316936191 10067144 5268584..5271667 1 NC_014834.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: bja:blr8131 DNA polymerase I; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA polymerase I 5271667 10067144 Rpdx1_4899 Rhodopseudomonas palustris DX-1 DNA polymerase I YP_004111173.1 5268584 D 652103 CDS YP_004111174.1 316936192 10067145 5271757..5272320 1 NC_014834.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: nha:Nham_0451 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 5272320 10067145 Rpdx1_4900 Rhodopseudomonas palustris DX-1 orotate phosphoribosyltransferase YP_004111174.1 5271757 D 652103 CDS YP_004111175.1 316936193 10067146 5272478..5273221 1 NC_014834.1 KEGG: bja:blr8135 hypothetical protein; hypothetical protein 5273221 10067146 Rpdx1_4901 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111175.1 5272478 D 652103 CDS YP_004111176.1 316936194 10067147 complement(5273456..5273887) 1 NC_014834.1 KEGG: bja:bll8136 hypothetical protein; hypothetical protein 5273887 10067147 Rpdx1_4902 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111176.1 5273456 R 652103 CDS YP_004111177.1 316936195 10067148 5274206..5276719 1 NC_014834.1 KEGG: bbt:BBta_7363 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 5276719 10067148 Rpdx1_4903 Rhodopseudomonas palustris DX-1 glycogen/starch/alpha-glucan phosphorylase YP_004111177.1 5274206 D 652103 CDS YP_004111178.1 316936196 10067149 5276997..5277830 1 NC_014834.1 KEGG: bja:blr8140 hypothetical protein; hypothetical protein 5277830 10067149 Rpdx1_4904 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111178.1 5276997 D 652103 CDS YP_004111179.1 316936197 10067150 5277880..5278869 1 NC_014834.1 KEGG: nwi:Nwi_0352 arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; arginase 5278869 10067150 Rpdx1_4905 Rhodopseudomonas palustris DX-1 arginase YP_004111179.1 5277880 D 652103 CDS YP_004111180.1 316936198 10067151 5279120..5280739 1 NC_014834.1 KEGG: bra:BRADO3397 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5280739 10067151 Rpdx1_4906 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004111180.1 5279120 D 652103 CDS YP_004111181.1 316936199 10067152 complement(5280895..5282088) 1 NC_014834.1 KEGG: nha:Nham_0672 hypothetical protein; hypothetical protein 5282088 10067152 Rpdx1_4907 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111181.1 5280895 R 652103 CDS YP_004111182.1 316936200 10067153 5282249..5282827 1 NC_014834.1 PFAM: ChaC family protein; KEGG: bbt:BBta_1180 putative cation transport protein ChaC-related; ChaC family protein 5282827 10067153 Rpdx1_4908 Rhodopseudomonas palustris DX-1 ChaC family protein YP_004111182.1 5282249 D 652103 CDS YP_004111183.1 316936201 10067154 complement(5282846..5283655) 1 NC_014834.1 KEGG: bja:blr1393 1-acylglycerol-3-phosphate O-acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 5283655 10067154 Rpdx1_4909 Rhodopseudomonas palustris DX-1 phospholipid/glycerol acyltransferase YP_004111183.1 5282846 R 652103 CDS YP_004111184.1 316936202 10067155 complement(5283669..5284394) 1 NC_014834.1 PFAM: protein of unknown function DUF218; KEGG: nha:Nham_0669 hypothetical protein; hypothetical protein 5284394 10067155 Rpdx1_4910 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111184.1 5283669 R 652103 CDS YP_004111185.1 316936203 10067156 complement(5284549..5285535) 1 NC_014834.1 PFAM: protein of unknown function DUF214; KEGG: bja:blr1391 cell division protein; hypothetical protein 5285535 10067156 Rpdx1_4911 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111185.1 5284549 R 652103 CDS YP_004111186.1 316936204 10067157 complement(5285528..5286187) 1 NC_014834.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: bra:BRADO6470 cell division ABC transpoter ATP-binding protein; SMART: AAA ATPase; cell division ATP-binding protein FtsE 5286187 10067157 Rpdx1_4912 Rhodopseudomonas palustris DX-1 cell division ATP-binding protein FtsE YP_004111186.1 5285528 R 652103 CDS YP_004111187.1 316936205 10067158 5286331..5287221 1 NC_014834.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: nha:Nham_0666 zinc finger/thioredoxin putative; hypothetical protein 5287221 10067158 Rpdx1_4913 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111187.1 5286331 D 652103 CDS YP_004111188.1 316936206 10067159 5287282..5287662 1 NC_014834.1 KEGG: bja:bll1388 two-component response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 5287662 10067159 Rpdx1_4914 Rhodopseudomonas palustris DX-1 response regulator receiver protein YP_004111188.1 5287282 D 652103 CDS YP_004111189.1 316936207 10067160 complement(5287866..5290409) 1 NC_014834.1 KEGG: nha:Nham_0664 hypothetical protein; hypothetical protein 5290409 10067160 Rpdx1_4915 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111189.1 5287866 R 652103 CDS YP_004111190.1 316936208 10067161 5290569..5290949 1 NC_014834.