-- dump date   	20140620_032402
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_778942.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_778943.1	binds the polymerase to DNA and acts as a sliding clamp
YP_778944.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_778945.1	KEGG: rpc:RPC_0004 hypothetical protein
YP_778946.1	negatively supercoils closed circular double-stranded DNA
YP_778947.1	PFAM: HWE histidine kinase; KEGG: nwi:Nwi_0559 HWE histidine kinase
YP_778948.1	KEGG: bja:blr2658 hypothetical protein
YP_778949.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: rpc:RPC_0007 transcriptional regulator, AsnC family
YP_778950.1	KEGG: rpb:RPB_0008 hypothetical protein
YP_778952.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: rpc:RPC_0008 cytochrome oxidase maturation protein, cbb3-type
YP_778953.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rpc:RPC_0009 copper-translocating P-type ATPase
YP_778954.1	PFAM: FixH family protein; KEGG: rpc:RPC_0010 FixH
YP_778955.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpc:RPC_0011 4Fe-4S ferredoxin, iron-sulfur binding domain
YP_778956.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; KEGG: rpc:RPC_0012 cytochrome c oxidase, cbb3-type, subunit III
YP_778957.1	PFAM: Cbb3-type cytochrome oxidase component; KEGG: rpc:RPC_0013 Cbb3-type cytochrome oxidase component
YP_778958.1	CcoO; FixO
YP_778959.1	CcoN; FixN
YP_778960.1	KEGG: rpc:RPC_0016 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein
YP_778961.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpd:RPD_0728 short-chain dehydrogenase/reductase SDR
YP_778962.1	PFAM: DSBA oxidoreductase; KEGG: rpd:RPD_0727 DsbA oxidoreductase
YP_778963.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: bja:bll0585 glutathione S-transferase family protein
YP_778964.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_0020 short-chain dehydrogenase/reductase SDR
YP_778965.1	KEGG: rpc:RPC_0021 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_778966.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_0022 major facilitator superfamily MFS_1
YP_778967.1	involved in de novo purine biosynthesis
YP_778968.1	PFAM: Heparinase II/III family protein; KEGG: rpc:RPC_0024 heparinase II/III-like
YP_778969.1	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; Methyltransferase type 11; KEGG: rpc:RPC_0025 Fmu (Sun)
YP_778970.1	PFAM: protein of unknown function DUF1674; KEGG: nha:Nham_0198 protein of unknown function DUF1674
YP_778971.1	KEGG: rpb:RPB_0367 conserved hypothetical protein PA1030
YP_778972.1	KEGG: rpb:RPB_0368 hypothetical protein
YP_778973.1	PFAM: nuclease (SNase domain protein); KEGG: rpc:RPC_0029 nuclease (SNase-like)
YP_778974.1	PFAM: Alkaline phosphatase; KEGG: rpc:RPC_0030 alkaline phosphatase
YP_778975.1	catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis
YP_778976.1	PFAM: phosphoesterase, PA-phosphatase related; KEGG: rpc:RPC_0032 phosphoesterase, PA-phosphatase related
YP_778977.1	KEGG: rpd:RPD_0711 hypothetical protein
YP_778978.1	PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: rpd:RPD_0710 metal-dependent phosphohydrolase, HD subdomain
YP_778979.1	TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: rpd:RPD_0709 hypothetical protein
YP_778980.1	KEGG: rpc:RPC_0036 hypothetical protein
YP_778981.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpd:RPD_0707 alcohol dehydrogenase, zinc-binding
YP_778982.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_0038 amine oxidase
YP_778984.1	PFAM: GCN5-related N-acetyltransferase; FR47 domain protein; KEGG: rpc:RPC_0039 GCN5-related N-acetyltransferase
YP_778985.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_778986.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rpc:RPC_0041 peptidase M20
YP_778987.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4406 methyl-accepting chemotaxis sensory transducer
YP_778988.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_778989.1	PFAM: protein of unknown function DUF167; KEGG: rpc:RPC_0058 protein of unknown function DUF167
YP_778990.1	PFAM: protein of unknown function YGGT; KEGG: rpd:RPD_0692 protein of unknown function YGGT
YP_778991.1	KEGG: rpd:RPD_0690 protein of unknown function DUF1486
YP_778993.1	PFAM: protein of unknown function DUF1486; KEGG: rpd:RPD_0690 protein of unknown function DUF1486
YP_778994.1	Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group
YP_778995.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_0055 short-chain dehydrogenase/reductase SDR
YP_778996.1	PFAM: protein of unknown function DUF1332; KEGG: rpc:RPC_0054 protein of unknown function DUF1332
YP_778997.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rpc:RPC_0052 adenylate/guanylate cyclase
YP_778998.1	PFAM: cytochrome P450; KEGG: rpb:RPB_0116 cytochrome P450
YP_778999.1	PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: rpd:RPD_0685 protein of unknown function DUF894, DitE
YP_779000.1	KEGG: rpd:RPD_0684 hypothetical protein
YP_779001.1	KEGG: rpc:RPC_3080 conserved hypothetical protein, putative DNA helicase
YP_779002.1	PFAM: protein of unknown function DUF1311
YP_779003.1	PFAM: HemY domain protein; KEGG: rpc:RPC_0049 HemY-like
YP_779004.1	KEGG: rpc:RPC_0048 hypothetical protein
YP_779005.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: rpc:RPC_0047 uroporphyrinogen III synthase HEM4
YP_779006.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_779007.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_779008.1	PFAM: protein of unknown function DUF55; KEGG: rpd:RPD_0472 protein of unknown function DUF589
YP_779009.1	KEGG: rpc:RPC_0043 hypothetical protein
YP_779010.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_779011.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_1939 hypothetical protein
YP_779012.1	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_1129 phenylacetic acid degradation-related protein
YP_779014.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA0995 probable acyl-CoA dehydrogenase
YP_779015.1	TIGRFAM: YbhB and YbcL; PFAM: PEBP family protein; KEGG: nha:Nham_3239 YbhB and YbcL
YP_779017.1	KEGG: bur:Bcep18194_B0441 outer membrane protein, haemagluttinin-like
YP_779019.1	PFAM: Carbamoyltransferase; KEGG: rpc:RPC_1437 carbamoyltransferase
YP_779021.1	KEGG: sdn:Sden_3472 hypothetical protein
YP_779022.1	PFAM: cytochrome P450; KEGG: bld:BLi00771 cytochrome P450 enzyme; RBL02770
YP_779023.1	TIGRFAM: methyltransferase FkbM family; KEGG: rbe:RBE_0190 hypothetical protein
YP_779024.1	SMART: nuclease (SNase domain protein); KEGG: rpd:RPD_1131 nuclease (SNase-like)
YP_779025.1	PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rpb:RPB_1714 transglutaminase-like
YP_779026.1	PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rpa:RPA3753 DUF404
YP_779027.1	PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rpc:RPC_1701 transglutaminase-like
YP_779031.1	KEGG: rpc:RPC_0583 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with AS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_779032.1	D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm
YP_779033.1	KEGG: aba:Acid345_3759 hypothetical protein
YP_779034.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
YP_779035.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: rpb:RPB_0058 methionine aminopeptidase, type I
YP_779037.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMc04289 hypothetical protein
YP_779038.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: sme:SMc04287 hypothetical protein
YP_779039.1	PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMc04283 putative transmembrane protein
YP_779040.1	PFAM: Methyltransferase type 11; KEGG: tdn:Tmden_0189 methylase involved in ubiquinone/menaquinone biosynthesis-like
YP_779041.1	KEGG: bxe:Bxe_A3045 hypothetical protein
YP_779042.1	PFAM: Ku domain protein; KEGG: rpb:RPB_0698 Ku-like protein
YP_779043.1	KEGG: rpc:RPC_0576 hypothetical protein
YP_779044.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_779045.1	KEGG: rpd:RPD_0256 hypothetical protein
YP_779046.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rpc:RPC_0573 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_779047.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_0572 binding-protein-dependent transport systems inner membrane component
YP_779048.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0571 ABC transporter related
YP_779049.1	KEGG: rpa:RPA0470 perplasmic binding protein of ABC transporter
YP_779050.1	PFAM: Creatininase; KEGG: rpb:RPB_0569 creatininase
YP_779051.1	KEGG: rpc:RPC_0568 hypothetical protein
YP_779052.1	PFAM: ferredoxin-dependent glutamate synthase; KEGG: rpc:RPC_0567 ferredoxin-dependent glutamate synthase
YP_779053.1	KEGG: rpd:RPD_0263 hypothetical protein
YP_779054.1	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rpd:RPD_0264 FolC bifunctional protein
YP_779055.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr0103 probable oxidoreductase
YP_779056.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: nmu:Nmul_A0911 tetratricopeptide TPR_4
YP_779057.1	PFAM: protein of unknown function DUF937; KEGG: rpc:RPC_0555 protein of unknown function DUF937
YP_779058.1	KEGG: rpc:RPC_0554 hypothetical protein
YP_779059.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KEGG: rpc:RPC_0553 short-chain dehydrogenase/reductase SDR
YP_779060.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_0270 acyl-CoA dehydrogenase-like
YP_779061.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpd:RPD_0271 acyl-CoA dehydrogenase-like
YP_779062.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_0552 enoyl-CoA hydratase/isomerase
YP_779063.1	KEGG: rpc:RPC_0551 nuclease (SNase-like)
YP_779064.1	PFAM: peptidase M48, Ste24p; KEGG: rpc:RPC_0550 peptidase M48, Ste24p
YP_779065.1	PFAM: transcription factor CarD; KEGG: rpc:RPC_0548 transcriptional regulator, CarD family
YP_779066.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: bja:bll0157 ferredoxin
YP_779067.1	PFAM: RNA-binding S4 domain protein; KEGG: rpd:RPD_0280 RNA-binding S4
YP_779068.1	PFAM: helicase domain protein; KEGG: rpc:RPC_0545 helicase-like
YP_779069.1	KEGG: rpc:RPC_0544 hypothetical protein
YP_779070.1	required for 70S ribosome assembly
YP_779071.1	KEGG: rpc:RPC_0542 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_779072.1	KEGG: rpc:RPC_0541 hypothetical protein
YP_779073.1	KEGG: rpc:RPC_0540 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase, CobT subunit; SMART: von Willebrand factor, type A
YP_779074.1	PFAM: protein of unknown function DUF29; KEGG: rpc:RPC_0539 protein of unknown function DUF29
YP_779075.1	PFAM: protein of unknown function DUF29; KEGG: rpc:RPC_0539 protein of unknown function DUF29
YP_779076.1	KEGG: rpc:RPC_0538 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_779077.1	KEGG: rpc:RPC_0537 DedA family
YP_779078.1	PFAM: heat shock protein DnaJ domain protein; KEGG: rpc:RPC_0536 heat shock protein DnaJ-like
YP_779079.1	PFAM: BolA family protein; KEGG: rpc:RPC_0535 BolA-like protein
YP_779080.1	PFAM: protein of unknown function DUF949; KEGG: rpc:RPC_0527 protein of unknown function DUF949
YP_779081.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
YP_779082.1	TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: rpc:RPC_0530 tyrosine recombinase XerD
YP_779083.1	KEGG: rpd:RPD_0295 hypothetical protein
YP_779084.1	catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_779085.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_779086.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rpa:RPA0502 probable HlyC/CorC family of transporters with 2 CBS domains
YP_779087.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_779088.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpc:RPC_0525 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_779089.1	bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate
YP_779090.1	TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: rpd:RPD_0110 NUDIX hydrolase
YP_779091.1	PFAM: Methyltransferase type 11; KEGG: rpc:RPC_0522 methyltransferase
YP_779092.1	KEGG: rpd:RPD_0108 hypothetical protein
YP_779093.1	PFAM: phosphoribosyltransferase; KEGG: rpd:RPD_0107 phosphoribosyltransferase
YP_779094.1	TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: rpc:RPC_0519 glutaredoxin, GrxC
YP_779095.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rpc:RPC_0518 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_779096.1	PFAM: protein of unknown function DUF1178; KEGG: rpb:RPB_0023 protein of unknown function DUF1178
YP_779097.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_0516 protein of unknown function DUF6, transmembrane
YP_779098.1	Involved in ubiquinone biosynthesis
YP_779099.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.
YP_779100.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: rpc:RPC_0513 PTSINtr with GAF domain, PtsP
YP_779101.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_779102.1	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 11; KEGG: rpc:RPC_0511 modification methylase, HemK family
YP_779103.1	KEGG: rpc:RPC_0510 hypothetical protein
YP_779104.1	PFAM: Methyltransferase type 11; KEGG: rpc:RPC_0509 methyltransferase type 11
YP_779105.1	PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_0508 hydroxyacylglutathione hydrolase
YP_779106.1	PFAM: protein of unknown function DUF985; KEGG: rpc:RPC_0507 protein of unknown function DUF985
YP_779107.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_0506 protein of unknown function DUF6, transmembrane
YP_779108.1	TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Acetoacetyl-CoA reductase; KEGG: rpc:RPC_0505 acetoacetyl-CoA reductase
YP_779109.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis
YP_779110.1	TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: rpc:RPC_0503 polyhydroxyalkanoate synthesis repressor PhaR
YP_779111.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpc:RPC_0502 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
YP_779112.1	KEGG: rpc:RPC_0501 hypothetical protein
YP_779113.1	KEGG: rpc:RPC_0500 hypothetical protein
YP_779114.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_779115.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
YP_779116.1	PFAM: Polyprenyl synthetase; KEGG: rpc:RPC_0497 polyprenyl synthetase
YP_779117.1	PFAM: protein of unknown function DUF1345; KEGG: rpc:RPC_0496 protein of unknown function DUF1345
YP_779118.1	KEGG: rpc:RPC_0495 hypothetical protein
YP_779119.1	PFAM: BLUF domain protein; KEGG: rpc:RPC_0494 BLUF
YP_779120.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpc:RPC_0493 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
YP_779121.1	TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: rpc:RPC_0492 Na+/H+ antiporter
YP_779122.1	PFAM: plasmid stabilization system; KEGG: rpc:RPC_4130 plasmid stabilization system
YP_779123.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_779124.1	KEGG: nha:Nham_4317 hypothetical protein
YP_779125.1	KEGG: pol:Bpro_5035 hypothetical protein
YP_779126.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_0490 protein of unknown function DUF6, transmembrane
YP_779127.1	PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0489 ferric uptake regulator, FUR family
YP_779128.1	PFAM: regulatory protein, MarR; KEGG: rpc:RPC_0488 transcriptional regulator, MarR family
YP_779129.1	PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: rpc:RPC_0487 secretion protein HlyD
YP_779130.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_0486 drug resistance transporter EmrB/QacA subfamily
YP_779131.1	KEGG: rpc:RPC_0485 twin-arginine translocation pathway signal; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: manganese and iron superoxide dismutase
YP_779132.1	KEGG: rpc:RPC_0484 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein
YP_779133.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_779134.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_779135.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_779136.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_779137.1	PFAM: protein of unknown function DUF448; KEGG: rpc:RPC_0479 protein of unknown function DUF448
YP_779138.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_779139.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
YP_779140.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_779141.1	PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_0473 transcriptional regulator, XRE family
YP_779142.1	Transfers the fatty acyl group on membrane lipoproteins
YP_779143.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: bja:bll0792 magnesium and cobalt efflux protein
YP_779144.1	PFAM: protein of unknown function UPF0054; KEGG: rpc:RPC_0470 protein of unknown function UPF0054
YP_779145.1	PFAM: PhoH family protein; KH, type 1, domain protein; KEGG: rpc:RPC_0469 PhoH-like protein
YP_779146.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_779147.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_0467 HAD-superfamily hydrolase subfamily IA, variant 3
YP_779148.1	PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0466 ferric uptake regulator, FUR family
YP_779149.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_0465 ribosomal-protein-alanine acetyltransferase
YP_779150.1	PFAM: peptidase M22, glycoprotease; KEGG: rpc:RPC_0464 peptidase M22, glycoprotease
YP_779151.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: rpc:RPC_0463 nitrogen-fixing NifU-like
YP_779152.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0461 ABC transporter related
YP_779153.1	PFAM: UspA domain protein; KEGG: rpc:RPC_0460 hypothetical protein
YP_779156.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_779157.1	TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: rpc:RPC_0458 integral membrane protein MviN
YP_779158.1	PFAM: PfkB domain protein; KEGG: rpd:RPD_0251 PfkB
YP_779159.1	PFAM: beta-lactamase; KEGG: rpc:RPC_0456 beta-lactamase
YP_779160.1	KEGG: rpc:RPC_0455 hypothetical protein
YP_779161.1	KEGG: rpd:RPD_0255 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase
YP_779162.1	PFAM: protein of unknown function DUF204; KEGG: pst:PSPTO3755 hypothetical protein
YP_779163.1	KEGG: rpc:RPC_0453 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase
YP_779164.1	PFAM: protein of unknown function DUF45; KEGG: rpb:RPB_0064 protein of unknown function DUF45
YP_779165.1	TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: rpc:RPC_0356 polyhydroxyalkanoate depolymerase, intracellular
YP_779166.1	PFAM: ABC-2 type transporter; KEGG: rpc:RPC_0357 ABC-2
YP_779167.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0358 ABC transporter related
YP_779168.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_0359 periplasmic sensor signal transduction histidine kinase
YP_779169.1	PFAM: response regulator receiver; KEGG: rpa:RPA0571 two-component transcriptional regulator RegR, fis family
YP_779170.1	PFAM: protein of unknown function DUF1052; KEGG: rpc:RPC_0375 protein of unknown function DUF1052
YP_779171.1	SMART: von Willebrand factor, type A; KEGG: rpa:RPA0569 hypothetical protein
YP_779172.1	PFAM: beta-lactamase domain protein; KEGG: rpb:RPB_0715 beta-lactamase-like
YP_779173.1	PFAM: protein of unknown function DUF1236; KEGG: rpc:RPC_0372 hypothetical protein
YP_779174.1	KEGG: rpb:RPB_0712 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_779175.1	TIGRFAM: esterase, PHB depolymerase family; KEGG: rpc:RPC_0371 esterase, PHB depolymerase
YP_779176.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rpd:RPD_0139 chromate transporter
YP_779177.1	KEGG: rpc:RPC_0370 hypothetical protein
YP_779178.1	KEGG: rpc:RPC_0368 hypothetical protein
YP_779179.1	PFAM: MmgE/PrpD family protein; KEGG: rpd:RPD_0146 MmgE/PrpD
YP_779180.1	PFAM: PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: rpa:RPA0561 hypothetical protein
YP_779181.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_0365 peptidoglycan-binding domain 1
YP_779182.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: rpc:RPC_0364 UBA/ThiF-type NAD/FAD binding fold
YP_779183.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rpa:RPA0422 2-hydroxyacid dehydrogenase
YP_779184.1	PFAM: protein of unknown function DUF1058; KEGG: rpc:RPC_0353 protein of unknown function DUF1058
YP_779185.1	This protein performs the mismatch recognition step during the DNA repair process
YP_779187.1	catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA
YP_779188.1	PFAM: transposase, IS4 family protein; KEGG: rpc:RPC_2070 transposase, IS4
YP_779189.1	PFAM: transposase, IS4 family protein; KEGG: rpc:RPC_2070 transposase, IS4
YP_779190.1	PFAM: Carboxylesterase, type B; KEGG: xac:XAC1213 carboxylesterase, type B
YP_779191.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_0362 transcriptional regulator, LysR family
YP_779192.1	KEGG: rpa:RPA0429 catalase/peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: heme peroxidase
YP_779193.1	PFAM: Glutathione S-transferase, N-terminal domain; KEGG: nha:Nham_0039 glutathione S-transferase-like
YP_779194.1	Catalyzes a key regulatory step in fatty acid biosynthesis
YP_779195.1	FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_779196.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_779197.1	PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0350 ferric uptake regulator, FUR family
YP_779198.1	PFAM: OsmC family protein; KEGG: bja:blr0920 hypothetical protein
YP_779199.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_779200.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpb:RPB_0035 multi-sensor hybrid histidine kinase
YP_779201.1	KEGG: rpb:RPB_0036 hypothetical protein
YP_779202.1	PFAM: protein of unknown function DUF1304; KEGG: rpb:RPB_0037 protein of unknown function DUF1304
YP_779203.1	KEGG: bja:bll0912 hypothetical protein
YP_779204.1	KEGG: rpc:RPC_0343 hypothetical protein
YP_779205.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_779206.1	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria
YP_779207.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rpc:RPC_0163 iojap-related protein
YP_779208.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_779209.1	PFAM: peptidase M23B; KEGG: rpc:RPC_0165 peptidase M23B
YP_779210.1	KEGG: rpd:RPD_0566 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_779211.1	PFAM: protein of unknown function DUF610, YibQ; KEGG: rpc:RPC_0167 protein of unknown function DUF610, YibQ
YP_779212.1	hydrolyzes diadenosine polyphosphate
YP_779213.1	KEGG: rpc:RPC_0169 hypothetical protein
YP_779214.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: rpd:RPD_0562 NAD-dependent epimerase/dehydratase
YP_779215.1	hydrolyzes diadenosine polyphosphate
YP_779216.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_779217.1	SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: rpc:RPC_0172 transcriptional regulator, AraC family
YP_779218.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex
YP_779219.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_779220.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_779221.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_779222.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_779224.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: rpc:RPC_0178 rare lipoprotein A
YP_779225.1	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity
YP_779226.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs
YP_779227.1	KEGG: rpa:RPA0183 hypothetical protein
YP_779228.1	KEGG: rpa:RPA0184 hypothetical protein
YP_779229.1	Catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_779231.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpb:RPB_0275 short-chain dehydrogenase/reductase
YP_779232.1	KEGG: rpc:RPC_0187 hypothetical protein
YP_779233.1	KEGG: rpd:RPD_0549 hypothetical protein
YP_779234.1	KEGG: rpc:RPC_0185 hypothetical protein
YP_779235.1	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA
YP_779236.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_779237.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rpb:RPB_0279 succinyl-CoA synthetase, alpha subunit
YP_779238.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_779239.1	Catalyzes the reversible oxidation of malate to oxaloacetate
YP_779240.1	PFAM: AFG1-family ATPase; KEGG: rpc:RPC_0195 AFG1-like ATPase
YP_779241.1	TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; KEGG: rpc:RPC_0196 2',5' RNA ligase
YP_779242.1	PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rpc:RPC_0197 lipolytic enzyme, G-D-S-L
YP_779243.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0198 ABC transporter related
YP_779244.1	PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_0199 protein of unknown function DUF214
YP_779245.1	PFAM: protein of unknown function UPF0005; KEGG: rpc:RPC_0200 protein of unknown function UPF0005
YP_779246.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpd:RPD_0528 GCN5-related N-acetyltransferase
YP_779247.1	KEGG: nha:Nham_0406 hypothetical protein
YP_779248.1	PFAM: protein of unknown function DUF1223; KEGG: rpc:RPC_0203 protein of unknown function DUF1223
YP_779249.1	Catalyzes the conversion of citrate to isocitrate
YP_779250.1	ATP-binding protein; required for proper cytochrome c maturation
YP_779251.1	TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: rpc:RPC_0206 heme exporter protein CcmB
YP_779252.1	TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: rpc:RPC_0207 heme exporter protein CcmC
YP_779253.1	PFAM: Heme exporter protein D (CcmD); KEGG: rpc:RPC_0208 heme exporter protein D (CcmD)
YP_779254.1	TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: rpc:RPC_0209 periplasmic protein thiol
YP_779255.1	KEGG: rpc:RPC_0210 hypothetical protein
YP_779256.1	Involved in cell division; probably involved in intracellular septation
YP_779257.1	KEGG: rpc:RPC_0212 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase
YP_779258.1	PFAM: pseudouridine synthase; KEGG: rpd:RPD_0516 pseudouridine synthase
YP_779259.1	KEGG: rpc:RPC_0214 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_779260.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_779261.1	PFAM: transcription activator, effector binding; KEGG: rpc:RPC_0216 transcription activator, effector binding
YP_779262.1	PFAM: protein of unknown function DUF541; KEGG: rpc:RPC_0217 protein of unknown function DUF541
YP_779263.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_0218 twin-arginine translocation pathway signal
YP_779264.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_0219 antenna complex, alpha/beta subunit
YP_779265.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpd:RPD_2392 antenna complex, alpha/beta subunit
YP_779266.1	KEGG: rpa:RPA0245 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase
YP_779267.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_779268.1	Essential for efficient processing of 16S rRNA
YP_779269.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_779270.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_779271.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_779272.1	KEGG: rpc:RPC_0064 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; adenylylsulfate kinase; elongation factor Tu, domain 2 protein
YP_779273.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_779274.1	KEGG: rpc:RPC_0062 hypothetical protein
YP_779275.1	KEGG: rpb:RPB_0346 hypothetical protein
YP_779276.1	KEGG: rpc:RPC_0228 hypothetical protein
YP_779277.1	PFAM: protein of unknown function DUF1025; KEGG: rpa:RPA0236 hypothetical protein
YP_779278.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_779279.1	PFAM: HpcH/HpaI aldolase; KEGG: rpc:RPC_0233 citryl-CoA lyase
YP_779280.1	PFAM: carbonic anhydrase; KEGG: rpc:RPC_0234 carbonate dehydratase
YP_779281.1	catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
YP_779282.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_779283.1	PFAM: protein of unknown function DUF1330; KEGG: rpc:RPC_0334 protein of unknown function DUF1330
YP_779284.1	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_779285.1	PFAM: NADPH-dependent FMN reductase; KEGG: rpc:RPC_0332 NADPH-dependent FMN reductase
YP_779286.1	KEGG: rpc:RPC_0331 ribosomal RNA adenine methylase transferase
YP_779287.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_779288.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_779289.1	KEGG: rpc:RPC_0328 hypothetical protein
YP_779290.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
YP_779291.1	Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
YP_779292.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_779293.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_779294.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_779295.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_0322 extracellular ligand-binding receptor
YP_779296.1	TIGRFAM: Protein of unknown function UPF0011; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpc:RPC_0321 protein of unknown function UPF0011
YP_779297.1	PFAM: protein of unknown function UPF0102; KEGG: rpc:RPC_0320 protein of unknown function UPF0102
YP_779298.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_779299.1	KEGG: rpc:RPC_0317 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_779300.1	KEGG: rpc:RPC_0316 hypothetical protein
YP_779301.1	KEGG: rpc:RPC_0315 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_779302.1	KEGG: rpc:RPC_0314 hypothetical protein
YP_779303.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
YP_779304.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis
YP_779305.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_779306.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_779307.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_779308.1	KEGG: rpc:RPC_0305 hypothetical protein
YP_779309.1	catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis
YP_779310.1	heat shock protein involved in degradation of misfolded proteins
YP_779311.1	heat shock protein involved in degradation of misfolded proteins
YP_779312.1	PFAM: Smr protein/MutS2; KEGG: rpc:RPC_0301 Smr protein/MutS2
YP_779313.1	PFAM: MltA domain protein; 3D domain protein; KEGG: rpc:RPC_0300 MltA
YP_779314.1	PFAM: import inner membrane translocase, subunit Tim44; KEGG: rpc:RPC_0299 import inner membrane translocase, subunit Tim44
YP_779315.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
YP_779316.1	KEGG: rpc:RPC_0297 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease
YP_779317.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
YP_779318.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rpc:RPC_0295 maf protein
YP_779319.1	PFAM: protein of unknown function DUF299; KEGG: rpc:RPC_0294 protein of unknown function DUF299
YP_779320.1	PFAM: conserved hypothetical protein 701; KEGG: rpb:RPB_0394 hypothetical protein
YP_779321.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_779322.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_779323.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_779324.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_779325.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rpc:RPC_0288 cobyrinic acid a,c-diamide synthase
YP_779326.1	TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: rpc:RPC_0287 ParB-like partition proteins
YP_779327.1	required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA
YP_779328.1	KEGG: rpc:RPC_0285 hypothetical protein
YP_779329.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_779330.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_0283 diguanylate cyclase (GGDEF domain)
YP_779331.1	TIGRFAM: Protein of unknown function UPF0001; PFAM: alanine racemase domain protein; KEGG: rpd:RPD_0438 protein of unknown function UPF0001
YP_779332.1	KEGG: rpc:RPC_0281 hypothetical protein
YP_779333.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_0280 two component transcriptional regulator, winged helix family
YP_779334.1	PFAM: cyclic nucleotide-binding; KEGG: rpc:RPC_0279 cyclic nucleotide-binding domain (cNMP-BD) protein
YP_779335.1	TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpc:RPC_0278 exodeoxyribonuclease III (xth)
YP_779336.1	PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: rpc:RPC_0277 outer membrane lipoprotein carrier protein LolA
YP_779337.1	PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rpc:RPC_0276 cell divisionFtsK/SpoIIIE
YP_779338.1	PFAM: aminotransferase, class I and II; KEGG: rpc:RPC_0275 aminotransferase, class I and II
YP_779339.1	PFAM: protein of unknown function DUF86; KEGG: rpc:RPC_0274 protein of unknown function DUF86
YP_779340.1	PFAM: DNA polymerase, beta domain protein region; KEGG: rpc:RPC_0273 DNA polymerase, beta-like region
YP_779341.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rpa:RPA0275 putative ammonium transporter AmtB
YP_779342.1	PFAM: nitrogen regulatory protein P-II; KEGG: rpd:RPD_0449 nitrogen regulatory protein P-II
YP_779343.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rpc:RPC_0270 ammonium transporter
YP_779344.1	PFAM: nitrogen regulatory protein P-II; KEGG: rpd:RPD_0451 nitrogen regulatory protein P-II
YP_779345.1	KEGG: rpc:RPC_0268 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase
YP_779346.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: rpc:RPC_0267 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_779347.1	PFAM: protein of unknown function DUF343; KEGG: rpc:RPC_0266 protein of unknown function DUF343
YP_779348.1	PFAM: peptidase S16, lon domain protein; KEGG: nha:Nham_0082 peptidase S16, lon-like
YP_779349.1	PFAM: Thioredoxin domain; KEGG: rpa:RPA0267 possible thioredoxin
YP_779350.1	PFAM: histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_0263 histidine kinase, HAMP region
YP_779351.1	KEGG: rpc:RPC_0262 putative photosynthesis gene regulator, AppA/PpaA family
YP_779352.1	KEGG: rpc:RPC_0261 hypothetical protein
YP_779353.1	KEGG: rpc:RPC_0260 molecular chaperone, HSP70 class
YP_779354.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: rpc:RPC_0259 RNA binding S1
YP_779355.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpb:RPB_1973 epoxide hydrolase
YP_779356.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_0258 alpha/beta hydrolase fold
YP_779357.1	KEGG: rpc:RPC_0257 hypothetical protein
YP_779358.1	KEGG: rpc:RPC_0256 hypothetical protein
YP_779359.1	KEGG: rpc:RPC_0255 hypothetical protein
YP_779360.1	KEGG: rpb:RPB_4696 hypothetical protein
YP_779361.1	PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: rpc:RPC_0252 ribulose-bisphosphate carboxylase
YP_779362.1	PFAM: protein of unknown function UPF0047; KEGG: rpc:RPC_0251 protein of unknown function UPF0047
YP_779363.1	KEGG: rpc:RPC_4551 SecC-like protein
YP_779364.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_0949 ABC transporter related
YP_779365.1	PFAM: 3'-5' exonuclease; KEGG: rpc:RPC_0419 3'-5' exonuclease
YP_779366.1	KEGG: rpc:RPC_0418 hypothetical protein
YP_779367.1	PFAM: OstA family protein; KEGG: rpc:RPC_0417 OstA-like protein
YP_779368.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_0177 ABC transporter related
YP_779369.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
YP_779370.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rpc:RPC_0414 sigma 54 modulation protein/ribosomal protein S30EA
YP_779371.1	TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: rpc:RPC_0413 PTS IIA-like nitrogen-regulatory protein PtsN
YP_779372.1	KEGG: rpc:RPC_2948 hypothetical protein
YP_779373.1	PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150
YP_779374.1	PFAM: heat shock protein Hsp20; KEGG: rpc:RPC_0409 heat shock protein HSP20
YP_779375.1	part of the UgpABCE glycerol-3-phosphate uptake system
YP_779376.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_0407 binding-protein-dependent transport systems inner membrane component
YP_779377.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_0406 binding-protein-dependent transport systems inner membrane component
YP_779378.1	PFAM: protein of unknown function DUF559; KEGG: rpc:RPC_0405 protein of unknown function DUF559
YP_779379.1	PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_0404 extracellular solute-binding protein, family 1
YP_779380.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rpc:RPC_0403 L-carnitine dehydratase/bile acid-inducible protein F
YP_779381.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpc:RPC_0402 excinuclease ABC, C subunit-like
YP_779382.1	TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_0401 hypothetical protein
YP_779383.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_779384.1	PFAM: protein of unknown function DUF374; KEGG: rpc:RPC_0399 protein of unknown function DUF374
YP_779385.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
YP_779387.1	KEGG: rpc:RPC_0445 hypothetical protein
YP_779388.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_779389.1	TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: rpc:RPC_0396 signal peptide peptidase SppA, 36K type
YP_779390.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_779391.1	KEGG: rpc:RPC_0394 hypothetical protein
YP_779392.1	catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis
YP_779393.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_779394.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_779395.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits
YP_779396.1	KEGG: rpc:RPC_0389 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein
YP_779397.1	PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: vpa:VP1368 hypothetical protein
YP_779398.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rpa:RPA0073 thioredoxin
YP_779399.1	PFAM: UvrD/REP helicase; KEGG: rpc:RPC_0387 UvrD/REP helicase
YP_779400.1	KEGG: rpc:RPC_0386 hypothetical protein
YP_779401.1	PFAM: Nucleotidyl transferase; KEGG: rpd:RPD_0204 nucleotidyl transferase
YP_779402.1	KEGG: rpb:RPB_0626 hypothetical protein
YP_779403.1	PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: rpc:RPC_0383 protein of unknown function UPF0079
YP_779404.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: rpc:RPC_0382 PAS/PAC sensor signal transduction histidine kinase
YP_779405.1	catalyzes the formation of dUMP from dUTP
YP_779406.1	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; in the alphaproteobacteria, this protein contains an N-terminal SbtC-like domain
YP_779407.1	KEGG: ttj:TTHA1533 hypothetical protein
YP_779408.1	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: rpc:RPC_0379 2-polyprenylphenol 6-hydroxylase
YP_779409.1	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone
YP_779410.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_779411.1	KEGG: gvi:gsr4342 virulence-associated protein VapB homolog
YP_779412.1	catalyzes the formation of malonyl-CoA from malonate and CoA
YP_779413.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_0246 short-chain dehydrogenase/reductase SDR
YP_779414.1	consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate
YP_779415.1	PFAM: beta-Ig-H3/fasciclin; KEGG: rpc:RPC_0244 beta-Ig-H3/fasciclin
YP_779416.1	KEGG: rpc:RPC_0243 hypothetical protein
YP_779417.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: oxidoreductase, molybdopterin binding; KEGG: rpb:RPB_0333 twin-arginine translocation pathway signal
YP_779418.1	PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: rpc:RPC_0241 major facilitator superfamily MFS_1
YP_779419.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_779420.1	PFAM: protein of unknown function DUF1568; KEGG: rpb:RPB_1952 protein of unknown function DUF1568
YP_779421.1	KEGG: rpc:RPC_0239 hypothetical protein
YP_779422.1	KEGG: rpd:RPD_0492 hypothetical protein
YP_779423.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_779424.1	PFAM: Uncharacterized protein UPF0114; KEGG: rpc:RPC_0236 uncharacterized protein UPF0114
YP_779425.1	KEGG: rpc:RPC_0337 transcriptional regulator, AraC family; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; SMART: helix-turn-helix- domain containing protein, AraC type
YP_779426.1	KEGG: rpc:RPC_0338 hypothetical protein
YP_779427.1	KEGG: rpa:RPA0343 endonuclease III DNA-(apurinic or apyrimidinic site) lyase; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_779428.1	putative role in sulfur assimilation
YP_779429.1	KEGG: rpc:RPC_0442 hypothetical protein
YP_779430.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_0443 twin-arginine translocation pathway signal
YP_779432.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_779433.1	KEGG: rpc:RPC_0445 hypothetical protein
YP_779434.1	KEGG: rpc:RPC_0446 hypothetical protein
YP_779435.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_779436.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_779437.1	PFAM: ribosomal protein L35; KEGG: nha:Nham_0076 ribosomal protein L35
YP_779438.1	KEGG: rpc:RPC_0450 hypothetical protein
YP_779439.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
YP_779440.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_0340 alpha/beta hydrolase fold
YP_779441.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: rpc:RPC_0440 4Fe-4S ferredoxin, iron-sulfur binding
YP_779442.1	PFAM: Glutathione S-transferase, C-terminal domain; KEGG: rpc:RPC_0439 glutathione S-transferase-like
YP_779443.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_779444.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: rpc:RPC_0437 NAD-dependent epimerase/dehydratase
YP_779445.1	KEGG: rpc:RPC_1154 thioesterase superfamily
YP_779446.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_0060 ErfK/YbiS/YcfS/YnhG
YP_779447.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_0061 methyl-accepting chemotaxis sensory transducer
YP_779448.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpc:RPC_0073 cation diffusion facilitator family transporter
YP_779449.1	PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: rpb:RPB_0327 succinate dehydrogenase, cytochrome b subunit
YP_779450.1	PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: rpb:RPB_0326 succinate dehydrogenase, cytochrome b subunit
YP_779451.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_779453.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
YP_779454.1	PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: rpd:RPD_0477 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_779455.1	KEGG: rpc:RPC_0066 hypothetical protein
YP_779456.1	PFAM: OmpA/MotB domain protein; KEGG: rpc:RPC_0065 OmpA/MotB
YP_779457.1	PFAM: membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG); KEGG: rpc:RPC_0077 membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG)
YP_779458.1	KEGG: rpb:RPB_4688 hypothetical protein
YP_779459.1	PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_0079 protein of unknown function DUF214
YP_779460.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0080 ABC transporter related
YP_779461.1	KEGG: rpc:RPC_0081 protein of unknown function DUF201
YP_779462.1	KEGG: rpa:RPA4805 hypothetical protein
YP_779463.1	KEGG: rpc:RPC_0082 hypothetical protein
YP_779464.1	KEGG: rpc:RPC_0083 hypothetical protein
YP_779465.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpd:RPD_4390 TonB-dependent receptor
YP_779466.1	PFAM: transport system permease protein; KEGG: rpc:RPC_0085 transport system permease protein
YP_779467.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0086 ABC transporter related
YP_779468.1	PFAM: periplasmic binding protein; KEGG: rpc:RPC_0087 periplasmic binding protein
YP_779469.1	PFAM: protein of unknown function DUF938; KEGG: rpc:RPC_0088 protein of unknown function DUF938
YP_779470.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_0089 major facilitator superfamily MFS_1
YP_779471.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpb:RPB_4675 acyl-CoA dehydrogenase-like
YP_779472.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902
YP_779473.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_4383 acyl-CoA dehydrogenase-like
YP_779474.1	SMART: extracellular solute-binding protein, family 3; KEGG: rpa:RPA4797 ABC transporter, amino acid binding protein
YP_779475.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpd:RPD_4381 ErfK/YbiS/YcfS/YnhG
YP_779476.1	KEGG: rpc:RPC_0090 hypothetical protein
YP_779477.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: rpc:RPC_0091 cytochrome d ubiquinol oxidase, subunit II
YP_779478.1	PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: rpc:RPC_0092 cytochrome bd ubiquinol oxidase, subunit I
YP_779479.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_779480.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpa:RPA4791 two-component transcriptional regulator, winged helix family
YP_779481.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_0095 response regulator receiver sensor signal transduction histidine kinase
YP_779482.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_0096 periplasmic sensor signal transduction histidine kinase
YP_779483.1	PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_0097 extracellular solute-binding protein, family 1
YP_779485.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_4371 twin-arginine translocation pathway signal
YP_779486.1	PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: rpc:RPC_0346 pirin-like
YP_779487.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_779488.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_779489.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_779490.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpd:RPD_0585 protein of unknown function DUF6, transmembrane
YP_779492.1	PFAM: formate/nitrite transporter; KEGG: rpc:RPC_4565 formate/nitrite transporter
YP_779493.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_0155 GCN5-related N-acetyltransferase
YP_779494.1	involved in the peptidyltransferase reaction during translation
YP_779495.1	PFAM: ribosomal protein L21; KEGG: rpb:RPB_0246 ribosomal protein L21
YP_779496.1	KEGG: rpc:RPC_0152 hypothetical protein
YP_779497.1	PFAM: phage integrase family protein; KEGG: ret:RHE_CH00241 putative recombinase protein, phage integrase family
YP_779499.1	PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: xcb:XC_0536 helicase
YP_779500.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: eba:ebA2416 adenine specific DNA methylase MOD
YP_779501.1	PFAM: type III restriction enzyme, res subunit; KEGG: tbd:Tbd_0937 hypothetical protein
YP_779502.1	KEGG: nha:Nham_0139 hypothetical protein
YP_779507.1	KEGG: rpb:RPB_3050 hypothetical protein
YP_779508.1	KEGG: reu:Reut_A0008 HNH endonuclease
YP_779510.1	TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: sth:STH2337 ribose 5-phosphate isomerase
YP_779511.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: eci:UTI89_C4681 D-allulose-6-phosphate 3-epimerase
YP_779512.1	PFAM: beta-lactamase; KEGG: dge:Dgeo_0953 beta-lactamase
YP_779517.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_779518.1	PFAM: AMP-dependent synthetase and ligase; KEGG: sme:SMb20650 putative long-chain fatty-acid-CoA ligase protein
YP_779519.1	KEGG: sme:SMb20651 hypothetical protein
YP_779520.1	TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: sme:SMb20652 putative asparagine synthetase protein
YP_779521.1	KEGG: sme:SMb21515 hypothetical protein
YP_779522.1	KEGG: rpa:RPA0677 hypothetical protein
YP_779523.1	cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA
YP_779524.1	PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA0675 possible hydrolase (alpha/beta hydrolase superfamily)
YP_779525.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpa:RPA0674 possible alcohol dehydrogenase class III family
YP_779526.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: rpd:RPD_1522 cyclic nucleotide-binding
YP_779527.1	PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rpd:RPD_1523 molybdopterin dehydrogenase, FAD-binding
YP_779528.1	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpc:RPC_1014 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding
YP_779529.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rpd:RPD_1525 (2Fe-2S)-binding
YP_779530.1	TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: rpc:RPC_1016 benzoate-CoA ligase family
YP_779531.1	TIGRFAM:Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_1017 twin-arginine translocation pathway signal
YP_779532.1	PFAM: inner-membrane translocator; KEGG: rpa:RPA0667 putative membrane spanning subunit of ABC transporter
YP_779533.1	PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1019 ABC transporter related
YP_779534.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1020 ABC transporter related
YP_779535.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpd:RPD_1527 GCN5-related N-acetyltransferase
YP_779536.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_1022 GCN5-related N-acetyltransferase
YP_779537.1	TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Helix-turn-helix, type 11 domain protein; KEGG: rpc:RPC_1023 transcriptional regulator, BadM/Rrf2 family
YP_779538.1	PFAM: Rubrerythrin; KEGG: rpd:RPD_1530 rubrerythrin
YP_779539.1	TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: rpd:RPD_1531 pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase, beta subunit
YP_779540.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: rpd:RPD_1532 pyruvate flavodoxin/ferredoxin oxidoreductase-like
YP_779541.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpa:RPA0662 ferredoxin
YP_779542.1	TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: rpc:RPC_1025 benzoate-CoA ligase family
YP_779543.1	TIGRFAM: putative CoA-substrate-specific enzyme activase; benzoyl-CoA reductase, subunit D; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: rpc:RPC_1026 benzoyl-CoA reductase, subunit D
YP_779544.1	TIGRFAM: putative CoA-substrate-specific enzyme activase; benzoyl-CoA reductase, subunit A; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: rpc:RPC_1027 benzoyl-CoA reductase, subunit A
YP_779545.1	TIGRFAM: benzoyl-CoA reductase, subunit B; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: rpd:RPD_1537 benzoyl-CoA reductase, subunit B
YP_779546.1	TIGRFAM: benzoyl-CoA reductase, subunit C; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: rpc:RPC_1029 benzoyl-CoA reductase, subunit C
YP_779547.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_1030 alcohol dehydrogenase, zinc-binding
YP_779548.1	PFAM: regulatory protein, MarR; KEGG: rpc:RPC_1031 transcriptional regulator, MarR family
YP_779549.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpc:RPC_1032 short-chain dehydrogenase/reductase SDR
YP_779550.1	TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_1033 naphthoate synthase
YP_779551.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpc:RPC_1034 acyl-CoA dehydrogenase-like
YP_779552.1	AliA; in Rhodopseudomonas palustris, this enzyme was found to act on 3-chlorobenzoate and allows the organism to grow on this substrate
YP_779553.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_1036 enoyl-CoA hydratase/isomerase
YP_779554.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: cya:CYA_0261 hypothetical protein
YP_779555.1	PFAM: protein of unknown function DUF201; KEGG: ava:Ava_0168 hypothetical protein