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bja:bll1385 putative gamma carboxymuconolactone decarboxylase protein; carboxymuconolactone decarboxylase 5290949 10067161 Rpdx1_4916 Rhodopseudomonas palustris DX-1 carboxymuconolactone decarboxylase YP_004111190.1 5290569 D 652103 CDS YP_004111191.1 316936209 10067162 complement(5291195..5292460) 1 NC_014834.1 KEGG: bja:blr1383 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 5292460 10067162 Rpdx1_4917 Rhodopseudomonas palustris DX-1 diaminopimelate decarboxylase YP_004111191.1 5291195 R 652103 CDS YP_004111192.1 316936210 10067163 complement(5292469..5292750) 1 NC_014834.1 KEGG: nwi:Nwi_0714 hypothetical protein; hypothetical protein 5292750 10067163 Rpdx1_4918 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111192.1 5292469 R 652103 CDS YP_004111193.1 316936211 10067164 complement(5292807..5294204) 1 NC_014834.1 KEGG: bja:blr1381 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase 5294204 10067164 Rpdx1_4919 Rhodopseudomonas palustris DX-1 argininosuccinate lyase YP_004111193.1 5292807 R 652103 CDS YP_004111194.1 316936212 10067165 5294300..5294968 1 NC_014834.1 PFAM: Redoxin domain protein; KEGG: bra:BRADO6488 thiol:disulfide interchange protein TlpA (cytochrome c biogenesis protein TlpA); redoxin domain-containing protein 5294968 10067165 Rpdx1_4920 Rhodopseudomonas palustris DX-1 redoxin domain-containing protein YP_004111194.1 5294300 D 652103 CDS YP_004111195.1 316936213 10067166 5295074..5295424 1 NC_014834.1 PFAM: protein of unknown function DUF1428; KEGG: oca:OCAR_4758 RNA signal recognition particle 4.5S RNA; hypothetical protein 5295424 10067166 Rpdx1_4921 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111195.1 5295074 D 652103 CDS YP_004111196.1 316936214 10067167 complement(5295439..5295627) 1 NC_014834.1 KEGG: bbt:BBta_1143 hypothetical protein; hypothetical protein 5295627 10067167 Rpdx1_4922 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111196.1 5295439 R 652103 CDS YP_004111197.1 316936215 10067168 complement(5295756..5296556) 1 NC_014834.1 KEGG: ara:Arad_0487 NAD(P)H dehydrogenase (quinone) protein; PFAM: NAD(P)H dehydrogenase (quinone); ribosyldihydronicotinamide dehydrogenase 5296556 10067168 Rpdx1_4923 Rhodopseudomonas palustris DX-1 ribosyldihydronicotinamide dehydrogenase YP_004111197.1 5295756 R 652103 CDS YP_004111198.1 316936216 10067169 5296649..5297563 1 NC_014834.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mlo:mlr7815 transcriptional regulator; LysR family transcriptional regulator 5297563 10067169 Rpdx1_4924 Rhodopseudomonas palustris DX-1 LysR family transcriptional regulator YP_004111198.1 5296649 D 652103 CDS YP_004111199.1 316936217 10067170 complement(5297583..5298464) 1 NC_014834.1 KEGG: nha:Nham_3479 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxybutyryl-CoA dehydrogenase 5298464 10067170 Rpdx1_4925 Rhodopseudomonas palustris DX-1 3-hydroxybutyryl-CoA dehydrogenase YP_004111199.1 5297583 R 652103 CDS YP_004111200.1 316936218 10067171 complement(5298628..5299575) 1 NC_014834.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: bja:blr1378 electron transfer flavoprotein large subunit; electron transfer flavoprotein subunit alpha 5299575 10067171 Rpdx1_4926 Rhodopseudomonas palustris DX-1 electron transfer flavoprotein subunit alpha YP_004111200.1 5298628 R 652103 CDS YP_004111201.1 316936219 10067172 complement(5299575..5300324) 1 NC_014834.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: bja:blr1377 electron transfer flavoprotein beta subunit; electron transfer flavoprotein subunit alpha/beta 5300324 10067172 Rpdx1_4927 Rhodopseudomonas palustris DX-1 electron transfer flavoprotein subunit alpha/beta YP_004111201.1 5299575 R 652103 CDS YP_004111202.1 316936220 10067173 complement(5300531..5301103) 1 NC_014834.1 TIGRFAM: ATP/cobalamin adenosyltransferase; KEGG: bra:BRADO6493 putative ATP:cob(I)alamin adenosyltransferase, monofunctional PduO type; PFAM: cobalamin adenosyltransferase; ATP/cobalamin adenosyltransferase 5301103 10067173 Rpdx1_4928 Rhodopseudomonas palustris DX-1 ATP/cobalamin adenosyltransferase YP_004111202.1 5300531 R 652103 CDS YP_004111203.1 316936221 10067174 complement(5301156..5301350) 1 NC_014834.1 KEGG: bja:blr1375 hypothetical protein; hypothetical protein 5301350 10067174 Rpdx1_4929 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111203.1 5301156 R 652103 CDS YP_004111204.1 316936222 10067175 5301489..5302382 1 NC_014834.1 KEGG: nwi:Nwi_0750 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; ribonuclease BN 5302382 10067175 Rpdx1_4930 Rhodopseudomonas palustris DX-1 ribonuclease BN YP_004111204.1 5301489 D 652103 CDS YP_004111205.1 316936223 10067176 complement(5302309..5303553) 1 NC_014834.1 KEGG: bja:blr1373 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; histidine kinase 5303553 10067176 Rpdx1_4931 Rhodopseudomonas palustris DX-1 histidine kinase YP_004111205.1 5302309 R 652103 CDS YP_004111206.1 316936224 10067177 complement(5303628..5304509) 1 NC_014834.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: bja:blr1372 glutamyl-Q tRNA(Asp) synthetase; glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain 5304509 10067177 Rpdx1_4932 Rhodopseudomonas palustris DX-1 glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004111206.1 5303628 R 652103 CDS YP_004111207.1 316936225 10067178 5304580..5305350 1 NC_014834.1 KEGG: bja:bll1371 DNA-3-methyladenine glycosidase II; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; HhH-GPD family protein 5305350 10067178 Rpdx1_4933 Rhodopseudomonas palustris DX-1 HhH-GPD family protein YP_004111207.1 5304580 D 652103 CDS YP_004111208.1 316936226 10067179 complement(5305434..5305874) 1 NC_014834.1 KEGG: bja:bll0699 nickel responsive regulator; TIGRFAM: nickel-responsive transcriptional regulator NikR; PFAM: NikR nickel binding; CopG family transcriptional regulator 5305874 10067179 Rpdx1_4934 Rhodopseudomonas palustris DX-1 CopG family transcriptional regulator YP_004111208.1 5305434 R 652103 CDS YP_004111209.1 316936227 10067180 5306032..5308227 1 NC_014834.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bra:BRADO5677 putative iron transport outer membrane receptor; TonB-dependent receptor plug 5308227 10067180 Rpdx1_4935 Rhodopseudomonas palustris DX-1 TonB-dependent receptor plug YP_004111209.1 5306032 D 652103 CDS YP_004111210.1 316936228 10067181 5308718..5309071 1 NC_014834.1 PFAM: PRC-barrel domain protein; KEGG: oca:OCAR_6906 PRC-barrel domain protein; PRC-barrel domain-containing protein 5309071 10067181 Rpdx1_4936 Rhodopseudomonas palustris DX-1 PRC-barrel domain-containing protein YP_004111210.1 5308718 D 652103 CDS YP_004111211.1 316936229 10067182 complement(5309097..5310713) 1 NC_014834.1 KEGG: bra:BRADO0511 alpha-glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase 5310713 10067182 Rpdx1_4937 Rhodopseudomonas palustris DX-1 alpha amylase YP_004111211.1 5309097 R 652103 CDS YP_004111212.1 316936230 10067183 5311194..5311721 1 NC_014834.1 KEGG: lth:KLTH0F01518g KLTH0F01518p; hypothetical protein 5311721 10067183 Rpdx1_4938 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111212.1 5311194 D 652103 CDS YP_004111213.1 316936231 10067184 5311828..5313198 1 NC_014834.1 KEGG: rle:RL2002 putative transposase-related protein; manually curated; PFAM: transposase IS4 family protein; transposase IS4 family protein 5313198 10067184 Rpdx1_4939 Rhodopseudomonas palustris DX-1 transposase IS4 family protein YP_004111213.1 5311828 D 652103 CDS YP_004111214.1 316936232 10067185 5313380..5313553 1 NC_014834.1 KEGG: bcv:Bcav_3921 alpha/beta hydrolase fold-3 domain protein; hypothetical protein 5313553 10067185 Rpdx1_4940 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111214.1 5313380 D 652103 CDS YP_004111215.1 316936233 10067186 5313553..5314023 1 NC_014834.1 KEGG: dre:100006405 hypothetical LOC100006405; hypothetical protein 5314023 10067186 Rpdx1_4941 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111215.1 5313553 D 652103 CDS YP_004111216.1 316936234 10067187 complement(5314163..5314315) 1 NC_014834.1 hypothetical protein 5314315 10067187 Rpdx1_4942 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111216.1 5314163 R 652103 CDS YP_004111217.1 316936235 10067189 5314752..5315330 1 NC_014834.1 KEGG: bja:bll1113 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 5315330 10067189 Rpdx1_4943 Rhodopseudomonas palustris DX-1 methylated-DNA--protein-cysteine methyltransferase YP_004111217.1 5314752 D 652103 CDS YP_004111218.1 316936236 10067190 complement(5315327..5316763) 1 NC_014834.