YP_779556.1	PFAM: von Willebrand factor, type A; KEGG: rpa:RPA1458 dinitrification protein NorD
YP_779557.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902
YP_779558.1	PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: rpa:RPA1457 regulatory protein NorQ, probable ATPase
YP_779559.1	PFAM: cytochrome c oxidase, subunit I; KEGG: rpa:RPA1456 nitric-oxide reductase subunit B
YP_779560.1	KEGG: bja:blr3214 nitric oxide reductase subunit C
YP_779561.1	KEGG: rpa:RPA1454 hypothetical protein
YP_779562.1	PFAM: cytochrome c oxidase, subunit III; KEGG: bja:blr3212 nitric oxide reductase subunit E
YP_779563.1	KEGG: rpa:RPA2067 hypothetical protein
YP_779564.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpb:RPB_4447 antenna complex, alpha/beta subunit
YP_779565.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_3789 antenna complex, alpha/beta subunit
YP_779566.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpb:RPB_4447 antenna complex, alpha/beta subunit
YP_779567.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpa:RPA2654 light harvesting protein B-800-850, beta chain A (antenna pigment protein, beta chain A) (LH II-A beta)
YP_779568.1	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: rpa:RPA3014 two-component transcriptional regulator, LuxR family
YP_779569.1	PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Phytochrome, central region domain protein; PAS fold-2 domain protein; KEGG: rpb:RPB_4450 multi-sensor signal transduction histidine kinase
YP_779570.1	PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Phytochrome, central region domain protein; PAS fold-2 domain protein; KEGG: rpb:RPB_4451 multi-sensor signal transduction histidine kinase
YP_779571.1	PFAM: response regulator receiver; KEGG: rpb:RPB_4452 response regulator receiver domain protein
YP_779572.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: rpd:RPD_2405 ATP-binding region, ATPase-like
YP_779573.1	biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate
YP_779574.1	catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate
YP_779575.1	PFAM: putative RNA methylase; methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mth:MTH1329 methyltransferase related protein
YP_779576.1	PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpa:RPA0679 hypothetical protein
YP_779577.1	KEGG: rpc:RPC_2253 AtsE
YP_779579.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpb:RPB_0686 signal transduction histidine kinase, nitrogen specific, NtrB
YP_779580.1	in Escherichia coli transcription of this gene is enhanced by polyamines
YP_779581.1	TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: rpb:RPB_0684 ribonuclease P protein component
YP_779582.1	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria
YP_779583.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_779584.1	PFAM: protein of unknown function DUF423; KEGG: rpc:RPC_0815 protein of unknown function DUF423
YP_779585.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_779586.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_0813 hypothetical protein
YP_779587.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpa:RPA0627 putative haloacid dehalogenase superfamily hydrolase
YP_779588.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: bja:blr8111 hypothetical protein
YP_779589.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_779590.1	PFAM: protein of unknown function DUF805; KEGG: rpc:RPC_0810 protein of unknown function DUF805
YP_779591.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_779592.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_779593.1	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth
YP_779594.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_779595.1	PFAM: protein of unknown function DUF195; KEGG: rpc:RPC_0802 protein of unknown function DUF195
YP_779596.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpd:RPD_4335 cyclopropane-fatty-acyl-phospholipid synthase
YP_779597.1	PFAM: protein of unknown function DUF1295; KEGG: rpd:RPD_4336 protein of unknown function DUF1295
YP_779598.1	KEGG: rpc:RPC_0801 hypothetical protein
YP_779599.1	PFAM: OmpA/MotB domain protein; KEGG: rpc:RPC_0800 OmpA/MotB
YP_779600.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_0799 GCN5-related N-acetyltransferase
YP_779601.1	KEGG: rpc:RPC_0798 hypothetical protein
YP_779602.1	KEGG: rpc:RPC_0797 ABC transporter, ATP-binding/permease protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_779603.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_779604.1	PFAM: protein of unknown function DUF1465; KEGG: rpc:RPC_0792 protein of unknown function DUF1465
YP_779605.1	PFAM: protein of unknown function DUF1192; KEGG: rpc:RPC_0791 protein of unknown function DUF1192
YP_779606.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpa:RPA0915 putative NADPH quinone oxidoreductase
YP_779607.1	KEGG: rpc:RPC_0789 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_779608.1	PFAM: transcriptional regulator PadR family protein; KEGG: bja:bll1156 transcriptional regulatory protein
YP_779609.1	KEGG: rpb:RPB_4607 hypothetical protein
YP_779610.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpc:RPC_0737 acyl-CoA dehydrogenase-like
YP_779611.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_779612.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rpb:RPB_4604 3-hydroxyacyl-CoA dehydrogenase
YP_779613.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rpa:RPA0820 putative glutathionine S-transferase
YP_779614.1	PFAM: regulatory protein, MarR; KEGG: rpc:RPC_0733 transcriptional regulator, MarR family
YP_779615.1	TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase, GCS2; KEGG: rpc:RPC_0732 glutamate--cysteine ligase
YP_779616.1	KEGG: rpc:RPC_0731 apple
YP_779617.1	PFAM: Integrase, catalytic region; KEGG: sme:SMb20905 putative transposase protein
YP_779618.1	KEGG: rfr:Rfer_1821 transcriptional regulator, XRE family
YP_779619.1	KEGG: rpc:RPC_0759 hypothetical protein
YP_779620.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_779621.1	PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rpc:RPC_0761 glutamate synthase (ferredoxin)
YP_779622.1	KEGG: rpc:RPC_0762 hypothetical protein
YP_779623.1	PFAM: heat shock protein Hsp20; KEGG: rpb:RPB_4533 heat shock protein HSP20
YP_779624.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_0764 alpha/beta hydrolase fold
YP_779625.1	TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bja:blr1499 UTP--glucose-1-phosphate uridylyltransferase
YP_779626.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_0766 diguanylate cyclase (GGDEF domain)
YP_779627.1	KEGG: rpc:RPC_0767 hypothetical protein
YP_779628.1	KEGG: nha:Nham_2499 ISGsu3, transposase
YP_779629.1	KEGG: mlo:mll9642 hypothetical protein
YP_779630.1	KEGG: nha:Nham_3654 transposase, IS4
YP_779631.1	KEGG: rpd:RPD_0866 hypothetical protein
YP_779632.1	KEGG: rpc:RPC_0768 hypothetical protein
YP_779633.1	KEGG: rpc:RPC_0769 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_779634.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpd:RPD_0083 major facilitator superfamily MFS_1
YP_779635.1	KEGG: rpc:RPC_0771 hypothetical protein
YP_779636.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: rpb:RPB_1983 filamentation induced by cAMP protein Fic
YP_779638.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_0775 lytic murein transglycosylase
YP_779639.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rpc:RPC_0776 lysine exporter protein (LysE/YggA)
YP_779640.1	PFAM: protein of unknown function DUF81; KEGG: rpb:RPB_4519 protein of unknown function DUF81
YP_779641.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpd:RPD_4360 glyoxalase/bleomycin resistance protein/dioxygenase
YP_779642.1	PFAM: regulatory protein, TetR; KEGG: rpd:RPD_4359 regulatory protein, TetR
YP_779643.1	TIGRFAM: histidinol-phosphate phosphatase, putative; PFAM: inositol monophosphatase; KEGG: rpd:RPD_4358 histidinol-phosphate phosphatase, putative, inositol monophosphatase
YP_779644.1	PFAM: N-formylglutamate amidohydrolase; KEGG: rpc:RPC_0780 N-formylglutamate amidohydrolase
YP_779645.1	PFAM: response regulator receiver; KEGG: rpc:RPC_0781 response regulator receiver domain protein (CheY-like)
YP_779646.1	KEGG: rpc:RPC_0782 hypothetical protein
YP_779647.1	stationary phase protein that binds TrpR repressor
YP_779648.1	PFAM: Pirin domain protein domain protein; KEGG: rpd:RPD_4351 pirin-like
YP_779649.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpa:RPA0911 transcriptional regulator, LysR family
YP_779650.1	KEGG: rpc:RPC_0787 hypothetical protein
YP_779651.1	PFAM: protein of unknown function DUF179; KEGG: rpc:RPC_0788 protein of unknown function DUF179
YP_779652.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpc:RPC_0738 Sel1
YP_779653.1	PFAM: protein of unknown function DUF81; KEGG: rpc:RPC_0741 protein of unknown function DUF81
YP_779654.1	TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_0742 hypothetical protein
YP_779655.1	PFAM: carbonic anhydrase; KEGG: rpc:RPC_0758 carbonate dehydratase
YP_779656.1	PFAM: peptidase S24, S26A and S26B; KEGG: rpc:RPC_0757 putative phage repressor
YP_779657.1	PFAM: protein of unknown function DUF952; KEGG: rpc:RPC_0756 protein of unknown function DUF952
YP_779658.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_779659.1	PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_0754 beta-lactamase-like
YP_779660.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rpd:RPD_0791 MATE efflux family protein
YP_779661.1	KEGG: rpc:RPC_0752 hypothetical protein
YP_779662.1	catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA
YP_779663.1	KEGG: rpc:RPC_0750 putative mRNA 3-end processing factor
YP_779664.1	PFAM: Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_0749 tetratricopeptide TPR_2
YP_779665.1	PFAM: porin; KEGG: rpc:RPC_0748 putative outer membrane protein
YP_779666.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_0796 extracellular ligand-binding receptor
YP_779667.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; KEGG: rpc:RPC_0747 DEAD/DEAH box helicase-like
YP_779668.1	KEGG: rpc:RPC_0746 hypothetical protein
YP_779669.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpa:RPA0809 transcriptional regulator, LysR family
YP_779670.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_0744 protein of unknown function DUF6, transmembrane
YP_779671.1	KEGG: rpc:RPC_0743 hypothetical protein
YP_779672.1	KEGG: rpd:RPD_1001 hypothetical protein
YP_779673.1	class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine
YP_779674.1	PFAM: extracellular solute-binding protein, family 3; KEGG: rpc:RPC_0729 extracellular solute-binding protein, family 3
YP_779675.1	PFAM: glycosyl transferase, family 2; KEGG: rpb:RPB_0886 glycosyl transferases
YP_779676.1	PFAM: electron transport protein SCO1/SenC; KEGG: rpc:RPC_0721 electron transport protein SCO1/SenC
YP_779677.1	KEGG: rpc:RPC_0720 hypothetical protein
YP_779678.1	KEGG: rpc:RPC_0718 hypothetical protein
YP_779679.1	catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_779680.1	KEGG: nha:Nham_0216 hypothetical protein
YP_779681.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpb:RPB_0879 transcriptional regulator, LysR family
YP_779682.1	PFAM: protein of unknown function DUF453; KEGG: rpb:RPB_0878 protein of unknown function DUF453
YP_779683.1	PFAM: amidohydrolase 2; KEGG: rpb:RPB_0877 amidohydrolase 2
YP_779684.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: rpb:RPB_0876 dimethylmenaquinone methyltransferase
YP_779685.1	KEGG: rpa:RPA4699 possible dehydrogenase
YP_779686.1	PFAM: amidohydrolase 2; KEGG: rpb:RPB_0874 amidohydrolase 2
YP_779687.1	extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway
YP_779688.1	extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway
YP_779689.1	PFAM: oxidoreductase domain protein; KEGG: rpa:RPA4703 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
YP_779690.1	KEGG: rpc:RPC_0717 hypothetical protein
YP_779691.1	PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: rpc:RPC_0716 phosphoribosyl-ATP pyrophosphohydrolase
YP_779692.1	KEGG: rpa:RPA4706 DedA family
YP_779693.1	KEGG: rpc:RPC_0714 hypothetical protein
YP_779694.1	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: rpd:RPD_0976 2-nitropropane dioxygenase, NPD
YP_779695.1	KEGG: rpc:RPC_0712 hypothetical protein
YP_779696.1	KEGG: rpc:RPC_0711 hypothetical protein
YP_779697.1	KEGG: rpc:RPC_0710 hypothetical protein
YP_779698.1	KEGG: rpc:RPC_0709 hypothetical protein
YP_779699.1	KEGG: rpc:RPC_0708 molybdate ABC transporter, ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase
YP_779700.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_0707 molybdate ABC transporter, permease protein
YP_779701.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rpa:RPA4717 molybdate transport system substrate-binding protein
YP_779702.1	TIGRFAM: molybdate transport repressor, ModE; Molybdenum-pterin binding; PFAM: regulatory protein, LysR; TOBE domain protein; KEGG: rpc:RPC_0705 transcriptional regulator, ModE family
YP_779703.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rpc:RPC_0704 pyruvate flavodoxin/ferredoxin oxidoreductase-like
YP_779704.1	undetermined function
YP_779705.1	PFAM: Collagen triple helix repeat; KEGG: rpb:RPB_1937 collagen triple helix repeat
YP_779706.1	PFAM: PfkB domain protein; KEGG: rpc:RPC_0700 PfkB
YP_779707.1	catalyzes the formation of L-tryptophan from indole and L-serine
YP_779708.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bja:blr6465 putative steroid monooxygenase
YP_779709.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook
YP_779710.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rpc:RPC_0874 flagellar hook-associated protein
YP_779711.1	KEGG: rpc:RPC_0873 hypothetical protein
YP_779712.1	KEGG: rpc:RPC_0872 hypothetical protein
YP_779713.1	the hook connects flagellar basal body to the flagellar filament
YP_779714.1	PFAM: flagellar hook capping protein; KEGG: rpc:RPC_0870 flagellar hook capping protein
YP_779715.1	KEGG: rpb:RPB_0763 hypothetical protein
YP_779716.1	KEGG: rpc:RPC_0868 flagellar protein FliS
YP_779717.1	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: rpc:RPC_0867 flagellar hook-associated 2-like
YP_779718.1	PFAM: flagellin domain protein; KEGG: rpc:RPC_0866 flagellin-like
YP_779719.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_779721.1	KEGG: rpc:RPC_0863 hypothetical protein
YP_779722.1	PFAM: Disulphide bond formation protein DsbB; KEGG: rpc:RPC_0627 disulphide bond formation protein DsbB
YP_779723.1	KEGG: rpc:RPC_0625 hypothetical protein
YP_779724.1	PFAM: LrgA family protein; KEGG: rpc:RPC_0624 LrgA
YP_779725.1	PFAM: LrgB family protein; KEGG: rpa:RPA0545 hypothetical protein
YP_779726.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: DSBA oxidoreductase; KEGG: rpc:RPC_0622 twin-arginine translocation pathway signal
YP_779727.1	KEGG: rpc:RPC_0621 hypothetical protein
YP_779728.1	KEGG: rpd:RPD_0334 hypothetical protein
YP_779729.1	PFAM: protein of unknown function UPF0118; KEGG: rpc:RPC_2083 protein of unknown function UPF0118
YP_779730.1	TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: rpb:RPB_0487 anti-sigm factor, ChrR
YP_779731.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
YP_779732.1	PFAM: GTP cyclohydrolase I; KEGG: mag:amb4223 GTP cyclohydrolase I
YP_779733.1	KEGG: rpc:RPC_1052 citrate transporter
YP_779734.1	KEGG: rru:Rru_A1257 hypothetical protein
YP_779735.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rpc:RPC_0613 HNH endonuclease
YP_779736.1	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose
YP_779737.1	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate
YP_779739.1	PFAM: CBS domain containing protein; KEGG: rpc:RPC_0610 putative signal-transduction protein with CBS domains
YP_779740.1	PFAM: acetyl-CoA hydrolase/transferase; KEGG: rpd:RPD_0322 acetyl-CoA hydrolase
YP_779741.1	KEGG: rpc:RPC_2939 alpha/beta hydrolase fold
YP_779742.1	PFAM: glycosyl transferase, group 1; KEGG: atc:AGR_L_3095 hypothetical protein
YP_779743.1	PFAM: lipopolysaccharide biosynthesis; KEGG: rru:Rru_A1490 protein-tyrosine kinase
YP_779744.1	PFAM: glycosyl transferase, group 1; KEGG: ana:alr3699 similar to glycosyltransferase
YP_779745.1	PFAM: polysaccharide deacetylase; KEGG: bja:bll1083 hypothetical protein
YP_779746.1	PFAM: glycosyl transferase, group 1; KEGG: ava:Ava_1365 glycosyl transferase, group 1
YP_779747.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cte:CT0759 hypothetical protein
YP_779748.1	PFAM: polysaccharide biosynthesis protein; KEGG: mlo:mll5270 probable succinoglycan transport protein
YP_779749.1	PFAM: glycosyl transferase, group 1; KEGG: cvi:CV0817 probable glycosyltransferase
YP_779751.1	KEGG: bja:blr7300 hypothetical protein
YP_779752.1	KEGG: rpb:RPB_0453 hypothetical protein
YP_779753.1	KEGG: rpc:RPC_0606 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_779754.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_779755.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_779756.1	PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: rpc:RPC_0598 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_779757.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpd:RPD_0367 response regulator receiver
YP_779758.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_0596 periplasmic sensor signal transduction histidine kinase
YP_779759.1	KEGG: rpc:RPC_0595 HPr kinase
YP_779760.1	PFAM: PTS system fructose subfamily IIA component; KEGG: rpd:RPD_0370 PTS system fructose subfamily IIA component
YP_779761.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: rpc:RPC_0593 HPrNtr
YP_779762.1	KEGG: rpc:RPC_0592 hypothetical protein
YP_779763.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_779765.1	KEGG: rpc:RPC_0587 hypothetical protein
YP_779766.1	PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA0348 possible hydrolase
YP_779767.1	TIGRFAM: cytochrome C family protein; KEGG: rpc:RPC_2960 cytochrome
YP_779768.1	KEGG: rpc:RPC_2959 putative outer membrane protein precursor
YP_779769.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_2958 twin-arginine translocation pathway signal
YP_779770.1	PFAM: porin; KEGG: rpa:RPA2815 possible outer membrane protein
YP_779771.1	PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpd:RPD_3218 DEAD/DEAH box helicase-like
YP_779772.1	KEGG: rpc:RPC_0877 ADP-ribosyl-(dinitrogen reductase) hydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; PFAM: ADP-ribosylation/Crystallin J1
YP_779773.1	PFAM: Dinitrogenase reductase ADP-ribosyltransferase; KEGG: rpc:RPC_0878 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase
YP_779774.1	PFAM: glutamine amidotransferase class-I; KEGG: rpc:RPC_0879 glutamine amidotransferase class-I
YP_779775.1	KEGG: bja:bll6198 hypothetical protein
YP_779776.1	KEGG: bja:blr6203 hypothetical protein
YP_779777.1	KEGG: bja:bsl6204 hypothetical protein
YP_779778.1	KEGG: bja:bll6205 hypothetical protein
YP_779779.1	KEGG: rpc:RPC_0883 coenzyme PQQ biosynthesis protein E; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_779780.1	PFAM: coenzyme PQQ synthesis D; KEGG: rpd:RPD_2032 coenzyme PQQ synthesis D
YP_779781.1	Required in the synthesis of PPQ, but its exact function is unknown
YP_779782.1	possibly involved in transport of pyrroloquinoline quinone transport
YP_779783.1	activates fatty acids by binding to coenzyme A
YP_779784.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpa:RPA2193 putative ABC transporter, perplasmic binding protein, branched chain amino acids
YP_779785.1	KEGG: bja:blr6197 hypothetical protein
YP_779786.1	PFAM: beta-lactamase domain protein; KEGG: bja:blr6196 hypothetical protein
YP_779787.1	PFAM: Pyrrolo-quinoline quinone; KEGG: bja:blr6213 methanol dehydrogenase large subunit-like protein
YP_779788.1	KEGG: bja:blr6214 putative cytochrome c protein
YP_779789.1	SMART: extracellular solute-binding protein, family 3; KEGG: bja:bll6195 putative methanol oxidation protein
YP_779790.1	KEGG: bja:bll6194 hypothetical protein
YP_779794.1	PFAM: amine oxidase; KEGG: rpc:RPC_4728 FAD dependent oxidoreductase
YP_779795.1	KEGG: rpc:RPC_4727 hypothetical protein
YP_779796.1	KEGG: mag:amb2703 hypothetical protein
YP_779797.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia have multiple copies of the groEL gene which are active under different environmental conditions; the S. meliloti protein in this cluster is not associated with a groES gene
YP_779798.1	PFAM: chaperonin Cpn10; KEGG: rpc:RPC_4725 chaperonin Cpn10
YP_779799.1	KEGG: rpc:RPC_4724 hypothetical protein
YP_779800.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpb:RPB_1839 major facilitator superfamily MFS_1
YP_779801.1	KEGG: rpc:RPC_4723 hypothetical protein
YP_779802.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_4722 ErfK/YbiS/YcfS/YnhG
YP_779803.1	KEGG: rpc:RPC_0352 hypothetical protein
YP_779804.1	KEGG: rpc:RPC_4721 putative periplasmic ligand-binding sensor protein
YP_779805.1	PFAM: YdjC family protein; KEGG: rpd:RPD_4120 YdjC-like protein
YP_779806.1	PFAM: glycosyl transferase, family 2; KEGG: rpc:RPC_4719 glycosyl transferase, family 2
YP_779807.1	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors
YP_779808.1	May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
YP_779809.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_779810.1	KEGG: rpc:RPC_4712 hypothetical protein
YP_779811.1	UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin
YP_779812.1	KEGG: rpa:RPA1154 hypothetical protein
YP_779813.1	PFAM: peptidase U62, modulator of DNA gyrase; KEGG: rpc:RPC_4708 peptidase U62, modulator of DNA gyrase
YP_779814.1	PFAM: inositol monophosphatase; KEGG: rpc:RPC_4707 inositol monophosphatase
YP_779815.1	KEGG: rpc:RPC_4706 hypothetical protein
YP_779816.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: rpc:RPC_4705 three-deoxy-D-manno-octulosonic-acid transferase-like
YP_779817.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_779818.1	KEGG: rpc:RPC_4703 hypothetical protein
YP_779819.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rfr:Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
YP_779820.1	SMART: extracellular solute-binding protein, family 3; KEGG: gsu:GSU1528 ABC transporter, periplasmic substrate-binding protein
YP_779821.1	KEGG: sme:SMc01718 hypothetical protein
YP_779822.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: ade:Adeh_1432 1-aminocyclopropane-1-carboxylate deaminase
YP_779823.1	PFAM: SbmABacA family protein; ABC transporter domain protein; KEGG: rpc:RPC_4701 ABC transporter-like
YP_779824.1	KEGG: rpc:RPC_4700 hypothetical protein
YP_779825.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpc:RPC_4699 acyl-CoA dehydrogenase-like
YP_779826.1	KEGG: rpc:RPC_4698 putative cytochrome c552 precursor
YP_779827.1	KEGG: rpd:RPD_0769 hypothetical protein
YP_779828.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpc:RPC_4696 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
YP_779829.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_4695 short-chain dehydrogenase/reductase SDR
YP_779830.1	KEGG: rpc:RPC_4694 putative adenylate/guanylate cyclase
YP_779831.1	PFAM: cytochrome P450; KEGG: rpc:RPC_4693 cytochrome P450
YP_779832.1	putative metalloprotease
YP_779833.1	PFAM: aminotransferase, class V; KEGG: rpc:RPC_4689 aminotransferase, class V
YP_779834.1	PFAM: nuclease (SNase domain protein); KEGG: rpc:RPC_4688 nuclease (SNase-like)
YP_779835.1	KEGG: rpc:RPC_4687 hypothetical protein
YP_779836.1	PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rpc:RPC_4686 peptidase C14, caspase catalytic subunit P20
YP_779837.1	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space
YP_779838.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_779839.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rpc:RPC_4685 secretion protein HlyD
YP_779840.1	PFAM: AsmA family protein; KEGG: rpd:RPD_1004 AsmA
YP_779841.1	PFAM: acriflavin resistance protein; KEGG: rpc:RPC_0885 acriflavin resistance protein
YP_779842.1	KEGG: rpc:RPC_0886 secretion protein HlyD
YP_779843.1	PFAM: OmpA/MotB domain protein; KEGG: rpb:RPB_0896 OmpA/MotB
YP_779844.1	PFAM: TPR repeat-containing protein; peptidase C14, caspase catalytic subunit p20; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpb:RPB_0897 peptidase C14, caspase catalytic subunit P20
YP_779845.1	PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: rpc:RPC_0888 monooxygenase, FAD-binding
YP_779846.1	KEGG: rpb:RPB_0904 hypothetical protein
YP_779847.1	PFAM: beta-lactamase domain protein; KEGG: rpa:RPA4673 putative beta lactamase precursor
YP_779848.1	An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine
YP_779849.1	KEGG: rpb:RPB_0909 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase
YP_779850.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_779851.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_779852.1	PFAM: EAL domain protein; KEGG: rpc:RPC_0895 diguanylate phosphodiesterase (EAL domain)
YP_779853.1	TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_0896 HAD-superfamily hydrolase, subfamily IIA
YP_779854.1	KEGG: sco:SCO2383 secreted protein
YP_779856.1	PFAM: response regulator receiver; KEGG: rpc:RPC_0897 response regulator receiver domain protein (CheY-like)
YP_779857.1	PFAM: protein of unknown function DUF519; KEGG: rpc:RPC_0898 protein of unknown function DUF519
YP_779858.1	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rpc:RPC_0899 cold-shock DNA-binding domain protein
YP_779859.1	KEGG: rpc:RPC_0900 putative outer-membrane immunogenic protein precursor
YP_779860.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_779861.1	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpc:RPC_0902 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_779862.1	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: rpb:RPB_1175 molybdopterin converting factor, subunit 1
YP_779863.1	PFAM: molybdopterin biosynthesis MoaE; KEGG: rpd:RPD_1278 molybdopterin biosynthesis MoaE
YP_779864.1	involved in methylation of ribosomal protein L3
YP_779865.1	TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: rpc:RPC_0906 conserved hypothetical protein 95
YP_779866.1	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rpc:RPC_0907 pseudouridine synthase, Rsu
YP_779867.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: rpa:RPA1164 possible cytidine and deoxycytidylate deaminase
YP_779868.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rpc:RPC_0909 isoprenylcysteine carboxyl methyltransferase
YP_779869.1	PFAM: transcriptional regulator PadR family protein; KEGG: rpc:RPC_3227 transcriptional regulator, PadR-like family
YP_779870.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rpc:RPC_0910 L-carnitine dehydratase/bile acid-inducible protein F
YP_779871.1	PFAM: 4-oxalocrotonate tautomerase; KEGG: rpd:RPD_1290 4-oxalocrotonate tautomerase
YP_779872.1	KEGG: bja:bll7455 hypothetical protein
YP_779873.1	KEGG: rpc:RPC_0912 hypothetical protein
YP_779874.1	TIGRFAM: conserved hypothetical membrane protein; KEGG: rpc:RPC_0914 double-transmembrane region-like
YP_779875.1	KEGG: rpc:RPC_0915 DUF58
YP_779876.1	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: rpc:RPC_0916 ATPase associated with various cellular activities, AAA_3
YP_779877.1	PFAM: protein of unknown function DUF1285; KEGG: rpb:RPB_1193 protein of unknown function DUF1285
YP_779878.1	PFAM: NUDIX hydrolase; KEGG: rpc:RPC_0918 NUDIX hydrolase
YP_779879.1	KEGG: rpc:RPC_0919 hypothetical protein
YP_779880.1	PFAM: Polynucleotide adenylyltransferase region; KEGG: rpc:RPC_0920 polynucleotide adenylyltransferase region
YP_779881.1	KEGG: rpc:RPC_0921 hypothetical protein
YP_779882.1	KEGG: nwi:Nwi_2619 hypothetical protein
YP_779883.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rpc:RPC_0923 tRNA/rRNA methyltransferase (SpoU)
YP_779884.1	TIGRFAM: Twin-arginine translocation pathway signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rpc:RPC_0924 ubiquinol-cytochrome c reductase, iron-sulfur subunit
YP_779885.1	PFAM: cytochrome c1; Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; KEGG: rpc:RPC_0925 cytochrome c1
YP_779886.1	PFAM: dienelactone hydrolase; KEGG: rpc:RPC_0926 carboxymethylenebutenolidase
YP_779887.1	KEGG: rpd:RPD_1305 hypothetical protein
YP_779888.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rpc:RPC_0929 NADH dehydrogenase (quinone)
YP_779889.1	KEGG: rpc:RPC_0930 respiratory-chain NADH dehydrogenase, subunit 1
YP_779890.1	KEGG: rpc:RPC_0931 hypothetical protein
YP_779891.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rpc:RPC_0932 NADH dehydrogenase (quinone)
YP_779892.1	PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: rpc:RPC_0933 NADH-ubiquinone oxidoreductase, chain 49kDa
YP_779893.1	PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: bja:blr6344 probable hydrogenase-3 subunit G
YP_779894.1	TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: rpd:RPD_3849 outer membrane autotransporter barrel
YP_779895.1	KEGG: rpc:RPC_0935 hypothetical protein
YP_779896.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpc:RPC_0936 MotA/TolQ/ExbB proton channel
YP_779897.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpc:RPC_0937 biopolymer transport protein ExbD/TolR
YP_779898.1	TIGRFAM: TonB family protein; KEGG: rpc:RPC_0938 TonB-like
YP_779899.1	KEGG: bja:bll7951 hypothetical protein
YP_779900.1	PFAM: protein of unknown function DUF1153; KEGG: nha:Nham_0692 protein of unknown function DUF1153
YP_779901.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_779902.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_779903.1	binds to and inhibits the function of flagella specific ATPase FliI
YP_779904.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_779905.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_0945 two component, sigma54 specific, transcriptional regulator, fis family
YP_779906.1	KEGG: rpc:RPC_0946 hypothetical protein
YP_779907.1	KEGG: rpc:RPC_0947 hypothetical protein
YP_779909.1	KEGG: rpa:RPA1271 hypothetical protein
YP_779910.1	PFAM: transglutaminase domain protein; KEGG: rpc:RPC_0949 transglutaminase-like
YP_779911.1	KEGG: rpc:RPC_0955 exodeoxyribonuclease V
YP_779912.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_0956 methyltransferase type 12
YP_779913.1	PFAM: Ferritin, Dps family protein; KEGG: rpa:RPA1274 possible Dps protein family starvation-inducible DNA-binding protein
YP_779914.1	KEGG: rpc:RPC_0958 uncharacterized protein containing double-stranded beta helix domain-like
YP_779915.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_779916.1	PFAM: GatB/Yqey domain protein; KEGG: rpa:RPA1278 GatB/YqeY
YP_779917.1	KEGG: rpc:RPC_0698 phenylacetate--CoA ligase
YP_779918.1	PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: rpc:RPC_0697 pyruvate ferredoxin/flavodoxin oxidoreductase
YP_779919.1	catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin
YP_779920.1	PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rpc:RPC_0695 pyruvate flavodoxin/ferredoxin oxidoreductase-like
YP_779921.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: rpc:RPC_0694 pyruvate ferredoxin/flavodoxin oxidoreductase
YP_779922.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: rpc:RPC_0693 thiamine pyrophosphate enzyme-like TPP-binding
YP_779923.1	TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain; KEGG: rpc:RPC_0692 phenylacetic acid degradation operon negative regulatory protein PaaX
YP_779924.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA
YP_779925.1	with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation
YP_779926.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: rpc:RPC_0689 phenylacetate-CoA oxygenase, PaaI subunit
YP_779927.1	TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: rpd:RPD_1827 phenylacetate-CoA oxygenase, PaaJ subunit
YP_779928.1	TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rpc:RPC_0687 phenylacetate-CoA oxygenase/reductase, PaaK subunit
YP_779929.1	PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: rpc:RPC_0686 ethyl tert-butyl ether degradation EthD
YP_779930.1	catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA
YP_779931.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_0684 transcriptional regulator, TetR family
YP_779932.1	TIGRFAM: phenylacetate-CoA ligase; KEGG: rpc:RPC_0683 phenylacetate-CoA ligase
YP_779933.1	TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_0682 phenylacetic acid degradation protein PaaD
YP_779934.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_779935.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpa:RPA4019 putative branched-chain amino acid ABC transporter system substrate-binding protein
YP_779936.1	PFAM: inner-membrane translocator; KEGG: rpa:RPA4020 possible branched-chain amino acid transport system permease protein
YP_779937.1	PFAM: inner-membrane translocator; KEGG: rpa:RPA4021 putative branched-chain amino acid ABC transport system permease protein livm (liv-I protein m)
YP_779938.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA4022 putative branched-chain amino acid ABC transport system, ATP-binding protein
YP_779939.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0676 ABC transporter related
YP_779940.1	KEGG: bja:bll4740 nonspecific acid phosphatase precursor
YP_779941.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rpd:RPD_1558 response regulator receiver
YP_779942.1	PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rpd:RPD_1559 ATP-binding region, ATPase-like
YP_779943.1	PFAM: Hemolysin-type calcium-binding region; Animal heme peroxidase; KEGG: rpd:RPD_1560 Animal heme peroxidase
YP_779944.1	KEGG: rpd:RPD_1561 type I secretion system ATPase, PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase
YP_779945.1	KEGG: rpd:RPD_1562 RTX toxins and related Ca2+-binding proteins-like
YP_779946.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rpd:RPD_1563 type I secretion membrane fusion protein, HlyD
YP_779949.1	KEGG: atc:AGR_pAT_139 hypothetical protein
YP_779950.1	PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr0034 putative transposase
YP_779951.1	PFAM: IS66 Orf2 family protein; KEGG: mag:amb0402 transposase and inactivated derivative
YP_779952.1	PFAM: transposase IS66; KEGG: mag:amb3325 transposase and inactivated derivative
YP_779954.1	KEGG: bja:blr6106 hypothetical protein
YP_779955.1	KEGG: rpd:RPD_3942 hypothetical protein
YP_779956.1	KEGG: rpd:RPD_3943 hypothetical protein
YP_779957.1	KEGG: rpd:RPD_3944 hypothetical protein
YP_779958.1	PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: rpd:RPD_3945 protein of unknown function DUF262
YP_779959.1	PFAM: Conjugal transfer TraD family protein; KEGG: rpd:RPD_3948 conjugal transfer TraD
YP_779960.1	KEGG: rpd:RPD_3949 hypothetical protein
YP_779961.1	MobA/MobL family protein
YP_779962.1	PFAM: Prophage CP4-57 regulatory; KEGG: rpc:RPC_4521 phage transcriptional regulator, AlpA
YP_779964.1	KEGG: hch:HCH_01988 probable phage protein
YP_779965.1	KEGG: hch:HCH_10007 putative threonine efflux protein
YP_779966.1	KEGG: hch:HCH_01987 probable phage protein
YP_779967.1	KEGG: nha:Nham_2758 transposase, IS4
YP_779968.1	PFAM: transposase, IS4 family protein; KEGG: nha:Nham_2758 transposase, IS4
YP_779970.1	KEGG: rpc:RPC_0991 hypothetical protein
YP_779971.1	PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: rpc:RPC_0990 recombinase
YP_779972.1	KEGG: rpc:RPC_0989 hypothetical protein
YP_779973.1	PFAM: putative methyltransferase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_0988 phosphatidylethanolamine N-methyltransferase
YP_779974.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_779975.1	PFAM: flagellar hook-length control protein; KEGG: rpc:RPC_0986 flagellar hook-length control protein
YP_779976.1	PFAM: flagellar hook capping protein; KEGG: rpc:RPC_0985 flagellar hook capping protein
YP_779977.1	TIGRFAM: lytic murein transglycosylase; KEGG: rpc:RPC_0984 lytic murein transglycosylase
YP_779978.1	KEGG: rpb:RPB_4120 hypothetical protein
YP_779979.1	KEGG: bbr:BB0831 hypothetical protein
YP_779980.1	KEGG: gvi:gll1315 hypothetical protein
YP_779981.1	PFAM: Cupin 2, conserved barrel domain protein; KEGG: rpc:RPC_0980 cupin 2, conserved barrel
YP_779982.1	KEGG: rpd:RPD_0618 cytochrome c, class I
YP_779983.1	KEGG: rpd:RPD_0619 putative L-sorbosone dehydrogenase
YP_779984.1	KEGG: rpc:RPC_0979 hypothetical protein
YP_779985.1	KEGG: rpb:RPB_4124 hypothetical protein
YP_779986.1	KEGG: mlo:mll9021 transposase
YP_779987.1	PFAM: Integrase, catalytic region; KEGG: sme:SMb20905 putative transposase protein
YP_779988.1	KEGG: rpa:RPA1289 hypothetical protein
YP_779989.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria
YP_779990.1	synthesizes RNA primers at the replication forks
YP_779991.1	KEGG: rpc:RPC_0969 hypothetical protein
YP_779992.1	KEGG: rpd:RPD_3977 hypothetical protein
YP_779993.1	PFAM: N-formylglutamate amidohydrolase; KEGG: rpc:RPC_0966 N-formylglutamate amidohydrolase
YP_779994.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_779995.1	PFAM: protein of unknown function DUF1194; KEGG: rpc:RPC_1144 protein of unknown function DUF1194
YP_779996.1	KEGG: rpc:RPC_1145 RNA methyltransferase
YP_779997.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rpa:RPA0949 putative multidrug efflux protein (NorM)
YP_779998.1	TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: bja:bll2649 putative hemolysin
YP_779999.1	PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: rpd:RPD_4306 nucleoside 2-deoxyribosyltransferase
YP_780001.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_780002.1	catalyzes the bidirectional exonucleolytic cleavage of DNA
YP_780003.1	PFAM: histone deacetylase superfamily; KEGG: rpc:RPC_1151 histone deacetylase superfamily
YP_780004.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rpc:RPC_1152 5'-nucleotidase-like
YP_780005.1	KEGG: rpc:RPC_1153 hypothetical protein
YP_780006.1	PFAM: Carboxylesterase, type B; protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: rme:Rmet_5225 protein of unknown function DUF1214
YP_780007.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpb:RPB_4455 enoyl-CoA hydratase/isomerase
YP_780008.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpc:RPC_1156 acyl-CoA dehydrogenase-like
YP_780009.1	PFAM: phage integrase family protein; KEGG: nha:Nham_0896 hypothetical protein
YP_780011.1	PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: ret:RHE_PA00038 probable insertion sequence transposase protein
YP_780012.1	KEGG: mag:amb3325 transposase and inactivated derivative
YP_780013.1	KEGG: mag:amb1129 hypothetical protein
YP_780014.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: bmb:BruAb1_1071 GalE-1, UDP-glucose 4-epimerase
YP_780016.1	PFAM: metallophosphoesterase; KEGG: bja:bll2356 serine/threonine protein phosphatase I
YP_780017.1	PFAM: peptidase C2, calpain; KEGG: ana:all1084 unknown protein
YP_780018.1	KEGG: bja:bll6293 HlyB/MsbA family ABC transporter; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter, transmembrane region; ABC transporter related; peptidase C39, bacteriocin processing; SMART: AAA ATPase
YP_780019.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bja:bll6292 probable Hemolysin secretion protein D
YP_780021.1	KEGG: ppu:PP3128 exopolysaccharide biosynthesis/transport protein, putative
YP_780022.1	PFAM: lipopolysaccharide biosynthesis; KEGG: ppu:PP3127 exopolysaccharide transport protein, putative
YP_780023.1	SMART: AAA ATPase; KEGG: sat:SYN_00778 general secretion pathway protein A
YP_780024.1	PFAM: polysaccharide export protein; KEGG: gme:Gmet_1444 polysaccharide export protein
YP_780026.1	PFAM: sugar transferase; KEGG: bja:blr2358 probable glycosyl transferase
YP_780027.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: jan:Jann_4236 tetratricopeptide TPR_2
YP_780028.1	TIGRFAM: eight transmembrane protein EpsH; KEGG: gme:Gmet_1503 hypothetical protein
YP_780029.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; glycosyl transferase WecB/TagA/CpsF; KEGG: gka:GK3311 teichoic acid biosynthesis
YP_780030.1	PFAM: glycosyl transferase, family 2; KEGG: ppu:PP3140 glycosyl transferase, group 2 family protein
YP_780031.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ccr:CC1146 NAD-dependent epimerase/dehydratase family protein
YP_780032.1	TIGRFAM: methyltransferase FkbM family; KEGG: fra:Francci3_4064 methyltransferase FkbM
YP_780033.1	KEGG: mca:MCA1423 glycosyl transferase, family 25
YP_780034.1	PFAM: glycosyl transferase, group 1; KEGG: ppu:PP3139 glycosyl transferase, group 1 family protein
YP_780035.1	PFAM: glycosyl transferase, family 2; KEGG: ppu:PP3137 glycosyl transferase, group 2 family protein
YP_780036.1	PFAM: glycosyl transferase, group 1; KEGG: ava:Ava_0842 glycosyl transferase, group 1
YP_780037.1	KEGG: nwi:Nwi_0542 hypothetical protein
YP_780041.1	KEGG: xcc:XCC1752 cellulase
YP_780042.1	PFAM: acyltransferase 3; KEGG: ade:Adeh_2069 acyltransferase 3
YP_780043.1	PFAM: acyltransferase 3; KEGG: atc:AGR_L_3583 exopolysaccharide production protein ExoZ
YP_780045.1	TIGRFAM: methyltransferase FkbM family; KEGG: nwi:Nwi_2400 methyltransferase FkbM
YP_780046.1	PFAM: acyltransferase 3; KEGG: ppu:PP2377 acetyltransferase Act, putative
YP_780047.1	KEGG: syn:slr0386 hypothetical protein
YP_780048.1	PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: dar:Daro_2421 membrane bound O-acyl transferase, MBOAT
YP_780049.1	KEGG: nha:Nham_4212 integrase, catalytic region
YP_780050.1	KEGG: nha:Nham_4211 transposase IS3/IS911
YP_780052.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bja:bll8129 UDP-glucose 6-dehydrogenase
YP_780053.1	PFAM: regulatory protein, LuxR; KEGG: rpd:RPD_2373 regulatory protein, LuxR
YP_780054.1	PFAM: type IV pilus assembly PilZ; KEGG: rpd:RPD_3053 type IV pilus assembly PilZ
YP_780055.1	KEGG: bja:bll6535 hypothetical protein
YP_780056.1	KEGG: rpa:RPA4550 hypothetical protein
YP_780057.1	PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpb:RPB_3063 ATPase
YP_780058.1	KEGG: rpb:RPB_3062 hypothetical protein
YP_780059.1	KEGG: rpb:RPB_3061 hypothetical protein
YP_780060.1	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_3060 sigma-24 (FecI-like)
YP_780061.1	KEGG: rpb:RPB_3059 hypothetical protein
YP_780063.1	PFAM: transposase IS3/IS911 family protein; KEGG: nha:Nham_2997 transposase IS3/IS911
YP_780064.1	PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr0034 putative transposase
YP_780065.1	PFAM: IS66 Orf2 family protein; KEGG: mag:amb0402 transposase and inactivated derivative
YP_780066.1	PFAM: transposase IS66; KEGG: mag:amb3325 transposase and inactivated derivative
YP_780067.1	KEGG: mag:amb1129 hypothetical protein
YP_780068.1	KEGG: mag:amb3325 transposase and inactivated derivative
YP_780069.1	KEGG: atc:AGR_L_547 hypothetical protein
YP_780070.1	KEGG: hch:HCH_02732 predicted acyltransferase
YP_780071.1	KEGG: nha:Nham_4483 ArdC gene in pSa(IncW plasmid)-like
YP_780072.1	KEGG: rpc:RPC_3939 transposase, mutator type
YP_780073.1	PFAM: transposase, mutator type; transposase, IS4 family protein; KEGG: rpc:RPC_3939 transposase, mutator type
YP_780074.1	KEGG: bja:blr3893 putative transposase
YP_780076.1	KEGG: rpc:RPC_3552 hypothetical protein
YP_780077.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA4135 GCN5-related N-acetyltransferase
YP_780078.1	involved in type III protein export during flagellum assembly
YP_780079.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_780080.1	PFAM: protein of unknown function DUF1217; KEGG: bja:blr6883 hypothetical protein
YP_780081.1	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_780082.1	PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: rpc:RPC_1089 flagellar motor switch protein FliM
YP_780083.1	KEGG: rpc:RPC_1090 hypothetical protein
YP_780084.1	TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rpc:RPC_1091 surface presentation of antigens (SpoA) protein
YP_780085.1	PFAM: flagellar motor switch protein FliG; KEGG: rpc:RPC_1092 flagellar motor switch protein FliG
YP_780086.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella
YP_780087.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella
YP_780088.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_780089.1	forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_780090.1	makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_780091.1	required for the assembly of the flagellar basal body P-ring; Bradyrhizobium japonicum has two types of flagella, a single thick flagella and a few thin flagella; the protein in this cluster is associated with the thin flagella
YP_780092.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella
YP_780093.1	KEGG: rpc:RPC_1100 hypothetical protein
YP_780094.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella
YP_780095.1	PFAM: flagellar basal body-associated protein FliL; KEGG: rpc:RPC_1102 flagellar basal body-associated protein FliL
YP_780096.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagellum
YP_780097.1	structural flagella protein; Bradyrhizobium has 2 types of flagella, thick and thin; the proteins in this cluster have been identified as making up the thin flagella and may be involved in swarming
YP_780098.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_780099.1	KEGG: rpc:RPC_1106 hypothetical protein
YP_780100.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_780101.1	a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation
YP_780102.1	PFAM: flagellar hook-length control protein; KEGG: rpc:RPC_1109 putative chemotaxis MotD protein
YP_780103.1	PFAM: Lytic transglycosylase, catalytic; KEGG: rpc:RPC_1110 lytic transglycosylase, catalytic
YP_780104.1	the hook connects flagellar basal body to the flagellar filament
YP_780105.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
YP_780106.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella
YP_780107.1	acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_780108.1	post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_780109.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella
YP_780110.1	FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella
YP_780111.1	membrane protein involved in the flagellar export apparatus
YP_780112.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium has one thick and several thin flagella; the Bradyrhizobium protein in this cluster are associated with the thin flagella
YP_780113.1	KEGG: rpc:RPC_1120 hypothetical protein
YP_780114.1	KEGG: rpc:RPC_1121 hypothetical protein
YP_780115.1	KEGG: rpc:RPC_1122 hypothetical protein
YP_780116.1	KEGG: rpc:RPC_1123 hypothetical protein
YP_780117.1	PFAM: transcriptional regulator domain protein; KEGG: rpc:RPC_1124 two component transcriptional regulator, winged helix family
YP_780118.1	KEGG: rpc:RPC_1125 hypothetical protein
YP_780119.1	KEGG: rpc:RPC_1126 hypothetical protein
YP_780120.1	PFAM: glycosyl transferase, group 1; KEGG: rpc:RPC_3209 glycosyl transferase, group 1
YP_780121.1	PFAM: Amylo-alpha-1,6-glucosidase; KEGG: rpc:RPC_3211 amylo-alpha-1,6-glucosidase
YP_780122.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3213 major facilitator superfamily MFS_1
YP_780124.1	PFAM: response regulator receiver; KEGG: gme:Gmet_2428 response regulator receiver domain protein (CheY-like)
YP_780125.1	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: ccr:CC0433 chemotaxis protein CheA
YP_780126.1	PFAM: CheW domain protein; KEGG: zmo:ZMO0078 chemotaxis protein
YP_780127.1	KEGG: vch:VC0098 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_780128.1	PFAM: MCP methyltransferase, CheR-type; KEGG: sde:Sde_3104 biotin biosynthesis protein BioC
YP_780129.1	PFAM: CheD family protein; KEGG: tbd:Tbd_1616 CheD, stimulates methylation of MCP proteins
YP_780130.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: bpa:BPP1476 protein-glutamate methylesterase
YP_780131.1	PFAM: chemotaxis sensory transducer; KEGG: cvi:CV2646 probable methyl-accepting chemotaxis protein
YP_780132.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mag:amb0579 anti-anti-sigma regulatory factor
YP_780133.1	KEGG: mag:amb2658 hypothetical protein
YP_780134.1	PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mag:amb2659 serine phosphatase RsbU
YP_780135.1	PFAM: Hpt domain protein
YP_780136.1	KEGG: dar:Daro_3006 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein
YP_780137.1	KEGG: rpc:RPC_2950 hypothetical protein
YP_780138.1	SMART: Rhodanese domain protein; KEGG: rpb:RPB_1051 rhodanese-like
YP_780139.1	TIGRFAM: Twin-arginine translocation pathway signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rpc:RPC_1923 ubiquinol-cytochrome c reductase, iron-sulfur subunit
YP_780140.1	KEGG: rpd:RPD_4203 nitrogen fixation-related protein
YP_780142.1	PFAM: VWA containing CoxE family protein; KEGG: rpb:RPB_0718 VWA containing CoxE-like
YP_780143.1	PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpd:RPD_0615 ATPase associated with various cellular activities, AAA_5
YP_780144.1	PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain; KEGG: rfr:Rfer_0524 hypothetical protein
YP_780145.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rfr:Rfer_0523 acyl-CoA dehydrogenase-like
YP_780146.1	PFAM: NLPA lipoprotein; KEGG: rpd:RPD_2183 putative taurine transport system protein
YP_780147.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpd:RPD_2184 binding-protein-dependent transport systems inner membrane component
YP_780148.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4534 ABC transporter related
YP_780149.1	KEGG: rpd:RPD_2186 hypothetical protein
YP_780150.1	KEGG: rpa:RPA1406 hypothetical protein
YP_780151.1	TIGRFAM: urea amidolyase related protein; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rpd:RPD_2188 allophanate hydrolase subunit 2
YP_780152.1	PFAM: Amidase; KEGG: ret:RHE_PE00117 putative amidase protein
YP_780153.1	KEGG: rpc:RPC_2372 hypothetical protein
YP_780154.1	KEGG: rpa:RPA0092 hypothetical protein
YP_780155.1	PFAM: regulatory protein, TetR; KEGG: rpa:RPA0093 transcriptional regulator, TetR family
YP_780156.1	PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_0123 PepSY-associated TM helix
YP_780157.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpa:RPA0095 putative multidrug efflux membrane fusion protein
YP_780158.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpa:RPA0096 putative multidrug-efflux transport protein
YP_780159.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: neu:NE0621 DUF176
YP_780160.1	PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: rpb:RPB_0946 iron-containing alcohol dehydrogenase
YP_780161.1	PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: rpd:RPD_1160 NADH ubiquinone oxidoreductase, 20 kDa subunit
YP_780162.1	PFAM: nickel-dependent hydrogenase, large subunit; KEGG: rpd:RPD_1161 nickel-dependent hydrogenase, large subunit
YP_780163.1	KEGG: rpd:RPD_1162 hydrogenase (NiFe) small subunit (HydA); TIGRFAM: hydrogenase (NiFe) small subunit HydA; Twin-arginine translocation pathway signal; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein
YP_780164.1	PFAM: nickel-dependent hydrogenase, large subunit; KEGG: rpc:RPC_3771 nickel-dependent hydrogenase, large subunit