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: bra:BRADO6768 putative cation-driven multidrug efflux pump; putative membrane protein; multi antimicrobial extrusion protein MatE 5316763 10067190 Rpdx1_4944 Rhodopseudomonas palustris DX-1 multi antimicrobial extrusion protein MatE YP_004111218.1 5315327 R 652103 CDS YP_004111219.1 316936237 10067191 complement(5316886..5317935) 1 NC_014834.1 KEGG: bja:blr1107 hypothetical protein; hypothetical protein 5317935 10067191 Rpdx1_4945 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111219.1 5316886 R 652103 CDS YP_004111220.1 316936238 10067192 5318084..5319427 1 NC_014834.1 PFAM: NHL repeat containing protein; KEGG: avn:Avin_47060 L-sorbosone dehydrogenase; NHL repeat containing protein 5319427 10067192 Rpdx1_4946 Rhodopseudomonas palustris DX-1 NHL repeat containing protein YP_004111220.1 5318084 D 652103 CDS YP_004111221.1 316936239 10067193 complement(5319464..5320066) 1 NC_014834.1 PFAM: protein of unknown function DUF820; KEGG: bbt:BBta_6783 hypothetical protein; hypothetical protein 5320066 10067193 Rpdx1_4947 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111221.1 5319464 R 652103 CDS YP_004111222.1 316936240 10067194 complement(5320128..5321234) 1 NC_014834.1 KEGG: nha:Nham_0218 2'-deoxycytidine 5'-triphosphate deaminase; 2'-deoxycytidine 5'-triphosphate deaminase 5321234 10067194 Rpdx1_4948 Rhodopseudomonas palustris DX-1 2'-deoxycytidine 5'-triphosphate deaminase YP_004111222.1 5320128 R 652103 CDS YP_004111223.1 316936241 10067195 5321498..5322709 1 NC_014834.1 KEGG: nha:Nham_0219 O-succinylhomoserine sulfhydrylase; TIGRFAM: O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-succinylhomoserine sulfhydrylase 5322709 10067195 Rpdx1_4949 Rhodopseudomonas palustris DX-1 O-succinylhomoserine sulfhydrylase YP_004111223.1 5321498 D 652103 CDS YP_004111224.1 316936242 10067196 complement(5322755..5324092) 1 NC_014834.1 KEGG: mpo:Mpop_0125 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 5324092 10067196 Rpdx1_4950 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004111224.1 5322755 R 652103 CDS YP_004111225.1 316936243 10067197 complement(5324089..5324748) 1 NC_014834.1 KEGG: met:M446_0136 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 5324748 10067197 Rpdx1_4951 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004111225.1 5324089 R 652103 CDS YP_004111226.1 316936244 10067198 5324847..5326679 1 NC_014834.1 KEGG: mpo:Mpop_0123 cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; protein-disulfide reductase 5326679 10067198 Rpdx1_4952 Rhodopseudomonas palustris DX-1 protein-disulfide reductase YP_004111226.1 5324847 D 652103 CDS YP_004111227.1 316936245 10067199 5326704..5327336 1 NC_014834.1 PFAM: DSBA oxidoreductase; KEGG: mea:Mex_1p2579 putative thioredoxin domain protein precursor; DSBA oxidoreductase 5327336 10067199 Rpdx1_4953 Rhodopseudomonas palustris DX-1 DSBA oxidoreductase YP_004111227.1 5326704 D 652103 CDS YP_004111228.1 316936246 10067200 5327357..5328004 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mea:Mex_1p2578 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 5328004 10067200 Rpdx1_4954 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004111228.1 5327357 D 652103 CDS YP_004111229.1 316936247 10067201 complement(5328005..5329036) 1 NC_014834.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bja:blr1104 hypothetical protein; G-D-S-L family lipolytic protein 5329036 10067201 Rpdx1_4955 Rhodopseudomonas palustris DX-1 G-D-S-L family lipolytic protein YP_004111229.1 5328005 R 652103 CDS YP_004111230.1 316936248 10067202 complement(5329036..5329800) 1 NC_014834.1 KEGG: nha:Nham_0221 hypothetical protein; hypothetical protein 5329800 10067202 Rpdx1_4956 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111230.1 5329036 R 652103 CDS YP_004111231.1 316936249 10067203 complement(5329812..5331074) 1 NC_014834.1 PFAM: conserved hypothetical protein; KEGG: bja:blr1102 hypothetical protein; hypothetical protein 5331074 10067203 Rpdx1_4957 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111231.1 5329812 R 652103 CDS YP_004111232.1 316936250 10067204 5331325..5331717 1 NC_014834.1 PFAM: ApaG domain protein; KEGG: bja:bll1101 ApaG; ApaG domain-containing protein 5331717 10067204 Rpdx1_4958 Rhodopseudomonas palustris DX-1 ApaG domain-containing protein YP_004111232.1 5331325 D 652103 CDS YP_004111233.1 316936251 10067205 complement(5331723..5333306) 1 NC_014834.1 KEGG: bja:bll2703 hypothetical protein; hypothetical protein 5333306 10067205 Rpdx1_4959 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111233.1 5331723 R 652103 CDS YP_004111234.1 316936252 10067206 complement(5333465..5334475) 1 NC_014834.1 PFAM: Hsp33 protein; KEGG: bra:BRADO6776 HSP33-like chaperonin; Hsp33 protein 5334475 10067206 Rpdx1_4960 Rhodopseudomonas palustris DX-1 Hsp33 protein YP_004111234.1 5333465 R 652103 CDS YP_004111235.1 316936253 10067207 complement(5334784..5335719) 1 NC_014834.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: nha:Nham_0643 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; ornithine carbamoyltransferase 5335719 10067207 Rpdx1_4961 Rhodopseudomonas palustris DX-1 ornithine carbamoyltransferase YP_004111235.1 5334784 R 652103 CDS YP_004111236.1 316936254 10067208 complement(5335719..5336930) 1 NC_014834.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: nha:Nham_0642 acetylornithine transaminase protein; PFAM: aminotransferase class-III; acetylornithine and succinylornithine aminotransferase 5336930 10067208 Rpdx1_4962 Rhodopseudomonas palustris DX-1 acetylornithine and succinylornithine aminotransferase YP_004111236.1 5335719 R 652103 CDS YP_004111237.1 316936255 10067209 5337408..5337917 1 NC_014834.1 PFAM: GcrA cell cycle regulator; KEGG: nha:Nham_0641 GcrA cell cycle regulator; GcrA cell cycle regulator 5337917 10067209 Rpdx1_4963 Rhodopseudomonas palustris DX-1 GcrA cell cycle regulator YP_004111237.1 5337408 D 652103 CDS YP_004111238.1 316936256 10067210 complement(5338269..5338982) 1 NC_014834.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bra:BRADO1679 two-component regulatory system response regulator; SMART: response regulator receiver; winged helix family two component transcriptional regulator 5338982 10067210 Rpdx1_4964 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004111238.1 5338269 R 652103 CDS YP_004111239.1 316936257 10067211 complement(5339056..5339772) 1 NC_014834.1 KEGG: nha:Nham_0639 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 5339772 10067211 Rpdx1_4965 Rhodopseudomonas palustris DX-1 phosphate uptake regulator PhoU YP_004111239.1 5339056 R 652103 CDS YP_004111240.1 316936258 10067212 complement(5339796..5340620) 1 NC_014834.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: nha:Nham_0638 phosphate ABC transporter permease; SMART: AAA ATPase; phosphate ABC transporter ATPase 5340620 10067212 Rpdx1_4966 Rhodopseudomonas palustris DX-1 phosphate ABC transporter ATPase YP_004111240.1 5339796 R 652103 CDS YP_004111241.1 316936259 10067213 complement(5340617..5341480) 1 NC_014834.1 KEGG: bra:BRADO1676 high-affinity phosphate ABC transporter membrane protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 5341480 10067213 Rpdx1_4967 Rhodopseudomonas palustris DX-1 phosphate ABC transporter permease YP_004111241.1 5340617 R 652103 CDS YP_004111242.1 316936260 10067214 complement(5341481..5342482) 1 NC_014834.1 KEGG: bja:blr1092 phosphate ABC transporter permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 5342482 10067214 Rpdx1_4968 Rhodopseudomonas palustris DX-1 phosphate ABC transporter permease YP_004111242.1 5341481 R 652103 CDS YP_004111243.1 316936261 10067215 complement(5342715..5343725) 1 NC_014834.1 KEGG: oca:OCAR_4646 phosphate ABC transporter; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; phosphate ABC transporter substrate-binding protein 5343725 10067215 Rpdx1_4969 Rhodopseudomonas palustris DX-1 phosphate ABC transporter substrate-binding protein YP_004111243.1 5342715 R 652103 CDS YP_004111244.1 316936262 10067216 complement(5343858..5345222) 1 NC_014834.1 KEGG: bja:blr1090 phosphate regulon, two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase 5345222 10067216 Rpdx1_4970 Rhodopseudomonas palustris DX-1 histidine kinase YP_004111244.1 5343858 R 652103 CDS YP_004111245.1 316936263 10067217 complement(5345226..5346260) 1 NC_014834.1 KEGG: bra:BRADO6783 hypothetical protein; hypothetical protein 5346260 10067217 Rpdx1_4971 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111245.1 5345226 R 652103 CDS YP_004111246.1 316936264 10067218 complement(5346493..5346789) 1 NC_014834.1 KEGG: nha:Nham_0632 hypothetical protein; hypothetical protein 5346789 10067218 Rpdx1_4972 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111246.1 5346493 R 652103 CDS YP_004111247.1 316936265 10067219 complement(5346793..5348187) 1 NC_014834.1 PFAM: OmpA/MotB domain protein; KEGG: bja:blr1084 hypothetical protein; OmpA/MotB domain-containing protein 5348187 10067219 Rpdx1_4973 Rhodopseudomonas palustris DX-1 OmpA/MotB domain-containing protein YP_004111247.1 5346793 R 652103 CDS YP_004111248.1 316936266 10067220 5348342..5349400 1 NC_014834.1 PFAM: polysaccharide deacetylase; KEGG: nha:Nham_0630 polysaccharide deacetylase; polysaccharide deacetylase 5349400 10067220 Rpdx1_4974 Rhodopseudomonas palustris DX-1 polysaccharide deacetylase YP_004111248.1 5348342 D 652103 CDS YP_004111249.1 316936267 10067221 5349461..5350267 1 NC_014834.