YP_780165.1	TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: rpa:RPA0964 Ni/Fe-hydrogenase 1 B-type cytochrome subunit
YP_780166.1	TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52, hydrogen uptake protein; KEGG: rpa:RPA0965 hydrogenase maturation protein hupD
YP_780167.1	TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rpd:RPD_1167 hydrogenase assembly chaperone HypC/HupF
YP_780168.1	PFAM: hydrogenase-1 expression HyaE; KEGG: rpd:RPD_1168 hydrogenase-1 expression HyaE
YP_780169.1	PFAM: HupH hydrogenase expression protein; KEGG: rpd:RPD_1169 HupH hydrogenase expression protein
YP_780170.1	PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: rpd:RPD_1170 rubredoxin-type Fe(Cys)4 protein
YP_780171.1	KEGG: rpd:RPD_1171 putative hydrogenase expression/formation protein HupJ
YP_780172.1	KEGG: rpd:RPD_1172 coenzyme F420-reducing hydrogenase alpha subunit-like
YP_780173.1	TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: rpc:RPC_3762 hydrogenase nickel insertion protein HypA
YP_780174.1	TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: rpd:RPD_1174 hydrogenase accessory protein HypB
YP_780175.1	TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: rpd:RPD_1175 (NiFe) hydrogenase maturation protein HypF
YP_780176.1	TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rpc:RPC_3760 hydrogenase assembly chaperone HypC/HupF
YP_780177.1	TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: rpa:RPA0977 hydrogenase expression/formation protein hypD
YP_780178.1	TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rpd:RPD_1178 hydrogenase expression/formation protein HypE
YP_780179.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpd:RPD_1179 sigma-54 factor, interaction region
YP_780180.1	KEGG: rpd:RPD_1180 ATP-binding region, ATPase-like; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_780181.1	KEGG: bja:bsl6114 hypothetical protein
YP_780182.1	PFAM: metallophosphoesterase; KEGG: rpc:RPC_1185 metallophosphoesterase
YP_780183.1	PFAM: SMC domain protein; KEGG: rpc:RPC_1186 hypothetical protein
YP_780184.1	KEGG: rpc:RPC_1277 hypothetical protein
YP_780185.1	PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rpc:RPC_1191 thiamine pyrophosphate enzyme-like TPP binding region
YP_780186.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: rpc:RPC_1192 transcriptional regulator, AsnC family
YP_780187.1	PFAM: Rhodanese domain protein; KEGG: rpc:RPC_1202 rhodanese-like
YP_780188.1	KEGG: rpc:RPC_1208 hypothetical protein
YP_780189.1	KEGG: rpd:RPD_4184 hypothetical protein
YP_780190.1	PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rpb:RPB_1752 molybdopterin oxidoreductase
YP_780191.1	Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway
YP_780192.1	ferredoxin-dependent assimilatory nitrite reductase
YP_780193.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: rpb:RPB_1755 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_780194.1	PFAM: globin; KEGG: rpb:RPB_1756 globin
YP_780195.1	KEGG: rpb:RPB_1758 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase
YP_780196.1	TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1759 nitrate transport permease
YP_780197.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_1760 twin-arginine translocation pathway signal
YP_780198.1	KEGG: rpc:RPC_1210 putative nitrate transporter component, NrtA
YP_780199.1	PFAM: response regulator receiver; ANTAR domain protein; KEGG: rpc:RPC_1211 response regulator receiver (CheY-like) and ANTAR domain protein
YP_780200.1	PFAM: BA14K family protein; KEGG: rpb:RPB_1022 BA14K-like
YP_780201.1	KEGG: rpc:RPC_1220 hypothetical protein
YP_780202.1	KEGG: rpb:RPB_4256 hypothetical protein
YP_780203.1	KEGG: rpc:RPC_1225 hypothetical protein
YP_780204.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xcv:XCV0196 putative glyoxalase family protein
YP_780205.1	KEGG: rpc:RPC_1226 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain
YP_780206.1	KEGG: rpc:RPC_1227 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain
YP_780207.1	PFAM: response regulator receiver; KEGG: rpc:RPC_1228 response regulator receiver domain protein (CheY-like)
YP_780208.1	KEGG: rpc:RPC_1229 hypothetical protein
YP_780209.1	KEGG: rpc:RPC_1230 hypothetical protein
YP_780210.1	PFAM: glycosyl transferase, group 1; glycosyl transferase, family 20; KEGG: rpb:RPB_1021 alpha,alpha-trehalose-phosphate synthase (UDP-forming)
YP_780212.1	TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: csa:Csal_1795 anion transporter
YP_780213.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_780214.1	PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; KEGG: rpc:RPC_2210 transcriptional regulator, LuxR family
YP_780215.1	KEGG: rpc:RPC_2211 hypothetical protein
YP_780216.1	KEGG: rpc:RPC_2214 hypothetical protein
YP_780217.1	KEGG: rpc:RPC_2213 hypothetical protein
YP_780218.1	TIGRFAM: putative addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: rpc:RPC_2215 putative transcriptional regulators, CopG/Arc/MetJ DNA-binding domain
YP_780219.1	PFAM: NnrUfamily protein; KEGG: rpa:RPA1485 putative NnrU protein
YP_780220.1	PFAM: NnrS family protein; KEGG: rpc:RPC_1235 NnrS
YP_780221.1	KEGG: rpc:RPC_1236 hypothetical protein
YP_780222.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rpd:RPD_3789 response regulator receiver
YP_780224.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpd:RPD_2610 antenna complex, alpha/beta subunit
YP_780225.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpb:RPB_4032 antenna complex, alpha/beta subunit
YP_780226.1	PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rpc:RPC_1240 PucC protein
YP_780227.1	KEGG: rpc:RPC_1241 hypothetical protein
YP_780228.1	KEGG: rpc:RPC_1242 hypothetical protein
YP_780229.1	PFAM: FAD dependent oxidoreductase; KEGG: rpd:RPD_3782 putative monooxygenase
YP_780230.1	KEGG: rpc:RPC_1243 hypothetical protein
YP_780231.1	KEGG: rpc:RPC_1244 hypothetical protein
YP_780232.1	PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: rpd:RPD_3777 coenzyme F420 hydrogenase/dehydrogenase beta subunit-like
YP_780233.1	PFAM: protein of unknown function DUF427; KEGG: rpb:RPB_4022 protein of unknown function DUF427
YP_780234.1	KEGG: rpc:RPC_1246 hypothetical protein
YP_780235.1	KEGG: rpd:RPD_3774 hypothetical protein
YP_780236.1	KEGG: rpb:RPB_4019 hypothetical protein
YP_780237.1	KEGG: rpc:RPC_1249 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase
YP_780238.1	KEGG: rpc:RPC_1250 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase, ChlI subunit; SMART: AAA ATPase
YP_780239.1	involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH
YP_780240.1	KEGG: rpc:RPC_1252 transcriptional regulator, AraC family; TIGRFAM: PAS sensor protein; PFAM: helix-turn-helix- domain containing protein, AraC type; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_780241.1	KEGG: rpc:RPC_1252 transcriptional regulator, AraC family; TIGRFAM: PAS sensor protein; PFAM: helix-turn-helix- domain containing protein, AraC type; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_780242.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_1253 methyl-accepting chemotaxis sensory transducer
YP_780243.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_3380 methyl-accepting chemotaxis sensory transducer
YP_780244.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_780245.1	KEGG: rpc:RPC_1259 hypothetical protein
YP_780246.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_1260 alpha/beta hydrolase fold
YP_780247.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_1261 amine oxidase
YP_780248.1	PFAM: Squalene/phytoene synthase; KEGG: rpc:RPC_1262 squalene/phytoene synthase
YP_780249.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_780250.1	KEGG: rpb:RPB_4008 hypothetical protein
YP_780251.1	KEGG: rpc:RPC_1265 hypothetical protein
YP_780252.1	PFAM: hydroxyneurosporene synthase; KEGG: rpc:RPC_1288 hydroxyneurosporene synthase
YP_780253.1	KEGG: rpb:RPB_0709 integral membrane protein-like
YP_780254.1	PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: jan:Jann_0393 NAD-dependent epimerase/dehydratase
YP_780255.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_1289 FAD dependent oxidoreductase
YP_780256.1	PFAM: Polyprenyl synthetase; KEGG: rpc:RPC_1290 polyprenyl synthetase
YP_780257.1	PFAM: O-methyltransferase, family 2; Methyltransferase type 12; KEGG: rpc:RPC_1291 O-methyltransferase, family 2
YP_780258.1	TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_1292 chlorophyll synthesis pathway, BchC
YP_780259.1	KEGG: rpc:RPC_1293 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein
YP_780260.1	TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpc:RPC_1294 chlorophyllide reductase subunit Y
YP_780261.1	TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase, component 1; protein of unknown function DUF1197; KEGG: rpc:RPC_1295 chlorophyllide reductase subunit Z
YP_780262.1	KEGG: rpc:RPC_1296 hypothetical protein
YP_780263.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_1297 antenna complex, alpha/beta subunit
YP_780264.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_1298 antenna complex, alpha/beta subunit
YP_780265.1	TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: rpc:RPC_1299 photosynthetic reaction center L subunit
YP_780266.1	TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: rpc:RPC_1300 photosynthetic reaction center M subunit
YP_780267.1	KEGG: rpc:RPC_1301 putative PAS/PAC sensor protein; TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix, Fis-type; SMART: PAS domain containing protein
YP_780268.1	TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rpb:RPB_3992 bacteriochlorophyll/chlorophyll synthetase
YP_780269.1	PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rpc:RPC_1303 PucC protein
YP_780270.1	TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: rpb:RPB_3990 geranylgeranyl reductase
YP_780271.1	PFAM: TspO/MBR family protein; KEGG: rpc:RPC_1305 TspO and MBR like proteins
YP_780272.1	KEGG: rpc:RPC_1306 hypothetical protein
YP_780273.1	PFAM: cytochrome c, class I; KEGG: rpc:RPC_1307 cytochrome c, class I
YP_780274.1	KEGG: rpc:RPC_1308 putative PAS/PAC sensor protein; TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_780275.1	TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; Phytochrome, central region domain protein; PAS fold-2 domain protein; PAS fold domain protein; KEGG: rpc:RPC_1309 putative PAS/PAC sensor protein
YP_780276.1	PFAM: Haem oxygenase; KEGG: rpc:RPC_1310 heme oxygenase (decyclizing)
YP_780277.1	KEGG: rpc:RPC_1311 cobalamin B12-binding
YP_780278.1	PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rpc:RPC_1312 2-vinyl bacteriochlorophyllide hydratase
YP_780279.1	light-independent reduction of protochlorophyllide to form chlorophyllide a
YP_780280.1	light-independent reduction of protochlorophyllide to form chlorophyllide a
YP_780281.1	involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH
YP_780282.1	light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production
YP_780283.1	catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine
YP_780284.1	PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rpc:RPC_1318 PucC protein
YP_780285.1	PFAM: photosynthetic reaction centre, H-chain; PRC-barrel domain protein; KEGG: rpc:RPC_1319 photosynthetic reaction centre, H-chain
YP_780286.1	KEGG: rpc:RPC_1320 putative photosynthetic complex assembly protein
YP_780287.1	KEGG: rpc:RPC_1321 putative photosynthetic complex assembly protein
YP_780288.1	KEGG: rpc:RPC_1322 hypothetical protein
YP_780289.1	oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis
YP_780290.1	KEGG: rpc:RPC_1324 hypothetical protein
YP_780291.1	catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine
YP_780292.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_1326 transcriptional regulator, LysR family
YP_780293.1	type III RuBisCO; involved in carbon fixation
YP_780294.1	PFAM: ribulose bisphosphate carboxylase, small chain; KEGG: rpc:RPC_1328 ribulose-bisphosphate carboxylase
YP_780295.1	PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_1329 AAA ATPase, central region
YP_780296.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_1330 alpha/beta hydrolase fold
YP_780297.1	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
YP_780298.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: rpc:RPC_1332 oligopeptidase B
YP_780299.1	PFAM: SlyX family protein; KEGG: rpc:RPC_1351 SlyX
YP_780300.1	KEGG: rpc:RPC_1352 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_780301.1	PFAM: CsbD family protein; KEGG: rpc:RPC_1353 CsbD-like
YP_780302.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; KEGG: rpc:RPC_1355 multi-sensor hybrid histidine kinase
YP_780303.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr2408 hypothetical protein
YP_780304.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bja:blr2409 hypothetical protein
YP_780305.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_1356 secretion protein HlyD
YP_780306.1	PFAM: acriflavin resistance protein; KEGG: rpd:RPD_4073 acriflavin resistance protein
YP_780307.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_1358 transcriptional regulator, TetR family
YP_780308.1	KEGG: rpc:RPC_1359 hypothetical protein
YP_780309.1	PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: rpc:RPC_1360 transcriptional regulator, DeoR family
YP_780310.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane
YP_780311.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_1362 ABC transporter related
YP_780312.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpd:RPD_4067 ABC transporter related
YP_780313.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4214 binding-protein-dependent transport systems inner membrane component
YP_780314.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_1365 binding-protein-dependent transport systems inner membrane component
YP_780315.1	KEGG: rpc:RPC_1366 hypothetical protein
YP_780316.1	PFAM: extracellular solute-binding protein, family 1; KEGG: rpd:RPD_4063 extracellular solute-binding protein, family 1
YP_780317.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rpc:RPC_1368 NADH:flavin oxidoreductase/NADH oxidase
YP_780318.1	PFAM: inner-membrane translocator; KEGG: rpc:RPC_1370 inner-membrane translocator
YP_780319.1	PFAM: inner-membrane translocator; KEGG: rpc:RPC_1371 inner-membrane translocator
YP_780320.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1372 ABC transporter related
YP_780321.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1373 ABC transporter related
YP_780322.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_1374 extracellular ligand-binding receptor
YP_780323.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpb:RPB_4203 lytic murein transglycosylase
YP_780324.1	TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: rpc:RPC_1376 addiction module toxin, RelE/StbE
YP_780325.1	TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: rpc:RPC_1377 RelB antitoxin
YP_780326.1	PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: rpc:RPC_1378 transcriptional regulator, XRE family
YP_780327.1	Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates
YP_780328.1	KEGG: rpa:RPA4393 hypothetical protein
YP_780329.1	KEGG: nha:Nham_1099 hypothetical protein
YP_780330.1	PFAM: metallophosphoesterase; KEGG: rpc:RPC_1382 metallophosphoesterase
YP_780331.1	PFAM: NUDIX hydrolase; KEGG: rpb:RPB_4195 NUDIX hydrolase
YP_780332.1	PFAM: MscS Mechanosensitive ion channel; KEGG: rpb:RPB_4194 MscS mechanosensitive ion channel
YP_780333.1	PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_3258 GCN5-related N-acetyltransferase
YP_780334.1	PFAM: GCN5-related N-acetyltransferase; KEGG: eba:p1B136 putative histone acetyltransferase-related protein
YP_780335.1	KEGG: rpc:RPC_2943 hypothetical protein
YP_780336.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpd:RPD_4046 TonB-dependent receptor
YP_780337.1	KEGG: rpc:RPC_1404 hypothetical protein
YP_780338.1	KEGG: rpc:RPC_1403 hypothetical protein
YP_780339.1	KEGG: rpa:RPA4382 hypothetical protein
YP_780340.1	KEGG: rpc:RPC_1401 hypothetical protein
YP_780341.1	PFAM: ribonuclease T2; KEGG: rpc:RPC_1400 ribonuclease T2
YP_780342.1	TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: rpc:RPC_1399 riboflavin biosynthesis protein RibF
YP_780343.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: rpc:RPC_1398 transferase hexapeptide repeat
YP_780344.1	KEGG: rpb:RPB_4184 hypothetical protein
YP_780345.1	TIGRFAM: conserved hypothetical protein; KEGG: rpb:RPB_4183 hypothetical protein
YP_780346.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme
YP_780347.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_780348.1	KEGG: rpc:RPC_1393 hypothetical protein
YP_780349.1	PFAM: peptidase M16 domain protein; KEGG: rpc:RPC_1392 peptidase M16-like
YP_780350.1	PFAM: peptidase M16 domain protein; KEGG: rpc:RPC_1391 peptidase M16-like
YP_780351.1	PFAM: Class I peptide chain release factor; KEGG: bja:blr7486 hypothetical protein
YP_780352.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
YP_780353.1	KEGG: ava:Ava_B0335 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
YP_780354.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_780355.1	PFAM: regulatory protein, MarR; KEGG: rpc:RPC_1387 transcriptional regulator, MarR family
YP_780356.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_1386 two component transcriptional regulator, winged helix family
YP_780357.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_1385 periplasmic sensor signal transduction histidine kinase
YP_780358.1	catalyzes the formation of L-proline from pyrroline-5-carboxylate
YP_780359.1	KEGG: rpc:RPC_1407 hypothetical protein
YP_780360.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_780361.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_780362.1	KEGG: rpc:RPC_1410 hypothetical protein
YP_780363.1	PFAM: protein of unknown function DUF152; KEGG: rpa:RPA4360 DUF152
YP_780364.1	PFAM: protein of unknown function DUF185; KEGG: rpc:RPC_1412 protein of unknown function DUF185
YP_780365.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_780366.1	PFAM: protein of unknown function DUF526; KEGG: rpc:RPC_1414 protein of unknown function DUF526
YP_780367.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_780368.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_780369.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_780370.1	KEGG: rpb:RPB_4158 hypothetical protein
YP_780371.1	PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_1419 MaoC-like dehydratase
YP_780372.1	PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_1420 MaoC-like dehydratase
YP_780373.1	KEGG: rpc:RPC_1421 hypothetical protein
YP_780374.1	KEGG: rpc:RPC_1422 hypothetical protein
YP_780375.1	KEGG: rpc:RPC_1424 hypothetical protein
YP_780376.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpa:RPA3992 fumarylacetoacetate (FAA) hydrolase
YP_780377.1	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1426 ABC transporter related
YP_780378.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rpc:RPC_1427 UDP-glucose 4-epimerase
YP_780379.1	TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase, family 9; KEGG: rpc:RPC_1428 lipopolysaccharide heptosyltransferase I
YP_780380.1	TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: rpc:RPC_1429 HAD-superfamily hydrolase subfamily IIIA
YP_780381.1	TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase, family 9; KEGG: rpc:RPC_1430 lipopolysaccharide heptosyltransferase II
YP_780382.1	TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rpb:RPB_1602 ADP-L-glycero-D-manno-heptose-6-epimerase
YP_780383.1	TIGRFAM: cytidyltransferase-related domain; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: rpc:RPC_1432 RfaE bifunctional protein, domain I
YP_780384.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rpc:RPC_1433 NAD-dependent epimerase/dehydratase
YP_780385.1	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rpc:RPC_1434 oxidoreductase-like
YP_780386.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: rpd:RPD_1620 DegT/DnrJ/EryC1/StrS aminotransferase
YP_780387.1	TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: rpc:RPC_1436 integral membrane protein MviN
YP_780388.1	PFAM: Carbamoyltransferase; KEGG: rpc:RPC_1437 carbamoyltransferase
YP_780389.1	KEGG: rpc:RPC_1438 hypothetical protein
YP_780390.1	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpc:RPC_1439 carbon-monoxide dehydrogenase
YP_780391.1	PFAM: cytochrome c, class II; KEGG: rpc:RPC_1440 cytochrome c, class II
YP_780392.1	KEGG: rpc:RPC_1441 putative diheme cytochrome c-553
YP_780393.1	KEGG: rpc:RPC_1443 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_780394.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_1444 phosphatidylethanolamine N-methyltransferase
YP_780395.1	PFAM: metallophosphoesterase; KEGG: rpc:RPC_1445 metallophosphoesterase
YP_780396.1	PFAM: glycosyl transferase, group 1; KEGG: rpc:RPC_1446 glycosyl transferase, group 1
YP_780397.1	PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rpc:RPC_1447 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_780398.1	KEGG: rpc:RPC_1449 hypothetical protein
YP_780399.1	PFAM: nucleoside:H+ symporter; major facilitator superfamily MFS_1; KEGG: rpc:RPC_1450 major facilitator superfamily MFS_1
YP_780400.1	PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: rpc:RPC_1451 mandelate racemase/muconate lactonizing enzyme
YP_780401.1	PFAM: protein of unknown function DUF140; KEGG: rpc:RPC_1452 protein of unknown function DUF140
YP_780402.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1453 ABC transporter related
YP_780403.1	PFAM: Mammalian cell entry related domain protein; KEGG: rpc:RPC_1454 mammalian cell entry related
YP_780404.1	KEGG: rpc:RPC_1455 hypothetical protein
YP_780405.1	PFAM: Hpt domain protein; KEGG: rpc:RPC_1456 Hpt domain protein
YP_780406.1	PFAM: ferredoxin; KEGG: rpc:RPC_1457 ferredoxin
YP_780407.1	PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_1644 thioesterase superfamily
YP_780408.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: rpd:RPD_1645 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_780410.1	KEGG: rpa:RPA3375 hypothetical protein
YP_780411.1	KEGG: cgb:cg3398 DNA or RNA helicase of superfamily II
YP_780412.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_1221 periplasmic sensor hybrid histidine kinase
YP_780413.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; KEGG: rpc:RPC_1464 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
YP_780414.1	KEGG: rpc:RPC_1465 hypothetical protein
YP_780415.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_1466 diguanylate cyclase (GGDEF domain)
YP_780416.1	PFAM: cobalamin B12-binding domain protein; KEGG: rpc:RPC_1467 cobalamin B12-binding
YP_780417.1	KEGG: rpc:RPC_1468 hypothetical protein
YP_780418.1	PFAM: GCN5-related N-acetyltransferase; KEGG: stm:STM2905 putative acetyltransferase
YP_780419.1	KEGG: plu:plu3889 hypothetical protein
YP_780420.1	KEGG: rpc:RPC_1469 hypothetical protein
YP_780421.1	PFAM: protein of unknown function DUF892; KEGG: rpc:RPC_1470 protein of unknown function DUF892
YP_780422.1	KEGG: rpc:RPC_1471 hypothetical protein
YP_780423.1	KEGG: rpc:RPC_1472 hypothetical protein
YP_780425.1	KEGG: bcl:ABC1987 hypothetical protein
YP_780426.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_3408 ErfK/YbiS/YcfS/YnhG
YP_780427.1	PFAM: UspA domain protein; KEGG: rpc:RPC_1477 UspA
YP_780428.1	PFAM: Phosphoglycerate mutase; KEGG: rpc:RPC_1478 putative phosphohistidine phosphatase, SixA
YP_780429.1	PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_1479 FAD dependent oxidoreductase
YP_780430.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
YP_780431.1	KEGG: rpa:RPA3935 hypothetical protein
YP_780433.1	PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: rpb:RPB_3817 hypothetical protein
YP_780434.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rpc:RPC_1486 flagellar hook-associated protein
YP_780435.1	KEGG: rpa:RPA3930 hypothetical protein
YP_780436.1	KEGG: cbu:CBU_0674 sugar isomerase family protein
YP_780437.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: cbu:CBU_0673 histidine biosynthesis bifunctional protein HisB
YP_780438.1	similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity
YP_780439.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cbu:CBU_0676 NAD dependent epimerase/dehydratase
YP_780440.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cbu:CBU_0677 NAD dependent epimerase/dehydratase family protein
YP_780441.1	TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: cbu:CBU_0678 ADP-heptose synthase, putative
YP_780442.1	PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: cbu:CBU_0679 oxidoreductase, Gfo/Idh/MocA family
YP_780443.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: cbu:CBU_0680 UDP-glucose/GDP-mannose dehydrogenase family protein
YP_780444.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: cbu:CBU_0681 hypothetical protein
YP_780445.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cbu:CBU_0682 hypothetical protein
YP_780446.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: rpa:RPA3925 putative dTDP-glucose 4,6-dehydratase
YP_780447.1	PFAM: Transketolase domain protein; KEGG: mag:amb0066 putative transketolase N-terminal section
YP_780448.1	PFAM: Transketolase, central region; Transketolase domain protein; KEGG: bja:blr5427 hypothetical transketolase family protein
YP_780449.1	KEGG: mag:amb0076 hypothetical protein
YP_780450.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nfa:nfa29060 hypothetical protein
YP_780451.1	PFAM: aminotransferase, class V; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mag:amb0075 predicted pyridoxal phosphate-dependent enzyme
YP_780452.1	PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: nwi:Nwi_0650 hypothetical protein
YP_780453.1	structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_780454.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpb:RPB_3801 TPR repeat protein
YP_780455.1	structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_780456.1	post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA; Bradyrhizobium has one thick and several thin flagella, the Bradyrhizobium protein in this cluster is associated with the thin flagella
YP_780457.1	acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum
YP_780458.1	KEGG: rpc:RPC_1493 hypothetical protein
YP_780459.1	KEGG: rpc:RPC_1495 hypothetical protein
YP_780460.1	KEGG: rpc:RPC_1496 hypothetical protein
YP_780461.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_780462.1	regulator of the sigma 54 transcriptional activator FlbD; represses FlbD when the class II flagellar structure is absent and activates FlbD when the structure is present
YP_780463.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: rpc:RPC_1499 transcriptional regulators, TraR/DksA family
YP_780464.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4407 methyl-accepting chemotaxis sensory transducer
YP_780465.1	part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod
YP_780466.1	required for the assembly of the flagellar basal body P-ring; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum
YP_780467.1	makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella
YP_780468.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum
YP_780469.1	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring
YP_780470.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_780471.1	KEGG: rpc:RPC_1510 hypothetical protein
YP_780472.1	KEGG: rpc:RPC_1511 hypothetical protein
YP_780473.1	KEGG: rpc:RPC_1512 tetratricopeptide TPR_2
YP_780474.1	PFAM: major facilitator superfamily MFS_1; KEGG: xcb:XC_1456 transmembrane transport protein
YP_780475.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_3380 methyl-accepting chemotaxis sensory transducer
YP_780476.1	KEGG: rpd:RPD_3191 hypothetical protein
YP_780477.1	KEGG: pfl:PFL_3578 sensory box sensor histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_780478.1	KEGG: nha:Nham_1689 hypothetical protein
YP_780479.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_780480.1	KEGG: rpc:RPC_1516 hypothetical protein
YP_780481.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_780482.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
YP_780483.1	forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagella
YP_780484.1	FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_780485.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_780486.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
YP_780487.1	KEGG: rpc:RPC_1524 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_780488.1	KEGG: sas:SAS0037 hypothetical protein
YP_780489.1	KEGG: ret:RHE_PF00117 hypothetical protein
YP_780490.1	PFAM: import inner membrane translocase, subunit Tim44; KEGG: rpc:RPC_1526 import inner membrane translocase, subunit Tim44
YP_780491.1	KEGG: rpd:RPD_1702 hypothetical protein
YP_780492.1	PFAM: Glutathione S-transferase, C-terminal domain; KEGG: rpc:RPC_1528 glutathione S-transferase-like
YP_780493.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bja:blr5799 hypothetical protein
YP_780494.1	KEGG: rpc:RPC_1529 formin
YP_780495.1	KEGG: rpb:RPB_3766 hypothetical protein
YP_780496.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: nha:Nham_3955 transposase IS116/IS110/IS902
YP_780497.1	KEGG: rpa:RPA3877 hypothetical protein
YP_780498.1	KEGG: rpd:RPD_1706 hypothetical protein
YP_780499.1	PFAM: plasmid stabilization system; KEGG: rpc:RPC_1531 plasmid stabilization system
YP_780500.1	TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: rpa:RPA3876 fumarate hydratase, class I
YP_780501.1	KEGG: rpd:RPD_1709 hypothetical protein
YP_780502.1	KEGG: rpb:RPB_3761 hypothetical protein
YP_780503.1	KEGG: rpc:RPC_1535 hypothetical protein
YP_780504.1	KEGG: rpa:RPA3873 hypothetical protein
YP_780505.1	PFAM: Carotenoid oxygenase; KEGG: rpc:RPC_1536 carotenoid oxygenase
YP_780506.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_1537 putative transcriptional regulator, TetR family
YP_780507.1	PFAM: nuclear protein SET; KEGG: rpc:RPC_1538 nuclear protein SET
YP_780508.1	KEGG: rpd:RPD_1715 hypothetical protein
YP_780509.1	PFAM: helix-turn-helix domain protein; KEGG: rpb:RPB_3757 transcriptional regulator, XRE family
YP_780510.1	PFAM: DSBA oxidoreductase; KEGG: rpc:RPC_1542 DsbA oxidoreductase
YP_780511.1	KEGG: rpa:RPA3867 hypothetical protein
YP_780512.1	PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rpb:RPB_3754 peptidase C14, caspase catalytic subunit P20
YP_780513.1	KEGG: rpc:RPC_1543 hypothetical protein
YP_780514.1	KEGG: rpc:RPC_1545 hypothetical protein
YP_780515.1	KEGG: rpc:RPC_1546 hypothetical protein
YP_780516.1	KEGG: rpc:RPC_1548 hypothetical protein
YP_780517.1	KEGG: rpc:RPC_1550 hypothetical protein
YP_780518.1	KEGG: rpc:RPC_1551 hypothetical protein
YP_780519.1	KEGG: rpb:RPB_3744 hypothetical protein
YP_780521.1	PFAM: type IV pilus assembly PilZ; KEGG: rpa:RPA1825 hypothetical protein
YP_780522.1	KEGG: lxx:Lxx24252 hypothetical protein
YP_780523.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_780524.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_780525.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_780526.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_780527.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_780528.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: rpc:RPC_1575 peptidase S9, prolyl oligopeptidase active site region
YP_780529.1	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: rpb:RPB_3734 sodium/hydrogen exchanger
YP_780530.1	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: rpc:RPC_1573 potassium efflux system protein
YP_780531.1	Converts isocitrate to alpha ketoglutarate
YP_780532.1	TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); protein of unknown function DUF559; KEGG: rpc:RPC_1577 RNA methyltransferase TrmH, group 1
YP_780533.1	KEGG: rru:Rru_A3537 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
YP_780534.1	activates RNA polymerase to cleave back-tracked RNA during elongational pausing
YP_780535.1	PFAM: protein of unknown function DUF1476; KEGG: rpc:RPC_1583 protein of unknown function DUF1476
YP_780536.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_780537.1	With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway
YP_780538.1	KEGG: rpb:RPB_3717 hypothetical protein
YP_780539.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_780541.1	PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_1590 thioesterase superfamily
YP_780542.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_780543.1	PFAM: acyltransferase 3; KEGG: rpc:RPC_1592 acyltransferase 3
YP_780544.1	PFAM: protein of unknown function DUF427; KEGG: bja:blr5716 hypothetical protein
YP_780545.1	PFAM: BolA family protein; KEGG: rpc:RPC_1594 BolA-like protein
YP_780546.1	PFAM: low temperature requirement A; KEGG: rpc:RPC_1595 low temperature requirement A
YP_780547.1	KEGG: rpc:RPC_1597 hypothetical protein
YP_780548.1	PFAM: protein of unknown function DUF323; KEGG: rpc:RPC_1598 protein of unknown function DUF323
YP_780549.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: rpd:RPD_1760 glutaredoxin-related protein
YP_780550.1	PFAM: Appr-1-p processing domain protein; KEGG: rpc:RPC_1600 Appr-1-p processing
YP_780551.1	PFAM: beta-lactamase; KEGG: rpc:RPC_1601 beta-lactamase
YP_780552.1	KEGG: lxx:Lxx01200 hypothetical protein
YP_780553.1	PFAM: fatty acid desaturase; KEGG: rpa:RPA1603 putative fatty acid desaturase
YP_780554.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hch:HCH_03828 lactoylglutathione lyase
YP_780555.1	KEGG: rpd:RPD_0266 hypothetical protein
YP_780556.1	PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rpc:RPC_2348 putative signal transduction histidine kinase
YP_780559.1	PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bja:blr5707 putative threonine aldolase
YP_780560.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_780561.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_4384 hypothetical protein
YP_780562.1	KEGG: rpc:RPC_1604 hypothetical protein
YP_780563.1	PFAM: Cupin 2, conserved barrel domain protein; KEGG: rpc:RPC_1605 cupin 2, conserved barrel
YP_780564.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_780565.1	PFAM: cytochrome B561; KEGG: bja:bll5701 putative cytochrome b561
YP_780566.1	PFAM: MOSC domain containing protein; KEGG: rpc:RPC_1607 MOSC
YP_780567.1	KEGG: rpa:RPA3582 hypothetical protein
YP_780568.1	KEGG: rpc:RPC_1609 hypothetical protein
YP_780569.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_780571.1	PFAM: ribulose-phosphate 3-epimerase; KEGG: rpd:RPD_1771 ribulose-phosphate 3-epimerase
YP_780572.1	PFAM: Calcium-binding EF-hand-containing protein; KEGG: rpc:RPC_1615 calcium-binding EF-hand
YP_780573.1	PFAM: peptidase S58, DmpA; KEGG: nha:Nham_2617 peptidase S58, DmpA
YP_780574.1	PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: rpc:RPC_1617 cytochrome c biogenesis protein, transmembrane region
YP_780575.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpa:RPA3811 excinuclease ABC, C subunit, N-terminal
YP_780576.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_1618 extracellular ligand-binding receptor
YP_780577.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1619 ABC transporter related
YP_780578.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1620 ABC transporter related
YP_780579.1	PFAM: inner-membrane translocator; KEGG: rpc:RPC_1621 inner-membrane translocator
YP_780580.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_1779 inner-membrane translocator
YP_780581.1	KEGG: rpc:RPC_1623 hypothetical protein
YP_780582.1	TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_1629 3-oxoadipate enol-lactonase
YP_780583.1	PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rpa:RPA3804 hypothetical protein
YP_780584.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rpc:RPC_1631 (2Fe-2S)-binding
YP_780585.1	PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rpc:RPC_1632 molybdopterin dehydrogenase, FAD-binding
YP_780586.1	PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_1633 ATPase associated with various cellular activities, AAA_5
YP_780587.1	PFAM: VWA containing CoxE family protein; KEGG: rpc:RPC_1634 VWA containing CoxE-like
YP_780588.1	PFAM: protein of unknown function DUF182; KEGG: rpa:RPA3799 DUF182
YP_780589.1	KEGG: rpa:RPA3798 xanthine dehydrogenase accessory factor
YP_780590.1	PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; molybdopterin binding domain; KEGG: rpc:RPC_1637 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
YP_780591.1	TIGRFAM: methyltransferase FkbM family; KEGG: ret:RHE_PE00048 hypothetical protein
YP_780592.1	KEGG: rpc:RPC_1639 hypothetical protein
YP_780593.1	KEGG: rpc:RPC_1641 hypothetical protein
YP_780594.1	PFAM: regulatory protein, TetR; KEGG: rpa:RPA3791 probable transcriptional regulator, TetR family
YP_780595.1	KEGG: rpb:RPB_3668 putative efflux protein
YP_780596.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA3789 putative ATP-binding component of a transport system
YP_780597.1	PFAM: ABC-2 type transporter; KEGG: rpd:RPD_1794 ABC-2
YP_780598.1	KEGG: rpb:RPB_3664 hypothetical protein
YP_780599.1	KEGG: rpc:RPC_1642 hypothetical protein
YP_780600.1	KEGG: rpd:RPD_1797 hypothetical protein
YP_780601.1	PFAM: protein of unknown function DUF1130; KEGG: rpc:RPC_1643 protein of unknown function DUF1130
YP_780602.1	PFAM: protein of unknown function DUF72; KEGG: rpc:RPC_1644 protein of unknown function DUF72
YP_780603.1	PFAM: glycosyl transferase, family 2; GtrA family protein; KEGG: rpc:RPC_1645 dolichyl-phosphate beta-D-mannosyltransferase
YP_780604.1	PFAM: glycosyl transferase, family 39; KEGG: rpc:RPC_1646 glycosyl transferase, family 39
YP_780605.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_1647 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_780606.1	PFAM: PfkB domain protein; KEGG: rpb:RPB_3654 PfkB
YP_780607.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpd:RPD_1806 glyoxalase/bleomycin resistance protein/dioxygenase
YP_780608.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_1649 transcriptional regulator, TetR family
YP_780609.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_1650 secretion protein HlyD
YP_780610.1	PFAM: acriflavin resistance protein; KEGG: rpc:RPC_1651 acriflavin resistance protein
YP_780611.1	PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_1652 D-amino-acid dehydrogenase
YP_780612.1	KEGG: rpc:RPC_1653 hypothetical protein
YP_780613.1	PFAM: PGAP1 family protein; KEGG: rpd:RPD_1818 hypothetical protein
YP_780614.1	TIGRFAM: phasin; KEGG: rpc:RPC_1658 phasin 2
YP_780616.1	PFAM: alpha/beta hydrolase fold; OsmC family protein; KEGG: rpc:RPC_1673 OsmC-like protein
YP_780617.1	PFAM: oxidoreductase, molybdopterin binding; KEGG: rpc:RPC_1672 oxidoreductase, molybdopterin binding
YP_780618.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rpc:RPC_1669 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_780619.1	KEGG: rpc:RPC_1668 amidase, hydantoinase/carbamoylase
YP_780620.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_1667 transcriptional regulator, LysR family
YP_780621.1	PFAM: protein of unknown function DUF1445; KEGG: rpc:RPC_1666 protein of unknown function DUF1445
YP_780622.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_1665 extracellular ligand-binding receptor
YP_780623.1	PFAM: inner-membrane translocator; KEGG: rpc:RPC_1664 inner-membrane translocator
YP_780624.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_1849 inner-membrane translocator
YP_780625.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1662 ABC transporter related
YP_780626.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1661 ABC transporter related
YP_780627.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: nha:Nham_0101 excinuclease ABC, C subunit-like
YP_780628.1	PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rpd:RPD_1855 hydroxypyruvate isomerase
YP_780629.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902
YP_780630.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_780631.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpd:RPD_1861 short-chain dehydrogenase/reductase SDR
YP_780632.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_780633.1	PFAM: aminoglycoside phosphotransferase; KEGG: rpd:RPD_1863 aminoglycoside phosphotransferase
YP_780634.1	KEGG: rpb:RPB_3603 hypothetical protein
YP_780635.1	PFAM: Redoxin domain protein; KEGG: rpc:RPC_4075 peroxiredoxin-like protein
YP_780636.1	activates fatty acids by binding to coenzyme A
YP_780637.1	PFAM: beta-lactamase; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: rpc:RPC_4073 serine-type D-Ala-D-Ala carboxypeptidase
YP_780638.1	responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA
YP_780639.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: rpc:RPC_4071 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_780640.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_780641.1	NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms
YP_780642.1	Catalyzes the transfer of electrons from NADH to quinone
YP_780643.1	PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rpc:RPC_4067 NADH dehydrogenase (quinone)
YP_780644.1	Catalyzes the transfer of electrons from NADH to quinone
YP_780645.1	PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: rpc:RPC_4065 respiratory-chain NADH dehydrogenase, subunit 1
YP_780646.1	Catalyzes the transfer of electrons from NADH to quinone
YP_780647.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: rpc:RPC_4063 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
YP_780648.1	PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: rpc:RPC_4062 NADH-ubiquinone oxidoreductase, chain 4L
YP_780649.1	KEGG: rpc:RPC_4061 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I)
YP_780650.1	KEGG: rpc:RPC_4060 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I)
YP_780651.1	PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rpc:RPC_4059 NADH dehydrogenase (quinone)
YP_780652.1	KEGG: rpb:RPB_1360 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_780653.1	transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes
YP_780654.1	PFAM: response regulator receiver; KEGG: rpc:RPC_4054 response regulator receiver domain protein (CheY-like)
YP_780655.1	response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes
YP_780656.1	KEGG: rpc:RPC_4052 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_780657.1	PFAM: CBS domain containing protein; transport-associated; KEGG: rpc:RPC_4051 putative signal-transduction protein with CBS domains
YP_780658.1	PFAM: UspA domain protein; KEGG: rpc:RPC_4050 UspA
YP_780659.1	PFAM: UspA domain protein; KEGG: rpc:RPC_4049 hypothetical protein
YP_780660.1	PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rpc:RPC_4048 poly-beta-hydroxybutyrate polymerase-like
YP_780661.1	KEGG: rpc:RPC_4047 hypothetical protein
YP_780662.1	PFAM: CBS domain containing protein; KEGG: rpc:RPC_4046 CBS domain containing membrane protein
YP_780663.1	PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: rpc:RPC_4045 GCN5-related N-acetyltransferase
YP_780664.1	KEGG: rpc:RPC_3181 hypothetical protein
YP_780665.1	KEGG: rpc:RPC_4044 hypothetical protein
YP_780666.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; protein of unknown function DUF140; KEGG: rpc:RPC_4043 protein of unknown function DUF140
YP_780667.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4042 ABC transporter related
YP_780668.1	PFAM: Mammalian cell entry related domain protein; KEGG: rpc:RPC_4041 mammalian cell entry related
YP_780669.1	PFAM: cytochrome c, class I; KEGG: rpc:RPC_4040 hypothetical protein
YP_780670.1	PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rpc:RPC_4039 transcriptional regulator, Crp/Fnr family
YP_780671.1	PFAM: cyclic nucleotide-binding; Ion transport protein; Ion transport 2 domain protein,; KEGG: rpc:RPC_4038 cyclic nucleotide-binding domain (cNMP-BD) protein
YP_780672.1	KEGG: rpa:RPA4230 hypothetical protein
YP_780673.1	KEGG: rpc:RPC_4034 hypothetical protein
YP_780674.1	KEGG: rpb:RPB_1383 hypothetical protein
YP_780675.1	TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: rpc:RPC_4032 urease accessory protein UreG
YP_780676.1	PFAM: HWE histidine kinase; KEGG: rpc:RPC_4031 signal transduction histidine kinase
YP_780677.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_780678.1	KEGG: rpc:RPC_4029 hypothetical protein
YP_780679.1	in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media
YP_780680.1	KEGG: rpb:RPB_1389 hypothetical protein
YP_780681.1	PFAM: protein of unknown function UPF0118; KEGG: rpc:RPC_4026 protein of unknown function UPF0118
YP_780682.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_4025 ErfK/YbiS/YcfS/YnhG
YP_780683.1	KEGG: rpc:RPC_4024 hypothetical protein
YP_780684.1	KEGG: rpa:RPA4218 hypothetical protein
YP_780685.1	catalyzes the formation of malate from glyoxylate and acetyl-CoA
YP_780686.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1396 sulfate ABC transporter, permease protein CysW
YP_780687.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_4019 sulfate ABC transporter, permease protein CysT
YP_780688.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rpd:RPD_1378 thiosulphate-binding protein
YP_780689.1	Adenylyl-sulfate kinase; PFAM: protein synthesis factor, GTP-binding; adenylylsulfate kinase; elongation factor Tu, domain 2 protein; KEGG: rpc:RPC_4017 sulfate adenylyltransferase, large subunit
YP_780690.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_780691.1	TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpc:RPC_4015 uroporphyrin-III C-methyltransferase
YP_780692.1	KEGG: rpc:RPC_4014 hypothetical protein
YP_780693.1	PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: rpc:RPC_4013 nitrite and sulphite reductase 4Fe-4S region
YP_780694.1	PFAM: Uncharacterised conserved protein UCP030820; KEGG: rpc:RPC_4012 uncharacterised conserved protein UCP030820
YP_780695.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
YP_780696.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_4010 thiosulphate-binding protein
YP_780697.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_4009 sulfate ABC transporter, permease protein CysT
YP_780698.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_4008 sulfate ABC transporter, permease protein CysW
YP_780699.1	KEGG: rpc:RPC_4007 sulphate transport system permease protein 1; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_780700.1	PFAM: Allergen V5/Tpx-1 family protein; KEGG: rpc:RPC_4004 allergen V5/TPX-1 related
YP_780701.1	TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_4002 3-hydroxybutyrate dehydrogenase
YP_780702.1	KEGG: ccr:CC2989 hypothetical protein
YP_780703.1	KEGG: ccr:CC0488 conserved hypothetical protein
YP_780704.1	PFAM: protein of unknown function DUF497; KEGG: syn:sll1651 hypothetical protein
YP_780706.1	PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rpa:RPA0992 probable transcriptional regulator, Crp/Fnr family
YP_780707.1	PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rpd:RPD_1719 peptidase C14, caspase catalytic subunit P20
YP_780708.1	activates fatty acids by binding to coenzyme A
YP_780709.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_3599 short-chain dehydrogenase/reductase SDR
YP_780710.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_780711.1	activates fatty acids by binding to coenzyme A
YP_780712.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_1679 transcriptional regulator, LysR family
YP_780713.1	PFAM: conserved hypothetical protein 698; KEGG: rpc:RPC_1680 conserved hypothetical protein 698
YP_780714.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rpc:RPC_1681 multi-sensor hybrid histidine kinase
YP_780715.1	KEGG: rpc:RPC_1682 hypothetical protein
YP_780716.1	PFAM: type IV pilus assembly PilZ; KEGG: rpd:RPD_2833 type IV pilus assembly PilZ
YP_780717.1	KEGG: bja:bll4192 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region
YP_780718.1	PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpd:RPD_0706 FAD dependent oxidoreductase
YP_780719.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
YP_780720.1	PFAM: OmpA/MotB domain protein; KEGG: rpb:RPB_3590 OmpA/MotB
YP_780721.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpd:RPD_1878 short-chain dehydrogenase/reductase SDR
YP_780722.1	KEGG: rpa:RPA1776 possible lipid transfer protein
YP_780723.1	PFAM: protein of unknown function DUF35; KEGG: bja:bll2959 hypothetical protein
YP_780724.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_780725.1	KEGG: rpd:RPD_1882 hypothetical protein
YP_780726.1	KEGG: bja:blr2964 hypothetical protein
YP_780727.1	KEGG: rpb:RPB_1412 hypothetical protein
YP_780728.1	KEGG: rpc:RPC_1692 hypothetical protein
YP_780729.1	PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rpd:RPD_3594 thiamine pyrophosphate enzyme-like TPP-binding
YP_780730.1	PFAM: HpcH/HpaI aldolase; KEGG: rpa:RPA3755 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
YP_780731.1	KEGG: rpc:RPC_1708 cache, type 2
YP_780732.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_1709 methyl-accepting chemotaxis sensory transducer
YP_780733.1	PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rpc:RPC_1711 ethanolamine ammonia lyase large subunit
YP_780734.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpc:RPC_1712 radical SAM
YP_780735.1	catalyzes the formation of acetaldehyde from ethanolamine
YP_780736.1	KEGG: rpc:RPC_1714 putative RND superfamily transporter
YP_780737.1	KEGG: rpc:RPC_1715 hypothetical protein
YP_780738.1	KEGG: rpc:RPC_1716 hypothetical protein
YP_780739.1	PFAM: Squalene/phytoene synthase; KEGG: rpc:RPC_1717 squalene/phytoene synthase
YP_780740.1	PFAM: Squalene/phytoene synthase; KEGG: rpc:RPC_1718 squalene/phytoene synthase
YP_780741.1	PFAM: amine oxidase; KEGG: rpc:RPC_1719 amine oxidase
YP_780742.1	PFAM: purine and other phosphorylases, family 1; KEGG: rpc:RPC_1721 hypothetical protein
YP_780743.1	PFAM: Radical SAM domain protein; KEGG: rpc:RPC_1725 radical SAM
YP_780744.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_780745.1	KEGG: rpc:RPC_1727 hypothetical protein
YP_780746.1	KEGG: bja:bll3009 hypothetical protein
YP_780747.1	PFAM: aminotransferase class-III; KEGG: rpc:RPC_1728 aminotransferase class-III
YP_780748.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rpb:RPB_1733 glucose-methanol-choline oxidoreductase
YP_780749.1	KEGG: rpc:RPC_1729 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_780750.1	PFAM: protein of unknown function DUF892; KEGG: rpc:RPC_1730 protein of unknown function DUF892
YP_780751.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rpd:RPD_1899 phage SPO1 DNA polymerase-related protein
YP_780752.1	PFAM: Radical SAM domain protein; KEGG: rpd:RPD_1900 radical SAM
YP_780753.1	KEGG: rpb:RPB_3565 hypothetical protein
YP_780754.1	KEGG: rpb:RPB_3564 hypothetical protein
YP_780755.1	DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.
YP_780756.1	PFAM: GCN5-related N-acetyltransferase; KEGG: nar:Saro_0459 GCN5-related N-acetyltransferase
YP_780757.1	KEGG: nmu:Nmul_A2382 PDZ/DHR/GLGF
YP_780758.1	TIGRFAM: putative addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: rru:Rru_A3537 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
YP_780759.1	KEGG: syn:slr0668 hypothetical protein
YP_780760.1	KEGG: syn:slr0667 hypothetical protein
YP_780762.1	KEGG: rpc:RPC_1734 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein
YP_780763.1	KEGG: rpc:RPC_1736 hypothetical protein
YP_780764.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_1738 enoyl-CoA hydratase/isomerase
YP_780765.1	KEGG: rpa:RPA1812 hypothetical protein
YP_780766.1	KEGG: rpc:RPC_1744 hypothetical protein
YP_780767.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_1745 diguanylate cyclase (GGDEF domain)
YP_780768.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_780769.1	KEGG: rpd:RPD_1916 hypothetical protein
YP_780770.1	KEGG: rpc:RPC_1747 hypothetical protein
YP_780771.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_1748 twin-arginine translocation pathway signal
YP_780772.1	KEGG: rpc:RPC_1752 hypothetical protein
YP_780773.1	PFAM: peptidase C15, pyroglutamyl peptidase I; KEGG: rpc:RPC_1753 peptidase C15, pyroglutamyl peptidase I
YP_780774.1	functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins
YP_780775.1	KEGG: rpc:RPC_1755 hypothetical protein
YP_780776.1	PFAM: protein of unknown function DUF86; KEGG: rpc:RPC_1756 protein of unknown function DUF86
YP_780777.1	PFAM: DNA polymerase, beta domain protein region; KEGG: rpc:RPC_1757 DNA polymerase, beta-like region
YP_780779.1	TIGRFAM: prevent-host-death family protein; KEGG: rpc:RPC_1759 prevent-host-death protein
YP_780780.1	MDM; functions in conversion of succinate to propionate
YP_780781.1	PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rpc:RPC_1761 glutathione-dependent formaldehyde-activating, GFA
YP_780782.1	PFAM: methylmalonyl-CoA mutase; KEGG: rpc:RPC_1762 methylmalonyl-CoA mutase
YP_780783.1	KEGG: rpc:RPC_1763 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
YP_780784.1	TIGRFAM: dihydroneopterin aldolase; KEGG: rpb:RPB_3534 dihydroneopterin aldolase
YP_780785.1	KEGG: rpc:RPC_1765 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS
YP_780786.1	KEGG: rpc:RPC_1766 hypothetical protein
YP_780787.1	KEGG: rpc:RPC_1767 hypothetical protein
YP_780788.1	PFAM: protein of unknown function DUF853, NPT hydrolase putative; KEGG: rpa:RPA1843 hypothetical protein
YP_780789.1	PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rpd:RPD_1937 peptidase M20
YP_780790.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_2457 methyl-accepting chemotaxis sensory transducer
YP_780791.1	PFAM: chemotaxis sensory transducer; KEGG: rpb:RPB_3522 methyl-accepting chemotaxis sensory transducer
YP_780792.1	KEGG: bja:bll3066 hypothetical protein
YP_780793.1	PFAM: beta-lactamase; KEGG: bja:bll0941 beta-lactamase L2 precursor
YP_780794.1	KEGG: rpc:RPC_1772 hypothetical protein
YP_780795.1	KEGG: rpc:RPC_1773 hypothetical protein
YP_780796.1	PFAM: ROSMUCR transcriptional regulator; KEGG: rpc:RPC_1774 transcriptional regulator, MucR family
YP_780797.1	KEGG: rpc:RPC_1776 hypothetical protein
YP_780798.1	PFAM: Fe-S metabolism associated SufE; KEGG: rpc:RPC_1777 Fe-S metabolism associated SufE
YP_780799.1	KEGG: rpc:RPC_1778 hypothetical protein
YP_780800.1	KEGG: rpc:RPC_1779 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein
YP_780801.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_1780 peptidoglycan-binding domain 1
YP_780802.1	PFAM: protein of unknown function DUF1491; KEGG: rpc:RPC_1781 protein of unknown function DUF1491
YP_780803.1	KEGG: rpc:RPC_1782 hypothetical protein
YP_780804.1	KEGG: rpc:RPC_1783 hypothetical protein
YP_780805.1	KEGG: rpc:RPC_1784 hypothetical protein
YP_780806.1	KEGG: rpc:RPC_1785 hypothetical protein
YP_780807.1	PFAM: protein of unknown function DUF1214; KEGG: rpc:RPC_1786 protein of unknown function DUF1214
YP_780808.1	KEGG: rpc:RPC_1787 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase
YP_780809.1	PFAM: protein of unknown function UPF0153; KEGG: bja:blr3103 hypothetical protein
YP_780810.1	PFAM: Flp/Fap pilin component; KEGG: rpc:RPC_1796 Flp/Fap pilin component
YP_780811.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_1795 methyl-accepting chemotaxis sensory transducer
YP_780812.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_3379 methyl-accepting chemotaxis sensory transducer
YP_780813.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_3380 methyl-accepting chemotaxis sensory transducer
YP_780815.1	PFAM: helix-turn-helix- domain containing protein, AraC type; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: rpc:RPC_1252 transcriptional regulator, AraC family
YP_780817.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_1795 methyl-accepting chemotaxis sensory transducer
YP_780819.1	KEGG: rpc:RPC_1798 hypothetical protein
YP_780820.1	KEGG: rpc:RPC_1799 hypothetical protein
YP_780821.1	PFAM: protein of unknown function DUF264; KEGG: rpc:RPC_1800 protein of unknown function DUF264
YP_780822.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpd:RPD_1965 excinuclease ABC, C subunit-like
YP_780823.1	TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: rpc:RPC_1801 phage portal protein, HK97
YP_780824.1	PFAM: type IV pilus assembly PilZ; KEGG: rpc:RPC_1802 type IV pilus assembly PilZ
YP_780825.1	KEGG: rpc:RPC_1803 hypothetical protein
YP_780826.1	TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35, phage prohead HK97; KEGG: rpb:RPB_3484 peptidase U35, phage prohead HK97
YP_780828.1	PFAM: transposase, IS4 family protein; KEGG: rpc:RPC_2070 transposase, IS4
YP_780829.1	KEGG: rpb:RPB_3488 hypothetical protein
YP_780831.1	KEGG: rpb:RPB_3482 hypothetical protein
YP_780832.1	TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: nwi:Nwi_1167 phage major capsid protein, HK97
YP_780834.1	KEGG: nwi:Nwi_1168 hypothetical protein
YP_780835.1	KEGG: rpc:RPC_1809 hypothetical protein
YP_780836.1	KEGG: rpc:RPC_1810 hypothetical protein
YP_780837.1	PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: rpc:RPC_1812 peptidase S1 and S6, chymotrypsin/Hap
YP_780838.1	TIGRFAM: phiE125 gp8 family; KEGG: rpc:RPC_1813 phage conserved hypothetical protein, phiE125 gp8
YP_780839.1	TIGRFAM: phage head-tail adaptor, putative; KEGG: rpd:RPD_1981 hypothetical protein
YP_780840.1	KEGG: rpc:RPC_1815 gene transfer agent (GTA) orfg8
YP_780841.1	TIGRFAM: phage major tail protein, TP901-1 family; KEGG: rpc:RPC_1816 phage major tail protein, TP901-1
YP_780842.1	KEGG: nha:Nham_1420 gene transfer agent (GTA) like protein
YP_780843.1	KEGG: rpc:RPC_1819 hypothetical protein
YP_780844.1	KEGG: rpc:RPC_1820 gene transfer agent (GTA) like protein
YP_780845.1	TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_1821 hypothetical protein
YP_780846.1	KEGG: rpd:RPD_1991 phage conserved hypothetical protein BR0599
YP_780847.1	TIGRFAM: putative phage cell wall peptidase, NlpC/P60 family; PFAM: NLP/P60 protein; KEGG: rpc:RPC_1823 putative phage cell wall peptidase, NlpC/P60
YP_780848.1	KEGG: rpc:RPC_1824 gene transfer agent (GTA) orfg15
YP_780849.1	KEGG: rpc:RPC_1825 hypothetical protein
YP_780850.1	KEGG: rpc:RPC_1828 putative glycohydrolase
YP_780851.1	KEGG: rpc:RPC_1829 hypothetical protein
YP_780852.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_1830 two component transcriptional regulator, winged helix family
YP_780853.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_1831 periplasmic sensor signal transduction histidine kinase
YP_780854.1	KEGG: rpc:RPC_1832 LipA a lipoprotein
YP_780855.1	KEGG: rpc:RPC_1833 hypothetical protein
YP_780856.1	KEGG: rpc:RPC_1834 tetratricopeptide TPR_2
YP_780857.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane
YP_780858.1	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rpc:RPC_1836 cytochrome c-type biogenesis protein CcmF
YP_780859.1	PFAM: cytochrome C biogenesis protein; KEGG: rpa:RPA1922 CycL cytochrome C-type biogenesis protein
YP_780860.1	PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rpc:RPC_3502 cobalamin synthesis protein, P47K
YP_780861.1	KEGG: rpc:RPC_1839 hypothetical protein
YP_780862.1	PFAM: ferredoxin; KEGG: rpc:RPC_1840 ferredoxin
YP_780863.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_1841 peptidase S1C, Do
YP_780864.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpb:RPB_3442 two component transcriptional regulator, winged helix family
YP_780865.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_1843 methyl-accepting chemotaxis sensory transducer
YP_780866.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_1844 diguanylate cyclase (GGDEF domain)
YP_780867.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_1845 periplasmic sensor signal transduction histidine kinase
YP_780868.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
YP_780869.1	PFAM: protein of unknown function DUF1109; KEGG: sme:SMb20532 hypothetical protein
YP_780870.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_780871.1	KEGG: sme:SMb20530 hypothetical protein
YP_780872.1	PFAM: protein of unknown function DUF692; KEGG: sme:SMb20529 hypothetical protein
YP_780873.1	KEGG: bps:BPSL1690 hypothetical protein
YP_780874.1	PFAM: DoxX family protein; KEGG: sme:SMb20527 hypothetical protein
YP_780875.1	KEGG: rpc:RPC_1847 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein
YP_780876.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpd:RPD_2019 cation diffusion facilitator family transporter
YP_780877.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpd:RPD_2022 5-carboxymethyl-2-hydroxymuconate delta-isomerase
YP_780878.1	ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis
YP_780879.1	PFAM: protein of unknown function DUF112, transmembrane; KEGG: rpc:RPC_1851 protein of unknown function DUF112, transmembrane
YP_780880.1	KEGG: rpc:RPC_1852 hypothetical protein
YP_780881.1	PFAM: Uncharacterized protein UPF0065; KEGG: rpb:RPB_3428 uncharacterized protein UPF0065
YP_780882.1	catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA
YP_780883.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rpd:RPD_2028 GntR-like
YP_780884.1	PFAM: K+ potassium transporter; KEGG: rpc:RPC_1856 K+ potassium transporter
YP_780885.1	KEGG: rpc:RPC_4314 hypothetical protein
YP_780886.1	KEGG: rpc:RPC_4313 hypothetical protein
YP_780887.1	KEGG: rpc:RPC_4312 hypothetical protein
YP_780888.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4311 two component transcriptional regulator, winged helix family
YP_780889.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_4310 periplasmic sensor signal transduction histidine kinase
YP_780890.1	KEGG: rpb:RPB_4310 hypothetical protein
YP_780891.1	PFAM: histone family protein DNA-binding protein; KEGG: bja:blr4404 histone-like protein
YP_780892.1	TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rpc:RPC_1949 cobalt ABC transporter CbiQ, permease subunit
YP_780893.1	KEGG: rpc:RPC_1950 hypothetical protein
YP_780894.1	catalyzes the ATP-dependent transport of cobalt
YP_780895.1	KEGG: rpc:RPC_1952 ABC-type Co2+ transport system, periplasmic component
YP_780896.1	Inhibits transcription at high concentrations of nickel
YP_780898.1	KEGG: sme:SMa1198 possible copper export protein
YP_780899.1	KEGG: rpa:RPA2316 enoyl-CoA hydratase
YP_780900.1	TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: rpc:RPC_2060 TIM-barrel protein, YjbN family
YP_780901.1	TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_2062 hypothetical protein
YP_780902.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_2064 periplasmic sensor signal transduction histidine kinase
YP_780903.1	PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rpa:RPA1973 3-hydroxyisobutyrate dehydrogenase
YP_780904.1	KEGG: rpb:RPB_3393 MRP-like protein (ATP/GTP-binding protein)
YP_780905.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpc:RPC_2067 twin-arginine translocation pathway signal
YP_780906.1	PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpc:RPC_2071 TRAP dicarboxylate transporter-DctM subunit
YP_780907.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rpc:RPC_2072 tripartite ATP-independent periplasmic transporter, DctQ component
YP_780908.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_780909.1	KEGG: rpc:RPC_2074 hypothetical protein
YP_780910.1	KEGG: rpc:RPC_2075 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_780911.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_780912.1	KEGG: rpc:RPC_2077 hypothetical protein
YP_780913.1	TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rpc:RPC_2078 glutathione reductase
YP_780914.1	KEGG: rpc:RPC_2079 hypothetical protein
YP_780915.1	KEGG: rpc:RPC_2080 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II
YP_780916.1	PFAM: diacylglycerol kinase; KEGG: rpc:RPC_2081 diacylglycerol kinase
YP_780917.1	NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_780918.1	PFAM: PilT protein domain protein; KEGG: rpa:RPA1992 possible NtrR protein
YP_780919.1	PFAM: SpoVT/AbrB domain protein; KEGG: rpd:RPD_2062 SpoVT/AbrB-like
YP_780920.1	KEGG: rpc:RPC_2084 hypothetical protein
YP_780921.1	KEGG: rpc:RPC_2085 hypothetical protein
YP_780922.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_780923.1	KEGG: rpd:RPD_2066 hypothetical protein
YP_780924.1	KEGG: rpa:RPA1998 hypothetical protein
YP_780925.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_2088 GCN5-related N-acetyltransferase
YP_780926.1	TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rpc:RPC_2089 2-isopropylmalate synthase/homocitrate synthase
YP_780927.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr3793 putative lyase
YP_780928.1	thiamine-pyrophosphate requiring enzyme
YP_780929.1	PFAM: FAD linked oxidase domain protein; KEGG: rpd:RPD_2071 FAD linked oxidase-like
YP_780930.1	PFAM: conserved hypothetical protein 730; KEGG: rpc:RPC_2093 conserved hypothetical protein 730
YP_780931.1	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_2094 ABC transporter related
YP_780932.1	catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine
YP_780933.1	KEGG: rpc:RPC_2096 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; outer membrane TOM13 domain protein
YP_780934.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpc:RPC_2100 MotA/TolQ/ExbB proton channel
YP_780935.1	PFAM: OmpA/MotB domain protein; KEGG: rpc:RPC_2101 OmpA/MotB
YP_780936.1	PFAM: K+ potassium transporter; KEGG: rpc:RPC_2102 K+ potassium transporter
YP_780937.1	SMART: Rhodanese domain protein; KEGG: rpd:RPD_2080 rhodanese-like
YP_780938.1	PFAM: aminotransferase, class V; aminotransferase, class I and II; KEGG: rpc:RPC_2104 aminotransferase, class I and II
YP_780939.1	PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_2105 extracellular solute-binding protein, family 1
YP_780941.1	KEGG: rpa:RPA4003 hypothetical protein
YP_780942.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
YP_780943.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_2107 alcohol dehydrogenase, zinc-binding
YP_780944.1	FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.
YP_780945.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_780946.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: rpc:RPC_2110 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_780947.2	Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides
YP_780948.1	KEGG: rpc:RPC_2112 hypothetical protein
YP_780949.1	PFAM: MgtC/SapB transporter; KEGG: rpc:RPC_2114 MgtC/SapB transporter
YP_780950.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rpc:RPC_2115 uncharacterised peroxidase-related
YP_780951.1	PFAM: protein of unknown function DUF87; KEGG: rpc:RPC_2116 protein of unknown function DUF87
YP_780952.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rpb:RPB_1903 gluconolactonase precursor
YP_780953.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpb:RPB_1904 GCN5-related N-acetyltransferase
YP_780954.1	KEGG: rpa:RPA3622 hypothetical protein
YP_780955.1	PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_2122 ATPase associated with various cellular activities, AAA_5
YP_780956.1	KEGG: rpd:RPD_3460 GGDEF domain; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_780957.1	KEGG: rpb:RPB_1913 hypothetical protein
YP_780958.1	SMART: Rhodanese domain protein; KEGG: rpd:RPD_3458 rhodanese-like
YP_780959.1	PFAM: Rhodanese domain protein; KEGG: rpa:RPA3613 putative thiosulfate sulfurtransferase
YP_780960.1	KEGG: rpa:RPA3612 hypothetical protein
YP_780961.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_2129 ErfK/YbiS/YcfS/YnhG
YP_780962.1	KEGG: rpc:RPC_2130 hypothetical protein
YP_780963.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_780964.1	KEGG: rpc:RPC_2132 PilT protein-like
YP_780965.1	TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: rpc:RPC_2133 transcriptional regulator, AbrB family
YP_780966.1	KEGG: nwi:Nwi_2484 hypothetical protein
YP_780967.1	PFAM: protein of unknown function DUF497; KEGG: rpc:RPC_2135 protein of unknown function DUF497
YP_780968.1	catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate
YP_780969.1	PFAM: Uncharacterized protein UPF0114; KEGG: rpc:RPC_2137 uncharacterized protein UPF0114
YP_780970.1	KEGG: rpc:RPC_2138 hypothetical protein
YP_780971.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_2140 lytic murein transglycosylase
YP_780972.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1925 phosphonate uptake transporter
YP_780973.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1926 phosphonate uptake transporter
YP_780974.1	KEGG: rpb:RPB_1927 phosphonate ABC transporter PhnC, ATP-binding; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_780975.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rpb:RPB_1928 phosphonate-binding periplasmic protein
YP_780976.1	KEGG: rpd:RPD_3448 hypothetical protein
YP_780977.1	KEGG: rpc:RPC_2142 hypothetical protein
YP_780978.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rpc:RPC_2143 BFD-like (2Fe-2S)-binding region
YP_780979.1	TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: rpc:RPC_2144 bacterioferritin
YP_780980.1	PFAM: chemotaxis sensory transducer; KEGG: rpc:RPC_2149 methyl-accepting chemotaxis sensory transducer
YP_780981.1	KEGG: rpc:RPC_2150 membrane protein-like
YP_780982.1	KEGG: rpc:RPC_2153 hypothetical protein
YP_780983.1	KEGG: rpc:RPC_2154 hypothetical protein
YP_780984.1	KEGG: bja:bll5279 hypothetical protein
YP_780985.1	KEGG: rpd:RPD_3434 hypothetical protein
YP_780986.1	TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PFAM: GGDEF domain containing protein; Hemerythrin HHE cation binding domain protein; KEGG: rpa:RPA1642 putative diguanylate cyclase (GGDEF)
YP_780987.1	KEGG: rpc:RPC_2159 hypothetical protein
YP_780988.1	KEGG: noc:Noc_1857 hypothetical protein
YP_780989.1	KEGG: rpb:RPB_1951 hypothetical protein
YP_780990.1	PFAM: protein of unknown function DUF1568; KEGG: rpb:RPB_1952 protein of unknown function DUF1568
YP_780993.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_780994.1	PFAM: thiamine monophosphate synthase; KEGG: rpb:RPB_1955 thiamine-phosphate pyrophosphorylase
YP_780995.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_780996.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: rpb:RPB_1957 thiamine biosynthesis protein ThiS
YP_780997.1	PFAM: FAD dependent oxidoreductase; KEGG: rpd:RPD_3428 glycine oxidase ThiO
YP_780998.1	PFAM: PRC-barrel domain protein; KEGG: rpc:RPC_2167 PRC-barrel
YP_780999.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_2168 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_781000.1	KEGG: rpc:RPC_2169 hypothetical protein
YP_781001.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_2170 twin-arginine translocation pathway signal
YP_781002.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpd:RPD_3424 ErfK/YbiS/YcfS/YnhG
YP_781003.1	KEGG: rpc:RPC_2174 hypothetical protein
YP_781004.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bja:bll5570 hypothetical protein
YP_781005.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_4895 transcriptional regulator, LysR family
YP_781006.1	PFAM: aldo/keto reductase; KEGG: rpc:RPC_4894 aldo/keto reductase
YP_781007.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_4893 alcohol dehydrogenase GroES-like
YP_781008.1	PFAM: regulatory protein, MarR; KEGG: rpc:RPC_2962 transcriptional regulator, MarR family
YP_781009.1	KEGG: rpd:RPD_3089 hypothetical protein
YP_781010.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: bja:blr4813 hypothetical protein
YP_781011.1	KEGG: rpb:RPB_2455 hypothetical protein
YP_781012.1	KEGG: rpb:RPB_3274 hypothetical protein
YP_781013.1	KEGG: rpc:RPC_2177 hypothetical protein
YP_781014.1	PFAM: Extensin family protein; KEGG: rpc:RPC_2178 extensin-like
YP_781015.1	PFAM: regulatory protein, TetR; KEGG: rpa:RPA3544 transcriptional regulator, TetR family
YP_781016.1	PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_2180 secretion protein HlyD
YP_781017.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_2181 drug resistance transporter EmrB/QacA subfamily
YP_781019.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpc:RPC_4299 TonB-dependent receptor
YP_781020.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bja:bll2645 hypothetical protein
YP_781021.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: ade:Adeh_2267 transcriptional regulator, AraC family
YP_781022.1	PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: rpc:RPC_2185 negative regulator of AmpC, AmpD
YP_781023.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rpc:RPC_2186 methyltransferase
YP_781024.1	KEGG: rpc:RPC_2187 hypothetical protein
YP_781025.1	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: rpc:RPC_2188 peptidoglycan glycosyltransferase
YP_781026.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_781027.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rpc:RPC_2190 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase
YP_781028.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_781029.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_781030.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: rpc:RPC_3307 cell cycle protein
YP_781031.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_781032.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_781033.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: nwi:Nwi_1053 excinuclease ABC, C subunit
YP_781034.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_781035.1	KEGG: rpb:RPB_1999 hypothetical protein
YP_781036.1	PFAM: glycosyl transferase, group 1; KEGG: rpc:RPC_3302 glycosyl transferase, group 1
YP_781037.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_781038.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: rpc:RPC_3300 cell division protein FtsQ
YP_781039.1	PFAM: cell division protein FtsA; KEGG: rpc:RPC_3299 cell division protein FtsA
YP_781040.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_781041.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_781042.1	KEGG: rpc:RPC_3296 putative lipoprotein
YP_781043.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rpc:RPC_3295 DNA repair protein RecN
YP_781044.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpd:RPD_3382 excinuclease ABC, C subunit-like
YP_781045.1	KEGG: rpb:RPB_2008 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold
YP_781046.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3292 drug resistance transporter Bcr/CflA subfamily
YP_781047.1	PFAM: peptidase M24; KEGG: rpc:RPC_3291 peptidase M24
YP_781048.1	KEGG: rpd:RPD_3378 hypothetical protein
YP_781049.1	PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: rpc:RPC_3290 ribosomal L11 methyltransferase
YP_781050.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: rpc:RPC_3396 filamentation induced by cAMP protein Fic
YP_781051.1	PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_3288 FAD dependent oxidoreductase
YP_781052.1	KEGG: rpc:RPC_3287 hypothetical protein
YP_781053.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_3286 ErfK/YbiS/YcfS/YnhG
YP_781054.1	KEGG: rpc:RPC_3285 hypothetical protein
YP_781055.1	PFAM: ABC-2 type transporter; KEGG: rpc:RPC_3284 ABC-2
YP_781056.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_3283 ABC transporter related
YP_781057.1	KEGG: rpc:RPC_3282 hypothetical protein
YP_781058.1	PFAM: protein of unknown function UPF0150; KEGG: rpc:RPC_3281 protein of unknown function UPF0150
YP_781059.1	PFAM: protein of unknown function UPF0150; KEGG: rpc:RPC_3280 protein of unknown function UPF0150
YP_781060.1	PFAM: YcfA family protein; KEGG: rpb:RPB_2021 YcfA-like
YP_781061.1	PFAM: UvrD/REP helicase; KEGG: rpb:RPB_2023 UvrD/REP helicase
YP_781062.1	PFAM: protein of unknown function DUF1328; KEGG: bja:bsl6560 hypothetical protein
YP_781063.1	KEGG: rpc:RPC_3277 hypothetical protein
YP_781064.1	PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_3276 FAD linked oxidase-like
YP_781065.1	PFAM: AsmA family protein; KEGG: rpc:RPC_3274 AsmA
YP_781066.1	KEGG: rpc:RPC_3273 hypothetical protein
YP_781067.1	KEGG: rpc:RPC_3272 hypothetical protein
YP_781068.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_781069.1	PFAM: protein of unknown function DUF1321; KEGG: rpc:RPC_3270 protein of unknown function DUF1321
YP_781070.1	PFAM: protein of unknown function DUF1468; KEGG: rpb:RPB_2033 TctB subunit of the tripartite tricarboxylate transport(TTT) family
YP_781071.1	PFAM: protein of unknown function DUF112, transmembrane; KEGG: rpc:RPC_3268 protein of unknown function DUF112, transmembrane
YP_781072.1	PFAM: Uncharacterized protein UPF0065; KEGG: rpd:RPD_3356 uncharacterized protein UPF0065
YP_781073.1	PFAM: thymidylate synthase; KEGG: rpc:RPC_3266 thymidylate synthase
YP_781074.1	PFAM: thymidylate synthase; KEGG: rsp:RSP_0390 thymidylate synthase
YP_781075.1	KEGG: rpb:RPB_3835 hypothetical protein
YP_781077.1	KEGG: bja:bll5745 hypothetical protein
YP_781078.1	KEGG: rpd:RPD_0005 hypothetical protein
YP_781080.1	KEGG: rpd:RPD_0009 hypothetical protein
YP_781086.1	PFAM: phage integrase domain protein SAM domain protein
YP_781088.1	PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD/DEAH box helicase domain protein; KEGG: noc:Noc_0063 type III restriction enzyme, res subunit
YP_781090.1	KEGG: mca:MCA0729 hypothetical protein
YP_781091.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ava:Ava_3253 DEAD/DEAH box helicase-like
YP_781092.1	PFAM: sigma-70 region 2 domain protein
YP_781093.1	KEGG: ava:Ava_B0306 hypothetical protein
YP_781094.1	KEGG: ava:Ava_B0306 hypothetical protein
YP_781095.1	KEGG: tth:TTC1428 hypothetical protein
YP_781096.1	PFAM: peptidase M41; AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: mag:amb1687 ATP-dependent Zn protease
YP_781098.1	PFAM: thymidylate synthase; KEGG: rpa:RPA3493 thymidylate synthase
YP_781099.1	KEGG: rpc:RPC_3265 hypothetical protein
YP_781101.1	PFAM: dihydrofolate reductase region; KEGG: rpc:RPC_3263 dihydrofolate reductase
YP_781102.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: rpc:RPC_3262 HflK protein
YP_781103.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: rpc:RPC_3261 HflC protein
YP_781104.1	KEGG: rpc:RPC_3260 hypothetical protein
YP_781105.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_3259 peptidase S1C, Do
YP_781106.1	PFAM: transposase, IS4 family protein; KEGG: rpc:RPC_2070 transposase, IS4
YP_781107.1	KEGG: rpc:RPC_3258 hypothetical protein
YP_781108.1	KEGG: rpa:RPA2267 hypothetical protein
YP_781109.1	KEGG: rpb:RPB_3347 phosphoserine phosphatase SerB:HAD-superfamily hydrolase subfamily IB, PSPase-like; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase
YP_781110.1	KEGG: rpa:RPA2030 tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase
YP_781111.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rpa:RPA2031 acetolactate synthase (large subunit)
YP_781112.1	PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rpc:RPC_3254 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_781113.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_781114.1	KEGG: rpc:RPC_3252 putative AtsE
YP_781115.1	PFAM: SpoVT/AbrB domain protein; KEGG: rpc:RPC_3251 transcriptional regulator/antitoxin, MazE
YP_781116.1	PFAM: PemK family protein; KEGG: gka:GK1648 ppGpp-regulated growth inhibitor (ChpA/MazF)
YP_781117.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_781118.1	PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bja:bll7569 probable O-methyltransferase
YP_781119.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_3247 short-chain dehydrogenase/reductase SDR
YP_781120.1	PFAM: sulfatase; KEGG: rpc:RPC_3246 sulfatase
YP_781121.1	KEGG: rpc:RPC_3245 hypothetical protein
YP_781122.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2421 MFS permease
YP_781123.1	PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rpc:RPC_3244 substrate-binding region of ABC-type glycine betaine transport system
YP_781124.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2105 ABC transporter related
YP_781125.1	KEGG: tbd:Tbd_0449 hypothetical protein
YP_781127.1	KEGG: bja:bll6480 hypothetical protein
YP_781128.1	PFAM: protein of unknown function DUF344; KEGG: rpc:RPC_3238 protein of unknown function DUF344
YP_781129.1	PFAM: SpoVT/AbrB domain protein; KEGG: nmu:Nmul_A0985 transcriptional regulator/antitoxin, MazE
YP_781130.1	KEGG: rpd:RPD_2111 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_781131.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_781132.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpa:RPA2047 TrapT family, DctP subunit, C4-dicarboxylate periplasmic binding protein
YP_781133.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rpd:RPD_2114 tripartite ATP-independent periplasmic transporter, DctQ component
YP_781134.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpd:RPD_2115 TRAP dicarboxylate transporter-DctM subunit
YP_781135.1	KEGG: rpa:RPA2050 hypothetical protein
YP_781137.1	PFAM: glycosyl transferase, family 28; KEGG: sth:STH2411 UDP-glucose:sterol glucosyltransferase
YP_781138.1	KEGG: rpd:RPD_0918 hypothetical protein
YP_781139.1	catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1
YP_781140.1	responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid
YP_781141.1	KEGG: rpd:RPD_2314 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
YP_781142.1	KEGG: rpa:RPA2085 cobalamin biosynthesis protein G; CbiG
YP_781143.1	KEGG: rpb:RPB_3182 precorrin-6y C5,15-methyltransferase, subunit CbiE; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Methyltransferase type 12
YP_781144.1	CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6
YP_781145.1	TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpc:RPC_1886 precorrin-3B C17-methyltransferase
YP_781146.1	TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpc:RPC_1887 precorrin-2 C20-methyltransferase
YP_781147.1	catalyzes the interconversion of precorrin-8X and hydrogenobyrinate
YP_781148.1	KEGG: rpc:RPC_1889 cobaltochelatase, CobN subunit
YP_781149.1	TIGRFAM: CitB domain protein; KEGG: rpc:RPC_1892 citrate utilization protein B
YP_781150.1	catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica
YP_781151.1	PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: rpb:RPB_3282 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_781152.1	catalyzes the formation of precorrin 6x from precorrin 5
YP_781153.1	KEGG: rru:Rru_A0458 hypothetical protein
YP_781154.1	KEGG: rpd:RPD_0641 Cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase
YP_781155.1	PFAM: protein of unknown function DUF1636; KEGG: rpb:RPB_0741 protein of unknown function DUF1636
YP_781156.1	PFAM: cobalbumin biosynthesis enzyme; KEGG: rpc:RPC_3747 cobalbumin biosynthesis enzyme
YP_781157.1	TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rpd:RPD_0637 cobalamin (vitamin B12) biosynthesis CobW
YP_781158.1	with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism
YP_781159.1	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide
YP_781160.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_781161.1	TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: rpc:RPC_3744 cobalamin biosynthesis protein CobD
YP_781162.1	PFAM: aminotransferase, class I and II; KEGG: rpc:RPC_3743 aminotransferase, class I and II
YP_781164.1	KEGG: rpc:RPC_3217 hypothetical protein
YP_781165.1	KEGG: rpc:RPC_3216 hypothetical protein
YP_781166.1	KEGG: rpb:RPB_2180 hypothetical protein
YP_781167.1	KEGG: rpc:RPC_3214 hypothetical protein
YP_781168.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_3208 periplasmic sensor hybrid histidine kinase
YP_781169.1	KEGG: rpc:RPC_3207 putative cytochrome c precursor
YP_781170.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_3267 acyl-CoA dehydrogenase-like
YP_781171.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_3266 acyl-CoA dehydrogenase-like
YP_781172.1	PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rpd:RPD_2200 glutathione S-transferase-like
YP_781173.1	SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: rpc:RPC_3204 transcriptional regulator, AraC family
YP_781174.1	PFAM: protein of unknown function DUF849; KEGG: rpa:RPA2141 hypothetical protein
YP_781175.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_3261 AMP-dependent synthetase and ligase
YP_781176.1	PFAM: carboxyl transferase; KEGG: rpc:RPC_3201 propionyl-CoA carboxylase
YP_781177.1	PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rpd:RPD_2205 carbamoyl-phosphate synthase L chain, ATP-binding
YP_781178.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_781179.1	KEGG: rpd:RPD_2208 hypothetical protein
YP_781180.1	PFAM: beta-lactamase; KEGG: rpa:RPA2148 beta-lactamase
YP_781181.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_3194 protein of unknown function DUF6, transmembrane
YP_781182.1	PFAM: aldehyde dehydrogenase; KEGG: rpd:RPD_2215 aldehyde dehydrogenase
YP_781183.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_781184.1	KEGG: rpc:RPC_3190 hypothetical protein
YP_781185.1	KEGG: rpa:RPA2158 hypothetical protein
YP_781186.1	KEGG: rpc:RPC_3188 hypothetical protein
YP_781188.1	KEGG: rpc:RPC_0609 hypothetical protein
YP_781189.1	KEGG: rpd:RPD_2221 hypothetical protein
YP_781190.1	KEGG: pcr:Pcryo_2512 hypothetical protein
YP_781191.1	KEGG: sth:STH2171 hypothetical protein
YP_781192.1	KEGG: rpc:RPC_1244 hypothetical protein
YP_781193.1	PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpd:RPD_2222 short-chain dehydrogenase/reductase SDR
YP_781194.1	PFAM: regulatory protein, ArsR; KEGG: rpd:RPD_2223 regulatory protein, ArsR
YP_781196.1	PFAM: regulatory protein, ArsR; KEGG: rpd:RPD_2223 regulatory protein, ArsR
YP_781197.1	PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rpc:RPC_3182 peptidase C14, caspase catalytic subunit P20
YP_781198.1	PFAM: regulatory protein, MarR; KEGG: rpc:RPC_3178 transcriptional regulator, MarR family
YP_781199.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_3177 alpha/beta hydrolase fold
YP_781200.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_3176 alpha/beta hydrolase fold
YP_781201.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpc:RPC_3180 excinuclease ABC, C subunit-like
YP_781202.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_2940 methyltransferase type 11
YP_781203.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpc:RPC_3180 excinuclease ABC, C subunit-like
YP_781204.1	TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: rpd:RPD_2224 YgfB and YecA
YP_781205.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is co-regulated with symbiotic nitrogen fixation genes
YP_781206.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_781207.1	PFAM: Usg family protein; KEGG: rpb:RPB_3232 hypothetical protein
YP_781208.1	KEGG: rpd:RPD_2230 hypothetical protein
YP_781209.1	KEGG: rpc:RPC_3168 hypothetical protein
YP_781210.1	PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: rpc:RPC_3167 Na+ dependent nucleoside transporter-like
YP_781211.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_3798 multi-sensor hybrid histidine kinase
YP_781212.1	PFAM: acyltransferase 3; KEGG: bja:bll7034 MDO-like protein
YP_781213.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_3165 short-chain dehydrogenase/reductase SDR
YP_781214.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902
YP_781215.1	KEGG: rpc:RPC_3163 putative proteasome-type protease
YP_781216.1	PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rpc:RPC_3159 transglutaminase-like
YP_781217.1	PFAM: protein of unknown function DUF403; KEGG: rpc:RPC_3158 protein of unknown function DUF403
YP_781218.1	PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rpc:RPC_3157 protein of unknown function DUF404
YP_781219.1	PFAM: molybdopterin binding domain; KEGG: rpc:RPC_3156 molybdopterin binding domain
YP_781220.1	catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively
YP_781221.1	KEGG: rpd:RPD_2244 hypothetical protein
YP_781222.1	catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate
YP_781223.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rpa:RPA2182 putative glutathione S-transferase
YP_781224.1	PFAM: DSBA oxidoreductase; KEGG: rpb:RPB_3208 DsbA oxidoreductase
YP_781225.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpd:RPD_2248 alcohol dehydrogenase, zinc-binding
YP_781226.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_781227.1	KEGG: rpc:RPC_3150 hypothetical protein
YP_781228.1	PFAM: monooxygenase, FAD-binding; KEGG: rpc:RPC_3149 monooxygenase, FAD-binding
YP_781229.1	KEGG: rpc:RPC_3148 hypothetical protein
YP_781230.1	KEGG: rpc:RPC_3147 hypothetical protein
YP_781231.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_3146 alpha/beta hydrolase fold
YP_781232.1	KEGG: rpc:RPC_3145 hypothetical protein
YP_781233.1	KEGG: rpc:RPC_3144 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein
YP_781234.1	KEGG: rpd:RPD_3287 hypothetical protein
YP_781235.1	KEGG: rpc:RPC_3142 hypothetical protein
YP_781236.1	KEGG: nwi:Nwi_2173 hypothetical protein
YP_781237.1	KEGG: rpc:RPC_3140 hypothetical protein
YP_781238.1	KEGG: rpc:RPC_3139 hypothetical protein
YP_781239.1	KEGG: bja:blr5580 hypothetical protein
YP_781240.1	PFAM: porin; KEGG: rpc:RPC_2891 putative Omp2b porin
YP_781241.1	PFAM: regulatory protein, MarR; KEGG: rpc:RPC_3135 transcriptional regulator, MarR family
YP_781244.1	PFAM: autoinducer synthesis protein; KEGG: bja:blr1063 putative autoinducer synthase
YP_781245.1	PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; KEGG: bja:blr1062 transcriptional regulatory protein
YP_781246.1	PFAM: transglutaminase family protein cysteine peptidase, BTLCP; KEGG: rpc:RPC_3134 transglutaminase-like cysteine peptidase, BTLCP
YP_781247.1	PFAM: type IV pilus assembly PilZ; KEGG: rpc:RPC_3133 type IV pilus assembly PilZ
YP_781248.1	PFAM: cyclic nucleotide-binding; KEGG: rpc:RPC_3375 cyclic nucleotide-binding domain (cNMP-BD) protein
YP_781249.1	KEGG: nha:Nham_1646 hypothetical protein
YP_781250.1	PFAM: Rhomboid family protein; KEGG: rpc:RPC_3129 rhomboid-like protein
YP_781251.1	PFAM: CBS domain containing protein; KEGG: rpc:RPC_3128 putative signal-transduction protein with CBS domains
YP_781252.1	PFAM: Patatin; KEGG: rpc:RPC_3127 patatin
YP_781253.1	KEGG: rpc:RPC_3126 hypothetical protein
YP_781254.1	KEGG: rpc:RPC_3125 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_781255.1	PFAM: nitroreductase; KEGG: bja:blr5540 hypothetical protein
YP_781256.1	KEGG: rpc:RPC_3122 hypothetical protein
YP_781257.1	catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)
YP_781259.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll5536 major facilitator superfamily transporter
YP_781260.1	PFAM: O-methyltransferase, family 3; KEGG: rpa:RPA3404 putative O-methyltransferase
YP_781261.1	PFAM: regulatory protein, TetR; KEGG: rpa:RPA3403 possible transcriptional regulator, TetR family
YP_781262.1	KEGG: rpa:RPA3402 hypothetical protein
YP_781263.1	PFAM: protein of unknown function DUF37; KEGG: rpc:RPC_3117 protein of unknown function DUF37
YP_781264.1	KEGG: rpc:RPC_3116 hypothetical protein
YP_781265.1	KEGG: gvi:glr0057 unknown protein
YP_781267.1	PFAM: nitrogen-fixing NifU domain protein; KEGG: rpc:RPC_3115 nitrogen-fixing NifU-like
YP_781268.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_781269.1	PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers
YP_781270.1	PFAM: cytochrome b5; KEGG: rpc:RPC_1930 cytochrome b5
YP_781271.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: rpc:RPC_1929 ferric reductase-like transmembrane component-like
YP_781272.1	KEGG: rpc:RPC_1928 hypothetical protein
YP_781273.1	KEGG: rpc:RPC_3112 hypothetical protein
YP_781274.1	KEGG: rpc:RPC_3111 hypothetical protein
YP_781275.1	KEGG: rpc:RPC_3110 hypothetical protein
YP_781276.1	PFAM: Hpt domain protein; KEGG: rpc:RPC_3109 Hpt domain protein
YP_781277.1	PFAM: response regulator receiver; KEGG: rpc:RPC_3108 response regulator receiver domain protein (CheY-like)
YP_781278.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: rpb:RPB_4125 diguanylate cyclase
YP_781279.1	catalyzes the phosphorylation of NAD to NADP
YP_781280.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5512 hypothetical protein
YP_781281.1	KEGG: nwi:Nwi_1336 hypothetical protein
YP_781282.1	PFAM: OmpA domain protein transmembrane region-containing protein; porin; KEGG: rpc:RPC_3103 OmpA-like transmembrane region
YP_781283.1	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rpa:RPA3399 cold shock DNA binding protein
YP_781284.1	KEGG: rpa:RPA3400 hypothetical protein
YP_781285.1	KEGG: rpb:RPB_2174 hypothetical protein
YP_781287.1	PFAM: protein of unknown function DUF303, acetylesterase putative; KEGG: ret:RHE_CH02651 hypothetical protein
YP_781288.1	KEGG: ana:alr2841 unknown protein
YP_781289.1	PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B1814 acyltransferase 3
YP_781290.1	KEGG: rpc:RPC_3102 hypothetical protein
YP_781291.1	KEGG: rpc:RPC_3101 hypothetical protein
YP_781292.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_781293.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA3465 putative long-chain-fatty-acid CoA ligase
YP_781294.1	KEGG: rpb:RPB_2103 hypothetical protein
YP_781295.1	PFAM: CoA-binding domain protein; KEGG: rpd:RPD_3312 CoA-binding
YP_781296.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_2983 short-chain dehydrogenase/reductase SDR
YP_781298.1	PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bja:bsl3938 putative biotinylated protein
YP_781299.1	PFAM: carboxyl transferase; KEGG: rpc:RPC_3097 propionyl-CoA carboxylase
YP_781300.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_3096 transcriptional regulator, TetR family
YP_781301.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: rpc:RPC_3095 methylmalonate-semialdehyde dehydrogenase
YP_781302.1	KEGG: rpb:RPB_2118 hypothetical protein
YP_781303.1	KEGG: rpb:RPB_2119 PilT protein-like
YP_781304.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_2120 acyl-CoA dehydrogenase-like
YP_781305.1	catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA
YP_781306.1	TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rpa:RPA3446 3-hydroxyisobutyrate dehydrogenase
YP_781307.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA3445 probable acetyl-CoA synthetase
YP_781308.1	PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_3089 MaoC-like dehydratase
YP_781309.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_3088 short-chain dehydrogenase/reductase SDR
YP_781310.1	PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_3087 HI0933-like protein
YP_781311.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_3086 ABC transporter related
YP_781312.1	PFAM: protein of unknown function DUF188; KEGG: rpd:RPD_2254 protein of unknown function DUF188
YP_781313.1	TIGRFAM: outer membrane autotransporter barrel domain; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Autotransporter beta- domain protein; KEGG: rpb:RPB_3437 outer membrane autotransporter
YP_781314.1	KEGG: rpc:RPC_2342 hypothetical protein
YP_781315.1	PFAM: polysaccharide deacetylase; KEGG: rpc:RPC_2343 polysaccharide deacetylase
YP_781316.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: glutathione peroxidase; KEGG: bja:bll4149 putative glutathione peroxidase
YP_781317.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_2344 ErfK/YbiS/YcfS/YnhG
YP_781318.1	PFAM: CreA family protein; KEGG: rpc:RPC_2345 CreA
YP_781320.1	KEGG: rpc:RPC_2347 hypothetical protein
YP_781321.1	PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rpc:RPC_2348 putative signal transduction histidine kinase
YP_781322.1	KEGG: rpd:RPD_2939 hypothetical protein
YP_781323.1	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rpa:RPA3032 phenylacetic acid degradation-related protein
YP_781324.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_2354 GCN5-related N-acetyltransferase
YP_781325.1	KEGG: rpc:RPC_2355 hypothetical protein
YP_781326.1	PFAM: MgtC/SapB transporter; KEGG: pcr:Pcryo_2508 MgtC/SapB transporter
YP_781327.1	KEGG: rpc:RPC_2357 hypothetical protein
YP_781328.1	PFAM: Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: rpc:RPC_2358 Sel1
YP_781330.1	KEGG: rpa:RPA2732 hypothetical protein
YP_781331.1	KEGG: rpc:RPC_2360 protein tyrosine/serine phosphatase
YP_781332.1	PFAM: Abortive infection protein; KEGG: rpc:RPC_2361 abortive infection protein
YP_781333.1	KEGG: rpb:RPB_2514 hypothetical protein
YP_781334.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: rpa:RPA2292 sensor histidine kinase
YP_781335.1	PFAM: NADPH-dependent FMN reductase; KEGG: rpb:RPB_2517 NADPH-dependent FMN reductase
YP_781336.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sme:SMc04167 putative histidine-rich transporter transmembrane protein
YP_781337.1	KEGG: rpc:RPC_2366 hypothetical protein
YP_781339.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpa:RPA4292 light harvesting protein B-800-850, alpha chain B (antenna pigment protein, alpha chain B) (LH II-B alpha)
YP_781342.1	KEGG: rpb:RPB_2524 hypothetical protein
YP_781343.1	KEGG: rpb:RPB_2525 hypothetical protein
YP_781344.1	KEGG: bja:bsr7707 hypothetical protein
YP_781345.1	KEGG: rpc:RPC_4897 hypothetical protein
YP_781346.1	KEGG: nha:Nham_1812 hypothetical protein
YP_781347.1	KEGG: rpb:RPB_2536 hypothetical protein
YP_781348.1	KEGG: rpb:RPB_2537 hypothetical protein
YP_781349.1	PFAM: Integrase, catalytic region; KEGG: bmb:BruAb1_0746 transposase, hypothetical
YP_781352.1	KEGG: hypothetical protein
YP_781354.1	PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr0034 putative transposase
YP_781355.1	PFAM: IS66 Orf2 family protein; KEGG: mag:amb0402 transposase and inactivated derivative
YP_781356.1	PFAM: transposase IS66; KEGG: mag:amb3325 transposase and inactivated derivative
YP_781358.1	PFAM: peptidase M41; AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: mag:amb1687 ATP-dependent Zn protease
YP_781361.1	PFAM: helix-turn-helix domain protein; KEGG: ret:RHE_CH00634 hypothetical protein
YP_781362.1	KEGG: nha:Nham_4457 hypothetical protein
YP_781363.1	KEGG: nha:Nham_4458 putative threonine efflux protein
YP_781364.1	KEGG: nha:Nham_4459 hypothetical protein
YP_781365.1	KEGG: rpb:RPB_2541 hypothetical protein
YP_781366.1	KEGG: rpb:RPB_2542 hypothetical protein
YP_781367.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpb:RPB_2543 DEAD/DEAH box helicase
YP_781368.1	KEGG: rme:Rmet_6083 hypothetical protein
YP_781369.1	KEGG: mlo:msr6604 hypothetical protein
YP_781370.1	KEGG: rpc:RPC_1735 ABC-type phosphate transport system periplasmic component-like
YP_781371.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; KEGG: rpc:RPC_1734 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
YP_781372.1	KEGG: rpc:RPC_1545 hypothetical protein
YP_781373.1	PFAM: BLUF domain protein; KEGG: rpa:RPA3367 possible activator of photopigment and puc with BLUF domain
YP_781375.1	KEGG: pol:Bpro_5346 hypothetical protein
YP_781377.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_1253 methyl-accepting chemotaxis sensory transducer
YP_781378.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4407 methyl-accepting chemotaxis sensory transducer
YP_781379.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpa:RPA3219 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL)
YP_781380.1	KEGG: rpa:RPA4449 pmethyl-accepting chemotaxis receptor/sensory transducer
YP_781382.1	PFAM: metallophosphoesterase; KEGG: sat:SYN_00526 calcineurin-like phosphoesterase
YP_781383.1	KEGG: gvi:gll4095 hypothetical protein
YP_781384.1	KEGG: rme:Rmet_2339 hypothetical protein
YP_781385.1	KEGG: rme:Rmet_2340 hypothetical protein
YP_781386.1	KEGG: rme:Rmet_2341 hypothetical protein
YP_781387.1	KEGG: pol:Bpro_5159 hypothetical protein
YP_781388.1	PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rme:Rmet_2342 AAA ATPase, central region
YP_781389.1	KEGG: bja:bsr0071 hypothetical protein
YP_781390.1	PFAM: helix-turn-helix domain protein; KEGG: bja:bll0070 hypothetical protein
YP_781391.1	PFAM: protein of unknown function DUF955; KEGG: bja:bll0069 hypothetical protein
YP_781392.1	KEGG: bja:bll0068 exonuclease I; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease
YP_781393.1	KEGG: bja:bll4265 hypothetical protein
YP_781394.1	KEGG: bja:bll4266 hypothetical protein
YP_781395.1	KEGG: bja:bll4267 hypothetical protein
YP_781396.1	KEGG: bja:bll4268 hypothetical protein
YP_781397.1	PFAM: phage integrase family protein; KEGG: bja:bll4269 hypothetical protein
YP_781398.1	KEGG: bja:bll4270 hypothetical protein
YP_781399.1	PFAM: phage integrase family protein; KEGG: bja:bll4271 hypothetical protein
YP_781401.1	PFAM: SMC domain protein; KEGG: bja:bll1930 hypothetical protein
YP_781402.1	PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rpd:RPD_3368 ATP-binding region, ATPase-like
YP_781403.1	PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease
YP_781405.1	PFAM: helix-turn-helix domain protein
YP_781406.1	KEGG: bja:bll2295 hypothetical protein
YP_781407.1	KEGG: rsp:RSP_3808 hypothetical protein
YP_781410.1	PFAM: Patatin; KEGG: rpd:RPD_2292 patatin