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_0751 putative short-chain dehydrogenase/reductase (SDR); short-chain dehydrogenase/reductase SDR 5350267 10067221 Rpdx1_4975 Rhodopseudomonas palustris DX-1 short-chain dehydrogenase/reductase SDR YP_004111249.1 5349461 D 652103 CDS YP_004111250.1 316936268 10067222 5350488..5351405 1 NC_014834.1 PFAM: shikimate kinase; helix-turn-helix domain protein; KEGG: bja:bll1076 anaerobic benzoate catabolism transcriptional regulator; SMART: helix-turn-helix domain protein; XRE family transcriptional regulator with shikimate kinase activity 5351405 10067222 Rpdx1_4976 Rhodopseudomonas palustris DX-1 XRE family transcriptional regulator with shikimate kinase activity YP_004111250.1 5350488 D 652103 CDS YP_004111251.1 316936269 10067223 complement(5351413..5352741) 1 NC_014834.1 PFAM: extracellular solute-binding protein family 1; KEGG: nha:Nham_3686 extracellular solute-binding protein; family 1 extracellular solute-binding protein 5352741 10067223 Rpdx1_4977 Rhodopseudomonas palustris DX-1 family 1 extracellular solute-binding protein YP_004111251.1 5351413 R 652103 CDS YP_004111252.1 316936270 10067224 5352947..5355028 1 NC_014834.1 KEGG: bja:bll1031 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 5355028 10067224 Rpdx1_4978 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004111252.1 5352947 D 652103 CDS YP_004111253.1 316936271 10067225 5354998..5356737 1 NC_014834.1 TIGRFAM: phage head-tail adaptor; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: nha:Nham_3684 response regulator receiver sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; response regulator receiver sensor signal transduction histidine kinase 5356737 10067225 Rpdx1_4979 Rhodopseudomonas palustris DX-1 response regulator receiver sensor signal transduction histidine kinase YP_004111253.1 5354998 D 652103 CDS YP_004111254.1 316936272 10067226 5356734..5357474 1 NC_014834.1 KEGG: bja:bll1029 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 5357474 10067226 Rpdx1_4980 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004111254.1 5356734 D 652103 CDS YP_004111255.1 316936273 10067227 5357707..5358318 1 NC_014834.1 KEGG: bra:BRADO6834 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; ECF subfamily RNA polymerase sigma-24 subunit 5358318 10067227 Rpdx1_4981 Rhodopseudomonas palustris DX-1 ECF subfamily RNA polymerase sigma-24 subunit YP_004111255.1 5357707 D 652103 CDS YP_004111256.1 316936274 10067228 5358853..5360259 1 NC_014834.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: oca:OCAR_4639 cytochrome d ubiquinol oxidase subunit 1; cytochrome bd ubiquinol oxidase subunit I 5360259 10067228 Rpdx1_4982 Rhodopseudomonas palustris DX-1 cytochrome bd ubiquinol oxidase subunit I YP_004111256.1 5358853 D 652103 CDS YP_004111257.1 316936275 10067229 5360282..5361286 1 NC_014834.1 KEGG: oca:OCAR_4638 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 5361286 10067229 Rpdx1_4983 Rhodopseudomonas palustris DX-1 cytochrome d ubiquinol oxidase subunit II YP_004111257.1 5360282 D 652103 CDS YP_004111258.1 316936276 10067230 5361460..5362047 1 NC_014834.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bra:BRADO6837 putative ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 5362047 10067230 Rpdx1_4984 Rhodopseudomonas palustris DX-1 ErfK/YbiS/YcfS/YnhG family protein YP_004111258.1 5361460 D 652103 CDS YP_004111259.1 316936277 10067231 5362090..5363124 1 NC_014834.1 KEGG: bra:BRADO6838 general L-amino acid-binding periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 5363124 10067231 Rpdx1_4985 Rhodopseudomonas palustris DX-1 family 3 extracellular solute-binding protein YP_004111259.1 5362090 D 652103 CDS YP_004111260.1 316936278 10067232 complement(5363465..5364604) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1022 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 5364604 10067232 Rpdx1_4986 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004111260.1 5363465 R 652103 CDS YP_004111261.1 316936279 10067233 complement(5364760..5365944) 1 NC_014834.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bja:blr1021 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 5365944 10067233 Rpdx1_4987 Rhodopseudomonas palustris DX-1 acyl-CoA dehydrogenase domain-containing protein YP_004111261.1 5364760 R 652103 CDS YP_004111262.1 316936280 10067234 5366110..5366655 1 NC_014834.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bbt:BBta_0701 hypothetical protein; carboxymuconolactone decarboxylase 5366655 10067234 Rpdx1_4988 Rhodopseudomonas palustris DX-1 carboxymuconolactone decarboxylase YP_004111262.1 5366110 D 652103 CDS YP_004111263.1 316936281 10067236 complement(5367972..5369219) 1 NC_014834.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr1017 MFS permease; major facilitator superfamily protein 5369219 10067236 Rpdx1_4990 Rhodopseudomonas palustris DX-1 major facilitator superfamily protein YP_004111263.1 5367972 R 652103 CDS YP_004111264.1 316936282 10067237 complement(5369295..5370011) 1 NC_014834.1 PFAM: protein of unknown function DUF938; KEGG: bbt:BBta_0698 hypothetical protein; hypothetical protein 5370011 10067237 Rpdx1_4991 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111264.1 5369295 R 652103 CDS YP_004111265.1 316936283 10067238 5370457..5372568 1 NC_014834.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: bja:bll4766 hypothetical protein; TonB-dependent receptor plug 5372568 10067238 Rpdx1_4992 Rhodopseudomonas palustris DX-1 TonB-dependent receptor plug YP_004111265.1 5370457 D 652103 CDS YP_004111266.1 316936284 10067239 5372702..5372989 1 NC_014834.1 KEGG: nwi:Nwi_2376 hypothetical protein; hypothetical protein 5372989 10067239 Rpdx1_4993 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111266.1 5372702 D 652103 CDS YP_004111267.1 316936285 10067240 5373161..5373373 1 NC_014834.1 KEGG: fma:FMG_0036 N-acetylmuramoyl-L-alanine amidase; hypothetical protein 5373373 10067240 Rpdx1_4994 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111267.1 5373161 D 652103 CDS YP_004111268.1 316936286 10067241 5373782..5375002 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_7080 branched chain amino acid ABC transporter periplasmic-binding protein; extracellular ligand-binding receptor 5375002 10067241 Rpdx1_4995 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004111268.1 5373782 D 652103 CDS YP_004111269.1 316936287 10067242 5375257..5375910 1 NC_014834.1 KEGG: bbt:BBta_0686 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter-like protein 5375910 10067242 Rpdx1_4996 Rhodopseudomonas palustris DX-1 ABC transporter-like protein YP_004111269.1 5375257 D 652103 CDS YP_004111270.1 316936288 10067243 5375907..5378372 1 NC_014834.1 PFAM: protein of unknown function DUF214; KEGG: nha:Nham_0345 hypothetical protein; hypothetical protein 5378372 10067243 Rpdx1_4997 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111270.1 5375907 D 652103 CDS YP_004111271.1 316936289 10067244 5378362..5379447 1 NC_014834.1 KEGG: nha:Nham_0344 hypothetical protein; hypothetical protein 5379447 10067244 Rpdx1_4998 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111271.1 5378362 D 652103 CDS YP_004111272.1 316936290 10067245 5379512..5379904 1 NC_014834.1 PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); KEGG: bja:bll0998 hypothetical protein; eicosanoid and glutathione metabolism membrane-associated protein 5379904 10067245 Rpdx1_4999 Rhodopseudomonas palustris DX-1 eicosanoid and glutathione metabolism membrane-associated protein YP_004111272.1 5379512 D 652103 CDS YP_004111273.1 316936291 10067246 complement(5380097..5381290) 1 NC_014834.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr0998 periplasmic substrate binding protein; extracellular ligand-binding receptor 5381290 10067246 Rpdx1_5000 Rhodopseudomonas palustris DX-1 extracellular ligand-binding receptor YP_004111273.1 5380097 R 652103 CDS YP_004111274.1 316936292 10067247 complement(5381376..5383061) 1 NC_014834.1 KEGG: oca:OCAR_5916 hypothetical protein; hypothetical protein 5383061 10067247 Rpdx1_5001 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111274.1 5381376 R 652103 CDS YP_004111275.1 316936293 10067248 complement(5383149..5385035) 1 NC_014834.1 KEGG: bbt:BBta_1326 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; Heat shock protein Hsp90-like protein 5385035 10067248 Rpdx1_5002 Rhodopseudomonas palustris DX-1 Heat shock protein Hsp90-like protein YP_004111275.1 5383149 R 652103 CDS YP_004111276.1 316936294 10067249 complement(5385124..5386503) 1 NC_014834.1 KEGG: nha:Nham_1886 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 5386503 10067249 Rpdx1_5003 Rhodopseudomonas palustris DX-1 integral membrane sensor signal transduction histidine kinase YP_004111276.1 5385124 R 652103 CDS YP_004111277.1 316936295 10067250 complement(5386500..5387165) 1 NC_014834.1 KEGG: nha:Nham_1885 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; winged helix family two component transcriptional regulator 5387165 10067250 Rpdx1_5004 Rhodopseudomonas palustris DX-1 winged helix family two component transcriptional regulator YP_004111277.1 5386500 R 652103 CDS YP_004111278.1 316936296 10067251 complement(5387165..5387503) 1 NC_014834.1 KEGG: nha:Nham_1884 peptidase; hypothetical protein 5387503 10067251 Rpdx1_5005 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111278.1 5387165 R 652103 CDS YP_004111279.1 316936297 10067252 complement(5387588..5387896) 1 NC_014834.1 KEGG: mch:Mchl_2421 major facilitator superfamily MFS_1; hypothetical protein 5387896 10067252 Rpdx1_5006 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111279.1 5387588 R 652103 CDS YP_004111280.1 316936298 10067253 complement(5388080..5389204) 1 NC_014834.1 TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: bja:blr0961 methylthioribose-1-phosphate isomerase; PFAM: initiation factor 2B related; translation initiation factor, aIF-2BI family 5389204 10067253 Rpdx1_5007 Rhodopseudomonas palustris DX-1 translation initiation factor, aIF-2BI family YP_004111280.1 5388080 R 652103 CDS YP_004111281.1 316936299 10067254 complement(5389316..5390191) 1 NC_014834.1 TIGRFAM: methylthioadenosine phosphorylase; KEGG: bra:BRADO6904 5'-methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1; methylthioadenosine phosphorylase 5390191 10067254 Rpdx1_5008 Rhodopseudomonas palustris DX-1 methylthioadenosine phosphorylase YP_004111281.1 5389316 R 652103 CDS YP_004111282.1 316936300 10067255 5390482..5391621 1 NC_014834.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bja:bll0995 maleylacetate reductase; iron-containing alcohol dehydrogenase 5391621 10067255 Rpdx1_5009 Rhodopseudomonas palustris DX-1 iron-containing alcohol dehydrogenase YP_004111282.1 5390482 D 652103 CDS YP_004111283.1 316936301 10067256 5391702..5393252 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll0994 acyl-CoA synthetase; AMP-dependent synthetase and ligase 5393252 10067256 Rpdx1_5010 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004111283.1 5391702 D 652103 CDS YP_004111284.1 316936302 10067257 5393507..5395360 1 NC_014834.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; helicase domain protein; DEAD/DEAH box helicase domain protein; HRDC domain protein; KEGG: bbt:BBta_6924 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase ; helicase domain protein; HRDC domain protein; ATP-dependent DNA helicase RecQ 5395360 10067257 Rpdx1_5011 Rhodopseudomonas palustris DX-1 ATP-dependent DNA helicase RecQ YP_004111284.1 5393507 D 652103 CDS YP_004111285.1 316936303 10067258 5395441..5395668 1 NC_014834.1 KEGG: azc:AZC_4413 hypothetical protein; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; FmdB family regulatory protein 5395668 10067258 Rpdx1_5012 Rhodopseudomonas palustris DX-1 FmdB family regulatory protein YP_004111285.1 5395441 D 652103 CDS YP_004111286.1 316936304 10067259 complement(5395693..5395986) 1 NC_014834.1 KEGG: nha:Nham_0415 hypothetical protein; hypothetical protein 5395986 10067259 Rpdx1_5013 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111286.1 5395693 R 652103 CDS YP_004111287.1 316936305 10067260 5396227..5397813 1 NC_014834.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll0843 putative crotonobetaine/carnitine-CoA ligase; AMP-dependent synthetase and ligase 5397813 10067260 Rpdx1_5014 Rhodopseudomonas palustris DX-1 AMP-dependent synthetase and ligase YP_004111287.1 5396227 D 652103 CDS YP_004111288.1 316936306 10067261 complement(5397928..5399031) 1 NC_014834.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: nha:Nham_4035 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 5399031 10067261 Rpdx1_5015 Rhodopseudomonas palustris DX-1 response regulator receiver modulated metal dependent phosphohydrolase YP_004111288.1 5397928 R 652103 CDS YP_004111289.1 316936307 10067262 5399107..5399616 1 NC_014834.1 KEGG: nha:Nham_4036 hypothetical protein; hypothetical protein 5399616 10067262 Rpdx1_5016 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111289.1 5399107 D 652103 CDS YP_004111290.1 316936308 10067263 5399673..5400344 1 NC_014834.1 KEGG: bbt:BBta_7870 putative carboxymethylenebutenolidase; carboxymethylenebutenolidase 5400344 10067263 Rpdx1_5017 Rhodopseudomonas palustris DX-1 carboxymethylenebutenolidase YP_004111290.1 5399673 D 652103 CDS YP_004111291.1 316936309 10067264 complement(5400436..5401086) 1 NC_014834.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: bja:blr0835 polysaccharide export protein; polysaccharide export protein 5401086 10067264 Rpdx1_5018 Rhodopseudomonas palustris DX-1 polysaccharide export protein YP_004111291.1 5400436 R 652103 CDS YP_004111292.1 316936310 10067265 complement(5401255..5401911) 1 NC_014834.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: bja:blr0834 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 5401911 10067265 Rpdx1_5019 Rhodopseudomonas palustris DX-1 peptide methionine sulfoxide reductase YP_004111292.1 5401255 R 652103 CDS YP_004111293.1 316936311 10067266 complement(5402080..5402397) 1 NC_014834.1 KEGG: bja:blr0833 hypothetical protein; hypothetical protein 5402397 10067266 Rpdx1_5020 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111293.1 5402080 R 652103 CDS YP_004111294.1 316936312 10067267 5402756..5403022 1 NC_014834.1 KEGG: bbt:BBta_7874 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; 30S ribosomal protein S20 5403022 10067267 Rpdx1_5021 Rhodopseudomonas palustris DX-1 30S ribosomal protein S20 YP_004111294.1 5402756 D 652103 CDS YP_004111295.1 316936313 10067268 complement(5403811..5403978) 1 NC_014834.1 hypothetical protein 5403978 10067268 Rpdx1_5022 Rhodopseudomonas palustris DX-1 hypothetical protein YP_004111295.1 5403811 R 652103 CDS