YP_781411.1	KEGG: pol:Bpro_1540 hypothetical protein
YP_781412.1	KEGG: vvu:VV12027 hypothetical protein
YP_781413.1	KEGG: gka:GK2254 DNA-directed RNA polymerase ECF-type sigma factor (sigma-X)
YP_781415.1	PFAM: protein of unknown function DUF955; KEGG: rsp:RSP_4244 hypothetical protein
YP_781416.1	KEGG: nha:Nham_0079 hypothetical protein
YP_781417.1	KEGG: rpd:RPD_0028 hypothetical protein
YP_781418.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; peptidase C14, caspase catalytic subunit p20; KEGG: sat:SYN_01854 helicase
YP_781419.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_781420.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_2383 protein of unknown function DUF6, transmembrane
YP_781421.1	KEGG: rpc:RPC_2385 hypothetical protein
YP_781422.1	KEGG: rpd:RPD_2903 hypothetical protein
YP_781423.1	KEGG: rpc:RPC_2386 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp
YP_781424.1	PFAM: nitrogen regulatory protein P-II; KEGG: rpc:RPC_2387 nitrogen regulatory protein P-II (GlnB, GlnK)
YP_781425.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: rpc:RPC_2388 protein of unknown function UPF0031
YP_781426.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; KEGG: rpc:RPC_2390 twin-arginine translocation pathway signal
YP_781427.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_781428.1	PFAM: peptidase S14, ClpP; KEGG: rpb:RPB_2563 endopeptidase Clp
YP_781429.1	binds and unfolds substrates as part of the ClpXP protease
YP_781430.1	KEGG: rpc:RPC_2394 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_781432.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpb:RPB_2567 hydrophobe/amphiphile efflux-1 HAE1
YP_781433.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpb:RPB_2568 secretion protein HlyD
YP_781434.1	catalyzes the release of the N-terminal amino acid from a tripeptide
YP_781435.1	PFAM: histone family protein DNA-binding protein; KEGG: rpb:RPB_2570 histone-like DNA-binding protein
YP_781436.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5623 TPR domain protein
YP_781437.1	Catalyzes the transfer of electrons from NADH to quinone
YP_781438.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_781439.1	Catalyzes the transfer of electrons from NADH to quinone
YP_781440.1	crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown
YP_781441.1	Catalyzes the transfer of electrons from NADH to quinone
YP_781442.1	TIGRFAM: methyltransferase FkbM family; KEGG: rpc:RPC_2405 methyltransferase FkbM
YP_781443.1	Catalyzes the transfer of electrons from NADH to quinone
YP_781444.1	KEGG: rpc:RPC_2407 hypothetical protein
YP_781445.1	part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase
YP_781446.1	KEGG: rpc:RPC_2409 hypothetical protein
YP_781447.1	Catalyzes the transfer of electrons from NADH to quinone
YP_781448.1	Catalyzes the transfer of electrons from NADH to quinone
YP_781449.1	Catalyzes the transfer of electrons from NADH to quinone
YP_781450.1	Catalyzes the transfer of electrons from NADH to quinone
YP_781451.1	PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: rpc:RPC_2414 NADH-ubiquinone oxidoreductase, chain 4L
YP_781452.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_781453.1	Catalyzes the transfer of electrons from NADH to quinone
YP_781454.1	Catalyzes the transfer of electrons from NADH to quinone
YP_781455.1	TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: rpc:RPC_2418 biotin--acetyl-CoA-carboxylase ligase
YP_781456.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rpc:RPC_2419 beta-lactamase-like
YP_781457.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpa:RPA2934 hypothetical protein
YP_781458.1	PFAM: protein of unknown function DUF1467; KEGG: rpc:RPC_2421 protein of unknown function DUF1467
YP_781460.1	KEGG: rpc:RPC_2422 hypothetical protein
YP_781461.1	PFAM: protein of unknown function DUF461; KEGG: rpb:RPB_2594 protein of unknown function DUF461
YP_781462.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_781463.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_2428 lipoprotein releasing system, transmembrane protein, LolC/E family
YP_781464.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_2429 ABC transporter related
YP_781465.1	KEGG: rpd:RPD_2862 hypothetical protein
YP_781466.1	KEGG: rpd:RPD_2861 hypothetical protein
YP_781467.1	KEGG: rpc:RPC_2431 hypothetical protein
YP_781468.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
YP_781469.1	KEGG: rpc:RPC_2434 hypothetical protein
YP_781470.1	PFAM: PilT protein domain protein; KEGG: rpc:RPC_2435 PilT protein-like
YP_781471.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_781472.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_781473.1	Catalyzes the phosphorylation of UMP to UDP
YP_781474.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_781475.1	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate
YP_781476.1	PFAM: phosphatidate cytidylyltransferase; KEGG: rpc:RPC_2441 phosphatidate cytidylyltransferase
YP_781477.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_781478.1	TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: rpc:RPC_2443 peptidase M50, putative membrane-associated zinc metallopeptidase
YP_781479.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: rpc:RPC_2444 surface antigen (D15)
YP_781480.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_781481.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_781482.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_781483.1	PFAM: protein of unknown function DUF1009; KEGG: rpa:RPA2910 hypothetical protein
YP_781484.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_781485.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
YP_781486.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_781487.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_781488.1	PFAM: ComEC/Rec2-related protein; KEGG: rpc:RPC_2453 ComEC/Rec2-related protein
YP_781489.1	Represses a number of genes involved in the response to DNA damage
YP_781490.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: rpc:RPC_2455 MoeA-like, domain I and II
YP_781491.1	KEGG: rpa:RPA2901 hypothetical protein
YP_781492.1	KEGG: rpc:RPC_1306 hypothetical protein
YP_781493.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: bja:blr1253 dehydrogenase
YP_781495.1	KEGG: rpa:RPA1717 hypothetical protein
YP_781498.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_1951 hypothetical protein
YP_781499.1	KEGG: rpb:RPB_3014 hypothetical protein
YP_781500.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_2458 HAD-superfamily hydrolase subfamily IA, variant 3
YP_781501.1	KEGG: rpc:RPC_2459 OmpA/MotB
YP_781502.1	PFAM: type IV pilus assembly PilZ; KEGG: rpa:RPA4296 hypothetical protein
YP_781503.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: rpc:RPC_2461 ATPase, E1-E2 type
YP_781504.1	PFAM: heat shock protein Hsp20; KEGG: rpc:RPC_2462 heat shock protein HSP20
YP_781505.1	KEGG: rpc:RPC_2463 hypothetical protein
YP_781506.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_781507.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
YP_781508.1	involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water
YP_781509.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_781510.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpc:RPC_2468 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_781511.1	PFAM: triosephosphate isomerase; KEGG: rpc:RPC_2471 triosephosphate isomerase
YP_781512.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: rpc:RPC_2472 preprotein translocase, SecG subunit
YP_781513.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_781514.1	PFAM: protein of unknown function DUF1217; KEGG: rpc:RPC_2474 protein of unknown function DUF1217
YP_781515.1	PFAM: PAAR repeat-containing protein; KEGG: rpb:RPB_2789 PaaR
YP_781516.1	KEGG: rpa:RPA2882 hypothetical protein
YP_781517.1	KEGG: bbr:BB1689 hypothetical protein
YP_781518.1	KEGG: rpc:RPC_2476 hypothetical protein
YP_781519.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_781520.1	TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: rpc:RPC_1006 glutamate synthase (NADPH), homotetrameric
YP_781521.1	TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; GAF domain protein; KEGG: rpc:RPC_2479 putative GAF sensor protein
YP_781522.1	KEGG: bja:bll4799 hypothetical protein
YP_781523.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rpc:RPC_2481 glucose-methanol-choline oxidoreductase
YP_781524.1	NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis
YP_781525.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_781526.1	PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_2484 putative NADH oxidoreductase
YP_781527.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rpc:RPC_2485 lysine exporter protein (LysE/YggA)
YP_781528.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rpc:RPC_2487 NADPH-dependent FMN reductase
YP_781529.1	PFAM: Septum formation initiator; KEGG: rpc:RPC_2488 septum formation initiator
YP_781530.1	PFAM: dehydrogenase, E1 component; KEGG: rpc:RPC_2489 pyruvate dehydrogenase (lipoamide)
YP_781532.1	catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase
YP_781533.1	KEGG: rpb:RPB_2769 hypothetical protein
YP_781534.1	KEGG: rpc:RPC_2492 dihydrolipoamide acetyltransferase, long form; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein
YP_781535.1	KEGG: nwi:Nwi_1815 hypothetical protein
YP_781536.1	E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_781537.1	KEGG: mag:amb4173 hypothetical protein
YP_781539.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpc:RPC_2495 Sel1-like
YP_781540.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpd:RPD_2804 exodeoxyribonuclease III
YP_781541.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_2497 secretion protein HlyD
YP_781542.1	PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2498 acriflavin resistance protein
YP_781543.1	KEGG: rpb:RPB_2754 neurotransmitter-gated ion-channel ligand-binding
YP_781544.1	KEGG: rpd:RPD_2798 hypothetical protein
YP_781545.1	PFAM: protein of unknown function DUF433; KEGG: rpc:RPC_2499 protein of unknown function DUF433
YP_781546.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpd:RPD_2797 HesB/YadR/YfhF
YP_781547.1	KEGG: rpc:RPC_2507 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: putative deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region
YP_781548.1	KEGG: rpa:RPA2550 hypothetical protein
YP_781549.1	PFAM: porin; KEGG: rpb:RPB_3036 putative Omp2b porin
YP_781550.1	PFAM: Lytic transglycosylase, catalytic; KEGG: rpc:RPC_2890 lytic transglycosylase, catalytic
YP_781551.1	KEGG: rpc:RPC_2889 hypothetical protein
YP_781552.1	Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis
YP_781553.1	KEGG: rpb:RPB_3129 secretin/TonB, short-like protein
YP_781554.1	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_3128 sigma-24 (FecI-like)
YP_781555.1	PFAM: FecR protein; KEGG: rpb:RPB_3127 putative FecR
YP_781556.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: rpb:RPB_3126 filamentous haemagglutinin-like protein
YP_781557.1	KEGG: gox:GOX1578 hypothetical protein
YP_781558.1	PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: gox:GOX1577 ATP-dependent Clp protease ATP-binding subunit ClpA
YP_781560.1	KEGG: gox:GOX1574 hypothetical protein
YP_781561.1	KEGG: ccr:CC0185 TonB-dependent receptor
YP_781562.1	PFAM: Secretin/TonB, short N-terminal domain; KEGG: rpb:RPB_2211 hypothetical protein
YP_781563.1	PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_2212 sigma-24 (FecI-like)
YP_781564.1	PFAM: FecR protein; KEGG: rpb:RPB_2213 putative FecR
YP_781565.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: rpc:RPC_2911 filamentous haemagglutinin-like
YP_781566.1	TIGRFAM: TonB family protein; KEGG: rpb:RPB_2211 hypothetical protein
YP_781567.1	PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_2212 sigma-24 (FecI-like)
YP_781568.1	PFAM: FecR protein; KEGG: rpb:RPB_2213 putative FecR
YP_781569.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: bur:Bcep18194_B1068 haemagglutinin-like
YP_781570.1	KEGG: mag:amb3151 transposase and inactivated derivative
YP_781571.1	PFAM: Secretin/TonB, short N-terminal domain; KEGG: rpb:RPB_3129 secretin/TonB, short-like protein
YP_781572.1	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_3128 sigma-24 (FecI-like)
YP_781573.1	PFAM: FecR protein; KEGG: rpc:RPC_2904 putative FecR
YP_781574.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: rpc:RPC_2997 filamentous haemagglutinin-like
YP_781575.1	TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: rpc:RPC_3004 putative general secretion pathway protein J
YP_781576.1	TIGRFAM: Prepilin-type cleavage/methylation-like
YP_781577.1	KEGG: bja:bll6018 probable general secretion pathway protein H precursor
YP_781578.1	TIGRFAM: general secretion pathway protein G; PFAM: secretion system protein G; KEGG: bja:bll6019 probable general secretion pathway protein G precursor
YP_781579.1	PFAM: type II secretion system protein; KEGG: bja:bll6020 probable general secretion pathway protein F
YP_781580.1	PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: bja:bll6021 general secretion pathway protein E
YP_781581.1	KEGG: rpc:RPC_2998 hypothetical protein
YP_781583.1	PFAM: Fimbrial assembly family protein; KEGG: bja:bll6015 putative general secretory pathway protein L
YP_781584.1	KEGG: bja:bll6016 putative general secretory pathway protein K
YP_781585.1	KEGG: bja:blr6023 general secretion pathway protein O
YP_781586.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rpc:RPC_3010 type II and III secretion system protein
YP_781587.1	PFAM: Sigma-70, region 4 type 2; KEGG: rpb:RPB_2205 sigma-24 (FecI-like)
YP_781588.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1067 TPR repeat protein
YP_781589.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5623 TPR domain protein
YP_781590.1	KEGG: rpc:RPC_2999 hypothetical protein
YP_781591.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: rpa:RPA0173 putative sugar nucleotide dehydratase
YP_781592.1	KEGG: rpb:RPB_3126 filamentous haemagglutinin-like protein
YP_781593.1	KEGG: rpc:RPC_2931 hypothetical protein
YP_781594.1	KEGG: rpc:RPC_2930 hypothetical protein
YP_781595.1	TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rpc:RPC_2929 arginase
YP_781598.1	KEGG: rpc:RPC_2927 hypothetical protein
YP_781599.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_781600.1	PFAM: phosphoribulokinase/uridine kinase; KEGG: rpc:RPC_2898 phosphoribulokinase
YP_781601.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
YP_781602.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
YP_781603.1	catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation
YP_781604.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_2894 HAD-superfamily hydrolase subfamily IA, variant 3
YP_781605.1	KEGG: rpc:RPC_0662 hypothetical protein
YP_781606.1	KEGG: rpa:RPA4550 hypothetical protein
YP_781607.1	KEGG: rpd:RPD_1466 hypothetical protein
YP_781608.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_781609.1	PFAM: Sporulation domain protein; KEGG: rpc:RPC_2509 sporulation related
YP_781610.1	PFAM: glycoside hydrolase, family 3 domain protein; KEGG: rpb:RPB_2748 beta-N-acetylhexosaminidase
YP_781611.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: rpc:RPC_2511 chromosome segregation and condensation protein ScpA
YP_781612.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rpc:RPC_2512 putative transcriptional regulator
YP_781613.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes
YP_781614.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: rpc:RPC_2514 twin-arginine translocation protein TatB
YP_781615.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rpb:RPB_2743 sec-independent protein translocase TatC
YP_781616.1	KEGG: rpc:RPC_2516 hypothetical protein
YP_781617.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_781618.1	KEGG: rpc:RPC_1548 hypothetical protein
YP_781619.1	KEGG: rpc:RPC_2518 hypothetical protein
YP_781620.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_781621.1	PFAM: response regulator receiver; KEGG: rpc:RPC_2520 response regulator receiver domain protein (CheY-like)
YP_781622.1	KEGG: rpc:RPC_2521 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11
YP_781623.1	PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: rpc:RPC_2522 peptidase M23B
YP_781624.1	PFAM: protein of unknown function DUF1232; KEGG: rpc:RPC_2523 protein of unknown function DUF1232
YP_781625.1	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction
YP_781626.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rpc:RPC_2525 TRAP transporter solute receptor, TAXI family
YP_781627.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: rpb:RPB_0103 GTPase
YP_781628.1	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: rpc:RPC_2532 peptidylprolyl isomerase
YP_781630.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpa:RPA1492 light harvesting protein B-800-850, alpha chain E (antenna pigment protein, alpha chain E) (LH II-E alpha)
YP_781631.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpb:RPB_4448 antenna complex, alpha/beta subunit
YP_781632.1	KEGG: rpb:RPB_2190 hypothetical protein
YP_781634.1	KEGG: fra:Francci3_1958 integrase
YP_781635.1	PFAM: Secretin/TonB, short N-terminal domain; KEGG: rpb:RPB_3129 secretin/TonB, short-like protein
YP_781636.1	PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_3128 sigma-24 (FecI-like)
YP_781637.1	PFAM: FecR protein; KEGG: rpb:RPB_3127 putative FecR
YP_781638.1	KEGG: bur:Bcep18194_B1068 haemagglutinin-like
YP_781639.1	PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: rpc:RPC_2542 alpha-2-macroglobulin-like
YP_781640.1	TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; Penicillin-binding domain protein; KEGG: rpa:RPA2554 penicillin binding protein
YP_781641.1	PFAM: glycosyl transferase, family 39; KEGG: rpc:RPC_2544 glycosyl transferase, family 39
YP_781642.1	PFAM: phosphoesterase, PA-phosphatase related; KEGG: rpc:RPC_2545 phosphoesterase, PA-phosphatase related
YP_781643.1	PFAM: glycosyl transferase, family 2; KEGG: rpc:RPC_2546 glycosyl transferase, family 2
YP_781644.1	PFAM: lipid A biosynthesis domain protein; KEGG: rpb:RPB_2914 lipid A biosynthesis-like
YP_781645.1	TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: rpc:RPC_2548 cystathionine beta-lyase
YP_781646.1	TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein, family 3; KEGG: rpc:RPC_2549 lysine-arginine-ornithine-binding periplasmic protein
YP_781647.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_2550 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
YP_781648.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_2551 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
YP_781649.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2561 ABC transporter related
YP_781650.1	KEGG: rpd:RPD_2562 hypothetical protein
YP_781651.1	CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis
YP_781652.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_2554 cyclopropane-fatty-acyl-phospholipid synthase
YP_781653.1	PFAM: protein of unknown function DUF1365; KEGG: rpc:RPC_2555 protein of unknown function DUF1365
YP_781654.1	PFAM: amine oxidase; KEGG: rpb:RPB_2904 amine oxidase
YP_781656.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rpc:RPC_2557 RND efflux system, outer membrane lipoprotein, NodT
YP_781657.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_2558 secretion protein HlyD
YP_781658.1	PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2559 acriflavin resistance protein
YP_781659.1	PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2560 acriflavin resistance protein
YP_781660.1	PFAM: DTW domain containing protein; KEGG: rpc:RPC_2561 DTW
YP_781661.1	KEGG: bja:bsl2206 hypothetical protein
YP_781662.1	KEGG: rpc:RPC_2563 hypothetical protein
YP_781663.1	KEGG: rpc:RPC_2564 hypothetical protein
YP_781664.1	PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_2567 protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_781665.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rpc:RPC_2568 type I secretion outer membrane protein, TolC
YP_781666.1	KEGG: rpb:RPB_2893 hypothetical protein
YP_781667.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_781668.1	responsible for recognizing base lesions in the genome and initiating base excision DNA repair
YP_781669.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_781670.1	PFAM: cyclase/dehydrase; KEGG: rpc:RPC_2573 cyclase/dehydrase
YP_781671.1	PFAM: CinA domain protein; KEGG: rpc:RPC_2574 CinA-like
YP_781672.1	TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: rpc:RPC_2575 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_781673.1	TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: rpc:RPC_2576 dihydrouridine synthase TIM-barrel protein nifR3
YP_781674.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: rpc:RPC_2577 signal transduction histidine kinase, nitrogen specific, NtrB
YP_781675.1	KEGG: rpc:RPC_2578 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase
YP_781676.1	KEGG: rpc:RPC_2579 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_781677.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rpc:RPC_2580 two component, sigma54 specific, transcriptional regulator, fis family
YP_781678.1	catalyzes the transamination of D-amino acids and their alpha-keto acids
YP_781679.1	Stimulates the elongation of poly(A) tails
YP_781680.1	PFAM: GTP-binding protein, HSR1-related; KEGG: rpc:RPC_2583 GTP-binding protein, HSR1-related
YP_781681.1	negatively supercoils closed circular double-stranded DNA
YP_781682.1	KEGG: rpc:RPC_2587 hypothetical protein
YP_781683.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_781684.1	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rpc:RPC_2589 peptidyl-prolyl cis-trans isomerase, cyclophilin type
YP_781685.1	KEGG: rpd:RPD_2600 hypothetical protein
YP_781686.1	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rpc:RPC_2590 peptidyl-prolyl cis-trans isomerase, cyclophilin type
YP_781687.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_781688.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_781689.1	KEGG: rpd:RPD_2604 hypothetical protein
YP_781691.1	TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rpc:RPC_2594 cysteine synthase A
YP_781692.1	KEGG: rpc:RPC_2595 hypothetical protein
YP_781693.1	KEGG: rpb:RPB_2864 hypothetical protein
YP_781694.1	KEGG: rpc:RPC_2598 hypothetical protein
YP_781695.1	PFAM: Collagen triple helix repeat; KEGG: rpc:RPC_2599 collagen triple helix repeat
YP_781697.1	PFAM: glycosyl transferase, family 2; KEGG: rpc:RPC_2600 glycosyl transferase, family 2
YP_781698.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_2601 hypothetical protein
YP_781699.1	KEGG: rpc:RPC_2602 putative beta (1-6) glucans synthase
YP_781700.1	KEGG: rpc:RPC_2603 hypothetical protein
YP_781701.1	KEGG: rpc:RPC_2604 hypothetical protein
YP_781702.1	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis
YP_781703.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_781704.1	PFAM: protein of unknown function DUF502; KEGG: rpd:RPD_2619 protein of unknown function DUF502
YP_781705.1	PFAM: helicase domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; DEAD/DEAH box helicase domain protein; KEGG: rpc:RPC_2608 DEAD/DEAH box helicase-like
YP_781706.1	PFAM: protein of unknown function DUF339; KEGG: rpd:RPD_2621 protein of unknown function DUF339
YP_781707.1	TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: rpc:RPC_2610 transcription-repair coupling factor
YP_781708.1	KEGG: rpc:RPC_2611 hypothetical protein
YP_781709.1	KEGG: rpc:RPC_2612 putative acid-CoA ligase
YP_781710.1	PFAM: extracellular solute-binding protein, family 5; KEGG: rpc:RPC_2613 extracellular solute-binding protein, family 5
YP_781711.1	PFAM: Invasion associated locus B family protein; KEGG: rpc:RPC_2614 invasion associated locus B
YP_781712.1	TIGRFAM: hemimethylated DNA binding protein; KEGG: rpa:RPA2669 hypothetical protein
YP_781713.1	PFAM: Auxin Efflux Carrier; KEGG: rpc:RPC_2616 auxin efflux carrier
YP_781714.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: rpc:RPC_2617 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_781715.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpc:RPC_2618 phosphatidylcholine synthase
YP_781716.1	PFAM: Integral membrane protein TerC; KEGG: bja:bll4584 hypothetical protein
YP_781717.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_2619 alcohol dehydrogenase, zinc-binding
YP_781718.1	KEGG: rpd:RPD_2667 hypothetical protein
YP_781719.1	KEGG: dar:Daro_1107 hypothetical protein
YP_781720.1	PFAM: plasmid stabilization system
YP_781721.1	KEGG: rpc:RPC_2160 hypothetical protein
YP_781722.1	KEGG: sme:SMc00686 hypothetical protein
YP_781723.1	KEGG: rpc:RPC_2657 hypothetical protein
YP_781724.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: bja:blr1253 dehydrogenase
YP_781725.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_781726.1	TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone domain protein; KEGG: rpc:RPC_2660 protein of unknown function DUF193
YP_781727.1	KEGG: rpc:RPC_2661 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein
YP_781728.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_781729.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_781730.1	Regulates rRNA biosynthesis by transcriptional antitermination
YP_781731.1	KEGG: rpd:RPD_2677 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein
YP_781732.1	pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient
YP_781733.1	KEGG: rpa:RPA2733 hypothetical protein
YP_781734.1	PFAM: alpha/beta hydrolase fold; KEGG: rpd:RPD_2679 alpha/beta hydrolase fold
YP_781735.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bja:bll6183 hypothetical protein
YP_781736.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: bja:bll6184 two-component sensor histidine kinase
YP_781737.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: bja:blr6185 two-component response regulator
YP_781738.1	KEGG: bja:bll3470 hypothetical protein
YP_781739.1	PFAM: SmpA/OmlA domain protein; KEGG: rpc:RPC_2672 SmpA/OmlA
YP_781740.1	PFAM: Ubiquinol-cytochrome C chaperone; KEGG: rpc:RPC_2673 ubiquinol-cytochrome c chaperone
YP_781741.1	KEGG: rpc:RPC_2674 hypothetical protein
YP_781742.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_781743.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_781744.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_781745.1	PFAM: regulatory protein, MerR; KEGG: rpc:RPC_2678 transcriptional regulator, MerR family
YP_781746.1	PFAM: protein of unknown function DUF1212; KEGG: rpc:RPC_2893 protein of unknown function DUF1212
YP_781747.1	KEGG: rpc:RPC_2892 hypothetical protein
YP_781748.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpa:RPA1492 light harvesting protein B-800-850, alpha chain E (antenna pigment protein, alpha chain E) (LH II-E alpha)
YP_781749.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_0219 antenna complex, alpha/beta subunit
YP_781750.1	KEGG: nha:Nham_4263 hypothetical protein
YP_781752.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: bja:bll2244 probable cAMP-regulatory protein
YP_781754.1	PFAM: ABC-3 protein; KEGG: jan:Jann_2083 ABC-3
YP_781755.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: jan:Jann_2082 ABC-3
YP_781756.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sil:SPO3365 zinc/manganese/iron ABC transporter, ATP-binding protein
YP_781757.1	PFAM: periplasmic solute binding protein; KEGG: sil:SPO3366 zinc/manganese/iron ABC transporter, periplasmic zinc/manganese/iron-binding protein
YP_781758.1	KEGG: rpc:RPC_2681 hypothetical protein
YP_781759.1	PFAM: sugar transferase; KEGG: rpd:RPD_2694 sugar transferase
YP_781760.1	PFAM: glycosyl transferase, group 1; KEGG: rpc:RPC_2683 glycosyl transferase, group 1
YP_781761.1	PFAM: polysaccharide export protein; KEGG: rpc:RPC_4940 polysaccharide export protein
YP_781762.1	PFAM: lipopolysaccharide biosynthesis; KEGG: rpc:RPC_2684 lipopolysaccharide biosynthesis
YP_781763.1	KEGG: rpc:RPC_2685 hypothetical protein
YP_781764.1	PFAM: polysaccharide deacetylase; KEGG: rpd:RPD_2699 polysaccharide deacetylase
YP_781765.1	KEGG: rpc:RPC_2686 hypothetical protein
YP_781766.1	PFAM: cytochrome oxidase assembly; KEGG: rpc:RPC_2687 cytochrome oxidase assembly
YP_781767.1	PFAM: protein of unknown function DUF190; KEGG: rpc:RPC_2688 protein of unknown function DUF190
YP_781768.1	PFAM: Camphor resistance CrcB protein; KEGG: rpc:RPC_2689 CrcB protein
YP_781769.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_781770.1	catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol
YP_781771.1	PFAM: CoA-binding domain protein; KEGG: rpb:RPB_2668 CoA-binding
YP_781772.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_781773.1	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_2695 phenylacetic acid degradation-related protein
YP_781774.2	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_781775.1	forms a direct contact with the tRNA during translation
YP_781776.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_2698 diguanylate cyclase (GGDEF domain)
YP_781777.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rpc:RPC_2699 antibiotic biosynthesis monooxygenase
YP_781778.1	PFAM: protein of unknown function UPF0118; KEGG: rpc:RPC_2700 protein of unknown function UPF0118
YP_781779.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: rpc:RPC_2701 rare lipoprotein A
YP_781780.1	PFAM: alpha/beta hydrolase fold; KEGG: rpd:RPD_2713 alpha/beta hydrolase fold
YP_781781.1	PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: rpc:RPC_2702 serine-type D-Ala-D-Ala carboxypeptidase
YP_781782.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
YP_781783.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA
YP_781784.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_781785.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: rpa:RPA2778 possible deoxyribonuclease
YP_781786.1	KEGG: rpa:RPA2779 possible hydrolase
YP_781787.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpa:RPA0809 transcriptional regulator, LysR family
YP_781788.1	KEGG: sil:SPO2657 ACC deaminase/D-cysteine desulfhydrase family; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_781789.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bpm:BURPS1710b_0969 major facilitator family transporter
YP_781790.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cvi:CV0615 hypothetical protein
YP_781791.1	activates fatty acids by binding to coenzyme A
YP_781792.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpb:RPB_2685 TrapT DctQ-M fusion permease, dicarboxylate transport
YP_781793.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; Twin-arginine translocation pathway signal; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpb:RPB_2686 TRAP dicarboxylate transporter DctP subunit
YP_781794.1	PFAM: sulfatase; KEGG: rpc:RPC_2738 sulfatase
YP_781795.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_2740 transcriptional regulator, LysR family
YP_781796.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_2742 methyl-accepting chemotaxis sensory transducer
YP_781797.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_2744 methyl-accepting chemotaxis sensory transducer
YP_781798.1	PFAM: UvrD/REP helicase; KEGG: rpc:RPC_2745 UvrD/REP helicase
YP_781799.1	KEGG: rpc:RPC_3390 hypothetical protein
YP_781800.1	KEGG: rpa:RPA2803 hypothetical protein
YP_781801.1	TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: rpc:RPC_2751 ExsB
YP_781802.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era
YP_781803.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rpb:RPB_2711 hypothetical protein
YP_781804.1	KEGG: rpb:RPB_2712 hypothetical protein
YP_781805.1	binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA
YP_781806.1	KEGG: rpd:RPD_2756 putative outer membrane protein
YP_781807.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
YP_781809.1	KEGG: rpc:RPC_2759 hypothetical protein
YP_781811.1	KEGG: rpd:RPD_2764 hypothetical protein
YP_781812.1	KEGG: rpc:RPC_2763 putative outer-membrane protein precursor
YP_781813.1	KEGG: rpc:RPC_2764 hypothetical protein
YP_781814.1	PFAM: Ion transport protein; Ion transport 2 domain protein,; KEGG: rpc:RPC_2765 ion transport 2
YP_781815.1	KEGG: rpb:RPB_2721 hypothetical protein
YP_781816.1	KEGG: bja:bsr4721 hypothetical protein
YP_781817.1	KEGG: rpb:RPB_2725 hypothetical protein
YP_781818.1	KEGG: rpd:RPD_2771 hypothetical protein
YP_781819.1	PFAM: protein of unknown function DUF1127; KEGG: rpc:RPC_2771 protein of unknown function DUF1127
YP_781820.1	TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine
YP_781821.1	KEGG: rpc:RPC_2773 phytoene synthase
YP_781822.1	PFAM: protein of unknown function DUF498; KEGG: rpc:RPC_2774 protein of unknown function DUF498
YP_781823.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_781824.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_781825.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: rpa:RPA2832 putative membrane protein, possible preprotein translocase
YP_781826.1	PFAM: protein of unknown function DUF815; KEGG: rpc:RPC_2778 protein of unknown function DUF815
YP_781827.1	PFAM: pyruvate carboxyltransferase; KEGG: rpc:RPC_2780 pyruvate carboxyltransferase
YP_781828.1	PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rpc:RPC_2781 carbamoyl-phosphate synthase L chain, ATP-binding
YP_781829.1	PFAM: carboxyl transferase; KEGG: rpc:RPC_2782 propionyl-CoA carboxylase
YP_781830.1	PFAM: ETC complex I subunit conserved region; KEGG: rpb:RPB_2935 ETC complex I subunit conserved region
YP_781831.1	KEGG: rpc:RPC_2784 putative OpgC protein
YP_781832.1	tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan
YP_781833.1	KEGG: rpc:RPC_2788 hypothetical protein
YP_781834.1	PFAM: protein of unknown function DUF192; KEGG: rpc:RPC_2790 protein of unknown function DUF192
YP_781835.1	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rpc:RPC_2791 cold-shock DNA-binding domain protein
YP_781836.1	PFAM: Silent information regulator protein Sir2; KEGG: rpc:RPC_2792 silent information regulator protein Sir2
YP_781837.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpc:RPC_2794 glyoxalase/bleomycin resistance protein/dioxygenase
YP_781838.1	PFAM: type IV pilus assembly PilZ; KEGG: rpc:RPC_2795 hypothetical protein
YP_781840.1	KEGG: rpc:RPC_2801 hypothetical protein
YP_781841.1	KEGG: rpc:RPC_2802 hypothetical protein
YP_781842.1	KEGG: rpb:RPB_4353 hypothetical protein
YP_781843.1	KEGG: rpc:RPC_2804 hypothetical protein
YP_781844.1	KEGG: rpc:RPC_2805 hypothetical protein
YP_781845.1	TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: rpc:RPC_2807 protein of unknown function DUF160
YP_781846.1	PFAM: tRNA synthetase, class II (D, K and N); KEGG: rpc:RPC_2808 lysine--tRNA ligase
YP_781847.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_781848.1	PFAM: peptidase M23B; KEGG: rpc:RPC_2810 peptidase M23B
YP_781849.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_2811 lytic murein transglycosylase
YP_781850.1	KEGG: rpc:RPC_2812 membrane protein
YP_781851.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: rpc:RPC_2813 single-stranded-DNA-specific exonuclease RecJ
YP_781852.1	TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bja:blr4364 putative haloacid dehalogenase
YP_781853.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_781854.1	catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine
YP_781855.1	PFAM: aminotransferase, class I and II; KEGG: rpc:RPC_2817 aminotransferase, class I and II
YP_781856.1	KEGG: rpc:RPC_2818 hypothetical protein
YP_781857.1	TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rpc:RPC_2819 poly(R)-hydroxyalkanoic acid synthase, class I
YP_781858.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: bja:bll5864 hypothetical protein
YP_781859.1	KEGG: rpb:RPB_2970 hypothetical protein
YP_781860.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpa:RPA2492 hypothetical protein
YP_781861.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis
YP_781862.1	KEGG: rpc:RPC_2826 hypothetical protein
YP_781863.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_781864.1	PFAM: electron transport protein SCO1/SenC; KEGG: ccr:CC3503 SCO1/2 family protein
YP_781865.1	PFAM: protein of unknown function DUF461; KEGG: rpb:RPB_2594 protein of unknown function DUF461
YP_781866.1	KEGG: bmb:BruAb2_0820 hypothetical membrane antigen
YP_781867.1	KEGG: nha:Nham_2317 DNA topoisomerase IV, B subunit
YP_781868.1	KEGG: nha:Nham_2318 hypothetical protein
YP_781869.1	KEGG: rpc:RPC_2829 plasmid maintenance system antidote protein, XRE family
YP_781870.1	KEGG: rpc:RPC_2832 hypothetical protein
YP_781871.1	KEGG: rpc:RPC_2831 hypothetical protein
YP_781872.1	KEGG: rru:Rru_A0400 hypothetical protein
YP_781873.1	PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rpa:RPA2480 hypothetical protein
YP_781874.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpa:RPA1816 putative outer membrane receptor for iron transport
YP_781875.1	KEGG: rpb:RPB_3553 hypothetical protein
YP_781876.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpc:RPC_2833 DEAD/DEAH box helicase-like
YP_781877.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_2834 diguanylate cyclase (GGDEF domain)
YP_781878.1	PFAM: transposase, IS4 family protein; KEGG: sth:STH2086 transposase
YP_781879.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: nwi:Nwi_1659 HesB/YadR/YfhF
YP_781880.1	PFAM: protein of unknown function DUF59; KEGG: rpc:RPC_2836 protein of unknown function DUF59
YP_781881.1	TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rpc:RPC_2837 cysteine desulfurases, SufS subfamily
YP_781882.1	TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: rpc:RPC_2838 FeS assembly protein SufD
YP_781883.1	KEGG: rpc:RPC_2839 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase
YP_781884.1	KEGG: rpb:RPB_2993 hypothetical protein
YP_781885.1	with SufCD activates cysteine desulfurase SufS
YP_781886.1	PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rpc:RPC_2842 aminotransferase, class V
YP_781887.1	KEGG: rpc:RPC_2843 hypothetical protein
YP_781888.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_781889.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_781890.1	KEGG: rpc:RPC_2847 hypothetical protein
YP_781891.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpb:RPB_3002 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_781892.1	PFAM: peptidase M23B; KEGG: rpc:RPC_2849 peptidase M23B
YP_781893.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: rpd:RPD_2445 peptide chain release factor 2
YP_781894.1	KEGG: rpc:RPC_2852 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase
YP_781895.1	PFAM: cell wall hydrolase/autolysin; KEGG: rpc:RPC_2853 N-acetylmuramoyl-L-alanine amidase
YP_781896.1	TIGRFAM: ribonuclease, Rne/Rng family; KEGG: rpc:RPC_2854 ribonuclease, Rne/Rng family
YP_781897.1	PFAM: aminotransferase, class I and II; Allinase-like; KEGG: rpc:RPC_2860 aminotransferase, class I and II
YP_781898.1	PFAM: peptidase M48, Ste24p; KEGG: rpc:RPC_2861 peptidase M48, Ste24p
YP_781899.1	PFAM: alpha/beta hydrolase fold; KEGG: atc:AGR_C_2897 hypothetical protein
YP_781900.1	PFAM: DSBA oxidoreductase; KEGG: rpc:RPC_2862 DsbA oxidoreductase
YP_781902.1	PFAM: protein of unknown function DUF1236; KEGG: rpc:RPC_2866 protein of unknown function DUF1236
YP_781903.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_781904.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rpc:RPC_2868 acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_781905.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_781906.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: rpc:RPC_2870 multi-sensor signal transduction histidine kinase
YP_781907.1	PFAM: response regulator receiver; KEGG: rpc:RPC_2871 response regulator receiver domain protein (CheY-like)
YP_781908.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rpc:RPC_2872 signal transduction histidine kinase
YP_781909.1	KEGG: rpd:RPD_2427 hypothetical protein
YP_781910.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpc:RPC_2874 radical SAM
YP_781911.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_781912.1	KEGG: rpc:RPC_2883 hypothetical protein
YP_781913.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rpd:RPD_2420 alpha/beta hydrolase fold-3
YP_781914.1	KEGG: rpc:RPC_2927 hypothetical protein
YP_781915.1	KEGG: bja:blr4700 putative outer-membrane immunogenic protein precursor
YP_781916.1	PFAM: protein of unknown function DUF1211; KEGG: mhu:Mhun_0814 protein of unknown function DUF1211
YP_781917.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: rpb:RPB_3153 adenylate/guanylate cyclase
YP_781918.1	KEGG: rpb:RPB_3154 hypothetical protein
YP_781919.1	KEGG: rpb:RPB_3155 hypothetical protein
YP_781920.1	KEGG: rpb:RPB_3156 hypothetical protein
YP_781921.1	KEGG: rpc:RPC_2938 hypothetical protein
YP_781922.1	KEGG: rpd:RPD_2665 hypothetical protein
YP_781923.1	KEGG: rpc:RPC_2654 hypothetical protein
YP_781924.1	PFAM: regulatory protein, MarR; KEGG: rpb:RPB_2626 transcriptional regulator, MarR family
YP_781925.1	KEGG: bja:blr5037 delta_aminolevulinic acid dehydratase
YP_781926.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_781927.1	PFAM: RDD domain containing protein; KEGG: rpc:RPC_2650 RDD
YP_781928.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_781929.1	PFAM: Transglycosylase-associated protein; KEGG: mlo:msr2497 hypothetical protein
YP_781930.1	PFAM: SOUL heme-binding protein; KEGG: ccr:CC2549 hypothetical protein
YP_781931.1	PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: bja:bll6988 hypothetical protein
YP_781932.1	TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: rpc:RPC_2648 NRAMP family Mn2+/Fe2+ transporters
YP_781933.1	KEGG: rpa:RPA2705 hypothetical protein
YP_781934.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_781935.1	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA
YP_781936.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpd:RPD_0337 chemotaxis sensory transducer
YP_781937.1	KEGG: rpc:RPC_2642 hypothetical protein
YP_781938.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_781939.1	PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: rpc:RPC_2640 ribonuclease III
YP_781940.1	KEGG: rpb:RPB_2611 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B
YP_781941.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_781942.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_781943.1	KEGG: rpc:RPC_2635 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region
YP_781944.1	Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_781945.1	PFAM: protein of unknown function DUF88; KEGG: rpc:RPC_2633 protein of unknown function DUF88
YP_781946.1	PFAM: Uracil-DNA glycosylase superfamily; KEGG: rpa:RPA2690 possible uracil-DNA glycosylase
YP_781947.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_781948.1	TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: bja:bll5071 mechanosensitive channel homolog
YP_781949.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_781950.1	PFAM: protein of unknown function UPF0074; KEGG: rpc:RPC_2628 transcriptional regulator, BadM/Rrf2 family
YP_781951.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_2627 UbiE/COQ5 methyltransferase
YP_781952.1	PFAM: Cupin 2, conserved barrel domain protein; KEGG: rpc:RPC_2626 cupin 2, conserved barrel
YP_781953.1	PFAM: Dimethylmenaquinone methyltransferase; KEGG: rpc:RPC_2625 dimethylmenaquinone methyltransferase
YP_781954.1	TIGRFAM: conserved hypothetical protein; PFAM: Allophanate hydrolase subunit 1; KEGG: rpc:RPC_2624 hypothetical protein
YP_781955.1	TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: rpc:RPC_2623 allophanate hydrolase subunit 2
YP_781956.1	PFAM: LamB/YcsF family protein; KEGG: rpa:RPA2681 possible lactam utilization protein
YP_781957.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_781958.1	PFAM: protein of unknown function DUF344; KEGG: ana:alr2191 hypothetical protein
YP_781959.1	PFAM: transposase, IS4 family protein; KEGG: atc:AGR_L_863gl hypothetical protein
YP_781961.1	KEGG: bja:bll1305 hypothetical protein
YP_781962.1	TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: rpc:RPC_2944 peptide chain release factor 3
YP_781963.1	PFAM: small multidrug resistance protein; KEGG: rpc:RPC_2945 small multidrug resistance protein
YP_781964.1	PFAM: phosphate transporter; KEGG: rpd:RPD_2335 phosphate transporter
YP_781965.1	PFAM: protein of unknown function DUF47; KEGG: rpc:RPC_2947 protein of unknown function DUF47
YP_781966.1	KEGG: rpc:RPC_2948 hypothetical protein
YP_781967.1	KEGG: rpc:RPC_2950 hypothetical protein
YP_781968.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_2332 inner-membrane translocator
YP_781969.1	PFAM: inner-membrane translocator; KEGG: rpc:RPC_2952 inner-membrane translocator
YP_781970.1	KEGG: bja:blr4039 ABC transporter substrate-binding protein
YP_781971.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_2954 ABC transporter related
YP_781972.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA2275 putative branched-chain amino acid transport system ATP-binding protein
YP_781974.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_781975.1	TIGRFAM: conserved hypothetical protein; PFAM: arsenate reductase and related; KEGG: rpa:RPA2272 hypothetical protein
YP_781977.1	PFAM: PspA/IM30 family protein; KEGG: ret:RHE_CH03136 hypothetical protein
YP_781978.1	PFAM: LemA family protein; KEGG: bja:bll2494 lemA protein
YP_781979.1	PFAM: peptidase M48, Ste24p; KEGG: rpa:RPA4495 possible protease htpX homolog
YP_781980.1	KEGG: rpa:RPA2269 putative flavoprotein involved in K+ transport
YP_781981.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: rpa:RPA2070 hypothetical protein
YP_781982.1	KEGG: rpa:RPA2069 hypothetical protein
YP_781983.1	KEGG: rpa:RPA2068 hypothetical protein
YP_781984.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpa:RPA4459 putative flavocytochrome c sulfide dehydrogenase, flavoprotein subunit
YP_781985.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpd:RPD_4248 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_781986.1	KEGG: rpb:RPB_4365 cytochrome subunit of sulfide dehydrogenase
YP_781987.1	PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: rpd:RPD_4250 protein of unknown function DUF395, YeeE/YedE
YP_781988.1	PFAM: cytochrome c, class I; KEGG: rpa:RPA4463 possible cytochrome
YP_781989.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: oxidoreductase, molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: rpd:RPD_4252 twin-arginine translocation pathway signal
YP_781990.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: 5'-Nucleotidase domain protein; KEGG: rpb:RPB_4369 twin-arginine translocation pathway signal
YP_781991.1	KEGG: rpd:RPD_4254 putative sulfur oxidation protein SoxZ
YP_781992.1	with SoxZ catalyzes the oxidation of sulfur compounds
YP_781993.1	KEGG: rpd:RPD_4256 hypothetical protein
YP_781994.1	KEGG: rpd:RPD_4257 hypothetical protein
YP_781995.1	PFAM: protein of unknown function DUF336; KEGG: rpd:RPD_4258 protein of unknown function DUF336
YP_781996.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_4375 twin-arginine translocation pathway signal
YP_781997.1	PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: rpd:RPD_4260 cytochrome c biogenesis protein, transmembrane region
YP_781998.1	KEGG: rpd:RPD_4261 hypothetical protein
YP_781999.1	PFAM: regulatory protein, ArsR; KEGG: rpd:RPD_4262 regulatory protein, ArsR
YP_782000.1	PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: rpb:RPB_4379 protein of unknown function DUF395, YeeE/YedE
YP_782001.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpb:RPB_4311 4Fe-4S ferredoxin, iron-sulfur binding
YP_782002.1	PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: bbr:BB4314 putative inner membrane transport protein
YP_782003.1	PFAM: cytochrome c, class II; KEGG: rpa:RPA2314 cytochrome c556
YP_782004.1	PFAM: cytochrome B561; KEGG: rpa:RPA2315 putative nickel-dependent hydrogenase, b-type cytochrome subunit
YP_782006.1	KEGG: rpb:RPB_3172 hypothetical protein
YP_782007.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_782008.1	PFAM: Ferritin, Dps family protein; KEGG: rpa:RPA2755 possible DNA-binding stress protein
YP_782009.1	KEGG: rpd:RPD_3790 hypothetical protein
YP_782010.1	KEGG: rpc:RPC_0426 hypothetical protein
YP_782011.1	PFAM: FMN-binding domain protein; KEGG: rpb:RPB_3141 FMN-binding
YP_782012.1	reduces nitrous oxide to nitrogen
YP_782013.1	PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: rpb:RPB_3143 periplasmic copper-binding
YP_782014.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_3144 ABC transporter related
YP_782015.1	KEGG: rpb:RPB_3145 nitrous oxide metabolic protein
YP_782016.1	PFAM: NosL family protein; KEGG: rpc:RPC_0432 NosL
YP_782017.1	PFAM: ApbE family lipoprotein; KEGG: rpb:RPB_3147 twin-arginine translocation pathway signal
YP_782018.1	KEGG: rpc:RPC_2980 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL
YP_782019.1	TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein; KEGG: rpc:RPC_1081 pyruvate formate-lyase activating
YP_782020.1	TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: bja:blr1228 guanylate kinase
YP_782021.1	TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; KEGG: rpb:RPB_4095 phosphonate metabolism PhnM
YP_782022.1	KEGG: rpb:RPB_4094 phosphonate C-P lyase system, PhnL; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase
YP_782023.1	KEGG: rpd:RPD_3829 phosphonate C-P lyase system, PhnK; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase
YP_782024.1	PFAM: phosphonate metabolism PhnJ; KEGG: rpb:RPB_4092 phosphonate metabolism PhnJ
YP_782025.1	PFAM: phosphonate metabolism; KEGG: rpd:RPD_3827 phosphonate metabolism
YP_782026.1	PFAM: phosphonate metabolism; KEGG: rpb:RPB_4090 phosphonate metabolism
YP_782027.1	PFAM: phosphonate metabolism PhnG; KEGG: rpd:RPD_3825 phosphonate metabolism PhnG
YP_782028.1	TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: rpd:RPD_3824 phosphonate C-P lyase system, transcriptional regulator PhnF
YP_782029.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4087 phosphonate uptake transporter
YP_782030.1	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4086 phosphonate uptake transporter
YP_782031.1	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rpb:RPB_4085 phosphonate-binding periplasmic protein
YP_782032.1	KEGG: rpa:RPA0700 PhnC protein, phosphonate ABC transporter, ATP-binding component; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_782033.1	KEGG: rpc:RPC_4433 putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol)
YP_782034.1	TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rpc:RPC_4434 phosphonate metabolism PhnM
YP_782035.1	PFAM: protein of unknown function DUF1045; KEGG: rpa:RPA0703 hypothetical protein
YP_782036.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_782037.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bja:blr4212 putative cell division inhibitor protein
YP_782038.1	blocks the formation of polar Z-ring septums
YP_782039.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_782040.1	PFAM: cobalamin-5-phosphate synthase CobS; KEGG: rpd:RPD_2325 cobalamin 5'-phosphate synthase
YP_782041.1	KEGG: rpb:RPB_3280 hypothetical protein
YP_782042.1	PFAM: periplasmic binding protein; KEGG: rpc:RPC_4256 periplasmic binding protein
YP_782043.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2923 ABC transporter related
YP_782044.1	PFAM: transport system permease protein; KEGG: rpd:RPD_2924 transport system permease protein
YP_782045.1	KEGG: rpc:RPC_1917 MxaD protein, putative
YP_782046.1	SMART: von Willebrand factor, type A; KEGG: rpc:RPC_1916 von Willebrand factor, type A
YP_782047.1	KEGG: rpc:RPC_1915 hypothetical protein
YP_782048.1	PFAM: von Willebrand factor, type A; KEGG: rpc:RPC_1914 von Willebrand factor, type A
YP_782049.1	KEGG: rpc:RPC_1913 MxaA protein, putative
YP_782050.1	KEGG: rpc:RPC_1912 hypothetical protein
YP_782051.1	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_1911 ATPase associated with various cellular activities, AAA_3
YP_782052.1	PFAM: methanol dehydrogenase, beta subunit; KEGG: rpc:RPC_1910 methanol dehydrogenase, beta subunit
YP_782053.1	PFAM: cytochrome c, class I; KEGG: rpc:RPC_1909 cytochrome c, class I
YP_782054.1	SMART: extracellular solute-binding protein, family 3; KEGG: rpc:RPC_1908 extracellular solute-binding protein, family 3
YP_782055.1	PFAM: Pyrrolo-quinoline quinone; KEGG: rpc:RPC_1907 pyrrolo-quinoline quinone
YP_782056.1	KEGG: rpc:RPC_1906 hypothetical protein
YP_782057.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_1905 putative signal transduction histidine kinase
YP_782058.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rpc:RPC_1904 two component transcriptional regulator, LuxR family
YP_782059.1	PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0350 ferric uptake regulator, FUR family
YP_782060.1	TIGRFAM: TonB family protein; KEGG: rpa:RPA2129 possible energy transducer TonB, C-terminal region
YP_782061.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpa:RPA2128 biopolymer transport protein ExbD/TolR
YP_782062.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpa:RPA2127 putative exbB, uptake of enterochelin; tonB-dependent uptake of B colicins
YP_782063.1	PFAM: protein of unknown function DUF1008; KEGG: rpc:RPC_1975 protein of unknown function DUF1008
YP_782064.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rpc:RPC_1974 antibiotic biosynthesis monooxygenase
YP_782065.1	TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpc:RPC_1973 TonB-dependent haem/haemoglobin receptor
YP_782066.1	PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: rpc:RPC_1972 NmrA-like
YP_782067.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_782068.1	KEGG: rpc:RPC_1970 hypothetical protein
YP_782069.1	PFAM: periplasmic binding protein; KEGG: rpc:RPC_1969 periplasmic binding protein
YP_782070.1	PFAM: transport system permease protein; KEGG: rpc:RPC_1968 transport system permease protein
YP_782071.1	with HmuTU is involved in the transport of hemin
YP_782073.1	KEGG: rpc:RPC_3616 hypothetical protein
YP_782074.1	KEGG: bja:blr8041 hypothetical protein
YP_782076.1	PFAM: protein of unknown function DUF155; KEGG: nha:Nham_0703 protein of unknown function DUF155
YP_782077.1	KEGG: bur:Bcep18194_B2635 hypothetical protein
YP_782078.1	TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: sme:SMb21184 putative acetate kinase (acetokinase) protein
YP_782079.1	PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rru:Rru_A1468 phosphate butyryltransferase
YP_782080.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_1256 enoyl-(acyl carrier protein) reductase
YP_782081.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA2052 putative phophinothricin N-acetyltransferase
YP_782082.1	PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: rpa:RPA2051 putative ornithine decarboxylase
YP_782085.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
YP_782086.1	PFAM: protein of unknown function DUF208; KEGG: rpc:RPC_3509 protein of unknown function DUF208
YP_782087.1	KEGG: rpc:RPC_3510 methylisocitrate lyase
YP_782088.1	PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_3513 thioesterase superfamily
YP_782089.1	PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: rpc:RPC_3514 transcriptional regulator, XRE family
YP_782090.1	TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: rpc:RPC_3515 ribonucleoside-triphosphate reductase, anaerobic-like
YP_782091.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_782092.1	PFAM: ribonucleotide reductase; KEGG: rpc:RPC_3518 ribonucleoside-diphosphate reductase
YP_782093.1	KEGG: zmo:ZMO1201 glycine/serine hydroxymethyltransferase
YP_782094.1	KEGG: rpd:RPD_3220 hypothetical protein
YP_782095.1	PFAM: NLPA lipoprotein; KEGG: rpa:RPA1430 putative outer membrane protein
YP_782096.1	KEGG: rpd:RPD_3222 phenylacetate--CoA ligase
YP_782097.1	TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: rpd:RPD_3223 lipoprotein YaeC
YP_782098.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpd:RPD_3224 binding-protein-dependent transport systems inner membrane component
YP_782099.1	part of the metNIQ transport system for methionine
YP_782100.1	KEGG: rpd:RPD_3226 serine O-acetyltransferase
YP_782101.1	TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; KEGG: rpd:RPD_3227 cysteine desulfurases, SufS subfamily
YP_782102.1	KEGG: rpd:RPD_3228 hypothetical protein
YP_782103.1	PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpa:RPA2617 possible vanadium nitrogenase associated protein VnfN (U51863)
YP_782104.1	PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpa:RPA2616 possible nitrogenase iron-molybdenum cofactor biosynthesis protein NifE homolog
YP_782105.1	PFAM: NifH/frxC-family protein; KEGG: rpa:RPA2615 putative nitrogenase iron protein (nitrogenase component II) (nitrogenase reductase)
YP_782106.1	PFAM: Radical SAM domain protein; KEGG: rpa:RPA2614 hypothetical protein
YP_782107.1	KEGG: rpa:RPA2608 possible sulfonate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3
YP_782108.1	catalyzes the release of sulfite from alkanesulfonates
YP_782109.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2611 putative aliphatic sulfonate transport membrane component. permease subunit of an ABC transporter
YP_782110.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA2610 aliphatic sulfonate transport ATP-binding protein, subunit of ABC transporter
YP_782111.1	PFAM: flavin reductase domain protein, FMN-binding; KEGG: bja:bll7007 putative oxidoreductase
YP_782112.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: sil:SPO0796 hypothetical protein
YP_782113.1	PFAM: Bile acid:sodium symporter; KEGG: sil:SPO0797 bile acid transporter family protein
YP_782114.1	KEGG: afu:AF2100 acetolactate synthase large subunit
YP_782115.1	PFAM: thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: afu:AF2100 acetolactate synthase large subunit
YP_782116.1	catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source
YP_782117.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: mth:MTH563 succinyl-CoA synthetase alpha chain
YP_782118.1	PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG: ttj:TTHA0538 succinyl-CoA synthetase beta chain
YP_782119.1	KEGG: dsy:DSY0244 hypothetical protein
YP_782120.1	KEGG: pst:PSPTO2423 ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3
YP_782122.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3423 ABC transporter ATP-binding protein
YP_782123.1	PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3424 ABC transporter ATP-binding/permease protein
YP_782124.1	PFAM: inner-membrane translocator; KEGG: bja:bll3425 ABC transporter permease protein
YP_782125.1	KEGG: bja:blr6087 3-hydroxybutyryl-CoA dehydrogenase
YP_782126.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:bll3426 ABC transporter substrate-binding protein
YP_782127.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: eba:ebA2066 putative CoA-transferase protein, (family III)
YP_782128.1	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: eba:ebA2064 large subunit of molybdenum enzyme
YP_782129.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: eba:ebA2063 small Fe/S-containing subunit of molybdenum enzyme
YP_782130.1	PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: eba:ebA2062 medium FAD-binding subunit of molybdenum enzyme
YP_782131.1	PFAM: Hydantoinase B/oxoprolinase; KEGG: eba:ebA2053 hydantoin utilization protein B
YP_782132.1	PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: eba:ebA2051 hydantoin utilization protein A
YP_782133.1	PFAM: AMP-dependent synthetase and ligase; KEGG: eba:ebA2050 putative ADP-producing CoA ligase, similar to feruloyl-CoA synthetase
YP_782134.1	PFAM: Thiolase; KEGG: eba:ebA2049 putative beta-oxoacyl-CoA thiolase
YP_782135.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: eba:ebA2047 transcriptional regulator, GntR family
YP_782136.1	KEGG: bxe:Bxe_B2310 hypothetical protein
YP_782137.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: eba:ebA2055 putative acyl-CoA dehydrogenase
YP_782138.1	TIGRFAM: Methylmalonyl-CoA mutase-like; PFAM: cobalamin B12-binding domain protein; KEGG: eba:ebD52 methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding)
YP_782139.1	KEGG: eba:ebA2060 methylmalonyl-CoA mutase subunit alpha; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase
YP_782140.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: eba:ebA2038 fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase
YP_782141.1	PFAM: Endoribonuclease L-PSP; KEGG: eba:ebA2097 hypothetical protein
YP_782142.1	PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mlr0619 probable acid-CoA ligase
YP_782143.1	PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rso:RS02008 probable oxidoreductase protein
YP_782144.1	catalyzes the conversion of salicylyl-CoA to gentisyl-CoA
YP_782145.1	PFAM: regulatory protein, MarR; KEGG: bja:bll6077 transcriptional regulatory protein
YP_782146.1	PFAM: BLUF domain protein; KEGG: rpc:RPC_2562 BLUF
YP_782147.1	KEGG: sil:SPO2719 hypothetical protein
YP_782148.1	TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: mlo:msl7485 hypothetical protein
YP_782149.1	KEGG: nwi:Nwi_3084 PilT protein
YP_782151.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: sme:SMc00392 hypothetical protein
YP_782152.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: rpc:RPC_2997 filamentous haemagglutinin-like
YP_782153.1	PFAM: FecR protein; KEGG: rpa:RPA1340 probable FecR, iron siderophore sensor protein
YP_782154.1	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: pae:PA0675 probable sigma-70 factor, ECF subfamily
YP_782155.1	KEGG: rpa:RPA1338 hypothetical protein
YP_782156.1	KEGG: bja:bll3896 putative transposase
YP_782157.1	KEGG: rpc:RPC_1899 hypothetical protein
YP_782158.1	KEGG: rpc:RPC_3137 hypothetical protein
YP_782159.1	KEGG: rpa:RPA2264 hypothetical protein
YP_782160.1	PFAM: PilT protein domain protein; KEGG: mlo:mlr5903 plasmid stabilization protein
YP_782161.1	KEGG: atc:AGR_pAT_24 hypothetical protein
YP_782163.1	KEGG: aba:Acid345_4269 hypothetical protein
YP_782164.1	KEGG: oih:OB0176 hypothetical protein
YP_782165.1	KEGG: eba:ebA6352 endonuclease
YP_782166.1	KEGG: aba:Acid345_4266 hypothetical protein
YP_782167.1	PFAM: DNA mismatch endonuclease vsr; KEGG: dvu:DVU2843 DNA mismatch endonuclease Vsr, putative
YP_782168.1	KEGG: aba:Acid345_4264 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase
YP_782169.1	KEGG: plt:Plut_0513 hypothetical protein
YP_782170.1	KEGG: nwi:Nwi_0261 hypothetical protein
YP_782171.1	PFAM: Conjugal transfer TraD family protein; KEGG: rpc:RPC_4518 conjugal transfer TraD
YP_782172.1	KEGG: rpd:RPD_2275 hypothetical protein
YP_782173.1	MobA/MobL family protein
YP_782174.1	PFAM: Prophage CP4-57 regulatory; KEGG: rpc:RPC_4521 phage transcriptional regulator, AlpA
YP_782175.1	PFAM: phage integrase family protein; KEGG: dar:Daro_2336 phage integrase
YP_782176.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_782177.1	PFAM: Fmu (Sun) domain protein; KEGG: rpc:RPC_3064 Fmu (Sun)
YP_782178.1	PFAM: protein of unknown function DUF1123; KEGG: rpb:RPB_3191 protein of unknown function DUF1123
YP_782179.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: rpc:RPC_3068 alcohol dehydrogenase, zinc-binding
YP_782180.1	KEGG: rpc:RPC_3069 hypothetical protein
YP_782181.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_782182.1	KEGG: rpc:RPC_3074 hypothetical protein
YP_782184.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3075 major facilitator superfamily MFS_1
YP_782185.1	PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: rpc:RPC_3081 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_782186.1	PFAM: Ppx/GppA phosphatase; KEGG: rpd:RPD_2258 Ppx/GppA phosphatase
YP_782187.1	PFAM: DoxX family protein; KEGG: rpc:RPC_2341 DoxX
YP_782188.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
YP_782189.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_782190.1	PFAM: protein of unknown function UPF0061; KEGG: rpc:RPC_2335 protein of unknown function UPF0061
YP_782191.1	TIGRFAM: ribonuclease D; PFAM: 3'-5' exonuclease; KEGG: rpc:RPC_2334 ribonuclease D
YP_782192.1	PFAM: protein of unknown function UPF0187; KEGG: rpd:RPD_2950 protein of unknown function UPF0187
YP_782193.1	PFAM: Ppx/GppA phosphatase; KEGG: rpc:RPC_2330 Ppx/GppA phosphatase
YP_782194.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_782195.1	KEGG: rpc:RPC_2328 chromosomal replication initiator, DnaA
YP_782196.1	PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpc:RPC_2327 CDP-alcohol phosphatidyltransferase
YP_782197.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_782198.1	TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: rpc:RPC_2325 phosphoribosylglycinamide formyltransferase
YP_782199.1	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rpa:RPA3053 cold shock DNA binding protein
YP_782200.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_782201.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nha:Nham_2336 ABC transporter related
YP_782202.1	KEGG: rpc:RPC_2316 hypothetical protein
YP_782203.1	binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
YP_782204.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_782205.1	PFAM: permease YjgP/YjgQ family protein; KEGG: rpc:RPC_2313 permease YjgP/YjgQ
YP_782206.1	PFAM: permease YjgP/YjgQ family protein; KEGG: rpc:RPC_2312 permease YjgP/YjgQ
YP_782207.1	PFAM: Organic solvent tolerance protein; KEGG: rpc:RPC_2311 organic solvent tolerance protein
YP_782208.1	KEGG: rpc:RPC_2310 hypothetical protein
YP_782209.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_782210.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_782211.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_2307 alcohol dehydrogenase, zinc-binding
YP_782212.1	KEGG: rpc:RPC_2306 hypothetical protein
YP_782213.1	KEGG: rpa:RPA1461 hypothetical protein
YP_782214.1	Essential for recycling GMP and indirectly, cGMP
YP_782215.1	TIGRFAM: conserved hypothetical protein; PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: rpc:RPC_2304 conserved hypothetical protein 255
YP_782216.1	PFAM: aminodeoxychorismate lyase; KEGG: rpc:RPC_2303 aminodeoxychorismate lyase
YP_782217.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_782218.1	carries the fatty acid chain in fatty acid biosynthesis
YP_782219.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_2300 3-oxoacyl-(acyl-carrier-protein) reductase
YP_782220.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: bja:blr4082 malonyl-CoA:acyl carrier protein transacylase
YP_782221.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpa:RPA3076 putative diguanylate cyclase (GGDEF)
YP_782222.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_782223.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_782224.1	KEGG: rpd:RPD_3944 hypothetical protein
YP_782225.1	KEGG: rpd:RPD_2164 hypothetical protein
YP_782226.1	KEGG: rpd:RPD_2163 hypothetical protein
YP_782227.1	KEGG: rpc:RPC_2294 hypothetical protein
YP_782228.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_782229.1	KEGG: rpd:RPD_2989 hypothetical protein
YP_782230.1	unwinds double stranded DNA
YP_782231.1	KEGG: rru:Rru_A0502 hypothetical protein
YP_782232.1	KEGG: rpa:RPA3084 replicative DNA helicase (dnaB)
YP_782233.1	PFAM: protein of unknown function DUF214; KEGG: dde:Dde_0827 ABC transporter, permease protein, putative
YP_782234.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVUA0022 ABC transporter, ATP-binding protein
YP_782235.1	PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_4021 secretion protein HlyD
YP_782236.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpa:RPA2367 two component sensor histidine kinase, possible AdeS
YP_782237.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_2735 two component transcriptional regulator, winged helix family
YP_782238.1	KEGG: ret:RHE_CH02686 hypothetical protein
YP_782239.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpa:RPA2371 putative RND multidrug efflux membrane fusion protein MexA precursor
YP_782240.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpa:RPA2372 RND multidrug efflux transporter MexB
YP_782241.1	KEGG: rpa:RPA2374 hypothetical protein
YP_782242.1	KEGG: rpa:RPA2375 hypothetical protein
YP_782243.1	KEGG: rpa:RPA2374 hypothetical protein
YP_782244.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA2988 GCN5-related N-acetyltransferase
YP_782245.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpb:RPB_2521 diguanylate cyclase
YP_782246.1	KEGG: rpc:RPC_2289 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein
YP_782247.1	PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mlr3150 hypothetical protein
YP_782248.1	KEGG: rpd:RPD_2993 hypothetical protein
YP_782249.1	KEGG: jan:Jann_2415 hypothetical protein
YP_782250.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_782251.1	PFAM: Colicin V production protein; KEGG: rpc:RPC_2283 colicin V production protein
YP_782252.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_782253.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_2281 short-chain dehydrogenase/reductase SDR
YP_782254.1	KEGG: rpd:RPD_1740 hypothetical protein
YP_782255.1	KEGG: rpd:RPD_1256 hypothetical protein
YP_782256.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rpc:RPC_2280 major facilitator superfamily MFS_1
YP_782257.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_782258.1	KEGG: rpc:RPC_2278 hypothetical protein
YP_782259.1	KEGG: rpc:RPC_2277 hypothetical protein
YP_782260.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_782261.1	PFAM: NnrUfamily protein; KEGG: rpc:RPC_2275 NnrU
YP_782262.1	PFAM: Uncharacterized protein UPF0065; KEGG: rpd:RPD_3010 twin-arginine translocation pathway signal
YP_782263.1	KEGG: rpc:RPC_2273 hypothetical protein
YP_782264.1	KEGG: rpc:RPC_2272 hypothetical protein
YP_782266.1	KEGG: rpb:RPB_2441 hypothetical protein
YP_782268.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_782269.1	PFAM: Patatin; KEGG: rpc:RPC_2266 patatin
YP_782270.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA
YP_782271.1	KEGG: rpc:RPC_2263 hypothetical protein
YP_782272.1	KEGG: rpc:RPC_2262 hypothetical protein
YP_782273.1	KEGG: rpb:RPB_2435 hypothetical protein
YP_782274.1	allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain
YP_782275.1	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: rpa:RPA3112 2-nitropropane dioxygenase
YP_782276.1	KEGG: rpc:RPC_2258 hypothetical protein
YP_782277.1	PFAM: cyclase family protein; KEGG: rpd:RPD_3020 putative cyclase
YP_782278.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_2257 transcriptional regulator, TetR family
YP_782279.1	in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever
YP_782280.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_782281.1	PFAM: Auxin Efflux Carrier; KEGG: rpc:RPC_2254 auxin efflux carrier
YP_782282.1	PFAM: cyclic nucleotide-binding; KEGG: bja:bll2244 probable cAMP-regulatory protein
YP_782283.1	PFAM: cyclic nucleotide-binding; KEGG: bja:bll2244 probable cAMP-regulatory protein
YP_782284.1	PFAM: peptidase M15D, vanX D-ala-D-ala dipeptidase; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: rpd:RPD_3026 peptidase M15D, VanX D-ala-D-ala dipeptidase
YP_782285.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_782286.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_782287.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
YP_782289.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rpc:RPC_2244 DNA processing protein DprA, putative
YP_782290.1	KEGG: rpc:RPC_2240 hypothetical protein
YP_782291.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_782292.1	KEGG: rpc:RPC_2238 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein
YP_782293.1	PFAM: protein of unknown function DUF983; KEGG: rpc:RPC_2237 protein of unknown function DUF983
YP_782294.1	PFAM: NUDIX hydrolase; KEGG: rpa:RPA3127 NUDIX hydrolase
YP_782295.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_782296.1	TIGRFAM: methyltransferase FkbM family; KEGG: nmu:Nmul_A1173 methyltransferase FkbM
YP_782297.1	involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP
YP_782298.1	PFAM: response regulator receiver; KEGG: rpc:RPC_3309 response regulator receiver domain protein (CheY-like)
YP_782299.1	KEGG: rpc:RPC_3310 hypothetical protein
YP_782300.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_782302.1	KEGG: rpc:RPC_3312 hypothetical protein
YP_782303.1	PFAM: Endoribonuclease L-PSP; KEGG: nha:Nham_2448 endoribonuclease L-PSP
YP_782304.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rpc:RPC_3314 glycerophosphoryl diester phosphodiesterase
YP_782305.1	PFAM: protein of unknown function DUF482; KEGG: rpc:RPC_3315 protein of unknown function DUF482
YP_782306.1	PFAM: histidine triad (HIT) protein; KEGG: rpc:RPC_3316 histidine triad (HIT) protein
YP_782307.1	PFAM: protein of unknown function UPF0066; KEGG: rpd:RPD_3047 protein of unknown function UPF0066
YP_782308.1	PFAM: branched-chain amino acid transport; KEGG: rpc:RPC_3318 hypothetical protein
YP_782309.1	PFAM: AzlC family protein; KEGG: rpc:RPC_3319 AzlC-like
YP_782310.1	PFAM: type IV pilus assembly PilZ; KEGG: rpb:RPB_2400 hypothetical protein
YP_782311.1	PFAM: Sporulation domain protein; Lytic transglycosylase, catalytic; KEGG: rpc:RPC_3321 lytic transglycosylase, catalytic
YP_782312.1	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine
YP_782313.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
YP_782314.1	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
YP_782315.1	KEGG: rpc:RPC_3323 hypothetical protein
YP_782316.1	KEGG: rpb:RPB_2396 AAA_5 ATPase; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_782317.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: rpc:RPC_3325 ATP-dependent Clp protease adaptor protein ClpS
YP_782318.1	KEGG: nwi:Nwi_1697 hypothetical protein
YP_782319.1	PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: rpc:RPC_3328 serine-type D-Ala-D-Ala carboxypeptidase
YP_782320.1	PFAM: heat shock protein DnaJ domain protein; KEGG: rpc:RPC_3329 heat shock protein DnaJ-like
YP_782321.1	KEGG: rpd:RPD_3060 hypothetical protein
YP_782322.1	TIGRFAM: mobile mystery protein B; PFAM: filamentation induced by cAMP protein Fic; KEGG: atc:AGR_pTi_bx97 hypothetical protein
YP_782323.1	TIGRFAM: mobile mystery protein A; PFAM: helix-turn-helix domain protein; KEGG: atc:AGR_pTi_183 DNA-binding protein
YP_782324.1	KEGG: bja:bll5161 hypothetical protein
YP_782325.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_782326.1	PFAM: Uncharacterised conserved protein UCP032025; KEGG: rpc:RPC_3333 uncharacterised conserved protein UCP032025
YP_782327.1	KEGG: rpc:RPC_3334 hypothetical protein
YP_782328.1	KEGG: rpd:RPD_3069 hypothetical protein
YP_782329.1	PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rpc:RPC_3336 glutathione S-transferase-like
YP_782330.1	KEGG: rpd:RPD_3071 hypothetical protein
YP_782331.1	PFAM: protein of unknown function DUF218; KEGG: rpc:RPC_3338 protein of unknown function DUF218
YP_782332.1	PFAM: aldo/keto reductase; KEGG: rpc:RPC_3339 2,5-didehydrogluconate reductase
YP_782333.1	SMART: helix-turn-helix domain protein; KEGG: rpb:RPB_2380 transcriptional regulator, XRE family
YP_782334.1	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: rpc:RPC_3340 magnesium transporter
YP_782335.1	PFAM: polysaccharide deacetylase; KEGG: rpc:RPC_3341 polysaccharide deacetylase
YP_782336.1	PFAM: polysaccharide deacetylase; KEGG: rpc:RPC_3342 polysaccharide deacetylase
YP_782337.1	KEGG: rpc:RPC_3343 hypothetical protein
YP_782338.1	PFAM: protein of unknown function DUF1234; KEGG: rfr:Rfer_2404 protein of unknown function DUF1234
YP_782339.1	KEGG: rfr:Rfer_2410 citrate lyase ligase; TIGRFAM: cytidyltransferase-related domain; citrate lyase ligase; PFAM: GCN5-related N-acetyltransferase; Citrate lyase ligase, C-terminal domain protein
YP_782340.1	acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate
YP_782341.1	KEGG: rfr:Rfer_2408 citrate lyase, beta subunit; TIGRFAM: citrate lyase, beta subunit; PFAM: HpcH/HpaI aldolase
YP_782342.1	KEGG: rfr:Rfer_2407 citrate lyase, alpha subunit; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase, alpha subunit
YP_782343.1	PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; KEGG: rfr:Rfer_2406 holo-citrate lyase synthase
YP_782344.1	PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: rfr:Rfer_2405 triphosphoribosyl-dephospho-CoA synthase
YP_782345.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rpc:RPC_3345 prevent-host-death protein
YP_782346.1	PFAM: PilT protein domain protein; KEGG: rpd:RPD_3079 PilT protein-like
YP_782347.1	PFAM: surface presentation of antigens (SPOA) protein; KEGG: rpc:RPC_3347 surface presentation of antigens (SpoA) protein
YP_782348.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_782349.1	catalyzes the hydrolysis of acylphosphate
YP_782350.1	KEGG: rpd:RPD_3092 hypothetical protein
YP_782351.1	PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: rpc:RPC_3352 carbamoyl-phosphate synthase L chain, ATP-binding
YP_782352.1	KEGG: rpc:RPC_3354 hypothetical protein
YP_782353.1	KEGG: rpc:RPC_3355 hypothetical protein
YP_782354.1	PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: rpc:RPC_3356 deoxyribodipyrimidine photolyase
YP_782355.1	KEGG: rpd:RPD_3099 hypothetical protein
YP_782356.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_3358 protein of unknown function DUF6, transmembrane
YP_782357.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_3360 diguanylate cyclase (GGDEF domain)
YP_782358.1	KEGG: rpa:RPA3183 hypothetical protein
YP_782360.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: bja:blr4803 two-component hybrid sensor and regulator
YP_782361.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:blr4802 two-component response regulator
YP_782362.1	PFAM: metallophosphoesterase; KEGG: bja:bll8164 hypothetical protein
YP_782363.1	KEGG: bja:bll8165 putative alkaline phosphatase protein
YP_782364.1	KEGG: bja:bll8166 probable phospholipid N-methyltransferase
YP_782365.1	PFAM: response regulator receiver; KEGG: mlo:mll5373 two-component response regulator
YP_782366.1	KEGG: rpa:RPA1360 hypothetical protein
YP_782367.1	PFAM: Lytic transglycosylase, catalytic; KEGG: rpc:RPC_2909 lytic transglycosylase, catalytic
YP_782368.1	KEGG: rpc:RPC_2910 hypothetical protein
YP_782369.1	KEGG: rpc:RPC_2912 hypothetical protein
YP_782370.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpc:RPC_2913 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_782371.1	KEGG: rpc:RPC_2914 hypothetical protein
YP_782372.1	KEGG: rpc:RPC_2915 hypothetical protein
YP_782373.1	KEGG: rpb:RPB_2223 hypothetical protein
YP_782374.1	KEGG: rpc:RPC_2918 hypothetical protein
YP_782375.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpc:RPC_2919 biopolymer transport protein ExbD/TolR
YP_782376.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpc:RPC_2920 MotA/TolQ/ExbB proton channel
YP_782377.1	PFAM: Polypeptide-transport-associated domain protein, ShlB-type; KEGG: rpc:RPC_2921 hemolysin activation/secretion protein
YP_782378.1	PFAM: FecR protein; KEGG: rpc:RPC_2904 putative FecR
YP_782380.1	PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpc:RPC_2905 sigma-24 (FecI-like)
YP_782381.1	TIGRFAM: TonB family protein; KEGG: rpc:RPC_2906 TonB-like
YP_782382.1	PFAM: Secretin/TonB, short N-terminal domain; KEGG: rpc:RPC_2907 secretin/TonB-like protein
YP_782383.1	KEGG: rpa:RPA1344 hypothetical protein
YP_782384.1	KEGG: rpb:RPB_2209 hypothetical protein
YP_782385.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: bur:Bcep18194_B1068 haemagglutinin-like
YP_782386.1	PFAM: FecR protein; KEGG: rpb:RPB_2213 putative FecR
YP_782387.1	PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_2205 sigma-24 (FecI-like)
YP_782388.1	KEGG: rpb:RPB_3129 secretin/TonB, short-like protein
YP_782389.1	PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2796 acriflavin resistance protein
YP_782390.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_2797 secretion protein HlyD
YP_782391.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_2798 transcriptional regulator, TetR family
YP_782392.1	KEGG: rpb:RPB_2247 hypothetical protein
YP_782393.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpd:RPD_2482 TonB-dependent receptor
YP_782395.1	PFAM: protein of unknown function UPF0066; KEGG: rpd:RPD_2481 protein of unknown function UPF0066
YP_782396.1	PFAM: periplasmic binding protein; KEGG: rpd:RPD_2480 periplasmic binding protein
YP_782397.1	PFAM: transport system permease protein; ABC-3 protein; KEGG: rpd:RPD_2479 transport system permease protein
YP_782398.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2478 ABC transporter related
YP_782399.1	KEGG: rpd:RPD_2477 hypothetical protein
YP_782400.1	TIGRFAM: Molybdenum-pterin binding; PFAM: regulatory protein, LysR; TOBE domain protein; KEGG: rpd:RPD_2476 ModE molybdate transport repressor domain
YP_782401.1	KEGG: aba:Acid345_1668 hypothetical protein
YP_782402.1	PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rpc:RPC_4239 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II
YP_782403.1	KEGG: ade:Adeh_2645 cellulose biosynthesis (CelD)-like protein
YP_782404.1	TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: ret:RHE_CH01358 putative teichoic acid biosynthesis, UDP-N-acetyl-D-mannosaminuronic acid transferase protein
YP_782405.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: sme:SMb20458 putative dTDP-glucose 4,6-dehydratase protein
YP_782406.1	PFAM: polysaccharide export protein; KEGG: sme:SMb21073 putative OMA family outer membrane saccharide export protein, similar to ExoF
YP_782407.1	KEGG: rpc:RPC_4235 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein
YP_782408.1	PFAM: lipopolysaccharide biosynthesis; KEGG: ccr:CC0164 hypothetical protein
YP_782409.1	KEGG: aba:Acid345_3798 hypothetical protein
YP_782411.1	KEGG: dge:Dgeo_2667 O-antigen polymerase
YP_782412.1	PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2871 acyltransferase 3
YP_782413.1	PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; KEGG: aba:Acid345_0895 NAD-dependent epimerase/dehydratase
YP_782414.1	PFAM: sugar transferase; KEGG: ret:RHE_CH01359 putative sugar transferase involved in lipopolysaccharide synthesis, UDP-galactose-lipid carriertransferase protein
YP_782415.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: rpc:RPC_4156 UDP-glucose 6-dehydrogenase
YP_782416.1	PFAM: GCN5-related N-acetyltransferase
YP_782417.1	PFAM: GCN5-related N-acetyltransferase
YP_782418.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rru:Rru_A1486 UDP-glucose 4-epimerase
YP_782419.1	PFAM: glycosyl transferase, group 1; KEGG: hma:rrnAC1017 LPS glycosyltransferase
YP_782420.1	PFAM: glycosyl transferase, family 2; KEGG: ade:Adeh_3050 glycosyl transferase, family 2
YP_782421.1	KEGG: nha:Nham_3026 type I secretion system ATPase, PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_782422.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: nha:Nham_3025 type I secretion membrane fusion protein, HlyD
YP_782423.1	PFAM: Hemolysin-type calcium-binding region; KEGG: rpb:RPB_0805 glycerophosphoryl diester phosphodiesterase
YP_782424.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: nha:Nham_3000 two component transcriptional regulator, LuxR family
YP_782426.1	PFAM: transposase IS66; KEGG: mag:amb3325 transposase and inactivated derivative
YP_782427.1	PFAM: IS66 Orf2 family protein; KEGG: mag:amb0402 transposase and inactivated derivative
YP_782428.1	PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr0034 putative transposase
YP_782430.1	KEGG: rpc:RPC_3376 hypothetical protein
YP_782431.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_3378 methyl-accepting chemotaxis sensory transducer
YP_782432.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_3380 methyl-accepting chemotaxis sensory transducer
YP_782433.1	SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: rpa:RPA2404 probable transcriptional regulator, AraC family
YP_782434.1	KEGG: rpc:RPC_3384 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_782435.1	PFAM: Pyrrolo-quinoline quinone; KEGG: rpb:RPB_2355 pyrrolo-quinoline quinone
YP_782436.1	PFAM: NUDIX hydrolase; KEGG: rpd:RPD_3111 NUDIX hydrolase
YP_782437.1	PFAM: dihydrodipicolinate synthetase; KEGG: rpc:RPC_3385 dihydrodipicolinate synthetase
YP_782438.1	PFAM: MaoC domain protein dehydratase; KEGG: rpb:RPB_2352 MaoC-like dehydratase
YP_782439.1	Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
YP_782440.1	KEGG: rpc:RPC_3388 hypothetical protein
YP_782442.1	PFAM: protein of unknown function DUF1295; KEGG: rpd:RPD_3119 protein of unknown function DUF1295
YP_782443.1	KEGG: rpd:RPD_3120 hypothetical protein
YP_782444.1	KEGG: rpa:RPA3197 hypothetical protein
YP_782445.1	PFAM: DNA/RNA non-specific endonuclease; Peptidase S7, flavivirus helicase (NS3); KEGG: mac:MA3330 hypothetical protein
YP_782446.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rru:Rru_A2643 glycerophosphoryl diester phosphodiesterase
YP_782447.1	KEGG: cvi:CV2871 probable hemagglutinin
YP_782450.1	KEGG: rpc:RPC_3396 filamentation induced by cAMP protein Fic
YP_782451.1	PFAM: carboxyl transferase; KEGG: rpc:RPC_3397 carboxyl transferase
YP_782452.1	PFAM: penicillin-binding protein, transpeptidase; KEGG: rpc:RPC_3398 beta-lactamase
YP_782453.1	KEGG: rpc:RPC_3399 type III secretion protein
YP_782454.1	KEGG: rpc:RPC_3400 hypothetical protein
YP_782455.1	PFAM: ATP12 ATPase; KEGG: rpc:RPC_3401 ATP12 ATPase
YP_782456.1	KEGG: rpc:RPC_3402 hypothetical protein
YP_782457.1	TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rpb:RPB_2335 pseudouridine synthase, RluD
YP_782458.1	KEGG: gsu:GSU0552 hypothetical protein
YP_782459.1	KEGG: rpd:RPD_3154 nitroreductase
YP_782460.1	PFAM: nitroreductase; KEGG: rpd:RPD_3154 nitroreductase
YP_782461.1	PFAM: BLUF domain protein; KEGG: rpc:RPC_3406 BLUF
YP_782462.1	KEGG: rpc:RPC_3407 hypothetical protein
YP_782463.1	PFAM: protein of unknown function UPF0047; KEGG: rpa:RPA3218 hypothetical protein
YP_782464.1	PFAM: Choloylglycine hydrolase; KEGG: rpc:RPC_3412 choloylglycine hydrolase
YP_782465.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr2988 hypothetical protein
YP_782466.1	PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpb:RPB_2324 AAA_5 ATPase
YP_782467.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_3417 peptidase S1C, Do
YP_782468.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_3419 alcohol dehydrogenase GroES-like
YP_782469.1	PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rpc:RPC_3420 glutathione-dependent formaldehyde-activating, GFA
YP_782470.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpa:RPA3224 putative short-chain dehydrogenase
YP_782471.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_782472.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_782473.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_782474.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_782475.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_782476.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_782477.1	late assembly protein
YP_782478.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_782479.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_782480.1	binds 5S rRNA along with protein L5 and L25
YP_782481.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_782482.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_782483.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_782484.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_782485.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_782486.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_782487.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_782488.1	one of the stabilizing components for the large ribosomal subunit
YP_782489.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_782490.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_782491.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_782492.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_782493.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_782494.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_782495.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_782496.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_782497.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_782498.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_782499.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_782500.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_782501.2	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_782502.1	KEGG: rpc:RPC_3454 hypothetical protein
YP_782503.1	PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: nha:Nham_1535 monooxygenase, FAD-binding
YP_782504.1	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_3455 ABC transporter related
YP_782505.1	PFAM: amine oxidase; Methyltransferase type 11; KEGG: rpc:RPC_3456 methyltransferase type 11
YP_782506.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_782507.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_782508.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_782509.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_782510.1	KEGG: lpf:lpl2545 hypothetical protein
YP_782512.1	KEGG: rpb:RPB_2282 hypothetical protein
YP_782513.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpc:RPC_3464 twin-arginine translocation pathway signal
YP_782514.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rpb:RPB_2280 (2Fe-2S)-binding protein
YP_782515.1	PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rpb:RPB_2279 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_782516.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_782517.1	binds directly to 23S ribosomal RNA
YP_782518.1	Modulates Rho-dependent transcription termination
YP_782519.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_782520.1	PFAM: Rare lipoprotein A; nuclease (SNase domain protein); KEGG: rpa:RPA2332 rare lipoprotein A:Staphylococcus nuclease (SNase-like)
YP_782521.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_3475 methyl-accepting chemotaxis sensory transducer
YP_782522.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_782523.1	PFAM: beta-lactamase; KEGG: rpb:RPB_2265 beta-lactamase
YP_782524.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_3478 short-chain dehydrogenase/reductase SDR
YP_782525.1	PFAM: Phosphoglycerate mutase; KEGG: rpc:RPC_3479 phosphoglycerate mutase
YP_782526.1	PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpd:RPD_3208 short-chain dehydrogenase/reductase SDR
YP_782528.1	PFAM: aminoglycoside phosphotransferase; KEGG: rpb:RPB_2261 aminoglycoside phosphotransferase
YP_782529.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA3289 acyl-CoA dehydrogenase
YP_782530.1	PFAM: regulatory protein, TetR; KEGG: rpd:RPD_3211 regulatory protein, TetR
YP_782531.1	KEGG: rpb:RPB_2764 hypothetical protein
YP_782532.1	KEGG: rpc:RPC_3484 hypothetical protein
YP_782533.1	PFAM: alpha/beta hydrolase fold; KEGG: rpb:RPB_2975 alpha/beta hydrolase
YP_782534.1	TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rpc:RPC_3639 cysteine synthase A
YP_782535.1	KEGG: rpb:RPB_2807 hypothetical protein
YP_782536.1	KEGG: rpc:RPC_0102 hypothetical protein
YP_782537.1	KEGG: rpc:RPC_4603 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_782538.1	PFAM: CheC domain protein; KEGG: rpc:RPC_4604 CheC, inhibitor of MCP methylation
YP_782539.1	PFAM: response regulator receiver; KEGG: rpc:RPC_4605 response regulator receiver domain protein (CheY-like)
YP_782540.1	KEGG: rpc:RPC_4606 hypothetical protein
YP_782541.1	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rpc:RPC_4607 CheA signal transduction histidine kinases
YP_782542.1	PFAM: response regulator receiver; KEGG: rpc:RPC_4608 response regulator receiver domain protein (CheY-like)
YP_782543.1	PFAM: MCP methyltransferase, CheR-type; KEGG: rpc:RPC_4609 MCP methyltransferase, CheR-type
YP_782544.1	PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rpc:RPC_4610 PBS lyase heat-like repeat
YP_782545.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: rpc:RPC_4611 response regulator receiver (CheY-like) modulated CheB methylesterase
YP_782546.1	PFAM: CheW domain protein; KEGG: rpc:RPC_4612 CheW protein
YP_782547.1	PFAM: chemotaxis sensory transducer; KEGG: rpc:RPC_4613 methyl-accepting chemotaxis sensory transducer
YP_782548.1	PFAM: CheC domain protein; KEGG: rpc:RPC_4614 CheC, inhibitor of MCP methylation
YP_782549.1	TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rpc:RPC_4597 ribonuclease BN, putative
YP_782550.1	PFAM: Transglycosylase-associated protein; KEGG: rpc:RPC_2982 transglycosylase-associated protein
YP_782551.1	PFAM: alpha/beta hydrolase fold; KEGG: bja:bll3759 hypothetical protein
YP_782552.1	KEGG: rpa:RPA2078 hypothetical protein
YP_782553.1	PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_4596 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_782554.1	KEGG: rfr:Rfer_2156 malto-oligosyltrehalose synthase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77
YP_782555.1	PFAM: manganese containing catalase; protein of unknown function DUF892; KEGG: bja:bll3758 Mn-containing catalase
YP_782556.1	KEGG: rpd:RPD_0913 hypothetical protein
YP_782557.1	TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpd:RPD_0579 exodeoxyribonuclease III (xth)
YP_782558.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpb:RPB_1505 short-chain dehydrogenase/reductase SDR
YP_782559.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_1223 alcohol dehydrogenase, zinc-binding
YP_782560.1	TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rpd:RPD_0346 oxidoreductase alpha (molybdopterin) subunit
YP_782561.1	KEGG: bja:blr4214 hypothetical protein
YP_782562.1	PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: bxe:Bxe_C1346 putative cyclic beta 1-2 glucan synthetase
YP_782563.1	KEGG: rpd:RPD_1604 hypothetical protein
YP_782564.1	PFAM: HWE histidine kinase; KEGG: rpc:RPC_0615 signal transduction histidine kinase
YP_782565.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: bja:bll2244 probable cAMP-regulatory protein
YP_782566.1	KEGG: nha:Nham_3949 hypothetical protein
YP_782567.1	PFAM: Bile acid:sodium symporter; KEGG: rpd:RPD_3417 bile acid:sodium symporter
YP_782568.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: rpd:RPD_3418 arsenate reductase
YP_782569.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpd:RPD_3419 low molecular weight phosphotyrosine protein phosphatase
YP_782570.1	PFAM: regulatory protein, ArsR; KEGG: rpa:RPA3556 transcriptional regulator, ArsR family, ArsR2
YP_782571.1	KEGG: rpb:RPB_1646 thiol-disulfide isomerase and thioredoxins
YP_782572.1	PFAM: permease; KEGG: rpb:RPB_1645 permease
YP_782573.1	PFAM: regulatory protein, ArsR; KEGG: rpb:RPB_1644 transcriptional regulator, ArsR family
YP_782574.1	PFAM: protein of unknown function DUF892; KEGG: rpc:RPC_3623 protein of unknown function DUF892
YP_782575.1	KEGG: rpc:RPC_3624 hypothetical protein
YP_782576.1	PFAM: transglutaminase domain protein; KEGG: rpc:RPC_3627 transglutaminase-like
YP_782577.1	KEGG: rpc:RPC_3628 hypothetical protein
YP_782578.1	KEGG: rpd:RPD_3216 hypothetical protein
YP_782579.1	PFAM: Carbohydrate-selective porin OprB; KEGG: rpc:RPC_3629 carbohydrate-selective porin OprB
YP_782580.1	KEGG: rpc:RPC_3630 hypothetical protein
YP_782581.1	PFAM: iron permease FTR1; KEGG: rpc:RPC_3631 iron permease FTR1
YP_782582.1	KEGG: rpc:RPC_3632 hypothetical protein
YP_782583.1	KEGG: rpc:RPC_3633 conserved hypothetical membrane antigen
YP_782584.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: bja:blr7343 probable short-chain dehydrogenase
YP_782585.1	PFAM: regulatory protein, TetR; KEGG: fra:Francci3_2475 transcriptional regulator, TetR family
YP_782586.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_0558 alpha/beta hydrolase fold
YP_782587.1	PFAM: Cupin 2, conserved barrel domain protein; KEGG: rpc:RPC_2183 cupin 2, conserved barrel
YP_782588.1	PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: rpc:RPC_2184 ribulose 1 5-bisphosphate carboxylase large subunit-like
YP_782589.1	TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rpd:RPD_1058 ferrous iron transport protein B
YP_782590.1	PFAM: FeoA family protein; KEGG: rpd:RPD_1057 FeoA
YP_782592.1	TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: rpc:RPC_3641 RNA methyltransferase TrmH, group 3
YP_782593.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rpc:RPC_3643 NAD-dependent epimerase/dehydratase
YP_782594.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3644 binding-protein-dependent transport systems inner membrane component
YP_782595.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3645 binding-protein-dependent transport systems inner membrane component
YP_782596.1	PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_3647 ABC transporter related
YP_782597.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_782598.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_3649 short-chain dehydrogenase/reductase SDR
YP_782599.1	PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpc:RPC_3650 short-chain dehydrogenase/reductase SDR
YP_782601.1	PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: rpc:RPC_4481 iron-containing alcohol dehydrogenase
YP_782603.1	KEGG: rpd:RPD_0683 hypothetical protein
YP_782604.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: neu:NE1909 diguanylate cyclase/phosphodiesterase domain 2 (EAL)
YP_782605.1	KEGG: ret:RHE_PB00142 probable insertion sequence transposase protein
YP_782606.1	KEGG: ret:RHE_PB00143 probable insertion sequence transposase protein
YP_782609.1	KEGG: rpc:RPC_3660 hypothetical protein
YP_782610.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpc:RPC_3661 excinuclease ABC, C subunit-like
YP_782611.1	KEGG: bja:bsl6731 hypothetical protein
YP_782612.1	PFAM: glutathione peroxidase; KEGG: rpc:RPC_3665 glutathione peroxidase
YP_782613.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_782614.1	KEGG: rpc:RPC_3667 hypothetical protein
YP_782615.1	KEGG: rpc:RPC_3668 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold
YP_782616.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: bja:blr6749 hypothetical protein
YP_782617.1	catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate
YP_782618.1	similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate
YP_782619.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_782620.1	TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: rpc:RPC_3673 6-phosphogluconolactonase
YP_782621.1	KEGG: rpc:RPC_3674 carbohydrate kinase, thermoresistant glucokinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase
YP_782622.1	TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: rpc:RPC_3675 Cof protein
YP_782623.1	PFAM: glycoside hydrolase 15-related; KEGG: rpc:RPC_3676 glycoside hydrolase 15-related
YP_782624.1	KEGG: rpc:RPC_3677 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77
YP_782625.1	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rpc:RPC_3678 alpha amylase, catalytic region
YP_782626.1	KEGG: rpc:RPC_3679 trehalose synthase-like; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain
YP_782627.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
YP_782628.1	KEGG: rpc:RPC_3681 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain
YP_782629.1	PFAM: MOFRL domain protein; KEGG: rpc:RPC_4629 hydroxypyruvate reductase
YP_782630.1	KEGG: rpc:RPC_3682 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain
YP_782631.1	KEGG: rpc:RPC_3683 hypothetical protein
YP_782632.1	KEGG: bja:blr6772 hypothetical protein
YP_782633.1	catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA
YP_782634.1	PFAM: Ku domain protein; KEGG: rpc:RPC_3686 Ku
YP_782635.1	KEGG: rpd:RPD_3492 hypothetical protein
YP_782636.1	PFAM: SirA family protein; KEGG: nha:Nham_3129 SirA-like
YP_782637.1	in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis
YP_782638.1	PFAM: Urease accessory protein UreF; KEGG: rpb:RPB_1868 urease accessory protein UreF
YP_782639.1	PFAM: UreE urease accessory domain protein domain protein; UreE urease accessory domain protein; KEGG: rpb:RPB_1867 UreE urease accessory-like
YP_782640.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rpb:RPB_1865 antibiotic biosynthesis monooxygenase
YP_782641.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits
YP_782642.1	PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: rpa:RPA3661 metal dependent phosphohydrolase
YP_782643.1	ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active
YP_782644.1	UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter
YP_782645.1	PFAM: Urease accessory protein UreD; KEGG: bja:blr1453 urease accessory protein
YP_782646.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1798 ABC transporter related
YP_782647.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1797 ABC transporter related
YP_782648.1	PFAM: inner-membrane translocator; KEGG: rpc:RPC_3700 inner-membrane translocator
YP_782649.1	PFAM: inner-membrane translocator; KEGG: rpc:RPC_3701 inner-membrane translocator
YP_782650.1	KEGG: rpd:RPD_3510 twin-arginine translocation pathway signal
YP_782651.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpc:RPC_3703 DEAD/DEAH box helicase-like
YP_782652.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_782653.1	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rpa:RPA3672 cold shock DNA binding protein
YP_782654.1	KEGG: rpc:RPC_3706 TadE-like
YP_782655.1	PFAM: TadE family protein; KEGG: rpb:RPB_1789 TadE-like
YP_782657.1	PFAM: Flp/Fap pilin component; KEGG: rpd:RPD_3517 Flp/Fap pilin component
YP_782658.1	PFAM: peptidase A24A, prepilin type IV; KEGG: rpc:RPC_3711 peptidase A24A, prepilin type IV
YP_782659.1	KEGG: rpd:RPD_3519 Flp pilus assembly CpaB
YP_782660.1	PFAM: type II and III secretion system protein; transport-associated; KEGG: rpc:RPC_3713 type II and III secretion system protein
YP_782661.1	Caulobacter-type pilus biogenesis lipoprotein CpaD; TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; KEGG: rpc:RPC_3714 pilus assembly protein CpaD
YP_782662.1	KEGG: rpc:RPC_3715 putative pilus assembly protein CpaE
YP_782663.1	PFAM: type II secretion system protein E; KEGG: rpc:RPC_3716 type II secretion system protein E
YP_782664.1	PFAM: type II secretion system protein; KEGG: rpc:RPC_3717 type II secretion system protein
YP_782665.1	PFAM: type II secretion system protein; KEGG: rpc:RPC_3718 type II secretion system protein
YP_782666.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpc:RPC_3719 tetratricopeptide TPR_2
YP_782667.1	PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: rpc:RPC_3720 leucyl aminopeptidase
YP_782668.1	PFAM: NLP/P60 protein; KEGG: bja:bll1430 hypothetical protein
YP_782669.1	TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase; KEGG: rpc:RPC_3722 nucleoside diphosphate pyrophosphatase
YP_782670.1	PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: nwi:Nwi_0292 ABC transporter, ATPase subunit
YP_782671.1	KEGG: rpd:RPD_3531 PilT protein-like
YP_782673.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3726 binding-protein-dependent transport systems inner membrane component
YP_782674.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3727 binding-protein-dependent transport systems inner membrane component
YP_782675.1	PFAM: extracellular solute-binding protein, family 5; KEGG: rpc:RPC_3728 extracellular solute-binding protein, family 5
YP_782676.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: rpc:RPC_3729 extracellular solute-binding protein, family 5
YP_782677.1	PFAM: cytochrome c, class I; KEGG: rpc:RPC_3730 cytochrome c, class I
YP_782678.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_782679.1	catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis
YP_782680.1	PFAM: luciferase family protein; KEGG: rpc:RPC_3733 luciferase-like
YP_782681.1	KEGG: rpb:RPB_1765 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase
YP_782682.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_782683.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: rpc:RPC_2231 glycerol kinase
YP_782684.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_1750 acyl-CoA dehydrogenase-like
YP_782685.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpd:RPD_3550 acyl-CoA dehydrogenase-like
YP_782686.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902
YP_782687.1	KEGG: rpb:RPB_1748 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase
YP_782688.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA3716 pimeloyl-CoA ligase
YP_782689.1	PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: rpb:RPB_1746 enoyl-CoA hydratase
YP_782690.1	PFAM: regulatory proteins, IclR; KEGG: rpc:RPC_2225 transcriptional regulator, IclR family
YP_782691.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr7823 ABC transporter ATP-binding protein
YP_782692.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA3720 putative branched-chain amino acid transport system ATP-binding protein
YP_782693.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_3557 inner-membrane translocator
YP_782694.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_3558 inner-membrane translocator
YP_782695.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_3559 extracellular ligand-binding receptor
YP_782696.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpa:RPA3724 possible high-affinity leucine-isoleucine-valine transport system; periplasmic binding protein
YP_782697.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_3562 putative leucine/isoleucine/valine-binding protein precursor
YP_782698.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_1898 extracellular ligand-binding receptor
YP_782699.1	KEGG: rpc:RPC_2223 hypothetical protein
YP_782700.1	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: rpd:RPD_1895 sodium/hydrogen exchanger
YP_782701.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_1843 methyl-accepting chemotaxis sensory transducer
YP_782702.1	KEGG: rpc:RPC_2220 putative ParA family partition protein
YP_782703.1	PFAM: regulatory protein, MarR; KEGG: rpd:RPD_1893 regulatory protein, MarR
YP_782704.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_1892 inner-membrane translocator
YP_782705.1	PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_3572 branched-chain amino acid transport system ATP-binding protein
YP_782706.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA1791 branched-chain amino acid transport system ATP-binding protein
YP_782707.1	TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: bba:Bd0203 methyl-accepting chemotaxis protein
YP_782708.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpb:RPB_3574 diguanylate cyclase
YP_782709.1	PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7848 probable substrate-binding protein
YP_782710.1	PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_1888 thioesterase superfamily
YP_782711.1	catalyzes the conversion of ferulic acid to feruloyl-CoA
YP_782712.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_782713.1	KEGG: rpb:RPB_3579 hypothetical protein
YP_782714.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpb:RPB_3580 TRAP dicarboxylate transporter DctM subunit
YP_782715.1	KEGG: rpb:RPB_3581 TrapT family, DctQ subunit, C4-dicarboxylate transport
YP_782716.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpb:RPB_3582 TRAP dicarboxylate transporter DctP subunit
YP_782717.1	catalyzes the formation of protocatechuate from 4-hydroxybenzoate
YP_782718.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902
YP_782719.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_2218 transcriptional regulator, LysR family
YP_782720.1	PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: rpc:RPC_2217 pyridoxamine 5'-phosphate oxidase-related, FMN-binding
YP_782721.1	PFAM: protein of unknown function UPF0153; KEGG: bja:blr7852 hypothetical protein
YP_782722.1	KEGG: rpc:RPC_2208 hypothetical protein
YP_782723.1	PFAM: Citrate transporter; KEGG: rpc:RPC_2206 putative Na+/H+ antiporter
YP_782724.1	KEGG: rpc:RPC_2205 hypothetical protein
YP_782725.1	KEGG: rpc:RPC_2204 hypothetical protein
YP_782726.1	PFAM: cyclic nucleotide-binding; KEGG: rpc:RPC_2203 cyclic nucleotide-binding domain (cNMP-BD) protein
YP_782727.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_2202 enoyl-CoA hydratase/isomerase
YP_782728.1	PFAM: nitroreductase; KEGG: rpd:RPD_3603 nitroreductase
YP_782729.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpb:RPB_1689 acyl-CoA dehydrogenase-like
YP_782730.1	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpc:RPC_2197 acyl-CoA dehydrogenase-like
YP_782731.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpd:RPD_3607 AMP-dependent synthetase and ligase
YP_782732.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpa:RPA1705 possible 3-hydroxyacyl-CoA dehydrogenase type II
YP_782733.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_2195 transcriptional regulator, TetR family
YP_782734.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_782735.1	activates fatty acids by binding to coenzyme A
YP_782736.1	PFAM: Resolvase, N-terminal domain; KEGG: mag:amb4514 site-specific recombinase
YP_782737.1	TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: rpc:RPC_4652 outer membrane autotransporter barrel
YP_782738.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bja:bll7902 hypothetical protein
YP_782739.1	PFAM: protein of unknown function DUF1127; KEGG: rpc:RPC_3736 hypothetical protein
YP_782740.1	Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence
YP_782741.1	PFAM: CinA domain protein; KEGG: rpb:RPB_1678 CinA-like
YP_782742.1	KEGG: rpc:RPC_3467 propeptide, PepSY amd peptidase M4
YP_782743.1	KEGG: rpc:RPC_3468 hypothetical protein
YP_782744.1	PFAM: regulatory protein, TetR; KEGG: pol:Bpro_5551 transcriptional regulator, TetR family
YP_782747.1	PFAM: manganese and iron superoxide dismutase; KEGG: rpb:RPB_1677 superoxide dismutase
YP_782748.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3739 major facilitator superfamily MFS_1
YP_782749.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr7775 hypothetical protein
YP_782750.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bja:blr7776 probable cation efflux system protein
YP_782751.1	KEGG: rpd:RPD_3624 hypothetical protein
YP_782752.1	PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: rpb:RPB_0742 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
YP_782753.1	PFAM: histone family protein DNA-binding protein; KEGG: rpc:RPC_3750 histone-like DNA-binding protein
YP_782754.1	PFAM: Phosphoglycerate mutase; KEGG: rpc:RPC_1895 phosphoglycerate mutase
YP_782755.1	TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: rpc:RPC_1894 cobalamin 5'-phosphate synthase
YP_782756.1	SMART: AAA ATPase; KEGG: mlo:mll1902 hypothetical protein
YP_782757.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_3131 ABC transporter related
YP_782758.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_3132 ABC transporter related
YP_782759.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_3133 inner-membrane translocator
YP_782760.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_3134 inner-membrane translocator
YP_782761.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_1944 twin-arginine translocation pathway signal
YP_782762.1	PFAM: histidine triad (HIT) protein; KEGG: rpd:RPD_3136 histidine triad (HIT) protein
YP_782763.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpb:RPB_3149 TonB-dependent receptor
YP_782764.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA0131 putative sulfonate transport system ATP-binding protein
YP_782765.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA0132 ABC sulfonate transport system, permease protein
YP_782766.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpa:RPA0133 ABC sulfate transport system, periplasmic binding protein
YP_782767.1	TIGRFAM: hydrogenases, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: rpa:RPA0134 hydrogenase gamma-fused hydrogenase large and small subunit
YP_782768.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpa:RPA0135 possible oxidoreductase
YP_782769.1	TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: rpc:RPC_1078 acetate kinase
YP_782770.1	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate
YP_782771.1	KEGG: rpc:RPC_3846 hypothetical protein
YP_782772.1	PFAM: cytochrome c oxidase, subunit II; KEGG: rpc:RPC_3849 cytochrome c oxidase, subunit II
YP_782773.1	PFAM: cytochrome c oxidase, subunit I; KEGG: rpc:RPC_3850 cytochrome-c oxidase
YP_782774.1	KEGG: rpc:RPC_3851 hypothetical protein
YP_782775.1	subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_782776.1	subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_782777.1	subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport
YP_782778.1	subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone
YP_782779.1	subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali
YP_782780.2	subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+
YP_782781.1	KEGG: rpc:RPC_3619 hypothetical protein
YP_782782.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rpc:RPC_3620 heavy metal translocating P-type ATPase
YP_782784.1	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpd:RPD_1061 Nif-specific regulatory protein
YP_782785.1	KEGG: rru:Rru_A1390 hypothetical protein
YP_782786.1	KEGG: rru:Rru_A1391 hypothetical protein
YP_782787.1	PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpc:RPC_4681 nitrogenase
YP_782788.1	PFAM: Vanadium/alternative nitrogenase delta subunit; KEGG: rpc:RPC_4682 nitrogenase
YP_782789.1	KEGG: rpc:RPC_4683 nitrogenase alpha chain; TIGRFAM: nitrogenase alpha chain; nitrogenase component I, alpha chain; nitrogenase iron-iron protein, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1
YP_782790.1	nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; alternative NifH, may be molybdenum-independent
YP_782791.1	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_0884 transcriptional regulator, NifA subfamily, fis family
YP_782792.1	KEGG: rpc:RPC_3754 hypothetical protein
YP_782793.1	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: noc:Noc_0891 transcriptional regulator, GntRfamily, with aminotransferase domain
YP_782794.1	PFAM: Dinitrogenase reductase ADP-ribosyltransferase; KEGG: rpa:RPA1431 putative NAD+ ADP-ribosyltransferase
YP_782795.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_1931 ABC sulfate transport system, periplasmic binding protein
YP_782796.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_1932 binding-protein-dependent transport systems inner membrane component
YP_782797.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1933 ABC transporter related
YP_782798.1	PFAM: aspartate/glutamate/uridylate kinase; KEGG: rpa:RPA1442 possible uridine monophosphate kinase
YP_782799.1	PFAM: aspartate/glutamate/uridylate kinase; KEGG: rpd:RPD_0592 aspartate/glutamate/uridylate kinase
YP_782800.1	PFAM: cytochrome B561; KEGG: rpc:RPC_4935 cytochrome b561
YP_782801.1	KEGG: rpc:RPC_4934 hypothetical protein
YP_782802.1	KEGG: rpc:RPC_4933 propeptide, PepSY amd peptidase M4
YP_782803.1	PFAM: protein of unknown function DUF125, transmembrane; KEGG: rpa:RPA2784 possible nodulin-related protein
YP_782804.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: rpc:RPC_2762 ferric reductase-like transmembrane component-like
YP_782806.1	KEGG: bja:bll7551 hypothetical protein
YP_782807.1	KEGG: rpa:RPA2786 hypothetical protein
YP_782808.1	KEGG: rpc:RPC_3684 hypothetical protein
YP_782809.1	PFAM: CsbD family protein; KEGG: hch:HCH_05492 hypothetical protein
YP_782810.1	KEGG: pfo:Pfl_2556 GCN5-related N-acetyltransferase
YP_782811.1	KEGG: cvi:CV4319 hypothetical protein
YP_782812.1	PFAM: acyl-protein synthetase, LuxE; KEGG: cvi:CV4318 long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
YP_782813.1	KEGG: cvi:CV4319 hypothetical protein
YP_782814.1	KEGG: gvi:gll2007 putative phenylacetate-CoA ligase
YP_782815.1	PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO2046 integral membrane efflux protein
YP_782816.1	TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: plt:Plut_1039 anti-anti-sigma regulatory factor, SpoIIAA
YP_782817.1	PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sat:SYN_02357 anti-sigma regulatory factor
YP_782818.1	KEGG: sat:SYN_02358 ABC transporter substrate-binding protein
YP_782819.1	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sat:SYN_02359 serine phosphatase RsbU, regulator of sigma subunit
YP_782820.1	PFAM: aldehyde dehydrogenase; KEGG: rpc:RPC_3791 aldehyde dehydrogenase
YP_782821.1	PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: rpb:RPB_3847 glucose-methanol-choline oxidoreductase
YP_782822.1	PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpc:RPC_3793 short-chain dehydrogenase/reductase SDR
YP_782823.1	PFAM: Colicin V production protein; KEGG: rpc:RPC_3794 colicin V production protein
YP_782824.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_3849 short-chain dehydrogenase/reductase SDR
YP_782825.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rpc:RPC_3796 two component transcriptional regulator, LuxR family
YP_782826.1	PFAM: Uncharacterized protein UPF0065; KEGG: rpc:RPC_3797 uncharacterized protein UPF0065
YP_782827.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: rpc:RPC_3798 multi-sensor hybrid histidine kinase
YP_782828.1	PFAM: EAL domain protein; response regulator receiver; KEGG: rpc:RPC_3799 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain)
YP_782829.1	KEGG: rpc:RPC_3800 hypothetical protein
YP_782830.1	PFAM: MCP methyltransferase, CheR-type; KEGG: rpc:RPC_3801 MCP methyltransferase, CheR-type
YP_782831.1	PFAM: CheW domain protein; KEGG: rpc:RPC_3802 CheW protein
YP_782832.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rpc:RPC_3803 CheA signal transduction histidine kinases
YP_782833.1	KEGG: bja:blr2933 probable aerotaxis receptor
YP_782834.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpb:RPB_2250 methyl-accepting chemotaxis sensory transducer
YP_782835.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_3804 methyl-accepting chemotaxis sensory transducer
YP_782836.1	PFAM: response regulator receiver; KEGG: rpc:RPC_3805 response regulator receiver domain protein (CheY-like)
YP_782837.1	PFAM: transport-associated; KEGG: rpc:RPC_3808 transport-associated
YP_782838.1	PFAM: protein kinase; UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rpc:RPC_3809 serine/threonine protein kinase
YP_782839.1	PFAM: metallophosphoesterase; KEGG: rpc:RPC_3810 metallophosphoesterase
YP_782840.1	KEGG: rpc:RPC_3811 hypothetical protein
YP_782841.1	KEGG: rpd:RPD_1487 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_782842.1	TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase, 4VR; KEGG: rpc:RPC_3813 bacteriochlorophyll 4-vinyl reductase
YP_782843.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_782844.1	KEGG: rpc:RPC_3815 hypothetical protein
YP_782845.1	KEGG: rpc:RPC_3816 hypothetical protein
YP_782846.1	PFAM: protein of unknown function DUF156; KEGG: rpc:RPC_3817 protein of unknown function DUF156
YP_782847.1	KEGG: rpc:RPC_3818 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein
YP_782848.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: rpc:RPC_3819 hemerythrin HHE cation binding region
YP_782849.1	PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rpc:RPC_3820 6-pyruvoyl tetrahydropterin synthase and hypothetical protein
YP_782850.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_3822 diguanylate cyclase (GGDEF domain)
YP_782851.1	SMART: N-acetylmuramoyl-L-alanine amidase, family 2
YP_782852.1	KEGG: rpd:RPD_1472 hypothetical protein
YP_782854.1	KEGG: nha:Nham_4512 hypothetical protein
YP_782855.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: nha:Nham_4513 prevent-host-death protein
YP_782856.1	KEGG: ret:RHE_PB00143 probable insertion sequence transposase protein
YP_782857.1	KEGG: ret:RHE_PB00142 probable insertion sequence transposase protein
YP_782858.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA1650 putative ABC transporter, ATP-binding protein
YP_782859.1	PFAM: protein of unknown function DUF214; KEGG: rpa:RPA1649 predicted ABC-type transport systems, involved in lipoprotein release, permease components
YP_782860.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpd:RPD_1469 secretion protein HlyD
YP_782861.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_3829 alpha/beta hydrolase fold
YP_782862.1	KEGG: rpb:RPB_3885 hypothetical protein
YP_782863.1	KEGG: rpc:RPC_3831 hypothetical protein
YP_782864.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
YP_782865.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
YP_782866.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_782867.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
YP_782868.1	PFAM: DoxX family protein; KEGG: rpb:RPB_1514 DoxX
YP_782869.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: rpc:RPC_3837 transcriptional regulator, AsnC family
YP_782870.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: rpc:RPC_3838 thioredoxin reductase
YP_782871.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_3839 transcriptional regulator, LysR family
YP_782872.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rpc:RPC_3840 cobyrinic acid a,c-diamide synthase
YP_782873.1	KEGG: nwi:Nwi_2456 hypothetical protein
YP_782874.1	KEGG: rpb:RPB_1508 hypothetical protein
YP_782875.1	KEGG: rpb:RPB_1507 hypothetical protein
YP_782876.1	PFAM: GPR1/FUN34/yaaH family protein; KEGG: ade:Adeh_0724 GPR1/FUN34/YaaH
YP_782877.1	PFAM: Cache, type 2 domain protein; KEGG: ade:Adeh_3161 cache domain protein
YP_782878.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2389 ABC transporter related
YP_782879.1	KEGG: rpd:RPD_2388 hypothetical protein
YP_782880.1	KEGG: rpd:RPD_2387 hypothetical protein
YP_782881.1	KEGG: rpc:RPC_1925 hypothetical protein
YP_782882.1	TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_2384 4-hydroxybenzoyl-CoA thioesterase
YP_782883.1	TIGRFAM: Twin-arginine translocation pathway signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rpc:RPC_1923 ubiquinol-cytochrome c reductase, iron-sulfur subunit
YP_782884.1	PFAM: transcriptional regulator PadR family protein; KEGG: rpc:RPC_3227 transcriptional regulator, PadR-like family
YP_782885.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_1922 transcriptional regulator, LysR family
YP_782886.1	PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_1921 beta-lactamase-like
YP_782887.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpc:RPC_1920 peroxidase
YP_782888.1	PFAM: protein of unknown function DUF81; KEGG: rpc:RPC_1919 protein of unknown function DUF81
YP_782889.1	PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_2382 thioesterase superfamily
YP_782890.1	KEGG: rpd:RPD_2381 hypothetical protein
YP_782891.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpd:RPD_2380 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_782892.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_1938 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_782893.1	PFAM: acriflavin resistance protein; KEGG: rpc:RPC_3023 acriflavin resistance protein
YP_782894.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_3024 secretion protein HlyD
YP_782895.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_3025 two component transcriptional regulator, winged helix family
YP_782896.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_3026 histidine kinase
YP_782897.1	PFAM: Patatin; KEGG: rpc:RPC_3027 patatin
YP_782898.1	KEGG: rpc:RPC_3028 hypothetical protein
YP_782899.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_3029 two component transcriptional regulator, winged helix family
YP_782900.1	PFAM: phage integrase family protein; KEGG: rpa:RPA4082 possible phage-like integrase
YP_782901.1	KEGG: mca:MCA2964 ISMca1, transposase
YP_782903.1	KEGG: bpa:BPP0921 hypothetical protein
YP_782906.1	PFAM: peptidase S1 and S6, chymotrypsin/Hap
YP_782907.1	KEGG: mca:MCA2145 hypothetical protein
YP_782908.1	KEGG: tcr:506491.20 myosin heavy chain Pfam: DUF593 PCEMA1 DUF827 Fibrinogen_BP TolA Vicilin_N Myosin_tail_1 CASP_C GBP_C Erp_C Laminin_I PROSITE: GLU_RICH
YP_782911.1	KEGG: rpc:RPC_1771 putative transposase
YP_782912.1	KEGG: afm:Afu3g07390 hypothetical protein
YP_782913.1	KEGG: gme:Gmet_1193 hypothetical protein
YP_782914.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: gme:Gmet_1194 hypothetical protein
YP_782916.1	KEGG: rpc:RPC_3891 hypothetical protein
YP_782917.1	PFAM: conjugation TrbI family protein; KEGG: rpc:RPC_3892 conjugation TrbI-like protein
YP_782918.1	PFAM: transposase IS66; KEGG: mag:amb3325 transposase and inactivated derivative
YP_782919.1	PFAM: IS66 Orf2 family protein; KEGG: mag:amb0402 transposase and inactivated derivative
YP_782920.1	PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr0034 putative transposase
YP_782921.1	PFAM: conjugation TrbI family protein; KEGG: rpc:RPC_3892 conjugation TrbI-like protein
YP_782922.1	PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: rpc:RPC_3893 conjugal transfer protein TrbG/VirB9/CagX
YP_782923.1	PFAM: Conjugal transfer protein; KEGG: rpc:RPC_3894 conjugal transfer protein
YP_782924.1	type IV secretion VirB6 family
YP_782925.1	KEGG: rpc:RPC_3896 hypothetical protein
YP_782926.1	KEGG: rpc:RPC_3897 putative conjugal transfer protein TrbJ
YP_782927.1	type IV secretion system VirB4 family
YP_782928.1	PFAM: type IV secretory pathway, VirB3 family protein; KEGG: rpc:RPC_3899 type IV secretory pathway, VirB3-like
YP_782929.1	PFAM: Conjugal transfer protein TrbC; KEGG: rpc:RPC_3900 conjugal transfer protein TrbC
YP_782930.1	PFAM: type II secretion system protein E; KEGG: rpc:RPC_3901 type II secretion system protein E
YP_782931.1	KEGG: rpc:RPC_3902 hypothetical protein
YP_782932.1	type IV secretion VirD4 coupling protein family
YP_782933.1	KEGG: rpc:RPC_3904 hypothetical protein
YP_782935.1	PFAM: Lytic transglycosylase, catalytic; KEGG: rpc:RPC_3905 lytic transglycosylase, catalytic
YP_782936.1	KEGG: rpc:RPC_3906 conjugal transfer protein precursor
YP_782937.1	KEGG: rpc:RPC_3907 hypothetical protein
YP_782938.1	KEGG: rpc:RPC_3908 putative replication protein A
YP_782939.1	KEGG: rpc:RPC_3909 putative transcriptional regulator
YP_782940.1	KEGG: rpc:RPC_3911 hypothetical protein
YP_782941.1	KEGG: rpc:RPC_3912 hypothetical protein
YP_782942.1	KEGG: rpc:RPC_3913 hypothetical protein
YP_782943.1	PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_3914 transcriptional regulator, XRE family
YP_782944.1	PFAM: protein of unknown function DUF736; KEGG: rpc:RPC_3915 protein of unknown function DUF736
YP_782945.1	KEGG: rpc:RPC_3916 hypothetical protein
YP_782946.1	KEGG: rpc:RPC_3917 hypothetical protein
YP_782947.1	KEGG: rpc:RPC_3918 hypothetical protein
YP_782948.1	KEGG: rpc:RPC_3919 probably methylase/helicase
YP_782949.1	PFAM: ParB domain protein nuclease; KEGG: rpc:RPC_3920 ParB-like nuclease
YP_782950.1	PFAM: domain of unknown function DUF1738; KEGG: rpc:RPC_3921 antirestriction protein; ArdC
YP_782951.1	PFAM: histone family protein DNA-binding protein; KEGG: rpc:RPC_3750 histone-like DNA-binding protein
YP_782952.1	KEGG: ret:RHE_PF00101 putative aminotransferase protein
YP_782953.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: psb:Psyr_5115 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
YP_782954.1	PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: nha:Nham_3765 DNA polymerase III, alpha subunit
YP_782955.1	KEGG: gsu:GSU2590 hypothetical protein
YP_782956.1	KEGG: pcr:Pcryo_0195 hypothetical protein
YP_782959.1	KEGG: rpc:RPC_3050 hypothetical protein
YP_782960.1	KEGG: rpc:RPC_3049 hypothetical protein
YP_782961.1	KEGG: dar:Daro_2234 hypothetical protein
YP_782962.1	KEGG: rpd:RPD_2290 ATP-dependent endonuclease of the OLD family-like
YP_782963.1	KEGG: rpd:RPD_2289 superfamily I DNA and RNA helicases-like
YP_782966.1	KEGG: nwi:Nwi_1250 resolvase
YP_782967.1	TIGRFAM: phasin family protein; phasin; KEGG: rpc:RPC_3940 phasin 2
YP_782968.1	TIGRFAM: phasin; KEGG: rpc:RPC_3941 phasin 2
YP_782969.1	KEGG: rpc:RPC_3942 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_782970.1	PFAM: Rv0623 family protein transcription factor; KEGG: rpd:RPD_1446 Rv0623-like transcription factor
YP_782971.1	PFAM: PilT protein domain protein; KEGG: rpd:RPD_1445 PilT protein-like
YP_782972.1	KEGG: rpa:RPA4278 hypothetical protein
YP_782974.1	PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rpc:RPC_3945 transcriptional regulator, Crp/Fnr family
YP_782975.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_2743 methyl-accepting chemotaxis sensory transducer
YP_782976.1	KEGG: rpc:RPC_3946 hypothetical protein
YP_782977.1	KEGG: bja:blr7089 respiratory nitrite reductase; TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3
YP_782978.1	PFAM: protein of unknown function DUF323; KEGG: bja:blr7090 probable periplasmic nitrate reductase
YP_782979.1	PFAM: extracellular solute-binding protein, family 1; KEGG: rpd:RPD_1439 extracellular solute-binding protein, family 1
YP_782980.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3948 binding-protein-dependent transport systems inner membrane component
YP_782981.1	KEGG: ccr:CC2874 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein
YP_782982.1	KEGG: rpb:RPB_1460 hypothetical protein
YP_782983.1	KEGG: rpa:RPA4155 3-oxoadipate CoA-transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_782984.1	KEGG: rpc:RPC_3950 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_782985.1	PFAM: AsmA family protein; KEGG: rpc:RPC_3951 AsmA
YP_782987.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3952 binding-protein-dependent transport systems inner membrane component
YP_782988.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1455 binding-protein-dependent transport systems inner membrane component
YP_782989.1	KEGG: rpc:RPC_3954 spermidine/putrescine ABC transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase
YP_782990.1	KEGG: rpc:RPC_3955 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_782991.1	PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_3956 FAD dependent oxidoreductase
YP_782992.1	KEGG: rpc:RPC_3957 hypothetical protein
YP_782993.1	PFAM: protein of unknown function DUF465; KEGG: rpd:RPD_1426 protein of unknown function DUF465
YP_782994.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_3959 diguanylate cyclase (GGDEF domain)
YP_782995.1	KEGG: rpa:RPA4174 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_782996.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_782997.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_782998.1	PFAM: type IV pilus assembly PilZ
YP_782999.1	KEGG: bja:bll6535 hypothetical protein
YP_783000.1	KEGG: rpc:RPC_3963 hypothetical protein
YP_783001.1	PFAM: sodium/calcium exchanger membrane region; KEGG: rpc:RPC_3965 sodium/calcium exchanger membrane region
YP_783002.1	PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: rpc:RPC_3966 NAD(P) transhydrogenase, beta subunit
YP_783003.1	KEGG: rpc:RPC_3967 NAD(P) transhydrogenase subunit alpha part
YP_783004.1	PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rpc:RPC_3968 NAD(P)(+) transhydrogenase (AB-specific)
YP_783005.1	PFAM: aa3 type cytochrome c oxidase subunit IV; KEGG: rpc:RPC_3969 aa3 type cytochrome c oxidase subunit IV
YP_783006.1	TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rpb:RPB_1433 death-on-curing protein
YP_783007.1	TIGRFAM: putative addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: rpd:RPD_1412 SpoVT/AbrB-like
YP_783008.1	TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: rpc:RPC_3974 peptidase M3B, oligoendopeptidase-related clade 3
YP_783009.1	PFAM: Integral membrane protein TerC; KEGG: rpc:RPC_3975 integral membrane protein TerC
YP_783010.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rpc:RPC_3976 two component, sigma54 specific, transcriptional regulator, fis family
YP_783011.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_3977 peptidoglycan-binding domain 1
YP_783012.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: rpc:RPC_3978 protein of unknown function DUF882
YP_783013.1	KEGG: rpc:RPC_3979 hypothetical protein
YP_783014.1	PFAM: protein of unknown function DUF1244; KEGG: rpb:RPB_1425 protein of unknown function DUF1244
YP_783015.1	PFAM: protein of unknown function DUF1036; KEGG: rpc:RPC_3981 protein of unknown function DUF1036
YP_783016.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_783017.1	PFAM: protein of unknown function UPF0150; KEGG: rpb:RPB_1422 protein of unknown function UPF0150
YP_783018.1	PFAM: OsmC family protein; KEGG: rpc:RPC_3986 OsmC-like protein
YP_783019.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_3987 alpha/beta hydrolase fold
YP_783020.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpc:RPC_3988 tetratricopeptide TPR_2
YP_783021.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif
YP_783023.1	PFAM: Uncharacterized protein UPF0065; KEGG: rpc:RPC_3993 uncharacterized protein UPF0065
YP_783024.1	PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_3994 MaoC-like dehydratase
YP_783025.1	PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_3995 hypothetical protein
YP_783026.1	PFAM: regulatory proteins, IclR; KEGG: rpc:RPC_3996 transcriptional regulator, IclR family
YP_783027.1	PFAM: amidohydrolase 2; KEGG: rpb:RPB_1417 amidohydrolase 2
YP_783028.1	PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rpc:RPC_3997 YbaK/prolyl-tRNA synthetase associated region
YP_783029.1	KEGG: rpc:RPC_3999 hypothetical protein
YP_783030.1	KEGG: rpc:RPC_4000 hypothetical protein
YP_783031.1	PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: rpc:RPC_4001 polysaccharide biosynthesis protein
YP_783032.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA1762 putative acyl-CoA dehydrogenase
YP_783033.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_783034.1	PFAM: ribonuclease H; KEGG: rpc:RPC_4076 ribonuclease H
YP_783035.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine
YP_783036.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_783037.1	PFAM: protein of unknown function DUF1013; KEGG: rpa:RPA4272 hypothetical protein
YP_783038.1	KEGG: rpc:RPC_4080 hypothetical protein
YP_783039.1	PFAM: phosphate-starvation-inducible E; KEGG: rpc:RPC_4082 phosphate-starvation-inducible E
YP_783040.1	KEGG: rpc:RPC_1806 hypothetical protein
YP_783041.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rfr:Rfer_0623 prevent-host-death protein
YP_783042.1	PFAM: PilT protein domain protein; KEGG: bja:bll2434 plasmid stability protein
YP_783043.1	KEGG: rpb:RPB_1318 hypothetical protein
YP_783044.1	KEGG: rpc:RPC_4084 hypothetical protein
YP_783045.1	KEGG: rpc:RPC_4085 hypothetical protein
YP_783046.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_783047.1	KEGG: nha:Nham_4658 hypothetical protein
YP_783048.1	SMART: helix-turn-helix domain protein; KEGG: nha:Nham_4657 transcriptional regulator, XRE family
YP_783049.1	PFAM: NapC/NirT cytochrome c domain protein; KEGG: rpc:RPC_1749 NapC/NirT cytochrome c-like
YP_783050.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: rpc:RPC_1205 cytochrome-c peroxidase
YP_783051.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpa:RPA2957 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL)
YP_783052.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rpc:RPC_4088 beta-lactamase-like
YP_783053.1	Catalyzes the formation of PRPP from ATP and ribose 5-phosphate
YP_783054.1	catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine
YP_783055.1	KEGG: rpc:RPC_4090 hypothetical protein
YP_783056.1	PFAM: aldo/keto reductase; KEGG: rpd:RPD_3895 aldo/keto reductase
YP_783057.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rpc:RPC_4093 hypothetical protein
YP_783058.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpd:RPD_3897 protein of unknown function DUF6, transmembrane
YP_783059.1	KEGG: rpc:RPC_4100 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_783060.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4101 methyl-accepting chemotaxis sensory transducer
YP_783061.1	PFAM: Rubrerythrin; protein of unknown function DUF125, transmembrane; KEGG: rpd:RPD_3902 rubrerythrin
YP_783062.1	KEGG: rpd:RPD_3903 hypothetical protein
YP_783063.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_4105 methyl-accepting chemotaxis sensory transducer
YP_783064.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_4104 methyl-accepting chemotaxis sensory transducer
YP_783065.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_783066.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate
YP_783068.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_4109 GCN5-related N-acetyltransferase
YP_783069.1	PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rpa:RPA4314 possible glutathione S-transferase
YP_783070.1	KEGG: rpa:RPA4315 hypothetical protein
YP_783071.1	KEGG: rpd:RPD_3912 hypothetical protein
YP_783072.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpa:RPA4317 putative fosmidomycin resistance protein
YP_783073.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_783074.1	KEGG: rpc:RPC_4114 hypothetical protein
YP_783075.1	PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: rpd:RPD_3916 L-lactate dehydrogenase (cytochrome)
YP_783076.1	KEGG: rpc:RPC_4117 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein
YP_783077.1	PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_4118 transcriptional regulator, XRE family
YP_783078.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_783079.1	PFAM: protein of unknown function DUF992; KEGG: rpc:RPC_4120 protein of unknown function DUF992
YP_783080.1	PFAM: protein of unknown function DUF992; KEGG: rpc:RPC_4121 protein of unknown function DUF992
YP_783081.1	catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate
YP_783082.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rpc:RPC_4124 glutathione S-transferase-like
YP_783083.1	PFAM: glucose sorbosone dehydrogenase; KEGG: rpc:RPC_4125 glucose sorbosone dehydrogenase
YP_783084.1	PFAM: protein of unknown function DUF486; KEGG: rpc:RPC_4126 protein of unknown function DUF486
YP_783085.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: rpc:RPC_4127 phospholipid/glycerol acyltransferase
YP_783086.1	PFAM: aldo/keto reductase; KEGG: rpc:RPC_4128 aldo/keto reductase
YP_783088.1	KEGG: rpc:RPC_4131 hypothetical protein
YP_783089.1	KEGG: rpc:RPC_4132 hypothetical protein
YP_783090.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_4133 HAD-superfamily hydrolase subfamily IA, variant 3
YP_783091.1	PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rpc:RPC_4134 glutathione S-transferase-like
YP_783092.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rpb:RPB_4144 glutathione S-transferase-like
YP_783093.1	KEGG: bja:bll6206 hypothetical protein
YP_783094.1	PFAM: beta-lactamase domain protein; KEGG: rpb:RPB_4145 beta-lactamase-like
YP_783095.1	KEGG: rpa:RPA4342 hypothetical protein
YP_783096.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_783097.1	PFAM: protein of unknown function DUF1236
YP_783098.1	KEGG: rpd:RPD_3990 hypothetical protein
YP_783099.1	PFAM: protein of unknown function DUF891; KEGG: gme:Gmet_2533 protein of unknown function DUF891
YP_783100.1	KEGG: rpd:RPD_3989 hypothetical protein
YP_783101.1	KEGG: rpa:RPA4344 hypothetical protein
YP_783102.1	PFAM: YcfA family protein; KEGG: rpc:RPC_4143 YcfA-like
YP_783103.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation
YP_783104.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4147 methyl-accepting chemotaxis sensory transducer
YP_783105.1	KEGG: rpc:RPC_4148 hypothetical protein
YP_783107.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: rpc:RPC_4149 NAD-dependent epimerase/dehydratase
YP_783108.1	catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine
YP_783109.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_783110.1	KEGG: rpc:RPC_4155 hypothetical protein
YP_783111.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: rpc:RPC_4156 UDP-glucose 6-dehydrogenase
YP_783112.1	PFAM: TPR repeat-containing protein; peptidase C14, caspase catalytic subunit p20; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5947 hypothetical protein
YP_783113.1	KEGG: rpa:RPA4278 hypothetical protein
YP_783114.1	catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate
YP_783115.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA4025 putative branched-chain amino acid ABC transport system ATP-binding protein
YP_783116.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_1589 ABC transporter related
YP_783117.1	PFAM: inner-membrane translocator; KEGG: bja:bll5951 ABC transporter permease protein
YP_783118.1	PFAM: inner-membrane translocator; KEGG: rpa:RPA4028 possible ABC transport system permease protein
YP_783119.1	PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902
YP_783120.1	PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_1586 twin-arginine translocation pathway signal
YP_783121.1	KEGG: bja:blr5954 hypothetical protein
YP_783122.1	PFAM: glycosyl transferase, family 4; KEGG: rpc:RPC_4162 glycosyl transferase, family 4
YP_783123.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: rpc:RPC_4163 polysaccharide biosynthesis protein CapD
YP_783124.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_783125.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: rpc:RPC_4165 uroporphyrinogen III synthase HEM4
YP_783126.1	KEGG: rpc:RPC_4167 ABC transporter, periplasmic branched chain amino acid binding protein
YP_783127.1	PFAM: inner-membrane translocator; KEGG: rpc:RPC_4168 inner-membrane translocator
YP_783128.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_1578 inner-membrane translocator
YP_783129.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4170 ABC transporter related
YP_783130.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA4038 possible ABC transport system ATP-binding protein
YP_783131.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1561 ABC transporter related
YP_783132.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_1560 AMP-dependent synthetase and ligase
YP_783133.1	PFAM: protein of unknown function DUF559; KEGG: rpb:RPB_1559 protein of unknown function DUF559
YP_783134.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_1568 inner-membrane translocator
YP_783135.1	PFAM: inner-membrane translocator; KEGG: rpc:RPC_4178 inner-membrane translocator
YP_783136.1	KEGG: rpa:RPA4045 possible branched-chain amino acid ABC transport system substrate-binding protein
YP_783137.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1555 ABC transporter related
YP_783138.1	PFAM: glycosyl transferase, group 1; KEGG: bpa:BPP0798 putative glycosyltransferase
YP_783139.1	PFAM: aldehyde dehydrogenase; KEGG: gvi:glr3848 aldehyde dehydrogenase
YP_783140.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr5976 putative oxidoreductase
YP_783141.1	PFAM: N-acetylneuraminic acid synthase, N-terminal domain; KEGG: dre:322780 zgc:77126
YP_783142.1	PFAM: Capsule polysaccharide biosynthesis; KEGG: syn:slr2115 hypothetical protein
YP_783143.1	PFAM: Transketolase domain protein; Transketolase, central region; KEGG: sma:SAV1891 putative transketolase
YP_783144.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: nmu:Nmul_A0410 acylneuraminate cytidylyltransferase
YP_783145.1	TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: sco:SCO4880 transferase
YP_783146.1	PFAM: glycosyl transferase, group 1; KEGG: rpb:RPB_1547 glycosyl transferase, group 1
YP_783147.1	TIGRFAM: methyltransferase FkbM family; KEGG: sma:SAV5730 hypothetical protein
YP_783148.1	KEGG: ret:RHE_CH01595 hypothetical protein
YP_783151.1	PFAM: Cephalosporin hydroxylase; KEGG: pfo:Pfl_1516 cephalosporin hydroxylase
YP_783152.1	PFAM: glycosyl transferase, family 2; KEGG: sco:SCO0398 glycosyl transferase
YP_783153.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0851 ATPase
YP_783154.1	PFAM: ABC-2 type transporter; KEGG: dde:Dde_0841 polysaccharide ABC transporter, permease protein
YP_783155.1	PFAM: glycosyl transferase, group 1; KEGG: ade:Adeh_3057 glycosyl transferase, group 1
YP_783156.1	KEGG: syn:slr2115 hypothetical protein
YP_783157.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sdn:Sden_2654 DegT/DnrJ/EryC1/StrS aminotransferase
YP_783158.1	TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: tbd:Tbd_1881 alpha-D-glucose-1-phosphate cytidylyltransferase
YP_783159.1	TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: yps:YPTB1000 CDP-glucose 4,6-dehydratase
YP_783160.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; KEGG: bms:BRA0438 methyltransferase, putative
YP_783161.1	PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: fra:Francci3_3940 dTDP-4-dehydrorhamnose 3,5-epimerase
YP_783162.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: mag:amb0053 acetyltransferase
YP_783163.1	KEGG: rpa:RPA2578 possible alginate O-acetyltransferase AlgJ
YP_783164.1	PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: bca:BCE0975 alginate O-acetyltransferase, putative
YP_783165.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: gox:GOX1611 GDP-6-deoxy-D-lyxo-4-hexulose reductase
YP_783166.1	TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: nha:Nham_2780 GDP-mannose 4,6-dehydratase
YP_783168.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_4224 major facilitator superfamily MFS_1
YP_783169.1	membrane protein involved in the flagellar export apparatus
YP_783170.1	KEGG: rpc:RPC_4226 hypothetical protein
YP_783171.1	KEGG: rpc:RPC_4227 hypothetical protein
YP_783172.1	PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpc:RPC_4228 sigma-24 (FecI-like)
YP_783173.1	TIGRFAM: flagellar export protein FliJ; KEGG: rpc:RPC_4231 flagellar export FliJ
YP_783174.1	involved in type III protein export during flagellum assembly
YP_783175.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpd:RPD_3672 response regulator receiver
YP_783176.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: dar:Daro_1236 UDP-glucose 4-epimerase
YP_783177.1	KEGG: rpc:RPC_4235 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein
YP_783178.1	PFAM: GtrA family protein; KEGG: rpc:RPC_4236 GtrA-like protein
YP_783179.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B2779 amino acid efflux pump, RhtB family, LysE superfamily
YP_783180.1	SMART: transglutaminase domain protein; KEGG: rpd:RPD_1465 transglutaminase-like
YP_783181.1	KEGG: bja:blr2933 probable aerotaxis receptor; TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein
YP_783182.1	PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rpc:RPC_4239 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II
YP_783183.1	PFAM: N-acylglucosamine 2-epimerase; KEGG: rpc:RPC_4240 N-acylglucosamine 2-epimerase
YP_783184.1	PFAM: MCP methyltransferase, CheR-type; KEGG: rpc:RPC_4243 MCP methyltransferase, CheR-type
YP_783185.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_783186.1	PFAM: response regulator receiver; KEGG: rpc:RPC_4245 response regulator receiver domain protein (CheY-like)
YP_783187.1	PFAM: CheW domain protein; KEGG: rpc:RPC_4246 CheW protein
YP_783188.1	PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rpc:RPC_4247 CheA signal transduction histidine kinases
YP_783189.1	KEGG: rpc:RPC_4248 hypothetical protein
YP_783190.1	PFAM: inositol monophosphatase; KEGG: rpc:RPC_4249 3'(2'),5'-bisphosphate nucleotidase
YP_783191.1	KEGG: rpc:RPC_4250 hypothetical protein
YP_783192.1	PFAM: Uncharacterised conserved protein UCP033924; KEGG: rpc:RPC_4251 uncharacterised conserved protein UCP033924
YP_783193.1	KEGG: rpc:RPC_4252 hypothetical protein
YP_783194.1	PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0350 ferric uptake regulator, FUR family
YP_783195.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1962 ABC transporter related
YP_783196.1	TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rpc:RPC_1961 cobalt ABC transporter CbiQ, permease subunit
YP_783197.1	KEGG: rpc:RPC_1960 hypothetical protein
YP_783198.1	catalyzes the ATP-dependent transport of cobalt
YP_783199.1	KEGG: rpc:RPC_1958 hypothetical protein
YP_783200.1	PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_3521 thioesterase superfamily
YP_783202.1	KEGG: rpa:RPA4081 possible pilus assembly protein cpaB
YP_783203.1	KEGG: rpd:RPD_3686 hypothetical protein
YP_783204.1	thiamine-pyrophosphate requiring enzyme
YP_783205.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_4261 ErfK/YbiS/YcfS/YnhG
YP_783206.1	KEGG: rpc:RPC_4262 hypothetical protein
YP_783207.1	PFAM: peptidase M48, Ste24p; KEGG: rpd:RPD_3691 peptidase M48, Ste24p
YP_783208.1	KEGG: rpd:RPD_3692 hypothetical protein
YP_783209.1	catalyzes the formation of benzaldehyde from benzoylformate
YP_783210.1	KEGG: rpa:RPA1610 hypothetical protein
YP_783211.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rpc:RPC_4266 L-carnitine dehydratase/bile acid-inducible protein F
YP_783212.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA1612 putative acyl-CoA dehydrogenase
YP_783213.1	PFAM: cytochrome P450; KEGG: rpa:RPA1613 putative cytochrome P-450
YP_783214.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_3693 isovaleryl-CoA dehydrogenase
YP_783215.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll7251 putative dehydrogenase
YP_783216.1	PFAM: Hly-III family protein; KEGG: rpc:RPC_4269 Hly-III related proteins
YP_783217.1	PFAM: protein of unknown function DUF463, YcjX family protein; KEGG: rpc:RPC_4270 protein of unknown function DUF463, YcjX-like protein
YP_783218.1	PFAM: conserved hypothetical protein 1620; KEGG: rpc:RPC_4271 conserved hypothetical protein 1620
YP_783219.1	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: nwi:Nwi_3054 cold-shock protein, DNA-binding
YP_783220.1	KEGG: rpc:RPC_4273 hypothetical protein
YP_783221.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain
YP_783222.1	PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rpb:RPB_3947 L-carnitine dehydratase/bile acid-inducible protein F
YP_783223.1	KEGG: rpc:RPC_1336 hypothetical protein
YP_783224.1	PFAM: protein of unknown function DUF477; KEGG: rpc:RPC_1335 protein of unknown function DUF477
YP_783225.1	PFAM: protein of unknown function DUF477; KEGG: rpc:RPC_1334 protein of unknown function DUF477
YP_783226.1	PFAM: LemA family protein; KEGG: rpd:RPD_3714 LemA
YP_783227.1	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpd:RPD_3715 carbon-monoxide dehydrogenase
YP_783228.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_4229 AMP-dependent synthetase and ligase
YP_783229.1	KEGG: rpc:RPC_1349 hypothetical protein
YP_783230.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpb:RPB_4234 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase
YP_783231.1	PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rpd:RPD_4086 glutathione S-transferase-like
YP_783232.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: rpc:RPC_1345 methylated-DNA--protein-cysteine methyltransferase
YP_783233.1	PFAM: glycosyl transferase, group 1; KEGG: rpc:RPC_1342 glycosyl transferase, group 1
YP_783234.1	PFAM: glycosyl transferase, group 1; KEGG: gox:GOX1614 putative hexosyltransferase
YP_783235.1	PFAM: O-antigen polymerase; KEGG: rpc:RPC_1341 O-antigen polymerase
YP_783236.1	KEGG: rpc:RPC_1340 hypothetical protein
YP_783237.1	PFAM: Animal heme peroxidase; KEGG: gvi:glr3599 hypothetical protein
YP_783239.1	PFAM: peptidase M23B; KEGG: rpc:RPC_4275 peptidase M23B
YP_783240.1	KEGG: rpa:RPA4432 NHL repeat
YP_783241.1	PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rpd:RPD_4095 ATPase AAA-2
YP_783242.1	TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4278 hypothetical protein
YP_783243.1	TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_4280 methionine biosynthesis MetW
YP_783244.1	Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine
YP_783245.1	PFAM: Chorismate mutase; KEGG: rpb:RPB_4253 chorismate mutase
YP_783246.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_783247.1	dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate
YP_783249.1	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; Cupin 2, conserved barrel domain protein; KEGG: bxe:Bxe_A1049 transcriptional regulator, AraC family
YP_783250.1	PFAM: Cupin 2, conserved barrel domain protein; KEGG: pca:Pcar_2409 mannose-6-phosphate isomerase-like
YP_783252.1	PFAM: protein of unknown function UPF0150; KEGG: rpb:RPB_4320 protein of unknown function UPF0150
YP_783253.1	PFAM: Mg2+ transporter protein, CorA family protein; KEGG: rpc:RPC_4290 Mg2+ transporter protein, CorA-like
YP_783254.1	PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpb:RPB_1167 ErfK/YbiS/YcfS/YnhG
YP_783255.1	PFAM: Extensin family protein; KEGG: rpc:RPC_4292 extensin-like
YP_783256.1	activates fatty acids by binding to coenzyme A
YP_783257.1	PFAM: protein of unknown function DUF559; KEGG: nwi:Nwi_2534 protein of unknown function DUF559
YP_783258.1	KEGG: rpc:RPC_4295 hypothetical protein
YP_783259.1	PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_4296 beta-lactamase-like
YP_783260.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_1264 acyl-CoA dehydrogenase-like
YP_783261.1	PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: rpc:RPC_4298 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_783262.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rpd:RPD_1262 alkylhydroperoxidase AhpD core
YP_783263.1	KEGG: rpc:RPC_4302 hypothetical protein
YP_783264.1	PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rpc:RPC_4303 transcriptional regulator, Crp/Fnr family
YP_783265.1	SMART: PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_4304 PDZ/DHR/GLGF
YP_783266.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_4756 putative plasmid maintenance system antidote protein, XRE family
YP_783267.1	KEGG: bmb:BruAb1_0096 IlvD, dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase
YP_783268.1	KEGG: rpc:RPC_4320 hypothetical protein
YP_783269.1	PFAM: regulatory protein, LysR; KEGG: rpc:RPC_4319 putative transcriptional regulator, ModE family
YP_783270.1	KEGG: rpc:RPC_4318 ModD protein; TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase
YP_783271.1	KEGG: rpc:RPC_4317 hypothetical protein
YP_783272.1	KEGG: rpc:RPC_4316 hypothetical protein
YP_783273.1	TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: rpc:RPC_4315 nitrogenase-associated protein
YP_783274.1	PFAM: protein of unknown function DUF88; KEGG: rpa:RPA3960 hypothetical protein
YP_783275.1	KEGG: rpb:RPB_1632 hypothetical protein
YP_783276.1	PFAM: OmpA/MotB domain protein; KEGG: rpa:RPA2897 possible chemotaxis protein MotB2
YP_783277.1	KEGG: rpc:RPC_2948 hypothetical protein
YP_783278.1	KEGG: son:SO1571 hypothetical protein
YP_783279.1	KEGG: son:SO1571 hypothetical protein
YP_783280.1	KEGG: lic:LIC13201 adenylate/guanylate cyclase
YP_783282.1	KEGG: bja:bsl0098 hypothetical protein
YP_783284.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC, N-terminal domain; KEGG: rpc:RPC_4305 SUA5/YciO/YrdC/YwlC
YP_783285.1	PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_4322 FAD linked oxidase-like
YP_783286.1	KEGG: nfa:nfa55970 hypothetical protein
YP_783287.1	PFAM: protein of unknown function DUF159; KEGG: rpc:RPC_4325 protein of unknown function DUF159
YP_783288.1	KEGG: rpc:RPC_4326 hypothetical protein
YP_783289.1	PFAM: NUDIX hydrolase; KEGG: rpc:RPC_4327 NUDIX hydrolase
YP_783290.1	TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4328 hypothetical protein
YP_783291.1	KEGG: rpc:RPC_4329 hypothetical protein
YP_783292.1	PFAM: transposase, IS4 family protein; KEGG: sth:STH2086 transposase
YP_783293.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_783294.1	PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: rpc:RPC_4331 glycine cleavage T protein (aminomethyl transferase)
YP_783295.1	KEGG: bja:bll2553 3-methyladenine-DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase
YP_783296.1	KEGG: rpd:RPD_1236 hypothetical protein
YP_783297.1	PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: rpa:RPA1065 metal dependent phosphohydrolase
YP_783298.1	KEGG: rpc:RPC_4334 hypothetical protein
YP_783299.1	KEGG: rpc:RPC_4335 hypothetical protein
YP_783300.1	KEGG: bja:blr5636 hypothetical protein
YP_783301.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: ret:RHE_CH02180 putative adenylate cyclase protein
YP_783302.1	KEGG: rpc:RPC_4336 hypothetical protein
YP_783303.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpd:RPD_1230 alcohol dehydrogenase, zinc-binding
YP_783304.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_783305.1	catalyzes the formation of oxaloacetate from L-aspartate
YP_783306.1	KEGG: rpb:RPB_1105 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_783307.1	KEGG: rpc:RPC_4341 hypothetical protein
YP_783308.1	PFAM: cell wall hydrolase, SleB; KEGG: rpc:RPC_4342 cell wall hydrolase, SleB
YP_783309.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_783310.1	KEGG: rpc:RPC_4344 hypothetical protein
YP_783311.1	PFAM: protein of unknown function DUF1236; KEGG: rpc:RPC_4345 hypothetical protein
YP_783312.1	KEGG: rpd:RPD_1222 hypothetical protein
YP_783313.1	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_783314.1	PFAM: protein of unknown function DUF559; KEGG: rpd:RPD_1220 protein of unknown function DUF559
YP_783315.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_783316.1	KEGG: rpc:RPC_4350 hypothetical protein
YP_783317.1	PFAM: Enoyl-CoA hydratase/isomerase; peptidase S49; KEGG: rpc:RPC_4351 peptidase S49
YP_783318.1	PFAM: methyltransferase small; Methyltransferase type 12; KEGG: rpc:RPC_4352 methyltransferase small
YP_783319.1	KEGG: rpd:RPD_1215 hypothetical protein
YP_783320.1	PFAM: Polyprenyl synthetase; KEGG: rpa:RPA1040 octaprenyl-diphosphate synthase
YP_783323.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_783324.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpc:RPC_4357 tetratricopeptide TPR_2
YP_783325.1	PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: rpc:RPC_4358 electron-transferring-flavoprotein dehydrogenase
YP_783326.1	TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rpc:RPC_4359 phage SPO1 DNA polymerase-related protein
YP_783327.1	KEGG: rpc:RPC_4360 hypothetical protein
YP_783328.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_783329.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpc:RPC_4362 radical SAM
YP_783330.1	KEGG: rpc:RPC_4363 glycosyl transferase, family 2
YP_783331.1	PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: bja:bll2512 putative acetyltransferase
YP_783333.1	TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: rpd:RPD_1202 molybdenum cofactor biosynthesis protein
YP_783334.1	PFAM: protein of unknown function, zinc metallopeptidase putative; KEGG: rpc:RPC_4365 protein of unknown function, zinc metallopeptidase putative
YP_783335.1	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rpc:RPC_4366 DNA methylase N-4/N-6
YP_783336.1	KEGG: rpc:RPC_4367 hypothetical protein
YP_783337.1	KEGG: rpc:RPC_4368 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_783338.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_4370 plasmid maintenance system antidote protein, XRE family
YP_783339.1	PFAM: protein of unknown function DUF1159; KEGG: rpc:RPC_4371 protein of unknown function DUF1159
YP_783340.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_4372 twin-arginine translocation pathway signal
YP_783341.1	KEGG: rpc:RPC_4379 hypothetical protein
YP_783342.1	KEGG: rpc:RPC_4378 hypothetical protein
YP_783344.1	PFAM: peptidase M48, Ste24p; KEGG: rpb:RPB_4314 peptidase M48, Ste24p
YP_783345.1	PFAM: LemA family protein; KEGG: rpb:RPB_4313 LemA
YP_783346.1	KEGG: rpd:RPD_1193 methyltransferase type 11
YP_783347.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: rpc:RPC_4374 chromosome segregation protein SMC
YP_783348.1	KEGG: rpa:RPA3586 hypothetical protein
YP_783349.1	KEGG: nmu:Nmul_A0122 hypothetical protein
YP_783350.1	trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II
YP_783351.1	KEGG: rpc:RPC_4391 hypothetical protein
YP_783352.1	PFAM: endodeoxyribonuclease RusA; KEGG: rpc:RPC_4392 hypothetical protein
YP_783353.1	PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpd:RPD_4215 methyltransferase type 12
YP_783354.1	PFAM: ABC-1 domain protein; KEGG: rpd:RPD_4216 ABC-1
YP_783355.1	KEGG: rpc:RPC_4390 hypothetical protein
YP_783356.1	PFAM: PhnA protein; KEGG: rpc:RPC_4393 PhnA protein
YP_783357.1	KEGG: rpc:RPC_4395 hypothetical protein
YP_783358.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpc:RPC_4396 AMP-dependent synthetase and ligase
YP_783359.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpc:RPC_4397 tetratricopeptide TPR_2
YP_783360.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_4328 short-chain dehydrogenase/reductase SDR
YP_783361.1	KEGG: nha:Nham_2708 hypothetical protein
YP_783362.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpa:RPA4507 elongator protein 3/MiaB/NifB
YP_783363.1	KEGG: rpc:RPC_4398 hypothetical protein
YP_783364.1	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpc:RPC_4399 TRAP transporter, 4TM/12TM fusion protein
YP_783365.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rpc:RPC_4400 TRAP transporter solute receptor, TAXI family
YP_783366.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Uncharacterized protein UPF0065; KEGG: rpb:RPB_4334 twin-arginine translocation pathway signal
YP_783367.1	KEGG: gsu:GSU2675 hypothetical protein
YP_783368.1	PFAM: EAL domain protein; KEGG: rpd:RPD_4230 putative cylclic diguanylate phosphodiesterase
YP_783369.1	KEGG: rpc:RPC_4403 hypothetical protein
YP_783370.1	KEGG: rpc:RPC_4404 hypothetical protein
YP_783371.1	KEGG: zmo:ZMO1548 squalene--hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase
YP_783373.1	KEGG: rpb:RPB_4338 hypothetical protein
YP_783374.1	PFAM: NUDIX hydrolase; KEGG: rpb:RPB_4339 NUDIX hydrolase
YP_783375.1	PFAM: thioesterase superfamily protein; KEGG: rpb:RPB_4340 thioesterase superfamily
YP_783376.1	PFAM: helix-turn-helix domain protein; KEGG: rru:Rru_A2442 transcriptional regulator, XRE family
YP_783377.1	PFAM: HipA domain protein; KEGG: sat:SYN_02732 protein HipA
YP_783378.1	PFAM: helix-turn-helix domain protein; KEGG: ftl:FTL_1126 transcriptional regulator
YP_783380.1	PFAM: protein of unknown function DUF329; KEGG: rpc:RPC_4413 protein of unknown function DUF329
YP_783381.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_783382.1	KEGG: rpb:RPB_4347 hypothetical protein
YP_783383.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpc:RPC_4415 protein tyrosine phosphatase
YP_783384.1	PFAM: Uncharacterised conserved protein UCP032146; KEGG: rpb:RPB_4349 uncharacterised conserved protein UCP032146
YP_783385.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_783386.1	PFAM: transposase, IS4 family protein; KEGG: rpc:RPC_2070 transposase, IS4
YP_783387.1	KEGG: rpd:RPD_4280 hypothetical protein
YP_783388.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_783389.1	KEGG: rpc:RPC_4419 hypothetical protein
YP_783390.1	PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_4420 alpha/beta hydrolase fold
YP_783391.1	KEGG: rpb:RPB_4355 hypothetical protein
YP_783392.1	PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6868 alpha/beta hydrolase
YP_783393.1	PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bja:blr1249 hypothetical protein
YP_783394.1	PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: rpc:RPC_4421 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_783395.1	KEGG: rpc:RPC_4422 hypothetical protein
YP_783396.1	PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: rpd:RPD_2373 regulatory protein, LuxR
YP_783397.1	PFAM: regulatory protein, LuxR; KEGG: rpd:RPD_2372 regulatory protein, LuxR
YP_783398.1	KEGG: rpd:RPD_2371 hypothetical protein
YP_783399.1	structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum
YP_783400.1	TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: dvu:DVU2218 GTP-binding protein, putative
YP_783401.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: rpa:RPA0707 putative periplasmic divalent cation resistance protein CutA
YP_783402.1	TIGRFAM: putative regulatory protein, FmdB family; KEGG: rpd:RPD_0644 hypothetical protein
YP_783403.1	PFAM: ADP-ribosylation/Crystallin J1; SMART: protein tyrosine phosphatase, catalytic region; KEGG: rpc:RPC_0422 ADP-ribosylation/crystallin J1
YP_783404.1	KEGG: rpc:RPC_0423 hypothetical protein
YP_783405.1	KEGG: rpc:RPC_1274 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase
YP_783406.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_1275 putative methyltransferase
YP_783407.1	PFAM: small multidrug resistance protein; KEGG: rpc:RPC_1276 small multidrug resistance protein
YP_783408.1	PFAM: Mg2+ transporter protein, CorA family protein; KEGG: rpc:RPC_1278 Mg2+ transporter protein, CorA-like
YP_783409.1	PFAM: NUDIX hydrolase; KEGG: rpc:RPC_4436 NUDIX hydrolase
YP_783410.1	KEGG: rpc:RPC_4438 hypothetical protein
YP_783411.1	KEGG: rpc:RPC_4441 hypothetical protein
YP_783412.1	TIGRFAM: Molybdenum-pterin binding; PFAM: TOBE domain protein; KEGG: rpc:RPC_4442 molybdenum-pterin binding domain
YP_783413.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpc:RPC_4443 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_783414.1	TIGRFAM: alkylhydroperoxidase, AhpD family; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rpc:RPC_4444 alkylhydroperoxidase, AhpD family
YP_783415.1	KEGG: rpc:RPC_4445 ferredoxin like protein, FixX
YP_783416.1	PFAM: monooxygenase, FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; KEGG: rpc:RPC_4446 electron-transferring-flavoprotein dehydrogenase
YP_783417.1	PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: rpc:RPC_4447 electron transfer flavoprotein beta-subunit
YP_783418.1	PFAM: electron transfer flavoprotein beta-subunit; KEGG: rpc:RPC_4448 electron transfer flavoprotein beta-subunit
YP_783419.1	associates with NifD and may protect the nitrogenase Fe-Mo protein from oxidative damage
YP_783420.1	TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: rpc:RPC_4450 pyruvate carboxyltransferase
YP_783421.1	PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG: rpc:RPC_4451 aminotransferase, class V
YP_783422.1	PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rpc:RPC_4452 nitrogen-fixing NifU-like
YP_783423.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpa:RPA4610 protein of unknown function, HesB/YadR/YfhF
YP_783424.1	PFAM: NifQ family protein; KEGG: rpc:RPC_4454 NifQ
YP_783425.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpa:RPA4612 ferredoxin 2[4Fe-4S] III, FdxB
YP_783426.1	PFAM: protein of unknown function DUF683; KEGG: rpc:RPC_4456 protein of unknown function DUF683
YP_783427.1	PFAM: protein of unknown function DUF269; KEGG: rpc:RPC_4457 protein of unknown function DUF269
YP_783428.1	TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: rpc:RPC_4458 dinitrogenase iron-molybdenum cofactor biosynthesis
YP_783429.1	functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe
YP_783430.1	functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe
YP_783431.1	KEGG: rpc:RPC_4461 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase, component 1
YP_783432.1	KEGG: rpc:RPC_4462 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1
YP_783433.1	nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis
YP_783434.1	KEGG: rpc:RPC_4464 hypothetical protein
YP_783435.1	PFAM: NifT/FixU family protein; KEGG: rpc:RPC_4466 NifT/FixU
YP_783436.1	PFAM: NifZ family protein; KEGG: rpc:RPC_4467 NifZ
YP_783437.1	PFAM: NifZ family protein; KEGG: rpd:RPD_1068 NifZ
YP_783438.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rpc:RPC_4469 tetratricopeptide TPR_2
YP_783439.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpc:RPC_4470 HesB/YadR/YfhF
YP_783440.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpc:RPC_4471 4Fe-4S ferredoxin, iron-sulfur binding
YP_783441.1	TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; Radical SAM domain protein; KEGG: rpc:RPC_4472 nitrogenase cofactor biosynthesis protein NifB
YP_783442.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpc:RPC_4473 4Fe-4S ferredoxin, iron-sulfur binding
YP_783443.1	KEGG: rpc:RPC_4475 transcriptional regulator, NifA, fis family; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_783444.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_4476 short-chain dehydrogenase/reductase SDR
YP_783445.1	KEGG: rpc:RPC_4477 hypothetical protein
YP_783446.1	PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll3856 probable medium-chain-fatty-acid--CoA ligase
YP_783447.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_1239 antenna complex, alpha/beta subunit
YP_783448.1	PFAM: antenna complex, alpha/beta subunit; KEGG: rpa:RPA2654 light harvesting protein B-800-850, beta chain A (antenna pigment protein, beta chain A) (LH II-A beta)
YP_783449.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: rpa:RPA1965 putative adenylate/guanylate cyclase
YP_783450.1	KEGG: rpc:RPC_4526 hypothetical protein
YP_783451.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rpc:RPC_4525 major facilitator superfamily MFS_1
YP_783452.1	KEGG: rpc:RPC_4524 HAD-superfamily hydrolase subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase
YP_783453.1	KEGG: rpc:RPC_4523 alpha,alpha-trehalose-phosphate synthase; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase, family 20
YP_783454.1	TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: bur:Bcep18194_B1068 haemagglutinin-like
YP_783455.1	PFAM: FecR protein; KEGG: rpb:RPB_2206 putative FecR
YP_783456.1	PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_2205 sigma-24 (FecI-like)
YP_783457.1	PFAM: Secretin/TonB, short N-terminal domain; KEGG: rpb:RPB_2211 hypothetical protein
YP_783458.1	KEGG: cch:Cag_0831 regulatory proteins, AsnC family
YP_783459.1	PFAM: cytochrome B561; KEGG: rpb:RPB_2376 cytochrome b561
YP_783460.1	PFAM: Calcium-binding EF-hand-containing protein; KEGG: rpb:RPB_2375 calcium-binding EF-hand protein
YP_783461.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpb:RPB_2374 two component transcriptional regulator, winged helix family
YP_783462.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpb:RPB_2373 periplasmic sensor signal transduction histidine kinase
YP_783463.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: mlo:mll2462 hypothetical protein
YP_783465.1	KEGG: rpb:RPB_1336 hypothetical protein
YP_783467.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4527 methyl-accepting chemotaxis sensory transducer
YP_783468.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rpc:RPC_4528 (2Fe-2S)-binding
YP_783469.1	PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpc:RPC_4529 carbon-monoxide dehydrogenase
YP_783470.1	PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rpc:RPC_4530 carbon-monoxide dehydrogenase
YP_783471.1	PFAM: chemotaxis sensory transducer; KEGG: bja:bll4376 hypothetical protein
YP_783472.1	KEGG: rpc:RPC_4537 hypothetical protein
YP_783473.1	PFAM: PepSY-associated TM helix domain protein; KEGG: nwi:Nwi_2813 PepSY-associated TM helix
YP_783474.1	KEGG: nha:Nham_3634 hypothetical protein
YP_783475.1	KEGG: nha:Nham_3635 hypothetical protein
YP_783476.1	PFAM: ApbE family lipoprotein; KEGG: nha:Nham_3636 ApbE-like lipoprotein
YP_783477.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: nha:Nham_3637 2OG-Fe(II) oxygenase
YP_783478.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: nha:Nham_3638 TonB-dependent siderophore receptor
YP_783479.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpc:RPC_4540 MotA/TolQ/ExbB proton channel
YP_783480.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpc:RPC_4541 biopolymer transport protein ExbD/TolR
YP_783481.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: rpc:RPC_4542 TonB-like
YP_783482.1	PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: nha:Nham_3642 SecA DEAD-like
YP_783483.1	KEGG: rpc:RPC_4544 hypothetical protein
YP_783484.1	PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_A2257 small-conductance mechanosensitive ion channel
YP_783485.1	KEGG: ana:alr0276 hypothetical protein
YP_783486.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpd:RPD_3984 AMP-dependent synthetase and ligase
YP_783487.1	KEGG: rpc:RPC_0963 hypothetical protein
YP_783488.1	PFAM: transposase, IS4 family protein; KEGG: sth:STH2086 transposase
YP_783489.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_783490.1	PFAM: Phosphoglycerate mutase; KEGG: rpd:RPD_1313 phosphoglycerate mutase
YP_783491.1	Catalyzes a key regulatory step in fatty acid biosynthesis
YP_783492.1	PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rpc:RPC_1138 chaperone DnaJ-like
YP_783493.1	KEGG: rpc:RPC_1137 hypothetical protein
YP_783494.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate
YP_783495.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rpa:RPA1195 short-chain dehydrogenase
YP_783496.1	TIGRFAM: putative regulatory protein, FmdB family; KEGG: rpa:RPA1256 putative formamidase regulatory protein FmdB
YP_783497.1	PFAM: Acetamidase/Formamidase; KEGG: rpd:RPD_3859 formamidase
YP_783498.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1256 ABC transporter related
YP_783499.1	PFAM: ABC transporter related; KEGG: rpd:RPD_3861 ABC transporter related
YP_783500.1	PFAM: inner-membrane translocator; KEGG: rpd:RPD_3862 inner-membrane translocator
YP_783501.1	PFAM: inner-membrane translocator; KEGG: rpb:RPB_1253 inner-membrane translocator
YP_783502.1	KEGG: rpd:RPD_3864 amide-UreA binding protein
YP_783503.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpb:RPB_1251 multi-sensor hybrid histidine kinase
YP_783504.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rpd:RPD_3866 response regulator receiver
YP_783505.1	KEGG: rpc:RPC_4598 hypothetical protein
YP_783506.1	PFAM: protein of unknown function DUF1469; KEGG: rpc:RPC_4599 protein of unknown function DUF1469
YP_783507.1	KEGG: rpc:RPC_4600 late embryogenesis abundant protein
YP_783508.1	PFAM: Late embryogenesis abundant protein; KEGG: rpc:RPC_4601 hypothetical protein
YP_783509.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_1244 AMP-dependent synthetase and ligase
YP_783511.1	KEGG: nha:Nham_2537 transcriptional regulator-related protein
YP_783512.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_783513.1	KEGG: rpc:RPC_4620 hypothetical protein
YP_783514.1	KEGG: bja:bsl7504 hypothetical protein
YP_783515.1	KEGG: rpb:RPB_1861 hypothetical protein
YP_783516.1	KEGG: rpb:RPB_1860 alpha/beta hydrolase
YP_783517.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_783518.1	KEGG: rpc:RPC_4623 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase
YP_783519.1	PFAM: glycoside hydrolase, family 1; KEGG: bja:blr4657 beta-glucosidase
YP_783520.1	KEGG: rpc:RPC_4624 hypothetical protein
YP_783521.1	KEGG: rpc:RPC_4626 hypothetical protein
YP_783522.1	PFAM: beta-lactamase; KEGG: rpd:RPD_0869 6-aminohexanoate-dimer hydrolase
YP_783523.1	PFAM: protein of unknown function DUF307; KEGG: rpc:RPC_4633 protein of unknown function DUF307
YP_783524.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_783525.1	One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_783526.1	one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex
YP_783527.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; KEGG: rpb:RPB_4648 osmosensitive K+ channel signal transduction histidine kinase
YP_783528.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpb:RPB_4649 two component transcriptional regulator, winged helix family
YP_783529.1	PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: bja:bll6060 putative catabolite gene activator
YP_783530.1	PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bja:bll5043 hypothetical protein
YP_783531.1	KEGG: bja:bll5042 hypothetical protein
YP_783532.1	KEGG: bja:bll5041 hypothetical protein
YP_783533.1	KEGG: bja:bll5040 putative iron-dependent peroxidase
YP_783534.1	PFAM: Hly-III family protein; KEGG: rpa:RPA1585 putative hemmolysin III, HlyIII family
YP_783535.1	catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide
YP_783536.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_2056 ABC transporter related
YP_783537.1	TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_2055 nitrate transport permease
YP_783538.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_2054 twin-arginine translocation pathway signal
YP_783539.1	KEGG: rpb:RPB_2053 transcriptional regulator, fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase
YP_783540.1	KEGG: sil:SPOA0203 hypothetical protein
YP_783542.1	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sil:SPOA0205 serine protease, subtilase family
YP_783543.1	PFAM: peptidase S1 and S6, chymotrypsin/Hap; phospholipase D/Transphosphatidylase; KEGG: rpc:RPC_3413 hypothetical protein
YP_783544.1	PFAM: major facilitator superfamily MFS_1; KEGG: rpa:RPA0737 putative oxalate/formate major facilitator superfamily (MFS) antiporter
YP_783545.1	KEGG: rpd:RPD_0621 putative NAD-dependent formate dehydrogenase delta subunit
YP_783546.1	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth
YP_783547.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rpc:RPC_4645 formate dehydrogenase, alpha subunit
YP_783548.1	PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rpc:RPC_4646 NADH dehydrogenase (quinone)
YP_783549.1	catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor
YP_783550.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_4648 transcriptional regulator, LysR family
YP_783551.1	PFAM: acriflavin resistance protein; KEGG: rpb:RPB_4300 acriflavin resistance protein
YP_783552.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bja:bll5772 hypothetical protein
YP_783553.1	KEGG: rpd:RPD_4202 hypothetical protein
YP_783554.1	PFAM: CHAD domain containing protein; KEGG: rpc:RPC_4651 CHAD
YP_783555.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4653 periplasmic sensor signal transduction histidine kinase
YP_783556.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4654 two component transcriptional regulator, winged helix family
YP_783557.1	PFAM: cytochrome B561; KEGG: rpc:RPC_4656 cytochrome b561
YP_783558.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rpc:RPC_4657 heavy metal efflux pump CzcA
YP_783559.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rpc:RPC_4658 secretion protein HlyD
YP_783560.1	KEGG: rpc:RPC_4659 hypothetical protein
YP_783561.1	KEGG: rpb:RPB_1100 hypothetical protein
YP_783562.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4661 methyl-accepting chemotaxis sensory transducer
YP_783563.1	KEGG: rpc:RPC_4662 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_783564.1	PFAM: ABC-2 type transporter; KEGG: rpc:RPC_4663 ABC-2
YP_783565.1	PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: rpc:RPC_4664 ABC transporter related
YP_783566.1	PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_4665 secretion protein HlyD
YP_783567.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_4666 transcriptional regulator, TetR family
YP_783568.1	KEGG: rpc:RPC_4667 methyl-accepting chemotaxis sensory transducer
YP_783569.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: rpc:RPC_4668 response regulator receiver (CheY-like) modulated CheB methylesterase
YP_783570.1	PFAM: MCP methyltransferase, CheR-type; KEGG: rpc:RPC_4669 MCP methyltransferase, CheR-type
YP_783571.1	PFAM: CheW domain protein; KEGG: rpc:RPC_4670 CheW protein
YP_783572.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4672 methyl-accepting chemotaxis sensory transducer
YP_783573.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4674 methyl-accepting chemotaxis sensory transducer
YP_783574.1	PFAM: CheW domain protein; KEGG: rpc:RPC_4675 CheW protein
YP_783575.1	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rpc:RPC_4676 CheA signal transduction histidine kinases
YP_783576.1	PFAM: response regulator receiver; KEGG: rpc:RPC_4677 response regulator receiver domain protein (CheY-like)
YP_783577.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rpc:RPC_4678 anti-sigma-factor antagonist (STAS) domain protein
YP_783578.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpa:RPA1955 glutathione dependent formaldehyde dehydrogenase
YP_783579.1	catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione
YP_783580.1	PFAM: putative esterase; KEGG: rpc:RPC_0099 carboxylesterase
YP_783581.1	KEGG: bja:bll6187 hypothetical protein
YP_783582.1	KEGG: bja:blr6188 hypothetical protein
YP_783583.1	TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bja:blr6189 hypothetical protein
YP_783584.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0248 ABC transporter related
YP_783585.1	PFAM: ABC-2 type transporter; KEGG: bja:blr6191 ABC transporter permease protein
YP_783586.1	KEGG: bja:blr6192 hypothetical protein
YP_783587.1	KEGG: rpc:RPC_4729 hypothetical protein
YP_783588.1	PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_4731 ABC transporter-like
YP_783589.1	TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4732 hypothetical protein
YP_783590.1	KEGG: rpc:RPC_4733 hypothetical protein
YP_783591.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: rpc:RPC_4734 protein of unknown function DUF224, cysteine-rich region
YP_783592.1	PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_4735 FAD linked oxidase-like
YP_783593.1	PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_4736 FAD linked oxidase-like
YP_783594.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_4737 transcriptional regulator, TetR family
YP_783595.1	PFAM: branched-chain amino acid transport; KEGG: rpb:RPB_1825 branched-chain amino acid transport
YP_783596.1	PFAM: AzlC family protein; KEGG: rpb:RPB_1824 AzlC-like
YP_783598.1	KEGG: rpb:RPB_1818 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_783599.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: ExsB family protein; PP-loop domain protein; KEGG: rpc:RPC_4744 tRNA(Ile)-lysidine synthetase-like
YP_783600.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rpc:RPC_4747 hypothetical protein
YP_783601.1	PFAM: OmpA/MotB domain protein; KEGG: rpc:RPC_4748 OmpA/MotB
YP_783602.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: rpc:RPC_0740 transcriptional regulator, AraC family
YP_783603.1	PFAM: O-methyltransferase, family 3; KEGG: rpc:RPC_0739 O-methyltransferase, family 3
YP_783604.1	KEGG: rpc:RPC_4749 hypothetical protein
YP_783605.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpc:RPC_4750 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains)
YP_783606.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_783607.1	KEGG: rpc:RPC_4752 putative TolA
YP_783608.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpc:RPC_4753 biopolymer transport protein ExbD/TolR
YP_783609.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpc:RPC_4754 MotA/TolQ/ExbB proton channel
YP_783610.1	KEGG: bja:bll2420 hypothetical protein
YP_783611.1	KEGG: rpc:RPC_4757 hypothetical protein
YP_783612.1	PFAM: regulatory protein, TetR; KEGG: rpc:RPC_4758 transcriptional regulator, TetR family
YP_783613.1	PFAM: DGPFAETKE family protein; KEGG: rpb:RPB_1804 DGPF protein
YP_783614.1	KEGG: bja:bll7164 hypothetical protein
YP_783615.1	PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpd:RPD_4158 short-chain dehydrogenase/reductase SDR
YP_783616.1	TIGRFAM: prevent-host-death family protein; KEGG: rpb:RPB_0354 prevent-host-death protein
YP_783618.1	PFAM: inositol monophosphatase; KEGG: rpc:RPC_4776 inositol-1(or 4)-monophosphatase
YP_783619.1	KEGG: rpc:RPC_4775 Sel1-like
YP_783620.1	PFAM: thiamine monophosphate synthase; KEGG: rpc:RPC_4774 thiamine monophosphate synthase
YP_783621.1	PFAM: fructose-bisphosphate aldolase, class-I; KEGG: rpb:RPB_4471 fructose-bisphosphate aldolase
YP_783622.1	PFAM: PemK family protein; KEGG: rpa:RPA0941 hypothetical protein
YP_783623.1	KEGG: rpa:RPA0942 hypothetical protein
YP_783624.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_783625.1	KEGG: rpc:RPC_4769 hypothetical protein
YP_783627.1	KEGG: rpc:RPC_4767 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_783628.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
YP_783629.1	KEGG: rpc:RPC_4765 hypothetical protein
YP_783630.1	PFAM: protein of unknown function DUF710; KEGG: rpc:RPC_4764 protein of unknown function DUF710
YP_783631.1	KEGG: nha:Nham_2660 hypothetical protein
YP_783632.1	KEGG: bja:bll6496 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_783633.1	PFAM: DGPFAETKE family protein; KEGG: rpd:RPD_4161 hypothetical protein
YP_783634.1	PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpd:RPD_4160 sigma-70 region 2
YP_783635.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: rpc:RPC_4762 glyoxalase/bleomycin resistance protein/dioxygenase
YP_783636.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_4760 drug resistance transporter Bcr/CflA subfamily
YP_783637.1	KEGG: rpc:RPC_4777 hypothetical protein
YP_783638.1	PFAM: peptidase U32; KEGG: rpc:RPC_4778 peptidase U32
YP_783639.1	PFAM: peptidase U32; KEGG: rpc:RPC_4779 peptidase U32
YP_783640.1	KEGG: rpc:RPC_4780 hypothetical protein
YP_783641.1	TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: rpc:RPC_4781 carboxylyase-related protein
YP_783642.1	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: rpc:RPC_4782 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
YP_783643.1	KEGG: rpd:RPD_4330 hypothetical protein
YP_783644.1	KEGG: rpd:RPD_4331 hypothetical protein
YP_783645.1	SMART: helix-turn-helix domain protein; KEGG: rpd:RPD_4332 helix-turn-helix type 3
YP_783646.1	PFAM: peptidase U62, modulator of DNA gyrase; KEGG: rpc:RPC_4785 peptidase U62, modulator of DNA gyrase
YP_783647.1	PFAM: protein of unknown function DUF433; KEGG: rpa:RPA0826 DUF433
YP_783648.1	KEGG: rpb:RPB_1020 hypothetical protein
YP_783649.1	PFAM: Invasion associated locus B family protein; KEGG: rpd:RPD_0813 invasion associated locus B
YP_783650.1	PFAM: cytochrome c oxidase, subunit II; cytochrome C oxidase subunit II, transmembrane region; KEGG: rpc:RPC_4787 cytochrome-c oxidase
YP_783651.1	PFAM: cytochrome c oxidase, subunit I; KEGG: rpc:RPC_4788 cytochrome-c oxidase
YP_783652.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_783653.1	KEGG: rpc:RPC_4790 CoxF protein
YP_783654.1	involved in the insertion of copper into subunit I of cytochrome C oxidase
YP_783655.1	PFAM: cytochrome c oxidase, subunit III; KEGG: rpc:RPC_4792 cytochrome c oxidase, subunit III
YP_783656.1	PFAM: protein of unknown function DUF983; KEGG: rpc:RPC_4793 protein of unknown function DUF983
YP_783657.1	PFAM: Surfeit locus 1 family protein; KEGG: rpc:RPC_4794 surfeit locus 1
YP_783658.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_783659.1	PFAM: peptidase M16 domain protein; KEGG: rpc:RPC_4796 peptidase M16-like
YP_783660.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_4797 GCN5-related N-acetyltransferase
YP_783661.1	KEGG: rpc:RPC_4798 hypothetical protein
YP_783662.1	TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_4799 4-hydroxybenzoyl-CoA thioesterase
YP_783663.1	KEGG: bja:blr1538 hypothetical protein
YP_783664.1	PFAM: plasmid stabilization system; KEGG: rpc:RPC_4802 addiction module toxin, RelE/StbE
YP_783665.1	KEGG: rpc:RPC_4801 hypothetical protein
YP_783666.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_783667.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: rpa:RPA1101 cytidine deaminase
YP_783668.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_783669.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_783670.1	PFAM: protein of unknown function DUF28; KEGG: rpc:RPC_4807 protein of unknown function DUF28
YP_783671.1	PFAM: chemotaxis sensory transducer; KEGG: rpc:RPC_4808 methyl-accepting chemotaxis sensory transducer
YP_783672.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpc:RPC_4810 radical SAM
YP_783673.1	TIGRFAM: conserved hypothetical protein; PFAM: metallophosphoesterase; KEGG: rpc:RPC_4811 hypothetical protein
YP_783674.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: rpc:RPC_4812 5-formyltetrahydrofolate cyclo-ligase
YP_783675.1	PFAM: H+-transporting two-sector ATPase, B/B' subunit; KEGG: rpc:RPC_4813 H+-transporting two-sector ATPase, B/B' subunit
YP_783676.1	PFAM: H+-transporting two-sector ATPase, B/B' subunit; KEGG: rpc:RPC_4814 H+-transporting two-sector ATPase, B/B' subunit
YP_783677.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_783678.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_783679.1	KEGG: nha:Nham_0270 FoF1 ATP synthase, subunit I
YP_783680.1	PFAM: DSBA oxidoreductase; KEGG: rpc:RPC_4818 DsbA oxidoreductase
YP_783681.1	KEGG: rpc:RPC_4819 hypothetical protein
YP_783682.1	PFAM: protein of unknown function UPF0047; KEGG: rpc:RPC_4820 protein of unknown function UPF0047
YP_783683.1	PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rpd:RPD_0835 general substrate transporter
YP_783684.1	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: rpc:RPC_4822 two component transcriptional regulator, LuxR family
YP_783685.1	PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4823 periplasmic sensor hybrid histidine kinase
YP_783686.1	catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine
YP_783687.1	PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_4825 beta-lactamase-like
YP_783688.1	PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: rpc:RPC_4826 OmpA-like transmembrane region
YP_783689.1	KEGG: nha:Nham_3429 hypothetical protein
YP_783690.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4828 ABC transporter related
YP_783691.1	PFAM: ABC-3 protein; KEGG: rpc:RPC_4829 ABC-3
YP_783692.1	PFAM: periplasmic solute binding protein; KEGG: rpb:RPB_4557 periplasmic solute binding protein
YP_783693.1	PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rpb:RPB_4556 cobalamin synthesis protein, P47K
YP_783694.1	SMART: WD-40 repeat protein; KEGG: rpc:RPC_4832 WD-40 repeat
YP_783695.1	KEGG: rpc:RPC_4833 hypothetical protein
YP_783698.1	PFAM: homospermidine synthase; KEGG: rpc:RPC_4834 homospermidine synthase
YP_783699.1	PFAM: Endoribonuclease L-PSP; KEGG: rpa:RPA0867 endoribonuclease L-PSP
YP_783700.1	PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA0869 GCN5-related N-acetyltransferase
YP_783701.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rpc:RPC_4837 ornithine decarboxylase
YP_783702.1	KEGG: rpb:RPB_4546 hypothetical protein
YP_783703.1	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: rpc:RPC_4839 peptidyl-dipeptidase DCP
YP_783704.1	PFAM: protein of unknown function DUF1007; KEGG: rpb:RPB_4544 protein of unknown function DUF1007
YP_783705.1	PFAM: high-affinity nickel-transporter; KEGG: rpc:RPC_4841 high-affinity nickel-transporter
YP_783706.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
YP_783707.1	PFAM: band 7 protein; KEGG: rpd:RPD_0862 band 7 protein
YP_783708.1	PFAM: protein of unknown function DUF107; KEGG: rpc:RPC_4844 protein of unknown function DUF107
YP_783709.1	KEGG: rpc:RPC_4845 hypothetical protein
YP_783710.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_783711.1	PFAM: conserved hypothetical protein 103; KEGG: rpc:RPC_4847 conserved hypothetical protein 103
YP_783712.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA
YP_783713.1	PFAM: histidine triad (HIT) protein; KEGG: rpc:RPC_4849 histidine triad (HIT) protein
YP_783714.1	PFAM: NUDIX hydrolase; KEGG: rpc:RPC_4850 NUDIX hydrolase
YP_783715.1	PFAM: PfkB domain protein; KEGG: rpc:RPC_4851 PfkB
YP_783716.1	TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4853 hypothetical protein
YP_783717.1	KEGG: rpb:RPB_0505 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent, C-terminal domain protein; SMART: DEAD/DEAH box helicase domain protein
YP_783718.1	PFAM: acyltransferase 3; KEGG: rpc:RPC_4855 acyltransferase 3
YP_783719.1	KEGG: rpb:RPB_0849 hypothetical protein
YP_783720.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
YP_783721.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_783722.1	KEGG: rpc:RPC_4859 hypothetical protein
YP_783723.1	KEGG: rpc:RPC_4860 hypothetical protein
YP_783725.1	KEGG: rpc:RPC_4861 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35
YP_783726.1	KEGG: rpd:RPD_0951 hypothetical protein
YP_783727.1	PFAM: ChaC family protein; KEGG: rpd:RPD_0947 ChaC-like protein
YP_783728.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: rpc:RPC_4864 phospholipid/glycerol acyltransferase
YP_783729.1	PFAM: protein of unknown function DUF218; KEGG: rpc:RPC_4865 protein of unknown function DUF218
YP_783730.1	PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_4866 protein of unknown function DUF214
YP_783731.1	KEGG: rpa:RPA4736 putative cell division ATP-binding protein FtsE, ABC type transporter; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_783732.1	TIGRFAM: MJ0042 family finger-like protein; KEGG: rpc:RPC_4868 zinc finger/thioredoxin putative
YP_783733.1	PFAM: response regulator receiver; KEGG: rpd:RPD_0941 response regulator receiver
YP_783734.1	KEGG: rpc:RPC_4870 hypothetical protein
YP_783735.1	KEGG: rpc:RPC_4870 hypothetical protein
YP_783736.1	PFAM: Pyridoxal-dependent decarboxylase; KEGG: rpc:RPC_4871 pyridoxal-dependent decarboxylase
YP_783737.1	TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4872 hypothetical protein
YP_783738.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: rpd:RPD_0939 carboxymuconolactone decarboxylase
YP_783739.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rpb:RPB_0829 diaminopimelate decarboxylase
YP_783740.1	KEGG: rpc:RPC_4874 hypothetical protein
YP_783741.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_783742.1	PFAM: Redoxin domain protein; KEGG: rpc:RPC_4876 thioredoxin-like
YP_783743.1	PFAM: protein of unknown function DUF1428; KEGG: rpd:RPD_0934 protein of unknown function DUF1428
YP_783744.1	KEGG: rpc:RPC_4877 hypothetical protein
YP_783746.1	converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA
YP_783747.1	PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: rpd:RPD_0931 electron transfer flavoprotein, alpha subunit
YP_783748.1	PFAM: electron transfer flavoprotein beta-subunit; KEGG: rpa:RPA4750 electron transfer flavoprotein beta chain, (ETFSS)
YP_783749.1	TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rpc:RPC_4881 ATP
YP_783750.1	KEGG: rpd:RPD_0928 hypoxia induced protein conserved region
YP_783751.1	PFAM: ribonuclease BN; KEGG: rpc:RPC_4883 ribonuclease BN
YP_783752.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4884 histidine kinase
YP_783753.1	this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu
YP_783754.1	PFAM: HhH-GPD family protein; KEGG: rpa:RPA4755 possible DNA-3-methyladenine glycosidase II
YP_783755.1	KEGG: nwi:Nwi_0071 hypothetical protein
YP_783757.1	KEGG: rpb:RPB_0080 hypothetical protein
YP_783758.1	KEGG: rpc:RPC_0722 hypothetical protein
YP_783759.1	KEGG: rpc:RPC_0723 hypothetical protein
YP_783760.1	KEGG: rpa:RPA4640 hypothetical protein
YP_783761.1	PFAM: response regulator receiver; KEGG: rpa:RPA4322 response regulator receiver (CheY-like protein)
YP_783762.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: rpc:RPC_4889 PAS/PAC sensor hybrid histidine kinase
YP_783763.1	PFAM: PRC-barrel domain protein; KEGG: rpc:RPC_4890 PRC-barrel
YP_783764.1	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rpa:RPA4759 glycosyl hydrolase, family 13
YP_783765.1	KEGG: rpc:RPC_4892 hypothetical protein
YP_783766.1	KEGG: rpd:RPD_2376 cytochrome c family protein
YP_783767.1	PFAM: DNA polymerase, beta domain protein region; KEGG: rpd:RPD_1926 DNA polymerase, beta-like region
YP_783768.1	TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: rpc:RPC_4898 methylated-DNA--protein-cysteine methyltransferase
YP_783769.1	PFAM: multi antimicrobial extrusion protein MatE; KEGG: rpa:RPA4763 possible cation efflux pump
YP_783770.1	KEGG: rpb:RPB_0795 L-sorbosone dehydrogenase
YP_783771.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: metallophosphoesterase; KEGG: rpd:RPD_0905 twin-arginine translocation pathway signal
YP_783772.1	PFAM: protein of unknown function DUF820; KEGG: rpc:RPC_0006 protein of unknown function DUF820
YP_783773.1	PFAM: protein of unknown function DUF820; KEGG: rpc:RPC_4289 hypothetical protein
YP_783774.1	PFAM: DNA polymerase, beta domain protein region; KEGG: rpc:RPC_4901 DNA polymerase, beta-like region
YP_783775.1	Catalyzes the deamination of dCTP to form dUTP
YP_783776.1	catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis
YP_783777.1	PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rpc:RPC_4910 lipolytic enzyme, G-D-S-L
YP_783778.1	KEGG: rpc:RPC_4911 hypothetical protein
YP_783779.1	KEGG: rpc:RPC_4912 putative OpgC protein
YP_783780.1	protein associated with Co2+ and Mg2+ efflux
YP_783781.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
YP_783782.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_783783.1	DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine
YP_783784.1	PFAM: GcrA cell cycle regulator; KEGG: rpd:RPD_0894 GcrA cell cycle regulator
YP_783785.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4918 two component transcriptional regulator, winged helix family
YP_783786.1	TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rpc:RPC_4919 phosphate uptake regulator, PhoU
YP_783787.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_783788.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0778 phosphate transport system permease protein 2
YP_783789.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0777 phosphate ABC transporter, permease protein PstC
YP_783790.1	TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_4923 periplasmic phosphate binding protein
YP_783791.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4924 histidine kinase
YP_783792.1	KEGG: rpc:RPC_4925 hypothetical protein
YP_783793.1	KEGG: rpc:RPC_4926 hypothetical protein
YP_783794.1	PFAM: OmpA/MotB domain protein; KEGG: rpc:RPC_4927 OmpA/MotB
YP_783795.1	PFAM: polysaccharide deacetylase; KEGG: rpc:RPC_4928 polysaccharide deacetylase
YP_783796.1	molecular chaperone
YP_783797.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4931 periplasmic sensor signal transduction histidine kinase
YP_783798.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4932 two component transcriptional regulator, winged helix family
YP_783799.1	PFAM: Propeptide, PepSY amd peptidase M4; KEGG: rpc:RPC_4933 propeptide, PepSY amd peptidase M4
YP_783800.1	PFAM: cytochrome B561; KEGG: rpd:RPD_0923 cytochrome b561
YP_783802.1	KEGG: rpc:RPC_4934 hypothetical protein
YP_783803.1	KEGG: rpc:RPC_4628 hypothetical protein
YP_783805.1	isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway
YP_783806.1	Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate
YP_783807.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: rpa:RPA4822 possible alcohol dehydrogenase
YP_783808.1	KEGG: bja:blr0529 hypothetical protein
YP_783809.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:blr0530 hypothetical protein
YP_783810.1	activates fatty acids by binding to coenzyme A
YP_783811.1	TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpd:RPD_4412 ATP-dependent DNA helicase RecQ
YP_783812.1	TIGRFAM: putative regulatory protein, FmdB family; KEGG: rpb:RPB_4703 hypothetical protein
YP_783813.1	KEGG: rpa:RPA4828 hypothetical protein
YP_783814.1	KEGG: rpc:RPC_4938 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region
YP_783815.1	KEGG: rpb:RPB_4707 hypothetical protein
YP_783816.1	PFAM: polysaccharide export protein; KEGG: rpc:RPC_4940 polysaccharide export protein
YP_783817.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
YP_783818.1	KEGG: rpc:RPC_4942 hypothetical protein
YP_783819.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase