-- dump date 20140620_032402 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_778942.1 115522031 4358782 641..2065 1 NC_008435.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 2065 dnaA 4358782 dnaA Rhodopseudomonas palustris BisA53 chromosomal replication initiation protein YP_778942.1 641 D 316055 CDS YP_778943.1 115522032 4358783 2306..3424 1 NC_008435.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3424 4358783 RPE_0002 Rhodopseudomonas palustris BisA53 DNA polymerase III subunit beta YP_778943.1 2306 D 316055 CDS YP_778944.1 115522033 4358784 3588..4727 1 NC_008435.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4727 recF 4358784 recF Rhodopseudomonas palustris BisA53 recombination protein F YP_778944.1 3588 D 316055 CDS YP_778945.1 115522034 4358785 4860..6068 1 NC_008435.1 KEGG: rpc:RPC_0004 hypothetical protein; hypothetical protein 6068 4358785 RPE_0004 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778945.1 4860 D 316055 CDS YP_778946.1 115522035 4358786 6454..8895 1 NC_008435.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 8895 gyrB 4358786 gyrB Rhodopseudomonas palustris BisA53 DNA gyrase subunit B YP_778946.1 6454 D 316055 CDS YP_778947.1 115522036 4358787 complement(9047..10018) 1 NC_008435.1 PFAM: HWE histidine kinase; KEGG: nwi:Nwi_0559 HWE histidine kinase; signal transduction histidine kinase 10018 4358787 RPE_0006 Rhodopseudomonas palustris BisA53 signal transduction histidine kinase YP_778947.1 9047 R 316055 CDS YP_778948.1 115522037 4358788 10175..11107 1 NC_008435.1 KEGG: bja:blr2658 hypothetical protein; hypothetical protein 11107 4358788 RPE_0007 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778948.1 10175 D 316055 CDS YP_778949.1 115522038 4358789 complement(11109..11618) 1 NC_008435.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rpc:RPC_0007 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 11618 4358789 RPE_0008 Rhodopseudomonas palustris BisA53 AsnC family transcriptional regulator YP_778949.1 11109 R 316055 CDS YP_778950.1 115522039 4358790 complement(11769..11999) 1 NC_008435.1 KEGG: rpb:RPB_0008 hypothetical protein; hypothetical protein 11999 4358790 RPE_0009 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778950.1 11769 R 316055 CDS YP_778951.1 115522040 4358791 complement(12084..12401) 1 NC_008435.1 hypothetical protein 12401 4358791 RPE_0010 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778951.1 12084 R 316055 CDS YP_778952.1 115522041 4358792 complement(12494..12673) 1 NC_008435.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: rpc:RPC_0008 cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 12673 4358792 RPE_0011 Rhodopseudomonas palustris BisA53 cbb3-type cytochrome oxidase maturation protein YP_778952.1 12494 R 316055 CDS YP_778953.1 115522042 4358793 complement(12686..14860) 1 NC_008435.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rpc:RPC_0009 copper-translocating P-type ATPase; copper-translocating P-type ATPase 14860 4358793 RPE_0012 Rhodopseudomonas palustris BisA53 copper-translocating P-type ATPase YP_778953.1 12686 R 316055 CDS YP_778954.1 115522043 4358794 complement(14871..15371) 1 NC_008435.1 PFAM: FixH family protein; KEGG: rpc:RPC_0010 FixH; FixH family protein 15371 4358794 RPE_0013 Rhodopseudomonas palustris BisA53 FixH family protein YP_778954.1 14871 R 316055 CDS YP_778955.1 115522044 4358795 complement(15392..16849) 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpc:RPC_0011 4Fe-4S ferredoxin, iron-sulfur binding domain; 4Fe-4S ferredoxin 16849 4358795 RPE_0014 Rhodopseudomonas palustris BisA53 4Fe-4S ferredoxin YP_778955.1 15392 R 316055 CDS YP_778956.1 115522045 4358796 complement(16971..17852) 1 NC_008435.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; KEGG: rpc:RPC_0012 cytochrome c oxidase, cbb3-type, subunit III; cytochrome c oxidase, cbb3-type subunit III 17852 4358796 RPE_0015 Rhodopseudomonas palustris BisA53 cytochrome c oxidase, cbb3-type subunit III YP_778956.1 16971 R 316055 CDS YP_778957.1 115522046 4358797 complement(17859..18023) 1 NC_008435.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: rpc:RPC_0013 Cbb3-type cytochrome oxidase component; cbb3-type cytochrome oxidase subunit 18023 4358797 RPE_0016 Rhodopseudomonas palustris BisA53 cbb3-type cytochrome oxidase subunit YP_778957.1 17859 R 316055 CDS YP_778958.1 115522047 4357791 complement(18036..18770) 1 NC_008435.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 18770 4357791 RPE_0017 Rhodopseudomonas palustris BisA53 cbb3-type cytochrome c oxidase subunit II YP_778958.1 18036 R 316055 CDS YP_778959.1 115522048 4357792 complement(18783..20429) 1 NC_008435.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 20429 4357792 RPE_0018 Rhodopseudomonas palustris BisA53 cbb3-type cytochrome c oxidase subunit I YP_778959.1 18783 R 316055 CDS YP_778960.1 115522049 4357793 complement(20685..21605) 1 NC_008435.1 KEGG: rpc:RPC_0016 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; 2-dehydropantoate 2-reductase 21605 4357793 RPE_0019 Rhodopseudomonas palustris BisA53 2-dehydropantoate 2-reductase YP_778960.1 20685 R 316055 CDS YP_778961.1 115522050 4357794 complement(21866..22603) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpd:RPD_0728 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 22603 4357794 RPE_0020 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_778961.1 21866 R 316055 CDS YP_778962.1 115522051 4357795 complement(22712..23311) 1 NC_008435.1 PFAM: DSBA oxidoreductase; KEGG: rpd:RPD_0727 DsbA oxidoreductase; DSBA oxidoreductase 23311 4357795 RPE_0021 Rhodopseudomonas palustris BisA53 DSBA oxidoreductase YP_778962.1 22712 R 316055 CDS YP_778963.1 115522052 4357796 23525..24232 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: bja:bll0585 glutathione S-transferase family protein; glutathione S-transferase 24232 4357796 RPE_0022 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_778963.1 23525 D 316055 CDS YP_778964.1 115522053 4357797 complement(24432..25328) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_0020 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 25328 4357797 RPE_0023 Rhodopseudomonas palustris BisA53 short chain dehydrogenase YP_778964.1 24432 R 316055 CDS YP_778965.1 115522054 4357798 complement(25421..27181) 1 NC_008435.1 KEGG: rpc:RPC_0021 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 27181 4357798 RPE_0024 Rhodopseudomonas palustris BisA53 gamma-glutamyltransferase YP_778965.1 25421 R 316055 CDS YP_778966.1 115522055 4357799 27247..28629 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_0022 major facilitator superfamily MFS_1; major facilitator transporter 28629 4357799 RPE_0025 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_778966.1 27247 D 316055 CDS YP_778967.1 115522056 4357800 complement(28806..30410) 1 NC_008435.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 30410 purH 4357800 purH Rhodopseudomonas palustris BisA53 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_778967.1 28806 R 316055 CDS YP_778968.1 115522057 4357801 complement(30655..32409) 1 NC_008435.1 PFAM: Heparinase II/III family protein; KEGG: rpc:RPC_0024 heparinase II/III-like; heparinase II/III-like protein 32409 4357801 RPE_0027 Rhodopseudomonas palustris BisA53 heparinase II/III-like protein YP_778968.1 30655 R 316055 CDS YP_778969.1 115522058 4357802 complement(32688..34037) 1 NC_008435.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; Methyltransferase type 11; KEGG: rpc:RPC_0025 Fmu (Sun); sun protein 34037 4357802 RPE_0028 Rhodopseudomonas palustris BisA53 sun protein YP_778969.1 32688 R 316055 CDS YP_778970.1 115522059 4357803 34221..34469 1 NC_008435.1 PFAM: protein of unknown function DUF1674; KEGG: nha:Nham_0198 protein of unknown function DUF1674; hypothetical protein 34469 4357803 RPE_0029 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778970.1 34221 D 316055 CDS YP_778971.1 115522060 4357804 complement(34487..35251) 1 NC_008435.1 KEGG: rpb:RPB_0367 conserved hypothetical protein PA1030; hypothetical protein 35251 4357804 RPE_0030 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778971.1 34487 R 316055 CDS YP_778972.1 115522061 4357805 complement(35211..35591) 1 NC_008435.1 KEGG: rpb:RPB_0368 hypothetical protein; hypothetical protein 35591 4357805 RPE_0031 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778972.1 35211 R 316055 CDS YP_778973.1 115522062 4357806 35733..36311 1 NC_008435.1 PFAM: nuclease (SNase domain protein); KEGG: rpc:RPC_0029 nuclease (SNase-like); nuclease 36311 4357806 RPE_0032 Rhodopseudomonas palustris BisA53 nuclease YP_778973.1 35733 D 316055 CDS YP_778974.1 115522063 4357807 complement(36314..38068) 1 NC_008435.1 PFAM: Alkaline phosphatase; KEGG: rpc:RPC_0030 alkaline phosphatase; alkaline phosphatase 38068 4357807 RPE_0033 Rhodopseudomonas palustris BisA53 alkaline phosphatase YP_778974.1 36314 R 316055 CDS YP_778975.1 115522064 4357808 complement(38315..39652) 1 NC_008435.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 39652 4357808 RPE_0034 Rhodopseudomonas palustris BisA53 argininosuccinate synthase YP_778975.1 38315 R 316055 CDS YP_778976.1 115522065 4357740 complement(39755..40534) 1 NC_008435.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: rpc:RPC_0032 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 40534 4357740 RPE_0035 Rhodopseudomonas palustris BisA53 PA-phosphatase-like phosphoesterase YP_778976.1 39755 R 316055 CDS YP_778977.1 115522066 4357741 complement(40591..41127) 1 NC_008435.1 KEGG: rpd:RPD_0711 hypothetical protein; hypothetical protein 41127 4357741 RPE_0036 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778977.1 40591 R 316055 CDS YP_778978.1 115522067 4357742 complement(41127..41729) 1 NC_008435.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: rpd:RPD_0710 metal-dependent phosphohydrolase, HD subdomain; metal dependent phosphohydrolase 41729 4357742 RPE_0037 Rhodopseudomonas palustris BisA53 metal dependent phosphohydrolase YP_778978.1 41127 R 316055 CDS YP_778979.1 115522068 4357743 complement(41726..42937) 1 NC_008435.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: rpd:RPD_0709 hypothetical protein; radical SAM protein 42937 4357743 RPE_0038 Rhodopseudomonas palustris BisA53 radical SAM protein YP_778979.1 41726 R 316055 CDS YP_778980.1 115522069 4357744 complement(43137..43727) 1 NC_008435.1 KEGG: rpc:RPC_0036 hypothetical protein; hypothetical protein 43727 4357744 RPE_0039 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778980.1 43137 R 316055 CDS YP_778981.1 115522070 4357745 44027..45001 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpd:RPD_0707 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 45001 4357745 RPE_0040 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_778981.1 44027 D 316055 CDS YP_778982.1 115522071 4357746 45187..46479 1 NC_008435.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_0038 amine oxidase; amine oxidase 46479 4357746 RPE_0041 Rhodopseudomonas palustris BisA53 amine oxidase YP_778982.1 45187 D 316055 CDS YP_778983.1 115522072 4357747 complement(46533..46784) 1 NC_008435.1 hypothetical protein 46784 4357747 RPE_0042 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778983.1 46533 R 316055 CDS YP_778984.1 115522073 4357748 46848..47357 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; FR47 domain protein; KEGG: rpc:RPC_0039 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 47357 4357748 RPE_0043 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_778984.1 46848 D 316055 CDS YP_778985.1 115522074 4357749 47450..47992 1 NC_008435.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 47992 4357749 RPE_0044 Rhodopseudomonas palustris BisA53 inorganic pyrophosphatase YP_778985.1 47450 D 316055 CDS YP_778986.1 115522075 4357750 48027..49508 1 NC_008435.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rpc:RPC_0041 peptidase M20; hypothetical protein 49508 4357750 RPE_0045 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778986.1 48027 D 316055 CDS YP_778987.1 115522076 4357751 complement(49590..51290) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4406 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 51290 4357751 RPE_0046 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_778987.1 49590 R 316055 CDS YP_778988.1 115522077 4357752 complement(51616..52503) 1 NC_008435.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 52503 4357752 RPE_0047 Rhodopseudomonas palustris BisA53 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_778988.1 51616 R 316055 CDS YP_778989.1 115522078 4357753 complement(52514..52837) 1 NC_008435.1 PFAM: protein of unknown function DUF167; KEGG: rpc:RPC_0058 protein of unknown function DUF167; hypothetical protein 52837 4357753 RPE_0048 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778989.1 52514 R 316055 CDS YP_778990.1 115522079 4357754 complement(52859..53149) 1 NC_008435.1 PFAM: protein of unknown function YGGT; KEGG: rpd:RPD_0692 protein of unknown function YGGT; hypothetical protein 53149 4357754 RPE_0049 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778990.1 52859 R 316055 CDS YP_778991.1 115522080 4358311 complement(53521..53721) 1 NC_008435.1 KEGG: rpd:RPD_0690 protein of unknown function DUF1486; hypothetical protein 53721 4358311 RPE_0050 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778991.1 53521 R 316055 CDS YP_778992.1 115522081 4358312 complement(53834..54736) 1 NC_008435.1 hypothetical protein 54736 4358312 RPE_0051 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778992.1 53834 R 316055 CDS YP_778993.1 115522082 4358313 complement(54865..55350) 1 NC_008435.1 PFAM: protein of unknown function DUF1486; KEGG: rpd:RPD_0690 protein of unknown function DUF1486; hypothetical protein 55350 4358313 RPE_0052 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778993.1 54865 R 316055 CDS YP_778994.1 115522083 4358314 complement(55426..56265) 1 NC_008435.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 56265 4358314 RPE_0053 Rhodopseudomonas palustris BisA53 glutamine amidotransferase YP_778994.1 55426 R 316055 CDS YP_778995.1 115522084 4358315 complement(56410..57189) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_0055 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 57189 4358315 RPE_0054 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_778995.1 56410 R 316055 CDS YP_778996.1 115522085 4358316 complement(57409..57885) 1 NC_008435.1 PFAM: protein of unknown function DUF1332; KEGG: rpc:RPC_0054 protein of unknown function DUF1332; hypothetical protein 57885 4358316 RPE_0055 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778996.1 57409 R 316055 CDS YP_778997.1 115522086 4358317 complement(58031..59440) 1 NC_008435.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rpc:RPC_0052 adenylate/guanylate cyclase; adenylate/guanylate cyclase 59440 4358317 RPE_0056 Rhodopseudomonas palustris BisA53 adenylate/guanylate cyclase YP_778997.1 58031 R 316055 CDS YP_778998.1 115522087 4358318 complement(59437..60843) 1 NC_008435.1 PFAM: cytochrome P450; KEGG: rpb:RPB_0116 cytochrome P450; cytochrome P450 60843 4358318 RPE_0057 Rhodopseudomonas palustris BisA53 cytochrome P450 YP_778998.1 59437 R 316055 CDS YP_778999.1 115522088 4358319 61106..62788 1 NC_008435.1 PFAM: protein of unknown function DUF894, DitE; major facilitator superfamily MFS_1; KEGG: rpd:RPD_0685 protein of unknown function DUF894, DitE; hypothetical protein 62788 4358319 RPE_0058 Rhodopseudomonas palustris BisA53 hypothetical protein YP_778999.1 61106 D 316055 CDS YP_779000.1 115522089 4358320 complement(62808..63023) 1 NC_008435.1 KEGG: rpd:RPD_0684 hypothetical protein; hypothetical protein 63023 4358320 RPE_0059 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779000.1 62808 R 316055 CDS YP_779001.1 115522090 4358321 63403..69405 1 NC_008435.1 KEGG: rpc:RPC_3080 conserved hypothetical protein, putative DNA helicase; putative DNA helicase 69405 4358321 RPE_0060 Rhodopseudomonas palustris BisA53 putative DNA helicase YP_779001.1 63403 D 316055 CDS YP_779002.1 115522091 4358322 69841..70302 1 NC_008435.1 PFAM: protein of unknown function DUF1311; hypothetical protein 70302 4358322 RPE_0061 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779002.1 69841 D 316055 CDS YP_779003.1 115522092 4358324 complement(70763..72496) 1 NC_008435.1 PFAM: HemY domain protein; KEGG: rpc:RPC_0049 HemY-like; HemY domain-containing protein 72496 4358324 RPE_0062 Rhodopseudomonas palustris BisA53 HemY domain-containing protein YP_779003.1 70763 R 316055 CDS YP_779004.1 115522093 4358325 complement(72504..73880) 1 NC_008435.1 KEGG: rpc:RPC_0048 hypothetical protein; hypothetical protein 73880 4358325 RPE_0063 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779004.1 72504 R 316055 CDS YP_779005.1 115522094 4358326 complement(73938..74684) 1 NC_008435.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: rpc:RPC_0047 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 74684 4358326 RPE_0064 Rhodopseudomonas palustris BisA53 uroporphyrinogen III synthase HEM4 YP_779005.1 73938 R 316055 CDS YP_779006.1 115522095 4358327 74813..75982 1 NC_008435.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 75982 4358327 RPE_0065 Rhodopseudomonas palustris BisA53 putative DNA-binding/iron metalloprotein/AP endonuclease YP_779006.1 74813 D 316055 CDS YP_779007.1 115522096 4357654 76221..77207 1 NC_008435.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 77207 gpsA 4357654 gpsA Rhodopseudomonas palustris BisA53 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_779007.1 76221 D 316055 CDS YP_779008.1 115522097 4357655 77211..77624 1 NC_008435.1 PFAM: protein of unknown function DUF55; KEGG: rpd:RPD_0472 protein of unknown function DUF589; hypothetical protein 77624 4357655 RPE_0067 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779008.1 77211 D 316055 CDS YP_779009.1 115522098 4357656 77843..78505 1 NC_008435.1 KEGG: rpc:RPC_0043 hypothetical protein; hypothetical protein 78505 4357656 RPE_0068 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779009.1 77843 D 316055 CDS YP_779010.1 115522099 4357657 79015..80961 1 NC_008435.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 80961 4357657 RPE_0069 Rhodopseudomonas palustris BisA53 acetyl-CoA synthetase YP_779010.1 79015 D 316055 CDS YP_779011.1 115522100 4357658 complement(82504..83118) 1 NC_008435.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_1939 hypothetical protein; type 12 methyltransferase 83118 4357658 RPE_0070 Rhodopseudomonas palustris BisA53 type 12 methyltransferase YP_779011.1 82504 R 316055 CDS YP_779012.1 115522101 4357659 complement(83681..84601) 1 NC_008435.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_1129 phenylacetic acid degradation-related protein; hypothetical protein 84601 4357659 RPE_0071 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779012.1 83681 R 316055 CDS YP_779013.1 115522102 4357660 complement(84598..85152) 1 NC_008435.1 hypothetical protein 85152 4357660 RPE_0072 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779013.1 84598 R 316055 CDS YP_779014.1 115522103 4357661 complement(85168..86313) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA0995 probable acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 86313 4357661 RPE_0073 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_779014.1 85168 R 316055 CDS YP_779015.1 115522104 4357662 complement(86466..86966) 1 NC_008435.1 TIGRFAM: YbhB and YbcL; PFAM: PEBP family protein; KEGG: nha:Nham_3239 YbhB and YbcL; YbhB and YbcL 86966 4357662 RPE_0074 Rhodopseudomonas palustris BisA53 YbhB and YbcL YP_779015.1 86466 R 316055 CDS YP_779016.1 115522105 4357663 87406..87840 1 NC_008435.1 hypothetical protein 87840 4357663 RPE_0075 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779016.1 87406 D 316055 CDS YP_779017.1 115522106 4357664 87979..88896 1 NC_008435.1 KEGG: bur:Bcep18194_B0441 outer membrane protein, haemagluttinin-like; hypothetical protein 88896 4357664 RPE_0076 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779017.1 87979 D 316055 CDS YP_779018.1 115522107 4357665 88997..89326 1 NC_008435.1 hypothetical protein 89326 4357665 RPE_0077 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779018.1 88997 D 316055 CDS YP_779019.1 115522108 4357666 89385..91142 1 NC_008435.1 PFAM: Carbamoyltransferase; KEGG: rpc:RPC_1437 carbamoyltransferase; carbamoyltransferase 91142 4357666 RPE_0078 Rhodopseudomonas palustris BisA53 carbamoyltransferase YP_779019.1 89385 D 316055 CDS YP_779020.1 115522109 4357667 91124..91801 1 NC_008435.1 hypothetical protein 91801 4357667 RPE_0079 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779020.1 91124 D 316055 CDS YP_779021.1 115522110 4357668 91837..92562 1 NC_008435.1 KEGG: sdn:Sden_3472 hypothetical protein; hypothetical protein 92562 4357668 RPE_0080 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779021.1 91837 D 316055 CDS YP_779022.1 115522111 4357669 92597..93859 1 NC_008435.1 PFAM: cytochrome P450; KEGG: bld:BLi00771 cytochrome P450 enzyme; RBL02770; cytochrome P450 93859 4357669 RPE_0081 Rhodopseudomonas palustris BisA53 cytochrome P450 YP_779022.1 92597 D 316055 CDS YP_779023.1 115522112 4357670 93972..94583 1 NC_008435.1 TIGRFAM: methyltransferase FkbM family; KEGG: rbe:RBE_0190 hypothetical protein; FkbM family methyltransferase 94583 4357670 RPE_0082 Rhodopseudomonas palustris BisA53 FkbM family methyltransferase YP_779023.1 93972 D 316055 CDS YP_779024.1 115522113 4358050 94723..95466 1 NC_008435.1 SMART: nuclease (SNase domain protein); KEGG: rpd:RPD_1131 nuclease (SNase-like); nuclease 95466 4358050 RPE_0083 Rhodopseudomonas palustris BisA53 nuclease YP_779024.1 94723 D 316055 CDS YP_779025.1 115522114 4358051 complement(95497..96387) 1 NC_008435.1 PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rpb:RPB_1714 transglutaminase-like; transglutaminase domain-containing protein 96387 4358051 RPE_0084 Rhodopseudomonas palustris BisA53 transglutaminase domain-containing protein YP_779025.1 95497 R 316055 CDS YP_779026.1 115522115 4358052 complement(96384..98822) 1 NC_008435.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rpa:RPA3753 DUF404; hypothetical protein 98822 4358052 RPE_0085 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779026.1 96384 R 316055 CDS YP_779027.1 115522116 4358053 complement(98882..102190) 1 NC_008435.1 PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rpc:RPC_1701 transglutaminase-like; transglutaminase domain-containing protein 102190 4358053 RPE_0086 Rhodopseudomonas palustris BisA53 transglutaminase domain-containing protein YP_779027.1 98882 R 316055 CDS YP_779028.1 115522117 4358054 complement(102253..102564) 1 NC_008435.1 hypothetical protein 102564 4358054 RPE_0087 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779028.1 102253 R 316055 CDS YP_779029.1 115522118 4358055 102832..103260 1 NC_008435.1 hypothetical protein 103260 4358055 RPE_0088 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779029.1 102832 D 316055 CDS YP_779030.1 115522119 4358056 103330..103572 1 NC_008435.1 hypothetical protein 103572 4358056 RPE_0089 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779030.1 103330 D 316055 CDS YP_779031.1 115522120 4358057 complement(103550..105802) 1 NC_008435.1 KEGG: rpc:RPC_0583 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with AS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 105802 4358057 RPE_0090 Rhodopseudomonas palustris BisA53 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_779031.1 103550 R 316055 CDS YP_779032.1 115522121 4358058 106170..107120 1 NC_008435.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 107120 mepA 4358058 mepA Rhodopseudomonas palustris BisA53 penicillin-insensitive murein endopeptidase YP_779032.1 106170 D 316055 CDS YP_779033.1 115522122 4358059 107449..108228 1 NC_008435.1 KEGG: aba:Acid345_3759 hypothetical protein; hypothetical protein 108228 4358059 RPE_0092 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779033.1 107449 D 316055 CDS YP_779034.1 115522123 4358060 complement(108475..110274) 1 NC_008435.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 110274 4358060 RPE_0093 Rhodopseudomonas palustris BisA53 potassium/proton antiporter YP_779034.1 108475 R 316055 CDS YP_779035.1 115522124 4358061 110652..111476 1 NC_008435.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: rpb:RPB_0058 methionine aminopeptidase, type I; methionine aminopeptidase 111476 4358061 RPE_0094 Rhodopseudomonas palustris BisA53 methionine aminopeptidase YP_779035.1 110652 D 316055 CDS YP_779036.1 115522125 4358062 111820..112365 1 NC_008435.1 hypothetical protein 112365 4358062 RPE_0095 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779036.1 111820 D 316055 CDS YP_779037.1 115522126 4358063 112747..113889 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sme:SMc04289 hypothetical protein; TRAP dicarboxylate transporter 113889 4358063 RPE_0096 Rhodopseudomonas palustris BisA53 TRAP dicarboxylate transporter YP_779037.1 112747 D 316055 CDS YP_779038.1 115522127 4358064 113994..114707 1 NC_008435.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: sme:SMc04287 hypothetical protein; tripartite ATP-independent periplasmic transporter DctQ 114707 4358064 RPE_0097 Rhodopseudomonas palustris BisA53 tripartite ATP-independent periplasmic transporter DctQ YP_779038.1 113994 D 316055 CDS YP_779039.1 115522128 4358065 114704..116620 1 NC_008435.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sme:SMc04283 putative transmembrane protein; TRAP C4-dicarboxylate transport system permease DctM 116620 4358065 RPE_0098 Rhodopseudomonas palustris BisA53 TRAP C4-dicarboxylate transport system permease DctM YP_779039.1 114704 D 316055 CDS YP_779040.1 115522129 4358066 complement(116856..117449) 1 NC_008435.1 PFAM: Methyltransferase type 11; KEGG: tdn:Tmden_0189 methylase involved in ubiquinone/menaquinone biosynthesis-like; type 11 methyltransferase 117449 4358066 RPE_0099 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_779040.1 116856 R 316055 CDS YP_779041.1 115522130 4358067 complement(117559..118131) 1 NC_008435.1 KEGG: bxe:Bxe_A3045 hypothetical protein; hypothetical protein 118131 4358067 RPE_0100 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779041.1 117559 R 316055 CDS YP_779042.1 115522131 4357894 complement(118156..119133) 1 NC_008435.1 PFAM: Ku domain protein; KEGG: rpb:RPB_0698 Ku-like protein; Ku domain-containing protein 119133 4357894 RPE_0101 Rhodopseudomonas palustris BisA53 Ku domain-containing protein YP_779042.1 118156 R 316055 CDS YP_779043.1 115522132 4357895 119282..119512 1 NC_008435.1 KEGG: rpc:RPC_0576 hypothetical protein; hypothetical protein 119512 4357895 RPE_0102 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779043.1 119282 D 316055 CDS YP_779044.1 115522133 4357896 119780..120496 1 NC_008435.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 120496 radC 4357896 radC Rhodopseudomonas palustris BisA53 DNA repair protein RadC YP_779044.1 119780 D 316055 CDS YP_779045.1 115522134 4357897 complement(120683..121396) 1 NC_008435.1 KEGG: rpd:RPD_0256 hypothetical protein; hypothetical protein 121396 4357897 RPE_0104 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779045.1 120683 R 316055 CDS YP_779046.1 115522135 4357898 complement(121399..122379) 1 NC_008435.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rpc:RPC_0573 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 122379 4357898 RPE_0105 Rhodopseudomonas palustris BisA53 D-isomer specific 2-hydroxyacid dehydrogenase YP_779046.1 121399 R 316055 CDS YP_779047.1 115522136 4357899 complement(122391..123176) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_0572 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 123176 4357899 RPE_0106 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport systems inner membrane component YP_779047.1 122391 R 316055 CDS YP_779048.1 115522137 4357900 complement(123173..123988) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0571 ABC transporter related; ABC transporter-like protein 123988 4357900 RPE_0107 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779048.1 123173 R 316055 CDS YP_779049.1 115522138 4357901 complement(123997..125127) 1 NC_008435.1 KEGG: rpa:RPA0470 perplasmic binding protein of ABC transporter; ABC transporter periplasmic-binding protein 125127 4357901 RPE_0108 Rhodopseudomonas palustris BisA53 ABC transporter periplasmic-binding protein YP_779049.1 123997 R 316055 CDS YP_779050.1 115522139 4357902 125254..126066 1 NC_008435.1 PFAM: Creatininase; KEGG: rpb:RPB_0569 creatininase; creatininase 126066 4357902 RPE_0109 Rhodopseudomonas palustris BisA53 creatininase YP_779050.1 125254 D 316055 CDS YP_779051.1 115522140 4357903 126204..126470 1 NC_008435.1 KEGG: rpc:RPC_0568 hypothetical protein; hypothetical protein 126470 4357903 RPE_0110 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779051.1 126204 D 316055 CDS YP_779052.1 115522141 4357904 complement(126579..128201) 1 NC_008435.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: rpc:RPC_0567 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase 128201 4357904 RPE_0111 Rhodopseudomonas palustris BisA53 ferredoxin-dependent glutamate synthase YP_779052.1 126579 R 316055 CDS YP_779053.1 115522142 4357905 128313..129455 1 NC_008435.1 KEGG: rpd:RPD_0263 hypothetical protein; hypothetical protein 129455 4357905 RPE_0112 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779053.1 128313 D 316055 CDS YP_779054.1 115522143 4357906 129448..130764 1 NC_008435.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rpd:RPD_0264 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 130764 4357906 RPE_0113 Rhodopseudomonas palustris BisA53 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_779054.1 129448 D 316055 CDS YP_779055.1 115522144 4357907 130866..131864 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bja:blr0103 probable oxidoreductase; alcohol dehydrogenase 131864 4357907 RPE_0114 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_779055.1 130866 D 316055 CDS YP_779056.1 115522145 4357909 complement(132134..135013) 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: nmu:Nmul_A0911 tetratricopeptide TPR_4; type 12 methyltransferase 135013 4357909 RPE_0115 Rhodopseudomonas palustris BisA53 type 12 methyltransferase YP_779056.1 132134 R 316055 CDS YP_779057.1 115522146 4359784 135250..135846 1 NC_008435.1 PFAM: protein of unknown function DUF937; KEGG: rpc:RPC_0555 protein of unknown function DUF937; hypothetical protein 135846 4359784 RPE_0116 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779057.1 135250 D 316055 CDS YP_779058.1 115522147 4359785 135940..136227 1 NC_008435.1 KEGG: rpc:RPC_0554 hypothetical protein; hypothetical protein 136227 4359785 RPE_0117 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779058.1 135940 D 316055 CDS YP_779059.1 115522148 4359786 complement(136224..137006) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility C-terminal domain; KEGG: rpc:RPC_0553 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 137006 4359786 RPE_0118 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_779059.1 136224 R 316055 CDS YP_779060.1 115522149 4359787 137232..138299 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_0270 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 138299 4359787 RPE_0119 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_779060.1 137232 D 316055 CDS YP_779061.1 115522150 4359788 138327..139487 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpd:RPD_0271 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 139487 4359788 RPE_0120 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_779061.1 138327 D 316055 CDS YP_779062.1 115522151 4359789 139536..140339 1 NC_008435.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_0552 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 140339 4359789 RPE_0121 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase/isomerase YP_779062.1 139536 D 316055 CDS YP_779063.1 115522152 4359790 140475..141239 1 NC_008435.1 KEGG: rpc:RPC_0551 nuclease (SNase-like); nuclease 141239 4359790 RPE_0122 Rhodopseudomonas palustris BisA53 nuclease YP_779063.1 140475 D 316055 CDS YP_779064.1 115522153 4359791 141260..142741 1 NC_008435.1 PFAM: peptidase M48, Ste24p; KEGG: rpc:RPC_0550 peptidase M48, Ste24p; peptidase M48, Ste24p 142741 4359791 RPE_0123 Rhodopseudomonas palustris BisA53 peptidase M48, Ste24p YP_779064.1 141260 D 316055 CDS YP_779065.1 115522154 4359792 complement(142833..143909) 1 NC_008435.1 PFAM: transcription factor CarD; KEGG: rpc:RPC_0548 transcriptional regulator, CarD family; CarD family transcriptional regulator 143909 4359792 RPE_0124 Rhodopseudomonas palustris BisA53 CarD family transcriptional regulator YP_779065.1 142833 R 316055 CDS YP_779066.1 115522155 4359793 complement(144127..144465) 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: bja:bll0157 ferredoxin; 4Fe-4S ferredoxin 144465 4359793 RPE_0125 Rhodopseudomonas palustris BisA53 4Fe-4S ferredoxin YP_779066.1 144127 R 316055 CDS YP_779067.1 115522156 4359794 complement(144540..144809) 1 NC_008435.1 PFAM: RNA-binding S4 domain protein; KEGG: rpd:RPD_0280 RNA-binding S4; RNA-binding S4 domain-containing protein 144809 4359794 RPE_0126 Rhodopseudomonas palustris BisA53 RNA-binding S4 domain-containing protein YP_779067.1 144540 R 316055 CDS YP_779068.1 115522157 4359795 complement(144858..148208) 1 NC_008435.1 PFAM: helicase domain protein; KEGG: rpc:RPC_0545 helicase-like; helicase domain-containing protein 148208 4359795 RPE_0127 Rhodopseudomonas palustris BisA53 helicase domain-containing protein YP_779068.1 144858 R 316055 CDS YP_779069.1 115522158 4359796 complement(148561..149472) 1 NC_008435.1 KEGG: rpc:RPC_0544 hypothetical protein; hypothetical protein 149472 4359796 RPE_0128 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779069.1 148561 R 316055 CDS YP_779070.1 115522159 4359797 149773..150078 1 NC_008435.1 required for 70S ribosome assembly; 50S ribosomal protein L28 150078 rpmB 4359797 rpmB Rhodopseudomonas palustris BisA53 50S ribosomal protein L28 YP_779070.1 149773 D 316055 CDS YP_779071.1 115522160 4359798 150348..153530 1 NC_008435.1 KEGG: rpc:RPC_0542 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 153530 4359798 RPE_0130 Rhodopseudomonas palustris BisA53 multi-sensor hybrid histidine kinase YP_779071.1 150348 D 316055 CDS YP_779072.1 115522161 4359799 complement(153619..154686) 1 NC_008435.1 KEGG: rpc:RPC_0541 hypothetical protein; hypothetical protein 154686 4359799 RPE_0131 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779072.1 153619 R 316055 CDS YP_779073.1 115522162 4359800 complement(154945..156843) 1 NC_008435.1 KEGG: rpc:RPC_0540 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase, CobT subunit; SMART: von Willebrand factor, type A; cobalt chelatase large subunit 156843 4359800 RPE_0132 Rhodopseudomonas palustris BisA53 cobalt chelatase large subunit YP_779073.1 154945 R 316055 CDS YP_779074.1 115522163 4359801 complement(156840..157340) 1 NC_008435.1 PFAM: protein of unknown function DUF29; KEGG: rpc:RPC_0539 protein of unknown function DUF29; hypothetical protein 157340 4359801 RPE_0133 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779074.1 156840 R 316055 CDS YP_779075.1 115522164 4359750 complement(157353..157847) 1 NC_008435.1 PFAM: protein of unknown function DUF29; KEGG: rpc:RPC_0539 protein of unknown function DUF29; hypothetical protein 157847 4359750 RPE_0134 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779075.1 157353 R 316055 CDS YP_779076.1 115522165 4359751 complement(157974..158969) 1 NC_008435.1 KEGG: rpc:RPC_0538 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; cobalt chelatase small subunit 158969 4359751 RPE_0135 Rhodopseudomonas palustris BisA53 cobalt chelatase small subunit YP_779076.1 157974 R 316055 CDS YP_779077.1 115522166 4359752 159260..159898 1 NC_008435.1 KEGG: rpc:RPC_0537 DedA family; DedA family protein 159898 4359752 RPE_0136 Rhodopseudomonas palustris BisA53 DedA family protein YP_779077.1 159260 D 316055 CDS YP_779078.1 115522167 4359753 complement(159941..160588) 1 NC_008435.1 PFAM: heat shock protein DnaJ domain protein; KEGG: rpc:RPC_0536 heat shock protein DnaJ-like; heat shock protein DnaJ domain-containing protein 160588 4359753 RPE_0137 Rhodopseudomonas palustris BisA53 heat shock protein DnaJ domain-containing protein YP_779078.1 159941 R 316055 CDS YP_779079.1 115522168 4359754 160694..160966 1 NC_008435.1 PFAM: BolA family protein; KEGG: rpc:RPC_0535 BolA-like protein; morphology/transcription regulator BolA family protein 160966 4359754 RPE_0138 Rhodopseudomonas palustris BisA53 morphology/transcription regulator BolA family protein YP_779079.1 160694 D 316055 CDS YP_779080.1 115522169 4359755 complement(161055..162500) 1 NC_008435.1 PFAM: protein of unknown function DUF949; KEGG: rpc:RPC_0527 protein of unknown function DUF949; hypothetical protein 162500 4359755 RPE_0139 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779080.1 161055 R 316055 CDS YP_779081.1 115522170 4359756 complement(162803..163765) 1 NC_008435.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 163765 4359756 RPE_0140 Rhodopseudomonas palustris BisA53 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_779081.1 162803 R 316055 CDS YP_779082.1 115522171 4359757 complement(163912..164892) 1 NC_008435.1 TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: rpc:RPC_0530 tyrosine recombinase XerD; tyrosine recombinase XerD 164892 4359757 RPE_0141 Rhodopseudomonas palustris BisA53 tyrosine recombinase XerD YP_779082.1 163912 R 316055 CDS YP_779083.1 115522172 4359758 complement(164902..165108) 1 NC_008435.1 KEGG: rpd:RPD_0295 hypothetical protein; hypothetical protein 165108 4359758 RPE_0142 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779083.1 164902 R 316055 CDS YP_779084.1 115522173 4359759 165257..165874 1 NC_008435.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 165874 4359759 RPE_0143 Rhodopseudomonas palustris BisA53 shikimate kinase YP_779084.1 165257 D 316055 CDS YP_779085.1 115522174 4359760 165871..167016 1 NC_008435.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 167016 aroB 4359760 aroB Rhodopseudomonas palustris BisA53 3-dehydroquinate synthase YP_779085.1 165871 D 316055 CDS YP_779086.1 115522175 4359761 167093..168436 1 NC_008435.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rpa:RPA0502 probable HlyC/CorC family of transporters with 2 CBS domains; hypothetical protein 168436 4359761 RPE_0145 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779086.1 167093 D 316055 CDS YP_779087.1 115522176 4359762 complement(168646..171489) 1 NC_008435.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 171489 4359762 RPE_0146 Rhodopseudomonas palustris BisA53 preprotein translocase subunit SecA YP_779087.1 168646 R 316055 CDS YP_779088.1 115522177 4359763 171831..172760 1 NC_008435.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpc:RPC_0525 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 172760 4359763 RPE_0147 Rhodopseudomonas palustris BisA53 PpiC-type peptidyl-prolyl cis-trans isomerase YP_779088.1 171831 D 316055 CDS YP_779089.1 115522178 4359764 172964..174205 1 NC_008435.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 174205 argJ 4359764 argJ Rhodopseudomonas palustris BisA53 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_779089.1 172964 D 316055 CDS YP_779090.1 115522179 4359765 174333..174746 1 NC_008435.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: rpd:RPD_0110 NUDIX hydrolase; mutator MutT protein 174746 4359765 RPE_0149 Rhodopseudomonas palustris BisA53 mutator MutT protein YP_779090.1 174333 D 316055 CDS YP_779091.1 115522180 4359766 complement(174897..175736) 1 NC_008435.1 PFAM: Methyltransferase type 11; KEGG: rpc:RPC_0522 methyltransferase; type 11 methyltransferase 175736 4359766 RPE_0150 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_779091.1 174897 R 316055 CDS YP_779092.1 115522181 4357927 complement(175782..176090) 1 NC_008435.1 KEGG: rpd:RPD_0108 hypothetical protein; hypothetical protein 176090 4357927 RPE_0151 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779092.1 175782 R 316055 CDS YP_779093.1 115522182 4357928 176232..177053 1 NC_008435.1 PFAM: phosphoribosyltransferase; KEGG: rpd:RPD_0107 phosphoribosyltransferase; phosphoribosyltransferase 177053 4357928 RPE_0152 Rhodopseudomonas palustris BisA53 phosphoribosyltransferase YP_779093.1 176232 D 316055 CDS YP_779094.1 115522183 4357929 177085..177360 1 NC_008435.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: rpc:RPC_0519 glutaredoxin, GrxC; glutaredoxin GrxC 177360 4357929 RPE_0153 Rhodopseudomonas palustris BisA53 glutaredoxin GrxC YP_779094.1 177085 D 316055 CDS YP_779095.1 115522184 4357930 177357..178247 1 NC_008435.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rpc:RPC_0518 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 178247 4357930 RPE_0154 Rhodopseudomonas palustris BisA53 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_779095.1 177357 D 316055 CDS YP_779096.1 115522185 4357931 178244..178753 1 NC_008435.1 PFAM: protein of unknown function DUF1178; KEGG: rpb:RPB_0023 protein of unknown function DUF1178; hypothetical protein 178753 4357931 RPE_0155 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779096.1 178244 D 316055 CDS YP_779097.1 115522186 4357932 complement(178967..179866) 1 NC_008435.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_0516 protein of unknown function DUF6, transmembrane; hypothetical protein 179866 4357932 RPE_0156 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779097.1 178967 R 316055 CDS YP_779098.1 115522187 4357933 complement(180211..180972) 1 NC_008435.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 180972 4357933 RPE_0157 Rhodopseudomonas palustris BisA53 3-demethylubiquinone-9 3-methyltransferase YP_779098.1 180211 R 316055 CDS YP_779099.1 115522188 4357934 181302..182555 1 NC_008435.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 182555 4357934 RPE_0158 Rhodopseudomonas palustris BisA53 aspartate kinase YP_779099.1 181302 D 316055 CDS YP_779100.1 115522189 4357935 182877..185144 1 NC_008435.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: rpc:RPC_0513 PTSINtr with GAF domain, PtsP; phosphoenolpyruvate-protein phosphotransferase PtsP 185144 4357935 RPE_0159 Rhodopseudomonas palustris BisA53 phosphoenolpyruvate-protein phosphotransferase PtsP YP_779100.1 182877 D 316055 CDS YP_779101.1 115522190 4357936 185202..186281 1 NC_008435.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 186281 prfA 4357936 prfA Rhodopseudomonas palustris BisA53 peptide chain release factor 1 YP_779101.1 185202 D 316055 CDS YP_779102.1 115522191 4357937 186382..187323 1 NC_008435.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; Methyltransferase type 11; KEGG: rpc:RPC_0511 modification methylase, HemK family; HemK family modification methylase 187323 4357937 RPE_0161 Rhodopseudomonas palustris BisA53 HemK family modification methylase YP_779102.1 186382 D 316055 CDS YP_779103.1 115522192 4357938 187801..188556 1 NC_008435.1 KEGG: rpc:RPC_0510 hypothetical protein; hypothetical protein 188556 4357938 RPE_0162 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779103.1 187801 D 316055 CDS YP_779104.1 115522193 4357939 complement(188654..189421) 1 NC_008435.1 PFAM: Methyltransferase type 11; KEGG: rpc:RPC_0509 methyltransferase type 11; type 11 methyltransferase 189421 4357939 RPE_0163 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_779104.1 188654 R 316055 CDS YP_779105.1 115522194 4357940 189572..190339 1 NC_008435.1 PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_0508 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 190339 4357940 RPE_0164 Rhodopseudomonas palustris BisA53 hydroxyacylglutathione hydrolase YP_779105.1 189572 D 316055 CDS YP_779106.1 115522195 4357941 190336..190779 1 NC_008435.1 PFAM: protein of unknown function DUF985; KEGG: rpc:RPC_0507 protein of unknown function DUF985; hypothetical protein 190779 4357941 RPE_0165 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779106.1 190336 D 316055 CDS YP_779107.1 115522196 4357942 complement(190950..191825) 1 NC_008435.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_0506 protein of unknown function DUF6, transmembrane; hypothetical protein 191825 4357942 RPE_0166 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779107.1 190950 R 316055 CDS YP_779108.1 115522197 4357943 complement(191854..192579) 1 NC_008435.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Acetoacetyl-CoA reductase; KEGG: rpc:RPC_0505 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase 192579 4357943 RPE_0167 Rhodopseudomonas palustris BisA53 acetoacetyl-CoA reductase YP_779108.1 191854 R 316055 CDS YP_779109.1 115522198 4357944 complement(192841..194019) 1 NC_008435.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 194019 4357944 RPE_0168 Rhodopseudomonas palustris BisA53 acetyl-CoA acetyltransferase YP_779109.1 192841 R 316055 CDS YP_779110.1 115522199 4357910 194338..194943 1 NC_008435.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: rpc:RPC_0503 polyhydroxyalkanoate synthesis repressor PhaR; polyhydroxyalkanoate synthesis repressor PhaR 194943 4357910 RPE_0169 Rhodopseudomonas palustris BisA53 polyhydroxyalkanoate synthesis repressor PhaR YP_779110.1 194338 D 316055 CDS YP_779111.1 115522200 4357912 complement(195524..197212) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpc:RPC_0502 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 197212 4357912 RPE_0171 Rhodopseudomonas palustris BisA53 diguanylate cyclase/phosphodiesterase YP_779111.1 195524 R 316055 CDS YP_779112.1 115522201 4357913 197467..197751 1 NC_008435.1 KEGG: rpc:RPC_0501 hypothetical protein; hypothetical protein 197751 4357913 RPE_0172 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779112.1 197467 D 316055 CDS YP_779113.1 115522202 4357914 complement(197754..198335) 1 NC_008435.1 KEGG: rpc:RPC_0500 hypothetical protein; hypothetical protein 198335 4357914 RPE_0173 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779113.1 197754 R 316055 CDS YP_779114.1 115522203 4357915 complement(198548..198730) 1 NC_008435.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 198730 rpmF 4357915 rpmF Rhodopseudomonas palustris BisA53 50S ribosomal protein L32 YP_779114.1 198548 R 316055 CDS YP_779115.1 115522204 4357916 complement(198882..199601) 1 NC_008435.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 199601 mtgA 4357916 mtgA Rhodopseudomonas palustris BisA53 monofunctional biosynthetic peptidoglycan transglycosylase YP_779115.1 198882 R 316055 CDS YP_779116.1 115522205 4357917 199747..200673 1 NC_008435.1 PFAM: Polyprenyl synthetase; KEGG: rpc:RPC_0497 polyprenyl synthetase; polyprenyl synthetase 200673 4357917 RPE_0176 Rhodopseudomonas palustris BisA53 polyprenyl synthetase YP_779116.1 199747 D 316055 CDS YP_779117.1 115522206 4357918 200680..201360 1 NC_008435.1 PFAM: protein of unknown function DUF1345; KEGG: rpc:RPC_0496 protein of unknown function DUF1345; hypothetical protein 201360 4357918 RPE_0177 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779117.1 200680 D 316055 CDS YP_779118.1 115522207 4357919 201438..201716 1 NC_008435.1 KEGG: rpc:RPC_0495 hypothetical protein; hypothetical protein 201716 4357919 RPE_0178 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779118.1 201438 D 316055 CDS YP_779119.1 115522208 4357920 complement(201756..202196) 1 NC_008435.1 PFAM: BLUF domain protein; KEGG: rpc:RPC_0494 BLUF; BLUF domain-containing protein 202196 4357920 RPE_0179 Rhodopseudomonas palustris BisA53 BLUF domain-containing protein YP_779119.1 201756 R 316055 CDS YP_779120.1 115522209 4357921 complement(202216..203907) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpc:RPC_0493 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 203907 4357921 RPE_0180 Rhodopseudomonas palustris BisA53 diguanylate cyclase/phosphodiesterase YP_779120.1 202216 R 316055 CDS YP_779121.1 115522210 4357922 204154..205761 1 NC_008435.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: rpc:RPC_0492 Na+/H+ antiporter; Na+/H+ antiporter 205761 4357922 RPE_0181 Rhodopseudomonas palustris BisA53 Na+/H+ antiporter YP_779121.1 204154 D 316055 CDS YP_779122.1 115522211 4357923 206110..206388 1 NC_008435.1 PFAM: plasmid stabilization system; KEGG: rpc:RPC_4130 plasmid stabilization system; plasmid stabilization system protein 206388 4357923 RPE_0182 Rhodopseudomonas palustris BisA53 plasmid stabilization system protein YP_779122.1 206110 D 316055 CDS YP_779123.1 115522212 4357924 complement(206426..207706) 1 NC_008435.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 207706 ispG 4357924 ispG Rhodopseudomonas palustris BisA53 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_779123.1 206426 R 316055 CDS YP_779124.1 115522213 4357925 207921..208178 1 NC_008435.1 KEGG: nha:Nham_4317 hypothetical protein; hypothetical protein 208178 4357925 RPE_0184 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779124.1 207921 D 316055 CDS YP_779125.1 115522214 4357926 208301..208837 1 NC_008435.1 KEGG: pol:Bpro_5035 hypothetical protein; hypothetical protein 208837 4357926 RPE_0185 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779125.1 208301 D 316055 CDS YP_779126.1 115522215 4358487 complement(208842..209804) 1 NC_008435.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_0490 protein of unknown function DUF6, transmembrane; hypothetical protein 209804 4358487 RPE_0186 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779126.1 208842 R 316055 CDS YP_779127.1 115522216 4358488 complement(209833..210336) 1 NC_008435.1 PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0489 ferric uptake regulator, FUR family; ferric uptake regulator family protein 210336 4358488 RPE_0187 Rhodopseudomonas palustris BisA53 ferric uptake regulator family protein YP_779127.1 209833 R 316055 CDS YP_779128.1 115522217 4358489 210507..210989 1 NC_008435.1 PFAM: regulatory protein, MarR; KEGG: rpc:RPC_0488 transcriptional regulator, MarR family; MarR family transcriptional regulator 210989 4358489 RPE_0188 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_779128.1 210507 D 316055 CDS YP_779129.1 115522218 4358490 210982..212139 1 NC_008435.1 PFAM: biotin/lipoyl attachment domain-containing protein; secretion protein HlyD family protein; KEGG: rpc:RPC_0487 secretion protein HlyD; secretion protein HlyD family protein 212139 4358490 RPE_0189 Rhodopseudomonas palustris BisA53 secretion protein HlyD family protein YP_779129.1 210982 D 316055 CDS YP_779130.1 115522219 4358491 212715..214274 1 NC_008435.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_0486 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 214274 4358491 RPE_0190 Rhodopseudomonas palustris BisA53 EmrB/QacA family drug resistance transporter YP_779130.1 212715 D 316055 CDS YP_779131.1 115522220 4358492 complement(214374..215111) 1 NC_008435.1 KEGG: rpc:RPC_0485 twin-arginine translocation pathway signal; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: manganese and iron superoxide dismutase; superoxide dismutase 215111 4358492 RPE_0191 Rhodopseudomonas palustris BisA53 superoxide dismutase YP_779131.1 214374 R 316055 CDS YP_779132.1 115522221 4358493 complement(215295..217460) 1 NC_008435.1 KEGG: rpc:RPC_0484 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 217460 4358493 RPE_0192 Rhodopseudomonas palustris BisA53 polynucleotide phosphorylase/polyadenylase YP_779132.1 215295 R 316055 CDS YP_779133.1 115522222 4358494 complement(217823..218092) 1 NC_008435.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 218092 rpsO 4358494 rpsO Rhodopseudomonas palustris BisA53 30S ribosomal protein S15 YP_779133.1 217823 R 316055 CDS YP_779134.1 115522223 4358495 complement(218095..219207) 1 NC_008435.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 219207 truB 4358495 truB Rhodopseudomonas palustris BisA53 tRNA pseudouridine synthase B YP_779134.1 218095 R 316055 CDS YP_779135.1 115522224 4358496 complement(219204..219620) 1 NC_008435.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 219620 rbfA 4358496 rbfA Rhodopseudomonas palustris BisA53 ribosome-binding factor A YP_779135.1 219204 R 316055 CDS YP_779136.1 115522225 4358497 complement(219815..222496) 1 NC_008435.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 222496 infB 4358497 infB Rhodopseudomonas palustris BisA53 translation initiation factor IF-2 YP_779136.1 219815 R 316055 CDS YP_779137.1 115522226 4358498 complement(222489..223235) 1 NC_008435.1 PFAM: protein of unknown function DUF448; KEGG: rpc:RPC_0479 protein of unknown function DUF448; hypothetical protein 223235 4358498 RPE_0197 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779137.1 222489 R 316055 CDS YP_779138.1 115522227 4358499 complement(223251..224867) 1 NC_008435.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 224867 nusA 4358499 nusA Rhodopseudomonas palustris BisA53 transcription elongation factor NusA YP_779138.1 223251 R 316055 CDS YP_779139.1 115522228 4358500 complement(224871..225689) 1 NC_008435.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 225689 4358500 RPE_0199 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779139.1 224871 R 316055 CDS YP_779140.1 115522229 4358501 complement(225965..226717) 1 NC_008435.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 226717 trmB 4358501 trmB Rhodopseudomonas palustris BisA53 tRNA (guanine-N(7)-)-methyltransferase YP_779140.1 225965 R 316055 CDS YP_779141.1 115522230 4358502 complement(226835..227257) 1 NC_008435.1 PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_0473 transcriptional regulator, XRE family; XRE family transcriptional regulator 227257 4358502 RPE_0201 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_779141.1 226835 R 316055 CDS YP_779142.1 115522231 4358503 complement(227467..229080) 1 NC_008435.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 229080 lnt 4358503 lnt Rhodopseudomonas palustris BisA53 apolipoprotein N-acyltransferase YP_779142.1 227467 R 316055 CDS YP_779143.1 115522232 4358504 complement(229077..230189) 1 NC_008435.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: bja:bll0792 magnesium and cobalt efflux protein; hypothetical protein 230189 4358504 RPE_0203 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779143.1 229077 R 316055 CDS YP_779144.1 115522233 4359889 complement(230192..230710) 1 NC_008435.1 PFAM: protein of unknown function UPF0054; KEGG: rpc:RPC_0470 protein of unknown function UPF0054; hypothetical protein 230710 4359889 RPE_0204 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779144.1 230192 R 316055 CDS YP_779145.1 115522234 4359890 complement(230778..231833) 1 NC_008435.1 PFAM: PhoH family protein; KH, type 1, domain protein; KEGG: rpc:RPC_0469 PhoH-like protein; PhoH family protein 231833 4359890 RPE_0205 Rhodopseudomonas palustris BisA53 PhoH family protein YP_779145.1 230778 R 316055 CDS YP_779146.1 115522235 4359891 complement(231838..233235) 1 NC_008435.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 233235 4359891 RPE_0206 Rhodopseudomonas palustris BisA53 (dimethylallyl)adenosine tRNA methylthiotransferase YP_779146.1 231838 R 316055 CDS YP_779147.1 115522236 4359892 complement(233339..234013) 1 NC_008435.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_0467 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase 234013 4359892 RPE_0207 Rhodopseudomonas palustris BisA53 HAD family hydrolase YP_779147.1 233339 R 316055 CDS YP_779148.1 115522237 4359893 complement(234010..234447) 1 NC_008435.1 PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0466 ferric uptake regulator, FUR family; ferric uptake regulator family protein 234447 4359893 RPE_0208 Rhodopseudomonas palustris BisA53 ferric uptake regulator family protein YP_779148.1 234010 R 316055 CDS YP_779149.1 115522238 4359894 complement(234516..235001) 1 NC_008435.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_0465 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 235001 4359894 RPE_0209 Rhodopseudomonas palustris BisA53 ribosomal-protein-alanine acetyltransferase YP_779149.1 234516 R 316055 CDS YP_779150.1 115522239 4359895 complement(235039..235734) 1 NC_008435.1 PFAM: peptidase M22, glycoprotease; KEGG: rpc:RPC_0464 peptidase M22, glycoprotease; peptidase M22, glycoprotease 235734 4359895 RPE_0210 Rhodopseudomonas palustris BisA53 peptidase M22, glycoprotease YP_779150.1 235039 R 316055 CDS YP_779151.1 115522240 4359896 complement(235856..236422) 1 NC_008435.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: rpc:RPC_0463 nitrogen-fixing NifU-like; NifU domain-containing protein 236422 4359896 RPE_0211 Rhodopseudomonas palustris BisA53 NifU domain-containing protein YP_779151.1 235856 R 316055 CDS YP_779152.1 115522241 4359897 complement(236517..238148) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0461 ABC transporter related; ABC transporter-like protein 238148 4359897 RPE_0212 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779152.1 236517 R 316055 CDS YP_779153.1 115522242 4359898 complement(238293..238835) 1 NC_008435.1 PFAM: UspA domain protein; KEGG: rpc:RPC_0460 hypothetical protein; UspA domain-containing protein 238835 4359898 RPE_0213 Rhodopseudomonas palustris BisA53 UspA domain-containing protein YP_779153.1 238293 R 316055 CDS YP_779154.1 115522243 4359899 239214..239459 1 NC_008435.1 hypothetical protein 239459 4359899 RPE_0214 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779154.1 239214 D 316055 CDS YP_779155.1 115522244 4359900 239440..239865 1 NC_008435.1 hypothetical protein 239865 4359900 RPE_0215 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779155.1 239440 D 316055 CDS YP_779156.1 115522245 4359901 complement(239915..240964) 1 NC_008435.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 240964 4359901 RPE_0216 Rhodopseudomonas palustris BisA53 tryptophanyl-tRNA synthetase YP_779156.1 239915 R 316055 CDS YP_779157.1 115522246 4359902 complement(241034..242590) 1 NC_008435.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: rpc:RPC_0458 integral membrane protein MviN; integral membrane protein MviN 242590 4359902 RPE_0217 Rhodopseudomonas palustris BisA53 integral membrane protein MviN YP_779157.1 241034 R 316055 CDS YP_779158.1 115522247 4359903 242731..243732 1 NC_008435.1 PFAM: PfkB domain protein; KEGG: rpd:RPD_0251 PfkB; ribokinase-like domain-containing protein 243732 4359903 RPE_0218 Rhodopseudomonas palustris BisA53 ribokinase-like domain-containing protein YP_779158.1 242731 D 316055 CDS YP_779159.1 115522248 4359905 complement(245172..246374) 1 NC_008435.1 PFAM: beta-lactamase; KEGG: rpc:RPC_0456 beta-lactamase; beta-lactamase 246374 4359905 RPE_0220 Rhodopseudomonas palustris BisA53 beta-lactamase YP_779159.1 245172 R 316055 CDS YP_779160.1 115522249 4357980 246526..246858 1 NC_008435.1 KEGG: rpc:RPC_0455 hypothetical protein; hypothetical protein 246858 4357980 RPE_0221 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779160.1 246526 D 316055 CDS YP_779161.1 115522250 4357981 246994..248487 1 NC_008435.1 KEGG: rpd:RPD_0255 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase 248487 4357981 RPE_0222 Rhodopseudomonas palustris BisA53 succinate-semialdehyde dehydrogenase YP_779161.1 246994 D 316055 CDS YP_779162.1 115522251 4357982 complement(248539..249156) 1 NC_008435.1 PFAM: protein of unknown function DUF204; KEGG: pst:PSPTO3755 hypothetical protein; hypothetical protein 249156 4357982 RPE_0223 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779162.1 248539 R 316055 CDS YP_779163.1 115522252 4357983 249739..251943 1 NC_008435.1 KEGG: rpc:RPC_0453 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 251943 4357983 RPE_0224 Rhodopseudomonas palustris BisA53 1A family penicillin-binding protein YP_779163.1 249739 D 316055 CDS YP_779164.1 115522253 4357984 complement(252195..253031) 1 NC_008435.1 PFAM: protein of unknown function DUF45; KEGG: rpb:RPB_0064 protein of unknown function DUF45; hypothetical protein 253031 4357984 RPE_0225 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779164.1 252195 R 316055 CDS YP_779165.1 115522254 4357985 complement(253256..254584) 1 NC_008435.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: rpc:RPC_0356 polyhydroxyalkanoate depolymerase, intracellular; polyhydroxyalkanoate depolymerase 254584 4357985 RPE_0226 Rhodopseudomonas palustris BisA53 polyhydroxyalkanoate depolymerase YP_779165.1 253256 R 316055 CDS YP_779166.1 115522255 4357986 complement(254702..255511) 1 NC_008435.1 PFAM: ABC-2 type transporter; KEGG: rpc:RPC_0357 ABC-2; hypothetical protein 255511 4357986 RPE_0227 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779166.1 254702 R 316055 CDS YP_779167.1 115522256 4357987 complement(255517..256323) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0358 ABC transporter related; ABC transporter-like protein 256323 4357987 RPE_0228 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779167.1 255517 R 316055 CDS YP_779168.1 115522257 4357988 256464..257798 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_0359 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase 257798 4357988 RPE_0229 Rhodopseudomonas palustris BisA53 sensor signal transduction histidine kinase YP_779168.1 256464 D 316055 CDS YP_779169.1 115522258 4357989 257907..258461 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpa:RPA0571 two-component transcriptional regulator RegR, fis family; response regulator receiver protein 258461 4357989 RPE_0230 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_779169.1 257907 D 316055 CDS YP_779170.1 115522259 4357990 complement(258666..259199) 1 NC_008435.1 PFAM: protein of unknown function DUF1052; KEGG: rpc:RPC_0375 protein of unknown function DUF1052; hypothetical protein 259199 4357990 RPE_0231 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779170.1 258666 R 316055 CDS YP_779171.1 115522260 4357991 259299..260417 1 NC_008435.1 SMART: von Willebrand factor, type A; KEGG: rpa:RPA0569 hypothetical protein; von Willebrand factor, type A 260417 4357991 RPE_0232 Rhodopseudomonas palustris BisA53 von Willebrand factor, type A YP_779171.1 259299 D 316055 CDS YP_779172.1 115522261 4357992 260508..261236 1 NC_008435.1 PFAM: beta-lactamase domain protein; KEGG: rpb:RPB_0715 beta-lactamase-like; beta-lactamase domain-containing protein 261236 4357992 RPE_0233 Rhodopseudomonas palustris BisA53 beta-lactamase domain-containing protein YP_779172.1 260508 D 316055 CDS YP_779173.1 115522262 4357993 complement(261412..261828) 1 NC_008435.1 PFAM: protein of unknown function DUF1236; KEGG: rpc:RPC_0372 hypothetical protein; hypothetical protein 261828 4357993 RPE_0234 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779173.1 261412 R 316055 CDS YP_779174.1 115522263 4357994 complement(261919..264417) 1 NC_008435.1 KEGG: rpb:RPB_0712 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 264417 4357994 RPE_0235 Rhodopseudomonas palustris BisA53 PAS/PAC sensor hybrid histidine kinase YP_779174.1 261919 R 316055 CDS YP_779175.1 115522264 4357995 complement(264541..265704) 1 NC_008435.1 TIGRFAM: esterase, PHB depolymerase family; KEGG: rpc:RPC_0371 esterase, PHB depolymerase; PHB depolymerase family esterase 265704 4357995 RPE_0236 Rhodopseudomonas palustris BisA53 PHB depolymerase family esterase YP_779175.1 264541 R 316055 CDS YP_779176.1 115522265 4357996 complement(265857..267275) 1 NC_008435.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rpd:RPD_0139 chromate transporter; chromate transporter 267275 4357996 RPE_0237 Rhodopseudomonas palustris BisA53 chromate transporter YP_779176.1 265857 R 316055 CDS YP_779177.1 115522266 4357997 267920..268381 1 NC_008435.1 KEGG: rpc:RPC_0370 hypothetical protein; hypothetical protein 268381 4357997 RPE_0238 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779177.1 267920 D 316055 CDS YP_779178.1 115522267 4359019 complement(268388..269560) 1 NC_008435.1 KEGG: rpc:RPC_0368 hypothetical protein; hypothetical protein 269560 4359019 RPE_0239 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779178.1 268388 R 316055 CDS YP_779179.1 115522268 4359020 269651..271018 1 NC_008435.1 PFAM: MmgE/PrpD family protein; KEGG: rpd:RPD_0146 MmgE/PrpD; MmgE/PrpD family protein 271018 4359020 RPE_0240 Rhodopseudomonas palustris BisA53 MmgE/PrpD family protein YP_779179.1 269651 D 316055 CDS YP_779180.1 115522269 4359021 271122..271787 1 NC_008435.1 PFAM: PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: rpa:RPA0561 hypothetical protein; putative PAS/PAC sensor protein 271787 4359021 RPE_0241 Rhodopseudomonas palustris BisA53 putative PAS/PAC sensor protein YP_779180.1 271122 D 316055 CDS YP_779181.1 115522270 4359022 complement(271823..273193) 1 NC_008435.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_0365 peptidoglycan-binding domain 1; peptidoglycan binding domain-containing protein 273193 4359022 RPE_0242 Rhodopseudomonas palustris BisA53 peptidoglycan binding domain-containing protein YP_779181.1 271823 R 316055 CDS YP_779182.1 115522271 4359023 273321..274121 1 NC_008435.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: rpc:RPC_0364 UBA/ThiF-type NAD/FAD binding fold; UBA/THIF-type NAD/FAD binding protein 274121 4359023 RPE_0243 Rhodopseudomonas palustris BisA53 UBA/THIF-type NAD/FAD binding protein YP_779182.1 273321 D 316055 CDS YP_779183.1 115522272 4359024 complement(274384..275385) 1 NC_008435.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rpa:RPA0422 2-hydroxyacid dehydrogenase; glyoxylate reductase 275385 4359024 RPE_0244 Rhodopseudomonas palustris BisA53 glyoxylate reductase YP_779183.1 274384 R 316055 CDS YP_779184.1 115522273 4359025 275775..276302 1 NC_008435.1 PFAM: protein of unknown function DUF1058; KEGG: rpc:RPC_0353 protein of unknown function DUF1058; hypothetical protein 276302 4359025 RPE_0245 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779184.1 275775 D 316055 CDS YP_779185.1 115522274 4359026 complement(276491..279211) 1 NC_008435.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 279211 4359026 RPE_0246 Rhodopseudomonas palustris BisA53 DNA mismatch repair protein MutS YP_779185.1 276491 R 316055 CDS YP_779186.1 115522275 4359027 279635..281911 1 NC_008435.1 hypothetical protein 281911 4359027 RPE_0247 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779186.1 279635 D 316055 CDS YP_779187.1 115522276 4359028 282057..283265 1 NC_008435.1 catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase 283265 4359028 RPE_0248 Rhodopseudomonas palustris BisA53 beta-ketoadipyl CoA thiolase YP_779187.1 282057 D 316055 CDS YP_779188.1 115522277 4359029 complement(283332..284429) 1 NC_008435.1 PFAM: transposase, IS4 family protein; KEGG: rpc:RPC_2070 transposase, IS4; transposase, IS4 family protein 284429 4359029 RPE_0249 Rhodopseudomonas palustris BisA53 transposase, IS4 family protein YP_779188.1 283332 R 316055 CDS YP_779189.1 115522278 4359030 284714..285814 1 NC_008435.1 PFAM: transposase, IS4 family protein; KEGG: rpc:RPC_2070 transposase, IS4; transposase, IS4 family protein 285814 4359030 RPE_0250 Rhodopseudomonas palustris BisA53 transposase, IS4 family protein YP_779189.1 284714 D 316055 CDS YP_779190.1 115522279 4359031 286058..287566 1 NC_008435.1 PFAM: Carboxylesterase, type B; KEGG: xac:XAC1213 carboxylesterase, type B; carboxylesterase 287566 4359031 RPE_0251 Rhodopseudomonas palustris BisA53 carboxylesterase YP_779190.1 286058 D 316055 CDS YP_779191.1 115522280 4359032 complement(287832..288791) 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_0362 transcriptional regulator, LysR family; LysR family transcriptional regulator 288791 4359032 RPE_0252 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_779191.1 287832 R 316055 CDS YP_779192.1 115522281 4359033 289003..291195 1 NC_008435.1 KEGG: rpa:RPA0429 catalase/peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: heme peroxidase; catalase/peroxidase HPI 291195 4359033 RPE_0253 Rhodopseudomonas palustris BisA53 catalase/peroxidase HPI YP_779192.1 289003 D 316055 CDS YP_779193.1 115522282 4359034 291970..292575 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: nha:Nham_0039 glutathione S-transferase-like; glutathione S-transferase 292575 4359034 RPE_0254 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_779193.1 291970 D 316055 CDS YP_779194.1 115522283 4359035 complement(292757..293602) 1 NC_008435.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 293602 4359035 RPE_0255 Rhodopseudomonas palustris BisA53 enoyl-(acyl carrier protein) reductase YP_779194.1 292757 R 316055 CDS YP_779195.1 115522284 4358328 complement(293791..295017) 1 NC_008435.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 295017 4358328 RPE_0256 Rhodopseudomonas palustris BisA53 3-oxoacyl-ACP synthase YP_779195.1 293791 R 316055 CDS YP_779196.1 115522285 4358329 complement(295096..295626) 1 NC_008435.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 295626 4358329 RPE_0257 Rhodopseudomonas palustris BisA53 3-hydroxydecanoyl-ACP dehydratase YP_779196.1 295096 R 316055 CDS YP_779197.1 115522286 4358330 295959..296450 1 NC_008435.1 PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0350 ferric uptake regulator, FUR family; ferric uptake regulator family protein 296450 4358330 RPE_0258 Rhodopseudomonas palustris BisA53 ferric uptake regulator family protein YP_779197.1 295959 D 316055 CDS YP_779198.1 115522287 4358331 complement(296467..296976) 1 NC_008435.1 PFAM: OsmC family protein; KEGG: bja:blr0920 hypothetical protein; OsmC family protein 296976 4358331 RPE_0259 Rhodopseudomonas palustris BisA53 OsmC family protein YP_779198.1 296467 R 316055 CDS YP_779199.1 115522288 4358332 297238..300033 1 NC_008435.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 300033 4358332 RPE_0260 Rhodopseudomonas palustris BisA53 PII uridylyl-transferase YP_779199.1 297238 D 316055 CDS YP_779200.1 115522289 4358333 complement(300089..302824) 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpb:RPB_0035 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 302824 4358333 RPE_0261 Rhodopseudomonas palustris BisA53 multi-sensor hybrid histidine kinase YP_779200.1 300089 R 316055 CDS YP_779201.1 115522290 4358334 complement(302936..303364) 1 NC_008435.1 KEGG: rpb:RPB_0036 hypothetical protein; hypothetical protein 303364 4358334 RPE_0262 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779201.1 302936 R 316055 CDS YP_779202.1 115522291 4358335 303442..303804 1 NC_008435.1 PFAM: protein of unknown function DUF1304; KEGG: rpb:RPB_0037 protein of unknown function DUF1304; hypothetical protein 303804 4358335 RPE_0263 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779202.1 303442 D 316055 CDS YP_779203.1 115522292 4358336 303921..305144 1 NC_008435.1 KEGG: bja:bll0912 hypothetical protein; hypothetical protein 305144 4358336 RPE_0264 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779203.1 303921 D 316055 CDS YP_779204.1 115522293 4358337 complement(305330..305575) 1 NC_008435.1 KEGG: rpc:RPC_0343 hypothetical protein; hypothetical protein 305575 4358337 RPE_0265 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779204.1 305330 R 316055 CDS YP_779205.1 115522294 4358338 305745..307037 1 NC_008435.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 307037 proA 4358338 proA Rhodopseudomonas palustris BisA53 gamma-glutamyl phosphate reductase YP_779205.1 305745 D 316055 CDS YP_779206.1 115522295 4358339 307068..307718 1 NC_008435.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 307718 nadD 4358339 nadD Rhodopseudomonas palustris BisA53 nicotinic acid mononucleotide adenylyltransferase YP_779206.1 307068 D 316055 CDS YP_779207.1 115522296 4358340 307874..308236 1 NC_008435.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rpc:RPC_0163 iojap-related protein; iojap family protein 308236 4358340 RPE_0268 Rhodopseudomonas palustris BisA53 iojap family protein YP_779207.1 307874 D 316055 CDS YP_779208.1 115522297 4358341 308286..308768 1 NC_008435.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 308768 4358341 RPE_0269 Rhodopseudomonas palustris BisA53 rRNA large subunit methyltransferase YP_779208.1 308286 D 316055 CDS YP_779209.1 115522298 4358342 308765..310120 1 NC_008435.1 PFAM: peptidase M23B; KEGG: rpc:RPC_0165 peptidase M23B; peptidase M23B 310120 4358342 RPE_0270 Rhodopseudomonas palustris BisA53 peptidase M23B YP_779209.1 308765 D 316055 CDS YP_779210.1 115522299 4358343 310117..311490 1 NC_008435.1 KEGG: rpd:RPD_0566 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 311490 4358343 RPE_0271 Rhodopseudomonas palustris BisA53 carboxyl-terminal protease YP_779210.1 310117 D 316055 CDS YP_779211.1 115522300 4358344 311652..312863 1 NC_008435.1 PFAM: protein of unknown function DUF610, YibQ; KEGG: rpc:RPC_0167 protein of unknown function DUF610, YibQ; hypothetical protein 312863 4358344 RPE_0272 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779211.1 311652 D 316055 CDS YP_779212.1 115522301 4358345 312928..313458 1 NC_008435.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 313458 4358345 RPE_0273 Rhodopseudomonas palustris BisA53 dinucleoside polyphosphate hydrolase YP_779212.1 312928 D 316055 CDS YP_779213.1 115522302 4358765 complement(313455..314567) 1 NC_008435.1 KEGG: rpc:RPC_0169 hypothetical protein; hypothetical protein 314567 4358765 RPE_0274 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779213.1 313455 R 316055 CDS YP_779214.1 115522303 4358766 314740..315687 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: rpd:RPD_0562 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 315687 4358766 RPE_0275 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_779214.1 314740 D 316055 CDS YP_779215.1 115522304 4358767 315815..316345 1 NC_008435.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 316345 4358767 RPE_0276 Rhodopseudomonas palustris BisA53 dinucleoside polyphosphate hydrolase YP_779215.1 315815 D 316055 CDS YP_779216.1 115522305 4358768 complement(316349..317326) 1 NC_008435.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 317326 4358768 RPE_0277 Rhodopseudomonas palustris BisA53 delta-aminolevulinic acid dehydratase YP_779216.1 316349 R 316055 CDS YP_779217.1 115522306 4358769 complement(317642..318445) 1 NC_008435.1 SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: rpc:RPC_0172 transcriptional regulator, AraC family; AraC family transcriptional regulator 318445 4358769 RPE_0278 Rhodopseudomonas palustris BisA53 AraC family transcriptional regulator YP_779217.1 317642 R 316055 CDS YP_779218.1 115522307 4358770 complement(318549..318956) 1 NC_008435.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 318956 atpC 4358770 atpC Rhodopseudomonas palustris BisA53 F0F1 ATP synthase subunit epsilon YP_779218.1 318549 R 316055 CDS YP_779219.1 115522308 4358771 complement(319051..320481) 1 NC_008435.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 320481 4358771 RPE_0280 Rhodopseudomonas palustris BisA53 F0F1 ATP synthase subunit beta YP_779219.1 319051 R 316055 CDS YP_779220.1 115522309 4358772 complement(320554..321432) 1 NC_008435.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 321432 4358772 RPE_0281 Rhodopseudomonas palustris BisA53 F0F1 ATP synthase subunit gamma YP_779220.1 320554 R 316055 CDS YP_779221.1 115522310 4358773 complement(321577..323109) 1 NC_008435.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 323109 4358773 RPE_0282 Rhodopseudomonas palustris BisA53 F0F1 ATP synthase subunit alpha YP_779221.1 321577 R 316055 CDS YP_779222.1 115522311 4358774 complement(323109..323669) 1 NC_008435.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 323669 4358774 RPE_0283 Rhodopseudomonas palustris BisA53 F0F1 ATP synthase subunit delta YP_779222.1 323109 R 316055 CDS YP_779223.1 115522312 4358775 323850..324146 1 NC_008435.1 hypothetical protein 324146 4358775 RPE_0284 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779223.1 323850 D 316055 CDS YP_779224.1 115522313 4358776 324343..324822 1 NC_008435.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: rpc:RPC_0178 rare lipoprotein A; rare lipoprotein A 324822 4358776 RPE_0285 Rhodopseudomonas palustris BisA53 rare lipoprotein A YP_779224.1 324343 D 316055 CDS YP_779225.1 115522314 4358777 complement(324964..327162) 1 NC_008435.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 327162 4358777 RPE_0286 Rhodopseudomonas palustris BisA53 primosome assembly protein PriA YP_779225.1 324964 R 316055 CDS YP_779226.1 115522315 4358778 327268..328296 1 NC_008435.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 328296 xerC 4358778 xerC Rhodopseudomonas palustris BisA53 site-specific tyrosine recombinase XerC YP_779226.1 327268 D 316055 CDS YP_779227.1 115522316 4358779 328421..329014 1 NC_008435.1 KEGG: rpa:RPA0183 hypothetical protein; hypothetical protein 329014 4358779 RPE_0288 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779227.1 328421 D 316055 CDS YP_779228.1 115522317 4358780 complement(329047..329589) 1 NC_008435.1 KEGG: rpa:RPA0184 hypothetical protein; hypothetical protein 329589 4358780 RPE_0289 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779228.1 329047 R 316055 CDS YP_779229.1 115522318 4358781 complement(329732..331135) 1 NC_008435.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 331135 4358781 RPE_0290 Rhodopseudomonas palustris BisA53 dihydrolipoamide dehydrogenase YP_779229.1 329732 R 316055 CDS YP_779230.1 115522319 4359592 complement(331137..331412) 1 NC_008435.1 hypothetical protein 331412 4359592 RPE_0291 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779230.1 331137 R 316055 CDS YP_779231.1 115522320 4359593 complement(331458..332204) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpb:RPB_0275 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 332204 4359593 RPE_0292 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_779231.1 331458 R 316055 CDS YP_779232.1 115522321 4359594 complement(332247..332657) 1 NC_008435.1 KEGG: rpc:RPC_0187 hypothetical protein; hypothetical protein 332657 4359594 RPE_0293 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779232.1 332247 R 316055 CDS YP_779233.1 115522322 4359595 complement(332728..333039) 1 NC_008435.1 KEGG: rpd:RPD_0549 hypothetical protein; hypothetical protein 333039 4359595 RPE_0294 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779233.1 332728 R 316055 CDS YP_779234.1 115522323 4359596 complement(333036..333293) 1 NC_008435.1 KEGG: rpc:RPC_0185 hypothetical protein; hypothetical protein 333293 4359596 RPE_0295 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779234.1 333036 R 316055 CDS YP_779235.1 115522324 4359597 complement(333307..334614) 1 NC_008435.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 334614 4359597 RPE_0296 Rhodopseudomonas palustris BisA53 dihydrolipoamide succinyltransferase YP_779235.1 333307 R 316055 CDS YP_779236.1 115522325 4359598 complement(334720..337677) 1 NC_008435.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 337677 sucA 4359598 sucA Rhodopseudomonas palustris BisA53 2-oxoglutarate dehydrogenase E1 component YP_779236.1 334720 R 316055 CDS YP_779237.1 115522326 4359599 complement(337806..338690) 1 NC_008435.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rpb:RPB_0279 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 338690 4359599 RPE_0298 Rhodopseudomonas palustris BisA53 succinyl-CoA synthetase subunit alpha YP_779237.1 337806 R 316055 CDS YP_779238.1 115522327 4359600 complement(338691..339890) 1 NC_008435.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 339890 sucC 4359600 sucC Rhodopseudomonas palustris BisA53 succinyl-CoA synthetase subunit beta YP_779238.1 338691 R 316055 CDS YP_779239.1 115522328 4359601 complement(339947..340915) 1 NC_008435.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 340915 4359601 RPE_0300 Rhodopseudomonas palustris BisA53 malate dehydrogenase YP_779239.1 339947 R 316055 CDS YP_779240.1 115522329 4359602 complement(341052..342239) 1 NC_008435.1 PFAM: AFG1-family ATPase; KEGG: rpc:RPC_0195 AFG1-like ATPase; AFG1 family ATPase 342239 4359602 RPE_0301 Rhodopseudomonas palustris BisA53 AFG1 family ATPase YP_779240.1 341052 R 316055 CDS YP_779241.1 115522330 4359603 complement(342496..343032) 1 NC_008435.1 TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; KEGG: rpc:RPC_0196 2',5' RNA ligase; 2',5' RNA ligase 343032 4359603 RPE_0302 Rhodopseudomonas palustris BisA53 2',5' RNA ligase YP_779241.1 342496 R 316055 CDS YP_779242.1 115522331 4359604 complement(343166..343822) 1 NC_008435.1 PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rpc:RPC_0197 lipolytic enzyme, G-D-S-L; GDSL family lipase 343822 4359604 RPE_0303 Rhodopseudomonas palustris BisA53 GDSL family lipase YP_779242.1 343166 R 316055 CDS YP_779243.1 115522332 4359605 343872..344609 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0198 ABC transporter related; ABC transporter-like protein 344609 4359605 RPE_0304 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779243.1 343872 D 316055 CDS YP_779244.1 115522333 4359606 344722..347355 1 NC_008435.1 PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_0199 protein of unknown function DUF214; hypothetical protein 347355 4359606 RPE_0305 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779244.1 344722 D 316055 CDS YP_779245.1 115522334 4359607 347658..348473 1 NC_008435.1 PFAM: protein of unknown function UPF0005; KEGG: rpc:RPC_0200 protein of unknown function UPF0005; hypothetical protein 348473 4359607 RPE_0306 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779245.1 347658 D 316055 CDS YP_779246.1 115522335 4359608 348662..349201 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpd:RPD_0528 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 349201 4359608 RPE_0307 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_779246.1 348662 D 316055 CDS YP_779247.1 115522336 4359609 complement(349372..349746) 1 NC_008435.1 KEGG: nha:Nham_0406 hypothetical protein; hypothetical protein 349746 4359609 RPE_0308 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779247.1 349372 R 316055 CDS YP_779248.1 115522337 4357688 complement(350148..350975) 1 NC_008435.1 PFAM: protein of unknown function DUF1223; KEGG: rpc:RPC_0203 protein of unknown function DUF1223; hypothetical protein 350975 4357688 RPE_0309 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779248.1 350148 R 316055 CDS YP_779249.1 115522338 4357689 complement(351224..353941) 1 NC_008435.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 353941 4357689 RPE_0310 Rhodopseudomonas palustris BisA53 aconitate hydratase YP_779249.1 351224 R 316055 CDS YP_779250.1 115522339 4357690 354168..354770 1 NC_008435.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 354770 4357690 RPE_0311 Rhodopseudomonas palustris BisA53 cytochrome c biogenesis protein CcmA YP_779250.1 354168 D 316055 CDS YP_779251.1 115522340 4357691 355045..355713 1 NC_008435.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: rpc:RPC_0206 heme exporter protein CcmB; heme exporter protein CcmB 355713 4357691 RPE_0312 Rhodopseudomonas palustris BisA53 heme exporter protein CcmB YP_779251.1 355045 D 316055 CDS YP_779252.1 115522341 4357692 355809..356561 1 NC_008435.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: rpc:RPC_0207 heme exporter protein CcmC; heme exporter protein CcmC 356561 4357692 RPE_0313 Rhodopseudomonas palustris BisA53 heme exporter protein CcmC YP_779252.1 355809 D 316055 CDS YP_779253.1 115522342 4357693 356561..356740 1 NC_008435.1 PFAM: Heme exporter protein D (CcmD); KEGG: rpc:RPC_0208 heme exporter protein D (CcmD); heme exporter protein CcmD 356740 4357693 RPE_0314 Rhodopseudomonas palustris BisA53 heme exporter protein CcmD YP_779253.1 356561 D 316055 CDS YP_779254.1 115522343 4357694 356737..357333 1 NC_008435.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: rpc:RPC_0209 periplasmic protein thiol; periplasmic protein thiol 357333 4357694 RPE_0315 Rhodopseudomonas palustris BisA53 periplasmic protein thiol YP_779254.1 356737 D 316055 CDS YP_779255.1 115522344 4357695 357461..357826 1 NC_008435.1 KEGG: rpc:RPC_0210 hypothetical protein; hypothetical protein 357826 4357695 RPE_0316 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779255.1 357461 D 316055 CDS YP_779256.1 115522345 4357696 complement(358005..358628) 1 NC_008435.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 358628 4357696 RPE_0317 Rhodopseudomonas palustris BisA53 intracellular septation protein A YP_779256.1 358005 R 316055 CDS YP_779257.1 115522346 4357697 complement(358637..359587) 1 NC_008435.1 KEGG: rpc:RPC_0212 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 359587 4357697 RPE_0318 Rhodopseudomonas palustris BisA53 signal recognition particle-docking protein FtsY YP_779257.1 358637 R 316055 CDS YP_779258.1 115522347 4357698 359616..360452 1 NC_008435.1 PFAM: pseudouridine synthase; KEGG: rpd:RPD_0516 pseudouridine synthase; pseudouridine synthase 360452 4357698 RPE_0319 Rhodopseudomonas palustris BisA53 pseudouridine synthase YP_779258.1 359616 D 316055 CDS YP_779259.1 115522348 4357699 complement(360624..361889) 1 NC_008435.1 KEGG: rpc:RPC_0214 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein 361889 4357699 RPE_0320 Rhodopseudomonas palustris BisA53 MiaB-like tRNA modifying protein YP_779259.1 360624 R 316055 CDS YP_779260.1 115522349 4357700 complement(361892..362758) 1 NC_008435.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 362758 dapF 4357700 dapF Rhodopseudomonas palustris BisA53 diaminopimelate epimerase YP_779260.1 361892 R 316055 CDS YP_779261.1 115522350 4357701 362999..363823 1 NC_008435.1 PFAM: transcription activator, effector binding; KEGG: rpc:RPC_0216 transcription activator, effector binding; transcription activator, effector binding 363823 4357701 RPE_0322 Rhodopseudomonas palustris BisA53 transcription activator, effector binding YP_779261.1 362999 D 316055 CDS YP_779262.1 115522351 4357702 363829..364539 1 NC_008435.1 PFAM: protein of unknown function DUF541; KEGG: rpc:RPC_0217 protein of unknown function DUF541; hypothetical protein 364539 4357702 RPE_0323 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779262.1 363829 D 316055 CDS YP_779263.1 115522352 4357703 complement(364682..365740) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_0218 twin-arginine translocation pathway signal; hypothetical protein 365740 4357703 RPE_0324 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779263.1 364682 R 316055 CDS YP_779264.1 115522353 4357704 366097..366228 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_0219 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 366228 4357704 RPE_0325 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_779264.1 366097 D 316055 CDS YP_779265.1 115522354 4359994 366254..366451 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpd:RPD_2392 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 366451 4359994 RPE_0326 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_779265.1 366254 D 316055 CDS YP_779266.1 115522355 4359995 366722..368254 1 NC_008435.1 KEGG: rpa:RPA0245 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54, G- domain; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; signal recognition particle protein 368254 4359995 RPE_0327 Rhodopseudomonas palustris BisA53 signal recognition particle protein YP_779266.1 366722 D 316055 CDS YP_779267.1 115522356 4359996 368389..368721 1 NC_008435.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 368721 rpsP 4359996 rpsP Rhodopseudomonas palustris BisA53 30S ribosomal protein S16 YP_779267.1 368389 D 316055 CDS YP_779268.1 115522357 4359997 368820..369350 1 NC_008435.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 369350 rimM 4359997 rimM Rhodopseudomonas palustris BisA53 16S rRNA-processing protein RimM YP_779268.1 368820 D 316055 CDS YP_779269.1 115522358 4359998 369529..370272 1 NC_008435.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 370272 trmD 4359998 trmD Rhodopseudomonas palustris BisA53 tRNA (guanine-N(1)-)-methyltransferase YP_779269.1 369529 D 316055 CDS YP_779270.1 115522359 4359999 370387..370782 1 NC_008435.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 370782 rplS 4359999 rplS Rhodopseudomonas palustris BisA53 50S ribosomal protein L19 YP_779270.1 370387 D 316055 CDS YP_779271.1 115522360 4360000 371086..372498 1 NC_008435.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 372498 4360000 RPE_0332 Rhodopseudomonas palustris BisA53 isopropylmalate isomerase large subunit YP_779271.1 371086 D 316055 CDS YP_779272.1 115522361 4360001 complement(372574..374469) 1 NC_008435.1 KEGG: rpc:RPC_0064 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor, GTP-binding; adenylylsulfate kinase; elongation factor Tu, domain 2 protein; sulfate adenylyltransferase, large subunit 374469 4360001 RPE_0333 Rhodopseudomonas palustris BisA53 sulfate adenylyltransferase, large subunit YP_779272.1 372574 R 316055 CDS YP_779273.1 115522362 4360002 complement(374469..375455) 1 NC_008435.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 375455 4360002 RPE_0334 Rhodopseudomonas palustris BisA53 sulfate adenylyltransferase subunit 2 YP_779273.1 374469 R 316055 CDS YP_779274.1 115522363 4360003 complement(375452..376471) 1 NC_008435.1 KEGG: rpc:RPC_0062 hypothetical protein; hypothetical protein 376471 4360003 RPE_0335 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779274.1 375452 R 316055 CDS YP_779275.1 115522364 4360004 complement(377190..377504) 1 NC_008435.1 KEGG: rpb:RPB_0346 hypothetical protein; hypothetical protein 377504 4360004 RPE_0336 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779275.1 377190 R 316055 CDS YP_779276.1 115522365 4360005 complement(377587..377922) 1 NC_008435.1 KEGG: rpc:RPC_0228 hypothetical protein; hypothetical protein 377922 4360005 RPE_0337 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779276.1 377587 R 316055 CDS YP_779277.1 115522366 4360006 378037..378483 1 NC_008435.1 PFAM: protein of unknown function DUF1025; KEGG: rpa:RPA0236 hypothetical protein; hypothetical protein 378483 4360006 RPE_0338 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779277.1 378037 D 316055 CDS YP_779278.1 115522367 4360007 378567..379172 1 NC_008435.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 379172 leuD 4360007 leuD Rhodopseudomonas palustris BisA53 isopropylmalate isomerase small subunit YP_779278.1 378567 D 316055 CDS YP_779279.1 115522368 4360008 complement(379482..380360) 1 NC_008435.1 PFAM: HpcH/HpaI aldolase; KEGG: rpc:RPC_0233 citryl-CoA lyase; Citryl-CoA lyase 380360 4360008 RPE_0340 Rhodopseudomonas palustris BisA53 Citryl-CoA lyase YP_779279.1 379482 R 316055 CDS YP_779280.1 115522369 4360009 380478..381128 1 NC_008435.1 PFAM: carbonic anhydrase; KEGG: rpc:RPC_0234 carbonate dehydratase; carbonate dehydratase 381128 4360009 RPE_0341 Rhodopseudomonas palustris BisA53 carbonate dehydratase YP_779280.1 380478 D 316055 CDS YP_779281.1 115522370 4360010 complement(381188..381811) 1 NC_008435.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 381811 4360010 RPE_0342 Rhodopseudomonas palustris BisA53 phosphoglyceromutase YP_779281.1 381188 R 316055 CDS YP_779282.1 115522371 4360011 complement(381846..382667) 1 NC_008435.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 382667 4360011 RPE_0343 Rhodopseudomonas palustris BisA53 dihydrodipicolinate reductase YP_779282.1 381846 R 316055 CDS YP_779283.1 115522372 4358225 complement(382759..383061) 1 NC_008435.1 PFAM: protein of unknown function DUF1330; KEGG: rpc:RPC_0334 protein of unknown function DUF1330; hypothetical protein 383061 4358225 RPE_0344 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779283.1 382759 R 316055 CDS YP_779284.1 115522373 4358226 complement(383087..383794) 1 NC_008435.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 383794 4358226 RPE_0345 Rhodopseudomonas palustris BisA53 orotidine 5'-phosphate decarboxylase YP_779284.1 383087 R 316055 CDS YP_779285.1 115522374 4358227 complement(383801..384379) 1 NC_008435.1 PFAM: NADPH-dependent FMN reductase; KEGG: rpc:RPC_0332 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 384379 4358227 RPE_0346 Rhodopseudomonas palustris BisA53 NADPH-dependent FMN reductase YP_779285.1 383801 R 316055 CDS YP_779286.1 115522375 4358228 complement(384430..385032) 1 NC_008435.1 KEGG: rpc:RPC_0331 ribosomal RNA adenine methylase transferase; ribosomal RNA adenine methylase transferase 385032 4358228 RPE_0347 Rhodopseudomonas palustris BisA53 ribosomal RNA adenine methylase transferase YP_779286.1 384430 R 316055 CDS YP_779287.1 115522376 4358229 complement(385121..386305) 1 NC_008435.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 386305 4358229 RPE_0348 Rhodopseudomonas palustris BisA53 chaperone protein DnaJ YP_779287.1 385121 R 316055 CDS YP_779288.1 115522377 4358230 complement(386393..388294) 1 NC_008435.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 388294 dnaK 4358230 dnaK Rhodopseudomonas palustris BisA53 molecular chaperone DnaK YP_779288.1 386393 R 316055 CDS YP_779289.1 115522378 4358231 389049..389999 1 NC_008435.1 KEGG: rpc:RPC_0328 hypothetical protein; hypothetical protein 389999 4358231 RPE_0350 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779289.1 389049 D 316055 CDS YP_779290.1 115522379 4358232 complement(390080..390703) 1 NC_008435.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 390703 4358232 RPE_0351 Rhodopseudomonas palustris BisA53 heat shock protein GrpE YP_779290.1 390080 R 316055 CDS YP_779291.1 115522380 4358233 complement(390806..391930) 1 NC_008435.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 391930 hrcA 4358233 hrcA Rhodopseudomonas palustris BisA53 heat-inducible transcription repressor YP_779291.1 390806 R 316055 CDS YP_779292.1 115522381 4358234 392033..392764 1 NC_008435.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 392764 rph 4358234 rph Rhodopseudomonas palustris BisA53 ribonuclease PH YP_779292.1 392033 D 316055 CDS YP_779293.1 115522382 4358235 392799..393434 1 NC_008435.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 393434 4358235 RPE_0354 Rhodopseudomonas palustris BisA53 putative deoxyribonucleotide triphosphate pyrophosphatase YP_779293.1 392799 D 316055 CDS YP_779294.1 115522383 4358236 393421..394581 1 NC_008435.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 394581 4358236 RPE_0355 Rhodopseudomonas palustris BisA53 coproporphyrinogen III oxidase YP_779294.1 393421 D 316055 CDS YP_779295.1 115522384 4358237 complement(394727..395971) 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_0322 extracellular ligand-binding receptor; extracellular ligand-binding receptor 395971 4358237 RPE_0356 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_779295.1 394727 R 316055 CDS YP_779296.1 115522385 4358238 396079..397026 1 NC_008435.1 TIGRFAM: Protein of unknown function UPF0011; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpc:RPC_0321 protein of unknown function UPF0011; hypothetical protein 397026 4358238 RPE_0357 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779296.1 396079 D 316055 CDS YP_779297.1 115522386 4358239 397013..397405 1 NC_008435.1 PFAM: protein of unknown function UPF0102; KEGG: rpc:RPC_0320 protein of unknown function UPF0102; hypothetical protein 397405 4358239 RPE_0358 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779297.1 397013 D 316055 CDS YP_779298.1 115522387 4358240 397447..398388 1 NC_008435.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 398388 4358240 RPE_0359 Rhodopseudomonas palustris BisA53 glutathione synthetase YP_779298.1 397447 D 316055 CDS YP_779299.1 115522388 4358241 398491..400029 1 NC_008435.1 KEGG: rpc:RPC_0317 Mg chelatase-related protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase-like protein 400029 4358241 RPE_0360 Rhodopseudomonas palustris BisA53 Mg chelatase-like protein YP_779299.1 398491 D 316055 CDS YP_779300.1 115522389 4358120 400152..400622 1 NC_008435.1 KEGG: rpc:RPC_0316 hypothetical protein; hypothetical protein 400622 4358120 RPE_0361 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779300.1 400152 D 316055 CDS YP_779301.1 115522390 4358121 400780..403029 1 NC_008435.1 KEGG: rpc:RPC_0315 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 403029 4358121 RPE_0362 Rhodopseudomonas palustris BisA53 multi-sensor hybrid histidine kinase YP_779301.1 400780 D 316055 CDS YP_779302.1 115522391 4358122 403178..404128 1 NC_008435.1 KEGG: rpc:RPC_0314 hypothetical protein; hypothetical protein 404128 4358122 RPE_0363 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779302.1 403178 D 316055 CDS YP_779303.1 115522392 4358123 complement(404531..405487) 1 NC_008435.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 405487 4358123 RPE_0364 Rhodopseudomonas palustris BisA53 pantothenate kinase YP_779303.1 404531 R 316055 CDS YP_779304.1 115522393 4358124 complement(405596..405919) 1 NC_008435.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 405919 hisE 4358124 hisE Rhodopseudomonas palustris BisA53 phosphoribosyl-ATP pyrophosphatase YP_779304.1 405596 R 316055 CDS YP_779305.1 115522394 4358125 complement(405972..406739) 1 NC_008435.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 406739 4358125 RPE_0366 Rhodopseudomonas palustris BisA53 imidazole glycerol phosphate synthase subunit HisF YP_779305.1 405972 R 316055 CDS YP_779306.1 115522395 4358126 complement(406749..407486) 1 NC_008435.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 407486 4358126 RPE_0367 Rhodopseudomonas palustris BisA53 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_779306.1 406749 R 316055 CDS YP_779307.1 115522396 4358127 complement(407483..408133) 1 NC_008435.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 408133 hisH 4358127 hisH Rhodopseudomonas palustris BisA53 imidazole glycerol phosphate synthase subunit HisH YP_779307.1 407483 R 316055 CDS YP_779308.1 115522397 4358128 complement(408130..408627) 1 NC_008435.1 KEGG: rpc:RPC_0305 hypothetical protein; hypothetical protein 408627 4358128 RPE_0369 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779308.1 408130 R 316055 CDS YP_779309.1 115522398 4358129 complement(408654..409247) 1 NC_008435.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 409247 hisB 4358129 hisB Rhodopseudomonas palustris BisA53 imidazoleglycerol-phosphate dehydratase YP_779309.1 408654 R 316055 CDS YP_779310.1 115522399 4358130 409565..410137 1 NC_008435.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 410137 4358130 RPE_0371 Rhodopseudomonas palustris BisA53 ATP-dependent protease peptidase subunit YP_779310.1 409565 D 316055 CDS YP_779311.1 115522400 4358131 410301..411602 1 NC_008435.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 411602 hslU 4358131 hslU Rhodopseudomonas palustris BisA53 ATP-dependent protease ATP-binding subunit HslU YP_779311.1 410301 D 316055 CDS YP_779312.1 115522401 4358132 complement(411788..412390) 1 NC_008435.1 PFAM: Smr protein/MutS2; KEGG: rpc:RPC_0301 Smr protein/MutS2; Smr protein/MutS2 412390 4358132 RPE_0373 Rhodopseudomonas palustris BisA53 Smr protein/MutS2 YP_779312.1 411788 R 316055 CDS YP_779313.1 115522402 4358133 complement(412387..413745) 1 NC_008435.1 PFAM: MltA domain protein; 3D domain protein; KEGG: rpc:RPC_0300 MltA; MltA domain-containing protein 413745 4358133 RPE_0374 Rhodopseudomonas palustris BisA53 MltA domain-containing protein YP_779313.1 412387 R 316055 CDS YP_779314.1 115522403 4358134 complement(413900..414601) 1 NC_008435.1 PFAM: import inner membrane translocase, subunit Tim44; KEGG: rpc:RPC_0299 import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 414601 4358134 RPE_0375 Rhodopseudomonas palustris BisA53 import inner membrane translocase subunit Tim44 YP_779314.1 413900 R 316055 CDS YP_779315.1 115522404 4358135 415022..415507 1 NC_008435.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 415507 4358135 RPE_0376 Rhodopseudomonas palustris BisA53 preprotein translocase subunit SecB YP_779315.1 415022 D 316055 CDS YP_779316.1 115522405 4358136 complement(415560..416249) 1 NC_008435.1 KEGG: rpc:RPC_0297 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 416249 4358136 RPE_0377 Rhodopseudomonas palustris BisA53 DNA polymerase III subunit epsilon YP_779316.1 415560 R 316055 CDS YP_779317.1 115522406 4358137 complement(416274..416873) 1 NC_008435.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 416873 coaE 4358137 coaE Rhodopseudomonas palustris BisA53 dephospho-CoA kinase YP_779317.1 416274 R 316055 CDS YP_779318.1 115522407 4357723 complement(416894..417502) 1 NC_008435.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rpc:RPC_0295 maf protein; maf protein 417502 4357723 RPE_0379 Rhodopseudomonas palustris BisA53 maf protein YP_779318.1 416894 R 316055 CDS YP_779319.1 115522408 4357724 complement(417499..418338) 1 NC_008435.1 PFAM: protein of unknown function DUF299; KEGG: rpc:RPC_0294 protein of unknown function DUF299; hypothetical protein 418338 4357724 RPE_0380 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779319.1 417499 R 316055 CDS YP_779320.1 115522409 4357725 418803..419237 1 NC_008435.1 PFAM: conserved hypothetical protein 701; KEGG: rpb:RPB_0394 hypothetical protein; hypothetical protein 419237 4357725 RPE_0381 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779320.1 418803 D 316055 CDS YP_779321.1 115522410 4357726 419539..420804 1 NC_008435.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 420804 rho 4357726 rho Rhodopseudomonas palustris BisA53 transcription termination factor Rho YP_779321.1 419539 D 316055 CDS YP_779322.1 115522411 4357727 421043..422491 1 NC_008435.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 422491 trmE 4357727 trmE Rhodopseudomonas palustris BisA53 tRNA modification GTPase TrmE YP_779322.1 421043 D 316055 CDS YP_779323.1 115522412 4357728 422647..424515 1 NC_008435.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 424515 4357728 RPE_0384 Rhodopseudomonas palustris BisA53 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_779323.1 422647 D 316055 CDS YP_779324.1 115522413 4357729 424979..425674 1 NC_008435.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 425674 gidB 4357729 gidB Rhodopseudomonas palustris BisA53 16S rRNA methyltransferase GidB YP_779324.1 424979 D 316055 CDS YP_779325.1 115522414 4357730 425671..426522 1 NC_008435.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rpc:RPC_0288 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 426522 4357730 RPE_0386 Rhodopseudomonas palustris BisA53 cobyrinic acid a,c-diamide synthase YP_779325.1 425671 D 316055 CDS YP_779326.1 115522415 4357731 426771..427673 1 NC_008435.1 TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: rpc:RPC_0287 ParB-like partition proteins; parB-like partition proteins 427673 4357731 RPE_0387 Rhodopseudomonas palustris BisA53 parB-like partition proteins YP_779326.1 426771 D 316055 CDS YP_779327.1 115522416 4357732 complement(427956..428984) 1 NC_008435.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 428984 holA 4357732 holA Rhodopseudomonas palustris BisA53 DNA polymerase III subunit delta YP_779327.1 427956 R 316055 CDS YP_779328.1 115522417 4357733 complement(428986..429537) 1 NC_008435.1 KEGG: rpc:RPC_0285 hypothetical protein; hypothetical protein 429537 4357733 RPE_0389 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779328.1 428986 R 316055 CDS YP_779329.1 115522418 4357734 complement(429524..432190) 1 NC_008435.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 432190 leuS 4357734 leuS Rhodopseudomonas palustris BisA53 leucyl-tRNA synthetase YP_779329.1 429524 R 316055 CDS YP_779330.1 115522419 4357735 complement(432387..434066) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_0283 diguanylate cyclase (GGDEF domain); diguanylate cyclase 434066 4357735 RPE_0391 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_779330.1 432387 R 316055 CDS YP_779331.1 115522420 4357736 434273..434938 1 NC_008435.1 TIGRFAM: Protein of unknown function UPF0001; PFAM: alanine racemase domain protein; KEGG: rpd:RPD_0438 protein of unknown function UPF0001; hypothetical protein 434938 4357736 RPE_0392 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779331.1 434273 D 316055 CDS YP_779332.1 115522421 4357737 complement(434964..435572) 1 NC_008435.1 KEGG: rpc:RPC_0281 hypothetical protein; hypothetical protein 435572 4357737 RPE_0393 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779332.1 434964 R 316055 CDS YP_779333.1 115522422 4357738 435709..436392 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_0280 two component transcriptional regulator, winged helix family; two component transcriptional regulator 436392 4357738 RPE_0394 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_779333.1 435709 D 316055 CDS YP_779334.1 115522423 4357739 436459..436905 1 NC_008435.1 PFAM: cyclic nucleotide-binding; KEGG: rpc:RPC_0279 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein 436905 4357739 RPE_0395 Rhodopseudomonas palustris BisA53 cyclic nucleotide-binding protein YP_779334.1 436459 D 316055 CDS YP_779335.1 115522424 4359158 complement(437093..437905) 1 NC_008435.1 TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpc:RPC_0278 exodeoxyribonuclease III (xth); exodeoxyribonuclease III Xth 437905 4359158 RPE_0396 Rhodopseudomonas palustris BisA53 exodeoxyribonuclease III Xth YP_779335.1 437093 R 316055 CDS YP_779336.1 115522425 4359159 complement(438096..438944) 1 NC_008435.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: rpc:RPC_0277 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 438944 4359159 RPE_0397 Rhodopseudomonas palustris BisA53 outer membrane lipoprotein carrier protein LolA YP_779336.1 438096 R 316055 CDS YP_779337.1 115522426 4359160 complement(439094..441556) 1 NC_008435.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rpc:RPC_0276 cell divisionFtsK/SpoIIIE; cell division protein FtsK 441556 4359160 RPE_0398 Rhodopseudomonas palustris BisA53 cell division protein FtsK YP_779337.1 439094 R 316055 CDS YP_779338.1 115522427 4359161 complement(441553..442791) 1 NC_008435.1 PFAM: aminotransferase, class I and II; KEGG: rpc:RPC_0275 aminotransferase, class I and II; class I and II aminotransferase 442791 4359161 RPE_0399 Rhodopseudomonas palustris BisA53 class I and II aminotransferase YP_779338.1 441553 R 316055 CDS YP_779339.1 115522428 4359162 complement(442950..443294) 1 NC_008435.1 PFAM: protein of unknown function DUF86; KEGG: rpc:RPC_0274 protein of unknown function DUF86; hypothetical protein 443294 4359162 RPE_0400 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779339.1 442950 R 316055 CDS YP_779340.1 115522429 4359163 complement(443284..443652) 1 NC_008435.1 PFAM: DNA polymerase, beta domain protein region; KEGG: rpc:RPC_0273 DNA polymerase, beta-like region; DNA polymerase subunit beta 443652 4359163 RPE_0401 Rhodopseudomonas palustris BisA53 DNA polymerase subunit beta YP_779340.1 443284 R 316055 CDS YP_779341.1 115522430 4359164 complement(443766..445208) 1 NC_008435.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rpa:RPA0275 putative ammonium transporter AmtB; ammonium transporter 445208 4359164 RPE_0402 Rhodopseudomonas palustris BisA53 ammonium transporter YP_779341.1 443766 R 316055 CDS YP_779342.1 115522431 4359165 complement(445246..445584) 1 NC_008435.1 PFAM: nitrogen regulatory protein P-II; KEGG: rpd:RPD_0449 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 445584 4359165 RPE_0403 Rhodopseudomonas palustris BisA53 nitrogen regulatory protein P-II YP_779342.1 445246 R 316055 CDS YP_779343.1 115522432 4359166 complement(445988..447292) 1 NC_008435.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rpc:RPC_0270 ammonium transporter; ammonium transporter 447292 4359166 RPE_0404 Rhodopseudomonas palustris BisA53 ammonium transporter YP_779343.1 445988 R 316055 CDS YP_779344.1 115522433 4359167 complement(447361..447699) 1 NC_008435.1 PFAM: nitrogen regulatory protein P-II; KEGG: rpd:RPD_0451 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 447699 4359167 RPE_0405 Rhodopseudomonas palustris BisA53 nitrogen regulatory protein P-II YP_779344.1 447361 R 316055 CDS YP_779345.1 115522434 4359168 complement(447872..448753) 1 NC_008435.1 KEGG: rpc:RPC_0268 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 448753 4359168 RPE_0406 Rhodopseudomonas palustris BisA53 acyl-CoA thioesterase II YP_779345.1 447872 R 316055 CDS YP_779346.1 115522435 4359169 448906..450126 1 NC_008435.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: rpc:RPC_0267 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-6-methoxyphenyl hydroxylase 450126 4359169 RPE_0407 Rhodopseudomonas palustris BisA53 2-octaprenyl-6-methoxyphenyl hydroxylase YP_779346.1 448906 D 316055 CDS YP_779347.1 115522436 4359170 complement(450190..450390) 1 NC_008435.1 PFAM: protein of unknown function DUF343; KEGG: rpc:RPC_0266 protein of unknown function DUF343; hypothetical protein 450390 4359170 RPE_0408 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779347.1 450190 R 316055 CDS YP_779348.1 115522437 4359171 complement(450479..451153) 1 NC_008435.1 PFAM: peptidase S16, lon domain protein; KEGG: nha:Nham_0082 peptidase S16, lon-like; peptidase S16, lon domain-containing protein 451153 4359171 RPE_0409 Rhodopseudomonas palustris BisA53 peptidase S16, lon domain-containing protein YP_779348.1 450479 R 316055 CDS YP_779349.1 115522438 4359172 complement(451174..452094) 1 NC_008435.1 PFAM: Thioredoxin domain; KEGG: rpa:RPA0267 possible thioredoxin; thioredoxin domain-containing protein 452094 4359172 RPE_0410 Rhodopseudomonas palustris BisA53 thioredoxin domain-containing protein YP_779349.1 451174 R 316055 CDS YP_779350.1 115522439 4359174 complement(452748..453521) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_0263 histidine kinase, HAMP region; histidine kinase 453521 4359174 RPE_0411 Rhodopseudomonas palustris BisA53 histidine kinase YP_779350.1 452748 R 316055 CDS YP_779351.1 115522440 4360252 454055..455032 1 NC_008435.1 KEGG: rpc:RPC_0262 putative photosynthesis gene regulator, AppA/PpaA family; AppA/PpaA family photosynthesis gene regulator 455032 4360252 RPE_0412 Rhodopseudomonas palustris BisA53 AppA/PpaA family photosynthesis gene regulator YP_779351.1 454055 D 316055 CDS YP_779352.1 115522441 4360253 455406..456497 1 NC_008435.1 KEGG: rpc:RPC_0261 hypothetical protein; hypothetical protein 456497 4360253 RPE_0413 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779352.1 455406 D 316055 CDS YP_779353.1 115522442 4360254 complement(456688..457941) 1 NC_008435.1 KEGG: rpc:RPC_0260 molecular chaperone, HSP70 class; molecular chaperone, HSP70 class 457941 4360254 RPE_0414 Rhodopseudomonas palustris BisA53 molecular chaperone, HSP70 class YP_779353.1 456688 R 316055 CDS YP_779354.1 115522443 4360255 458182..460536 1 NC_008435.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: rpc:RPC_0259 RNA binding S1; RNA-binding S1 domain-containing protein 460536 4360255 RPE_0415 Rhodopseudomonas palustris BisA53 RNA-binding S1 domain-containing protein YP_779354.1 458182 D 316055 CDS YP_779355.1 115522444 4360256 460617..461249 1 NC_008435.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpb:RPB_1973 epoxide hydrolase; HAD family phosphatase 461249 4360256 RPE_0416 Rhodopseudomonas palustris BisA53 HAD family phosphatase YP_779355.1 460617 D 316055 CDS YP_779356.1 115522445 4360257 461484..462464 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_0258 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 462464 4360257 RPE_0417 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_779356.1 461484 D 316055 CDS YP_779357.1 115522446 4360258 462591..463742 1 NC_008435.1 KEGG: rpc:RPC_0257 hypothetical protein; hypothetical protein 463742 4360258 RPE_0418 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779357.1 462591 D 316055 CDS YP_779358.1 115522447 4360259 463739..464833 1 NC_008435.1 KEGG: rpc:RPC_0256 hypothetical protein; hypothetical protein 464833 4360259 RPE_0419 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779358.1 463739 D 316055 CDS YP_779359.1 115522448 4360260 464826..466187 1 NC_008435.1 KEGG: rpc:RPC_0255 hypothetical protein; hypothetical protein 466187 4360260 RPE_0420 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779359.1 464826 D 316055 CDS YP_779360.1 115522449 4360261 466266..466619 1 NC_008435.1 KEGG: rpb:RPB_4696 hypothetical protein; hypothetical protein 466619 4360261 RPE_0421 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779360.1 466266 D 316055 CDS YP_779361.1 115522450 4360262 complement(466788..468086) 1 NC_008435.1 PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: rpc:RPC_0252 ribulose-bisphosphate carboxylase; RuBisCO-like protein Rlp2 468086 4360262 RPE_0422 Rhodopseudomonas palustris BisA53 RuBisCO-like protein Rlp2 YP_779361.1 466788 R 316055 CDS YP_779362.1 115522451 4360263 complement(468091..468531) 1 NC_008435.1 PFAM: protein of unknown function UPF0047; KEGG: rpc:RPC_0251 protein of unknown function UPF0047; hypothetical protein 468531 4360263 RPE_0423 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779362.1 468091 R 316055 CDS YP_779363.1 115522452 4360264 468715..469110 1 NC_008435.1 KEGG: rpc:RPC_4551 SecC-like protein; SecC-like protein 469110 4360264 RPE_0424 Rhodopseudomonas palustris BisA53 SecC-like protein YP_779363.1 468715 D 316055 CDS YP_779364.1 115522453 4360265 469216..470838 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_0949 ABC transporter related; ABC transporter-like protein 470838 4360265 RPE_0425 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779364.1 469216 D 316055 CDS YP_779365.1 115522454 4360266 470961..471575 1 NC_008435.1 PFAM: 3'-5' exonuclease; KEGG: rpc:RPC_0419 3'-5' exonuclease; 3'-5' exonuclease 471575 4360266 RPE_0426 Rhodopseudomonas palustris BisA53 3'-5' exonuclease YP_779365.1 470961 D 316055 CDS YP_779366.1 115522455 4360267 471793..472491 1 NC_008435.1 KEGG: rpc:RPC_0418 hypothetical protein; hypothetical protein 472491 4360267 RPE_0427 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779366.1 471793 D 316055 CDS YP_779367.1 115522456 4360268 472481..473170 1 NC_008435.1 PFAM: OstA family protein; KEGG: rpc:RPC_0417 OstA-like protein; OstA-like protein 473170 4360268 RPE_0428 Rhodopseudomonas palustris BisA53 OstA-like protein YP_779367.1 472481 D 316055 CDS YP_779368.1 115522457 4357671 473357..474301 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_0177 ABC transporter related; ABC transporter-like protein 474301 4357671 RPE_0429 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779368.1 473357 D 316055 CDS YP_779369.1 115522458 4357672 474408..476051 1 NC_008435.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 476051 4357672 RPE_0430 Rhodopseudomonas palustris BisA53 RNA polymerase factor sigma-54 YP_779369.1 474408 D 316055 CDS YP_779370.1 115522459 4357673 476108..476698 1 NC_008435.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rpc:RPC_0414 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 476698 4357673 RPE_0431 Rhodopseudomonas palustris BisA53 sigma 54 modulation protein/ribosomal protein S30EA YP_779370.1 476108 D 316055 CDS YP_779371.1 115522460 4357674 476937..477398 1 NC_008435.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: rpc:RPC_0413 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 477398 4357674 RPE_0432 Rhodopseudomonas palustris BisA53 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_779371.1 476937 D 316055 CDS YP_779372.1 115522461 4357675 complement(477522..479057) 1 NC_008435.1 KEGG: rpc:RPC_2948 hypothetical protein; hypothetical protein 479057 4357675 RPE_0433 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779372.1 477522 R 316055 CDS YP_779373.1 115522462 4357676 complement(479513..479776) 1 NC_008435.1 PFAM: protein of unknown function DUF1150; KEGG: rpc:RPC_0410 protein of unknown function DUF1150; hypothetical protein 479776 4357676 RPE_0434 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779373.1 479513 R 316055 CDS YP_779374.1 115522463 4357677 complement(479829..480254) 1 NC_008435.1 PFAM: heat shock protein Hsp20; KEGG: rpc:RPC_0409 heat shock protein HSP20; heat shock protein Hsp20 480254 4357677 RPE_0435 Rhodopseudomonas palustris BisA53 heat shock protein Hsp20 YP_779374.1 479829 R 316055 CDS YP_779375.1 115522464 4357678 complement(480412..481497) 1 NC_008435.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 481497 ugpC 4357678 ugpC Rhodopseudomonas palustris BisA53 glycerol-3-phosphate transporter ATP-binding subunit YP_779375.1 480412 R 316055 CDS YP_779376.1 115522465 4357679 complement(481625..482473) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_0407 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 482473 4357679 RPE_0437 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport system inner membrane protein YP_779376.1 481625 R 316055 CDS YP_779377.1 115522466 4357680 complement(482715..483596) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_0406 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 483596 4357680 RPE_0438 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport systems inner membrane component YP_779377.1 482715 R 316055 CDS YP_779378.1 115522467 4357681 complement(483598..483993) 1 NC_008435.1 PFAM: protein of unknown function DUF559; KEGG: rpc:RPC_0405 protein of unknown function DUF559; hypothetical protein 483993 4357681 RPE_0439 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779378.1 483598 R 316055 CDS YP_779379.1 115522468 4357682 complement(484137..485453) 1 NC_008435.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_0404 extracellular solute-binding protein, family 1; extracellular solute-binding protein 485453 4357682 RPE_0440 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_779379.1 484137 R 316055 CDS YP_779380.1 115522469 4357683 complement(485625..486830) 1 NC_008435.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rpc:RPC_0403 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 486830 4357683 RPE_0441 Rhodopseudomonas palustris BisA53 L-carnitine dehydratase/bile acid-inducible protein F YP_779380.1 485625 R 316055 CDS YP_779381.1 115522470 4357684 complement(486837..487112) 1 NC_008435.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpc:RPC_0402 excinuclease ABC, C subunit-like; excinuclease ABC subunit C 487112 4357684 RPE_0442 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_779381.1 486837 R 316055 CDS YP_779382.1 115522471 4357686 complement(487543..487953) 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_0401 hypothetical protein; hypothetical protein 487953 4357686 RPE_0443 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779382.1 487543 R 316055 CDS YP_779383.1 115522472 4357687 488096..489433 1 NC_008435.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 489433 4357687 RPE_0444 Rhodopseudomonas palustris BisA53 3-phosphoshikimate 1-carboxyvinyltransferase YP_779383.1 488096 D 316055 CDS YP_779384.1 115522473 4358574 complement(489438..490109) 1 NC_008435.1 PFAM: protein of unknown function DUF374; KEGG: rpc:RPC_0399 protein of unknown function DUF374; hypothetical protein 490109 4358574 RPE_0445 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779384.1 489438 R 316055 CDS YP_779385.1 115522474 4358575 490300..490935 1 NC_008435.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 490935 cmk 4358575 cmk Rhodopseudomonas palustris BisA53 cytidylate kinase YP_779385.1 490300 D 316055 CDS YP_779386.1 115522475 4358576 490971..491276 1 NC_008435.1 hypothetical protein 491276 4358576 RPE_0447 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779386.1 490971 D 316055 CDS YP_779387.1 115522476 4358577 491257..491754 1 NC_008435.1 KEGG: rpc:RPC_0445 hypothetical protein; hypothetical protein 491754 4358577 RPE_0448 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779387.1 491257 D 316055 CDS YP_779388.1 115522477 4358578 492122..493819 1 NC_008435.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 493819 rpsA 4358578 rpsA Rhodopseudomonas palustris BisA53 30S ribosomal protein S1 YP_779388.1 492122 D 316055 CDS YP_779389.1 115522478 4358579 494025..494999 1 NC_008435.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: rpc:RPC_0396 signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 36K type 494999 4358579 RPE_0450 Rhodopseudomonas palustris BisA53 signal peptide peptidase SppA, 36K type YP_779389.1 494025 D 316055 CDS YP_779390.1 115522479 4358580 495159..495467 1 NC_008435.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 495467 ihfB 4358580 ihfB Rhodopseudomonas palustris BisA53 integration host factor subunit beta YP_779390.1 495159 D 316055 CDS YP_779391.1 115522480 4358581 495499..495900 1 NC_008435.1 KEGG: rpc:RPC_0394 hypothetical protein; hypothetical protein 495900 4358581 RPE_0452 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779391.1 495499 D 316055 CDS YP_779392.1 115522481 4358582 495951..496607 1 NC_008435.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 496607 4358582 RPE_0453 Rhodopseudomonas palustris BisA53 N-(5'-phosphoribosyl)anthranilate isomerase YP_779392.1 495951 D 316055 CDS YP_779393.1 115522482 4358583 496607..497821 1 NC_008435.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 497821 4358583 RPE_0454 Rhodopseudomonas palustris BisA53 tryptophan synthase subunit beta YP_779393.1 496607 D 316055 CDS YP_779394.1 115522483 4358584 497821..498657 1 NC_008435.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 498657 trpA 4358584 trpA Rhodopseudomonas palustris BisA53 tryptophan synthase subunit alpha YP_779394.1 497821 D 316055 CDS YP_779395.1 115522484 4358585 498828..499805 1 NC_008435.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 499805 4358585 RPE_0456 Rhodopseudomonas palustris BisA53 acetyl-CoA carboxylase subunit beta YP_779395.1 498828 D 316055 CDS YP_779396.1 115522485 4358586 499802..501145 1 NC_008435.1 KEGG: rpc:RPC_0389 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 501145 4358586 RPE_0457 Rhodopseudomonas palustris BisA53 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_779396.1 499802 D 316055 CDS YP_779397.1 115522486 4358587 501174..501920 1 NC_008435.1 PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: vpa:VP1368 hypothetical protein; type 11 methyltransferase 501920 4358587 RPE_0458 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_779397.1 501174 D 316055 CDS YP_779398.1 115522487 4358588 complement(501950..502270) 1 NC_008435.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rpa:RPA0073 thioredoxin; thioredoxin 502270 4358588 RPE_0459 Rhodopseudomonas palustris BisA53 thioredoxin YP_779398.1 501950 R 316055 CDS YP_779399.1 115522488 4358589 complement(502366..505863) 1 NC_008435.1 PFAM: UvrD/REP helicase; KEGG: rpc:RPC_0387 UvrD/REP helicase; UvrD/REP helicase 505863 4358589 RPE_0460 Rhodopseudomonas palustris BisA53 UvrD/REP helicase YP_779399.1 502366 R 316055 CDS YP_779400.1 115522489 4358590 complement(505860..509009) 1 NC_008435.1 KEGG: rpc:RPC_0386 hypothetical protein; hypothetical protein 509009 4358590 RPE_0461 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779400.1 505860 R 316055 CDS YP_779401.1 115522490 4358642 complement(509309..510031) 1 NC_008435.1 PFAM: Nucleotidyl transferase; KEGG: rpd:RPD_0204 nucleotidyl transferase; nucleotidyl transferase 510031 4358642 RPE_0462 Rhodopseudomonas palustris BisA53 nucleotidyl transferase YP_779401.1 509309 R 316055 CDS YP_779402.1 115522491 4358643 complement(510168..510491) 1 NC_008435.1 KEGG: rpb:RPB_0626 hypothetical protein; hypothetical protein 510491 4358643 RPE_0463 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779402.1 510168 R 316055 CDS YP_779403.1 115522492 4358644 complement(510565..512088) 1 NC_008435.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; KEGG: rpc:RPC_0383 protein of unknown function UPF0079; hypothetical protein 512088 4358644 RPE_0464 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779403.1 510565 R 316055 CDS YP_779404.1 115522493 4358645 complement(512085..514616) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: rpc:RPC_0382 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 514616 4358645 RPE_0465 Rhodopseudomonas palustris BisA53 PAS/PAC sensor signal transduction histidine kinase YP_779404.1 512085 R 316055 CDS YP_779405.1 115522494 4358646 complement(514936..515388) 1 NC_008435.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 515388 dut 4358646 dut Rhodopseudomonas palustris BisA53 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_779405.1 514936 R 316055 CDS YP_779406.1 115522495 4358647 complement(515385..516821) 1 NC_008435.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; in the alphaproteobacteria, this protein contains an N-terminal SbtC-like domain; bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 516821 4358647 RPE_0467 Rhodopseudomonas palustris BisA53 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_779406.1 515385 R 316055 CDS YP_779407.1 115522496 4358648 517111..517908 1 NC_008435.1 KEGG: ttj:TTHA1533 hypothetical protein; hypothetical protein 517908 4358648 RPE_0468 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779407.1 517111 D 316055 CDS YP_779408.1 115522497 4358649 complement(518129..519706) 1 NC_008435.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: rpc:RPC_0379 2-polyprenylphenol 6-hydroxylase; 2-polyprenylphenol 6-hydroxylase 519706 4358649 RPE_0469 Rhodopseudomonas palustris BisA53 2-polyprenylphenol 6-hydroxylase YP_779408.1 518129 R 316055 CDS YP_779409.1 115522498 4358650 complement(519703..520578) 1 NC_008435.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 520578 ubiE 4358650 ubiE Rhodopseudomonas palustris BisA53 ubiquinone/menaquinone biosynthesis methyltransferase YP_779409.1 519703 R 316055 CDS YP_779410.1 115522499 4358651 520601..521482 1 NC_008435.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 521482 4358651 RPE_0471 Rhodopseudomonas palustris BisA53 formamidopyrimidine-DNA glycosylase YP_779410.1 520601 D 316055 CDS YP_779411.1 115522500 4358652 complement(521522..521740) 1 NC_008435.1 KEGG: gvi:gsr4342 virulence-associated protein VapB homolog; virulence-associated protein VapB-like protein 521740 4358652 RPE_0472 Rhodopseudomonas palustris BisA53 virulence-associated protein VapB-like protein YP_779411.1 521522 R 316055 CDS YP_779412.1 115522501 4358653 521889..523403 1 NC_008435.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 523403 4358653 RPE_0473 Rhodopseudomonas palustris BisA53 malonyl-CoA synthase YP_779412.1 521889 D 316055 CDS YP_779413.1 115522502 4358654 523652..524458 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_0246 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 524458 4358654 RPE_0474 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_779413.1 523652 D 316055 CDS YP_779414.1 115522503 4358655 524707..525624 1 NC_008435.1 consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate; anaerobic benzoate catabolism transcriptional regulator 525624 4358655 RPE_0475 Rhodopseudomonas palustris BisA53 anaerobic benzoate catabolism transcriptional regulator YP_779414.1 524707 D 316055 CDS YP_779415.1 115522504 4358656 525935..526522 1 NC_008435.1 PFAM: beta-Ig-H3/fasciclin; KEGG: rpc:RPC_0244 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin 526522 4358656 RPE_0476 Rhodopseudomonas palustris BisA53 beta-Ig-H3/fasciclin YP_779415.1 525935 D 316055 CDS YP_779416.1 115522505 4358657 526735..527364 1 NC_008435.1 KEGG: rpc:RPC_0243 hypothetical protein; hypothetical protein 527364 4358657 RPE_0477 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779416.1 526735 D 316055 CDS YP_779417.1 115522506 4358658 527375..528154 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: oxidoreductase, molybdopterin binding; KEGG: rpb:RPB_0333 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 528154 4358658 RPE_0478 Rhodopseudomonas palustris BisA53 twin-arginine translocation pathway signal YP_779417.1 527375 D 316055 CDS YP_779418.1 115522507 4358659 complement(528403..529692) 1 NC_008435.1 PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: rpc:RPC_0241 major facilitator superfamily MFS_1; major facilitator transporter 529692 4358659 RPE_0479 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_779418.1 528403 R 316055 CDS YP_779419.1 115522508 4357861 529849..530961 1 NC_008435.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 530961 4357861 RPE_0480 Rhodopseudomonas palustris BisA53 3-isopropylmalate dehydrogenase YP_779419.1 529849 D 316055 CDS YP_779420.1 115522509 4357862 531234..531776 1 NC_008435.1 PFAM: protein of unknown function DUF1568; KEGG: rpb:RPB_1952 protein of unknown function DUF1568; hypothetical protein 531776 4357862 RPE_0481 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779420.1 531234 D 316055 CDS YP_779421.1 115522510 4357863 complement(531988..532359) 1 NC_008435.1 KEGG: rpc:RPC_0239 hypothetical protein; hypothetical protein 532359 4357863 RPE_0482 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779421.1 531988 R 316055 CDS YP_779422.1 115522511 4357864 complement(532556..532867) 1 NC_008435.1 KEGG: rpd:RPD_0492 hypothetical protein; hypothetical protein 532867 4357864 RPE_0483 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779422.1 532556 R 316055 CDS YP_779423.1 115522512 4357865 532996..534030 1 NC_008435.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 534030 4357865 RPE_0484 Rhodopseudomonas palustris BisA53 aspartate-semialdehyde dehydrogenase YP_779423.1 532996 D 316055 CDS YP_779424.1 115522513 4357866 534304..534873 1 NC_008435.1 PFAM: Uncharacterized protein UPF0114; KEGG: rpc:RPC_0236 uncharacterized protein UPF0114; hypothetical protein 534873 4357866 RPE_0485 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779424.1 534304 D 316055 CDS YP_779425.1 115522514 4357867 complement(534893..535786) 1 NC_008435.1 KEGG: rpc:RPC_0337 transcriptional regulator, AraC family; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; SMART: helix-turn-helix- domain containing protein, AraC type; methylated-DNA--protein-cysteine methyltransferase 535786 4357867 RPE_0486 Rhodopseudomonas palustris BisA53 methylated-DNA--protein-cysteine methyltransferase YP_779425.1 534893 R 316055 CDS YP_779426.1 115522515 4357868 complement(535839..536402) 1 NC_008435.1 KEGG: rpc:RPC_0338 hypothetical protein; hypothetical protein 536402 4357868 RPE_0487 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779426.1 535839 R 316055 CDS YP_779427.1 115522516 4357869 536418..537212 1 NC_008435.1 KEGG: rpa:RPA0343 endonuclease III DNA-(apurinic or apyrimidinic site) lyase; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III 537212 4357869 RPE_0488 Rhodopseudomonas palustris BisA53 endonuclease III YP_779427.1 536418 D 316055 CDS YP_779428.1 115522517 4357870 complement(537425..538180) 1 NC_008435.1 putative role in sulfur assimilation; CysZ-like protein 538180 4357870 RPE_0489 Rhodopseudomonas palustris BisA53 CysZ-like protein YP_779428.1 537425 R 316055 CDS YP_779429.1 115522518 4357871 complement(538257..539285) 1 NC_008435.1 KEGG: rpc:RPC_0442 hypothetical protein; hypothetical protein 539285 4357871 RPE_0490 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779429.1 538257 R 316055 CDS YP_779430.1 115522519 4357872 539339..540820 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_0443 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 540820 4357872 RPE_0491 Rhodopseudomonas palustris BisA53 twin-arginine translocation pathway signal YP_779430.1 539339 D 316055 CDS YP_779431.1 115522520 4357873 complement(540823..541140) 1 NC_008435.1 hypothetical protein 541140 4357873 RPE_0492 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779431.1 540823 R 316055 CDS YP_779432.1 115522521 4357874 complement(541226..543637) 1 NC_008435.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 543637 pheT 4357874 pheT Rhodopseudomonas palustris BisA53 phenylalanyl-tRNA synthetase subunit beta YP_779432.1 541226 R 316055 CDS YP_779433.1 115522522 4357875 complement(543634..544110) 1 NC_008435.1 KEGG: rpc:RPC_0445 hypothetical protein; hypothetical protein 544110 4357875 RPE_0494 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779433.1 543634 R 316055 CDS YP_779434.1 115522523 4357876 complement(544107..544403) 1 NC_008435.1 KEGG: rpc:RPC_0446 hypothetical protein; hypothetical protein 544403 4357876 RPE_0495 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779434.1 544107 R 316055 CDS YP_779435.1 115522524 4357877 complement(544420..545517) 1 NC_008435.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 545517 pheS 4357877 pheS Rhodopseudomonas palustris BisA53 phenylalanyl-tRNA synthetase subunit alpha YP_779435.1 544420 R 316055 CDS YP_779436.1 115522525 4358625 complement(545708..546067) 1 NC_008435.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 546067 rplT 4358625 rplT Rhodopseudomonas palustris BisA53 50S ribosomal protein L20 YP_779436.1 545708 R 316055 CDS YP_779437.1 115522526 4358626 complement(546153..546353) 1 NC_008435.1 PFAM: ribosomal protein L35; KEGG: nha:Nham_0076 ribosomal protein L35; 50S ribosomal protein L35 546353 rpmI 4358626 rpmI Rhodopseudomonas palustris BisA53 50S ribosomal protein L35 YP_779437.1 546153 R 316055 CDS YP_779438.1 115522527 4358627 546624..547061 1 NC_008435.1 KEGG: rpc:RPC_0450 hypothetical protein; hypothetical protein 547061 4358627 RPE_0499 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779438.1 546624 D 316055 CDS YP_779439.1 115522528 4358628 complement(547149..547604) 1 NC_008435.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 547604 infC 4358628 infC Rhodopseudomonas palustris BisA53 translation initiation factor IF-3 YP_779439.1 547149 R 316055 CDS YP_779440.1 115522529 4358629 548087..548884 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_0340 alpha/beta hydrolase fold; hypothetical protein 548884 4358629 RPE_0501 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779440.1 548087 D 316055 CDS YP_779441.1 115522530 4358630 complement(549056..550174) 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: rpc:RPC_0440 4Fe-4S ferredoxin, iron-sulfur binding; hypothetical protein 550174 4358630 RPE_0502 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779441.1 549056 R 316055 CDS YP_779442.1 115522531 4358631 complement(550479..551171) 1 NC_008435.1 PFAM: Glutathione S-transferase, C-terminal domain; KEGG: rpc:RPC_0439 glutathione S-transferase-like; glutathione S-transferase 551171 4358631 RPE_0503 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_779442.1 550479 R 316055 CDS YP_779443.1 115522532 4358632 551352..552158 1 NC_008435.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 552158 4358632 RPE_0504 Rhodopseudomonas palustris BisA53 undecaprenyl pyrophosphate phosphatase YP_779443.1 551352 D 316055 CDS YP_779444.1 115522533 4358633 complement(552190..553176) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: rpc:RPC_0437 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 553176 4358633 RPE_0505 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_779444.1 552190 R 316055 CDS YP_779445.1 115522534 4358635 553432..553980 1 NC_008435.1 KEGG: rpc:RPC_1154 thioesterase superfamily; thioesterase superfamily protein 553980 4358635 RPE_0506 Rhodopseudomonas palustris BisA53 thioesterase superfamily protein YP_779445.1 553432 D 316055 CDS YP_779446.1 115522535 4358636 554330..554845 1 NC_008435.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_0060 ErfK/YbiS/YcfS/YnhG; hypothetical protein 554845 4358636 RPE_0507 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779446.1 554330 D 316055 CDS YP_779447.1 115522536 4358637 555038..557059 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_0061 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 557059 4358637 RPE_0508 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_779447.1 555038 D 316055 CDS YP_779448.1 115522537 4358638 complement(557289..558275) 1 NC_008435.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpc:RPC_0073 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 558275 4358638 RPE_0509 Rhodopseudomonas palustris BisA53 cation diffusion facilitator family transporter YP_779448.1 557289 R 316055 CDS YP_779449.1 115522538 4358639 558568..558966 1 NC_008435.1 PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: rpb:RPB_0327 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b subunit 558966 4358639 RPE_0510 Rhodopseudomonas palustris BisA53 succinate dehydrogenase, cytochrome b subunit YP_779449.1 558568 D 316055 CDS YP_779450.1 115522539 4358640 558963..559376 1 NC_008435.1 PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: rpb:RPB_0326 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome b subunit 559376 4358640 RPE_0511 Rhodopseudomonas palustris BisA53 succinate dehydrogenase, cytochrome b subunit YP_779450.1 558963 D 316055 CDS YP_779451.1 115522540 4358641 559380..561203 1 NC_008435.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 561203 sdhA 4358641 sdhA Rhodopseudomonas palustris BisA53 succinate dehydrogenase flavoprotein subunit YP_779451.1 559380 D 316055 CDS YP_779452.1 115522541 4360149 561231..561671 1 NC_008435.1 hypothetical protein 561671 4360149 RPE_0513 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779452.1 561231 D 316055 CDS YP_779453.1 115522542 4360150 561683..562465 1 NC_008435.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 562465 sdhB 4360150 sdhB Rhodopseudomonas palustris BisA53 succinate dehydrogenase iron-sulfur subunit YP_779453.1 561683 D 316055 CDS YP_779454.1 115522543 4360151 562616..563104 1 NC_008435.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: rpd:RPD_0477 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 563104 4360151 RPE_0515 Rhodopseudomonas palustris BisA53 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_779454.1 562616 D 316055 CDS YP_779455.1 115522544 4360152 563104..563349 1 NC_008435.1 KEGG: rpc:RPC_0066 hypothetical protein; hypothetical protein 563349 4360152 RPE_0516 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779455.1 563104 D 316055 CDS YP_779456.1 115522545 4360153 563607..565493 1 NC_008435.1 PFAM: OmpA/MotB domain protein; KEGG: rpc:RPC_0065 OmpA/MotB; OmpA/MotB domain-containing protein 565493 4360153 RPE_0517 Rhodopseudomonas palustris BisA53 OmpA/MotB domain-containing protein YP_779456.1 563607 D 316055 CDS YP_779457.1 115522546 4360154 complement(565748..566143) 1 NC_008435.1 PFAM: membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG); KEGG: rpc:RPC_0077 membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG); membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) 566143 4360154 RPE_0518 Rhodopseudomonas palustris BisA53 membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) YP_779457.1 565748 R 316055 CDS YP_779458.1 115522547 4360155 complement(566209..567291) 1 NC_008435.1 KEGG: rpb:RPB_4688 hypothetical protein; hypothetical protein 567291 4360155 RPE_0519 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779458.1 566209 R 316055 CDS YP_779459.1 115522548 4360156 complement(567281..569746) 1 NC_008435.1 PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_0079 protein of unknown function DUF214; hypothetical protein 569746 4360156 RPE_0520 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779459.1 567281 R 316055 CDS YP_779460.1 115522549 4360157 complement(569743..570426) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0080 ABC transporter related; ABC transporter-like protein 570426 4360157 RPE_0521 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779460.1 569743 R 316055 CDS YP_779461.1 115522550 4360158 570609..571853 1 NC_008435.1 KEGG: rpc:RPC_0081 protein of unknown function DUF201; hypothetical protein 571853 4360158 RPE_0522 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779461.1 570609 D 316055 CDS YP_779462.1 115522551 4360159 complement(571862..572050) 1 NC_008435.1 KEGG: rpa:RPA4805 hypothetical protein; hypothetical protein 572050 4360159 RPE_0523 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779462.1 571862 R 316055 CDS YP_779463.1 115522552 4360160 572237..572437 1 NC_008435.1 KEGG: rpc:RPC_0082 hypothetical protein; hypothetical protein 572437 4360160 RPE_0524 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779463.1 572237 D 316055 CDS YP_779464.1 115522553 4360161 complement(572532..572972) 1 NC_008435.1 KEGG: rpc:RPC_0083 hypothetical protein; hypothetical protein 572972 4360161 RPE_0525 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779464.1 572532 R 316055 CDS YP_779465.1 115522554 4360162 complement(573108..575216) 1 NC_008435.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpd:RPD_4390 TonB-dependent receptor; TonB-dependent receptor, plug 575216 4360162 RPE_0526 Rhodopseudomonas palustris BisA53 TonB-dependent receptor, plug YP_779465.1 573108 R 316055 CDS YP_779466.1 115522555 4360163 575693..576742 1 NC_008435.1 PFAM: transport system permease protein; KEGG: rpc:RPC_0085 transport system permease protein; transport system permease 576742 4360163 RPE_0527 Rhodopseudomonas palustris BisA53 transport system permease YP_779466.1 575693 D 316055 CDS YP_779467.1 115522556 4360164 576739..577521 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0086 ABC transporter related; ABC transporter-like protein 577521 4360164 RPE_0528 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779467.1 576739 D 316055 CDS YP_779468.1 115522557 4360165 577518..578354 1 NC_008435.1 PFAM: periplasmic binding protein; KEGG: rpc:RPC_0087 periplasmic binding protein; periplasmic binding protein 578354 4360165 RPE_0529 Rhodopseudomonas palustris BisA53 periplasmic binding protein YP_779468.1 577518 D 316055 CDS YP_779469.1 115522558 4360012 578497..579168 1 NC_008435.1 PFAM: protein of unknown function DUF938; KEGG: rpc:RPC_0088 protein of unknown function DUF938; hypothetical protein 579168 4360012 RPE_0530 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779469.1 578497 D 316055 CDS YP_779470.1 115522559 4360013 579294..580523 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_0089 major facilitator superfamily MFS_1; major facilitator transporter 580523 4360013 RPE_0531 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_779470.1 579294 D 316055 CDS YP_779471.1 115522560 4360014 580669..581865 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpb:RPB_4675 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 581865 4360014 RPE_0532 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_779471.1 580669 D 316055 CDS YP_779472.1 115522561 4360015 complement(582190..583308) 1 NC_008435.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 583308 4360015 RPE_0533 Rhodopseudomonas palustris BisA53 transposase IS116/IS110/IS902 family protein YP_779472.1 582190 R 316055 CDS YP_779473.1 115522562 4360016 583418..584557 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_4383 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 584557 4360016 RPE_0534 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_779473.1 583418 D 316055 CDS YP_779474.1 115522563 4360017 complement(584936..585979) 1 NC_008435.1 SMART: extracellular solute-binding protein, family 3; KEGG: rpa:RPA4797 ABC transporter, amino acid binding protein; extracellular solute-binding protein 585979 4360017 RPE_0535 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_779474.1 584936 R 316055 CDS YP_779475.1 115522564 4360018 complement(586028..586618) 1 NC_008435.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpd:RPD_4381 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 586618 4360018 RPE_0536 Rhodopseudomonas palustris BisA53 ErfK/YbiS/YcfS/YnhG family protein YP_779475.1 586028 R 316055 CDS YP_779476.1 115522565 4360019 complement(586907..587041) 1 NC_008435.1 KEGG: rpc:RPC_0090 hypothetical protein; hypothetical protein 587041 4360019 RPE_0537 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779476.1 586907 R 316055 CDS YP_779477.1 115522566 4360020 complement(587038..588054) 1 NC_008435.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: rpc:RPC_0091 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 588054 4360020 RPE_0538 Rhodopseudomonas palustris BisA53 cytochrome d ubiquinol oxidase subunit II YP_779477.1 587038 R 316055 CDS YP_779478.1 115522567 4360021 complement(588056..589462) 1 NC_008435.1 PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: rpc:RPC_0092 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 589462 4360021 RPE_0539 Rhodopseudomonas palustris BisA53 cytochrome bd ubiquinol oxidase subunit I YP_779478.1 588056 R 316055 CDS YP_779479.1 115522568 4360022 complement(589811..590422) 1 NC_008435.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 590422 4360022 RPE_0540 Rhodopseudomonas palustris BisA53 RNA polymerase sigma factor YP_779479.1 589811 R 316055 CDS YP_779480.1 115522569 4360023 complement(590618..591355) 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpa:RPA4791 two-component transcriptional regulator, winged helix family; two component transcriptional regulator 591355 4360023 RPE_0541 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_779480.1 590618 R 316055 CDS YP_779481.1 115522570 4360024 complement(591352..593013) 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_0095 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 593013 4360024 RPE_0542 Rhodopseudomonas palustris BisA53 response regulator receiver sensor signal transduction histidine kinase YP_779481.1 591352 R 316055 CDS YP_779482.1 115522571 4360025 complement(593070..595154) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_0096 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase 595154 4360025 RPE_0543 Rhodopseudomonas palustris BisA53 sensor signal transduction histidine kinase YP_779482.1 593070 R 316055 CDS YP_779483.1 115522572 4360026 595364..596656 1 NC_008435.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_0097 extracellular solute-binding protein, family 1; extracellular solute-binding protein 596656 4360026 RPE_0544 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_779483.1 595364 D 316055 CDS YP_779484.1 115522573 4360027 complement(596740..597063) 1 NC_008435.1 hypothetical protein 597063 4360027 RPE_0545 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779484.1 596740 R 316055 CDS YP_779485.1 115522574 4360028 597267..598463 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_4371 twin-arginine translocation pathway signal; extracellular ligand-binding receptor 598463 4360028 RPE_0546 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_779485.1 597267 D 316055 CDS YP_779486.1 115522575 4360029 598628..599545 1 NC_008435.1 PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: rpc:RPC_0346 pirin-like; pirin domain-containing protein 599545 4360029 RPE_0547 Rhodopseudomonas palustris BisA53 pirin domain-containing protein YP_779486.1 598628 D 316055 CDS YP_779487.1 115522576 4357878 599614..600531 1 NC_008435.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 600531 4357878 RPE_0548 Rhodopseudomonas palustris BisA53 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_779487.1 599614 D 316055 CDS YP_779488.1 115522577 4357879 complement(600572..601705) 1 NC_008435.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 601705 4357879 RPE_0549 Rhodopseudomonas palustris BisA53 gamma-glutamyl kinase YP_779488.1 600572 R 316055 CDS YP_779489.1 115522578 4357880 complement(601889..602938) 1 NC_008435.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 602938 obgE 4357880 obgE Rhodopseudomonas palustris BisA53 GTPase ObgE YP_779489.1 601889 R 316055 CDS YP_779490.1 115522579 4357881 603058..603969 1 NC_008435.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpd:RPD_0585 protein of unknown function DUF6, transmembrane; hypothetical protein 603969 4357881 RPE_0551 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779490.1 603058 D 316055 CDS YP_779491.1 115522580 4357882 604141..604431 1 NC_008435.1 hypothetical protein 604431 4357882 RPE_0552 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779491.1 604141 D 316055 CDS YP_779492.1 115522581 4357883 complement(604772..605719) 1 NC_008435.1 PFAM: formate/nitrite transporter; KEGG: rpc:RPC_4565 formate/nitrite transporter; formate/nitrite transporter 605719 4357883 RPE_0553 Rhodopseudomonas palustris BisA53 formate/nitrite transporter YP_779492.1 604772 R 316055 CDS YP_779493.1 115522582 4357884 complement(605967..606563) 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_0155 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 606563 4357884 RPE_0554 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_779493.1 605967 R 316055 CDS YP_779494.1 115522583 4357885 complement(606713..606982) 1 NC_008435.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 606982 rpmA 4357885 rpmA Rhodopseudomonas palustris BisA53 50S ribosomal protein L27 YP_779494.1 606713 R 316055 CDS YP_779495.1 115522584 4357886 complement(607064..607438) 1 NC_008435.1 PFAM: ribosomal protein L21; KEGG: rpb:RPB_0246 ribosomal protein L21; 50S ribosomal protein L21 607438 rplU 4357886 rplU Rhodopseudomonas palustris BisA53 50S ribosomal protein L21 YP_779495.1 607064 R 316055 CDS YP_779496.1 115522585 4357887 607834..609009 1 NC_008435.1 KEGG: rpc:RPC_0152 hypothetical protein; hypothetical protein 609009 4357887 RPE_0557 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779496.1 607834 D 316055 CDS YP_779497.1 115522586 4357889 609299..610942 1 NC_008435.1 PFAM: phage integrase family protein; KEGG: ret:RHE_CH00241 putative recombinase protein, phage integrase family; phage integrase family protein 610942 4357889 RPE_0558 Rhodopseudomonas palustris BisA53 phage integrase family protein YP_779497.1 609299 D 316055 CDS YP_779498.1 115522587 4357890 610939..611280 1 NC_008435.1 hypothetical protein 611280 4357890 RPE_0559 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779498.1 610939 D 316055 CDS YP_779499.1 115522588 4357891 611404..614295 1 NC_008435.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: xcb:XC_0536 helicase; SNF2-like protein 614295 4357891 RPE_0560 Rhodopseudomonas palustris BisA53 SNF2-like protein YP_779499.1 611404 D 316055 CDS YP_779500.1 115522589 4357892 614292..616082 1 NC_008435.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: eba:ebA2416 adenine specific DNA methylase MOD; DNA methylase N-4/N-6 domain-containing protein 616082 4357892 RPE_0561 Rhodopseudomonas palustris BisA53 DNA methylase N-4/N-6 domain-containing protein YP_779500.1 614292 D 316055 CDS YP_779501.1 115522590 4357893 616082..618766 1 NC_008435.1 PFAM: type III restriction enzyme, res subunit; KEGG: tbd:Tbd_0937 hypothetical protein; type III restriction enzyme, res subunit 618766 4357893 RPE_0562 Rhodopseudomonas palustris BisA53 type III restriction enzyme, res subunit YP_779501.1 616082 D 316055 CDS YP_779502.1 115522591 4359088 618933..620498 1 NC_008435.1 KEGG: nha:Nham_0139 hypothetical protein; hypothetical protein 620498 4359088 RPE_0563 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779502.1 618933 D 316055 CDS YP_779503.1 115522592 4359089 complement(621349..621738) 1 NC_008435.1 hypothetical protein 621738 4359089 RPE_0564 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779503.1 621349 R 316055 CDS YP_779504.1 115522593 4359090 621932..622225 1 NC_008435.1 hypothetical protein 622225 4359090 RPE_0565 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779504.1 621932 D 316055 CDS YP_779505.1 115522594 4359091 622209..622484 1 NC_008435.1 hypothetical protein 622484 4359091 RPE_0566 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779505.1 622209 D 316055 CDS YP_779506.1 115522595 4359092 complement(622803..623060) 1 NC_008435.1 hypothetical protein 623060 4359092 RPE_0567 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779506.1 622803 R 316055 CDS YP_779507.1 115522596 4359093 623228..625360 1 NC_008435.1 KEGG: rpb:RPB_3050 hypothetical protein; hypothetical protein 625360 4359093 RPE_0568 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779507.1 623228 D 316055 CDS YP_779508.1 115522597 4359094 complement(626347..627216) 1 NC_008435.1 KEGG: reu:Reut_A0008 HNH endonuclease; restriction endonuclease-like protein 627216 4359094 RPE_0569 Rhodopseudomonas palustris BisA53 restriction endonuclease-like protein YP_779508.1 626347 R 316055 CDS YP_779509.1 115522598 4359096 complement(628259..629149) 1 NC_008435.1 hypothetical protein 629149 4359096 RPE_0571 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779509.1 628259 R 316055 CDS YP_779510.1 115522599 4359097 complement(629414..629776) 1 NC_008435.1 TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; KEGG: sth:STH2337 ribose 5-phosphate isomerase; ribose 5-phosphate isomerase B 629776 4359097 RPE_0572 Rhodopseudomonas palustris BisA53 ribose 5-phosphate isomerase B YP_779510.1 629414 R 316055 CDS YP_779511.1 115522600 4359098 complement(629881..630567) 1 NC_008435.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: eci:UTI89_C4681 D-allulose-6-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 630567 4359098 RPE_0573 Rhodopseudomonas palustris BisA53 ribulose-phosphate 3-epimerase YP_779511.1 629881 R 316055 CDS YP_779512.1 115522601 4359099 complement(630596..631552) 1 NC_008435.1 PFAM: beta-lactamase; KEGG: dge:Dgeo_0953 beta-lactamase; beta-lactamase 631552 4359099 RPE_0574 Rhodopseudomonas palustris BisA53 beta-lactamase YP_779512.1 630596 R 316055 CDS YP_779513.1 115522602 4359100 complement(631564..632796) 1 NC_008435.1 hypothetical protein 632796 4359100 RPE_0575 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779513.1 631564 R 316055 CDS YP_779514.1 115522603 4359101 complement(632857..635208) 1 NC_008435.1 hypothetical protein 635208 4359101 RPE_0576 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779514.1 632857 R 316055 CDS YP_779515.1 115522604 4359102 complement(636114..637109) 1 NC_008435.1 hypothetical protein 637109 4359102 RPE_0577 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779515.1 636114 R 316055 CDS YP_779516.1 115522605 4359103 637551..638279 1 NC_008435.1 hypothetical protein 638279 4359103 RPE_0578 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779516.1 637551 D 316055 CDS YP_779517.1 115522606 4359104 complement(638654..639691) 1 NC_008435.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 639691 nadE 4359104 nadE Rhodopseudomonas palustris BisA53 NAD synthetase YP_779517.1 638654 R 316055 CDS YP_779518.1 115522607 4359105 complement(639688..641229) 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sme:SMb20650 putative long-chain fatty-acid-CoA ligase protein; AMP-dependent synthetase and ligase 641229 4359105 RPE_0580 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_779518.1 639688 R 316055 CDS YP_779519.1 115522608 4358086 complement(641280..641546) 1 NC_008435.1 KEGG: sme:SMb20651 hypothetical protein; hypothetical protein 641546 4358086 RPE_0581 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779519.1 641280 R 316055 CDS YP_779520.1 115522609 4358087 complement(641559..643511) 1 NC_008435.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase, class-II; asparagine synthase; KEGG: sme:SMb20652 putative asparagine synthetase protein; asparagine synthase 643511 4358087 RPE_0582 Rhodopseudomonas palustris BisA53 asparagine synthase YP_779520.1 641559 R 316055 CDS YP_779521.1 115522610 4358088 643899..645104 1 NC_008435.1 KEGG: sme:SMb21515 hypothetical protein; hypothetical protein 645104 4358088 RPE_0583 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779521.1 643899 D 316055 CDS YP_779522.1 115522611 4358089 complement(645201..646652) 1 NC_008435.1 KEGG: rpa:RPA0677 hypothetical protein; hypothetical protein 646652 4358089 RPE_0584 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779522.1 645201 R 316055 CDS YP_779523.1 115522612 4358090 complement(646804..648498) 1 NC_008435.1 cleaves the ring of 2,3-dihydro-2,3-dihydroxybenzoyl-CoA forming 6-hydroxy-3-hexenoyl-CoA; benzoyl-CoA-dihydrodiol lyase 648498 4358090 RPE_0585 Rhodopseudomonas palustris BisA53 benzoyl-CoA-dihydrodiol lyase YP_779523.1 646804 R 316055 CDS YP_779524.1 115522613 4358091 complement(648605..649435) 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA0675 possible hydrolase (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold protein 649435 4358091 RPE_0586 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_779524.1 648605 R 316055 CDS YP_779525.1 115522614 4358092 complement(649460..650629) 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpa:RPA0674 possible alcohol dehydrogenase class III family; alcohol dehydrogenase 650629 4358092 RPE_0587 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_779525.1 649460 R 316055 CDS YP_779526.1 115522615 4358093 650803..651528 1 NC_008435.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: rpd:RPD_1522 cyclic nucleotide-binding; Crp/FNR family transcriptional regulator 651528 4358093 RPE_0588 Rhodopseudomonas palustris BisA53 Crp/FNR family transcriptional regulator YP_779526.1 650803 D 316055 CDS YP_779527.1 115522616 4358094 complement(651561..652547) 1 NC_008435.1 PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rpd:RPD_1523 molybdopterin dehydrogenase, FAD-binding; molybdopterin dehydrogenase protein 652547 4358094 RPE_0589 Rhodopseudomonas palustris BisA53 molybdopterin dehydrogenase protein YP_779527.1 651561 R 316055 CDS YP_779528.1 115522617 4358095 complement(652544..654880) 1 NC_008435.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpc:RPC_1014 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 654880 4358095 RPE_0590 Rhodopseudomonas palustris BisA53 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_779528.1 652544 R 316055 CDS YP_779529.1 115522618 4358096 complement(654877..655368) 1 NC_008435.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rpd:RPD_1525 (2Fe-2S)-binding; 2Fe-2S iron-sulfur cluster binding domain-containing protein 655368 4358096 RPE_0591 Rhodopseudomonas palustris BisA53 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_779529.1 654877 R 316055 CDS YP_779530.1 115522619 4358097 655533..657098 1 NC_008435.1 TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: rpc:RPC_1016 benzoate-CoA ligase family; benzoate-CoA ligase family 657098 4358097 RPE_0592 Rhodopseudomonas palustris BisA53 benzoate-CoA ligase family YP_779530.1 655533 D 316055 CDS YP_779531.1 115522620 4358098 657245..658423 1 NC_008435.1 TIGRFAM:Twin-arginine translocation pathway signal; PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_1017 twin-arginine translocation pathway signal; extracellular ligand-binding receptor 658423 4358098 RPE_0593 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_779531.1 657245 D 316055 CDS YP_779532.1 115522621 4358099 658523..659383 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpa:RPA0667 putative membrane spanning subunit of ABC transporter; inner-membrane translocator 659383 4358099 RPE_0594 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_779532.1 658523 D 316055 CDS YP_779533.1 115522622 4358100 659385..661175 1 NC_008435.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1019 ABC transporter related; ABC transporter-like protein 661175 4358100 RPE_0595 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779533.1 659385 D 316055 CDS YP_779534.1 115522623 4358101 661172..661894 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1020 ABC transporter related; ABC transporter-like protein 661894 4358101 RPE_0596 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779534.1 661172 D 316055 CDS YP_779535.1 115522624 4358102 661921..662889 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpd:RPD_1527 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 662889 4358102 RPE_0597 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_779535.1 661921 D 316055 CDS YP_779536.1 115522625 4357962 662927..663406 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_1022 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 663406 4357962 RPE_0598 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_779536.1 662927 D 316055 CDS YP_779537.1 115522626 4357963 663484..663945 1 NC_008435.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Helix-turn-helix, type 11 domain protein; KEGG: rpc:RPC_1023 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 663945 4357963 RPE_0599 Rhodopseudomonas palustris BisA53 BadM/Rrf2 family transcriptional regulator YP_779537.1 663484 D 316055 CDS YP_779538.1 115522627 4357964 complement(663966..664490) 1 NC_008435.1 PFAM: Rubrerythrin; KEGG: rpd:RPD_1530 rubrerythrin; rubrerythrin 664490 4357964 RPE_0600 Rhodopseudomonas palustris BisA53 rubrerythrin YP_779538.1 663966 R 316055 CDS YP_779539.1 115522628 4357965 complement(664487..665326) 1 NC_008435.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: rpd:RPD_1531 pyruvate/2-ketoisovalerate 2-oxoacid:acceptor oxidoreductase, beta subunit; pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta 665326 4357965 RPE_0601 Rhodopseudomonas palustris BisA53 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta YP_779539.1 664487 R 316055 CDS YP_779540.1 115522629 4357966 complement(665323..667056) 1 NC_008435.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: rpd:RPD_1532 pyruvate flavodoxin/ferredoxin oxidoreductase-like; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 667056 4357966 RPE_0602 Rhodopseudomonas palustris BisA53 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_779540.1 665323 R 316055 CDS YP_779541.1 115522630 4357967 complement(667165..667410) 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpa:RPA0662 ferredoxin; 4Fe-4S ferredoxin 667410 4357967 RPE_0603 Rhodopseudomonas palustris BisA53 4Fe-4S ferredoxin YP_779541.1 667165 R 316055 CDS YP_779542.1 115522631 4357968 complement(667443..669014) 1 NC_008435.1 TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: rpc:RPC_1025 benzoate-CoA ligase family; benzoate-CoA ligase family 669014 4357968 RPE_0604 Rhodopseudomonas palustris BisA53 benzoate-CoA ligase family YP_779542.1 667443 R 316055 CDS YP_779543.1 115522632 4357969 complement(669124..669957) 1 NC_008435.1 TIGRFAM: putative CoA-substrate-specific enzyme activase; benzoyl-CoA reductase, subunit D; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: rpc:RPC_1026 benzoyl-CoA reductase, subunit D; benzoyl-CoA reductase subunit D 669957 4357969 RPE_0605 Rhodopseudomonas palustris BisA53 benzoyl-CoA reductase subunit D YP_779543.1 669124 R 316055 CDS YP_779544.1 115522633 4357970 complement(669968..671281) 1 NC_008435.1 TIGRFAM: putative CoA-substrate-specific enzyme activase; benzoyl-CoA reductase, subunit A; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: rpc:RPC_1027 benzoyl-CoA reductase, subunit A; benzoyl-CoA reductase subunit A 671281 4357970 RPE_0606 Rhodopseudomonas palustris BisA53 benzoyl-CoA reductase subunit A YP_779544.1 669968 R 316055 CDS YP_779545.1 115522634 4357971 complement(671291..672601) 1 NC_008435.1 TIGRFAM: benzoyl-CoA reductase, subunit B; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: rpd:RPD_1537 benzoyl-CoA reductase, subunit B; benzoyl-CoA reductase subunit B 672601 4357971 RPE_0607 Rhodopseudomonas palustris BisA53 benzoyl-CoA reductase subunit B YP_779545.1 671291 R 316055 CDS YP_779546.1 115522635 4357972 complement(672598..673782) 1 NC_008435.1 TIGRFAM: benzoyl-CoA reductase, subunit C; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: rpc:RPC_1029 benzoyl-CoA reductase, subunit C; benzoyl-CoA reductase subunit C 673782 4357972 RPE_0608 Rhodopseudomonas palustris BisA53 benzoyl-CoA reductase subunit C YP_779546.1 672598 R 316055 CDS YP_779547.1 115522636 4357973 complement(674145..675164) 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_1030 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 675164 4357973 RPE_0609 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_779547.1 674145 R 316055 CDS YP_779548.1 115522637 4357974 complement(675240..675767) 1 NC_008435.1 PFAM: regulatory protein, MarR; KEGG: rpc:RPC_1031 transcriptional regulator, MarR family; MarR family transcriptional regulator 675767 4357974 RPE_0610 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_779548.1 675240 R 316055 CDS YP_779549.1 115522638 4357975 675902..676669 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpc:RPC_1032 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 676669 4357975 RPE_0611 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_779549.1 675902 D 316055 CDS YP_779550.1 115522639 4357976 676696..677478 1 NC_008435.1 TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_1033 naphthoate synthase; naphthoate synthase 677478 4357976 RPE_0612 Rhodopseudomonas palustris BisA53 naphthoate synthase YP_779550.1 676696 D 316055 CDS YP_779551.1 115522640 4357977 677552..678703 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpc:RPC_1034 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 678703 4357977 RPE_0613 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_779551.1 677552 D 316055 CDS YP_779552.1 115522641 4357978 678749..680392 1 NC_008435.1 AliA; in Rhodopseudomonas palustris, this enzyme was found to act on 3-chlorobenzoate and allows the organism to grow on this substrate; cyclohexanecarboxylate-CoA ligase 680392 4357978 RPE_0614 Rhodopseudomonas palustris BisA53 cyclohexanecarboxylate-CoA ligase YP_779552.1 678749 D 316055 CDS YP_779553.1 115522642 4357979 680445..681221 1 NC_008435.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_1036 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 681221 4357979 RPE_0615 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase/isomerase YP_779553.1 680445 D 316055 CDS YP_779554.1 115522643 4359715 681355..682416 1 NC_008435.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: cya:CYA_0261 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 682416 4359715 RPE_0616 Rhodopseudomonas palustris BisA53 succinylglutamate desuccinylase/aspartoacylase YP_779554.1 681355 D 316055 CDS YP_779555.1 115522644 4359716 682456..684033 1 NC_008435.1 PFAM: protein of unknown function DUF201; KEGG: ava:Ava_0168 hypothetical protein; hypothetical protein 684033 4359716 RPE_0617 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779555.1 682456 D 316055 CDS YP_779556.1 115522645 4359717 complement(684039..685955) 1 NC_008435.1 PFAM: von Willebrand factor, type A; KEGG: rpa:RPA1458 dinitrification protein NorD; von Willebrand factor, type A 685955 4359717 RPE_0618 Rhodopseudomonas palustris BisA53 von Willebrand factor, type A YP_779556.1 684039 R 316055 CDS YP_779557.1 115522646 4359718 complement(686296..687414) 1 NC_008435.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 687414 4359718 RPE_0619 Rhodopseudomonas palustris BisA53 transposase IS116/IS110/IS902 family protein YP_779557.1 686296 R 316055 CDS YP_779558.1 115522647 4359719 complement(687501..688322) 1 NC_008435.1 PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: rpa:RPA1457 regulatory protein NorQ, probable ATPase; ATPase 688322 4359719 RPE_0620 Rhodopseudomonas palustris BisA53 ATPase YP_779558.1 687501 R 316055 CDS YP_779559.1 115522648 4359720 complement(688381..689727) 1 NC_008435.1 PFAM: cytochrome c oxidase, subunit I; KEGG: rpa:RPA1456 nitric-oxide reductase subunit B; cytochrome c oxidase subunit I 689727 4359720 RPE_0621 Rhodopseudomonas palustris BisA53 cytochrome c oxidase subunit I YP_779559.1 688381 R 316055 CDS YP_779560.1 115522649 4359721 complement(689761..690213) 1 NC_008435.1 KEGG: bja:blr3214 nitric oxide reductase subunit C; nitric-oxide reductase 690213 4359721 RPE_0622 Rhodopseudomonas palustris BisA53 nitric-oxide reductase YP_779560.1 689761 R 316055 CDS YP_779561.1 115522650 4359722 complement(690339..690623) 1 NC_008435.1 KEGG: rpa:RPA1454 hypothetical protein; hypothetical protein 690623 4359722 RPE_0623 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779561.1 690339 R 316055 CDS YP_779562.1 115522651 4359723 complement(690629..691222) 1 NC_008435.1 PFAM: cytochrome c oxidase, subunit III; KEGG: bja:blr3212 nitric oxide reductase subunit E; cytochrome c oxidase subunit III 691222 4359723 RPE_0624 Rhodopseudomonas palustris BisA53 cytochrome c oxidase subunit III YP_779562.1 690629 R 316055 CDS YP_779563.1 115522652 4359724 691710..692180 1 NC_008435.1 KEGG: rpa:RPA2067 hypothetical protein; hypothetical protein 692180 4359724 RPE_0625 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779563.1 691710 D 316055 CDS YP_779564.1 115522653 4359725 complement(692584..692763) 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpb:RPB_4447 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 692763 4359725 RPE_0626 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_779564.1 692584 R 316055 CDS YP_779565.1 115522654 4359726 complement(692778..692909) 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_3789 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 692909 4359726 RPE_0627 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_779565.1 692778 R 316055 CDS YP_779566.1 115522655 4359727 complement(693894..694073) 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpb:RPB_4447 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 694073 4359727 RPE_0628 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_779566.1 693894 R 316055 CDS YP_779567.1 115522656 4359728 complement(694088..694231) 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpa:RPA2654 light harvesting protein B-800-850, beta chain A (antenna pigment protein, beta chain A) (LH II-A beta); antenna complex subunit alpha/beta 694231 4359728 RPE_0629 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_779567.1 694088 R 316055 CDS YP_779568.1 115522657 4359729 694636..695349 1 NC_008435.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: rpa:RPA3014 two-component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 695349 4359729 RPE_0630 Rhodopseudomonas palustris BisA53 two component LuxR family transcriptional regulator YP_779568.1 694636 D 316055 CDS YP_779569.1 115522658 4359730 695586..697883 1 NC_008435.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Phytochrome, central region domain protein; PAS fold-2 domain protein; KEGG: rpb:RPB_4450 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 697883 4359730 RPE_0631 Rhodopseudomonas palustris BisA53 multi-sensor signal transduction histidine kinase YP_779569.1 695586 D 316055 CDS YP_779570.1 115522659 4359731 697880..700210 1 NC_008435.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Phytochrome, central region domain protein; PAS fold-2 domain protein; KEGG: rpb:RPB_4451 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 700210 4359731 RPE_0632 Rhodopseudomonas palustris BisA53 multi-sensor signal transduction histidine kinase YP_779570.1 697880 D 316055 CDS YP_779571.1 115522660 4358103 700207..700671 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpb:RPB_4452 response regulator receiver domain protein; response regulator receiver protein 700671 4358103 RPE_0633 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_779571.1 700207 D 316055 CDS YP_779572.1 115522661 4358104 700668..701807 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: rpd:RPD_2405 ATP-binding region, ATPase-like; response regulator receiver sensor signal transduction histidine kinase 701807 4358104 RPE_0634 Rhodopseudomonas palustris BisA53 response regulator receiver sensor signal transduction histidine kinase YP_779572.1 700668 D 316055 CDS YP_779573.1 115522662 4358105 701936..705385 1 NC_008435.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate; pyruvate carboxylase 705385 4358105 RPE_0635 Rhodopseudomonas palustris BisA53 pyruvate carboxylase YP_779573.1 701936 D 316055 CDS YP_779574.1 115522663 4358106 705650..706693 1 NC_008435.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 706693 4358106 RPE_0636 Rhodopseudomonas palustris BisA53 guanosine 5'-monophosphate oxidoreductase YP_779574.1 705650 D 316055 CDS YP_779575.1 115522664 4358107 707029..707904 1 NC_008435.1 PFAM: putative RNA methylase; methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mth:MTH1329 methyltransferase related protein; methyltransferase small 707904 4358107 RPE_0637 Rhodopseudomonas palustris BisA53 methyltransferase small YP_779575.1 707029 D 316055 CDS YP_779576.1 115522665 4358108 707963..710005 1 NC_008435.1 PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpa:RPA0679 hypothetical protein; radical SAM domain-containing protein 710005 4358108 RPE_0638 Rhodopseudomonas palustris BisA53 radical SAM domain-containing protein YP_779576.1 707963 D 316055 CDS YP_779577.1 115522666 4358109 complement(710032..710436) 1 NC_008435.1 KEGG: rpc:RPC_2253 AtsE; AtsE 710436 4358109 RPE_0639 Rhodopseudomonas palustris BisA53 AtsE YP_779577.1 710032 R 316055 CDS YP_779578.1 115522667 4358110 complement(710546..710878) 1 NC_008435.1 hypothetical protein 710878 4358110 RPE_0640 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779578.1 710546 R 316055 CDS YP_779579.1 115522668 4358112 complement(712648..714126) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpb:RPB_0686 signal transduction histidine kinase, nitrogen specific, NtrB; sensor signal transduction histidine kinase 714126 4358112 RPE_0641 Rhodopseudomonas palustris BisA53 sensor signal transduction histidine kinase YP_779579.1 712648 R 316055 CDS YP_779580.1 115522669 4358113 714476..714610 1 NC_008435.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 714610 rpmH 4358113 rpmH Rhodopseudomonas palustris BisA53 50S ribosomal protein L34 YP_779580.1 714476 D 316055 CDS YP_779581.1 115522670 4358114 714634..714975 1 NC_008435.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: rpb:RPB_0684 ribonuclease P protein component; ribonuclease P protein component 714975 4358114 RPE_0643 Rhodopseudomonas palustris BisA53 ribonuclease P protein component YP_779581.1 714634 D 316055 CDS YP_779582.1 115522671 4358115 714993..716873 1 NC_008435.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 716873 4358115 RPE_0644 Rhodopseudomonas palustris BisA53 putative inner membrane protein translocase component YidC YP_779582.1 714993 D 316055 CDS YP_779583.1 115522672 4358116 716986..717636 1 NC_008435.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 717636 engB 4358116 engB Rhodopseudomonas palustris BisA53 ribosome biogenesis GTP-binding protein YsxC YP_779583.1 716986 D 316055 CDS YP_779584.1 115522673 4358117 717636..718013 1 NC_008435.1 PFAM: protein of unknown function DUF423; KEGG: rpc:RPC_0815 protein of unknown function DUF423; hypothetical protein 718013 4358117 RPE_0646 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779584.1 717636 D 316055 CDS YP_779585.1 115522674 4358118 718117..719013 1 NC_008435.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 719013 4358118 RPE_0647 Rhodopseudomonas palustris BisA53 acetylglutamate kinase YP_779585.1 718117 D 316055 CDS YP_779586.1 115522675 4358119 719184..720185 1 NC_008435.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_0813 hypothetical protein; peptidoglycan binding domain-containing protein 720185 4358119 RPE_0648 Rhodopseudomonas palustris BisA53 peptidoglycan binding domain-containing protein YP_779586.1 719184 D 316055 CDS YP_779587.1 115522676 4357774 720235..720933 1 NC_008435.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpa:RPA0627 putative haloacid dehalogenase superfamily hydrolase; pyrimidine 5'-nucleotidase 720933 4357774 RPE_0649 Rhodopseudomonas palustris BisA53 pyrimidine 5'-nucleotidase YP_779587.1 720235 D 316055 CDS YP_779588.1 115522677 4357775 complement(721007..721306) 1 NC_008435.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: bja:blr8111 hypothetical protein; excinuclease ABC subunit C 721306 4357775 RPE_0650 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_779588.1 721007 R 316055 CDS YP_779589.1 115522678 4357776 721484..722329 1 NC_008435.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 722329 dapD 4357776 dapD Rhodopseudomonas palustris BisA53 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_779589.1 721484 D 316055 CDS YP_779590.1 115522679 4357777 722310..722858 1 NC_008435.1 PFAM: protein of unknown function DUF805; KEGG: rpc:RPC_0810 protein of unknown function DUF805; hypothetical protein 722858 4357777 RPE_0652 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779590.1 722310 D 316055 CDS YP_779591.1 115522680 4357778 722874..724037 1 NC_008435.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 724037 4357778 RPE_0653 Rhodopseudomonas palustris BisA53 succinyl-diaminopimelate desuccinylase YP_779591.1 722874 D 316055 CDS YP_779592.1 115522681 4357779 complement(724188..724928) 1 NC_008435.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 724928 truA 4357779 truA Rhodopseudomonas palustris BisA53 tRNA pseudouridine synthase A YP_779592.1 724188 R 316055 CDS YP_779593.1 115522682 4357780 complement(725097..726080) 1 NC_008435.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 726080 fmt 4357780 fmt Rhodopseudomonas palustris BisA53 methionyl-tRNA formyltransferase YP_779593.1 725097 R 316055 CDS YP_779594.1 115522683 4357781 complement(726112..726654) 1 NC_008435.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 726654 def 4357781 def Rhodopseudomonas palustris BisA53 peptide deformylase YP_779594.1 726112 R 316055 CDS YP_779595.1 115522684 4357782 726840..728027 1 NC_008435.1 PFAM: protein of unknown function DUF195; KEGG: rpc:RPC_0802 protein of unknown function DUF195; hypothetical protein 728027 4357782 RPE_0657 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779595.1 726840 D 316055 CDS YP_779596.1 115522685 4357783 complement(728031..729056) 1 NC_008435.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpd:RPD_4335 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 729056 4357783 RPE_0658 Rhodopseudomonas palustris BisA53 cyclopropane-fatty-acyl-phospholipid synthase YP_779596.1 728031 R 316055 CDS YP_779597.1 115522686 4357784 complement(729053..729859) 1 NC_008435.1 PFAM: protein of unknown function DUF1295; KEGG: rpd:RPD_4336 protein of unknown function DUF1295; hypothetical protein 729859 4357784 RPE_0659 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779597.1 729053 R 316055 CDS YP_779598.1 115522687 4357785 730014..730994 1 NC_008435.1 KEGG: rpc:RPC_0801 hypothetical protein; hypothetical protein 730994 4357785 RPE_0660 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779598.1 730014 D 316055 CDS YP_779599.1 115522688 4357786 730998..732023 1 NC_008435.1 PFAM: OmpA/MotB domain protein; KEGG: rpc:RPC_0800 OmpA/MotB; hypothetical protein 732023 4357786 RPE_0661 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779599.1 730998 D 316055 CDS YP_779600.1 115522689 4357787 732183..732677 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_0799 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 732677 4357787 RPE_0662 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_779600.1 732183 D 316055 CDS YP_779601.1 115522690 4357788 732686..732913 1 NC_008435.1 KEGG: rpc:RPC_0798 hypothetical protein; hypothetical protein 732913 4357788 RPE_0663 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779601.1 732686 D 316055 CDS YP_779602.1 115522691 4357789 complement(732922..734829) 1 NC_008435.1 KEGG: rpc:RPC_0797 ABC transporter, ATP-binding/permease protein; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein 734829 4357789 RPE_0664 Rhodopseudomonas palustris BisA53 lipid ABC transporter ATPase/inner membrane protein YP_779602.1 732922 R 316055 CDS YP_779603.1 115522692 4357790 734998..735219 1 NC_008435.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 735219 rpmE 4357790 rpmE Rhodopseudomonas palustris BisA53 50S ribosomal protein L31 YP_779603.1 734998 D 316055 CDS YP_779604.1 115522693 4358293 complement(735308..735823) 1 NC_008435.1 PFAM: protein of unknown function DUF1465; KEGG: rpc:RPC_0792 protein of unknown function DUF1465; hypothetical protein 735823 4358293 RPE_0666 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779604.1 735308 R 316055 CDS YP_779605.1 115522694 4358294 complement(736211..736408) 1 NC_008435.1 PFAM: protein of unknown function DUF1192; KEGG: rpc:RPC_0791 protein of unknown function DUF1192; hypothetical protein 736408 4358294 RPE_0667 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779605.1 736211 R 316055 CDS YP_779606.1 115522695 4358295 736512..737510 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpa:RPA0915 putative NADPH quinone oxidoreductase; alcohol dehydrogenase 737510 4358295 RPE_0668 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_779606.1 736512 D 316055 CDS YP_779607.1 115522696 4358296 737727..740603 1 NC_008435.1 KEGG: rpc:RPC_0789 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 740603 4358296 RPE_0669 Rhodopseudomonas palustris BisA53 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_779607.1 737727 D 316055 CDS YP_779608.1 115522697 4358297 complement(740646..741233) 1 NC_008435.1 PFAM: transcriptional regulator PadR family protein; KEGG: bja:bll1156 transcriptional regulatory protein; PadR-like family transcriptional regulator 741233 4358297 RPE_0670 Rhodopseudomonas palustris BisA53 PadR-like family transcriptional regulator YP_779608.1 740646 R 316055 CDS YP_779609.1 115522698 4358298 741369..741794 1 NC_008435.1 KEGG: rpb:RPB_4607 hypothetical protein; hypothetical protein 741794 4358298 RPE_0671 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779609.1 741369 D 316055 CDS YP_779610.1 115522699 4358299 741917..743707 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpc:RPC_0737 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 743707 4358299 RPE_0672 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_779610.1 741917 D 316055 CDS YP_779611.1 115522700 4358300 743876..745084 1 NC_008435.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 745084 4358300 RPE_0673 Rhodopseudomonas palustris BisA53 acetyl-CoA acetyltransferase YP_779611.1 743876 D 316055 CDS YP_779612.1 115522701 4358301 745281..747497 1 NC_008435.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rpb:RPB_4604 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase 747497 4358301 RPE_0674 Rhodopseudomonas palustris BisA53 3-hydroxyacyl-CoA dehydrogenase YP_779612.1 745281 D 316055 CDS YP_779613.1 115522702 4358302 complement(747866..748480) 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rpa:RPA0820 putative glutathionine S-transferase; glutathione S-transferase 748480 4358302 RPE_0675 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_779613.1 747866 R 316055 CDS YP_779614.1 115522703 4358303 748593..749087 1 NC_008435.1 PFAM: regulatory protein, MarR; KEGG: rpc:RPC_0733 transcriptional regulator, MarR family; MarR family transcriptional regulator 749087 4358303 RPE_0676 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_779614.1 748593 D 316055 CDS YP_779615.1 115522704 4358304 749187..750557 1 NC_008435.1 TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase, GCS2; KEGG: rpc:RPC_0732 glutamate--cysteine ligase; glutamate--cysteine ligase 750557 4358304 RPE_0677 Rhodopseudomonas palustris BisA53 glutamate--cysteine ligase YP_779615.1 749187 D 316055 CDS YP_779616.1 115522705 4358305 750711..751298 1 NC_008435.1 KEGG: rpc:RPC_0731 apple; hypothetical protein 751298 4358305 RPE_0678 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779616.1 750711 D 316055 CDS YP_779617.1 115522706 4358306 751533..752945 1 NC_008435.1 PFAM: Integrase, catalytic region; KEGG: sme:SMb20905 putative transposase protein; integrase catalytic subunit 752945 4358306 RPE_0679 Rhodopseudomonas palustris BisA53 integrase catalytic subunit YP_779617.1 751533 D 316055 CDS YP_779618.1 115522707 4358307 753450..754865 1 NC_008435.1 KEGG: rfr:Rfer_1821 transcriptional regulator, XRE family; hypothetical protein 754865 4358307 RPE_0680 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779618.1 753450 D 316055 CDS YP_779619.1 115522708 4358308 complement(755665..756006) 1 NC_008435.1 KEGG: rpc:RPC_0759 hypothetical protein; hypothetical protein 756006 4358308 RPE_0681 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779619.1 755665 R 316055 CDS YP_779620.1 115522709 4358309 complement(756363..757817) 1 NC_008435.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 757817 gltD 4358309 gltD Rhodopseudomonas palustris BisA53 glutamate synthase subunit beta YP_779620.1 756363 R 316055 CDS YP_779621.1 115522710 4358310 complement(758064..762833) 1 NC_008435.1 PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rpc:RPC_0761 glutamate synthase (ferredoxin); glutamate synthase ferredoxin subunit 762833 4358310 RPE_0683 Rhodopseudomonas palustris BisA53 glutamate synthase ferredoxin subunit YP_779621.1 758064 R 316055 CDS YP_779622.1 115522711 4358608 763247..763948 1 NC_008435.1 KEGG: rpc:RPC_0762 hypothetical protein; hypothetical protein 763948 4358608 RPE_0684 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779622.1 763247 D 316055 CDS YP_779623.1 115522712 4358609 complement(764052..764522) 1 NC_008435.1 PFAM: heat shock protein Hsp20; KEGG: rpb:RPB_4533 heat shock protein HSP20; heat shock protein Hsp20 764522 4358609 RPE_0685 Rhodopseudomonas palustris BisA53 heat shock protein Hsp20 YP_779623.1 764052 R 316055 CDS YP_779624.1 115522713 4358610 764735..765682 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_0764 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 765682 4358610 RPE_0686 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_779624.1 764735 D 316055 CDS YP_779625.1 115522714 4358611 765855..766730 1 NC_008435.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bja:blr1499 UTP--glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 766730 4358611 RPE_0687 Rhodopseudomonas palustris BisA53 UTP-glucose-1-phosphate uridylyltransferase YP_779625.1 765855 D 316055 CDS YP_779626.1 115522715 4358612 complement(766763..768283) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_0766 diguanylate cyclase (GGDEF domain); diguanylate cyclase 768283 4358612 RPE_0688 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_779626.1 766763 R 316055 CDS YP_779627.1 115522716 4358613 768480..768746 1 NC_008435.1 KEGG: rpc:RPC_0767 hypothetical protein; hypothetical protein 768746 4358613 RPE_0689 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779627.1 768480 D 316055 CDS YP_779628.1 115522717 4358614 768857..769267 1 NC_008435.1 KEGG: nha:Nham_2499 ISGsu3, transposase; ISGsu3, transposase 769267 4358614 RPE_0690 Rhodopseudomonas palustris BisA53 ISGsu3, transposase YP_779628.1 768857 D 316055 CDS YP_779629.1 115522718 4358615 769677..770417 1 NC_008435.1 KEGG: mlo:mll9642 hypothetical protein; hypothetical protein 770417 4358615 RPE_0691 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779629.1 769677 D 316055 CDS YP_779630.1 115522719 4358617 771327..771725 1 NC_008435.1 KEGG: nha:Nham_3654 transposase, IS4; hypothetical protein 771725 4358617 RPE_0693 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779630.1 771327 D 316055 CDS YP_779631.1 115522720 4358618 complement(771722..772741) 1 NC_008435.1 KEGG: rpd:RPD_0866 hypothetical protein; hypothetical protein 772741 4358618 RPE_0694 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779631.1 771722 R 316055 CDS YP_779632.1 115522721 4358619 complement(772847..774535) 1 NC_008435.1 KEGG: rpc:RPC_0768 hypothetical protein; hypothetical protein 774535 4358619 RPE_0695 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779632.1 772847 R 316055 CDS YP_779633.1 115522722 4358620 774749..775762 1 NC_008435.1 KEGG: rpc:RPC_0769 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 775762 4358620 RPE_0696 Rhodopseudomonas palustris BisA53 KpsF/GutQ family protein YP_779633.1 774749 D 316055 CDS YP_779634.1 115522723 4358621 complement(775980..777350) 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpd:RPD_0083 major facilitator superfamily MFS_1; major facilitator transporter 777350 4358621 RPE_0697 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_779634.1 775980 R 316055 CDS YP_779635.1 115522724 4358622 complement(777406..779058) 1 NC_008435.1 KEGG: rpc:RPC_0771 hypothetical protein; hypothetical protein 779058 4358622 RPE_0698 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779635.1 777406 R 316055 CDS YP_779636.1 115522725 4358623 complement(779209..779784) 1 NC_008435.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rpb:RPB_1983 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 779784 4358623 RPE_0699 Rhodopseudomonas palustris BisA53 filamentation induced by cAMP protein fic YP_779636.1 779209 R 316055 CDS YP_779637.1 115522726 4358624 complement(779796..780011) 1 NC_008435.1 hypothetical protein 780011 4358624 RPE_0700 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779637.1 779796 R 316055 CDS YP_779638.1 115522727 4359698 complement(780050..781453) 1 NC_008435.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_0775 lytic murein transglycosylase; lytic murein transglycosylase 781453 4359698 RPE_0701 Rhodopseudomonas palustris BisA53 lytic murein transglycosylase YP_779638.1 780050 R 316055 CDS YP_779639.1 115522728 4359699 781573..782202 1 NC_008435.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rpc:RPC_0776 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 782202 4359699 RPE_0702 Rhodopseudomonas palustris BisA53 lysine exporter protein LysE/YggA YP_779639.1 781573 D 316055 CDS YP_779640.1 115522729 4359700 complement(782206..782955) 1 NC_008435.1 PFAM: protein of unknown function DUF81; KEGG: rpb:RPB_4519 protein of unknown function DUF81; hypothetical protein 782955 4359700 RPE_0703 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779640.1 782206 R 316055 CDS YP_779641.1 115522730 4359701 complement(783003..783434) 1 NC_008435.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpd:RPD_4360 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 783434 4359701 RPE_0704 Rhodopseudomonas palustris BisA53 glyoxalase/bleomycin resistance protein/dioxygenase YP_779641.1 783003 R 316055 CDS YP_779642.1 115522731 4359702 783499..784089 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpd:RPD_4359 regulatory protein, TetR; TetR family transcriptional regulator 784089 4359702 RPE_0705 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_779642.1 783499 D 316055 CDS YP_779643.1 115522732 4359703 complement(784109..784888) 1 NC_008435.1 TIGRFAM: histidinol-phosphate phosphatase, putative; PFAM: inositol monophosphatase; KEGG: rpd:RPD_4358 histidinol-phosphate phosphatase, putative, inositol monophosphatase; histidinol-phosphate phosphatase 784888 4359703 RPE_0706 Rhodopseudomonas palustris BisA53 histidinol-phosphate phosphatase YP_779643.1 784109 R 316055 CDS YP_779644.1 115522733 4359704 complement(785437..786324) 1 NC_008435.1 PFAM: N-formylglutamate amidohydrolase; KEGG: rpc:RPC_0780 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 786324 4359704 RPE_0707 Rhodopseudomonas palustris BisA53 N-formylglutamate amidohydrolase YP_779644.1 785437 R 316055 CDS YP_779645.1 115522734 4359705 786618..786977 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_0781 response regulator receiver domain protein (CheY-like); response regulator receiver protein 786977 4359705 RPE_0708 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_779645.1 786618 D 316055 CDS YP_779646.1 115522735 4359707 787291..788079 1 NC_008435.1 KEGG: rpc:RPC_0782 hypothetical protein; hypothetical protein 788079 4359707 RPE_0709 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779646.1 787291 D 316055 CDS YP_779647.1 115522736 4359708 complement(788449..789048) 1 NC_008435.1 stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 789048 4359708 RPE_0710 Rhodopseudomonas palustris BisA53 TrpR binding protein WrbA YP_779647.1 788449 R 316055 CDS YP_779648.1 115522737 4359709 complement(789209..789907) 1 NC_008435.1 PFAM: Pirin domain protein domain protein; KEGG: rpd:RPD_4351 pirin-like; pirin domain-containing protein 789907 4359709 RPE_0711 Rhodopseudomonas palustris BisA53 pirin domain-containing protein YP_779648.1 789209 R 316055 CDS YP_779649.1 115522738 4359710 790025..790948 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpa:RPA0911 transcriptional regulator, LysR family; LysR family transcriptional regulator 790948 4359710 RPE_0712 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_779649.1 790025 D 316055 CDS YP_779650.1 115522739 4359711 complement(790935..791786) 1 NC_008435.1 KEGG: rpc:RPC_0787 hypothetical protein; hypothetical protein 791786 4359711 RPE_0713 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779650.1 790935 R 316055 CDS YP_779651.1 115522740 4359712 791912..792541 1 NC_008435.1 PFAM: protein of unknown function DUF179; KEGG: rpc:RPC_0788 protein of unknown function DUF179; hypothetical protein 792541 4359712 RPE_0714 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779651.1 791912 D 316055 CDS YP_779652.1 115522741 4359713 792963..796250 1 NC_008435.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpc:RPC_0738 Sel1; Sel1 domain-containing protein 796250 4359713 RPE_0715 Rhodopseudomonas palustris BisA53 Sel1 domain-containing protein YP_779652.1 792963 D 316055 CDS YP_779653.1 115522742 4359714 796419..797345 1 NC_008435.1 PFAM: protein of unknown function DUF81; KEGG: rpc:RPC_0741 protein of unknown function DUF81; hypothetical protein 797345 4359714 RPE_0716 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779653.1 796419 D 316055 CDS YP_779654.1 115522743 4358190 797342..798133 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_0742 hypothetical protein; hypothetical protein 798133 4358190 RPE_0717 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779654.1 797342 D 316055 CDS YP_779655.1 115522744 4358191 complement(798270..799031) 1 NC_008435.1 PFAM: carbonic anhydrase; KEGG: rpc:RPC_0758 carbonate dehydratase; carbonate dehydratase 799031 4358191 RPE_0718 Rhodopseudomonas palustris BisA53 carbonate dehydratase YP_779655.1 798270 R 316055 CDS YP_779656.1 115522745 4358192 complement(799127..799753) 1 NC_008435.1 PFAM: peptidase S24, S26A and S26B; KEGG: rpc:RPC_0757 putative phage repressor; putative phage repressor 799753 4358192 RPE_0719 Rhodopseudomonas palustris BisA53 putative phage repressor YP_779656.1 799127 R 316055 CDS YP_779657.1 115522746 4358193 800073..800417 1 NC_008435.1 PFAM: protein of unknown function DUF952; KEGG: rpc:RPC_0756 protein of unknown function DUF952; hypothetical protein 800417 4358193 RPE_0720 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779657.1 800073 D 316055 CDS YP_779658.1 115522747 4358194 800414..801508 1 NC_008435.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 801508 4358194 RPE_0721 Rhodopseudomonas palustris BisA53 dihydroorotate dehydrogenase 2 YP_779658.1 800414 D 316055 CDS YP_779659.1 115522748 4358195 complement(801860..802594) 1 NC_008435.1 PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_0754 beta-lactamase-like; beta-lactamase domain-containing protein 802594 4358195 RPE_0722 Rhodopseudomonas palustris BisA53 beta-lactamase domain-containing protein YP_779659.1 801860 R 316055 CDS YP_779660.1 115522749 4358196 complement(802636..803976) 1 NC_008435.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rpd:RPD_0791 MATE efflux family protein; MATE efflux family protein 803976 4358196 RPE_0723 Rhodopseudomonas palustris BisA53 MATE efflux family protein YP_779660.1 802636 R 316055 CDS YP_779661.1 115522750 4358197 complement(803996..804295) 1 NC_008435.1 KEGG: rpc:RPC_0752 hypothetical protein; hypothetical protein 804295 4358197 RPE_0724 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779661.1 803996 R 316055 CDS YP_779662.1 115522751 4358198 complement(804532..806295) 1 NC_008435.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 806295 4358198 RPE_0725 Rhodopseudomonas palustris BisA53 ATP-dependent DNA ligase YP_779662.1 804532 R 316055 CDS YP_779663.1 115522752 4358199 complement(806292..807332) 1 NC_008435.1 KEGG: rpc:RPC_0750 putative mRNA 3-end processing factor; putative mRNA 3-end processing factor 807332 4358199 RPE_0726 Rhodopseudomonas palustris BisA53 putative mRNA 3-end processing factor YP_779663.1 806292 R 316055 CDS YP_779664.1 115522753 4358200 807404..808330 1 NC_008435.1 PFAM: Tetratricopeptide TPR_2 repeat protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_0749 tetratricopeptide TPR_2; type 11 methyltransferase 808330 4358200 RPE_0727 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_779664.1 807404 D 316055 CDS YP_779665.1 115522754 4358201 complement(808414..809754) 1 NC_008435.1 PFAM: porin; KEGG: rpc:RPC_0748 putative outer membrane protein; porin 809754 4358201 RPE_0728 Rhodopseudomonas palustris BisA53 porin YP_779665.1 808414 R 316055 CDS YP_779666.1 115522755 4358202 810088..811308 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_0796 extracellular ligand-binding receptor; extracellular ligand-binding receptor 811308 4358202 RPE_0729 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_779666.1 810088 D 316055 CDS YP_779667.1 115522756 4358203 811837..814251 1 NC_008435.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; KEGG: rpc:RPC_0747 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 814251 4358203 RPE_0730 Rhodopseudomonas palustris BisA53 DEAD/DEAH box helicase YP_779667.1 811837 D 316055 CDS YP_779668.1 115522757 4358204 814254..814967 1 NC_008435.1 KEGG: rpc:RPC_0746 hypothetical protein; hypothetical protein 814967 4358204 RPE_0731 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779668.1 814254 D 316055 CDS YP_779669.1 115522758 4358205 complement(815142..816059) 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpa:RPA0809 transcriptional regulator, LysR family; LysR family transcriptional regulator 816059 4358205 RPE_0732 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_779669.1 815142 R 316055 CDS YP_779670.1 115522759 4358206 816122..817048 1 NC_008435.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_0744 protein of unknown function DUF6, transmembrane; hypothetical protein 817048 4358206 RPE_0733 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779670.1 816122 D 316055 CDS YP_779671.1 115522760 4358346 817058..817843 1 NC_008435.1 KEGG: rpc:RPC_0743 hypothetical protein; hypothetical protein 817843 4358346 RPE_0734 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779671.1 817058 D 316055 CDS YP_779672.1 115522761 4358347 complement(817964..818230) 1 NC_008435.1 KEGG: rpd:RPD_1001 hypothetical protein; hypothetical protein 818230 4358347 RPE_0735 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779672.1 817964 R 316055 CDS YP_779673.1 115522762 4358348 complement(818529..820169) 1 NC_008435.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 820169 lysK 4358348 lysK Rhodopseudomonas palustris BisA53 lysyl-tRNA synthetase YP_779673.1 818529 R 316055 CDS YP_779674.1 115522763 4358349 complement(820211..821134) 1 NC_008435.1 PFAM: extracellular solute-binding protein, family 3; KEGG: rpc:RPC_0729 extracellular solute-binding protein, family 3; extracellular solute-binding protein 821134 4358349 RPE_0737 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_779674.1 820211 R 316055 CDS YP_779675.1 115522764 4358350 821213..823153 1 NC_008435.1 PFAM: glycosyl transferase, family 2; KEGG: rpb:RPB_0886 glycosyl transferases; glycosyl transferase family protein 823153 4358350 RPE_0738 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_779675.1 821213 D 316055 CDS YP_779676.1 115522765 4358351 complement(823137..823730) 1 NC_008435.1 PFAM: electron transport protein SCO1/SenC; KEGG: rpc:RPC_0721 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 823730 4358351 RPE_0739 Rhodopseudomonas palustris BisA53 electron transport protein SCO1/SenC YP_779676.1 823137 R 316055 CDS YP_779677.1 115522766 4358352 complement(823863..824321) 1 NC_008435.1 KEGG: rpc:RPC_0720 hypothetical protein; hypothetical protein 824321 4358352 RPE_0740 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779677.1 823863 R 316055 CDS YP_779678.1 115522767 4358353 824859..825233 1 NC_008435.1 KEGG: rpc:RPC_0718 hypothetical protein; hypothetical protein 825233 4358353 RPE_0741 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779678.1 824859 D 316055 CDS YP_779679.1 115522768 4358354 825502..826617 1 NC_008435.1 catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 826617 4358354 RPE_0742 Rhodopseudomonas palustris BisA53 3-oxoacyl-ACP synthase YP_779679.1 825502 D 316055 CDS YP_779680.1 115522769 4358355 complement(826639..827208) 1 NC_008435.1 KEGG: nha:Nham_0216 hypothetical protein; hypothetical protein 827208 4358355 RPE_0743 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779680.1 826639 R 316055 CDS YP_779681.1 115522770 4358356 827420..828322 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpb:RPB_0879 transcriptional regulator, LysR family; LysR family transcriptional regulator 828322 4358356 RPE_0744 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_779681.1 827420 D 316055 CDS YP_779682.1 115522771 4358357 828578..829693 1 NC_008435.1 PFAM: protein of unknown function DUF453; KEGG: rpb:RPB_0878 protein of unknown function DUF453; hypothetical protein 829693 4358357 RPE_0745 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779682.1 828578 D 316055 CDS YP_779683.1 115522772 4358358 829690..830718 1 NC_008435.1 PFAM: amidohydrolase 2; KEGG: rpb:RPB_0877 amidohydrolase 2; amidohydrolase 2 830718 4358358 RPE_0746 Rhodopseudomonas palustris BisA53 amidohydrolase 2 YP_779683.1 829690 D 316055 CDS YP_779684.1 115522773 4358359 830721..831416 1 NC_008435.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rpb:RPB_0876 dimethylmenaquinone methyltransferase; hypothetical protein 831416 4358359 RPE_0747 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779684.1 830721 D 316055 CDS YP_779685.1 115522774 4358360 831422..832351 1 NC_008435.1 KEGG: rpa:RPA4699 possible dehydrogenase; putative dehydrogenase 832351 4358360 RPE_0748 Rhodopseudomonas palustris BisA53 putative dehydrogenase YP_779685.1 831422 D 316055 CDS YP_779686.1 115522775 4358361 832578..833492 1 NC_008435.1 PFAM: amidohydrolase 2; KEGG: rpb:RPB_0874 amidohydrolase 2; amidohydrolase 2 833492 4358361 RPE_0749 Rhodopseudomonas palustris BisA53 amidohydrolase 2 YP_779686.1 832578 D 316055 CDS YP_779687.1 115522776 4358362 833722..834111 1 NC_008435.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit alpha 834111 4358362 RPE_0750 Rhodopseudomonas palustris BisA53 protocatechuate 4,5-dioxygenase subunit alpha YP_779687.1 833722 D 316055 CDS YP_779688.1 115522777 4358363 834111..834965 1 NC_008435.1 extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; protocatechuate 4,5-dioxygenase subunit beta 834965 4358363 RPE_0751 Rhodopseudomonas palustris BisA53 protocatechuate 4,5-dioxygenase subunit beta YP_779688.1 834111 D 316055 CDS YP_779689.1 115522778 4357844 834967..835923 1 NC_008435.1 PFAM: oxidoreductase domain protein; KEGG: rpa:RPA4703 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase; oxidoreductase domain-containing protein 835923 4357844 RPE_0752 Rhodopseudomonas palustris BisA53 oxidoreductase domain-containing protein YP_779689.1 834967 D 316055 CDS YP_779690.1 115522779 4357845 836020..836400 1 NC_008435.1 KEGG: rpc:RPC_0717 hypothetical protein; hypothetical protein 836400 4357845 RPE_0753 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779690.1 836020 D 316055 CDS YP_779691.1 115522780 4357846 836544..836945 1 NC_008435.1 PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: rpc:RPC_0716 phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase 836945 4357846 RPE_0754 Rhodopseudomonas palustris BisA53 phosphoribosyl-ATP pyrophosphohydrolase YP_779691.1 836544 D 316055 CDS YP_779692.1 115522781 4357847 836970..837587 1 NC_008435.1 KEGG: rpa:RPA4706 DedA family; DedA family protein 837587 4357847 RPE_0755 Rhodopseudomonas palustris BisA53 DedA family protein YP_779692.1 836970 D 316055 CDS YP_779693.1 115522782 4357848 837643..838296 1 NC_008435.1 KEGG: rpc:RPC_0714 hypothetical protein; hypothetical protein 838296 4357848 RPE_0756 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779693.1 837643 D 316055 CDS YP_779694.1 115522783 4357849 838448..839416 1 NC_008435.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: rpd:RPD_0976 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 839416 4357849 RPE_0757 Rhodopseudomonas palustris BisA53 2-nitropropane dioxygenase YP_779694.1 838448 D 316055 CDS YP_779695.1 115522784 4357850 839425..840198 1 NC_008435.1 KEGG: rpc:RPC_0712 hypothetical protein; hypothetical protein 840198 4357850 RPE_0758 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779695.1 839425 D 316055 CDS YP_779696.1 115522785 4357851 840314..840571 1 NC_008435.1 KEGG: rpc:RPC_0711 hypothetical protein; hypothetical protein 840571 4357851 RPE_0759 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779696.1 840314 D 316055 CDS YP_779697.1 115522786 4357852 840755..841468 1 NC_008435.1 KEGG: rpc:RPC_0710 hypothetical protein; hypothetical protein 841468 4357852 RPE_0760 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779697.1 840755 D 316055 CDS YP_779698.1 115522787 4357853 841626..842546 1 NC_008435.1 KEGG: rpc:RPC_0709 hypothetical protein; hypothetical protein 842546 4357853 RPE_0761 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779698.1 841626 D 316055 CDS YP_779699.1 115522788 4357854 complement(842568..843677) 1 NC_008435.1 KEGG: rpc:RPC_0708 molybdate ABC transporter, ATP-binding protein; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase; molybdate ABC transporter ATP-binding protein 843677 4357854 RPE_0762 Rhodopseudomonas palustris BisA53 molybdate ABC transporter ATP-binding protein YP_779699.1 842568 R 316055 CDS YP_779700.1 115522789 4357855 complement(843674..844360) 1 NC_008435.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_0707 molybdate ABC transporter, permease protein; molybdate ABC transporter permease 844360 4357855 RPE_0763 Rhodopseudomonas palustris BisA53 molybdate ABC transporter permease YP_779700.1 843674 R 316055 CDS YP_779701.1 115522790 4357856 complement(844552..845325) 1 NC_008435.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rpa:RPA4717 molybdate transport system substrate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 845325 4357856 RPE_0764 Rhodopseudomonas palustris BisA53 molybdenum ABC transporter periplasmic molybdate-binding protein YP_779701.1 844552 R 316055 CDS YP_779702.1 115522791 4357857 complement(845341..846132) 1 NC_008435.1 TIGRFAM: molybdate transport repressor, ModE; Molybdenum-pterin binding; PFAM: regulatory protein, LysR; TOBE domain protein; KEGG: rpc:RPC_0705 transcriptional regulator, ModE family; ModE family transcriptional regulator 846132 4357857 RPE_0765 Rhodopseudomonas palustris BisA53 ModE family transcriptional regulator YP_779702.1 845341 R 316055 CDS YP_779703.1 115522792 4357858 846515..851584 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rpc:RPC_0704 pyruvate flavodoxin/ferredoxin oxidoreductase-like; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 851584 4357858 RPE_0766 Rhodopseudomonas palustris BisA53 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_779703.1 846515 D 316055 CDS YP_779704.1 115522793 4357859 851581..854418 1 NC_008435.1 undetermined function; putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase 854418 4357859 RPE_0767 Rhodopseudomonas palustris BisA53 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase YP_779704.1 851581 D 316055 CDS YP_779705.1 115522794 4357860 complement(854576..855226) 1 NC_008435.1 PFAM: Collagen triple helix repeat; KEGG: rpb:RPB_1937 collagen triple helix repeat; triple helix repeat-containing collagen 855226 4357860 RPE_0768 Rhodopseudomonas palustris BisA53 triple helix repeat-containing collagen YP_779705.1 854576 R 316055 CDS YP_779706.1 115522795 4358850 855398..856369 1 NC_008435.1 PFAM: PfkB domain protein; KEGG: rpc:RPC_0700 PfkB; ribokinase-like domain-containing protein 856369 4358850 RPE_0769 Rhodopseudomonas palustris BisA53 ribokinase-like domain-containing protein YP_779706.1 855398 D 316055 CDS YP_779707.1 115522796 4358851 856573..857937 1 NC_008435.1 catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta 857937 4358851 RPE_0770 Rhodopseudomonas palustris BisA53 tryptophan synthase subunit beta YP_779707.1 856573 D 316055 CDS YP_779708.1 115522797 4358852 858216..860909 1 NC_008435.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bja:blr6465 putative steroid monooxygenase; alpha/beta hydrolase domain-containing protein 860909 4358852 RPE_0771 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase domain-containing protein YP_779708.1 858216 D 316055 CDS YP_779709.1 115522798 4358858 complement(867337..868248) 1 NC_008435.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 868248 flgL 4358858 flgL Rhodopseudomonas palustris BisA53 flagellar hook-associated protein FlgL YP_779709.1 867337 R 316055 CDS YP_779710.1 115522799 4358859 complement(868262..870031) 1 NC_008435.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rpc:RPC_0874 flagellar hook-associated protein; flagellar hook-associated protein FlgK 870031 4358859 RPE_0774 Rhodopseudomonas palustris BisA53 flagellar hook-associated protein FlgK YP_779710.1 868262 R 316055 CDS YP_779711.1 115522800 4358860 complement(870051..870506) 1 NC_008435.1 KEGG: rpc:RPC_0873 hypothetical protein; hypothetical protein 870506 4358860 RPE_0775 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779711.1 870051 R 316055 CDS YP_779712.1 115522801 4358861 complement(870508..870789) 1 NC_008435.1 KEGG: rpc:RPC_0872 hypothetical protein; hypothetical protein 870789 4358861 RPE_0776 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779712.1 870508 R 316055 CDS YP_779713.1 115522802 4358862 complement(870793..872058) 1 NC_008435.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 872058 flgE 4358862 flgE Rhodopseudomonas palustris BisA53 flagellar hook protein FlgE YP_779713.1 870793 R 316055 CDS YP_779714.1 115522803 4358863 complement(872078..872743) 1 NC_008435.1 PFAM: flagellar hook capping protein; KEGG: rpc:RPC_0870 flagellar hook capping protein; flagellar hook capping protein 872743 4358863 RPE_0778 Rhodopseudomonas palustris BisA53 flagellar hook capping protein YP_779714.1 872078 R 316055 CDS YP_779715.1 115522804 4358864 complement(872996..873337) 1 NC_008435.1 KEGG: rpb:RPB_0763 hypothetical protein; hypothetical protein 873337 4358864 RPE_0779 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779715.1 872996 R 316055 CDS YP_779716.1 115522805 4358865 complement(873453..873857) 1 NC_008435.1 KEGG: rpc:RPC_0868 flagellar protein FliS; flagellar protein FliS 873857 4358865 RPE_0780 Rhodopseudomonas palustris BisA53 flagellar protein FliS YP_779716.1 873453 R 316055 CDS YP_779717.1 115522806 4358866 complement(873860..875563) 1 NC_008435.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: rpc:RPC_0867 flagellar hook-associated 2-like; flagellar hook-associated 2 domain-containing protein 875563 4358866 RPE_0781 Rhodopseudomonas palustris BisA53 flagellar hook-associated 2 domain-containing protein YP_779717.1 873860 R 316055 CDS YP_779718.1 115522807 4358867 complement(875630..876460) 1 NC_008435.1 PFAM: flagellin domain protein; KEGG: rpc:RPC_0866 flagellin-like; flagellin domain-containing protein 876460 4358867 RPE_0782 Rhodopseudomonas palustris BisA53 flagellin domain-containing protein YP_779718.1 875630 R 316055 CDS YP_779719.1 115522808 4358868 complement(876605..877288) 1 NC_008435.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 877288 4358868 RPE_0783 Rhodopseudomonas palustris BisA53 RNA polymerase sigma factor YP_779719.1 876605 R 316055 CDS YP_779720.1 115522809 4358869 877602..877856 1 NC_008435.1 hypothetical protein 877856 4358869 RPE_0784 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779720.1 877602 D 316055 CDS YP_779721.1 115522810 4358870 877931..879355 1 NC_008435.1 KEGG: rpc:RPC_0863 hypothetical protein; hypothetical protein 879355 4358870 RPE_0785 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779721.1 877931 D 316055 CDS YP_779722.1 115522811 4358872 879886..880443 1 NC_008435.1 PFAM: Disulphide bond formation protein DsbB; KEGG: rpc:RPC_0627 disulphide bond formation protein DsbB; hypothetical protein 880443 4358872 RPE_0786 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779722.1 879886 D 316055 CDS YP_779723.1 115522812 4358873 880689..881207 1 NC_008435.1 KEGG: rpc:RPC_0625 hypothetical protein; hypothetical protein 881207 4358873 RPE_0787 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779723.1 880689 D 316055 CDS YP_779724.1 115522813 4358874 881245..881628 1 NC_008435.1 PFAM: LrgA family protein; KEGG: rpc:RPC_0624 LrgA; LrgA family protein 881628 4358874 RPE_0788 Rhodopseudomonas palustris BisA53 LrgA family protein YP_779724.1 881245 D 316055 CDS YP_779725.1 115522814 4358875 881625..882347 1 NC_008435.1 PFAM: LrgB family protein; KEGG: rpa:RPA0545 hypothetical protein; LrgB-like protein 882347 4358875 RPE_0789 Rhodopseudomonas palustris BisA53 LrgB-like protein YP_779725.1 881625 D 316055 CDS YP_779726.1 115522815 4358876 882466..883140 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: DSBA oxidoreductase; KEGG: rpc:RPC_0622 twin-arginine translocation pathway signal; hypothetical protein 883140 4358876 RPE_0790 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779726.1 882466 D 316055 CDS YP_779727.1 115522816 4358877 complement(883181..883399) 1 NC_008435.1 KEGG: rpc:RPC_0621 hypothetical protein; hypothetical protein 883399 4358877 RPE_0791 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779727.1 883181 R 316055 CDS YP_779728.1 115522817 4358878 883535..884029 1 NC_008435.1 KEGG: rpd:RPD_0334 hypothetical protein; hypothetical protein 884029 4358878 RPE_0792 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779728.1 883535 D 316055 CDS YP_779729.1 115522818 4359610 884050..885117 1 NC_008435.1 PFAM: protein of unknown function UPF0118; KEGG: rpc:RPC_2083 protein of unknown function UPF0118; hypothetical protein 885117 4359610 RPE_0793 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779729.1 884050 D 316055 CDS YP_779730.1 115522819 4359611 complement(885135..885791) 1 NC_008435.1 TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: rpb:RPB_0487 anti-sigm factor, ChrR; anti-ECFsigma factor ChrR 885791 4359611 RPE_0794 Rhodopseudomonas palustris BisA53 anti-ECFsigma factor ChrR YP_779730.1 885135 R 316055 CDS YP_779731.1 115522820 4359612 complement(885788..886384) 1 NC_008435.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 886384 4359612 RPE_0795 Rhodopseudomonas palustris BisA53 RNA polymerase sigma factor RpoE YP_779731.1 885788 R 316055 CDS YP_779732.1 115522821 4359613 complement(886564..887166) 1 NC_008435.1 PFAM: GTP cyclohydrolase I; KEGG: mag:amb4223 GTP cyclohydrolase I; GTP cyclohydrolase I 887166 4359613 RPE_0796 Rhodopseudomonas palustris BisA53 GTP cyclohydrolase I YP_779732.1 886564 R 316055 CDS YP_779733.1 115522822 4359614 887876..889156 1 NC_008435.1 KEGG: rpc:RPC_1052 citrate transporter; citrate transporter 889156 4359614 RPE_0797 Rhodopseudomonas palustris BisA53 citrate transporter YP_779733.1 887876 D 316055 CDS YP_779734.1 115522823 4359615 complement(889445..890527) 1 NC_008435.1 KEGG: rru:Rru_A1257 hypothetical protein; hypothetical protein 890527 4359615 RPE_0798 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779734.1 889445 R 316055 CDS YP_779735.1 115522824 4359616 complement(890568..891125) 1 NC_008435.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rpc:RPC_0613 HNH endonuclease; HNH endonuclease 891125 4359616 RPE_0799 Rhodopseudomonas palustris BisA53 HNH endonuclease YP_779735.1 890568 R 316055 CDS YP_779736.1 115522825 4359617 complement(891310..892779) 1 NC_008435.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 892779 4359617 RPE_0800 Rhodopseudomonas palustris BisA53 glycogen synthase YP_779736.1 891310 R 316055 CDS YP_779737.1 115522826 4359618 complement(892776..894038) 1 NC_008435.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 894038 glgC 4359618 glgC Rhodopseudomonas palustris BisA53 glucose-1-phosphate adenylyltransferase YP_779737.1 892776 R 316055 CDS YP_779738.1 115522827 4359619 894137..894397 1 NC_008435.1 hypothetical protein 894397 4359619 RPE_0802 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779738.1 894137 D 316055 CDS YP_779739.1 115522828 4359620 complement(894414..895403) 1 NC_008435.1 PFAM: CBS domain containing protein; KEGG: rpc:RPC_0610 putative signal-transduction protein with CBS domains; signal-transduction protein 895403 4359620 RPE_0803 Rhodopseudomonas palustris BisA53 signal-transduction protein YP_779739.1 894414 R 316055 CDS YP_779740.1 115522829 4359621 complement(895679..897238) 1 NC_008435.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: rpd:RPD_0322 acetyl-CoA hydrolase; acetyl-CoA hydrolase 897238 4359621 RPE_0804 Rhodopseudomonas palustris BisA53 acetyl-CoA hydrolase YP_779740.1 895679 R 316055 CDS YP_779741.1 115522830 4359622 complement(897557..898531) 1 NC_008435.1 KEGG: rpc:RPC_2939 alpha/beta hydrolase fold; hypothetical protein 898531 4359622 RPE_0805 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779741.1 897557 R 316055 CDS YP_779742.1 115522831 4359623 899057..900220 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: atc:AGR_L_3095 hypothetical protein; group 1 glycosyl transferase 900220 4359623 RPE_0806 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_779742.1 899057 D 316055 CDS YP_779743.1 115522832 4359624 900284..902530 1 NC_008435.1 PFAM: lipopolysaccharide biosynthesis; KEGG: rru:Rru_A1490 protein-tyrosine kinase; lipopolysaccharide biosynthesis 902530 4359624 RPE_0807 Rhodopseudomonas palustris BisA53 lipopolysaccharide biosynthesis YP_779743.1 900284 D 316055 CDS YP_779744.1 115522833 4359625 902530..903684 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: ana:alr3699 similar to glycosyltransferase; group 1 glycosyl transferase 903684 4359625 RPE_0808 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_779744.1 902530 D 316055 CDS YP_779745.1 115522834 4359626 903739..904761 1 NC_008435.1 PFAM: polysaccharide deacetylase; KEGG: bja:bll1083 hypothetical protein; polysaccharide deacetylase 904761 4359626 RPE_0809 Rhodopseudomonas palustris BisA53 polysaccharide deacetylase YP_779745.1 903739 D 316055 CDS YP_779746.1 115522835 4359627 904754..905908 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: ava:Ava_1365 glycosyl transferase, group 1; group 1 glycosyl transferase 905908 4359627 RPE_0810 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_779746.1 904754 D 316055 CDS YP_779747.1 115522836 4358968 906154..907185 1 NC_008435.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cte:CT0759 hypothetical protein; type 11 methyltransferase 907185 4358968 RPE_0811 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_779747.1 906154 D 316055 CDS YP_779748.1 115522837 4358969 907250..908680 1 NC_008435.1 PFAM: polysaccharide biosynthesis protein; KEGG: mlo:mll5270 probable succinoglycan transport protein; polysaccharide biosynthesis protein 908680 4358969 RPE_0812 Rhodopseudomonas palustris BisA53 polysaccharide biosynthesis protein YP_779748.1 907250 D 316055 CDS YP_779749.1 115522838 4358970 complement(908720..909913) 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: cvi:CV0817 probable glycosyltransferase; group 1 glycosyl transferase 909913 4358970 RPE_0813 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_779749.1 908720 R 316055 CDS YP_779750.1 115522839 4358971 909983..911299 1 NC_008435.1 hypothetical protein 911299 4358971 RPE_0814 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779750.1 909983 D 316055 CDS YP_779751.1 115522840 4358972 911442..911822 1 NC_008435.1 KEGG: bja:blr7300 hypothetical protein; hypothetical protein 911822 4358972 RPE_0815 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779751.1 911442 D 316055 CDS YP_779752.1 115522841 4358974 complement(912085..912420) 1 NC_008435.1 KEGG: rpb:RPB_0453 hypothetical protein; hypothetical protein 912420 4358974 RPE_0816 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779752.1 912085 R 316055 CDS YP_779753.1 115522842 4358975 912464..913447 1 NC_008435.1 KEGG: rpc:RPC_0606 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 913447 4358975 RPE_0817 Rhodopseudomonas palustris BisA53 RluA family pseudouridine synthase YP_779753.1 912464 D 316055 CDS YP_779754.1 115522843 4358976 913665..914564 1 NC_008435.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 914564 4358976 RPE_0818 Rhodopseudomonas palustris BisA53 RNA polymerase factor sigma-32 YP_779754.1 913665 D 316055 CDS YP_779755.1 115522844 4358977 complement(914762..916375) 1 NC_008435.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 916375 4358977 RPE_0819 Rhodopseudomonas palustris BisA53 phosphoenolpyruvate carboxykinase YP_779755.1 914762 R 316055 CDS YP_779756.1 115522845 4358978 complement(916567..917304) 1 NC_008435.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: rpc:RPC_0598 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 917304 4358978 RPE_0820 Rhodopseudomonas palustris BisA53 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_779756.1 916567 R 316055 CDS YP_779757.1 115522846 4358979 917504..918205 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpd:RPD_0367 response regulator receiver; two component transcriptional regulator 918205 4358979 RPE_0821 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_779757.1 917504 D 316055 CDS YP_779758.1 115522847 4358980 918272..920131 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_0596 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase 920131 4358980 RPE_0822 Rhodopseudomonas palustris BisA53 sensor signal transduction histidine kinase YP_779758.1 918272 D 316055 CDS YP_779759.1 115522848 4358981 920128..920598 1 NC_008435.1 KEGG: rpc:RPC_0595 HPr kinase; HPr kinase 920598 4358981 RPE_0823 Rhodopseudomonas palustris BisA53 HPr kinase YP_779759.1 920128 D 316055 CDS YP_779760.1 115522849 4358982 920786..921187 1 NC_008435.1 PFAM: PTS system fructose subfamily IIA component; KEGG: rpd:RPD_0370 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 921187 4358982 RPE_0824 Rhodopseudomonas palustris BisA53 PTS system fructose subfamily transporter subunit IIA YP_779760.1 920786 D 316055 CDS YP_779761.1 115522850 4358983 921220..921519 1 NC_008435.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: rpc:RPC_0593 HPrNtr; HPr family phosphocarrier protein 921519 4358983 RPE_0825 Rhodopseudomonas palustris BisA53 HPr family phosphocarrier protein YP_779761.1 921220 D 316055 CDS YP_779762.1 115522851 4360183 complement(921516..923051) 1 NC_008435.1 KEGG: rpc:RPC_0592 hypothetical protein; hypothetical protein 923051 4360183 RPE_0826 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779762.1 921516 R 316055 CDS YP_779763.1 115522852 4360184 923164..924975 1 NC_008435.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 924975 4360184 RPE_0827 Rhodopseudomonas palustris BisA53 GTP-binding protein LepA YP_779763.1 923164 D 316055 CDS YP_779764.1 115522853 4360185 complement(925139..925438) 1 NC_008435.1 hypothetical protein 925438 4360185 RPE_0828 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779764.1 925139 R 316055 CDS YP_779765.1 115522854 4360186 925700..925936 1 NC_008435.1 KEGG: rpc:RPC_0587 hypothetical protein; hypothetical protein 925936 4360186 RPE_0829 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779765.1 925700 D 316055 CDS YP_779766.1 115522855 4360187 925923..926912 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA0348 possible hydrolase; alpha/beta hydrolase fold protein 926912 4360187 RPE_0830 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_779766.1 925923 D 316055 CDS YP_779767.1 115522856 4360188 927666..929564 1 NC_008435.1 TIGRFAM: cytochrome C family protein; KEGG: rpc:RPC_2960 cytochrome; cytochrome C family protein 929564 4360188 RPE_0831 Rhodopseudomonas palustris BisA53 cytochrome C family protein YP_779767.1 927666 D 316055 CDS YP_779768.1 115522857 4360189 929671..932052 1 NC_008435.1 KEGG: rpc:RPC_2959 putative outer membrane protein precursor; putative outer membrane protein 932052 4360189 RPE_0832 Rhodopseudomonas palustris BisA53 putative outer membrane protein YP_779768.1 929671 D 316055 CDS YP_779769.1 115522858 4360190 932212..932493 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_2958 twin-arginine translocation pathway signal; hypothetical protein 932493 4360190 RPE_0833 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779769.1 932212 D 316055 CDS YP_779770.1 115522859 4360191 932951..933778 1 NC_008435.1 PFAM: porin; KEGG: rpa:RPA2815 possible outer membrane protein; porin 933778 4360191 RPE_0834 Rhodopseudomonas palustris BisA53 porin YP_779770.1 932951 D 316055 CDS YP_779771.1 115522860 4360192 934094..936178 1 NC_008435.1 PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpd:RPD_3218 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 936178 4360192 RPE_0835 Rhodopseudomonas palustris BisA53 DEAD/DEAH box helicase YP_779771.1 934094 D 316055 CDS YP_779772.1 115522861 4360193 complement(936329..937213) 1 NC_008435.1 KEGG: rpc:RPC_0877 ADP-ribosyl-(dinitrogen reductase) hydrolase; TIGRFAM: ADP-ribosyl-[dinitrogen reductase] hydrolase; PFAM: ADP-ribosylation/Crystallin J1; ADP-ribosyl-(dinitrogen reductase) hydrolase 937213 4360193 RPE_0836 Rhodopseudomonas palustris BisA53 ADP-ribosyl-(dinitrogen reductase) hydrolase YP_779772.1 936329 R 316055 CDS YP_779773.1 115522862 4360194 complement(937236..938069) 1 NC_008435.1 PFAM: Dinitrogenase reductase ADP-ribosyltransferase; KEGG: rpc:RPC_0878 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 938069 4360194 RPE_0837 Rhodopseudomonas palustris BisA53 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase YP_779773.1 937236 R 316055 CDS YP_779774.1 115522863 4360195 938253..938978 1 NC_008435.1 PFAM: glutamine amidotransferase class-I; KEGG: rpc:RPC_0879 glutamine amidotransferase class-I; glutamine amidotransferase 938978 4360195 RPE_0838 Rhodopseudomonas palustris BisA53 glutamine amidotransferase YP_779774.1 938253 D 316055 CDS YP_779775.1 115522864 4360196 complement(939143..939568) 1 NC_008435.1 KEGG: bja:bll6198 hypothetical protein; hypothetical protein 939568 4360196 RPE_0839 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779775.1 939143 R 316055 CDS YP_779776.1 115522865 4360197 940000..940353 1 NC_008435.1 KEGG: bja:blr6203 hypothetical protein; hypothetical protein 940353 4360197 RPE_0840 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779776.1 940000 D 316055 CDS YP_779777.1 115522866 4360198 complement(940363..940587) 1 NC_008435.1 KEGG: bja:bsl6204 hypothetical protein; hypothetical protein 940587 4360198 RPE_0841 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779777.1 940363 R 316055 CDS YP_779778.1 115522867 4360199 complement(940668..941528) 1 NC_008435.1 KEGG: bja:bll6205 hypothetical protein; hypothetical protein 941528 4360199 RPE_0842 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779778.1 940668 R 316055 CDS YP_779779.1 115522868 4360200 complement(941613..942812) 1 NC_008435.1 KEGG: rpc:RPC_0883 coenzyme PQQ biosynthesis protein E; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; pyrroloquinoline quinone biosynthesis protein PqqE 942812 4360200 RPE_0843 Rhodopseudomonas palustris BisA53 pyrroloquinoline quinone biosynthesis protein PqqE YP_779779.1 941613 R 316055 CDS YP_779780.1 115522869 4358540 complement(942809..943138) 1 NC_008435.1 PFAM: coenzyme PQQ synthesis D; KEGG: rpd:RPD_2032 coenzyme PQQ synthesis D; coenzyme PQQ synthesis D 943138 4358540 RPE_0844 Rhodopseudomonas palustris BisA53 coenzyme PQQ synthesis D YP_779780.1 942809 R 316055 CDS YP_779781.1 115522870 4358541 complement(943148..943939) 1 NC_008435.1 Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 943939 4358541 RPE_0845 Rhodopseudomonas palustris BisA53 pyrroloquinoline quinone biosynthesis protein PqqC YP_779781.1 943148 R 316055 CDS YP_779782.1 115522871 4358542 complement(943936..944919) 1 NC_008435.1 possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 944919 4358542 RPE_0846 Rhodopseudomonas palustris BisA53 pyrroloquinoline quinone biosynthesis protein PqqB YP_779782.1 943936 R 316055 CDS YP_779783.1 115522872 4358543 945443..947023 1 NC_008435.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 947023 4358543 RPE_0847 Rhodopseudomonas palustris BisA53 acyl-CoA synthetase YP_779783.1 945443 D 316055 CDS YP_779784.1 115522873 4358544 947075..948292 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpa:RPA2193 putative ABC transporter, perplasmic binding protein, branched chain amino acids; extracellular ligand-binding receptor 948292 4358544 RPE_0848 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_779784.1 947075 D 316055 CDS YP_779785.1 115522874 4358545 complement(948436..949266) 1 NC_008435.1 KEGG: bja:blr6197 hypothetical protein; hypothetical protein 949266 4358545 RPE_0849 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779785.1 948436 R 316055 CDS YP_779786.1 115522875 4358546 complement(949319..950257) 1 NC_008435.1 PFAM: beta-lactamase domain protein; KEGG: bja:blr6196 hypothetical protein; beta-lactamase domain-containing protein 950257 4358546 RPE_0850 Rhodopseudomonas palustris BisA53 beta-lactamase domain-containing protein YP_779786.1 949319 R 316055 CDS YP_779787.1 115522876 4358547 951019..952830 1 NC_008435.1 PFAM: Pyrrolo-quinoline quinone; KEGG: bja:blr6213 methanol dehydrogenase large subunit-like protein; Pyrrolo-quinoline quinone 952830 4358547 RPE_0851 Rhodopseudomonas palustris BisA53 Pyrrolo-quinoline quinone YP_779787.1 951019 D 316055 CDS YP_779788.1 115522877 4358548 952992..953564 1 NC_008435.1 KEGG: bja:blr6214 putative cytochrome c protein; hypothetical protein 953564 4358548 RPE_0852 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779788.1 952992 D 316055 CDS YP_779789.1 115522878 4358549 953620..954549 1 NC_008435.1 SMART: extracellular solute-binding protein, family 3; KEGG: bja:bll6195 putative methanol oxidation protein; extracellular solute-binding protein 954549 4358549 RPE_0853 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_779789.1 953620 D 316055 CDS YP_779790.1 115522879 4358550 954593..955225 1 NC_008435.1 KEGG: bja:bll6194 hypothetical protein; hypothetical protein 955225 4358550 RPE_0854 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779790.1 954593 D 316055 CDS YP_779791.1 115522880 4358551 955472..956317 1 NC_008435.1 hypothetical protein 956317 4358551 RPE_0855 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779791.1 955472 D 316055 CDS YP_779792.1 115522881 4358552 956354..956683 1 NC_008435.1 hypothetical protein 956683 4358552 RPE_0856 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779792.1 956354 D 316055 CDS YP_779793.1 115522882 4358553 complement(956658..956930) 1 NC_008435.1 hypothetical protein 956930 4358553 RPE_0857 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779793.1 956658 R 316055 CDS YP_779794.1 115522883 4358554 complement(956970..958439) 1 NC_008435.1 PFAM: amine oxidase; KEGG: rpc:RPC_4728 FAD dependent oxidoreductase; FAD dependent oxidoreductase 958439 4358554 RPE_0858 Rhodopseudomonas palustris BisA53 FAD dependent oxidoreductase YP_779794.1 956970 R 316055 CDS YP_779795.1 115522884 4358555 complement(958553..959749) 1 NC_008435.1 KEGG: rpc:RPC_4727 hypothetical protein; hypothetical protein 959749 4358555 RPE_0859 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779795.1 958553 R 316055 CDS YP_779796.1 115522885 4358556 complement(959938..961374) 1 NC_008435.1 KEGG: mag:amb2703 hypothetical protein; hypothetical protein 961374 4358556 RPE_0860 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779796.1 959938 R 316055 CDS YP_779797.1 115522886 4358207 complement(961499..963142) 1 NC_008435.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia have multiple copies of the groEL gene which are active under different environmental conditions; the S. meliloti protein in this cluster is not associated with a groES gene; chaperonin GroEL 963142 groEL 4358207 groEL Rhodopseudomonas palustris BisA53 chaperonin GroEL YP_779797.1 961499 R 316055 CDS YP_779798.1 115522887 4358208 complement(963321..963617) 1 NC_008435.1 PFAM: chaperonin Cpn10; KEGG: rpc:RPC_4725 chaperonin Cpn10; chaperonin Cpn10 963617 4358208 RPE_0862 Rhodopseudomonas palustris BisA53 chaperonin Cpn10 YP_779798.1 963321 R 316055 CDS YP_779799.1 115522888 4358209 963807..964445 1 NC_008435.1 KEGG: rpc:RPC_4724 hypothetical protein; hypothetical protein 964445 4358209 RPE_0863 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779799.1 963807 D 316055 CDS YP_779800.1 115522889 4358210 964483..965691 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpb:RPB_1839 major facilitator superfamily MFS_1; major facilitator transporter 965691 4358210 RPE_0864 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_779800.1 964483 D 316055 CDS YP_779801.1 115522890 4358211 complement(965758..966546) 1 NC_008435.1 KEGG: rpc:RPC_4723 hypothetical protein; hypothetical protein 966546 4358211 RPE_0865 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779801.1 965758 R 316055 CDS YP_779802.1 115522891 4358212 966843..967643 1 NC_008435.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_4722 ErfK/YbiS/YcfS/YnhG; hypothetical protein 967643 4358212 RPE_0866 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779802.1 966843 D 316055 CDS YP_779803.1 115522892 4358213 complement(967887..968144) 1 NC_008435.1 KEGG: rpc:RPC_0352 hypothetical protein; hypothetical protein 968144 4358213 RPE_0867 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779803.1 967887 R 316055 CDS YP_779804.1 115522893 4358214 complement(968350..969180) 1 NC_008435.1 KEGG: rpc:RPC_4721 putative periplasmic ligand-binding sensor protein; putative periplasmic ligand-binding sensor protein 969180 4358214 RPE_0868 Rhodopseudomonas palustris BisA53 putative periplasmic ligand-binding sensor protein YP_779804.1 968350 R 316055 CDS YP_779805.1 115522894 4358215 complement(969336..970181) 1 NC_008435.1 PFAM: YdjC family protein; KEGG: rpd:RPD_4120 YdjC-like protein; hypothetical protein 970181 4358215 RPE_0869 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779805.1 969336 R 316055 CDS YP_779806.1 115522895 4358216 complement(970178..971212) 1 NC_008435.1 PFAM: glycosyl transferase, family 2; KEGG: rpc:RPC_4719 glycosyl transferase, family 2; glycosyl transferase family protein 971212 4358216 RPE_0870 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_779806.1 970178 R 316055 CDS YP_779807.1 115522896 4358217 complement(971313..972290) 1 NC_008435.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 972290 hisG 4358217 hisG Rhodopseudomonas palustris BisA53 ATP phosphoribosyltransferase YP_779807.1 971313 R 316055 CDS YP_779808.1 115522897 4358218 complement(972287..973450) 1 NC_008435.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 973450 hisZ 4358218 hisZ Rhodopseudomonas palustris BisA53 ATP phosphoribosyltransferase regulatory subunit YP_779808.1 972287 R 316055 CDS YP_779809.1 115522898 4358219 complement(973556..974332) 1 NC_008435.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 974332 4358219 RPE_0873 Rhodopseudomonas palustris BisA53 16S ribosomal RNA methyltransferase RsmE YP_779809.1 973556 R 316055 CDS YP_779810.1 115522899 4358220 974547..975230 1 NC_008435.1 KEGG: rpc:RPC_4712 hypothetical protein; hypothetical protein 975230 4358220 RPE_0874 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779810.1 974547 D 316055 CDS YP_779811.1 115522900 4358221 975237..976172 1 NC_008435.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 976172 ubiA 4358221 ubiA Rhodopseudomonas palustris BisA53 4-hydroxybenzoate polyprenyltransferase YP_779811.1 975237 D 316055 CDS YP_779812.1 115522901 4358222 complement(976576..977100) 1 NC_008435.1 KEGG: rpa:RPA1154 hypothetical protein; hypothetical protein 977100 4358222 RPE_0876 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779812.1 976576 R 316055 CDS YP_779813.1 115522902 4358223 977368..978774 1 NC_008435.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: rpc:RPC_4708 peptidase U62, modulator of DNA gyrase; C69 family peptidase 978774 4358223 RPE_0877 Rhodopseudomonas palustris BisA53 C69 family peptidase YP_779813.1 977368 D 316055 CDS YP_779814.1 115522903 4358224 978761..979594 1 NC_008435.1 PFAM: inositol monophosphatase; KEGG: rpc:RPC_4707 inositol monophosphatase; inositol monophosphatase 979594 4358224 RPE_0878 Rhodopseudomonas palustris BisA53 inositol monophosphatase YP_779814.1 978761 D 316055 CDS YP_779815.1 115522904 4360218 979630..979872 1 NC_008435.1 KEGG: rpc:RPC_4706 hypothetical protein; hypothetical protein 979872 4360218 RPE_0879 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779815.1 979630 D 316055 CDS YP_779816.1 115522905 4360219 979984..981288 1 NC_008435.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: rpc:RPC_4705 three-deoxy-D-manno-octulosonic-acid transferase-like; 3-deoxy-D-manno-octulosonic-acid transferase 981288 4360219 RPE_0880 Rhodopseudomonas palustris BisA53 3-deoxy-D-manno-octulosonic-acid transferase YP_779816.1 979984 D 316055 CDS YP_779817.1 115522906 4360220 981281..982303 1 NC_008435.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 982303 lpxK 4360220 lpxK Rhodopseudomonas palustris BisA53 tetraacyldisaccharide 4'-kinase YP_779817.1 981281 D 316055 CDS YP_779818.1 115522907 4360221 complement(982331..982552) 1 NC_008435.1 KEGG: rpc:RPC_4703 hypothetical protein; hypothetical protein 982552 4360221 RPE_0882 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779818.1 982331 R 316055 CDS YP_779819.1 115522908 4360222 complement(982823..985261) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rfr:Rfer_3395 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); diguanylate cyclase/phosphodiesterase 985261 4360222 RPE_0883 Rhodopseudomonas palustris BisA53 diguanylate cyclase/phosphodiesterase YP_779819.1 982823 R 316055 CDS YP_779820.1 115522909 4360223 complement(985262..986161) 1 NC_008435.1 SMART: extracellular solute-binding protein, family 3; KEGG: gsu:GSU1528 ABC transporter, periplasmic substrate-binding protein; extracellular solute-binding protein 986161 4360223 RPE_0884 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_779820.1 985262 R 316055 CDS YP_779821.1 115522910 4360224 complement(986277..987020) 1 NC_008435.1 KEGG: sme:SMc01718 hypothetical protein; hypothetical protein 987020 4360224 RPE_0885 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779821.1 986277 R 316055 CDS YP_779822.1 115522911 4360225 complement(987007..988449) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: ade:Adeh_1432 1-aminocyclopropane-1-carboxylate deaminase; 1-aminocyclopropane-1-carboxylate deaminase family protein 988449 4360225 RPE_0886 Rhodopseudomonas palustris BisA53 1-aminocyclopropane-1-carboxylate deaminase family protein YP_779822.1 987007 R 316055 CDS YP_779823.1 115522912 4360226 complement(988626..989738) 1 NC_008435.1 PFAM: SbmABacA family protein; ABC transporter domain protein; KEGG: rpc:RPC_4701 ABC transporter-like; SbmABacA family protein 989738 4360226 RPE_0887 Rhodopseudomonas palustris BisA53 SbmABacA family protein YP_779823.1 988626 R 316055 CDS YP_779824.1 115522913 4360227 990139..990366 1 NC_008435.1 KEGG: rpc:RPC_4700 hypothetical protein; hypothetical protein 990366 4360227 RPE_0888 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779824.1 990139 D 316055 CDS YP_779825.1 115522914 4360228 complement(990347..991630) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpc:RPC_4699 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 991630 4360228 RPE_0889 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_779825.1 990347 R 316055 CDS YP_779826.1 115522915 4360229 complement(991642..992004) 1 NC_008435.1 KEGG: rpc:RPC_4698 putative cytochrome c552 precursor; putative cytochrome c552 992004 4360229 RPE_0890 Rhodopseudomonas palustris BisA53 putative cytochrome c552 YP_779826.1 991642 R 316055 CDS YP_779827.1 115522916 4360230 complement(992001..992474) 1 NC_008435.1 KEGG: rpd:RPD_0769 hypothetical protein; hypothetical protein 992474 4360230 RPE_0891 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779827.1 992001 R 316055 CDS YP_779828.1 115522917 4360231 complement(992587..994416) 1 NC_008435.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpc:RPC_4696 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 994416 4360231 RPE_0892 Rhodopseudomonas palustris BisA53 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_779828.1 992587 R 316055 CDS YP_779829.1 115522918 4360232 994575..995417 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_4695 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 995417 4360232 RPE_0893 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_779829.1 994575 D 316055 CDS YP_779830.1 115522919 4360233 995451..996467 1 NC_008435.1 KEGG: rpc:RPC_4694 putative adenylate/guanylate cyclase; putative adenylate/guanylate cyclase 996467 4360233 RPE_0894 Rhodopseudomonas palustris BisA53 putative adenylate/guanylate cyclase YP_779830.1 995451 D 316055 CDS YP_779831.1 115522920 4360234 complement(996589..997965) 1 NC_008435.1 PFAM: cytochrome P450; KEGG: rpc:RPC_4693 cytochrome P450; cytochrome P450 997965 4360234 RPE_0895 Rhodopseudomonas palustris BisA53 cytochrome P450 YP_779831.1 996589 R 316055 CDS YP_779832.1 115522921 4357756 998218..999147 1 NC_008435.1 putative metalloprotease; heat shock protein HtpX 999147 4357756 RPE_0896 Rhodopseudomonas palustris BisA53 heat shock protein HtpX YP_779832.1 998218 D 316055 CDS YP_779833.1 115522922 4357757 complement(999358..1000542) 1 NC_008435.1 PFAM: aminotransferase, class V; KEGG: rpc:RPC_4689 aminotransferase, class V; class V aminotransferase 1000542 4357757 RPE_0897 Rhodopseudomonas palustris BisA53 class V aminotransferase YP_779833.1 999358 R 316055 CDS YP_779834.1 115522923 4357758 complement(1000923..1001681) 1 NC_008435.1 PFAM: nuclease (SNase domain protein); KEGG: rpc:RPC_4688 nuclease (SNase-like); nuclease 1001681 4357758 RPE_0898 Rhodopseudomonas palustris BisA53 nuclease YP_779834.1 1000923 R 316055 CDS YP_779835.1 115522924 4357759 complement(1001775..1003511) 1 NC_008435.1 KEGG: rpc:RPC_4687 hypothetical protein; hypothetical protein 1003511 4357759 RPE_0899 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779835.1 1001775 R 316055 CDS YP_779836.1 115522925 4357760 1003825..1004694 1 NC_008435.1 PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rpc:RPC_4686 peptidase C14, caspase catalytic subunit P20; peptidase C14, caspase catalytic subunit p20 1004694 4357760 RPE_0900 Rhodopseudomonas palustris BisA53 peptidase C14, caspase catalytic subunit p20 YP_779836.1 1003825 D 316055 CDS YP_779837.1 115522926 4357761 complement(1004741..1006879) 1 NC_008435.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 1006879 4357761 RPE_0901 Rhodopseudomonas palustris BisA53 glucosyltransferase MdoH YP_779837.1 1004741 R 316055 CDS YP_779838.1 115522927 4357762 complement(1006867..1008372) 1 NC_008435.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 1008372 mdoG 4357762 mdoG Rhodopseudomonas palustris BisA53 glucan biosynthesis protein G YP_779838.1 1006867 R 316055 CDS YP_779839.1 115522928 4357763 complement(1008520..1009422) 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rpc:RPC_4685 secretion protein HlyD; RND family efflux transporter MFP subunit 1009422 4357763 RPE_0903 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_779839.1 1008520 R 316055 CDS YP_779840.1 115522929 4357764 complement(1009475..1011328) 1 NC_008435.1 PFAM: AsmA family protein; KEGG: rpd:RPD_1004 AsmA; AsmA family protein 1011328 4357764 RPE_0904 Rhodopseudomonas palustris BisA53 AsmA family protein YP_779840.1 1009475 R 316055 CDS YP_779841.1 115522930 4357765 complement(1011362..1014520) 1 NC_008435.1 PFAM: acriflavin resistance protein; KEGG: rpc:RPC_0885 acriflavin resistance protein; acriflavin resistance protein 1014520 4357765 RPE_0905 Rhodopseudomonas palustris BisA53 acriflavin resistance protein YP_779841.1 1011362 R 316055 CDS YP_779842.1 115522931 4357766 complement(1014520..1015413) 1 NC_008435.1 KEGG: rpc:RPC_0886 secretion protein HlyD; secretion protein HlyD 1015413 4357766 RPE_0906 Rhodopseudomonas palustris BisA53 secretion protein HlyD YP_779842.1 1014520 R 316055 CDS YP_779843.1 115522932 4357767 complement(1015559..1016218) 1 NC_008435.1 PFAM: OmpA/MotB domain protein; KEGG: rpb:RPB_0896 OmpA/MotB; OmpA/MotB domain-containing protein 1016218 4357767 RPE_0907 Rhodopseudomonas palustris BisA53 OmpA/MotB domain-containing protein YP_779843.1 1015559 R 316055 CDS YP_779844.1 115522933 4357768 complement(1016321..1017796) 1 NC_008435.1 PFAM: TPR repeat-containing protein; peptidase C14, caspase catalytic subunit p20; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpb:RPB_0897 peptidase C14, caspase catalytic subunit P20; peptidase C14, caspase catalytic subunit p20 1017796 4357768 RPE_0908 Rhodopseudomonas palustris BisA53 peptidase C14, caspase catalytic subunit p20 YP_779844.1 1016321 R 316055 CDS YP_779845.1 115522934 4357769 1018101..1019720 1 NC_008435.1 PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: rpc:RPC_0888 monooxygenase, FAD-binding; FAD-dependent oxidoreductase 1019720 4357769 RPE_0909 Rhodopseudomonas palustris BisA53 FAD-dependent oxidoreductase YP_779845.1 1018101 D 316055 CDS YP_779846.1 115522935 4357770 1020235..1020462 1 NC_008435.1 KEGG: rpb:RPB_0904 hypothetical protein; hypothetical protein 1020462 4357770 RPE_0910 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779846.1 1020235 D 316055 CDS YP_779847.1 115522936 4357771 1020620..1021573 1 NC_008435.1 PFAM: beta-lactamase domain protein; KEGG: rpa:RPA4673 putative beta lactamase precursor; beta-lactamase domain-containing protein 1021573 4357771 RPE_0911 Rhodopseudomonas palustris BisA53 beta-lactamase domain-containing protein YP_779847.1 1020620 D 316055 CDS YP_779848.1 115522937 4357772 1021615..1022961 1 NC_008435.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 1022961 4357772 RPE_0912 Rhodopseudomonas palustris BisA53 homogentisate 1,2-dioxygenase YP_779848.1 1021615 D 316055 CDS YP_779849.1 115522938 4357773 1023100..1024413 1 NC_008435.1 KEGG: rpb:RPB_0909 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetase 1024413 4357773 RPE_0913 Rhodopseudomonas palustris BisA53 fumarylacetoacetase YP_779849.1 1023100 D 316055 CDS YP_779850.1 115522939 4359628 complement(1024610..1026211) 1 NC_008435.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1026211 hisS 4359628 hisS Rhodopseudomonas palustris BisA53 histidyl-tRNA synthetase YP_779850.1 1024610 R 316055 CDS YP_779851.1 115522940 4359629 1026361..1027704 1 NC_008435.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1027704 4359629 RPE_0915 Rhodopseudomonas palustris BisA53 beta alanine--pyruvate transaminase YP_779851.1 1026361 D 316055 CDS YP_779852.1 115522941 4359630 1028115..1029596 1 NC_008435.1 PFAM: EAL domain protein; KEGG: rpc:RPC_0895 diguanylate phosphodiesterase (EAL domain); diguanylate phosphodiesterase 1029596 4359630 RPE_0916 Rhodopseudomonas palustris BisA53 diguanylate phosphodiesterase YP_779852.1 1028115 D 316055 CDS YP_779853.1 115522942 4359631 1029612..1030466 1 NC_008435.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_0896 HAD-superfamily hydrolase, subfamily IIA; HAD family hydrolase 1030466 4359631 RPE_0917 Rhodopseudomonas palustris BisA53 HAD family hydrolase YP_779853.1 1029612 D 316055 CDS YP_779854.1 115522943 4359632 complement(1030533..1031999) 1 NC_008435.1 KEGG: sco:SCO2383 secreted protein; hypothetical protein 1031999 4359632 RPE_0918 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779854.1 1030533 R 316055 CDS YP_779855.1 115522944 4359633 complement(1032020..1033084) 1 NC_008435.1 hypothetical protein 1033084 4359633 RPE_0919 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779855.1 1032020 R 316055 CDS YP_779856.1 115522945 4359634 complement(1033253..1033648) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_0897 response regulator receiver domain protein (CheY-like); response regulator receiver protein 1033648 4359634 RPE_0920 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_779856.1 1033253 R 316055 CDS YP_779857.1 115522946 4359635 1033979..1034839 1 NC_008435.1 PFAM: protein of unknown function DUF519; KEGG: rpc:RPC_0898 protein of unknown function DUF519; hypothetical protein 1034839 4359635 RPE_0921 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779857.1 1033979 D 316055 CDS YP_779858.1 115522947 4359636 1035099..1035311 1 NC_008435.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rpc:RPC_0899 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1035311 4359636 RPE_0922 Rhodopseudomonas palustris BisA53 cold-shock DNA-binding domain-containing protein YP_779858.1 1035099 D 316055 CDS YP_779859.1 115522948 4359637 complement(1035466..1036089) 1 NC_008435.1 KEGG: rpc:RPC_0900 putative outer-membrane immunogenic protein precursor; putative outer-membrane immunogenic protein 1036089 4359637 RPE_0923 Rhodopseudomonas palustris BisA53 putative outer-membrane immunogenic protein YP_779859.1 1035466 R 316055 CDS YP_779860.1 115522949 4359638 1036333..1038375 1 NC_008435.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1038375 uvrC 4359638 uvrC Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_779860.1 1036333 D 316055 CDS YP_779861.1 115522950 4359639 1038488..1039105 1 NC_008435.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpc:RPC_0902 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1039105 4359639 RPE_0925 Rhodopseudomonas palustris BisA53 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_779861.1 1038488 D 316055 CDS YP_779862.1 115522951 4359640 1039102..1039353 1 NC_008435.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: rpb:RPB_1175 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 1039353 4359640 RPE_0926 Rhodopseudomonas palustris BisA53 molybdopterin converting factor subunit 1 YP_779862.1 1039102 D 316055 CDS YP_779863.1 115522952 4359641 1039361..1039828 1 NC_008435.1 PFAM: molybdopterin biosynthesis MoaE; KEGG: rpd:RPD_1278 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE 1039828 4359641 RPE_0927 Rhodopseudomonas palustris BisA53 molybdopterin biosynthesis MoaE YP_779863.1 1039361 D 316055 CDS YP_779864.1 115522953 4359642 1039828..1040850 1 NC_008435.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1040850 4359642 RPE_0928 Rhodopseudomonas palustris BisA53 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_779864.1 1039828 D 316055 CDS YP_779865.1 115522954 4359643 complement(1041071..1041682) 1 NC_008435.1 TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: rpc:RPC_0906 conserved hypothetical protein 95; putative methyltransferase 1041682 4359643 RPE_0929 Rhodopseudomonas palustris BisA53 putative methyltransferase YP_779865.1 1041071 R 316055 CDS YP_779866.1 115522955 4359644 complement(1041884..1044247) 1 NC_008435.1 TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rpc:RPC_0907 pseudouridine synthase, Rsu; pseudouridine synthase Rsu 1044247 4359644 RPE_0930 Rhodopseudomonas palustris BisA53 pseudouridine synthase Rsu YP_779866.1 1041884 R 316055 CDS YP_779867.1 115522956 4358712 1044410..1044856 1 NC_008435.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: rpa:RPA1164 possible cytidine and deoxycytidylate deaminase; zinc-binding CMP/dCMP deaminase 1044856 4358712 RPE_0931 Rhodopseudomonas palustris BisA53 zinc-binding CMP/dCMP deaminase YP_779867.1 1044410 D 316055 CDS YP_779868.1 115522957 4358713 complement(1044861..1045334) 1 NC_008435.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rpc:RPC_0909 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase 1045334 4358713 RPE_0932 Rhodopseudomonas palustris BisA53 isoprenylcysteine carboxyl methyltransferase YP_779868.1 1044861 R 316055 CDS YP_779869.1 115522958 4358714 complement(1045517..1045996) 1 NC_008435.1 PFAM: transcriptional regulator PadR family protein; KEGG: rpc:RPC_3227 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 1045996 4358714 RPE_0933 Rhodopseudomonas palustris BisA53 PadR-like family transcriptional regulator YP_779869.1 1045517 R 316055 CDS YP_779870.1 115522959 4358715 1046453..1047583 1 NC_008435.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rpc:RPC_0910 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1047583 4358715 RPE_0934 Rhodopseudomonas palustris BisA53 L-carnitine dehydratase/bile acid-inducible protein F YP_779870.1 1046453 D 316055 CDS YP_779871.1 115522960 4358716 1047616..1047819 1 NC_008435.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: rpd:RPD_1290 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase 1047819 4358716 RPE_0935 Rhodopseudomonas palustris BisA53 4-oxalocrotonate tautomerase YP_779871.1 1047616 D 316055 CDS YP_779872.1 115522961 4358717 1047968..1048366 1 NC_008435.1 KEGG: bja:bll7455 hypothetical protein; hypothetical protein 1048366 4358717 RPE_0936 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779872.1 1047968 D 316055 CDS YP_779873.1 115522962 4358718 complement(1048665..1050728) 1 NC_008435.1 KEGG: rpc:RPC_0912 hypothetical protein; hypothetical protein 1050728 4358718 RPE_0937 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779873.1 1048665 R 316055 CDS YP_779874.1 115522963 4358719 complement(1050901..1053765) 1 NC_008435.1 TIGRFAM: conserved hypothetical membrane protein; KEGG: rpc:RPC_0914 double-transmembrane region-like; double-transmembrane region-like protein 1053765 4358719 RPE_0938 Rhodopseudomonas palustris BisA53 double-transmembrane region-like protein YP_779874.1 1050901 R 316055 CDS YP_779875.1 115522964 4358720 complement(1053762..1054700) 1 NC_008435.1 KEGG: rpc:RPC_0915 DUF58; hypothetical protein 1054700 4358720 RPE_0939 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779875.1 1053762 R 316055 CDS YP_779876.1 115522965 4358721 complement(1054700..1055701) 1 NC_008435.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: rpc:RPC_0916 ATPase associated with various cellular activities, AAA_3; ATPase 1055701 4358721 RPE_0940 Rhodopseudomonas palustris BisA53 ATPase YP_779876.1 1054700 R 316055 CDS YP_779877.1 115522966 4358722 1055910..1056515 1 NC_008435.1 PFAM: protein of unknown function DUF1285; KEGG: rpb:RPB_1193 protein of unknown function DUF1285; hypothetical protein 1056515 4358722 RPE_0941 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779877.1 1055910 D 316055 CDS YP_779878.1 115522967 4358723 1056512..1057189 1 NC_008435.1 PFAM: NUDIX hydrolase; KEGG: rpc:RPC_0918 NUDIX hydrolase; NUDIX hydrolase 1057189 4358723 RPE_0942 Rhodopseudomonas palustris BisA53 NUDIX hydrolase YP_779878.1 1056512 D 316055 CDS YP_779879.1 115522968 4358724 1057186..1057449 1 NC_008435.1 KEGG: rpc:RPC_0919 hypothetical protein; hypothetical protein 1057449 4358724 RPE_0943 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779879.1 1057186 D 316055 CDS YP_779880.1 115522969 4358725 1057463..1058719 1 NC_008435.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: rpc:RPC_0920 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 1058719 4358725 RPE_0944 Rhodopseudomonas palustris BisA53 polynucleotide adenylyltransferase YP_779880.1 1057463 D 316055 CDS YP_779881.1 115522970 4358726 complement(1058873..1059115) 1 NC_008435.1 KEGG: rpc:RPC_0921 hypothetical protein; hypothetical protein 1059115 4358726 RPE_0945 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779881.1 1058873 R 316055 CDS YP_779882.1 115522971 4358727 complement(1059233..1059865) 1 NC_008435.1 KEGG: nwi:Nwi_2619 hypothetical protein; hypothetical protein 1059865 4358727 RPE_0946 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779882.1 1059233 R 316055 CDS YP_779883.1 115522972 4358728 complement(1059862..1060323) 1 NC_008435.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rpc:RPC_0923 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 1060323 4358728 RPE_0947 Rhodopseudomonas palustris BisA53 tRNA/rRNA methyltransferase SpoU YP_779883.1 1059862 R 316055 CDS YP_779884.1 115522973 4358729 1060607..1061134 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rpc:RPC_0924 ubiquinol-cytochrome c reductase, iron-sulfur subunit; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1061134 4358729 RPE_0948 Rhodopseudomonas palustris BisA53 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_779884.1 1060607 D 316055 CDS YP_779885.1 115522974 4358915 1061185..1063260 1 NC_008435.1 PFAM: cytochrome c1; Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; KEGG: rpc:RPC_0925 cytochrome c1; cytochrome c1 1063260 4358915 RPE_0949 Rhodopseudomonas palustris BisA53 cytochrome c1 YP_779885.1 1061185 D 316055 CDS YP_779886.1 115522975 4358916 1063405..1064079 1 NC_008435.1 PFAM: dienelactone hydrolase; KEGG: rpc:RPC_0926 carboxymethylenebutenolidase; carboxymethylenebutenolidase 1064079 4358916 RPE_0950 Rhodopseudomonas palustris BisA53 carboxymethylenebutenolidase YP_779886.1 1063405 D 316055 CDS YP_779887.1 115522976 4358917 1064149..1064430 1 NC_008435.1 KEGG: rpd:RPD_1305 hypothetical protein; hypothetical protein 1064430 4358917 RPE_0951 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779887.1 1064149 D 316055 CDS YP_779888.1 115522977 4358918 1064923..1066941 1 NC_008435.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rpc:RPC_0929 NADH dehydrogenase (quinone); hydrogenase 4 subunit B 1066941 4358918 RPE_0952 Rhodopseudomonas palustris BisA53 hydrogenase 4 subunit B YP_779888.1 1064923 D 316055 CDS YP_779889.1 115522978 4358919 1066932..1067891 1 NC_008435.1 KEGG: rpc:RPC_0930 respiratory-chain NADH dehydrogenase, subunit 1; respiratory-chain NADH dehydrogenase subunit 1 1067891 4358919 RPE_0953 Rhodopseudomonas palustris BisA53 respiratory-chain NADH dehydrogenase subunit 1 YP_779889.1 1066932 D 316055 CDS YP_779890.1 115522979 4358920 1067891..1068553 1 NC_008435.1 KEGG: rpc:RPC_0931 hypothetical protein; hypothetical protein 1068553 4358920 RPE_0954 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779890.1 1067891 D 316055 CDS YP_779891.1 115522980 4358921 1068550..1070001 1 NC_008435.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rpc:RPC_0932 NADH dehydrogenase (quinone); hydrogenase 4 subunit F 1070001 4358921 RPE_0955 Rhodopseudomonas palustris BisA53 hydrogenase 4 subunit F YP_779891.1 1068550 D 316055 CDS YP_779892.1 115522981 4358922 1070014..1071522 1 NC_008435.1 PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: rpc:RPC_0933 NADH-ubiquinone oxidoreductase, chain 49kDa; NADH-ubiquinone oxidoreductase subunit 49kDa 1071522 4358922 RPE_0956 Rhodopseudomonas palustris BisA53 NADH-ubiquinone oxidoreductase subunit 49kDa YP_779892.1 1070014 D 316055 CDS YP_779893.1 115522982 4358923 1071529..1072050 1 NC_008435.1 PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: bja:blr6344 probable hydrogenase-3 subunit G; NADH ubiquinone oxidoreductase, 20 kDa subunit 1072050 4358923 RPE_0957 Rhodopseudomonas palustris BisA53 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_779893.1 1071529 D 316055 CDS YP_779894.1 115522983 4358924 1072197..1074242 1 NC_008435.1 TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: rpd:RPD_3849 outer membrane autotransporter barrel; outer membrane autotransporter 1074242 4358924 RPE_0958 Rhodopseudomonas palustris BisA53 outer membrane autotransporter YP_779894.1 1072197 D 316055 CDS YP_779895.1 115522984 4358925 complement(1074418..1074792) 1 NC_008435.1 KEGG: rpc:RPC_0935 hypothetical protein; hypothetical protein 1074792 4358925 RPE_0959 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779895.1 1074418 R 316055 CDS YP_779896.1 115522985 4358926 1074989..1075783 1 NC_008435.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpc:RPC_0936 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1075783 4358926 RPE_0960 Rhodopseudomonas palustris BisA53 MotA/TolQ/ExbB proton channel YP_779896.1 1074989 D 316055 CDS YP_779897.1 115522986 4358927 1075788..1076231 1 NC_008435.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpc:RPC_0937 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1076231 4358927 RPE_0961 Rhodopseudomonas palustris BisA53 biopolymer transport protein ExbD/TolR YP_779897.1 1075788 D 316055 CDS YP_779898.1 115522987 4358928 1076228..1077088 1 NC_008435.1 TIGRFAM: TonB family protein; KEGG: rpc:RPC_0938 TonB-like; TonB family protein 1077088 4358928 RPE_0962 Rhodopseudomonas palustris BisA53 TonB family protein YP_779898.1 1076228 D 316055 CDS YP_779899.1 115522988 4358929 1077313..1077465 1 NC_008435.1 KEGG: bja:bll7951 hypothetical protein; hypothetical protein 1077465 4358929 RPE_0963 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779899.1 1077313 D 316055 CDS YP_779900.1 115522989 4358930 1077692..1077967 1 NC_008435.1 PFAM: protein of unknown function DUF1153; KEGG: nha:Nham_0692 protein of unknown function DUF1153; hypothetical protein 1077967 4358930 RPE_0964 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779900.1 1077692 D 316055 CDS YP_779901.1 115522990 4358931 1078142..1079749 1 NC_008435.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1079749 fliF 4358931 fliF Rhodopseudomonas palustris BisA53 flagellar MS-ring protein YP_779901.1 1078142 D 316055 CDS YP_779902.1 115522991 4358798 1079757..1080845 1 NC_008435.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 1080845 fliG 4358798 fliG Rhodopseudomonas palustris BisA53 flagellar motor switch protein G YP_779902.1 1079757 D 316055 CDS YP_779903.1 115522992 4358799 1080845..1081489 1 NC_008435.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 1081489 fliH 4358799 fliH Rhodopseudomonas palustris BisA53 flagellar assembly protein H YP_779903.1 1080845 D 316055 CDS YP_779904.1 115522993 4358800 1081493..1081843 1 NC_008435.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 1081843 4358800 RPE_0968 Rhodopseudomonas palustris BisA53 flagellar motor switch protein YP_779904.1 1081493 D 316055 CDS YP_779905.1 115522994 4358801 1081897..1083279 1 NC_008435.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_0945 two component, sigma54 specific, transcriptional regulator, fis family; two component sigma54 specific Fis family transcriptional regulator 1083279 4358801 RPE_0969 Rhodopseudomonas palustris BisA53 two component sigma54 specific Fis family transcriptional regulator YP_779905.1 1081897 D 316055 CDS YP_779906.1 115522995 4358802 complement(1083494..1083649) 1 NC_008435.1 KEGG: rpc:RPC_0946 hypothetical protein; hypothetical protein 1083649 4358802 RPE_0970 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779906.1 1083494 R 316055 CDS YP_779907.1 115522996 4358803 complement(1083836..1084114) 1 NC_008435.1 KEGG: rpc:RPC_0947 hypothetical protein; hypothetical protein 1084114 4358803 RPE_0971 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779907.1 1083836 R 316055 CDS YP_779908.1 115522997 4358804 complement(1084182..1084400) 1 NC_008435.1 hypothetical protein 1084400 4358804 RPE_0972 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779908.1 1084182 R 316055 CDS YP_779909.1 115522998 4358805 complement(1084490..1084753) 1 NC_008435.1 KEGG: rpa:RPA1271 hypothetical protein; hypothetical protein 1084753 4358805 RPE_0973 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779909.1 1084490 R 316055 CDS YP_779910.1 115522999 4358806 1085043..1085852 1 NC_008435.1 PFAM: transglutaminase domain protein; KEGG: rpc:RPC_0949 transglutaminase-like; transglutaminase domain-containing protein 1085852 4358806 RPE_0974 Rhodopseudomonas palustris BisA53 transglutaminase domain-containing protein YP_779910.1 1085043 D 316055 CDS YP_779911.1 115523000 4358807 1085952..1087061 1 NC_008435.1 KEGG: rpc:RPC_0955 exodeoxyribonuclease V; exodeoxyribonuclease V 1087061 4358807 RPE_0975 Rhodopseudomonas palustris BisA53 exodeoxyribonuclease V YP_779911.1 1085952 D 316055 CDS YP_779912.1 115523001 4358808 complement(1087227..1087967) 1 NC_008435.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_0956 methyltransferase type 12; type 12 methyltransferase 1087967 4358808 RPE_0976 Rhodopseudomonas palustris BisA53 type 12 methyltransferase YP_779912.1 1087227 R 316055 CDS YP_779913.1 115523002 4358809 1088125..1088646 1 NC_008435.1 PFAM: Ferritin, Dps family protein; KEGG: rpa:RPA1274 possible Dps protein family starvation-inducible DNA-binding protein; Ferritin, Dps family protein 1088646 4358809 RPE_0977 Rhodopseudomonas palustris BisA53 Ferritin, Dps family protein YP_779913.1 1088125 D 316055 CDS YP_779914.1 115523003 4358810 complement(1090283..1090807) 1 NC_008435.1 KEGG: rpc:RPC_0958 uncharacterized protein containing double-stranded beta helix domain-like; double-stranded beta helix domain-containing protein 1090807 4358810 RPE_0978 Rhodopseudomonas palustris BisA53 double-stranded beta helix domain-containing protein YP_779914.1 1090283 R 316055 CDS YP_779915.1 115523004 4358811 complement(1091029..1092219) 1 NC_008435.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1092219 4358811 RPE_0979 Rhodopseudomonas palustris BisA53 carbamoyl phosphate synthase small subunit YP_779915.1 1091029 R 316055 CDS YP_779916.1 115523005 4358812 1092483..1092938 1 NC_008435.1 PFAM: GatB/Yqey domain protein; KEGG: rpa:RPA1278 GatB/YqeY; GatB/Yqey domain-containing protein 1092938 4358812 RPE_0980 Rhodopseudomonas palustris BisA53 GatB/Yqey domain-containing protein YP_779916.1 1092483 D 316055 CDS YP_779917.1 115523006 4358813 complement(1093082..1094425) 1 NC_008435.1 KEGG: rpc:RPC_0698 phenylacetate--CoA ligase; phenylacetate--CoA ligase 1094425 4358813 RPE_0981 Rhodopseudomonas palustris BisA53 phenylacetate--CoA ligase YP_779917.1 1093082 R 316055 CDS YP_779918.1 115523007 4358814 complement(1094508..1095062) 1 NC_008435.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: rpc:RPC_0697 pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase 1095062 4358814 RPE_0982 Rhodopseudomonas palustris BisA53 pyruvate ferredoxin/flavodoxin oxidoreductase YP_779918.1 1094508 R 316055 CDS YP_779919.1 115523008 4358815 complement(1095062..1095901) 1 NC_008435.1 catalyzes the coenzyme A dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1095901 4358815 RPE_0983 Rhodopseudomonas palustris BisA53 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_779919.1 1095062 R 316055 CDS YP_779920.1 115523009 4357827 complement(1095901..1097061) 1 NC_008435.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rpc:RPC_0695 pyruvate flavodoxin/ferredoxin oxidoreductase-like; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1097061 4357827 RPE_0984 Rhodopseudomonas palustris BisA53 2-oxoglutarate ferredoxin oxidoreductase subunit alpha YP_779920.1 1095901 R 316055 CDS YP_779921.1 115523010 4357828 complement(1097058..1097996) 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: rpc:RPC_0694 pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase 1097996 4357828 RPE_0985 Rhodopseudomonas palustris BisA53 pyruvate ferredoxin/flavodoxin oxidoreductase YP_779921.1 1097058 R 316055 CDS YP_779922.1 115523011 4357829 complement(1097993..1099810) 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: rpc:RPC_0693 thiamine pyrophosphate enzyme-like TPP-binding; thiamine pyrophosphate binding domain-containing protein 1099810 4357829 RPE_0986 Rhodopseudomonas palustris BisA53 thiamine pyrophosphate binding domain-containing protein YP_779922.1 1097993 R 316055 CDS YP_779923.1 115523012 4357830 1100031..1100900 1 NC_008435.1 TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain; KEGG: rpc:RPC_0692 phenylacetic acid degradation operon negative regulatory protein PaaX; phenylacetic acid degradation operon negative regulatory protein PaaX 1100900 4357830 RPE_0987 Rhodopseudomonas palustris BisA53 phenylacetic acid degradation operon negative regulatory protein PaaX YP_779923.1 1100031 D 316055 CDS YP_779924.1 115523013 4357831 1100974..1101963 1 NC_008435.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 1101963 paaA 4357831 paaA Rhodopseudomonas palustris BisA53 phenylacetate-CoA oxygenase subunit PaaA YP_779924.1 1100974 D 316055 CDS YP_779925.1 115523014 4357832 1102157..1102444 1 NC_008435.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 1102444 paaB 4357832 paaB Rhodopseudomonas palustris BisA53 phenylacetate-CoA oxygenase subunit PaaB YP_779925.1 1102157 D 316055 CDS YP_779926.1 115523015 4357833 1102635..1103411 1 NC_008435.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: rpc:RPC_0689 phenylacetate-CoA oxygenase, PaaI subunit; phenylacetate-CoA oxygenase subunit PaaI 1103411 4357833 RPE_0990 Rhodopseudomonas palustris BisA53 phenylacetate-CoA oxygenase subunit PaaI YP_779926.1 1102635 D 316055 CDS YP_779927.1 115523016 4357834 1103405..1103908 1 NC_008435.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: rpd:RPD_1827 phenylacetate-CoA oxygenase, PaaJ subunit; phenylacetate-CoA oxygenase subunit PaaJ 1103908 4357834 RPE_0991 Rhodopseudomonas palustris BisA53 phenylacetate-CoA oxygenase subunit PaaJ YP_779927.1 1103405 D 316055 CDS YP_779928.1 115523017 4357835 1104098..1105180 1 NC_008435.1 TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: rpc:RPC_0687 phenylacetate-CoA oxygenase/reductase, PaaK subunit; phenylacetate-CoA oxygenase/reductase subunit PaaK 1105180 4357835 RPE_0992 Rhodopseudomonas palustris BisA53 phenylacetate-CoA oxygenase/reductase subunit PaaK YP_779928.1 1104098 D 316055 CDS YP_779929.1 115523018 4357836 complement(1105211..1105522) 1 NC_008435.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: rpc:RPC_0686 ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD 1105522 4357836 RPE_0993 Rhodopseudomonas palustris BisA53 ethyl tert-butyl ether degradation EthD YP_779929.1 1105211 R 316055 CDS YP_779930.1 115523019 4357837 complement(1105588..1107687) 1 NC_008435.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 1107687 4357837 RPE_0994 Rhodopseudomonas palustris BisA53 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase YP_779930.1 1105588 R 316055 CDS YP_779931.1 115523020 4357838 complement(1107776..1108414) 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_0684 transcriptional regulator, TetR family; TetR family transcriptional regulator 1108414 4357838 RPE_0995 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_779931.1 1107776 R 316055 CDS YP_779932.1 115523021 4357839 complement(1108434..1109768) 1 NC_008435.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: rpc:RPC_0683 phenylacetate-CoA ligase; phenylacetate-CoA ligase 1109768 4357839 RPE_0996 Rhodopseudomonas palustris BisA53 phenylacetate-CoA ligase YP_779932.1 1108434 R 316055 CDS YP_779933.1 115523022 4357840 complement(1109776..1110258) 1 NC_008435.1 TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_0682 phenylacetic acid degradation protein PaaD; phenylacetic acid degradation protein PaaD 1110258 4357840 RPE_0997 Rhodopseudomonas palustris BisA53 phenylacetic acid degradation protein PaaD YP_779933.1 1109776 R 316055 CDS YP_779934.1 115523023 4357841 complement(1110258..1111043) 1 NC_008435.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1111043 4357841 RPE_0998 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase YP_779934.1 1110258 R 316055 CDS YP_779935.1 115523024 4357842 1111240..1112421 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpa:RPA4019 putative branched-chain amino acid ABC transporter system substrate-binding protein; extracellular ligand-binding receptor 1112421 4357842 RPE_0999 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_779935.1 1111240 D 316055 CDS YP_779936.1 115523025 4357843 1112596..1113471 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpa:RPA4020 possible branched-chain amino acid transport system permease protein; inner-membrane translocator 1113471 4357843 RPE_1000 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_779936.1 1112596 D 316055 CDS YP_779937.1 115523026 4359802 1113475..1114419 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpa:RPA4021 putative branched-chain amino acid ABC transport system permease protein livm (liv-I protein m); inner-membrane translocator 1114419 4359802 RPE_1001 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_779937.1 1113475 D 316055 CDS YP_779938.1 115523027 4359803 1114416..1115198 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA4022 putative branched-chain amino acid ABC transport system, ATP-binding protein; ABC transporter-like protein 1115198 4359803 RPE_1002 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779938.1 1114416 D 316055 CDS YP_779939.1 115523028 4359804 1115191..1115895 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0676 ABC transporter related; ABC transporter-like protein 1115895 4359804 RPE_1003 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_779939.1 1115191 D 316055 CDS YP_779940.1 115523029 4359805 1116023..1117045 1 NC_008435.1 KEGG: bja:bll4740 nonspecific acid phosphatase precursor; nonspecific acid phosphatase 1117045 4359805 RPE_1004 Rhodopseudomonas palustris BisA53 nonspecific acid phosphatase YP_779940.1 1116023 D 316055 CDS YP_779941.1 115523030 4359806 complement(1117413..1118078) 1 NC_008435.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rpd:RPD_1558 response regulator receiver; two component LuxR family transcriptional regulator 1118078 4359806 RPE_1005 Rhodopseudomonas palustris BisA53 two component LuxR family transcriptional regulator YP_779941.1 1117413 R 316055 CDS YP_779942.1 115523031 4359807 complement(1118274..1119668) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rpd:RPD_1559 ATP-binding region, ATPase-like; putative signal transduction histidine kinase 1119668 4359807 RPE_1006 Rhodopseudomonas palustris BisA53 putative signal transduction histidine kinase YP_779942.1 1118274 R 316055 CDS YP_779943.1 115523032 4359808 1120059..1129400 1 NC_008435.1 PFAM: Hemolysin-type calcium-binding region; Animal heme peroxidase; KEGG: rpd:RPD_1560 Animal heme peroxidase; heme peroxidase 1129400 4359808 RPE_1007 Rhodopseudomonas palustris BisA53 heme peroxidase YP_779943.1 1120059 D 316055 CDS YP_779944.1 115523033 4359809 1129494..1131245 1 NC_008435.1 KEGG: rpd:RPD_1561 type I secretion system ATPase, PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 1131245 4359809 RPE_1008 Rhodopseudomonas palustris BisA53 type I secretion system ATPase YP_779944.1 1129494 D 316055 CDS YP_779945.1 115523034 4359810 1131242..1133446 1 NC_008435.1 KEGG: rpd:RPD_1562 RTX toxins and related Ca2+-binding proteins-like; RTX toxins and related Ca2+-binding proteins-like protein 1133446 4359810 RPE_1009 Rhodopseudomonas palustris BisA53 RTX toxins and related Ca2+-binding proteins-like protein YP_779945.1 1131242 D 316055 CDS YP_779946.1 115523035 4359811 1133468..1134826 1 NC_008435.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rpd:RPD_1563 type I secretion membrane fusion protein, HlyD; HlyD family type I secretion membrane fusion protein 1134826 4359811 RPE_1010 Rhodopseudomonas palustris BisA53 HlyD family type I secretion membrane fusion protein YP_779946.1 1133468 D 316055 CDS YP_779947.1 115523036 4359812 1135061..1135324 1 NC_008435.1 hypothetical protein 1135324 4359812 RPE_1011 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779947.1 1135061 D 316055 CDS YP_779948.1 115523037 4359813 1135499..1135801 1 NC_008435.1 hypothetical protein 1135801 4359813 RPE_1012 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779948.1 1135499 D 316055 CDS YP_779949.1 115523038 4359814 complement(1136248..1137051) 1 NC_008435.1 KEGG: atc:AGR_pAT_139 hypothetical protein; hypothetical protein 1137051 4359814 RPE_1013 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779949.1 1136248 R 316055 CDS YP_779950.1 115523039 4359815 1137151..1137549 1 NC_008435.1 PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr0034 putative transposase; transposase IS3/IS911 family protein 1137549 4359815 RPE_1014 Rhodopseudomonas palustris BisA53 transposase IS3/IS911 family protein YP_779950.1 1137151 D 316055 CDS YP_779951.1 115523040 4359816 1137546..1137893 1 NC_008435.1 PFAM: IS66 Orf2 family protein; KEGG: mag:amb0402 transposase and inactivated derivative; IS66 Orf2 family protein 1137893 4359816 RPE_1015 Rhodopseudomonas palustris BisA53 IS66 Orf2 family protein YP_779951.1 1137546 D 316055 CDS YP_779952.1 115523041 4359817 1137967..1139553 1 NC_008435.1 PFAM: transposase IS66; KEGG: mag:amb3325 transposase and inactivated derivative; transposase IS66 1139553 4359817 RPE_1016 Rhodopseudomonas palustris BisA53 transposase IS66 YP_779952.1 1137967 D 316055 CDS YP_779953.1 115523042 4359818 complement(1139971..1147383) 1 NC_008435.1 hypothetical protein 1147383 4359818 RPE_1017 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779953.1 1139971 R 316055 CDS YP_779954.1 115523043 4359819 1148500..1148868 1 NC_008435.1 KEGG: bja:blr6106 hypothetical protein; hypothetical protein 1148868 4359819 RPE_1018 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779954.1 1148500 D 316055 CDS YP_779955.1 115523044 4359767 1150352..1154368 1 NC_008435.1 KEGG: rpd:RPD_3942 hypothetical protein; hypothetical protein 1154368 4359767 RPE_1019 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779955.1 1150352 D 316055 CDS YP_779956.1 115523045 4359768 1154432..1155658 1 NC_008435.1 KEGG: rpd:RPD_3943 hypothetical protein; hypothetical protein 1155658 4359768 RPE_1020 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779956.1 1154432 D 316055 CDS YP_779957.1 115523046 4359769 1155655..1156650 1 NC_008435.1 KEGG: rpd:RPD_3944 hypothetical protein; hypothetical protein 1156650 4359769 RPE_1021 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779957.1 1155655 D 316055 CDS YP_779958.1 115523047 4359770 complement(1156790..1158511) 1 NC_008435.1 PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: rpd:RPD_3945 protein of unknown function DUF262; hypothetical protein 1158511 4359770 RPE_1022 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779958.1 1156790 R 316055 CDS YP_779959.1 115523048 4359772 complement(1159758..1160027) 1 NC_008435.1 PFAM: Conjugal transfer TraD family protein; KEGG: rpd:RPD_3948 conjugal transfer TraD; conjugal transfer TraD family protein 1160027 4359772 RPE_1024 Rhodopseudomonas palustris BisA53 conjugal transfer TraD family protein YP_779959.1 1159758 R 316055 CDS YP_779960.1 115523049 4359773 complement(1160029..1160355) 1 NC_008435.1 KEGG: rpd:RPD_3949 hypothetical protein; hypothetical protein 1160355 4359773 RPE_1025 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779960.1 1160029 R 316055 CDS YP_779961.1 115523050 4359774 1160526..1163546 1 NC_008435.1 MobA/MobL family protein; conjugal transfer relaxase TraA 1163546 4359774 RPE_1026 Rhodopseudomonas palustris BisA53 conjugal transfer relaxase TraA YP_779961.1 1160526 D 316055 CDS YP_779962.1 115523051 4359775 1163665..1163880 1 NC_008435.1 PFAM: Prophage CP4-57 regulatory; KEGG: rpc:RPC_4521 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA 1163880 4359775 RPE_1027 Rhodopseudomonas palustris BisA53 phage transcriptional regulator, AlpA YP_779962.1 1163665 D 316055 CDS YP_779963.1 115523052 4359776 1164133..1164348 1 NC_008435.1 hypothetical protein 1164348 4359776 RPE_1028 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779963.1 1164133 D 316055 CDS YP_779964.1 115523053 4359777 1164531..1165619 1 NC_008435.1 KEGG: hch:HCH_01988 probable phage protein; hypothetical protein 1165619 4359777 RPE_1029 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779964.1 1164531 D 316055 CDS YP_779965.1 115523054 4359778 1165607..1166107 1 NC_008435.1 KEGG: hch:HCH_10007 putative threonine efflux protein; putative threonine efflux protein 1166107 4359778 RPE_1030 Rhodopseudomonas palustris BisA53 putative threonine efflux protein YP_779965.1 1165607 D 316055 CDS YP_779966.1 115523055 4359779 1166104..1167984 1 NC_008435.1 KEGG: hch:HCH_01987 probable phage protein; hypothetical protein 1167984 4359779 RPE_1031 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779966.1 1166104 D 316055 CDS YP_779967.1 115523056 4359780 1168225..1168902 1 NC_008435.1 KEGG: nha:Nham_2758 transposase, IS4; transposase, IS4 1168902 4359780 RPE_1032 Rhodopseudomonas palustris BisA53 transposase, IS4 YP_779967.1 1168225 D 316055 CDS YP_779968.1 115523057 4359781 1168899..1169579 1 NC_008435.1 PFAM: transposase, IS4 family protein; KEGG: nha:Nham_2758 transposase, IS4; transposase, IS4 family protein 1169579 4359781 RPE_1033 Rhodopseudomonas palustris BisA53 transposase, IS4 family protein YP_779968.1 1168899 D 316055 CDS YP_779969.1 115523058 4359782 complement(1169721..1172087) 1 NC_008435.1 hypothetical protein 1172087 4359782 RPE_1034 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779969.1 1169721 R 316055 CDS YP_779970.1 115523059 4359783 1172172..1172639 1 NC_008435.1 KEGG: rpc:RPC_0991 hypothetical protein; hypothetical protein 1172639 4359783 RPE_1035 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779970.1 1172172 D 316055 CDS YP_779971.1 115523060 4359872 1172778..1174406 1 NC_008435.1 PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: rpc:RPC_0990 recombinase; recombinase 1174406 4359872 RPE_1036 Rhodopseudomonas palustris BisA53 recombinase YP_779971.1 1172778 D 316055 CDS YP_779972.1 115523061 4359874 complement(1174540..1174899) 1 NC_008435.1 KEGG: rpc:RPC_0989 hypothetical protein; hypothetical protein 1174899 4359874 RPE_1037 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779972.1 1174540 R 316055 CDS YP_779973.1 115523062 4359875 complement(1174942..1175580) 1 NC_008435.1 PFAM: putative methyltransferase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_0988 phosphatidylethanolamine N-methyltransferase; phosphatidylethanolamine N-methyltransferase 1175580 4359875 RPE_1038 Rhodopseudomonas palustris BisA53 phosphatidylethanolamine N-methyltransferase YP_779973.1 1174942 R 316055 CDS YP_779974.1 115523063 4359876 complement(1175599..1176858) 1 NC_008435.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1176858 mnmA 4359876 mnmA Rhodopseudomonas palustris BisA53 tRNA-specific 2-thiouridylase MnmA YP_779974.1 1175599 R 316055 CDS YP_779975.1 115523064 4359877 1177107..1178651 1 NC_008435.1 PFAM: flagellar hook-length control protein; KEGG: rpc:RPC_0986 flagellar hook-length control protein; flagellar hook-length control protein 1178651 4359877 RPE_1040 Rhodopseudomonas palustris BisA53 flagellar hook-length control protein YP_779975.1 1177107 D 316055 CDS YP_779976.1 115523065 4359878 1178661..1179392 1 NC_008435.1 PFAM: flagellar hook capping protein; KEGG: rpc:RPC_0985 flagellar hook capping protein; flagellar hook capping protein 1179392 4359878 RPE_1041 Rhodopseudomonas palustris BisA53 flagellar hook capping protein YP_779976.1 1178661 D 316055 CDS YP_779977.1 115523066 4359879 complement(1179413..1180222) 1 NC_008435.1 TIGRFAM: lytic murein transglycosylase; KEGG: rpc:RPC_0984 lytic murein transglycosylase; lytic murein transglycosylase 1180222 4359879 RPE_1042 Rhodopseudomonas palustris BisA53 lytic murein transglycosylase YP_779977.1 1179413 R 316055 CDS YP_779978.1 115523067 4359880 1180343..1180708 1 NC_008435.1 KEGG: rpb:RPB_4120 hypothetical protein; hypothetical protein 1180708 4359880 RPE_1043 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779978.1 1180343 D 316055 CDS YP_779979.1 115523068 4359881 1180852..1181211 1 NC_008435.1 KEGG: bbr:BB0831 hypothetical protein; hypothetical protein 1181211 4359881 RPE_1044 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779979.1 1180852 D 316055 CDS YP_779980.1 115523069 4359882 1181218..1181709 1 NC_008435.1 KEGG: gvi:gll1315 hypothetical protein; hypothetical protein 1181709 4359882 RPE_1045 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779980.1 1181218 D 316055 CDS YP_779981.1 115523070 4359883 complement(1183070..1183432) 1 NC_008435.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: rpc:RPC_0980 cupin 2, conserved barrel; cupin 1183432 4359883 RPE_1046 Rhodopseudomonas palustris BisA53 cupin YP_779981.1 1183070 R 316055 CDS YP_779982.1 115523071 4359884 complement(1183548..1184246) 1 NC_008435.1 KEGG: rpd:RPD_0618 cytochrome c, class I; cytochrome c553-like protein 1184246 4359884 RPE_1047 Rhodopseudomonas palustris BisA53 cytochrome c553-like protein YP_779982.1 1183548 R 316055 CDS YP_779983.1 115523072 4359885 complement(1184455..1185708) 1 NC_008435.1 KEGG: rpd:RPD_0619 putative L-sorbosone dehydrogenase; putative L-sorbosone dehydrogenase 1185708 4359885 RPE_1048 Rhodopseudomonas palustris BisA53 putative L-sorbosone dehydrogenase YP_779983.1 1184455 R 316055 CDS YP_779984.1 115523073 4359886 1186084..1186503 1 NC_008435.1 KEGG: rpc:RPC_0979 hypothetical protein; hypothetical protein 1186503 4359886 RPE_1049 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779984.1 1186084 D 316055 CDS YP_779985.1 115523074 4359887 complement(1186516..1186887) 1 NC_008435.1 KEGG: rpb:RPB_4124 hypothetical protein; hypothetical protein 1186887 4359887 RPE_1050 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779985.1 1186516 R 316055 CDS YP_779986.1 115523075 4359888 complement(1188646..1188882) 1 NC_008435.1 KEGG: mlo:mll9021 transposase; transposase 1188882 4359888 RPE_1051 Rhodopseudomonas palustris BisA53 transposase YP_779986.1 1188646 R 316055 CDS YP_779987.1 115523076 4358984 complement(1189127..1190875) 1 NC_008435.1 PFAM: Integrase, catalytic region; KEGG: sme:SMb20905 putative transposase protein; integrase catalytic subunit 1190875 4358984 RPE_1052 Rhodopseudomonas palustris BisA53 integrase catalytic subunit YP_779987.1 1189127 R 316055 CDS YP_779988.1 115523077 4358986 complement(1192341..1192640) 1 NC_008435.1 KEGG: rpa:RPA1289 hypothetical protein; hypothetical protein 1192640 4358986 RPE_1054 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779988.1 1192341 R 316055 CDS YP_779989.1 115523078 4358987 complement(1192713..1194827) 1 NC_008435.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 1194827 4358987 RPE_1055 Rhodopseudomonas palustris BisA53 RNA polymerase sigma factor RpoD YP_779989.1 1192713 R 316055 CDS YP_779990.1 115523079 4358988 complement(1195093..1197159) 1 NC_008435.1 synthesizes RNA primers at the replication forks; DNA primase 1197159 dnaG 4358988 dnaG Rhodopseudomonas palustris BisA53 DNA primase YP_779990.1 1195093 R 316055 CDS YP_779991.1 115523080 4358989 complement(1197249..1197518) 1 NC_008435.1 KEGG: rpc:RPC_0969 hypothetical protein; hypothetical protein 1197518 4358989 RPE_1057 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779991.1 1197249 R 316055 CDS YP_779992.1 115523081 4358990 complement(1197584..1197979) 1 NC_008435.1 KEGG: rpd:RPD_3977 hypothetical protein; hypothetical protein 1197979 4358990 RPE_1058 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779992.1 1197584 R 316055 CDS YP_779993.1 115523082 4358991 1198163..1199002 1 NC_008435.1 PFAM: N-formylglutamate amidohydrolase; KEGG: rpc:RPC_0966 N-formylglutamate amidohydrolase; N-formylglutamate amidohydrolase 1199002 4358991 RPE_1059 Rhodopseudomonas palustris BisA53 N-formylglutamate amidohydrolase YP_779993.1 1198163 D 316055 CDS YP_779994.1 115523083 4358992 complement(1199336..1199641) 1 NC_008435.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor 1199641 clpS 4358992 clpS Rhodopseudomonas palustris BisA53 ATP-dependent Clp protease adaptor YP_779994.1 1199336 R 316055 CDS YP_779995.1 115523084 4358993 1199834..1200691 1 NC_008435.1 PFAM: protein of unknown function DUF1194; KEGG: rpc:RPC_1144 protein of unknown function DUF1194; hypothetical protein 1200691 4358993 RPE_1061 Rhodopseudomonas palustris BisA53 hypothetical protein YP_779995.1 1199834 D 316055 CDS YP_779996.1 115523085 4358994 complement(1200874..1202109) 1 NC_008435.1 KEGG: rpc:RPC_1145 RNA methyltransferase; RNA methyltransferase 1202109 4358994 RPE_1062 Rhodopseudomonas palustris BisA53 RNA methyltransferase YP_779996.1 1200874 R 316055 CDS YP_779997.1 115523086 4358995 complement(1202155..1203567) 1 NC_008435.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rpa:RPA0949 putative multidrug efflux protein (NorM); MATE efflux family protein 1203567 4358995 RPE_1063 Rhodopseudomonas palustris BisA53 MATE efflux family protein YP_779997.1 1202155 R 316055 CDS YP_779998.1 115523087 4358996 complement(1203630..1204370) 1 NC_008435.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: bja:bll2649 putative hemolysin; hemolysin A 1204370 4358996 RPE_1064 Rhodopseudomonas palustris BisA53 hemolysin A YP_779998.1 1203630 R 316055 CDS YP_779999.1 115523088 4358997 complement(1204383..1204955) 1 NC_008435.1 PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: rpd:RPD_4306 nucleoside 2-deoxyribosyltransferase; nucleoside 2-deoxyribosyltransferase 1204955 4358997 RPE_1065 Rhodopseudomonas palustris BisA53 nucleoside 2-deoxyribosyltransferase YP_779999.1 1204383 R 316055 CDS YP_780000.1 115523089 4358998 1205016..1205786 1 NC_008435.1 hypothetical protein 1205786 4358998 RPE_1066 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780000.1 1205016 D 316055 CDS YP_780001.1 115523090 4358999 complement(1205806..1207728) 1 NC_008435.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1207728 4358999 RPE_1067 Rhodopseudomonas palustris BisA53 1-deoxy-D-xylulose-5-phosphate synthase YP_780001.1 1205806 R 316055 CDS YP_780002.1 115523091 4359000 complement(1208241..1208486) 1 NC_008435.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1208486 4359000 RPE_1068 Rhodopseudomonas palustris BisA53 exodeoxyribonuclease VII small subunit YP_780002.1 1208241 R 316055 CDS YP_780003.1 115523092 4360030 complement(1208619..1209548) 1 NC_008435.1 PFAM: histone deacetylase superfamily; KEGG: rpc:RPC_1151 histone deacetylase superfamily; histone deacetylase superfamily protein 1209548 4360030 RPE_1069 Rhodopseudomonas palustris BisA53 histone deacetylase superfamily protein YP_780003.1 1208619 R 316055 CDS YP_780004.1 115523093 4360031 complement(1209640..1211316) 1 NC_008435.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rpc:RPC_1152 5'-nucleotidase-like; 5'-nucleotidase domain-containing protein 1211316 4360031 RPE_1070 Rhodopseudomonas palustris BisA53 5'-nucleotidase domain-containing protein YP_780004.1 1209640 R 316055 CDS YP_780005.1 115523094 4360032 1211470..1211931 1 NC_008435.1 KEGG: rpc:RPC_1153 hypothetical protein; hypothetical protein 1211931 4360032 RPE_1071 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780005.1 1211470 D 316055 CDS YP_780006.1 115523095 4360033 1212038..1214587 1 NC_008435.1 PFAM: Carboxylesterase, type B; protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: rme:Rmet_5225 protein of unknown function DUF1214; carboxylesterase, type B 1214587 4360033 RPE_1072 Rhodopseudomonas palustris BisA53 carboxylesterase, type B YP_780006.1 1212038 D 316055 CDS YP_780007.1 115523096 4360034 complement(1214609..1215370) 1 NC_008435.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpb:RPB_4455 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1215370 4360034 RPE_1073 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase/isomerase YP_780007.1 1214609 R 316055 CDS YP_780008.1 115523097 4360035 complement(1215437..1217218) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpc:RPC_1156 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 1217218 4360035 RPE_1074 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_780008.1 1215437 R 316055 CDS YP_780009.1 115523098 4360037 1217650..1219584 1 NC_008435.1 PFAM: phage integrase family protein; KEGG: nha:Nham_0896 hypothetical protein; phage integrase family protein 1219584 4360037 RPE_1075 Rhodopseudomonas palustris BisA53 phage integrase family protein YP_780009.1 1217650 D 316055 CDS YP_780010.1 115523099 4360038 complement(1220174..1220431) 1 NC_008435.1 hypothetical protein 1220431 4360038 RPE_1076 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780010.1 1220174 R 316055 CDS YP_780011.1 115523100 4360040 complement(1221109..1222656) 1 NC_008435.1 PFAM: Resolvase, N-terminal domain; Recombinase; KEGG: ret:RHE_PA00038 probable insertion sequence transposase protein; recombinase 1222656 4360040 RPE_1078 Rhodopseudomonas palustris BisA53 recombinase YP_780011.1 1221109 R 316055 CDS YP_780012.1 115523101 4360041 1223075..1223362 1 NC_008435.1 KEGG: mag:amb3325 transposase and inactivated derivative; hypothetical protein 1223362 4360041 RPE_1079 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780012.1 1223075 D 316055 CDS YP_780013.1 115523102 4360042 1223359..1223742 1 NC_008435.1 KEGG: mag:amb1129 hypothetical protein; hypothetical protein 1223742 4360042 RPE_1080 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780013.1 1223359 D 316055 CDS YP_780014.1 115523103 4360043 complement(1224242..1225255) 1 NC_008435.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: bmb:BruAb1_1071 GalE-1, UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 1225255 4360043 RPE_1081 Rhodopseudomonas palustris BisA53 UDP-glucose 4-epimerase YP_780014.1 1224242 R 316055 CDS YP_780015.1 115523104 4360044 complement(1225595..1225918) 1 NC_008435.1 hypothetical protein 1225918 4360044 RPE_1082 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780015.1 1225595 R 316055 CDS YP_780016.1 115523105 4360045 complement(1226010..1226762) 1 NC_008435.1 PFAM: metallophosphoesterase; KEGG: bja:bll2356 serine/threonine protein phosphatase I; metallophosphoesterase 1226762 4360045 RPE_1083 Rhodopseudomonas palustris BisA53 metallophosphoesterase YP_780016.1 1226010 R 316055 CDS YP_780017.1 115523106 4360046 1227143..1228918 1 NC_008435.1 PFAM: peptidase C2, calpain; KEGG: ana:all1084 unknown protein; peptidase C2, calpain 1228918 4360046 RPE_1084 Rhodopseudomonas palustris BisA53 peptidase C2, calpain YP_780017.1 1227143 D 316055 CDS YP_780018.1 115523107 4360201 1229279..1231396 1 NC_008435.1 KEGG: bja:bll6293 HlyB/MsbA family ABC transporter; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter, transmembrane region; ABC transporter related; peptidase C39, bacteriocin processing; SMART: AAA ATPase; type I secretion system ATPase 1231396 4360201 RPE_1085 Rhodopseudomonas palustris BisA53 type I secretion system ATPase YP_780018.1 1229279 D 316055 CDS YP_780019.1 115523108 4360202 1231399..1232835 1 NC_008435.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: bja:bll6292 probable Hemolysin secretion protein D; HlyD family type I secretion membrane fusion protein 1232835 4360202 RPE_1086 Rhodopseudomonas palustris BisA53 HlyD family type I secretion membrane fusion protein YP_780019.1 1231399 D 316055 CDS YP_780020.1 115523109 4360203 1233659..1233976 1 NC_008435.1 hypothetical protein 1233976 4360203 RPE_1087 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780020.1 1233659 D 316055 CDS YP_780021.1 115523110 4360204 complement(1234240..1235067) 1 NC_008435.1 KEGG: ppu:PP3128 exopolysaccharide biosynthesis/transport protein, putative; exopolysaccharide biosynthesis/transport protein 1235067 4360204 RPE_1088 Rhodopseudomonas palustris BisA53 exopolysaccharide biosynthesis/transport protein YP_780021.1 1234240 R 316055 CDS YP_780022.1 115523111 4360205 complement(1235103..1236425) 1 NC_008435.1 PFAM: lipopolysaccharide biosynthesis; KEGG: ppu:PP3127 exopolysaccharide transport protein, putative; lipopolysaccharide biosynthesis protein 1236425 4360205 RPE_1089 Rhodopseudomonas palustris BisA53 lipopolysaccharide biosynthesis protein YP_780022.1 1235103 R 316055 CDS YP_780023.1 115523112 4360206 1237442..1238284 1 NC_008435.1 SMART: AAA ATPase; KEGG: sat:SYN_00778 general secretion pathway protein A; ATPase AAA 1238284 4360206 RPE_1090 Rhodopseudomonas palustris BisA53 ATPase AAA YP_780023.1 1237442 D 316055 CDS YP_780024.1 115523113 4360207 1238397..1238969 1 NC_008435.1 PFAM: polysaccharide export protein; KEGG: gme:Gmet_1444 polysaccharide export protein; polysaccharide export protein 1238969 4360207 RPE_1091 Rhodopseudomonas palustris BisA53 polysaccharide export protein YP_780024.1 1238397 D 316055 CDS YP_780025.1 115523114 4360208 1239013..1240236 1 NC_008435.1 hypothetical protein 1240236 4360208 RPE_1092 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780025.1 1239013 D 316055 CDS YP_780026.1 115523115 4360209 complement(1240306..1241196) 1 NC_008435.1 PFAM: sugar transferase; KEGG: bja:blr2358 probable glycosyl transferase; sugar transferase 1241196 4360209 RPE_1093 Rhodopseudomonas palustris BisA53 sugar transferase YP_780026.1 1240306 R 316055 CDS YP_780027.1 115523116 4360210 complement(1242247..1244454) 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: jan:Jann_4236 tetratricopeptide TPR_2; hypothetical protein 1244454 4360210 RPE_1094 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780027.1 1242247 R 316055 CDS YP_780028.1 115523117 4360211 complement(1244664..1246286) 1 NC_008435.1 TIGRFAM: eight transmembrane protein EpsH; KEGG: gme:Gmet_1503 hypothetical protein; eight transmembrane protein EpsH 1246286 4360211 RPE_1095 Rhodopseudomonas palustris BisA53 eight transmembrane protein EpsH YP_780028.1 1244664 R 316055 CDS YP_780029.1 115523118 4360212 complement(1246283..1247416) 1 NC_008435.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; glycosyl transferase WecB/TagA/CpsF; KEGG: gka:GK3311 teichoic acid biosynthesis; anti-sigma-factor antagonist 1247416 4360212 RPE_1096 Rhodopseudomonas palustris BisA53 anti-sigma-factor antagonist YP_780029.1 1246283 R 316055 CDS YP_780030.1 115523119 4360213 complement(1247883..1249088) 1 NC_008435.1 PFAM: glycosyl transferase, family 2; KEGG: ppu:PP3140 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 1249088 4360213 RPE_1097 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_780030.1 1247883 R 316055 CDS YP_780031.1 115523120 4360214 complement(1249262..1250233) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: ccr:CC1146 NAD-dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 1250233 4360214 RPE_1098 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_780031.1 1249262 R 316055 CDS YP_780032.1 115523121 4360215 complement(1250681..1251439) 1 NC_008435.1 TIGRFAM: methyltransferase FkbM family; KEGG: fra:Francci3_4064 methyltransferase FkbM; FkbM family methyltransferase 1251439 4360215 RPE_1099 Rhodopseudomonas palustris BisA53 FkbM family methyltransferase YP_780032.1 1250681 R 316055 CDS YP_780033.1 115523122 4360216 complement(1251718..1252446) 1 NC_008435.1 KEGG: mca:MCA1423 glycosyl transferase, family 25; glycosyl transferase family protein 1252446 4360216 RPE_1100 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_780033.1 1251718 R 316055 CDS YP_780034.1 115523123 4360217 complement(1252644..1253846) 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: ppu:PP3139 glycosyl transferase, group 1 family protein; group 1 glycosyl transferase 1253846 4360217 RPE_1101 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_780034.1 1252644 R 316055 CDS YP_780035.1 115523124 4359732 complement(1253859..1254890) 1 NC_008435.1 PFAM: glycosyl transferase, family 2; KEGG: ppu:PP3137 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 1254890 4359732 RPE_1102 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_780035.1 1253859 R 316055 CDS YP_780036.1 115523125 4359733 complement(1254880..1256016) 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: ava:Ava_0842 glycosyl transferase, group 1; group 1 glycosyl transferase 1256016 4359733 RPE_1103 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_780036.1 1254880 R 316055 CDS YP_780037.1 115523126 4359734 1256372..1256896 1 NC_008435.1 KEGG: nwi:Nwi_0542 hypothetical protein; hypothetical protein 1256896 4359734 RPE_1104 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780037.1 1256372 D 316055 CDS YP_780038.1 115523127 4359735 complement(1256962..1258311) 1 NC_008435.1 hypothetical protein 1258311 4359735 RPE_1105 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780038.1 1256962 R 316055 CDS YP_780039.1 115523128 4359736 1258568..1258849 1 NC_008435.1 hypothetical protein 1258849 4359736 RPE_1106 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780039.1 1258568 D 316055 CDS YP_780040.1 115523129 4359737 1258859..1260208 1 NC_008435.1 hypothetical protein 1260208 4359737 RPE_1107 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780040.1 1258859 D 316055 CDS YP_780041.1 115523130 4359739 1260952..1263954 1 NC_008435.1 KEGG: xcc:XCC1752 cellulase; hypothetical protein 1263954 4359739 RPE_1109 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780041.1 1260952 D 316055 CDS YP_780042.1 115523131 4359740 complement(1263917..1264984) 1 NC_008435.1 PFAM: acyltransferase 3; KEGG: ade:Adeh_2069 acyltransferase 3; acyltransferase 3 1264984 4359740 RPE_1110 Rhodopseudomonas palustris BisA53 acyltransferase 3 YP_780042.1 1263917 R 316055 CDS YP_780043.1 115523132 4359741 complement(1265110..1266177) 1 NC_008435.1 PFAM: acyltransferase 3; KEGG: atc:AGR_L_3583 exopolysaccharide production protein ExoZ; acyltransferase 3 1266177 4359741 RPE_1111 Rhodopseudomonas palustris BisA53 acyltransferase 3 YP_780043.1 1265110 R 316055 CDS YP_780044.1 115523133 4359742 complement(1266804..1267322) 1 NC_008435.1 hypothetical protein 1267322 4359742 RPE_1112 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780044.1 1266804 R 316055 CDS YP_780045.1 115523134 4359743 1268149..1268928 1 NC_008435.1 TIGRFAM: methyltransferase FkbM family; KEGG: nwi:Nwi_2400 methyltransferase FkbM; FkbM family methyltransferase 1268928 4359743 RPE_1113 Rhodopseudomonas palustris BisA53 FkbM family methyltransferase YP_780045.1 1268149 D 316055 CDS YP_780046.1 115523135 4359744 1269132..1270130 1 NC_008435.1 PFAM: acyltransferase 3; KEGG: ppu:PP2377 acetyltransferase Act, putative; acyltransferase 3 1270130 4359744 RPE_1114 Rhodopseudomonas palustris BisA53 acyltransferase 3 YP_780046.1 1269132 D 316055 CDS YP_780047.1 115523136 4359745 complement(1270157..1271254) 1 NC_008435.1 KEGG: syn:slr0386 hypothetical protein; hypothetical protein 1271254 4359745 RPE_1115 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780047.1 1270157 R 316055 CDS YP_780048.1 115523137 4359746 complement(1271259..1272749) 1 NC_008435.1 PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: dar:Daro_2421 membrane bound O-acyl transferase, MBOAT; membrane bound O-acyl transferase, MBOAT family protein 1272749 4359746 RPE_1116 Rhodopseudomonas palustris BisA53 membrane bound O-acyl transferase, MBOAT family protein YP_780048.1 1271259 R 316055 CDS YP_780049.1 115523138 4359747 complement(1272943..1273431) 1 NC_008435.1 KEGG: nha:Nham_4212 integrase, catalytic region; integrase, catalytic region 1273431 4359747 RPE_1117 Rhodopseudomonas palustris BisA53 integrase, catalytic region YP_780049.1 1272943 R 316055 CDS YP_780050.1 115523139 4359748 complement(1273723..1274121) 1 NC_008435.1 KEGG: nha:Nham_4211 transposase IS3/IS911; hypothetical protein 1274121 4359748 RPE_1118 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780050.1 1273723 R 316055 CDS YP_780051.1 115523140 4359749 1274506..1274772 1 NC_008435.1 hypothetical protein 1274772 4359749 RPE_1119 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780051.1 1274506 D 316055 CDS YP_780052.1 115523141 4358695 1275093..1276400 1 NC_008435.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bja:bll8129 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 1276400 4358695 RPE_1120 Rhodopseudomonas palustris BisA53 UDP-glucose 6-dehydrogenase YP_780052.1 1275093 D 316055 CDS YP_780053.1 115523142 4358696 1279202..1279687 1 NC_008435.1 PFAM: regulatory protein, LuxR; KEGG: rpd:RPD_2373 regulatory protein, LuxR; LuxR family transcriptional regulator 1279687 4358696 RPE_1121 Rhodopseudomonas palustris BisA53 LuxR family transcriptional regulator YP_780053.1 1279202 D 316055 CDS YP_780054.1 115523143 4358697 complement(1279766..1280068) 1 NC_008435.1 PFAM: type IV pilus assembly PilZ; KEGG: rpd:RPD_3053 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1280068 4358697 RPE_1122 Rhodopseudomonas palustris BisA53 type IV pilus assembly PilZ YP_780054.1 1279766 R 316055 CDS YP_780055.1 115523144 4358698 complement(1280181..1281104) 1 NC_008435.1 KEGG: bja:bll6535 hypothetical protein; hypothetical protein 1281104 4358698 RPE_1123 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780055.1 1280181 R 316055 CDS YP_780056.1 115523145 4358699 complement(1281447..1281818) 1 NC_008435.1 KEGG: rpa:RPA4550 hypothetical protein; hypothetical protein 1281818 4358699 RPE_1124 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780056.1 1281447 R 316055 CDS YP_780057.1 115523146 4358700 complement(1283506..1285092) 1 NC_008435.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpb:RPB_3063 ATPase; ATPase 1285092 4358700 RPE_1125 Rhodopseudomonas palustris BisA53 ATPase YP_780057.1 1283506 R 316055 CDS YP_780058.1 115523147 4358701 complement(1285089..1285487) 1 NC_008435.1 KEGG: rpb:RPB_3062 hypothetical protein; hypothetical protein 1285487 4358701 RPE_1126 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780058.1 1285089 R 316055 CDS YP_780059.1 115523148 4358702 complement(1286101..1286880) 1 NC_008435.1 KEGG: rpb:RPB_3061 hypothetical protein; hypothetical protein 1286880 4358702 RPE_1127 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780059.1 1286101 R 316055 CDS YP_780060.1 115523149 4358703 complement(1286891..1287460) 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_3060 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 1287460 4358703 RPE_1128 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_780060.1 1286891 R 316055 CDS YP_780061.1 115523150 4358704 complement(1287789..1288100) 1 NC_008435.1 KEGG: rpb:RPB_3059 hypothetical protein; hypothetical protein 1288100 4358704 RPE_1129 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780061.1 1287789 R 316055 CDS YP_780062.1 115523151 4358705 complement(1288378..1288764) 1 NC_008435.1 hypothetical protein 1288764 4358705 RPE_1130 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780062.1 1288378 R 316055 CDS YP_780063.1 115523152 4358706 1289374..1289784 1 NC_008435.1 PFAM: transposase IS3/IS911 family protein; KEGG: nha:Nham_2997 transposase IS3/IS911; transposase IS3/IS911 family protein 1289784 4358706 RPE_1131 Rhodopseudomonas palustris BisA53 transposase IS3/IS911 family protein YP_780063.1 1289374 D 316055 CDS YP_780064.1 115523153 4358707 1289953..1290351 1 NC_008435.1 PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr0034 putative transposase; transposase IS3/IS911 family protein 1290351 4358707 RPE_1132 Rhodopseudomonas palustris BisA53 transposase IS3/IS911 family protein YP_780064.1 1289953 D 316055 CDS YP_780065.1 115523154 4358708 1290348..1290695 1 NC_008435.1 PFAM: IS66 Orf2 family protein; KEGG: mag:amb0402 transposase and inactivated derivative; IS66 Orf2 family protein 1290695 4358708 RPE_1133 Rhodopseudomonas palustris BisA53 IS66 Orf2 family protein YP_780065.1 1290348 D 316055 CDS YP_780066.1 115523155 4358709 1290769..1292355 1 NC_008435.1 PFAM: transposase IS66; KEGG: mag:amb3325 transposase and inactivated derivative; transposase IS66 1292355 4358709 RPE_1134 Rhodopseudomonas palustris BisA53 transposase IS66 YP_780066.1 1290769 D 316055 CDS YP_780067.1 115523156 4358710 complement(1292523..1292906) 1 NC_008435.1 KEGG: mag:amb1129 hypothetical protein; hypothetical protein 1292906 4358710 RPE_1135 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780067.1 1292523 R 316055 CDS YP_780068.1 115523157 4358711 complement(1292903..1293190) 1 NC_008435.1 KEGG: mag:amb3325 transposase and inactivated derivative; hypothetical protein 1293190 4358711 RPE_1136 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780068.1 1292903 R 316055 CDS YP_780069.1 115523158 4357705 1293722..1293991 1 NC_008435.1 KEGG: atc:AGR_L_547 hypothetical protein; hypothetical protein 1293991 4357705 RPE_1137 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780069.1 1293722 D 316055 CDS YP_780070.1 115523159 4357706 complement(1294046..1296043) 1 NC_008435.1 KEGG: hch:HCH_02732 predicted acyltransferase; hypothetical protein 1296043 4357706 RPE_1138 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780070.1 1294046 R 316055 CDS YP_780071.1 115523160 4357707 complement(1298629..1299189) 1 NC_008435.1 KEGG: nha:Nham_4483 ArdC gene in pSa(IncW plasmid)-like; hypothetical protein 1299189 4357707 RPE_1139 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780071.1 1298629 R 316055 CDS YP_780072.1 115523161 4357708 complement(1299217..1299711) 1 NC_008435.1 KEGG: rpc:RPC_3939 transposase, mutator type; transposase, mutator type 1299711 4357708 RPE_1140 Rhodopseudomonas palustris BisA53 transposase, mutator type YP_780072.1 1299217 R 316055 CDS YP_780073.1 115523162 4357709 1299783..1301633 1 NC_008435.1 PFAM: transposase, mutator type; transposase, IS4 family protein; KEGG: rpc:RPC_3939 transposase, mutator type; transposase, mutator type 1301633 4357709 RPE_1141 Rhodopseudomonas palustris BisA53 transposase, mutator type YP_780073.1 1299783 D 316055 CDS YP_780074.1 115523163 4357710 1301661..1301900 1 NC_008435.1 KEGG: bja:blr3893 putative transposase; hypothetical protein 1301900 4357710 RPE_1142 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780074.1 1301661 D 316055 CDS YP_780075.1 115523164 4357711 complement(1302584..1303372) 1 NC_008435.1 hypothetical protein 1303372 4357711 RPE_1143 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780075.1 1302584 R 316055 CDS YP_780076.1 115523165 4357712 1303525..1303812 1 NC_008435.1 KEGG: rpc:RPC_3552 hypothetical protein; hypothetical protein 1303812 4357712 RPE_1144 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780076.1 1303525 D 316055 CDS YP_780077.1 115523166 4357713 1303813..1304310 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA4135 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1304310 4357713 RPE_1145 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_780077.1 1303813 D 316055 CDS YP_780078.1 115523167 4357714 complement(1304368..1305699) 1 NC_008435.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 1305699 fliI 4357714 fliI Rhodopseudomonas palustris BisA53 flagellum-specific ATP synthase YP_780078.1 1304368 R 316055 CDS YP_780079.1 115523168 4357715 complement(1305727..1306458) 1 NC_008435.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgF 1306458 flgF 4357715 flgF Rhodopseudomonas palustris BisA53 flagellar basal body rod protein FlgF YP_780079.1 1305727 R 316055 CDS YP_780080.1 115523169 4357716 complement(1306464..1307237) 1 NC_008435.1 PFAM: protein of unknown function DUF1217; KEGG: bja:blr6883 hypothetical protein; hypothetical protein 1307237 4357716 RPE_1148 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780080.1 1306464 R 316055 CDS YP_780081.1 115523170 4357717 1307451..1308302 1 NC_008435.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 1308302 4357717 RPE_1149 Rhodopseudomonas palustris BisA53 flagellar motor protein MotA YP_780081.1 1307451 D 316055 CDS YP_780082.1 115523171 4357718 1308410..1309237 1 NC_008435.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: rpc:RPC_1089 flagellar motor switch protein FliM; flagellar motor switch protein FliM 1309237 4357718 RPE_1150 Rhodopseudomonas palustris BisA53 flagellar motor switch protein FliM YP_780082.1 1308410 D 316055 CDS YP_780083.1 115523172 4357719 1309218..1309505 1 NC_008435.1 KEGG: rpc:RPC_1090 hypothetical protein; hypothetical protein 1309505 4357719 RPE_1151 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780083.1 1309218 D 316055 CDS YP_780084.1 115523173 4357720 1309557..1309955 1 NC_008435.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rpc:RPC_1091 surface presentation of antigens (SpoA) protein; flagellar motor switch protein FliN 1309955 4357720 RPE_1152 Rhodopseudomonas palustris BisA53 flagellar motor switch protein FliN YP_780084.1 1309557 D 316055 CDS YP_780085.1 115523174 4357721 1309968..1311002 1 NC_008435.1 PFAM: flagellar motor switch protein FliG; KEGG: rpc:RPC_1092 flagellar motor switch protein FliG; flagellar motor switch protein FliG 1311002 4357721 RPE_1153 Rhodopseudomonas palustris BisA53 flagellar motor switch protein FliG YP_780085.1 1309968 D 316055 CDS YP_780086.1 115523175 4357722 1311015..1312091 1 NC_008435.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis protein FlhB 1312091 flhB 4357722 flhB Rhodopseudomonas palustris BisA53 flagellar biosynthesis protein FlhB YP_780086.1 1311015 D 316055 CDS YP_780087.1 115523176 4359036 1312368..1312772 1 NC_008435.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; flagellar basal body rod protein FlgB 1312772 flgB 4359036 flgB Rhodopseudomonas palustris BisA53 flagellar basal body rod protein FlgB YP_780087.1 1312368 D 316055 CDS YP_780088.1 115523177 4359037 1312784..1313200 1 NC_008435.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgC 1313200 flgC 4359037 flgC Rhodopseudomonas palustris BisA53 flagellar basal body rod protein FlgC YP_780088.1 1312784 D 316055 CDS YP_780089.1 115523178 4359038 1313203..1313523 1 NC_008435.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar hook-basal body protein FliE 1313523 fliE 4359038 fliE Rhodopseudomonas palustris BisA53 flagellar hook-basal body protein FliE YP_780089.1 1313203 D 316055 CDS YP_780090.1 115523179 4359039 1313532..1314320 1 NC_008435.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod protein FlgG 1314320 flgG 4359039 flgG Rhodopseudomonas palustris BisA53 flagellar basal body rod protein FlgG YP_780090.1 1313532 D 316055 CDS YP_780091.1 115523180 4359040 1314336..1314821 1 NC_008435.1 required for the assembly of the flagellar basal body P-ring; Bradyrhizobium japonicum has two types of flagella, a single thick flagella and a few thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body P-ring biosynthesis protein FlgA 1314821 flgA 4359040 flgA Rhodopseudomonas palustris BisA53 flagellar basal body P-ring biosynthesis protein FlgA YP_780091.1 1314336 D 316055 CDS YP_780092.1 115523181 4359041 1314818..1315921 1 NC_008435.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar basal body P-ring protein 1315921 flgI 4359041 flgI Rhodopseudomonas palustris BisA53 flagellar basal body P-ring protein YP_780092.1 1314818 D 316055 CDS YP_780093.1 115523182 4359042 1315987..1316664 1 NC_008435.1 KEGG: rpc:RPC_1100 hypothetical protein; hypothetical protein 1316664 4359042 RPE_1161 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780093.1 1315987 D 316055 CDS YP_780094.1 115523183 4359043 1316661..1317365 1 NC_008435.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar basal body L-ring protein 1317365 flgH 4359043 flgH Rhodopseudomonas palustris BisA53 flagellar basal body L-ring protein YP_780094.1 1316661 D 316055 CDS YP_780095.1 115523184 4359044 1317365..1317856 1 NC_008435.1 PFAM: flagellar basal body-associated protein FliL; KEGG: rpc:RPC_1102 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 1317856 4359044 RPE_1163 Rhodopseudomonas palustris BisA53 flagellar basal body-associated protein FliL YP_780095.1 1317365 D 316055 CDS YP_780096.1 115523185 4359045 1317853..1318587 1 NC_008435.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagellum; flagellar biosynthesis protein FliP 1318587 fliP 4359045 fliP Rhodopseudomonas palustris BisA53 flagellar biosynthesis protein FliP YP_780096.1 1317853 D 316055 CDS YP_780097.1 115523186 4359046 1318789..1319718 1 NC_008435.1 structural flagella protein; Bradyrhizobium has 2 types of flagella, thick and thin; the proteins in this cluster have been identified as making up the thin flagella and may be involved in swarming; flagellin 1319718 4359046 RPE_1165 Rhodopseudomonas palustris BisA53 flagellin YP_780097.1 1318789 D 316055 CDS YP_780098.1 115523187 4359047 1319852..1321486 1 NC_008435.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1321486 fliF 4359047 fliF Rhodopseudomonas palustris BisA53 flagellar MS-ring protein YP_780098.1 1319852 D 316055 CDS YP_780099.1 115523188 4359048 1321483..1322127 1 NC_008435.1 KEGG: rpc:RPC_1106 hypothetical protein; hypothetical protein 1322127 4359048 RPE_1167 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780099.1 1321483 D 316055 CDS YP_780100.1 115523189 4359049 1322129..1323400 1 NC_008435.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 1323400 motB 4359049 motB Rhodopseudomonas palustris BisA53 flagellar motor protein MotB YP_780100.1 1322129 D 316055 CDS YP_780101.1 115523190 4359050 1323397..1324584 1 NC_008435.1 a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation; chemotaxis protein 1324584 4359050 RPE_1169 Rhodopseudomonas palustris BisA53 chemotaxis protein YP_780101.1 1323397 D 316055 CDS YP_780102.1 115523191 4359051 1324812..1325789 1 NC_008435.1 PFAM: flagellar hook-length control protein; KEGG: rpc:RPC_1109 putative chemotaxis MotD protein; flagellar hook-length control protein 1325789 4359051 RPE_1170 Rhodopseudomonas palustris BisA53 flagellar hook-length control protein YP_780102.1 1324812 D 316055 CDS YP_780103.1 115523192 4359052 1325803..1326318 1 NC_008435.1 PFAM: Lytic transglycosylase, catalytic; KEGG: rpc:RPC_1110 lytic transglycosylase, catalytic; lytic transglycosylase 1326318 4359052 RPE_1171 Rhodopseudomonas palustris BisA53 lytic transglycosylase YP_780103.1 1325803 D 316055 CDS YP_780104.1 115523193 4358897 1326393..1327628 1 NC_008435.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1327628 flgE 4358897 flgE Rhodopseudomonas palustris BisA53 flagellar hook protein FlgE YP_780104.1 1326393 D 316055 CDS YP_780105.1 115523194 4358898 1327659..1329131 1 NC_008435.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 1329131 flgK 4358898 flgK Rhodopseudomonas palustris BisA53 flagellar hook-associated protein FlgK YP_780105.1 1327659 D 316055 CDS YP_780106.1 115523195 4358899 1329136..1330179 1 NC_008435.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar hook-associated protein FlgL 1330179 flgL 4358899 flgL Rhodopseudomonas palustris BisA53 flagellar hook-associated protein FlgL YP_780106.1 1329136 D 316055 CDS YP_780107.1 115523196 4358900 1330216..1330563 1 NC_008435.1 acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis regulatory protein FlaF 1330563 flaF 4358900 flaF Rhodopseudomonas palustris BisA53 flagellar biosynthesis regulatory protein FlaF YP_780107.1 1330216 D 316055 CDS YP_780108.1 115523197 4358901 1330560..1330997 1 NC_008435.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 1330997 flbT 4358901 flbT Rhodopseudomonas palustris BisA53 flagellar biosynthesis repressor FlbT YP_780108.1 1330560 D 316055 CDS YP_780109.1 115523198 4358902 1330999..1331406 1 NC_008435.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella; flagellar basal body rod modification protein 1331406 flgD 4358902 flgD Rhodopseudomonas palustris BisA53 flagellar basal body rod modification protein YP_780109.1 1330999 D 316055 CDS YP_780110.1 115523199 4358903 1331410..1331676 1 NC_008435.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella; flagellar biosynthesis protein FliQ 1331676 fliQ 4358903 fliQ Rhodopseudomonas palustris BisA53 flagellar biosynthesis protein FliQ YP_780110.1 1331410 D 316055 CDS YP_780111.1 115523200 4358904 1331752..1333839 1 NC_008435.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 1333839 flhA 4358904 flhA Rhodopseudomonas palustris BisA53 flagellar biosynthesis protein FlhA YP_780111.1 1331752 D 316055 CDS YP_780112.1 115523201 4358905 1333836..1334582 1 NC_008435.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium has one thick and several thin flagella; the Bradyrhizobium protein in this cluster are associated with the thin flagella; flagellar biosynthesis protein FliR 1334582 fliR 4358905 fliR Rhodopseudomonas palustris BisA53 flagellar biosynthesis protein FliR YP_780112.1 1333836 D 316055 CDS YP_780113.1 115523202 4358906 1334589..1334984 1 NC_008435.1 KEGG: rpc:RPC_1120 hypothetical protein; hypothetical protein 1334984 4358906 RPE_1181 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780113.1 1334589 D 316055 CDS YP_780114.1 115523203 4358907 1335024..1335512 1 NC_008435.1 KEGG: rpc:RPC_1121 hypothetical protein; hypothetical protein 1335512 4358907 RPE_1182 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780114.1 1335024 D 316055 CDS YP_780115.1 115523204 4358908 1335544..1336023 1 NC_008435.1 KEGG: rpc:RPC_1122 hypothetical protein; hypothetical protein 1336023 4358908 RPE_1183 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780115.1 1335544 D 316055 CDS YP_780116.1 115523205 4358909 1336026..1336478 1 NC_008435.1 KEGG: rpc:RPC_1123 hypothetical protein; hypothetical protein 1336478 4358909 RPE_1184 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780116.1 1336026 D 316055 CDS YP_780117.1 115523206 4358910 complement(1336444..1337157) 1 NC_008435.1 PFAM: transcriptional regulator domain protein; KEGG: rpc:RPC_1124 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1337157 4358910 RPE_1185 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_780117.1 1336444 R 316055 CDS YP_780118.1 115523207 4358911 complement(1337846..1338754) 1 NC_008435.1 KEGG: rpc:RPC_1125 hypothetical protein; hypothetical protein 1338754 4358911 RPE_1186 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780118.1 1337846 R 316055 CDS YP_780119.1 115523208 4358912 1338970..1339275 1 NC_008435.1 KEGG: rpc:RPC_1126 hypothetical protein; hypothetical protein 1339275 4358912 RPE_1187 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780119.1 1338970 D 316055 CDS YP_780120.1 115523209 4358913 complement(1339421..1340488) 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: rpc:RPC_3209 glycosyl transferase, group 1; group 1 glycosyl transferase 1340488 4358913 RPE_1188 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_780120.1 1339421 R 316055 CDS YP_780121.1 115523210 4358914 1340982..1343183 1 NC_008435.1 PFAM: Amylo-alpha-1,6-glucosidase; KEGG: rpc:RPC_3211 amylo-alpha-1,6-glucosidase; amylo-alpha-1,6-glucosidase 1343183 4358914 RPE_1189 Rhodopseudomonas palustris BisA53 amylo-alpha-1,6-glucosidase YP_780121.1 1340982 D 316055 CDS YP_780122.1 115523211 4358748 1343352..1344503 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3213 major facilitator superfamily MFS_1; major facilitator transporter 1344503 4358748 RPE_1190 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_780122.1 1343352 D 316055 CDS YP_780123.1 115523212 4358749 1346374..1346673 1 NC_008435.1 hypothetical protein 1346673 4358749 RPE_1191 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780123.1 1346374 D 316055 CDS YP_780124.1 115523213 4358750 1346675..1347040 1 NC_008435.1 PFAM: response regulator receiver; KEGG: gme:Gmet_2428 response regulator receiver domain protein (CheY-like); response regulator receiver protein 1347040 4358750 RPE_1192 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_780124.1 1346675 D 316055 CDS YP_780125.1 115523214 4358751 1347031..1349172 1 NC_008435.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: ccr:CC0433 chemotaxis protein CheA; CheA signal transduction histidine kinase 1349172 4358751 RPE_1193 Rhodopseudomonas palustris BisA53 CheA signal transduction histidine kinase YP_780125.1 1347031 D 316055 CDS YP_780126.1 115523215 4358752 1349222..1349704 1 NC_008435.1 PFAM: CheW domain protein; KEGG: zmo:ZMO0078 chemotaxis protein; CheW protein 1349704 4358752 RPE_1194 Rhodopseudomonas palustris BisA53 CheW protein YP_780126.1 1349222 D 316055 CDS YP_780127.1 115523216 4358753 1349754..1352486 1 NC_008435.1 KEGG: vch:VC0098 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1352486 4358753 RPE_1195 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_780127.1 1349754 D 316055 CDS YP_780128.1 115523217 4358754 1352555..1353382 1 NC_008435.1 PFAM: MCP methyltransferase, CheR-type; KEGG: sde:Sde_3104 biotin biosynthesis protein BioC; chemotaxis protein CheR 1353382 4358754 RPE_1196 Rhodopseudomonas palustris BisA53 chemotaxis protein CheR YP_780128.1 1352555 D 316055 CDS YP_780129.1 115523218 4358755 1353379..1354020 1 NC_008435.1 PFAM: CheD family protein; KEGG: tbd:Tbd_1616 CheD, stimulates methylation of MCP proteins; MCP proteins methylation stimulator CheD 1354020 4358755 RPE_1197 Rhodopseudomonas palustris BisA53 MCP proteins methylation stimulator CheD YP_780129.1 1353379 D 316055 CDS YP_780130.1 115523219 4358756 1354029..1355090 1 NC_008435.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: bpa:BPP1476 protein-glutamate methylesterase; response regulator receiver modulated CheB methylesterase 1355090 4358756 RPE_1198 Rhodopseudomonas palustris BisA53 response regulator receiver modulated CheB methylesterase YP_780130.1 1354029 D 316055 CDS YP_780131.1 115523220 4358757 1355094..1356233 1 NC_008435.1 PFAM: chemotaxis sensory transducer; KEGG: cvi:CV2646 probable methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 1356233 4358757 RPE_1199 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780131.1 1355094 D 316055 CDS YP_780132.1 115523221 4358758 1356243..1356542 1 NC_008435.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mag:amb0579 anti-anti-sigma regulatory factor; anti-sigma-factor antagonist 1356542 4358758 RPE_1200 Rhodopseudomonas palustris BisA53 anti-sigma-factor antagonist YP_780132.1 1356243 D 316055 CDS YP_780133.1 115523222 4358759 1356547..1357203 1 NC_008435.1 KEGG: mag:amb2658 hypothetical protein; putative anti-sigma regulatory factor 1357203 4358759 RPE_1201 Rhodopseudomonas palustris BisA53 putative anti-sigma regulatory factor YP_780133.1 1356547 D 316055 CDS YP_780134.1 115523223 4358760 1357200..1358525 1 NC_008435.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mag:amb2659 serine phosphatase RsbU; response regulator receiver modulated serine phosphatase 1358525 4358760 RPE_1202 Rhodopseudomonas palustris BisA53 response regulator receiver modulated serine phosphatase YP_780134.1 1357200 D 316055 CDS YP_780135.1 115523224 4358761 1358522..1358896 1 NC_008435.1 PFAM: Hpt domain protein; putative CheA signal transduction histidine kinases 1358896 4358761 RPE_1203 Rhodopseudomonas palustris BisA53 putative CheA signal transduction histidine kinases YP_780135.1 1358522 D 316055 CDS YP_780136.1 115523225 4358762 1358896..1362015 1 NC_008435.1 KEGG: dar:Daro_3006 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; multi-sensor hybrid histidine kinase 1362015 4358762 RPE_1204 Rhodopseudomonas palustris BisA53 multi-sensor hybrid histidine kinase YP_780136.1 1358896 D 316055 CDS YP_780137.1 115523226 4358763 complement(1362021..1362857) 1 NC_008435.1 KEGG: rpc:RPC_2950 hypothetical protein; hypothetical protein 1362857 4358763 RPE_1205 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780137.1 1362021 R 316055 CDS YP_780138.1 115523227 4358764 complement(1363151..1363507) 1 NC_008435.1 SMART: Rhodanese domain protein; KEGG: rpb:RPB_1051 rhodanese-like; rhodanese domain-containing protein 1363507 4358764 RPE_1206 Rhodopseudomonas palustris BisA53 rhodanese domain-containing protein YP_780138.1 1363151 R 316055 CDS YP_780139.1 115523228 4358932 1364012..1364539 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rpc:RPC_1923 ubiquinol-cytochrome c reductase, iron-sulfur subunit; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1364539 4358932 RPE_1207 Rhodopseudomonas palustris BisA53 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_780139.1 1364012 D 316055 CDS YP_780140.1 115523229 4358933 1364635..1365012 1 NC_008435.1 KEGG: rpd:RPD_4203 nitrogen fixation-related protein; nitrogen fixation-like protein 1365012 4358933 RPE_1208 Rhodopseudomonas palustris BisA53 nitrogen fixation-like protein YP_780140.1 1364635 D 316055 CDS YP_780141.1 115523230 4358934 1365151..1365465 1 NC_008435.1 hypothetical protein 1365465 4358934 RPE_1209 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780141.1 1365151 D 316055 CDS YP_780142.1 115523231 4358935 complement(1365554..1366918) 1 NC_008435.1 PFAM: VWA containing CoxE family protein; KEGG: rpb:RPB_0718 VWA containing CoxE-like; VWA containing CoxE family protein 1366918 4358935 RPE_1210 Rhodopseudomonas palustris BisA53 VWA containing CoxE family protein YP_780142.1 1365554 R 316055 CDS YP_780143.1 115523232 4358936 complement(1366918..1367865) 1 NC_008435.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpd:RPD_0615 ATPase associated with various cellular activities, AAA_5; ATPase 1367865 4358936 RPE_1211 Rhodopseudomonas palustris BisA53 ATPase YP_780143.1 1366918 R 316055 CDS YP_780144.1 115523233 4358937 complement(1368007..1368837) 1 NC_008435.1 PFAM: PaaX domain protein; PaaX domain protein, C-terminal domain; KEGG: rfr:Rfer_0524 hypothetical protein; PaaX domain-containing protein, C- domain 1368837 4358937 RPE_1212 Rhodopseudomonas palustris BisA53 PaaX domain-containing protein, C- domain YP_780144.1 1368007 R 316055 CDS YP_780145.1 115523234 4358938 1369010..1370701 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rfr:Rfer_0523 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 1370701 4358938 RPE_1213 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_780145.1 1369010 D 316055 CDS YP_780146.1 115523235 4358939 1371162..1372232 1 NC_008435.1 PFAM: NLPA lipoprotein; KEGG: rpd:RPD_2183 putative taurine transport system protein; NLPA lipoprotein 1372232 4358939 RPE_1214 Rhodopseudomonas palustris BisA53 NLPA lipoprotein YP_780146.1 1371162 D 316055 CDS YP_780147.1 115523236 4358940 1372521..1373339 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpd:RPD_2184 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1373339 4358940 RPE_1215 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport systems inner membrane component YP_780147.1 1372521 D 316055 CDS YP_780148.1 115523237 4358941 1373336..1374127 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4534 ABC transporter related; ABC transporter-like protein 1374127 4358941 RPE_1216 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780148.1 1373336 D 316055 CDS YP_780149.1 115523238 4358942 1374167..1375006 1 NC_008435.1 KEGG: rpd:RPD_2186 hypothetical protein; hypothetical protein 1375006 4358942 RPE_1217 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780149.1 1374167 D 316055 CDS YP_780150.1 115523239 4358943 1375003..1375644 1 NC_008435.1 KEGG: rpa:RPA1406 hypothetical protein; hypothetical protein 1375644 4358943 RPE_1218 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780150.1 1375003 D 316055 CDS YP_780151.1 115523240 4358944 1375647..1379195 1 NC_008435.1 TIGRFAM: urea amidolyase related protein; PFAM: biotin/lipoyl attachment domain-containing protein; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rpd:RPD_2188 allophanate hydrolase subunit 2; urea amidolyase-like protein 1379195 4358944 RPE_1219 Rhodopseudomonas palustris BisA53 urea amidolyase-like protein YP_780151.1 1375647 D 316055 CDS YP_780152.1 115523241 4358945 1379195..1380988 1 NC_008435.1 PFAM: Amidase; KEGG: ret:RHE_PE00117 putative amidase protein; amidase 1380988 4358945 RPE_1220 Rhodopseudomonas palustris BisA53 amidase YP_780152.1 1379195 D 316055 CDS YP_780153.1 115523242 4358946 complement(1380972..1381169) 1 NC_008435.1 KEGG: rpc:RPC_2372 hypothetical protein; hypothetical protein 1381169 4358946 RPE_1221 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780153.1 1380972 R 316055 CDS YP_780154.1 115523243 4358947 complement(1381289..1381573) 1 NC_008435.1 KEGG: rpa:RPA0092 hypothetical protein; hypothetical protein 1381573 4358947 RPE_1222 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780154.1 1381289 R 316055 CDS YP_780155.1 115523244 4358948 1381786..1382424 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpa:RPA0093 transcriptional regulator, TetR family; TetR family transcriptional regulator 1382424 4358948 RPE_1223 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_780155.1 1381786 D 316055 CDS YP_780156.1 115523245 4358949 1382557..1383480 1 NC_008435.1 PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_0123 PepSY-associated TM helix; PepSY-associated TM helix domain-containing protein 1383480 4358949 RPE_1224 Rhodopseudomonas palustris BisA53 PepSY-associated TM helix domain-containing protein YP_780156.1 1382557 D 316055 CDS YP_780157.1 115523246 4358816 1383510..1384664 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpa:RPA0095 putative multidrug efflux membrane fusion protein; RND family efflux transporter MFP subunit 1384664 4358816 RPE_1225 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_780157.1 1383510 D 316055 CDS YP_780158.1 115523247 4358817 1384668..1387835 1 NC_008435.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpa:RPA0096 putative multidrug-efflux transport protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 1387835 4358817 RPE_1226 Rhodopseudomonas palustris BisA53 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_780158.1 1384668 D 316055 CDS YP_780159.1 115523248 4358818 1387885..1388184 1 NC_008435.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: neu:NE0621 DUF176; antibiotic biosynthesis monooxygenase 1388184 4358818 RPE_1227 Rhodopseudomonas palustris BisA53 antibiotic biosynthesis monooxygenase YP_780159.1 1387885 D 316055 CDS YP_780160.1 115523249 4358819 1388181..1389371 1 NC_008435.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: rpb:RPB_0946 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1389371 4358819 RPE_1228 Rhodopseudomonas palustris BisA53 iron-containing alcohol dehydrogenase YP_780160.1 1388181 D 316055 CDS YP_780161.1 115523250 4358820 1390312..1391313 1 NC_008435.1 PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; KEGG: rpd:RPD_1160 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase, 20 kDa subunit 1391313 4358820 RPE_1229 Rhodopseudomonas palustris BisA53 NADH ubiquinone oxidoreductase, 20 kDa subunit YP_780161.1 1390312 D 316055 CDS YP_780162.1 115523251 4358821 1391310..1392755 1 NC_008435.1 PFAM: nickel-dependent hydrogenase, large subunit; KEGG: rpd:RPD_1161 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 1392755 4358821 RPE_1230 Rhodopseudomonas palustris BisA53 nickel-dependent hydrogenase, large subunit YP_780162.1 1391310 D 316055 CDS YP_780163.1 115523252 4358822 1392989..1394104 1 NC_008435.1 KEGG: rpd:RPD_1162 hydrogenase (NiFe) small subunit (HydA); TIGRFAM: hydrogenase (NiFe) small subunit HydA; Twin-arginine translocation pathway signal; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 1394104 4358822 RPE_1231 Rhodopseudomonas palustris BisA53 hydrogenase (NiFe) small subunit HydA YP_780163.1 1392989 D 316055 CDS YP_780164.1 115523253 4358823 1394123..1395916 1 NC_008435.1 PFAM: nickel-dependent hydrogenase, large subunit; KEGG: rpc:RPC_3771 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase, large subunit 1395916 4358823 RPE_1232 Rhodopseudomonas palustris BisA53 nickel-dependent hydrogenase, large subunit YP_780164.1 1394123 D 316055 CDS YP_780165.1 115523254 4358824 1395994..1396719 1 NC_008435.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: rpa:RPA0964 Ni/Fe-hydrogenase 1 B-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 1396719 4358824 RPE_1233 Rhodopseudomonas palustris BisA53 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_780165.1 1395994 D 316055 CDS YP_780166.1 115523255 4358825 1397044..1397643 1 NC_008435.1 TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52, hydrogen uptake protein; KEGG: rpa:RPA0965 hydrogenase maturation protein hupD; hydrogenase expression/formation protein 1397643 4358825 RPE_1234 Rhodopseudomonas palustris BisA53 hydrogenase expression/formation protein YP_780166.1 1397044 D 316055 CDS YP_780167.1 115523256 4358826 1397653..1397952 1 NC_008435.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rpd:RPD_1167 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 1397952 4358826 RPE_1235 Rhodopseudomonas palustris BisA53 hydrogenase assembly chaperone HypC/HupF YP_780167.1 1397653 D 316055 CDS YP_780168.1 115523257 4358827 1398204..1398611 1 NC_008435.1 PFAM: hydrogenase-1 expression HyaE; KEGG: rpd:RPD_1168 hydrogenase-1 expression HyaE; hydrogenase-1 expression HyaE 1398611 4358827 RPE_1236 Rhodopseudomonas palustris BisA53 hydrogenase-1 expression HyaE YP_780168.1 1398204 D 316055 CDS YP_780169.1 115523258 4358828 1398608..1399480 1 NC_008435.1 PFAM: HupH hydrogenase expression protein; KEGG: rpd:RPD_1169 HupH hydrogenase expression protein; HupH hydrogenase expression protein 1399480 4358828 RPE_1237 Rhodopseudomonas palustris BisA53 HupH hydrogenase expression protein YP_780169.1 1398608 D 316055 CDS YP_780170.1 115523259 4358829 1399477..1399689 1 NC_008435.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: rpd:RPD_1170 rubredoxin-type Fe(Cys)4 protein; rubredoxin-type Fe(Cys)4 protein 1399689 4358829 RPE_1238 Rhodopseudomonas palustris BisA53 rubredoxin-type Fe(Cys)4 protein YP_780170.1 1399477 D 316055 CDS YP_780171.1 115523260 4358830 1399679..1400215 1 NC_008435.1 KEGG: rpd:RPD_1171 putative hydrogenase expression/formation protein HupJ; putative hydrogenase expression/formation protein HupJ 1400215 4358830 RPE_1239 Rhodopseudomonas palustris BisA53 putative hydrogenase expression/formation protein HupJ YP_780171.1 1399679 D 316055 CDS YP_780172.1 115523261 4358831 1400212..1401324 1 NC_008435.1 KEGG: rpd:RPD_1172 coenzyme F420-reducing hydrogenase alpha subunit-like; coenzyme F420-reducing hydrogenase subunit alpha-like protein 1401324 4358831 RPE_1240 Rhodopseudomonas palustris BisA53 coenzyme F420-reducing hydrogenase subunit alpha-like protein YP_780172.1 1400212 D 316055 CDS YP_780173.1 115523262 4358832 1401317..1401658 1 NC_008435.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: rpc:RPC_3762 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 1401658 4358832 RPE_1241 Rhodopseudomonas palustris BisA53 hydrogenase nickel incorporation protein HypA YP_780173.1 1401317 D 316055 CDS YP_780174.1 115523263 4359976 1401658..1402632 1 NC_008435.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: rpd:RPD_1174 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 1402632 4359976 RPE_1242 Rhodopseudomonas palustris BisA53 hydrogenase nickel incorporation protein HypB YP_780174.1 1401658 D 316055 CDS YP_780175.1 115523264 4359977 1402637..1404892 1 NC_008435.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: rpd:RPD_1175 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 1404892 4359977 RPE_1243 Rhodopseudomonas palustris BisA53 (NiFe) hydrogenase maturation protein HypF YP_780175.1 1402637 D 316055 CDS YP_780176.1 115523265 4359978 1404902..1405138 1 NC_008435.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rpc:RPC_3760 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 1405138 4359978 RPE_1244 Rhodopseudomonas palustris BisA53 hydrogenase assembly chaperone HypC/HupF YP_780176.1 1404902 D 316055 CDS YP_780177.1 115523266 4359979 1405135..1406277 1 NC_008435.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: rpa:RPA0977 hydrogenase expression/formation protein hypD; hydrogenase expression/formation protein HypD 1406277 4359979 RPE_1245 Rhodopseudomonas palustris BisA53 hydrogenase expression/formation protein HypD YP_780177.1 1405135 D 316055 CDS YP_780178.1 115523267 4359980 1406274..1407320 1 NC_008435.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rpd:RPD_1178 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 1407320 4359980 RPE_1246 Rhodopseudomonas palustris BisA53 hydrogenase expression/formation protein HypE YP_780178.1 1406274 D 316055 CDS YP_780179.1 115523268 4359981 1407348..1408823 1 NC_008435.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpd:RPD_1179 sigma-54 factor, interaction region; two component sigma54 specific Fis family transcriptional regulator 1408823 4359981 RPE_1247 Rhodopseudomonas palustris BisA53 two component sigma54 specific Fis family transcriptional regulator YP_780179.1 1407348 D 316055 CDS YP_780180.1 115523269 4359982 1408932..1410323 1 NC_008435.1 KEGG: rpd:RPD_1180 ATP-binding region, ATPase-like; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 1410323 4359982 RPE_1248 Rhodopseudomonas palustris BisA53 PAS/PAC sensor signal transduction histidine kinase YP_780180.1 1408932 D 316055 CDS YP_780181.1 115523270 4359983 1410405..1410578 1 NC_008435.1 KEGG: bja:bsl6114 hypothetical protein; hypothetical protein 1410578 4359983 RPE_1249 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780181.1 1410405 D 316055 CDS YP_780182.1 115523271 4359984 1410895..1412115 1 NC_008435.1 PFAM: metallophosphoesterase; KEGG: rpc:RPC_1185 metallophosphoesterase; metallophosphoesterase 1412115 4359984 RPE_1250 Rhodopseudomonas palustris BisA53 metallophosphoesterase YP_780182.1 1410895 D 316055 CDS YP_780183.1 115523272 4359985 1412112..1415567 1 NC_008435.1 PFAM: SMC domain protein; KEGG: rpc:RPC_1186 hypothetical protein; SMC domain-containing protein 1415567 4359985 RPE_1251 Rhodopseudomonas palustris BisA53 SMC domain-containing protein YP_780183.1 1412112 D 316055 CDS YP_780184.1 115523273 4359986 complement(1415600..1415821) 1 NC_008435.1 KEGG: rpc:RPC_1277 hypothetical protein; hypothetical protein 1415821 4359986 RPE_1252 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780184.1 1415600 R 316055 CDS YP_780185.1 115523274 4359987 complement(1416049..1417686) 1 NC_008435.1 PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rpc:RPC_1191 thiamine pyrophosphate enzyme-like TPP binding region; thiamine pyrophosphate binding domain-containing protein 1417686 4359987 RPE_1253 Rhodopseudomonas palustris BisA53 thiamine pyrophosphate binding domain-containing protein YP_780185.1 1416049 R 316055 CDS YP_780186.1 115523275 4359988 1417819..1418274 1 NC_008435.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rpc:RPC_1192 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1418274 4359988 RPE_1254 Rhodopseudomonas palustris BisA53 AsnC family transcriptional regulator YP_780186.1 1417819 D 316055 CDS YP_780187.1 115523276 4359989 complement(1418527..1418913) 1 NC_008435.1 PFAM: Rhodanese domain protein; KEGG: rpc:RPC_1202 rhodanese-like; rhodanese domain-containing protein 1418913 4359989 RPE_1255 Rhodopseudomonas palustris BisA53 rhodanese domain-containing protein YP_780187.1 1418527 R 316055 CDS YP_780188.1 115523277 4359990 complement(1419101..1419358) 1 NC_008435.1 KEGG: rpc:RPC_1208 hypothetical protein; hypothetical protein 1419358 4359990 RPE_1256 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780188.1 1419101 R 316055 CDS YP_780189.1 115523278 4359991 complement(1419422..1419949) 1 NC_008435.1 KEGG: rpd:RPD_4184 hypothetical protein; hypothetical protein 1419949 4359991 RPE_1257 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780189.1 1419422 R 316055 CDS YP_780190.1 115523279 4359992 complement(1420032..1422725) 1 NC_008435.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rpb:RPB_1752 molybdopterin oxidoreductase; molybdopterin oxidoreductase 1422725 4359992 RPE_1258 Rhodopseudomonas palustris BisA53 molybdopterin oxidoreductase YP_780190.1 1420032 R 316055 CDS YP_780191.1 115523280 4359993 complement(1422725..1424341) 1 NC_008435.1 Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway; sulfite reductase 1424341 4359993 RPE_1259 Rhodopseudomonas palustris BisA53 sulfite reductase YP_780191.1 1422725 R 316055 CDS YP_780192.1 115523281 4358678 complement(1424338..1426098) 1 NC_008435.1 ferredoxin-dependent assimilatory nitrite reductase; ferredoxin-nitrite reductase 1426098 nirA 4358678 nirA Rhodopseudomonas palustris BisA53 ferredoxin-nitrite reductase YP_780192.1 1424338 R 316055 CDS YP_780193.1 115523282 4358679 complement(1426122..1427351) 1 NC_008435.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: rpb:RPB_1755 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1427351 4358679 RPE_1261 Rhodopseudomonas palustris BisA53 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_780193.1 1426122 R 316055 CDS YP_780194.1 115523283 4358680 complement(1427348..1427770) 1 NC_008435.1 PFAM: globin; KEGG: rpb:RPB_1756 globin; globin 1427770 4358680 RPE_1262 Rhodopseudomonas palustris BisA53 globin YP_780194.1 1427348 R 316055 CDS YP_780195.1 115523284 4358681 complement(1427966..1428760) 1 NC_008435.1 KEGG: rpb:RPB_1758 nitrate transport ATP-binding subunits C and D; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D 1428760 4358681 RPE_1263 Rhodopseudomonas palustris BisA53 nitrate ABC transporter ATPases C and D YP_780195.1 1427966 R 316055 CDS YP_780196.1 115523285 4358682 complement(1428771..1429670) 1 NC_008435.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1759 nitrate transport permease; nitrate ABC transporter inner membrane subunit 1429670 4358682 RPE_1264 Rhodopseudomonas palustris BisA53 nitrate ABC transporter inner membrane subunit YP_780196.1 1428771 R 316055 CDS YP_780197.1 115523286 4358683 complement(1429732..1431039) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_1760 twin-arginine translocation pathway signal; ABC-type nitrate transport system periplasmic component 1431039 4358683 RPE_1265 Rhodopseudomonas palustris BisA53 ABC-type nitrate transport system periplasmic component YP_780197.1 1429732 R 316055 CDS YP_780198.1 115523287 4358684 complement(1431385..1432551) 1 NC_008435.1 KEGG: rpc:RPC_1210 putative nitrate transporter component, NrtA; putative nitrate transporter component, NrtA 1432551 4358684 RPE_1266 Rhodopseudomonas palustris BisA53 putative nitrate transporter component, NrtA YP_780198.1 1431385 R 316055 CDS YP_780199.1 115523288 4358685 complement(1432548..1433132) 1 NC_008435.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: rpc:RPC_1211 response regulator receiver (CheY-like) and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 1433132 4358685 RPE_1267 Rhodopseudomonas palustris BisA53 response regulator receiver/ANTAR domain-containing protein YP_780199.1 1432548 R 316055 CDS YP_780200.1 115523289 4358686 1433347..1433733 1 NC_008435.1 PFAM: BA14K family protein; KEGG: rpb:RPB_1022 BA14K-like; BA14K family protein 1433733 4358686 RPE_1268 Rhodopseudomonas palustris BisA53 BA14K family protein YP_780200.1 1433347 D 316055 CDS YP_780201.1 115523290 4358687 1433866..1434114 1 NC_008435.1 KEGG: rpc:RPC_1220 hypothetical protein; hypothetical protein 1434114 4358687 RPE_1269 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780201.1 1433866 D 316055 CDS YP_780202.1 115523291 4358688 1434257..1434433 1 NC_008435.1 KEGG: rpb:RPB_4256 hypothetical protein; hypothetical protein 1434433 4358688 RPE_1270 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780202.1 1434257 D 316055 CDS YP_780203.1 115523292 4358689 complement(1434609..1434929) 1 NC_008435.1 KEGG: rpc:RPC_1225 hypothetical protein; hypothetical protein 1434929 4358689 RPE_1271 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780203.1 1434609 R 316055 CDS YP_780204.1 115523293 4358690 complement(1434993..1435406) 1 NC_008435.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: xcv:XCV0196 putative glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 1435406 4358690 RPE_1272 Rhodopseudomonas palustris BisA53 glyoxalase/bleomycin resistance protein/dioxygenase YP_780204.1 1434993 R 316055 CDS YP_780205.1 115523294 4358691 complement(1435460..1437274) 1 NC_008435.1 KEGG: rpc:RPC_1226 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; malto-oligosyltrehalose trehalohydrolase 1437274 4358691 RPE_1273 Rhodopseudomonas palustris BisA53 malto-oligosyltrehalose trehalohydrolase YP_780205.1 1435460 R 316055 CDS YP_780206.1 115523295 4358692 1437430..1439592 1 NC_008435.1 KEGG: rpc:RPC_1227 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX 1439592 4358692 RPE_1274 Rhodopseudomonas palustris BisA53 glycogen debranching protein GlgX YP_780206.1 1437430 D 316055 CDS YP_780207.1 115523296 4358693 1439711..1440085 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_1228 response regulator receiver domain protein (CheY-like); response regulator receiver protein 1440085 4358693 RPE_1275 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_780207.1 1439711 D 316055 CDS YP_780208.1 115523297 4358694 1440280..1441080 1 NC_008435.1 KEGG: rpc:RPC_1229 hypothetical protein; hypothetical protein 1441080 4358694 RPE_1276 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780208.1 1440280 D 316055 CDS YP_780209.1 115523298 4358660 1441139..1441363 1 NC_008435.1 KEGG: rpc:RPC_1230 hypothetical protein; hypothetical protein 1441363 4358660 RPE_1277 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780209.1 1441139 D 316055 CDS YP_780210.1 115523299 4358661 complement(1441402..1443615) 1 NC_008435.1 PFAM: glycosyl transferase, group 1; glycosyl transferase, family 20; KEGG: rpb:RPB_1021 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Alpha,alpha-trehalose-phosphate synthase 1443615 4358661 RPE_1278 Rhodopseudomonas palustris BisA53 Alpha,alpha-trehalose-phosphate synthase YP_780210.1 1441402 R 316055 CDS YP_780211.1 115523300 4358662 complement(1443972..1444229) 1 NC_008435.1 hypothetical protein 1444229 4358662 RPE_1279 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780211.1 1443972 R 316055 CDS YP_780212.1 115523301 4358663 1444563..1446014 1 NC_008435.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: csa:Csal_1795 anion transporter; anion transporter 1446014 4358663 RPE_1280 Rhodopseudomonas palustris BisA53 anion transporter YP_780212.1 1444563 D 316055 CDS YP_780213.1 115523302 4358664 1446202..1447851 1 NC_008435.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 1447851 4358664 RPE_1281 Rhodopseudomonas palustris BisA53 phosphoglucomutase YP_780213.1 1446202 D 316055 CDS YP_780214.1 115523303 4358665 1447996..1448709 1 NC_008435.1 PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; KEGG: rpc:RPC_2210 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1448709 4358665 RPE_1282 Rhodopseudomonas palustris BisA53 LuxR family transcriptional regulator YP_780214.1 1447996 D 316055 CDS YP_780215.1 115523304 4358666 1448841..1449761 1 NC_008435.1 KEGG: rpc:RPC_2211 hypothetical protein; hypothetical protein 1449761 4358666 RPE_1283 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780215.1 1448841 D 316055 CDS YP_780216.1 115523305 4358667 1450240..1450947 1 NC_008435.1 KEGG: rpc:RPC_2214 hypothetical protein; hypothetical protein 1450947 4358667 RPE_1284 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780216.1 1450240 D 316055 CDS YP_780217.1 115523306 4358668 1451028..1451900 1 NC_008435.1 KEGG: rpc:RPC_2213 hypothetical protein; hypothetical protein 1451900 4358668 RPE_1285 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780217.1 1451028 D 316055 CDS YP_780218.1 115523307 4358669 1451997..1452347 1 NC_008435.1 TIGRFAM: putative addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: rpc:RPC_2215 putative transcriptional regulators, CopG/Arc/MetJ DNA-binding domain; CopG/Arc/MetJ family transcriptional regulator 1452347 4358669 RPE_1286 Rhodopseudomonas palustris BisA53 CopG/Arc/MetJ family transcriptional regulator YP_780218.1 1451997 D 316055 CDS YP_780219.1 115523308 4358670 1452319..1453059 1 NC_008435.1 PFAM: NnrUfamily protein; KEGG: rpa:RPA1485 putative NnrU protein; NnrU family protein 1453059 4358670 RPE_1287 Rhodopseudomonas palustris BisA53 NnrU family protein YP_780219.1 1452319 D 316055 CDS YP_780220.1 115523309 4358671 1453178..1454398 1 NC_008435.1 PFAM: NnrS family protein; KEGG: rpc:RPC_1235 NnrS; heme-Cu protein NnrS 1454398 4358671 RPE_1288 Rhodopseudomonas palustris BisA53 heme-Cu protein NnrS YP_780220.1 1453178 D 316055 CDS YP_780221.1 115523310 4358672 1454420..1454686 1 NC_008435.1 KEGG: rpc:RPC_1236 hypothetical protein; hypothetical protein 1454686 4358672 RPE_1289 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780221.1 1454420 D 316055 CDS YP_780222.1 115523311 4358673 complement(1454673..1455311) 1 NC_008435.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rpd:RPD_3789 response regulator receiver; two component LuxR family transcriptional regulator 1455311 4358673 RPE_1290 Rhodopseudomonas palustris BisA53 two component LuxR family transcriptional regulator YP_780222.1 1454673 R 316055 CDS YP_780223.1 115523312 4358674 1455637..1455879 1 NC_008435.1 hypothetical protein 1455879 4358674 RPE_1291 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780223.1 1455637 D 316055 CDS YP_780224.1 115523313 4358675 1456156..1456299 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpd:RPD_2610 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 1456299 4358675 RPE_1292 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_780224.1 1456156 D 316055 CDS YP_780225.1 115523314 4358676 1456314..1456493 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpb:RPB_4032 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 1456493 4358676 RPE_1293 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_780225.1 1456314 D 316055 CDS YP_780226.1 115523315 4358677 1456688..1458136 1 NC_008435.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rpc:RPC_1240 PucC protein; PUCC protein 1458136 4358677 RPE_1294 Rhodopseudomonas palustris BisA53 PUCC protein YP_780226.1 1456688 D 316055 CDS YP_780227.1 115523316 4359820 1458133..1458780 1 NC_008435.1 KEGG: rpc:RPC_1241 hypothetical protein; hypothetical protein 1458780 4359820 RPE_1295 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780227.1 1458133 D 316055 CDS YP_780228.1 115523317 4359821 1458791..1459036 1 NC_008435.1 KEGG: rpc:RPC_1242 hypothetical protein; hypothetical protein 1459036 4359821 RPE_1296 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780228.1 1458791 D 316055 CDS YP_780229.1 115523318 4359822 1459168..1460670 1 NC_008435.1 PFAM: FAD dependent oxidoreductase; KEGG: rpd:RPD_3782 putative monooxygenase; FAD dependent oxidoreductase 1460670 4359822 RPE_1297 Rhodopseudomonas palustris BisA53 FAD dependent oxidoreductase YP_780229.1 1459168 D 316055 CDS YP_780230.1 115523319 4359823 1460788..1461237 1 NC_008435.1 KEGG: rpc:RPC_1243 hypothetical protein; hypothetical protein 1461237 4359823 RPE_1298 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780230.1 1460788 D 316055 CDS YP_780231.1 115523320 4359824 complement(1461309..1461767) 1 NC_008435.1 KEGG: rpc:RPC_1244 hypothetical protein; hypothetical protein 1461767 4359824 RPE_1299 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780231.1 1461309 R 316055 CDS YP_780232.1 115523321 4359825 complement(1461930..1463159) 1 NC_008435.1 PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: rpd:RPD_3777 coenzyme F420 hydrogenase/dehydrogenase beta subunit-like; coenzyme F420 hydrogenase/dehydrogenase subunit beta 1463159 4359825 RPE_1300 Rhodopseudomonas palustris BisA53 coenzyme F420 hydrogenase/dehydrogenase subunit beta YP_780232.1 1461930 R 316055 CDS YP_780233.1 115523322 4359826 complement(1463153..1463650) 1 NC_008435.1 PFAM: protein of unknown function DUF427; KEGG: rpb:RPB_4022 protein of unknown function DUF427; hypothetical protein 1463650 4359826 RPE_1301 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780233.1 1463153 R 316055 CDS YP_780234.1 115523323 4359827 complement(1463702..1464208) 1 NC_008435.1 KEGG: rpc:RPC_1246 hypothetical protein; hypothetical protein 1464208 4359827 RPE_1302 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780234.1 1463702 R 316055 CDS YP_780235.1 115523324 4359828 complement(1464208..1465803) 1 NC_008435.1 KEGG: rpd:RPD_3774 hypothetical protein; hypothetical protein 1465803 4359828 RPE_1303 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780235.1 1464208 R 316055 CDS YP_780236.1 115523325 4359829 complement(1465834..1467153) 1 NC_008435.1 KEGG: rpb:RPB_4019 hypothetical protein; hypothetical protein 1467153 4359829 RPE_1304 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780236.1 1465834 R 316055 CDS YP_780237.1 115523326 4359830 1467439..1468419 1 NC_008435.1 KEGG: rpc:RPC_1249 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 1468419 4359830 RPE_1305 Rhodopseudomonas palustris BisA53 porphobilinogen deaminase YP_780237.1 1467439 D 316055 CDS YP_780238.1 115523327 4359831 1468463..1469485 1 NC_008435.1 KEGG: rpc:RPC_1250 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase, ChlI subunit; SMART: AAA ATPase; magnesium chelatase ATPase subunit I 1469485 4359831 RPE_1306 Rhodopseudomonas palustris BisA53 magnesium chelatase ATPase subunit I YP_780238.1 1468463 D 316055 CDS YP_780239.1 115523328 4359832 1469482..1471257 1 NC_008435.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit D 1471257 bchD 4359832 bchD Rhodopseudomonas palustris BisA53 magnesium chelatase subunit D YP_780239.1 1469482 D 316055 CDS YP_780240.1 115523329 4359833 complement(1471234..1472478) 1 NC_008435.1 KEGG: rpc:RPC_1252 transcriptional regulator, AraC family; TIGRFAM: PAS sensor protein; PFAM: helix-turn-helix- domain containing protein, AraC type; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AraC family transcriptional regulator 1472478 4359833 RPE_1308 Rhodopseudomonas palustris BisA53 AraC family transcriptional regulator YP_780240.1 1471234 R 316055 CDS YP_780241.1 115523330 4359834 complement(1472634..1473869) 1 NC_008435.1 KEGG: rpc:RPC_1252 transcriptional regulator, AraC family; TIGRFAM: PAS sensor protein; PFAM: helix-turn-helix- domain containing protein, AraC type; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AraC family transcriptional regulator 1473869 4359834 RPE_1309 Rhodopseudomonas palustris BisA53 AraC family transcriptional regulator YP_780241.1 1472634 R 316055 CDS YP_780242.1 115523331 4359835 1474178..1475881 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_1253 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1475881 4359835 RPE_1310 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780242.1 1474178 D 316055 CDS YP_780243.1 115523332 4359836 1476452..1478149 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_3380 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1478149 4359836 RPE_1311 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780243.1 1476452 D 316055 CDS YP_780244.1 115523333 4359958 complement(1478232..1479278) 1 NC_008435.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1479278 hemE 4359958 hemE Rhodopseudomonas palustris BisA53 uroporphyrinogen decarboxylase YP_780244.1 1478232 R 316055 CDS YP_780245.1 115523334 4359959 1479390..1480391 1 NC_008435.1 KEGG: rpc:RPC_1259 hypothetical protein; hypothetical protein 1480391 4359959 RPE_1313 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780245.1 1479390 D 316055 CDS YP_780246.1 115523335 4359960 1480404..1481294 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_1260 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1481294 4359960 RPE_1314 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_780246.1 1480404 D 316055 CDS YP_780247.1 115523336 4359961 1481374..1482927 1 NC_008435.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_1261 amine oxidase; amine oxidase 1482927 4359961 RPE_1315 Rhodopseudomonas palustris BisA53 amine oxidase YP_780247.1 1481374 D 316055 CDS YP_780248.1 115523337 4359962 1482924..1483976 1 NC_008435.1 PFAM: Squalene/phytoene synthase; KEGG: rpc:RPC_1262 squalene/phytoene synthase; squalene/phytoene synthase 1483976 4359962 RPE_1316 Rhodopseudomonas palustris BisA53 squalene/phytoene synthase YP_780248.1 1482924 D 316055 CDS YP_780249.1 115523338 4359963 1484109..1485011 1 NC_008435.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 1485011 4359963 RPE_1317 Rhodopseudomonas palustris BisA53 coproporphyrinogen III oxidase YP_780249.1 1484109 D 316055 CDS YP_780250.1 115523339 4359964 1485036..1485176 1 NC_008435.1 KEGG: rpb:RPB_4008 hypothetical protein; hypothetical protein 1485176 4359964 RPE_1318 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780250.1 1485036 D 316055 CDS YP_780251.1 115523340 4359965 1485222..1485371 1 NC_008435.1 KEGG: rpc:RPC_1265 hypothetical protein; hypothetical protein 1485371 4359965 RPE_1319 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780251.1 1485222 D 316055 CDS YP_780252.1 115523341 4359966 complement(1485466..1486497) 1 NC_008435.1 PFAM: hydroxyneurosporene synthase; KEGG: rpc:RPC_1288 hydroxyneurosporene synthase; hydroxyneurosporene synthase 1486497 4359966 RPE_1320 Rhodopseudomonas palustris BisA53 hydroxyneurosporene synthase YP_780252.1 1485466 R 316055 CDS YP_780253.1 115523342 4359967 complement(1486652..1487074) 1 NC_008435.1 KEGG: rpb:RPB_0709 integral membrane protein-like; integral membrane protein-like protein 1487074 4359967 RPE_1321 Rhodopseudomonas palustris BisA53 integral membrane protein-like protein YP_780253.1 1486652 R 316055 CDS YP_780254.1 115523343 4359968 1487543..1488193 1 NC_008435.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: jan:Jann_0393 NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase 1488193 4359968 RPE_1322 Rhodopseudomonas palustris BisA53 3-beta hydroxysteroid dehydrogenase/isomerase YP_780254.1 1487543 D 316055 CDS YP_780255.1 115523344 4359969 complement(1488305..1489849) 1 NC_008435.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpc:RPC_1289 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1489849 4359969 RPE_1323 Rhodopseudomonas palustris BisA53 FAD dependent oxidoreductase YP_780255.1 1488305 R 316055 CDS YP_780256.1 115523345 4359970 1489929..1490795 1 NC_008435.1 PFAM: Polyprenyl synthetase; KEGG: rpc:RPC_1290 polyprenyl synthetase; polyprenyl synthetase 1490795 4359970 RPE_1324 Rhodopseudomonas palustris BisA53 polyprenyl synthetase YP_780256.1 1489929 D 316055 CDS YP_780257.1 115523346 4359971 1490833..1491978 1 NC_008435.1 PFAM: O-methyltransferase, family 2; Methyltransferase type 12; KEGG: rpc:RPC_1291 O-methyltransferase, family 2; O-methyltransferase family protein 1491978 4359971 RPE_1325 Rhodopseudomonas palustris BisA53 O-methyltransferase family protein YP_780257.1 1490833 D 316055 CDS YP_780258.1 115523347 4359972 1492061..1492999 1 NC_008435.1 TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_1292 chlorophyll synthesis pathway, BchC; chlorophyll synthesis pathway protein BchC 1492999 4359972 RPE_1326 Rhodopseudomonas palustris BisA53 chlorophyll synthesis pathway protein BchC YP_780258.1 1492061 D 316055 CDS YP_780259.1 115523348 4359973 1492999..1493994 1 NC_008435.1 KEGG: rpc:RPC_1293 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X 1493994 4359973 RPE_1327 Rhodopseudomonas palustris BisA53 chlorophyllide reductase iron protein subunit X YP_780259.1 1492999 D 316055 CDS YP_780260.1 115523349 4359974 1494020..1495609 1 NC_008435.1 TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpc:RPC_1294 chlorophyllide reductase subunit Y; chlorophyllide reductase subunit Y 1495609 4359974 RPE_1328 Rhodopseudomonas palustris BisA53 chlorophyllide reductase subunit Y YP_780260.1 1494020 D 316055 CDS YP_780261.1 115523350 4359975 1495609..1497057 1 NC_008435.1 TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase, component 1; protein of unknown function DUF1197; KEGG: rpc:RPC_1295 chlorophyllide reductase subunit Z; chlorophyllide reductase subunit Z 1497057 4359975 RPE_1329 Rhodopseudomonas palustris BisA53 chlorophyllide reductase subunit Z YP_780261.1 1495609 D 316055 CDS YP_780262.1 115523351 4358833 1497135..1497362 1 NC_008435.1 KEGG: rpc:RPC_1296 hypothetical protein; hypothetical protein 1497362 4358833 RPE_1330 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780262.1 1497135 D 316055 CDS YP_780263.1 115523352 4358834 1497505..1497717 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_1297 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 1497717 4358834 RPE_1331 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_780263.1 1497505 D 316055 CDS YP_780264.1 115523353 4358835 1497733..1497903 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_1298 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 1497903 4358835 RPE_1332 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_780264.1 1497733 D 316055 CDS YP_780265.1 115523354 4358836 1498035..1498868 1 NC_008435.1 TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: rpc:RPC_1299 photosynthetic reaction center L subunit; photosynthetic reaction center subunit L 1498868 4358836 RPE_1333 Rhodopseudomonas palustris BisA53 photosynthetic reaction center subunit L YP_780265.1 1498035 D 316055 CDS YP_780266.1 115523355 4358837 1498899..1499819 1 NC_008435.1 TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: rpc:RPC_1300 photosynthetic reaction center M subunit; photosynthetic reaction center subunit M 1499819 4358837 RPE_1334 Rhodopseudomonas palustris BisA53 photosynthetic reaction center subunit M YP_780266.1 1498899 D 316055 CDS YP_780267.1 115523356 4358838 1500006..1501439 1 NC_008435.1 KEGG: rpc:RPC_1301 putative PAS/PAC sensor protein; TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix, Fis-type; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 1501439 4358838 RPE_1335 Rhodopseudomonas palustris BisA53 putative PAS/PAC sensor protein YP_780267.1 1500006 D 316055 CDS YP_780268.1 115523357 4358839 1501432..1502325 1 NC_008435.1 TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rpb:RPB_3992 bacteriochlorophyll/chlorophyll synthetase; bacteriochlorophyll/chlorophyll a synthase 1502325 4358839 RPE_1336 Rhodopseudomonas palustris BisA53 bacteriochlorophyll/chlorophyll a synthase YP_780268.1 1501432 D 316055 CDS YP_780269.1 115523358 4358840 1502325..1503674 1 NC_008435.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rpc:RPC_1303 PucC protein; PUCC protein 1503674 4358840 RPE_1337 Rhodopseudomonas palustris BisA53 PUCC protein YP_780269.1 1502325 D 316055 CDS YP_780270.1 115523359 4358841 1503671..1504876 1 NC_008435.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: rpb:RPB_3990 geranylgeranyl reductase; geranylgeranyl reductase 1504876 4358841 RPE_1338 Rhodopseudomonas palustris BisA53 geranylgeranyl reductase YP_780270.1 1503671 D 316055 CDS YP_780271.1 115523360 4358842 1504876..1505364 1 NC_008435.1 PFAM: TspO/MBR family protein; KEGG: rpc:RPC_1305 TspO and MBR like proteins; TspO and MBR like proteins 1505364 4358842 RPE_1339 Rhodopseudomonas palustris BisA53 TspO and MBR like proteins YP_780271.1 1504876 D 316055 CDS YP_780272.1 115523361 4358843 1505410..1505676 1 NC_008435.1 KEGG: rpc:RPC_1306 hypothetical protein; hypothetical protein 1505676 4358843 RPE_1340 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780272.1 1505410 D 316055 CDS YP_780273.1 115523362 4358844 complement(1505712..1506149) 1 NC_008435.1 PFAM: cytochrome c, class I; KEGG: rpc:RPC_1307 cytochrome c, class I; cytochrome c, class I 1506149 4358844 RPE_1341 Rhodopseudomonas palustris BisA53 cytochrome c, class I YP_780273.1 1505712 R 316055 CDS YP_780274.1 115523363 4358845 1506352..1507812 1 NC_008435.1 KEGG: rpc:RPC_1308 putative PAS/PAC sensor protein; TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 1507812 4358845 RPE_1342 Rhodopseudomonas palustris BisA53 putative PAS/PAC sensor protein YP_780274.1 1506352 D 316055 CDS YP_780275.1 115523364 4358846 1507814..1509994 1 NC_008435.1 TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; Phytochrome, central region domain protein; PAS fold-2 domain protein; PAS fold domain protein; KEGG: rpc:RPC_1309 putative PAS/PAC sensor protein; putative PAS/PAC sensor protein 1509994 4358846 RPE_1343 Rhodopseudomonas palustris BisA53 putative PAS/PAC sensor protein YP_780275.1 1507814 D 316055 CDS YP_780276.1 115523365 4358847 complement(1510013..1510702) 1 NC_008435.1 PFAM: Haem oxygenase; KEGG: rpc:RPC_1310 heme oxygenase (decyclizing); heme oxygenase 1510702 4358847 RPE_1344 Rhodopseudomonas palustris BisA53 heme oxygenase YP_780276.1 1510013 R 316055 CDS YP_780277.1 115523366 4358848 complement(1510751..1511635) 1 NC_008435.1 KEGG: rpc:RPC_1311 cobalamin B12-binding; cobalamin B12-binding protein 1511635 4358848 RPE_1345 Rhodopseudomonas palustris BisA53 cobalamin B12-binding protein YP_780277.1 1510751 R 316055 CDS YP_780278.1 115523367 4358849 1511944..1512471 1 NC_008435.1 PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rpc:RPC_1312 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD 1512471 4358849 RPE_1346 Rhodopseudomonas palustris BisA53 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD YP_780278.1 1511944 D 316055 CDS YP_780279.1 115523368 4359001 1512468..1513751 1 NC_008435.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N 1513751 4359001 RPE_1347 Rhodopseudomonas palustris BisA53 light-independent protochlorophyllide reductase subunit N YP_780279.1 1512468 D 316055 CDS YP_780280.1 115523369 4359002 1513753..1515348 1 NC_008435.1 light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B 1515348 4359002 RPE_1348 Rhodopseudomonas palustris BisA53 light-independent protochlorophyllide reductase subunit B YP_780280.1 1513753 D 316055 CDS YP_780281.1 115523370 4359003 1515323..1519069 1 NC_008435.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH; magnesium chelatase subunit H 1519069 bchH 4359003 bchH Rhodopseudomonas palustris BisA53 magnesium chelatase subunit H YP_780281.1 1515323 D 316055 CDS YP_780282.1 115523371 4359004 1519066..1519998 1 NC_008435.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein 1519998 chlL 4359004 chlL Rhodopseudomonas palustris BisA53 protochlorophyllide reductase iron-sulfur ATP-binding protein YP_780282.1 1519066 D 316055 CDS YP_780283.1 115523372 4359005 1519998..1520699 1 NC_008435.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase 1520699 4359005 RPE_1351 Rhodopseudomonas palustris BisA53 Mg-protoporphyrin IX methyl transferase YP_780283.1 1519998 D 316055 CDS YP_780284.1 115523373 4359006 1520696..1522129 1 NC_008435.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rpc:RPC_1318 PucC protein; PUCC protein 1522129 4359006 RPE_1352 Rhodopseudomonas palustris BisA53 PUCC protein YP_780284.1 1520696 D 316055 CDS YP_780285.1 115523374 4359007 1522151..1522918 1 NC_008435.1 PFAM: photosynthetic reaction centre, H-chain; PRC-barrel domain protein; KEGG: rpc:RPC_1319 photosynthetic reaction centre, H-chain; photosynthetic reaction center subunit H 1522918 4359007 RPE_1353 Rhodopseudomonas palustris BisA53 photosynthetic reaction center subunit H YP_780285.1 1522151 D 316055 CDS YP_780286.1 115523375 4359008 1522915..1523577 1 NC_008435.1 KEGG: rpc:RPC_1320 putative photosynthetic complex assembly protein; putative photosynthetic complex assembly protein 1523577 4359008 RPE_1354 Rhodopseudomonas palustris BisA53 putative photosynthetic complex assembly protein YP_780286.1 1522915 D 316055 CDS YP_780287.1 115523376 4359009 1523591..1524058 1 NC_008435.1 KEGG: rpc:RPC_1321 putative photosynthetic complex assembly protein; putative photosynthetic complex assembly protein 1524058 4359009 RPE_1355 Rhodopseudomonas palustris BisA53 putative photosynthetic complex assembly protein YP_780287.1 1523591 D 316055 CDS YP_780288.1 115523377 4359010 1524055..1524351 1 NC_008435.1 KEGG: rpc:RPC_1322 hypothetical protein; hypothetical protein 1524351 4359010 RPE_1356 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780288.1 1524055 D 316055 CDS YP_780289.1 115523378 4359011 1524360..1525454 1 NC_008435.1 oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase 1525454 4359011 RPE_1357 Rhodopseudomonas palustris BisA53 magnesium-protoporphyrin IX monomethyl ester cyclase YP_780289.1 1524360 D 316055 CDS YP_780290.1 115523379 4359012 1525468..1526541 1 NC_008435.1 KEGG: rpc:RPC_1324 hypothetical protein; hypothetical protein 1526541 4359012 RPE_1358 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780290.1 1525468 D 316055 CDS YP_780291.1 115523380 4359013 1526538..1527749 1 NC_008435.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 1527749 4359013 RPE_1359 Rhodopseudomonas palustris BisA53 5-aminolevulinate synthase YP_780291.1 1526538 D 316055 CDS YP_780292.1 115523381 4359014 complement(1527802..1528770) 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_1326 transcriptional regulator, LysR family; LysR family transcriptional regulator 1528770 4359014 RPE_1360 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_780292.1 1527802 R 316055 CDS YP_780293.1 115523382 4359015 1528934..1530391 1 NC_008435.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 1530391 rbcL 4359015 rbcL Rhodopseudomonas palustris BisA53 ribulose bisophosphate carboxylase YP_780293.1 1528934 D 316055 CDS YP_780294.1 115523383 4359016 1530403..1530828 1 NC_008435.1 PFAM: ribulose bisphosphate carboxylase, small chain; KEGG: rpc:RPC_1328 ribulose-bisphosphate carboxylase; ribulose-bisphosphate carboxylase form I small subunit 1530828 4359016 RPE_1362 Rhodopseudomonas palustris BisA53 ribulose-bisphosphate carboxylase form I small subunit YP_780294.1 1530403 D 316055 CDS YP_780295.1 115523384 4359017 1530825..1531745 1 NC_008435.1 PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_1329 AAA ATPase, central region; ATPase central domain-containing protein 1531745 4359017 RPE_1363 Rhodopseudomonas palustris BisA53 ATPase central domain-containing protein YP_780295.1 1530825 D 316055 CDS YP_780296.1 115523385 4359018 complement(1532508..1533290) 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_1330 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1533290 4359018 RPE_1364 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_780296.1 1532508 R 316055 CDS YP_780297.1 115523386 4358557 complement(1533294..1534589) 1 NC_008435.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 1534589 4358557 RPE_1365 Rhodopseudomonas palustris BisA53 O-acetylhomoserine aminocarboxypropyltransferase YP_780297.1 1533294 R 316055 CDS YP_780298.1 115523387 4358558 complement(1534638..1536905) 1 NC_008435.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: rpc:RPC_1332 oligopeptidase B; oligopeptidase B 1536905 4358558 RPE_1366 Rhodopseudomonas palustris BisA53 oligopeptidase B YP_780298.1 1534638 R 316055 CDS YP_780299.1 115523388 4358559 complement(1537233..1537454) 1 NC_008435.1 PFAM: SlyX family protein; KEGG: rpc:RPC_1351 SlyX; SlyX family protein 1537454 4358559 RPE_1367 Rhodopseudomonas palustris BisA53 SlyX family protein YP_780299.1 1537233 R 316055 CDS YP_780300.1 115523389 4358560 1537619..1539205 1 NC_008435.1 KEGG: rpc:RPC_1352 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1539205 4358560 RPE_1368 Rhodopseudomonas palustris BisA53 gamma-glutamyltransferase YP_780300.1 1537619 D 316055 CDS YP_780301.1 115523390 4358561 complement(1539393..1539611) 1 NC_008435.1 PFAM: CsbD family protein; KEGG: rpc:RPC_1353 CsbD-like; CsbD-like protein 1539611 4358561 RPE_1369 Rhodopseudomonas palustris BisA53 CsbD-like protein YP_780301.1 1539393 R 316055 CDS YP_780302.1 115523391 4358562 1540128..1542764 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; KEGG: rpc:RPC_1355 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 1542764 4358562 RPE_1370 Rhodopseudomonas palustris BisA53 multi-sensor hybrid histidine kinase YP_780302.1 1540128 D 316055 CDS YP_780303.1 115523392 4358563 1542866..1543297 1 NC_008435.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr2408 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 1543297 4358563 RPE_1371 Rhodopseudomonas palustris BisA53 glyoxalase/bleomycin resistance protein/dioxygenase YP_780303.1 1542866 D 316055 CDS YP_780304.1 115523393 4358564 1543317..1543799 1 NC_008435.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: bja:blr2409 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase 1543799 4358564 RPE_1372 Rhodopseudomonas palustris BisA53 3-demethylubiquinone-9 3-methyltransferase YP_780304.1 1543317 D 316055 CDS YP_780305.1 115523394 4358565 1543900..1545003 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_1356 secretion protein HlyD; RND family efflux transporter MFP subunit 1545003 4358565 RPE_1373 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_780305.1 1543900 D 316055 CDS YP_780306.1 115523395 4358566 1545019..1548156 1 NC_008435.1 PFAM: acriflavin resistance protein; KEGG: rpd:RPD_4073 acriflavin resistance protein; acriflavin resistance protein 1548156 4358566 RPE_1374 Rhodopseudomonas palustris BisA53 acriflavin resistance protein YP_780306.1 1545019 D 316055 CDS YP_780307.1 115523396 4358567 1548174..1548785 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_1358 transcriptional regulator, TetR family; TetR family transcriptional regulator 1548785 4358567 RPE_1375 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_780307.1 1548174 D 316055 CDS YP_780308.1 115523397 4358568 1548931..1549560 1 NC_008435.1 KEGG: rpc:RPC_1359 hypothetical protein; hypothetical protein 1549560 4358568 RPE_1376 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780308.1 1548931 D 316055 CDS YP_780309.1 115523398 4358569 1549683..1550507 1 NC_008435.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: rpc:RPC_1360 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 1550507 4358569 RPE_1377 Rhodopseudomonas palustris BisA53 DeoR family transcriptional regulator YP_780309.1 1549683 D 316055 CDS YP_780310.1 115523399 4358570 1550650..1552194 1 NC_008435.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 1552194 glpD 4358570 glpD Rhodopseudomonas palustris BisA53 glycerol-3-phosphate dehydrogenase YP_780310.1 1550650 D 316055 CDS YP_780311.1 115523400 4358571 1552191..1553270 1 NC_008435.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_1362 ABC transporter related; ABC transporter-like protein 1553270 4358571 RPE_1379 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780311.1 1552191 D 316055 CDS YP_780312.1 115523401 4358572 1553283..1554386 1 NC_008435.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpd:RPD_4067 ABC transporter related; ABC transporter-like protein 1554386 4358572 RPE_1380 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780312.1 1553283 D 316055 CDS YP_780313.1 115523402 4358573 1554386..1555288 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4214 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 1555288 4358573 RPE_1381 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport systems inner membrane component YP_780313.1 1554386 D 316055 CDS YP_780314.1 115523403 4358469 1555288..1556094 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_1365 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1556094 4358469 RPE_1382 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport system inner membrane protein YP_780314.1 1555288 D 316055 CDS YP_780315.1 115523404 4358470 1556874..1557203 1 NC_008435.1 KEGG: rpc:RPC_1366 hypothetical protein; hypothetical protein 1557203 4358470 RPE_1383 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780315.1 1556874 D 316055 CDS YP_780316.1 115523405 4358471 1557268..1559064 1 NC_008435.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rpd:RPD_4063 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1559064 4358471 RPE_1384 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_780316.1 1557268 D 316055 CDS YP_780317.1 115523406 4358472 complement(1559505..1560605) 1 NC_008435.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rpc:RPC_1368 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 1560605 4358472 RPE_1385 Rhodopseudomonas palustris BisA53 NADH:flavin oxidoreductase YP_780317.1 1559505 R 316055 CDS YP_780318.1 115523407 4358473 complement(1560786..1561847) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpc:RPC_1370 inner-membrane translocator; inner-membrane translocator 1561847 4358473 RPE_1386 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_780318.1 1560786 R 316055 CDS YP_780319.1 115523408 4358474 complement(1561858..1562895) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpc:RPC_1371 inner-membrane translocator; inner-membrane translocator 1562895 4358474 RPE_1387 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_780319.1 1561858 R 316055 CDS YP_780320.1 115523409 4358475 complement(1562999..1563721) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1372 ABC transporter related; ABC transporter-like protein 1563721 4358475 RPE_1388 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780320.1 1562999 R 316055 CDS YP_780321.1 115523410 4358476 complement(1563718..1564482) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1373 ABC transporter related; ABC transporter-like protein 1564482 4358476 RPE_1389 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780321.1 1563718 R 316055 CDS YP_780322.1 115523411 4358477 complement(1564659..1565837) 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_1374 extracellular ligand-binding receptor; extracellular ligand-binding receptor 1565837 4358477 RPE_1390 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_780322.1 1564659 R 316055 CDS YP_780323.1 115523412 4358478 complement(1565920..1567269) 1 NC_008435.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpb:RPB_4203 lytic murein transglycosylase; lytic murein transglycosylase 1567269 4358478 RPE_1391 Rhodopseudomonas palustris BisA53 lytic murein transglycosylase YP_780323.1 1565920 R 316055 CDS YP_780324.1 115523413 4358479 complement(1567266..1567538) 1 NC_008435.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: rpc:RPC_1376 addiction module toxin, RelE/StbE; addiction module antitoxin 1567538 4358479 RPE_1392 Rhodopseudomonas palustris BisA53 addiction module antitoxin YP_780324.1 1567266 R 316055 CDS YP_780325.1 115523414 4358480 complement(1567548..1567901) 1 NC_008435.1 TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: rpc:RPC_1377 RelB antitoxin; addiction module antitoxin 1567901 4358480 RPE_1393 Rhodopseudomonas palustris BisA53 addiction module antitoxin YP_780325.1 1567548 R 316055 CDS YP_780326.1 115523415 4358481 complement(1567940..1569382) 1 NC_008435.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: rpc:RPC_1378 transcriptional regulator, XRE family; XRE family transcriptional regulator 1569382 4358481 RPE_1394 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_780326.1 1567940 R 316055 CDS YP_780327.1 115523416 4358482 1569592..1571226 1 NC_008435.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 1571226 4358482 RPE_1395 Rhodopseudomonas palustris BisA53 isocitrate lyase YP_780327.1 1569592 D 316055 CDS YP_780328.1 115523417 4358483 1571248..1571463 1 NC_008435.1 KEGG: rpa:RPA4393 hypothetical protein; hypothetical protein 1571463 4358483 RPE_1396 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780328.1 1571248 D 316055 CDS YP_780329.1 115523418 4358484 1571696..1572241 1 NC_008435.1 KEGG: nha:Nham_1099 hypothetical protein; hypothetical protein 1572241 4358484 RPE_1397 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780329.1 1571696 D 316055 CDS YP_780330.1 115523419 4358485 complement(1572242..1573141) 1 NC_008435.1 PFAM: metallophosphoesterase; KEGG: rpc:RPC_1382 metallophosphoesterase; metallophosphoesterase 1573141 4358485 RPE_1398 Rhodopseudomonas palustris BisA53 metallophosphoesterase YP_780330.1 1572242 R 316055 CDS YP_780331.1 115523420 4358486 1573285..1573779 1 NC_008435.1 PFAM: NUDIX hydrolase; KEGG: rpb:RPB_4195 NUDIX hydrolase; NUDIX hydrolase 1573779 4358486 RPE_1399 Rhodopseudomonas palustris BisA53 NUDIX hydrolase YP_780331.1 1573285 D 316055 CDS YP_780332.1 115523421 4360166 1574025..1575764 1 NC_008435.1 PFAM: MscS Mechanosensitive ion channel; KEGG: rpb:RPB_4194 MscS mechanosensitive ion channel; mechanosensitive ion channel MscS 1575764 4360166 RPE_1400 Rhodopseudomonas palustris BisA53 mechanosensitive ion channel MscS YP_780332.1 1574025 D 316055 CDS YP_780333.1 115523422 4360167 1575886..1576434 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nha:Nham_3258 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1576434 4360167 RPE_1401 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_780333.1 1575886 D 316055 CDS YP_780334.1 115523423 4360168 complement(1576602..1577123) 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eba:p1B136 putative histone acetyltransferase-related protein; N-acetyltransferase GCN5 1577123 4360168 RPE_1402 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_780334.1 1576602 R 316055 CDS YP_780335.1 115523424 4360169 complement(1577120..1577407) 1 NC_008435.1 KEGG: rpc:RPC_2943 hypothetical protein; hypothetical protein 1577407 4360169 RPE_1403 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780335.1 1577120 R 316055 CDS YP_780336.1 115523425 4360170 complement(1577885..1580224) 1 NC_008435.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpd:RPD_4046 TonB-dependent receptor; TonB-dependent receptor 1580224 4360170 RPE_1404 Rhodopseudomonas palustris BisA53 TonB-dependent receptor YP_780336.1 1577885 R 316055 CDS YP_780337.1 115523426 4360171 complement(1580354..1580734) 1 NC_008435.1 KEGG: rpc:RPC_1404 hypothetical protein; hypothetical protein 1580734 4360171 RPE_1405 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780337.1 1580354 R 316055 CDS YP_780338.1 115523427 4360172 complement(1580966..1581502) 1 NC_008435.1 KEGG: rpc:RPC_1403 hypothetical protein; hypothetical protein 1581502 4360172 RPE_1406 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780338.1 1580966 R 316055 CDS YP_780339.1 115523428 4360173 complement(1581531..1581833) 1 NC_008435.1 KEGG: rpa:RPA4382 hypothetical protein; hypothetical protein 1581833 4360173 RPE_1407 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780339.1 1581531 R 316055 CDS YP_780340.1 115523429 4360174 1582009..1582473 1 NC_008435.1 KEGG: rpc:RPC_1401 hypothetical protein; hypothetical protein 1582473 4360174 RPE_1408 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780340.1 1582009 D 316055 CDS YP_780341.1 115523430 4360175 1582561..1583241 1 NC_008435.1 PFAM: ribonuclease T2; KEGG: rpc:RPC_1400 ribonuclease T2; ribonuclease T2 1583241 4360175 RPE_1409 Rhodopseudomonas palustris BisA53 ribonuclease T2 YP_780341.1 1582561 D 316055 CDS YP_780342.1 115523431 4360176 1583403..1584386 1 NC_008435.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: rpc:RPC_1399 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 1584386 4360176 RPE_1410 Rhodopseudomonas palustris BisA53 riboflavin biosynthesis protein RibF YP_780342.1 1583403 D 316055 CDS YP_780343.1 115523432 4360177 1584407..1584943 1 NC_008435.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rpc:RPC_1398 transferase hexapeptide repeat; hexapaptide repeat-containing transferase 1584943 4360177 RPE_1411 Rhodopseudomonas palustris BisA53 hexapaptide repeat-containing transferase YP_780343.1 1584407 D 316055 CDS YP_780344.1 115523433 4360178 complement(1584953..1585399) 1 NC_008435.1 KEGG: rpb:RPB_4184 hypothetical protein; hypothetical protein 1585399 4360178 RPE_1412 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780344.1 1584953 R 316055 CDS YP_780345.1 115523434 4360179 complement(1585406..1585816) 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; KEGG: rpb:RPB_4183 hypothetical protein; hypothetical protein 1585816 4360179 RPE_1413 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780345.1 1585406 R 316055 CDS YP_780346.1 115523435 4360180 1585972..1589148 1 NC_008435.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1589148 ileS 4360180 ileS Rhodopseudomonas palustris BisA53 isoleucyl-tRNA synthetase YP_780346.1 1585972 D 316055 CDS YP_780347.1 115523436 4360181 1589215..1589814 1 NC_008435.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1589814 4360181 RPE_1415 Rhodopseudomonas palustris BisA53 lipoprotein signal peptidase YP_780347.1 1589215 D 316055 CDS YP_780348.1 115523437 4360182 1589893..1590630 1 NC_008435.1 KEGG: rpc:RPC_1393 hypothetical protein; hypothetical protein 1590630 4360182 RPE_1416 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780348.1 1589893 D 316055 CDS YP_780349.1 115523438 4357809 1590660..1592069 1 NC_008435.1 PFAM: peptidase M16 domain protein; KEGG: rpc:RPC_1392 peptidase M16-like; peptidase M16 domain-containing protein 1592069 4357809 RPE_1417 Rhodopseudomonas palustris BisA53 peptidase M16 domain-containing protein YP_780349.1 1590660 D 316055 CDS YP_780350.1 115523439 4357810 1592066..1593442 1 NC_008435.1 PFAM: peptidase M16 domain protein; KEGG: rpc:RPC_1391 peptidase M16-like; peptidase M16 domain-containing protein 1593442 4357810 RPE_1418 Rhodopseudomonas palustris BisA53 peptidase M16 domain-containing protein YP_780350.1 1592066 D 316055 CDS YP_780351.1 115523440 4357811 1593768..1594193 1 NC_008435.1 PFAM: Class I peptide chain release factor; KEGG: bja:blr7486 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein 1594193 4357811 RPE_1419 Rhodopseudomonas palustris BisA53 peptidyl-tRNA hydrolase domain-containing protein YP_780351.1 1593768 D 316055 CDS YP_780352.1 115523441 4357812 1594417..1596228 1 NC_008435.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 1596228 mutL 4357812 mutL Rhodopseudomonas palustris BisA53 DNA mismatch repair protein YP_780352.1 1594417 D 316055 CDS YP_780353.1 115523442 4357813 1596408..1596671 1 NC_008435.1 KEGG: ava:Ava_B0335 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain; CopG/Arc/MetJ family transcriptional regulator 1596671 4357813 RPE_1421 Rhodopseudomonas palustris BisA53 CopG/Arc/MetJ family transcriptional regulator YP_780353.1 1596408 D 316055 CDS YP_780354.1 115523443 4357815 complement(1597180..1598292) 1 NC_008435.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1598292 4357815 RPE_1423 Rhodopseudomonas palustris BisA53 branched-chain amino acid aminotransferase YP_780354.1 1597180 R 316055 CDS YP_780355.1 115523444 4357816 1598571..1599119 1 NC_008435.1 PFAM: regulatory protein, MarR; KEGG: rpc:RPC_1387 transcriptional regulator, MarR family; MarR family transcriptional regulator 1599119 4357816 RPE_1424 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_780355.1 1598571 D 316055 CDS YP_780356.1 115523445 4357817 1599116..1599838 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_1386 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1599838 4357817 RPE_1425 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_780356.1 1599116 D 316055 CDS YP_780357.1 115523446 4357818 1600130..1601518 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_1385 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase 1601518 4357818 RPE_1426 Rhodopseudomonas palustris BisA53 sensor signal transduction histidine kinase YP_780357.1 1600130 D 316055 CDS YP_780358.1 115523447 4357819 complement(1601712..1602578) 1 NC_008435.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 1602578 4357819 RPE_1427 Rhodopseudomonas palustris BisA53 pyrroline-5-carboxylate reductase YP_780358.1 1601712 R 316055 CDS YP_780359.1 115523448 4357820 complement(1602664..1603164) 1 NC_008435.1 KEGG: rpc:RPC_1407 hypothetical protein; hypothetical protein 1603164 4357820 RPE_1428 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780359.1 1602664 R 316055 CDS YP_780360.1 115523449 4357821 1603589..1604104 1 NC_008435.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; riboflavin synthase subunit beta 1604104 4357821 RPE_1429 Rhodopseudomonas palustris BisA53 riboflavin synthase subunit beta YP_780360.1 1603589 D 316055 CDS YP_780361.1 115523450 4357822 complement(1604491..1605444) 1 NC_008435.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1605444 4357822 RPE_1430 Rhodopseudomonas palustris BisA53 ribose-phosphate pyrophosphokinase YP_780361.1 1604491 R 316055 CDS YP_780362.1 115523451 4357823 complement(1605619..1606236) 1 NC_008435.1 KEGG: rpc:RPC_1410 hypothetical protein; hypothetical protein 1606236 4357823 RPE_1431 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780362.1 1605619 R 316055 CDS YP_780363.1 115523452 4357824 complement(1606409..1607176) 1 NC_008435.1 PFAM: protein of unknown function DUF152; KEGG: rpa:RPA4360 DUF152; hypothetical protein 1607176 4357824 RPE_1432 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780363.1 1606409 R 316055 CDS YP_780364.1 115523453 4357825 complement(1607173..1608291) 1 NC_008435.1 PFAM: protein of unknown function DUF185; KEGG: rpc:RPC_1412 protein of unknown function DUF185; hypothetical protein 1608291 4357825 RPE_1433 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780364.1 1607173 R 316055 CDS YP_780365.1 115523454 4357826 complement(1608311..1609156) 1 NC_008435.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1609156 4357826 RPE_1434 Rhodopseudomonas palustris BisA53 prolipoprotein diacylglyceryl transferase YP_780365.1 1608311 R 316055 CDS YP_780366.1 115523455 4358591 1609418..1609699 1 NC_008435.1 PFAM: protein of unknown function DUF526; KEGG: rpc:RPC_1414 protein of unknown function DUF526; hypothetical protein 1609699 4358591 RPE_1435 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780366.1 1609418 D 316055 CDS YP_780367.1 115523456 4358593 1611252..1611956 1 NC_008435.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 1611956 4358593 RPE_1437 Rhodopseudomonas palustris BisA53 50S ribosomal protein L25/general stress protein Ctc YP_780367.1 1611252 D 316055 CDS YP_780368.1 115523457 4358594 1611978..1612583 1 NC_008435.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1612583 4358594 RPE_1438 Rhodopseudomonas palustris BisA53 peptidyl-tRNA hydrolase YP_780368.1 1611978 D 316055 CDS YP_780369.1 115523458 4358595 1612672..1613835 1 NC_008435.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1613835 4358595 RPE_1439 Rhodopseudomonas palustris BisA53 GTP-dependent nucleic acid-binding protein EngD YP_780369.1 1612672 D 316055 CDS YP_780370.1 115523459 4358596 complement(1614010..1614303) 1 NC_008435.1 KEGG: rpb:RPB_4158 hypothetical protein; hypothetical protein 1614303 4358596 RPE_1440 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780370.1 1614010 R 316055 CDS YP_780371.1 115523460 4358597 1614414..1614869 1 NC_008435.1 PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_1419 MaoC-like dehydratase; dehydratase 1614869 4358597 RPE_1441 Rhodopseudomonas palustris BisA53 dehydratase YP_780371.1 1614414 D 316055 CDS YP_780372.1 115523461 4358598 1614879..1615361 1 NC_008435.1 PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_1420 MaoC-like dehydratase; dehydratase 1615361 4358598 RPE_1442 Rhodopseudomonas palustris BisA53 dehydratase YP_780372.1 1614879 D 316055 CDS YP_780373.1 115523462 4358599 1615503..1615661 1 NC_008435.1 KEGG: rpc:RPC_1421 hypothetical protein; hypothetical protein 1615661 4358599 RPE_1443 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780373.1 1615503 D 316055 CDS YP_780374.1 115523463 4358600 complement(1615769..1616200) 1 NC_008435.1 KEGG: rpc:RPC_1422 hypothetical protein; hypothetical protein 1616200 4358600 RPE_1444 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780374.1 1615769 R 316055 CDS YP_780375.1 115523464 4358601 complement(1616377..1616634) 1 NC_008435.1 KEGG: rpc:RPC_1424 hypothetical protein; hypothetical protein 1616634 4358601 RPE_1445 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780375.1 1616377 R 316055 CDS YP_780376.1 115523465 4358602 complement(1616732..1617433) 1 NC_008435.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpa:RPA3992 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 1617433 4358602 RPE_1446 Rhodopseudomonas palustris BisA53 fumarylacetoacetate (FAA) hydrolase YP_780376.1 1616732 R 316055 CDS YP_780377.1 115523466 4358603 complement(1617505..1619307) 1 NC_008435.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1426 ABC transporter related; ABC transporter-like protein 1619307 4358603 RPE_1447 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780377.1 1617505 R 316055 CDS YP_780378.1 115523467 4358604 complement(1619486..1620499) 1 NC_008435.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rpc:RPC_1427 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 1620499 4358604 RPE_1448 Rhodopseudomonas palustris BisA53 UDP-glucose 4-epimerase YP_780378.1 1619486 R 316055 CDS YP_780379.1 115523468 4358605 1620734..1621678 1 NC_008435.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase, family 9; KEGG: rpc:RPC_1428 lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase I 1621678 4358605 RPE_1449 Rhodopseudomonas palustris BisA53 lipopolysaccharide heptosyltransferase I YP_780379.1 1620734 D 316055 CDS YP_780380.1 115523469 4358606 complement(1621675..1622208) 1 NC_008435.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: rpc:RPC_1429 HAD-superfamily hydrolase subfamily IIIA; histidinol-phosphate phosphatase family protein 1622208 4358606 RPE_1450 Rhodopseudomonas palustris BisA53 histidinol-phosphate phosphatase family protein YP_780380.1 1621675 R 316055 CDS YP_780381.1 115523470 4358607 complement(1622205..1623290) 1 NC_008435.1 TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase, family 9; KEGG: rpc:RPC_1430 lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase II 1623290 4358607 RPE_1451 Rhodopseudomonas palustris BisA53 lipopolysaccharide heptosyltransferase II YP_780381.1 1622205 R 316055 CDS YP_780382.1 115523471 4359243 1623466..1624446 1 NC_008435.1 TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rpb:RPB_1602 ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 1624446 4359243 RPE_1452 Rhodopseudomonas palustris BisA53 ADP-L-glycero-D-manno-heptose-6-epimerase YP_780382.1 1623466 D 316055 CDS YP_780383.1 115523472 4359244 1624458..1625930 1 NC_008435.1 TIGRFAM: cytidyltransferase-related domain; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: rpc:RPC_1432 RfaE bifunctional protein, domain I; rfaE bifunctional protein 1625930 4359244 RPE_1453 Rhodopseudomonas palustris BisA53 rfaE bifunctional protein YP_780383.1 1624458 D 316055 CDS YP_780384.1 115523473 4359245 1625927..1626910 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rpc:RPC_1433 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1626910 4359245 RPE_1454 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_780384.1 1625927 D 316055 CDS YP_780385.1 115523474 4359246 1627096..1628100 1 NC_008435.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: rpc:RPC_1434 oxidoreductase-like; oxidoreductase domain-containing protein 1628100 4359246 RPE_1455 Rhodopseudomonas palustris BisA53 oxidoreductase domain-containing protein YP_780385.1 1627096 D 316055 CDS YP_780386.1 115523475 4359247 1628197..1629345 1 NC_008435.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: rpd:RPD_1620 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 1629345 4359247 RPE_1456 Rhodopseudomonas palustris BisA53 DegT/DnrJ/EryC1/StrS aminotransferase YP_780386.1 1628197 D 316055 CDS YP_780387.1 115523476 4359248 1629539..1631068 1 NC_008435.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: rpc:RPC_1436 integral membrane protein MviN; integral membrane protein MviN 1631068 4359248 RPE_1457 Rhodopseudomonas palustris BisA53 integral membrane protein MviN YP_780387.1 1629539 D 316055 CDS YP_780388.1 115523477 4359249 complement(1631065..1632957) 1 NC_008435.1 PFAM: Carbamoyltransferase; KEGG: rpc:RPC_1437 carbamoyltransferase; carbamoyltransferase 1632957 4359249 RPE_1458 Rhodopseudomonas palustris BisA53 carbamoyltransferase YP_780388.1 1631065 R 316055 CDS YP_780389.1 115523478 4359250 1633229..1633615 1 NC_008435.1 KEGG: rpc:RPC_1438 hypothetical protein; hypothetical protein 1633615 4359250 RPE_1459 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780389.1 1633229 D 316055 CDS YP_780390.1 115523479 4359251 1633798..1636101 1 NC_008435.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpc:RPC_1439 carbon-monoxide dehydrogenase; carbon-monoxide dehydrogenase 1636101 4359251 RPE_1460 Rhodopseudomonas palustris BisA53 carbon-monoxide dehydrogenase YP_780390.1 1633798 D 316055 CDS YP_780391.1 115523480 4359252 1636299..1636748 1 NC_008435.1 PFAM: cytochrome c, class II; KEGG: rpc:RPC_1440 cytochrome c, class II; cytochrome c, class II 1636748 4359252 RPE_1461 Rhodopseudomonas palustris BisA53 cytochrome c, class II YP_780391.1 1636299 D 316055 CDS YP_780392.1 115523481 4359253 1636785..1637882 1 NC_008435.1 KEGG: rpc:RPC_1441 putative diheme cytochrome c-553; putative diheme cytochrome c-553 1637882 4359253 RPE_1462 Rhodopseudomonas palustris BisA53 putative diheme cytochrome c-553 YP_780392.1 1636785 D 316055 CDS YP_780393.1 115523482 4359254 1638263..1639072 1 NC_008435.1 KEGG: rpc:RPC_1443 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1639072 4359254 RPE_1463 Rhodopseudomonas palustris BisA53 phosphomethylpyrimidine kinase YP_780393.1 1638263 D 316055 CDS YP_780394.1 115523483 4359255 1639228..1639884 1 NC_008435.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_1444 phosphatidylethanolamine N-methyltransferase; phosphatidylethanolamine N-methyltransferase 1639884 4359255 RPE_1464 Rhodopseudomonas palustris BisA53 phosphatidylethanolamine N-methyltransferase YP_780394.1 1639228 D 316055 CDS YP_780395.1 115523484 4359256 1639939..1640736 1 NC_008435.1 PFAM: metallophosphoesterase; KEGG: rpc:RPC_1445 metallophosphoesterase; metallophosphoesterase 1640736 4359256 RPE_1465 Rhodopseudomonas palustris BisA53 metallophosphoesterase YP_780395.1 1639939 D 316055 CDS YP_780396.1 115523485 4359257 1640738..1641793 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: rpc:RPC_1446 glycosyl transferase, group 1; group 1 glycosyl transferase 1641793 4359257 RPE_1466 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_780396.1 1640738 D 316055 CDS YP_780397.1 115523486 4359258 1641860..1642897 1 NC_008435.1 PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rpc:RPC_1447 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent enzyme subunit beta 1642897 4359258 RPE_1467 Rhodopseudomonas palustris BisA53 pyridoxal-5'-phosphate-dependent enzyme subunit beta YP_780397.1 1641860 D 316055 CDS YP_780398.1 115523487 4359259 complement(1642867..1644231) 1 NC_008435.1 KEGG: rpc:RPC_1449 hypothetical protein; hypothetical protein 1644231 4359259 RPE_1468 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780398.1 1642867 R 316055 CDS YP_780399.1 115523488 4359260 1644308..1645498 1 NC_008435.1 PFAM: nucleoside:H+ symporter; major facilitator superfamily MFS_1; KEGG: rpc:RPC_1450 major facilitator superfamily MFS_1; major facilitator transporter 1645498 4359260 RPE_1469 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_780399.1 1644308 D 316055 CDS YP_780400.1 115523489 4359175 complement(1645505..1646515) 1 NC_008435.1 PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: rpc:RPC_1451 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein 1646515 4359175 RPE_1470 Rhodopseudomonas palustris BisA53 mandelate racemase/muconate lactonizing protein YP_780400.1 1645505 R 316055 CDS YP_780401.1 115523490 4359176 1646683..1647816 1 NC_008435.1 PFAM: protein of unknown function DUF140; KEGG: rpc:RPC_1452 protein of unknown function DUF140; hypothetical protein 1647816 4359176 RPE_1471 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780401.1 1646683 D 316055 CDS YP_780402.1 115523491 4359177 1647819..1648589 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1453 ABC transporter related; ABC transporter-like protein 1648589 4359177 RPE_1472 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780402.1 1647819 D 316055 CDS YP_780403.1 115523492 4359178 1648606..1649487 1 NC_008435.1 PFAM: Mammalian cell entry related domain protein; KEGG: rpc:RPC_1454 mammalian cell entry related; hypothetical protein 1649487 4359178 RPE_1473 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780403.1 1648606 D 316055 CDS YP_780404.1 115523493 4359179 complement(1649891..1656244) 1 NC_008435.1 KEGG: rpc:RPC_1455 hypothetical protein; hypothetical protein 1656244 4359179 RPE_1474 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780404.1 1649891 R 316055 CDS YP_780405.1 115523494 4359180 1656549..1656923 1 NC_008435.1 PFAM: Hpt domain protein; KEGG: rpc:RPC_1456 Hpt domain protein; Hpt protein 1656923 4359180 RPE_1475 Rhodopseudomonas palustris BisA53 Hpt protein YP_780405.1 1656549 D 316055 CDS YP_780406.1 115523495 4359181 1657054..1657374 1 NC_008435.1 PFAM: ferredoxin; KEGG: rpc:RPC_1457 ferredoxin; ferredoxin 1657374 4359181 RPE_1476 Rhodopseudomonas palustris BisA53 ferredoxin YP_780406.1 1657054 D 316055 CDS YP_780407.1 115523496 4359182 complement(1657518..1657973) 1 NC_008435.1 PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_1644 thioesterase superfamily; thioesterase superfamily protein 1657973 4359182 RPE_1477 Rhodopseudomonas palustris BisA53 thioesterase superfamily protein YP_780407.1 1657518 R 316055 CDS YP_780408.1 115523497 4359183 1658149..1659177 1 NC_008435.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: rpd:RPD_1645 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin-disulfide reductase 1659177 4359183 RPE_1478 Rhodopseudomonas palustris BisA53 thioredoxin-disulfide reductase YP_780408.1 1658149 D 316055 CDS YP_780409.1 115523498 4359184 complement(1659270..1659551) 1 NC_008435.1 hypothetical protein 1659551 4359184 RPE_1479 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780409.1 1659270 R 316055 CDS YP_780410.1 115523499 4359185 complement(1659880..1660167) 1 NC_008435.1 KEGG: rpa:RPA3375 hypothetical protein; hypothetical protein 1660167 4359185 RPE_1480 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780410.1 1659880 R 316055 CDS YP_780411.1 115523500 4359186 complement(1660183..1663383) 1 NC_008435.1 KEGG: cgb:cg3398 DNA or RNA helicase of superfamily II; superfamily II DNA/RNA helicase 1663383 4359186 RPE_1481 Rhodopseudomonas palustris BisA53 superfamily II DNA/RNA helicase YP_780411.1 1660183 R 316055 CDS YP_780412.1 115523501 4359187 1663841..1665436 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_1221 periplasmic sensor hybrid histidine kinase; periplasmic sensor hybrid histidine kinase 1665436 4359187 RPE_1482 Rhodopseudomonas palustris BisA53 periplasmic sensor hybrid histidine kinase YP_780412.1 1663841 D 316055 CDS YP_780413.1 115523502 4359188 complement(1665555..1668047) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; KEGG: rpc:RPC_1464 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 1668047 4359188 RPE_1483 Rhodopseudomonas palustris BisA53 diguanylate cyclase/phosphodiesterase YP_780413.1 1665555 R 316055 CDS YP_780414.1 115523503 4359189 1668457..1669137 1 NC_008435.1 KEGG: rpc:RPC_1465 hypothetical protein; hypothetical protein 1669137 4359189 RPE_1484 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780414.1 1668457 D 316055 CDS YP_780415.1 115523504 4359190 complement(1669180..1669878) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_1466 diguanylate cyclase (GGDEF domain); diguanylate cyclase 1669878 4359190 RPE_1485 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_780415.1 1669180 R 316055 CDS YP_780416.1 115523505 4359191 complement(1670079..1671176) 1 NC_008435.1 PFAM: cobalamin B12-binding domain protein; KEGG: rpc:RPC_1467 cobalamin B12-binding; cobalamin B12-binding domain-containing protein 1671176 4359191 RPE_1486 Rhodopseudomonas palustris BisA53 cobalamin B12-binding domain-containing protein YP_780416.1 1670079 R 316055 CDS YP_780417.1 115523506 4358730 complement(1671544..1673553) 1 NC_008435.1 KEGG: rpc:RPC_1468 hypothetical protein; hypothetical protein 1673553 4358730 RPE_1487 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780417.1 1671544 R 316055 CDS YP_780418.1 115523507 4358731 complement(1673612..1674130) 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: stm:STM2905 putative acetyltransferase; N-acetyltransferase GCN5 1674130 4358731 RPE_1488 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_780418.1 1673612 R 316055 CDS YP_780419.1 115523508 4358732 complement(1674127..1674402) 1 NC_008435.1 KEGG: plu:plu3889 hypothetical protein; hypothetical protein 1674402 4358732 RPE_1489 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780419.1 1674127 R 316055 CDS YP_780420.1 115523509 4358733 complement(1674484..1675584) 1 NC_008435.1 KEGG: rpc:RPC_1469 hypothetical protein; hypothetical protein 1675584 4358733 RPE_1490 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780420.1 1674484 R 316055 CDS YP_780421.1 115523510 4358734 1675977..1676483 1 NC_008435.1 PFAM: protein of unknown function DUF892; KEGG: rpc:RPC_1470 protein of unknown function DUF892; hypothetical protein 1676483 4358734 RPE_1491 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780421.1 1675977 D 316055 CDS YP_780422.1 115523511 4358735 complement(1676580..1677014) 1 NC_008435.1 KEGG: rpc:RPC_1471 hypothetical protein; hypothetical protein 1677014 4358735 RPE_1492 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780422.1 1676580 R 316055 CDS YP_780423.1 115523512 4358736 1677130..1677744 1 NC_008435.1 KEGG: rpc:RPC_1472 hypothetical protein; hypothetical protein 1677744 4358736 RPE_1493 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780423.1 1677130 D 316055 CDS YP_780424.1 115523513 4358737 1677975..1679192 1 NC_008435.1 hypothetical protein 1679192 4358737 RPE_1494 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780424.1 1677975 D 316055 CDS YP_780425.1 115523514 4358738 complement(1680163..1680411) 1 NC_008435.1 KEGG: bcl:ABC1987 hypothetical protein; hypothetical protein 1680411 4358738 RPE_1495 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780425.1 1680163 R 316055 CDS YP_780426.1 115523515 4358739 1680521..1682032 1 NC_008435.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_3408 ErfK/YbiS/YcfS/YnhG; hypothetical protein 1682032 4358739 RPE_1496 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780426.1 1680521 D 316055 CDS YP_780427.1 115523516 4358740 complement(1682144..1682569) 1 NC_008435.1 PFAM: UspA domain protein; KEGG: rpc:RPC_1477 UspA; UspA domain-containing protein 1682569 4358740 RPE_1497 Rhodopseudomonas palustris BisA53 UspA domain-containing protein YP_780427.1 1682144 R 316055 CDS YP_780428.1 115523517 4358741 complement(1682658..1683200) 1 NC_008435.1 PFAM: Phosphoglycerate mutase; KEGG: rpc:RPC_1478 putative phosphohistidine phosphatase, SixA; putative phosphohistidine phosphatase SixA 1683200 4358741 RPE_1498 Rhodopseudomonas palustris BisA53 putative phosphohistidine phosphatase SixA YP_780428.1 1682658 R 316055 CDS YP_780429.1 115523518 4358742 1683355..1684782 1 NC_008435.1 PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_1479 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1684782 4358742 RPE_1499 Rhodopseudomonas palustris BisA53 FAD dependent oxidoreductase YP_780429.1 1683355 D 316055 CDS YP_780430.1 115523519 4358743 1684858..1685355 1 NC_008435.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1685355 4358743 RPE_1500 Rhodopseudomonas palustris BisA53 methionine sulfoxide reductase B YP_780430.1 1684858 D 316055 CDS YP_780431.1 115523520 4358744 complement(1685580..1685849) 1 NC_008435.1 KEGG: rpa:RPA3935 hypothetical protein; hypothetical protein 1685849 4358744 RPE_1501 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780431.1 1685580 R 316055 CDS YP_780432.1 115523521 4358745 complement(1685853..1686125) 1 NC_008435.1 hypothetical protein 1686125 4358745 RPE_1502 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780432.1 1685853 R 316055 CDS YP_780433.1 115523522 4358746 1686221..1688029 1 NC_008435.1 PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: rpb:RPB_3817 hypothetical protein; flagellar basal body FlaE domain-containing protein 1688029 4358746 RPE_1503 Rhodopseudomonas palustris BisA53 flagellar basal body FlaE domain-containing protein YP_780433.1 1686221 D 316055 CDS YP_780434.1 115523523 4358747 1688078..1689967 1 NC_008435.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rpc:RPC_1486 flagellar hook-associated protein; flagellar hook-associated protein 1689967 4358747 RPE_1504 Rhodopseudomonas palustris BisA53 flagellar hook-associated protein YP_780434.1 1688078 D 316055 CDS YP_780435.1 115523524 4359941 1689976..1691580 1 NC_008435.1 KEGG: rpa:RPA3930 hypothetical protein; hypothetical protein 1691580 4359941 RPE_1505 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780435.1 1689976 D 316055 CDS YP_780436.1 115523525 4359942 1691859..1692446 1 NC_008435.1 KEGG: cbu:CBU_0674 sugar isomerase family protein; sugar isomerase 1692446 4359942 RPE_1506 Rhodopseudomonas palustris BisA53 sugar isomerase YP_780436.1 1691859 D 316055 CDS YP_780437.1 115523526 4359943 1692446..1693006 1 NC_008435.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: cbu:CBU_0673 histidine biosynthesis bifunctional protein HisB; histidinol-phosphate phosphatase family protein 1693006 4359943 RPE_1507 Rhodopseudomonas palustris BisA53 histidinol-phosphate phosphatase family protein YP_780437.1 1692446 D 316055 CDS YP_780438.1 115523527 4359944 1692993..1693775 1 NC_008435.1 similar to novel fructose-6-phosphate aldolase from Escherichia coli; enzyme from Methanocaldococcus janaschii shows transaldolase activity; putative translaldolase 1693775 4359944 RPE_1508 Rhodopseudomonas palustris BisA53 putative translaldolase YP_780438.1 1692993 D 316055 CDS YP_780439.1 115523528 4359945 1693759..1694772 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cbu:CBU_0676 NAD dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1694772 4359945 RPE_1509 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_780439.1 1693759 D 316055 CDS YP_780440.1 115523529 4359946 1694783..1695778 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: cbu:CBU_0677 NAD dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 1695778 4359946 RPE_1510 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_780440.1 1694783 D 316055 CDS YP_780441.1 115523530 4359947 1695791..1697341 1 NC_008435.1 TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: cbu:CBU_0678 ADP-heptose synthase, putative; cytidyltransferase-like protein 1697341 4359947 RPE_1511 Rhodopseudomonas palustris BisA53 cytidyltransferase-like protein YP_780441.1 1695791 D 316055 CDS YP_780442.1 115523531 4359948 1697346..1698287 1 NC_008435.1 PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain; KEGG: cbu:CBU_0679 oxidoreductase, Gfo/Idh/MocA family; oxidoreductase domain-containing protein 1698287 4359948 RPE_1512 Rhodopseudomonas palustris BisA53 oxidoreductase domain-containing protein YP_780442.1 1697346 D 316055 CDS YP_780443.1 115523532 4359949 1698284..1699561 1 NC_008435.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: cbu:CBU_0680 UDP-glucose/GDP-mannose dehydrogenase family protein; UDP-glucose/GDP-mannose dehydrogenase 1699561 4359949 RPE_1513 Rhodopseudomonas palustris BisA53 UDP-glucose/GDP-mannose dehydrogenase YP_780443.1 1698284 D 316055 CDS YP_780444.1 115523533 4359950 1699572..1700450 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: cbu:CBU_0681 hypothetical protein; NAD-dependent epimerase/dehydratase 1700450 4359950 RPE_1514 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_780444.1 1699572 D 316055 CDS YP_780445.1 115523534 4359951 1700443..1701099 1 NC_008435.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cbu:CBU_0682 hypothetical protein; type 11 methyltransferase 1701099 4359951 RPE_1515 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_780445.1 1700443 D 316055 CDS YP_780446.1 115523535 4359952 1701137..1702129 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rpa:RPA3925 putative dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1702129 4359952 RPE_1516 Rhodopseudomonas palustris BisA53 dTDP-glucose 4,6-dehydratase YP_780446.1 1701137 D 316055 CDS YP_780447.1 115523536 4359953 1702134..1702955 1 NC_008435.1 PFAM: Transketolase domain protein; KEGG: mag:amb0066 putative transketolase N-terminal section; transketolase domain-containing protein 1702955 4359953 RPE_1517 Rhodopseudomonas palustris BisA53 transketolase domain-containing protein YP_780447.1 1702134 D 316055 CDS YP_780448.1 115523537 4359954 1702959..1703876 1 NC_008435.1 PFAM: Transketolase, central region; Transketolase domain protein; KEGG: bja:blr5427 hypothetical transketolase family protein; transketolase, central region 1703876 4359954 RPE_1518 Rhodopseudomonas palustris BisA53 transketolase, central region YP_780448.1 1702959 D 316055 CDS YP_780449.1 115523538 4359955 1703899..1704396 1 NC_008435.1 KEGG: mag:amb0076 hypothetical protein; hypothetical protein 1704396 4359955 RPE_1519 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780449.1 1703899 D 316055 CDS YP_780450.1 115523539 4359956 1704428..1705102 1 NC_008435.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nfa:nfa29060 hypothetical protein; type 11 methyltransferase 1705102 4359956 RPE_1520 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_780450.1 1704428 D 316055 CDS YP_780451.1 115523540 4359957 1705201..1706361 1 NC_008435.1 PFAM: aminotransferase, class V; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mag:amb0075 predicted pyridoxal phosphate-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase 1706361 4359957 RPE_1521 Rhodopseudomonas palustris BisA53 DegT/DnrJ/EryC1/StrS aminotransferase YP_780451.1 1705201 D 316055 CDS YP_780452.1 115523541 4358068 1706404..1707177 1 NC_008435.1 PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: nwi:Nwi_0650 hypothetical protein; type 11 methyltransferase 1707177 4358068 RPE_1522 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_780452.1 1706404 D 316055 CDS YP_780453.1 115523542 4358069 1707639..1710302 1 NC_008435.1 structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellin 1710302 4358069 RPE_1523 Rhodopseudomonas palustris BisA53 flagellin YP_780453.1 1707639 D 316055 CDS YP_780454.1 115523543 4358070 complement(1710583..1712781) 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpb:RPB_3801 TPR repeat protein; hypothetical protein 1712781 4358070 RPE_1524 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780454.1 1710583 R 316055 CDS YP_780455.1 115523544 4358071 1713307..1715964 1 NC_008435.1 structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellin 1715964 4358071 RPE_1525 Rhodopseudomonas palustris BisA53 flagellin YP_780455.1 1713307 D 316055 CDS YP_780456.1 115523545 4358072 1716190..1716567 1 NC_008435.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA; Bradyrhizobium has one thick and several thin flagella, the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 1716567 flbT 4358072 flbT Rhodopseudomonas palustris BisA53 flagellar biosynthesis repressor FlbT YP_780456.1 1716190 D 316055 CDS YP_780457.1 115523546 4358073 1716571..1716936 1 NC_008435.1 acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar biosynthesis regulatory protein FlaF 1716936 flaF 4358073 flaF Rhodopseudomonas palustris BisA53 flagellar biosynthesis regulatory protein FlaF YP_780457.1 1716571 D 316055 CDS YP_780458.1 115523547 4358074 complement(1717074..1717448) 1 NC_008435.1 KEGG: rpc:RPC_1493 hypothetical protein; hypothetical protein 1717448 4358074 RPE_1528 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780458.1 1717074 R 316055 CDS YP_780459.1 115523548 4358075 complement(1717623..1718114) 1 NC_008435.1 KEGG: rpc:RPC_1495 hypothetical protein; hypothetical protein 1718114 4358075 RPE_1529 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780459.1 1717623 R 316055 CDS YP_780460.1 115523549 4358076 complement(1718134..1718478) 1 NC_008435.1 KEGG: rpc:RPC_1496 hypothetical protein; chemotactic signal-response protein CheL 1718478 4358076 RPE_1530 Rhodopseudomonas palustris BisA53 chemotactic signal-response protein CheL YP_780460.1 1718134 R 316055 CDS YP_780461.1 115523550 4358077 complement(1718478..1719614) 1 NC_008435.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1719614 flgI 4358077 flgI Rhodopseudomonas palustris BisA53 flagellar basal body P-ring protein YP_780461.1 1718478 R 316055 CDS YP_780462.1 115523551 4358078 1719924..1720334 1 NC_008435.1 regulator of the sigma 54 transcriptional activator FlbD; represses FlbD when the class II flagellar structure is absent and activates FlbD when the structure is present; flagellar assembly regulator FliX 1720334 fliX 4358078 fliX Rhodopseudomonas palustris BisA53 flagellar assembly regulator FliX YP_780462.1 1719924 D 316055 CDS YP_780463.1 115523552 4358079 1720501..1720911 1 NC_008435.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: rpc:RPC_1499 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator 1720911 4358079 RPE_1533 Rhodopseudomonas palustris BisA53 TraR/DksA family transcriptional regulator YP_780463.1 1720501 D 316055 CDS YP_780464.1 115523553 4358080 1721746..1723446 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4407 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1723446 4358080 RPE_1534 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780464.1 1721746 D 316055 CDS YP_780465.1 115523554 4358081 complement(1723744..1724502) 1 NC_008435.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 1724502 flgH 4358081 flgH Rhodopseudomonas palustris BisA53 flagellar basal body L-ring protein YP_780465.1 1723744 R 316055 CDS YP_780466.1 115523555 4358082 complement(1724508..1725566) 1 NC_008435.1 required for the assembly of the flagellar basal body P-ring; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 1725566 flgA 4358082 flgA Rhodopseudomonas palustris BisA53 flagellar basal body P-ring biosynthesis protein FlgA YP_780466.1 1724508 R 316055 CDS YP_780467.1 115523556 4358083 complement(1725574..1726362) 1 NC_008435.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 1726362 flgG 4358083 flgG Rhodopseudomonas palustris BisA53 flagellar basal body rod protein FlgG YP_780467.1 1725574 R 316055 CDS YP_780468.1 115523557 4358084 complement(1726384..1727148) 1 NC_008435.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgF 1727148 flgF 4358084 flgF Rhodopseudomonas palustris BisA53 flagellar basal body rod protein FlgF YP_780468.1 1726384 R 316055 CDS YP_780469.1 115523558 4358085 1727502..1727996 1 NC_008435.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1727996 fliL 4358085 fliL Rhodopseudomonas palustris BisA53 flagellar basal body-associated protein FliL YP_780469.1 1727502 D 316055 CDS YP_780470.1 115523559 4360235 1728015..1729226 1 NC_008435.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar motor switch protein FliM 1729226 fliM 4360235 fliM Rhodopseudomonas palustris BisA53 flagellar motor switch protein FliM YP_780470.1 1728015 D 316055 CDS YP_780471.1 115523560 4360236 1729223..1729657 1 NC_008435.1 KEGG: rpc:RPC_1510 hypothetical protein; hypothetical protein 1729657 4360236 RPE_1541 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780471.1 1729223 D 316055 CDS YP_780472.1 115523561 4360237 1729654..1730403 1 NC_008435.1 KEGG: rpc:RPC_1511 hypothetical protein; hypothetical protein 1730403 4360237 RPE_1542 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780472.1 1729654 D 316055 CDS YP_780473.1 115523562 4360238 1730513..1734385 1 NC_008435.1 KEGG: rpc:RPC_1512 tetratricopeptide TPR_2; hypothetical protein 1734385 4360238 RPE_1543 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780473.1 1730513 D 316055 CDS YP_780474.1 115523563 4360239 1734585..1735865 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: xcb:XC_1456 transmembrane transport protein; major facilitator transporter 1735865 4360239 RPE_1544 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_780474.1 1734585 D 316055 CDS YP_780475.1 115523564 4360240 complement(1735975..1737678) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_3380 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1737678 4360240 RPE_1545 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780475.1 1735975 R 316055 CDS YP_780476.1 115523565 4360241 complement(1738050..1739312) 1 NC_008435.1 KEGG: rpd:RPD_3191 hypothetical protein; hypothetical protein 1739312 4360241 RPE_1546 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780476.1 1738050 R 316055 CDS YP_780477.1 115523566 4360242 1739776..1742874 1 NC_008435.1 KEGG: pfl:PFL_3578 sensory box sensor histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 1742874 4360242 RPE_1547 Rhodopseudomonas palustris BisA53 PAS/PAC sensor hybrid histidine kinase YP_780477.1 1739776 D 316055 CDS YP_780478.1 115523567 4360243 complement(1743033..1743620) 1 NC_008435.1 KEGG: nha:Nham_1689 hypothetical protein; hypothetical protein 1743620 4360243 RPE_1548 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780478.1 1743033 R 316055 CDS YP_780479.1 115523568 4360244 complement(1743925..1744689) 1 NC_008435.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1744689 fliP 4360244 fliP Rhodopseudomonas palustris BisA53 flagellar biosynthesis protein FliP YP_780479.1 1743925 R 316055 CDS YP_780480.1 115523569 4360245 complement(1744686..1745801) 1 NC_008435.1 KEGG: rpc:RPC_1516 hypothetical protein; hypothetical protein 1745801 4360245 RPE_1550 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780480.1 1744686 R 316055 CDS YP_780481.1 115523570 4360246 1746212..1746622 1 NC_008435.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgB 1746622 flgB 4360246 flgB Rhodopseudomonas palustris BisA53 flagellar basal body rod protein FlgB YP_780481.1 1746212 D 316055 CDS YP_780482.1 115523571 4360247 1746649..1747074 1 NC_008435.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1747074 flgC 4360247 flgC Rhodopseudomonas palustris BisA53 flagellar basal body rod protein FlgC YP_780482.1 1746649 D 316055 CDS YP_780483.1 115523572 4360248 1747088..1747417 1 NC_008435.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagella; flagellar hook-basal body protein FliE 1747417 fliE 4360248 fliE Rhodopseudomonas palustris BisA53 flagellar hook-basal body protein FliE YP_780483.1 1747088 D 316055 CDS YP_780484.1 115523573 4360249 1747551..1747814 1 NC_008435.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 1747814 fliQ 4360249 fliQ Rhodopseudomonas palustris BisA53 flagellar biosynthesis protein FliQ YP_780484.1 1747551 D 316055 CDS YP_780485.1 115523574 4360250 1747903..1748673 1 NC_008435.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1748673 fliR 4360250 fliR Rhodopseudomonas palustris BisA53 flagellar biosynthesis protein FliR YP_780485.1 1747903 D 316055 CDS YP_780486.1 115523575 4360251 1748683..1749753 1 NC_008435.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1749753 flhB 4360251 flhB Rhodopseudomonas palustris BisA53 flagellar biosynthesis protein FlhB YP_780486.1 1748683 D 316055 CDS YP_780487.1 115523576 4358451 1749868..1752492 1 NC_008435.1 KEGG: rpc:RPC_1524 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 1752492 4358451 RPE_1557 Rhodopseudomonas palustris BisA53 multi-sensor hybrid histidine kinase YP_780487.1 1749868 D 316055 CDS YP_780488.1 115523577 4358452 1752574..1753368 1 NC_008435.1 KEGG: sas:SAS0037 hypothetical protein; hypothetical protein 1753368 4358452 RPE_1558 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780488.1 1752574 D 316055 CDS YP_780489.1 115523578 4358453 1753365..1753748 1 NC_008435.1 KEGG: ret:RHE_PF00117 hypothetical protein; hypothetical protein 1753748 4358453 RPE_1559 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780489.1 1753365 D 316055 CDS YP_780490.1 115523579 4358454 1753894..1754883 1 NC_008435.1 PFAM: import inner membrane translocase, subunit Tim44; KEGG: rpc:RPC_1526 import inner membrane translocase, subunit Tim44; import inner membrane translocase subunit Tim44 1754883 4358454 RPE_1560 Rhodopseudomonas palustris BisA53 import inner membrane translocase subunit Tim44 YP_780490.1 1753894 D 316055 CDS YP_780491.1 115523580 4358455 1755047..1755748 1 NC_008435.1 KEGG: rpd:RPD_1702 hypothetical protein; hypothetical protein 1755748 4358455 RPE_1561 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780491.1 1755047 D 316055 CDS YP_780492.1 115523581 4358456 1755983..1756690 1 NC_008435.1 PFAM: Glutathione S-transferase, C-terminal domain; KEGG: rpc:RPC_1528 glutathione S-transferase-like; glutathione S-transferase 1756690 4358456 RPE_1562 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_780492.1 1755983 D 316055 CDS YP_780493.1 115523582 4358457 complement(1756878..1757552) 1 NC_008435.1 PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: bja:blr5799 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 1757552 4358457 RPE_1563 Rhodopseudomonas palustris BisA53 isoprenylcysteine carboxyl methyltransferase YP_780493.1 1756878 R 316055 CDS YP_780494.1 115523583 4358458 complement(1757668..1757889) 1 NC_008435.1 KEGG: rpc:RPC_1529 formin; formin 1757889 4358458 RPE_1564 Rhodopseudomonas palustris BisA53 formin YP_780494.1 1757668 R 316055 CDS YP_780495.1 115523584 4358459 complement(1758131..1758595) 1 NC_008435.1 KEGG: rpb:RPB_3766 hypothetical protein; hypothetical protein 1758595 4358459 RPE_1565 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780495.1 1758131 R 316055 CDS YP_780496.1 115523585 4358460 complement(1759303..1760334) 1 NC_008435.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: nha:Nham_3955 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 1760334 4358460 RPE_1566 Rhodopseudomonas palustris BisA53 transposase IS116/IS110/IS902 family protein YP_780496.1 1759303 R 316055 CDS YP_780497.1 115523586 4358462 1761505..1761735 1 NC_008435.1 KEGG: rpa:RPA3877 hypothetical protein; hypothetical protein 1761735 4358462 RPE_1568 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780497.1 1761505 D 316055 CDS YP_780498.1 115523587 4358463 1761937..1762158 1 NC_008435.1 KEGG: rpd:RPD_1706 hypothetical protein; hypothetical protein 1762158 4358463 RPE_1569 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780498.1 1761937 D 316055 CDS YP_780499.1 115523588 4358464 1762167..1762463 1 NC_008435.1 PFAM: plasmid stabilization system; KEGG: rpc:RPC_1531 plasmid stabilization system; plasmid stabilization system protein 1762463 4358464 RPE_1570 Rhodopseudomonas palustris BisA53 plasmid stabilization system protein YP_780499.1 1762167 D 316055 CDS YP_780500.1 115523589 4358465 1762575..1764230 1 NC_008435.1 TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: rpa:RPA3876 fumarate hydratase, class I; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta 1764230 4358465 RPE_1571 Rhodopseudomonas palustris BisA53 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta YP_780500.1 1762575 D 316055 CDS YP_780501.1 115523590 4358466 1764396..1765079 1 NC_008435.1 KEGG: rpd:RPD_1709 hypothetical protein; hypothetical protein 1765079 4358466 RPE_1572 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780501.1 1764396 D 316055 CDS YP_780502.1 115523591 4358467 complement(1765181..1765477) 1 NC_008435.1 KEGG: rpb:RPB_3761 hypothetical protein; hypothetical protein 1765477 4358467 RPE_1573 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780502.1 1765181 R 316055 CDS YP_780503.1 115523592 4358468 1765760..1766479 1 NC_008435.1 KEGG: rpc:RPC_1535 hypothetical protein; hypothetical protein 1766479 4358468 RPE_1574 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780503.1 1765760 D 316055 CDS YP_780504.1 115523593 4357945 complement(1766442..1767023) 1 NC_008435.1 KEGG: rpa:RPA3873 hypothetical protein; hypothetical protein 1767023 4357945 RPE_1575 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780504.1 1766442 R 316055 CDS YP_780505.1 115523594 4357946 complement(1767142..1768545) 1 NC_008435.1 PFAM: Carotenoid oxygenase; KEGG: rpc:RPC_1536 carotenoid oxygenase; carotenoid oxygenase 1768545 4357946 RPE_1576 Rhodopseudomonas palustris BisA53 carotenoid oxygenase YP_780505.1 1767142 R 316055 CDS YP_780506.1 115523595 4357947 1768666..1769373 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_1537 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 1769373 4357947 RPE_1577 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_780506.1 1768666 D 316055 CDS YP_780507.1 115523596 4357948 1769561..1770214 1 NC_008435.1 PFAM: nuclear protein SET; KEGG: rpc:RPC_1538 nuclear protein SET; nuclear protein SET 1770214 4357948 RPE_1578 Rhodopseudomonas palustris BisA53 nuclear protein SET YP_780507.1 1769561 D 316055 CDS YP_780508.1 115523597 4357949 complement(1770211..1770609) 1 NC_008435.1 KEGG: rpd:RPD_1715 hypothetical protein; hypothetical protein 1770609 4357949 RPE_1579 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780508.1 1770211 R 316055 CDS YP_780509.1 115523598 4357950 1770720..1771553 1 NC_008435.1 PFAM: helix-turn-helix domain protein; KEGG: rpb:RPB_3757 transcriptional regulator, XRE family; XRE family transcriptional regulator 1771553 4357950 RPE_1580 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_780509.1 1770720 D 316055 CDS YP_780510.1 115523599 4357951 1771633..1772307 1 NC_008435.1 PFAM: DSBA oxidoreductase; KEGG: rpc:RPC_1542 DsbA oxidoreductase; DSBA oxidoreductase 1772307 4357951 RPE_1581 Rhodopseudomonas palustris BisA53 DSBA oxidoreductase YP_780510.1 1771633 D 316055 CDS YP_780511.1 115523600 4357952 complement(1772326..1773396) 1 NC_008435.1 KEGG: rpa:RPA3867 hypothetical protein; hypothetical protein 1773396 4357952 RPE_1582 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780511.1 1772326 R 316055 CDS YP_780512.1 115523601 4357953 1773695..1775134 1 NC_008435.1 PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rpb:RPB_3754 peptidase C14, caspase catalytic subunit P20; peptidase C14, caspase catalytic subunit p20 1775134 4357953 RPE_1583 Rhodopseudomonas palustris BisA53 peptidase C14, caspase catalytic subunit p20 YP_780512.1 1773695 D 316055 CDS YP_780513.1 115523602 4357954 1775439..1775771 1 NC_008435.1 KEGG: rpc:RPC_1543 hypothetical protein; hypothetical protein 1775771 4357954 RPE_1584 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780513.1 1775439 D 316055 CDS YP_780514.1 115523603 4357955 complement(1775826..1776032) 1 NC_008435.1 KEGG: rpc:RPC_1545 hypothetical protein; hypothetical protein 1776032 4357955 RPE_1585 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780514.1 1775826 R 316055 CDS YP_780515.1 115523604 4357956 complement(1776213..1776389) 1 NC_008435.1 KEGG: rpc:RPC_1546 hypothetical protein; hypothetical protein 1776389 4357956 RPE_1586 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780515.1 1776213 R 316055 CDS YP_780516.1 115523605 4357957 complement(1776615..1776965) 1 NC_008435.1 KEGG: rpc:RPC_1548 hypothetical protein; hypothetical protein 1776965 4357957 RPE_1587 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780516.1 1776615 R 316055 CDS YP_780517.1 115523606 4357958 complement(1777168..1777434) 1 NC_008435.1 KEGG: rpc:RPC_1550 hypothetical protein; hypothetical protein 1777434 4357958 RPE_1588 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780517.1 1777168 R 316055 CDS YP_780518.1 115523607 4357959 1777596..1777784 1 NC_008435.1 KEGG: rpc:RPC_1551 hypothetical protein; hypothetical protein 1777784 4357959 RPE_1589 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780518.1 1777596 D 316055 CDS YP_780519.1 115523608 4357960 1777896..1778078 1 NC_008435.1 KEGG: rpb:RPB_3744 hypothetical protein; hypothetical protein 1778078 4357960 RPE_1590 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780519.1 1777896 D 316055 CDS YP_780520.1 115523609 4357961 complement(1779130..1779489) 1 NC_008435.1 hypothetical protein 1779489 4357961 RPE_1591 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780520.1 1779130 R 316055 CDS YP_780521.1 115523610 4358879 complement(1779635..1779874) 1 NC_008435.1 PFAM: type IV pilus assembly PilZ; KEGG: rpa:RPA1825 hypothetical protein; type IV pilus assembly PilZ 1779874 4358879 RPE_1592 Rhodopseudomonas palustris BisA53 type IV pilus assembly PilZ YP_780521.1 1779635 R 316055 CDS YP_780522.1 115523611 4358880 1780933..1782150 1 NC_008435.1 KEGG: lxx:Lxx24252 hypothetical protein; hypothetical protein 1782150 4358880 RPE_1593 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780522.1 1780933 D 316055 CDS YP_780523.1 115523612 4358881 1782617..1783705 1 NC_008435.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1783705 recA 4358881 recA Rhodopseudomonas palustris BisA53 recombinase A YP_780523.1 1782617 D 316055 CDS YP_780524.1 115523613 4358882 complement(1784014..1786899) 1 NC_008435.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 1786899 4358882 RPE_1595 Rhodopseudomonas palustris BisA53 glycine dehydrogenase YP_780524.1 1784014 R 316055 CDS YP_780525.1 115523614 4358883 complement(1787176..1787541) 1 NC_008435.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 1787541 4358883 RPE_1596 Rhodopseudomonas palustris BisA53 glycine cleavage system protein H YP_780525.1 1787176 R 316055 CDS YP_780526.1 115523615 4358884 complement(1787551..1788702) 1 NC_008435.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1788702 gcvT 4358884 gcvT Rhodopseudomonas palustris BisA53 glycine cleavage system aminomethyltransferase T YP_780526.1 1787551 R 316055 CDS YP_780527.1 115523616 4358885 1789126..1791807 1 NC_008435.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1791807 alaS 4358885 alaS Rhodopseudomonas palustris BisA53 alanyl-tRNA synthetase YP_780527.1 1789126 D 316055 CDS YP_780528.1 115523617 4358886 complement(1792148..1794214) 1 NC_008435.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: rpc:RPC_1575 peptidase S9, prolyl oligopeptidase active site region; prolyl oligopeptidase 1794214 4358886 RPE_1599 Rhodopseudomonas palustris BisA53 prolyl oligopeptidase YP_780528.1 1792148 R 316055 CDS YP_780529.1 115523618 4358887 complement(1794304..1796079) 1 NC_008435.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: rpb:RPB_3734 sodium/hydrogen exchanger; sodium/hydrogen exchanger 1796079 4358887 RPE_1600 Rhodopseudomonas palustris BisA53 sodium/hydrogen exchanger YP_780529.1 1794304 R 316055 CDS YP_780530.1 115523619 4358888 1796268..1797989 1 NC_008435.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: rpc:RPC_1573 potassium efflux system protein; potassium efflux system protein 1797989 4358888 RPE_1601 Rhodopseudomonas palustris BisA53 potassium efflux system protein YP_780530.1 1796268 D 316055 CDS YP_780531.1 115523620 4358889 complement(1798198..1799427) 1 NC_008435.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1799427 4358889 RPE_1602 Rhodopseudomonas palustris BisA53 isocitrate dehydrogenase YP_780531.1 1798198 R 316055 CDS YP_780532.1 115523621 4358890 1799676..1800869 1 NC_008435.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); protein of unknown function DUF559; KEGG: rpc:RPC_1577 RNA methyltransferase TrmH, group 1; RNA methyltransferase 1800869 4358890 RPE_1603 Rhodopseudomonas palustris BisA53 RNA methyltransferase YP_780532.1 1799676 D 316055 CDS YP_780533.1 115523622 4358891 1800948..1801220 1 NC_008435.1 KEGG: rru:Rru_A3537 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain; CopG/Arc/MetJ family transcriptional regulator 1801220 4358891 RPE_1604 Rhodopseudomonas palustris BisA53 CopG/Arc/MetJ family transcriptional regulator YP_780533.1 1800948 D 316055 CDS YP_780534.1 115523623 4358892 1802435..1802917 1 NC_008435.1 activates RNA polymerase to cleave back-tracked RNA during elongational pausing; transcription elongation factor regulatory protein 1802917 4358892 RPE_1605 Rhodopseudomonas palustris BisA53 transcription elongation factor regulatory protein YP_780534.1 1802435 D 316055 CDS YP_780535.1 115523624 4358893 complement(1803134..1803457) 1 NC_008435.1 PFAM: protein of unknown function DUF1476; KEGG: rpc:RPC_1583 protein of unknown function DUF1476; hypothetical protein 1803457 4358893 RPE_1606 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780535.1 1803134 R 316055 CDS YP_780536.1 115523625 4358894 1803730..1804527 1 NC_008435.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1804527 4358894 RPE_1607 Rhodopseudomonas palustris BisA53 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_780536.1 1803730 D 316055 CDS YP_780537.1 115523626 4358895 1804692..1804934 1 NC_008435.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 1804934 4358895 RPE_1608 Rhodopseudomonas palustris BisA53 phosphoribosylformylglycinamidine synthase subunit PurS YP_780537.1 1804692 D 316055 CDS YP_780538.1 115523627 4358896 1804955..1805209 1 NC_008435.1 KEGG: rpb:RPB_3717 hypothetical protein; hypothetical protein 1805209 4358896 RPE_1609 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780538.1 1804955 D 316055 CDS YP_780539.1 115523628 4360082 1805206..1805907 1 NC_008435.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1805907 4360082 RPE_1610 Rhodopseudomonas palustris BisA53 phosphoribosylformylglycinamidine synthase I YP_780539.1 1805206 D 316055 CDS YP_780540.1 115523629 4360083 1806043..1806246 1 NC_008435.1 hypothetical protein 1806246 4360083 RPE_1611 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780540.1 1806043 D 316055 CDS YP_780541.1 115523630 4360084 complement(1806458..1806946) 1 NC_008435.1 PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_1590 thioesterase superfamily; thioesterase superfamily protein 1806946 4360084 RPE_1612 Rhodopseudomonas palustris BisA53 thioesterase superfamily protein YP_780541.1 1806458 R 316055 CDS YP_780542.1 115523631 4360085 1807138..1809351 1 NC_008435.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1809351 4360085 RPE_1613 Rhodopseudomonas palustris BisA53 phosphoribosylformylglycinamidine synthase II YP_780542.1 1807138 D 316055 CDS YP_780543.1 115523632 4360086 complement(1809761..1810960) 1 NC_008435.1 PFAM: acyltransferase 3; KEGG: rpc:RPC_1592 acyltransferase 3; acyltransferase 3 1810960 4360086 RPE_1614 Rhodopseudomonas palustris BisA53 acyltransferase 3 YP_780543.1 1809761 R 316055 CDS YP_780544.1 115523633 4360087 complement(1811047..1811412) 1 NC_008435.1 PFAM: protein of unknown function DUF427; KEGG: bja:blr5716 hypothetical protein; hypothetical protein 1811412 4360087 RPE_1615 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780544.1 1811047 R 316055 CDS YP_780545.1 115523634 4360088 1811581..1811817 1 NC_008435.1 PFAM: BolA family protein; KEGG: rpc:RPC_1594 BolA-like protein; morphology/transcription regulator BolA family protein 1811817 4360088 RPE_1616 Rhodopseudomonas palustris BisA53 morphology/transcription regulator BolA family protein YP_780545.1 1811581 D 316055 CDS YP_780546.1 115523635 4360089 1811853..1813031 1 NC_008435.1 PFAM: low temperature requirement A; KEGG: rpc:RPC_1595 low temperature requirement A; low temperature requirement A 1813031 4360089 RPE_1617 Rhodopseudomonas palustris BisA53 low temperature requirement A YP_780546.1 1811853 D 316055 CDS YP_780547.1 115523636 4360090 complement(1813145..1814113) 1 NC_008435.1 KEGG: rpc:RPC_1597 hypothetical protein; hypothetical protein 1814113 4360090 RPE_1618 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780547.1 1813145 R 316055 CDS YP_780548.1 115523637 4360091 complement(1814156..1815403) 1 NC_008435.1 PFAM: protein of unknown function DUF323; KEGG: rpc:RPC_1598 protein of unknown function DUF323; hypothetical protein 1815403 4360091 RPE_1619 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780548.1 1814156 R 316055 CDS YP_780549.1 115523638 4360092 1815654..1815986 1 NC_008435.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: rpd:RPD_1760 glutaredoxin-related protein; glutaredoxin-like protein 1815986 4360092 RPE_1620 Rhodopseudomonas palustris BisA53 glutaredoxin-like protein YP_780549.1 1815654 D 316055 CDS YP_780550.1 115523639 4360093 1816168..1816728 1 NC_008435.1 PFAM: Appr-1-p processing domain protein; KEGG: rpc:RPC_1600 Appr-1-p processing; appr-1-p processing domain-containing protein 1816728 4360093 RPE_1621 Rhodopseudomonas palustris BisA53 appr-1-p processing domain-containing protein YP_780550.1 1816168 D 316055 CDS YP_780551.1 115523640 4360094 1816774..1818042 1 NC_008435.1 PFAM: beta-lactamase; KEGG: rpc:RPC_1601 beta-lactamase; beta-lactamase 1818042 4360094 RPE_1622 Rhodopseudomonas palustris BisA53 beta-lactamase YP_780551.1 1816774 D 316055 CDS YP_780552.1 115523641 4360095 1818218..1819048 1 NC_008435.1 KEGG: lxx:Lxx01200 hypothetical protein; hypothetical protein 1819048 4360095 RPE_1623 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780552.1 1818218 D 316055 CDS YP_780553.1 115523642 4360096 1819462..1820511 1 NC_008435.1 PFAM: fatty acid desaturase; KEGG: rpa:RPA1603 putative fatty acid desaturase; fatty acid desaturase 1820511 4360096 RPE_1624 Rhodopseudomonas palustris BisA53 fatty acid desaturase YP_780553.1 1819462 D 316055 CDS YP_780554.1 115523643 4360097 complement(1820557..1820937) 1 NC_008435.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hch:HCH_03828 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 1820937 4360097 RPE_1625 Rhodopseudomonas palustris BisA53 glyoxalase/bleomycin resistance protein/dioxygenase YP_780554.1 1820557 R 316055 CDS YP_780555.1 115523644 4360098 complement(1821321..1821524) 1 NC_008435.1 KEGG: rpd:RPD_0266 hypothetical protein; hypothetical protein 1821524 4360098 RPE_1626 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780555.1 1821321 R 316055 CDS YP_780556.1 115523645 4358950 1821835..1822497 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rpc:RPC_2348 putative signal transduction histidine kinase; putative signal transduction histidine kinase 1822497 4358950 RPE_1627 Rhodopseudomonas palustris BisA53 putative signal transduction histidine kinase YP_780556.1 1821835 D 316055 CDS YP_780557.1 115523646 4358951 1822556..1822801 1 NC_008435.1 hypothetical protein 1822801 4358951 RPE_1628 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780557.1 1822556 D 316055 CDS YP_780558.1 115523647 4358952 1823002..1823274 1 NC_008435.1 hypothetical protein 1823274 4358952 RPE_1629 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780558.1 1823002 D 316055 CDS YP_780559.1 115523648 4358953 complement(1823451..1824518) 1 NC_008435.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bja:blr5707 putative threonine aldolase; aromatic amino acid beta-eliminating lyase/threonine aldolase 1824518 4358953 RPE_1630 Rhodopseudomonas palustris BisA53 aromatic amino acid beta-eliminating lyase/threonine aldolase YP_780559.1 1823451 R 316055 CDS YP_780560.1 115523649 4358954 complement(1824616..1825284) 1 NC_008435.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1825284 rpsD 4358954 rpsD Rhodopseudomonas palustris BisA53 30S ribosomal protein S4 YP_780560.1 1824616 R 316055 CDS YP_780561.1 115523650 4358955 complement(1825671..1826285) 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_4384 hypothetical protein; N-acetyltransferase GCN5 1826285 4358955 RPE_1632 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_780561.1 1825671 R 316055 CDS YP_780562.1 115523651 4358956 complement(1826684..1827475) 1 NC_008435.1 KEGG: rpc:RPC_1604 hypothetical protein; hypothetical protein 1827475 4358956 RPE_1633 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780562.1 1826684 R 316055 CDS YP_780563.1 115523652 4358957 complement(1827513..1827893) 1 NC_008435.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: rpc:RPC_1605 cupin 2, conserved barrel; cupin 2 domain-containing protein 1827893 4358957 RPE_1634 Rhodopseudomonas palustris BisA53 cupin 2 domain-containing protein YP_780563.1 1827513 R 316055 CDS YP_780564.1 115523653 4358958 complement(1827919..1828755) 1 NC_008435.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1828755 4358958 RPE_1635 Rhodopseudomonas palustris BisA53 glutamate racemase YP_780564.1 1827919 R 316055 CDS YP_780565.1 115523654 4358959 1828905..1829456 1 NC_008435.1 PFAM: cytochrome B561; KEGG: bja:bll5701 putative cytochrome b561; cytochrome B561 1829456 4358959 RPE_1636 Rhodopseudomonas palustris BisA53 cytochrome B561 YP_780565.1 1828905 D 316055 CDS YP_780566.1 115523655 4358960 complement(1829453..1830076) 1 NC_008435.1 PFAM: MOSC domain containing protein; KEGG: rpc:RPC_1607 MOSC; MOSC domain-containing protein 1830076 4358960 RPE_1637 Rhodopseudomonas palustris BisA53 MOSC domain-containing protein YP_780566.1 1829453 R 316055 CDS YP_780567.1 115523656 4358961 complement(1830091..1830618) 1 NC_008435.1 KEGG: rpa:RPA3582 hypothetical protein; hypothetical protein 1830618 4358961 RPE_1638 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780567.1 1830091 R 316055 CDS YP_780568.1 115523657 4358962 complement(1830603..1830923) 1 NC_008435.1 KEGG: rpc:RPC_1609 hypothetical protein; hypothetical protein 1830923 4358962 RPE_1639 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780568.1 1830603 R 316055 CDS YP_780569.1 115523658 4358963 complement(1831155..1832462) 1 NC_008435.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1832462 4358963 RPE_1640 Rhodopseudomonas palustris BisA53 adenylosuccinate lyase YP_780569.1 1831155 R 316055 CDS YP_780570.1 115523659 4358964 1833862..1834431 1 NC_008435.1 hypothetical protein 1834431 4358964 RPE_1641 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780570.1 1833862 D 316055 CDS YP_780571.1 115523660 4358965 complement(1835939..1836634) 1 NC_008435.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: rpd:RPD_1771 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 1836634 4358965 RPE_1642 Rhodopseudomonas palustris BisA53 ribulose-phosphate 3-epimerase YP_780571.1 1835939 R 316055 CDS YP_780572.1 115523661 4358966 1836871..1837449 1 NC_008435.1 PFAM: Calcium-binding EF-hand-containing protein; KEGG: rpc:RPC_1615 calcium-binding EF-hand; signal transduction protein 1837449 4358966 RPE_1643 Rhodopseudomonas palustris BisA53 signal transduction protein YP_780572.1 1836871 D 316055 CDS YP_780573.1 115523662 4358967 complement(1837626..1838627) 1 NC_008435.1 PFAM: peptidase S58, DmpA; KEGG: nha:Nham_2617 peptidase S58, DmpA; peptidase S58, DmpA 1838627 4358967 RPE_1644 Rhodopseudomonas palustris BisA53 peptidase S58, DmpA YP_780573.1 1837626 R 316055 CDS YP_780574.1 115523663 4359053 1838741..1839475 1 NC_008435.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: rpc:RPC_1617 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein, transmembrane region 1839475 4359053 RPE_1645 Rhodopseudomonas palustris BisA53 cytochrome c biogenesis protein, transmembrane region YP_780574.1 1838741 D 316055 CDS YP_780575.1 115523664 4359054 1839593..1839880 1 NC_008435.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpa:RPA3811 excinuclease ABC, C subunit, N-terminal; excinuclease ABC subunit C 1839880 4359054 RPE_1646 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_780575.1 1839593 D 316055 CDS YP_780576.1 115523665 4359055 complement(1840141..1841262) 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_1618 extracellular ligand-binding receptor; extracellular ligand-binding receptor 1841262 4359055 RPE_1647 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_780576.1 1840141 R 316055 CDS YP_780577.1 115523666 4359056 complement(1841564..1842319) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1619 ABC transporter related; ABC transporter-like protein 1842319 4359056 RPE_1648 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780577.1 1841564 R 316055 CDS YP_780578.1 115523667 4359057 complement(1842447..1843286) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1620 ABC transporter related; ABC transporter-like protein 1843286 4359057 RPE_1649 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780578.1 1842447 R 316055 CDS YP_780579.1 115523668 4359058 complement(1843283..1844617) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpc:RPC_1621 inner-membrane translocator; inner-membrane translocator 1844617 4359058 RPE_1650 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_780579.1 1843283 R 316055 CDS YP_780580.1 115523669 4359059 complement(1844626..1845543) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_1779 inner-membrane translocator; inner-membrane translocator 1845543 4359059 RPE_1651 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_780580.1 1844626 R 316055 CDS YP_780581.1 115523670 4359060 1846212..1846766 1 NC_008435.1 KEGG: rpc:RPC_1623 hypothetical protein; hypothetical protein 1846766 4359060 RPE_1652 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780581.1 1846212 D 316055 CDS YP_780582.1 115523671 4359061 complement(1847074..1847856) 1 NC_008435.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_1629 3-oxoadipate enol-lactonase; 3-oxoadipate enol-lactonase 1847856 4359061 RPE_1653 Rhodopseudomonas palustris BisA53 3-oxoadipate enol-lactonase YP_780582.1 1847074 R 316055 CDS YP_780583.1 115523672 4359062 1848127..1848582 1 NC_008435.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rpa:RPA3804 hypothetical protein; carbon monoxide dehydrogenase subunit G 1848582 4359062 RPE_1654 Rhodopseudomonas palustris BisA53 carbon monoxide dehydrogenase subunit G YP_780583.1 1848127 D 316055 CDS YP_780584.1 115523673 4359063 1848942..1849427 1 NC_008435.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rpc:RPC_1631 (2Fe-2S)-binding; 2Fe-2S iron-sulfur cluster binding domain-containing protein 1849427 4359063 RPE_1655 Rhodopseudomonas palustris BisA53 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_780584.1 1848942 D 316055 CDS YP_780585.1 115523674 4359064 1849477..1850319 1 NC_008435.1 PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rpc:RPC_1632 molybdopterin dehydrogenase, FAD-binding; molybdopterin dehydrogenase protein 1850319 4359064 RPE_1656 Rhodopseudomonas palustris BisA53 molybdopterin dehydrogenase protein YP_780585.1 1849477 D 316055 CDS YP_780586.1 115523675 4359065 1850330..1851238 1 NC_008435.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_1633 ATPase associated with various cellular activities, AAA_5; ATPase 1851238 4359065 RPE_1657 Rhodopseudomonas palustris BisA53 ATPase YP_780586.1 1850330 D 316055 CDS YP_780587.1 115523676 4359066 1852029..1853228 1 NC_008435.1 PFAM: VWA containing CoxE family protein; KEGG: rpc:RPC_1634 VWA containing CoxE-like; VWA domain CoxE-like family protein 1853228 4359066 RPE_1658 Rhodopseudomonas palustris BisA53 VWA domain CoxE-like family protein YP_780587.1 1852029 D 316055 CDS YP_780588.1 115523677 4359067 1853265..1853597 1 NC_008435.1 PFAM: protein of unknown function DUF182; KEGG: rpa:RPA3799 DUF182; hypothetical protein 1853597 4359067 RPE_1659 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780588.1 1853265 D 316055 CDS YP_780589.1 115523678 4359068 1853600..1854301 1 NC_008435.1 KEGG: rpa:RPA3798 xanthine dehydrogenase accessory factor; xanthine dehydrogenase accessory factor 1854301 4359068 RPE_1660 Rhodopseudomonas palustris BisA53 xanthine dehydrogenase accessory factor YP_780589.1 1853600 D 316055 CDS YP_780590.1 115523679 4359069 1854298..1855902 1 NC_008435.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; molybdopterin binding domain; KEGG: rpc:RPC_1637 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1855902 4359069 RPE_1661 Rhodopseudomonas palustris BisA53 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_780590.1 1854298 D 316055 CDS YP_780591.1 115523680 4359070 complement(1855897..1856769) 1 NC_008435.1 TIGRFAM: methyltransferase FkbM family; KEGG: ret:RHE_PE00048 hypothetical protein; FkbM family methyltransferase 1856769 4359070 RPE_1662 Rhodopseudomonas palustris BisA53 FkbM family methyltransferase YP_780591.1 1855897 R 316055 CDS YP_780592.1 115523681 4359071 1856907..1857299 1 NC_008435.1 KEGG: rpc:RPC_1639 hypothetical protein; hypothetical protein 1857299 4359071 RPE_1663 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780592.1 1856907 D 316055 CDS YP_780593.1 115523682 4359072 complement(1857334..1857513) 1 NC_008435.1 KEGG: rpc:RPC_1641 hypothetical protein; hypothetical protein 1857513 4359072 RPE_1664 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780593.1 1857334 R 316055 CDS YP_780594.1 115523683 4359073 1857688..1858464 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpa:RPA3791 probable transcriptional regulator, TetR family; TetR family transcriptional regulator 1858464 4359073 RPE_1665 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_780594.1 1857688 D 316055 CDS YP_780595.1 115523684 4359074 1858461..1859252 1 NC_008435.1 KEGG: rpb:RPB_3668 putative efflux protein; putative efflux protein 1859252 4359074 RPE_1666 Rhodopseudomonas palustris BisA53 putative efflux protein YP_780595.1 1858461 D 316055 CDS YP_780596.1 115523685 4359075 1859249..1860184 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA3789 putative ATP-binding component of a transport system; ABC transporter-like protein 1860184 4359075 RPE_1667 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780596.1 1859249 D 316055 CDS YP_780597.1 115523686 4359076 1860181..1861347 1 NC_008435.1 PFAM: ABC-2 type transporter; KEGG: rpd:RPD_1794 ABC-2; ABC-2 type transporter 1861347 4359076 RPE_1668 Rhodopseudomonas palustris BisA53 ABC-2 type transporter YP_780597.1 1860181 D 316055 CDS YP_780598.1 115523687 4359077 1861591..1862208 1 NC_008435.1 KEGG: rpb:RPB_3664 hypothetical protein; hypothetical protein 1862208 4359077 RPE_1669 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780598.1 1861591 D 316055 CDS YP_780599.1 115523688 4359078 complement(1862306..1863043) 1 NC_008435.1 KEGG: rpc:RPC_1642 hypothetical protein; hypothetical protein 1863043 4359078 RPE_1670 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780599.1 1862306 R 316055 CDS YP_780600.1 115523689 4359079 complement(1863126..1863368) 1 NC_008435.1 KEGG: rpd:RPD_1797 hypothetical protein; hypothetical protein 1863368 4359079 RPE_1671 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780600.1 1863126 R 316055 CDS YP_780601.1 115523690 4359080 complement(1863471..1863932) 1 NC_008435.1 PFAM: protein of unknown function DUF1130; KEGG: rpc:RPC_1643 protein of unknown function DUF1130; hypothetical protein 1863932 4359080 RPE_1672 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780601.1 1863471 R 316055 CDS YP_780602.1 115523691 4359081 complement(1863968..1864771) 1 NC_008435.1 PFAM: protein of unknown function DUF72; KEGG: rpc:RPC_1644 protein of unknown function DUF72; hypothetical protein 1864771 4359081 RPE_1673 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780602.1 1863968 R 316055 CDS YP_780603.1 115523692 4359082 1865025..1866158 1 NC_008435.1 PFAM: glycosyl transferase, family 2; GtrA family protein; KEGG: rpc:RPC_1645 dolichyl-phosphate beta-D-mannosyltransferase; dolichyl-phosphate beta-D-mannosyltransferase 1866158 4359082 RPE_1674 Rhodopseudomonas palustris BisA53 dolichyl-phosphate beta-D-mannosyltransferase YP_780603.1 1865025 D 316055 CDS YP_780604.1 115523693 4359083 1866155..1867645 1 NC_008435.1 PFAM: glycosyl transferase, family 39; KEGG: rpc:RPC_1646 glycosyl transferase, family 39; glycosyl transferase family protein 1867645 4359083 RPE_1675 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_780604.1 1866155 D 316055 CDS YP_780605.1 115523694 4359084 1867781..1868998 1 NC_008435.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_1647 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1868998 4359084 RPE_1676 Rhodopseudomonas palustris BisA53 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_780605.1 1867781 D 316055 CDS YP_780606.1 115523695 4359085 complement(1869189..1870094) 1 NC_008435.1 PFAM: PfkB domain protein; KEGG: rpb:RPB_3654 PfkB; ribokinase-like domain-containing protein 1870094 4359085 RPE_1677 Rhodopseudomonas palustris BisA53 ribokinase-like domain-containing protein YP_780606.1 1869189 R 316055 CDS YP_780607.1 115523696 4359086 1870278..1871147 1 NC_008435.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpd:RPD_1806 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1871147 4359086 RPE_1678 Rhodopseudomonas palustris BisA53 glyoxalase/bleomycin resistance protein/dioxygenase YP_780607.1 1870278 D 316055 CDS YP_780608.1 115523697 4359087 1871216..1871917 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_1649 transcriptional regulator, TetR family; TetR family transcriptional regulator 1871917 4359087 RPE_1679 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_780608.1 1871216 D 316055 CDS YP_780609.1 115523698 4359452 1871919..1873115 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_1650 secretion protein HlyD; RND family efflux transporter MFP subunit 1873115 4359452 RPE_1680 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_780609.1 1871919 D 316055 CDS YP_780610.1 115523699 4359453 1873254..1876358 1 NC_008435.1 PFAM: acriflavin resistance protein; KEGG: rpc:RPC_1651 acriflavin resistance protein; acriflavin resistance protein 1876358 4359453 RPE_1681 Rhodopseudomonas palustris BisA53 acriflavin resistance protein YP_780610.1 1873254 D 316055 CDS YP_780611.1 115523700 4359454 1876441..1877694 1 NC_008435.1 PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_1652 D-amino-acid dehydrogenase; D-amino-acid dehydrogenase 1877694 4359454 RPE_1682 Rhodopseudomonas palustris BisA53 D-amino-acid dehydrogenase YP_780611.1 1876441 D 316055 CDS YP_780612.1 115523701 4359455 1877798..1878052 1 NC_008435.1 KEGG: rpc:RPC_1653 hypothetical protein; hypothetical protein 1878052 4359455 RPE_1683 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780612.1 1877798 D 316055 CDS YP_780613.1 115523702 4359456 1878098..1878853 1 NC_008435.1 PFAM: PGAP1 family protein; KEGG: rpd:RPD_1818 hypothetical protein; hypothetical protein 1878853 4359456 RPE_1684 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780613.1 1878098 D 316055 CDS YP_780614.1 115523703 4359457 1879040..1879537 1 NC_008435.1 TIGRFAM: phasin; KEGG: rpc:RPC_1658 phasin 2; phasin 2 1879537 4359457 RPE_1685 Rhodopseudomonas palustris BisA53 phasin 2 YP_780614.1 1879040 D 316055 CDS YP_780615.1 115523704 4359458 1879576..1880025 1 NC_008435.1 hypothetical protein 1880025 4359458 RPE_1686 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780615.1 1879576 D 316055 CDS YP_780616.1 115523705 4359459 complement(1881005..1882231) 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; OsmC family protein; KEGG: rpc:RPC_1673 OsmC-like protein; OsmC-like protein 1882231 4359459 RPE_1687 Rhodopseudomonas palustris BisA53 OsmC-like protein YP_780616.1 1881005 R 316055 CDS YP_780617.1 115523706 4359460 complement(1882418..1883080) 1 NC_008435.1 PFAM: oxidoreductase, molybdopterin binding; KEGG: rpc:RPC_1672 oxidoreductase, molybdopterin binding; molybdopterin binding oxidoreductase 1883080 4359460 RPE_1688 Rhodopseudomonas palustris BisA53 molybdopterin binding oxidoreductase YP_780617.1 1882418 R 316055 CDS YP_780618.1 115523707 4359461 complement(1883198..1884121) 1 NC_008435.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rpc:RPC_1669 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 1884121 4359461 RPE_1689 Rhodopseudomonas palustris BisA53 D-isomer specific 2-hydroxyacid dehydrogenase YP_780618.1 1883198 R 316055 CDS YP_780619.1 115523708 4359462 complement(1884141..1884266) 1 NC_008435.1 KEGG: rpc:RPC_1668 amidase, hydantoinase/carbamoylase; amidase, hydantoinase/carbamoylase 1884266 4359462 RPE_1690 Rhodopseudomonas palustris BisA53 amidase, hydantoinase/carbamoylase YP_780619.1 1884141 R 316055 CDS YP_780620.1 115523709 4359463 complement(1884308..1885264) 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_1667 transcriptional regulator, LysR family; LysR family transcriptional regulator 1885264 4359463 RPE_1691 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_780620.1 1884308 R 316055 CDS YP_780621.1 115523710 4359464 1885378..1886193 1 NC_008435.1 PFAM: protein of unknown function DUF1445; KEGG: rpc:RPC_1666 protein of unknown function DUF1445; hypothetical protein 1886193 4359464 RPE_1692 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780621.1 1885378 D 316055 CDS YP_780622.1 115523711 4359465 1886242..1887486 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_1665 extracellular ligand-binding receptor; extracellular ligand-binding receptor 1887486 4359465 RPE_1693 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_780622.1 1886242 D 316055 CDS YP_780623.1 115523712 4359466 1887803..1888681 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpc:RPC_1664 inner-membrane translocator; inner-membrane translocator 1888681 4359466 RPE_1694 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_780623.1 1887803 D 316055 CDS YP_780624.1 115523713 4359467 1888681..1889661 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_1849 inner-membrane translocator; inner-membrane translocator 1889661 4359467 RPE_1695 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_780624.1 1888681 D 316055 CDS YP_780625.1 115523714 4359468 1889658..1890389 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1662 ABC transporter related; ABC transporter-like protein 1890389 4359468 RPE_1696 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780625.1 1889658 D 316055 CDS YP_780626.1 115523715 4359469 1890373..1891077 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1661 ABC transporter related; ABC transporter-like protein 1891077 4359469 RPE_1697 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780626.1 1890373 D 316055 CDS YP_780627.1 115523716 4359470 complement(1891192..1891479) 1 NC_008435.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: nha:Nham_0101 excinuclease ABC, C subunit-like; excinuclease ABC subunit C 1891479 4359470 RPE_1698 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_780627.1 1891192 R 316055 CDS YP_780628.1 115523717 4359471 1891641..1892423 1 NC_008435.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rpd:RPD_1855 hydroxypyruvate isomerase; hydroxypyruvate isomerase 1892423 4359471 RPE_1699 Rhodopseudomonas palustris BisA53 hydroxypyruvate isomerase YP_780628.1 1891641 D 316055 CDS YP_780629.1 115523718 4359472 1892555..1893673 1 NC_008435.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 1893673 4359472 RPE_1700 Rhodopseudomonas palustris BisA53 transposase IS116/IS110/IS902 family protein YP_780629.1 1892555 D 316055 CDS YP_780630.1 115523719 4359473 complement(1894004..1895512) 1 NC_008435.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1895512 4359473 RPE_1701 Rhodopseudomonas palustris BisA53 acetyl-CoA acetyltransferase YP_780630.1 1894004 R 316055 CDS YP_780631.1 115523720 4359474 complement(1895541..1896329) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpd:RPD_1861 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1896329 4359474 RPE_1702 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_780631.1 1895541 R 316055 CDS YP_780632.1 115523721 4359475 1896496..1897293 1 NC_008435.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1897293 4359475 RPE_1703 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase YP_780632.1 1896496 D 316055 CDS YP_780633.1 115523722 4359476 1897309..1898301 1 NC_008435.1 PFAM: aminoglycoside phosphotransferase; KEGG: rpd:RPD_1863 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1898301 4359476 RPE_1704 Rhodopseudomonas palustris BisA53 aminoglycoside phosphotransferase YP_780633.1 1897309 D 316055 CDS YP_780634.1 115523723 4359477 1898317..1898709 1 NC_008435.1 KEGG: rpb:RPB_3603 hypothetical protein; hypothetical protein 1898709 4359477 RPE_1705 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780634.1 1898317 D 316055 CDS YP_780635.1 115523724 4359478 complement(1898887..1899372) 1 NC_008435.1 PFAM: Redoxin domain protein; KEGG: rpc:RPC_4075 peroxiredoxin-like protein; redoxin domain-containing protein 1899372 4359478 RPE_1706 Rhodopseudomonas palustris BisA53 redoxin domain-containing protein YP_780635.1 1898887 R 316055 CDS YP_780636.1 115523725 4359479 complement(1899548..1901239) 1 NC_008435.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1901239 4359479 RPE_1707 Rhodopseudomonas palustris BisA53 long-chain-fatty-acid--CoA ligase YP_780636.1 1899548 R 316055 CDS YP_780637.1 115523726 4359480 complement(1901493..1902650) 1 NC_008435.1 PFAM: beta-lactamase; peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; KEGG: rpc:RPC_4073 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 1902650 4359480 RPE_1708 Rhodopseudomonas palustris BisA53 serine-type D-Ala-D-Ala carboxypeptidase YP_780637.1 1901493 R 316055 CDS YP_780638.1 115523727 4359481 complement(1903178..1904986) 1 NC_008435.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABc transporter 1904986 4359481 RPE_1709 Rhodopseudomonas palustris BisA53 cyclic beta-1,2-glucan ABc transporter YP_780638.1 1903178 R 316055 CDS YP_780639.1 115523728 4359482 1905328..1905720 1 NC_008435.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: rpc:RPC_4071 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 1905720 4359482 RPE_1710 Rhodopseudomonas palustris BisA53 NADH-ubiquinone/plastoquinone oxidoreductase subunit 3 YP_780639.1 1905328 D 316055 CDS YP_780640.1 115523729 4359483 1905717..1906334 1 NC_008435.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1906334 4359483 RPE_1711 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit B YP_780640.1 1905717 D 316055 CDS YP_780641.1 115523730 4359484 1906331..1908076 1 NC_008435.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1908076 4359484 RPE_1712 Rhodopseudomonas palustris BisA53 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_780641.1 1906331 D 316055 CDS YP_780642.1 115523731 4359485 1908073..1908546 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 1908546 4359485 RPE_1713 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit E YP_780642.1 1908073 D 316055 CDS YP_780643.1 115523732 4359486 1908543..1909829 1 NC_008435.1 PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rpc:RPC_4067 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1909829 4359486 RPE_1714 Rhodopseudomonas palustris BisA53 NADH dehydrogenase (quinone) YP_780643.1 1908543 D 316055 CDS YP_780644.1 115523733 4359837 1909826..1912441 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 1912441 4359837 RPE_1715 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit G YP_780644.1 1909826 D 316055 CDS YP_780645.1 115523734 4359838 1912438..1913397 1 NC_008435.1 PFAM: respiratory-chain NADH dehydrogenase, subunit 1; KEGG: rpc:RPC_4065 respiratory-chain NADH dehydrogenase, subunit 1; respiratory-chain NADH dehydrogenase subunit 1 1913397 4359838 RPE_1716 Rhodopseudomonas palustris BisA53 respiratory-chain NADH dehydrogenase subunit 1 YP_780645.1 1912438 D 316055 CDS YP_780646.1 115523735 4359839 1913394..1913915 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1913915 4359839 RPE_1717 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit I YP_780646.1 1913394 D 316055 CDS YP_780647.1 115523736 4359840 1913912..1914412 1 NC_008435.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: rpc:RPC_4063 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 1914412 4359840 RPE_1718 Rhodopseudomonas palustris BisA53 NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 YP_780647.1 1913912 D 316055 CDS YP_780648.1 115523737 4359841 1914409..1914717 1 NC_008435.1 PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: rpc:RPC_4062 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 1914717 4359841 RPE_1719 Rhodopseudomonas palustris BisA53 NADH-ubiquinone oxidoreductase subunit 4L YP_780648.1 1914409 D 316055 CDS YP_780649.1 115523738 4359842 1914714..1916681 1 NC_008435.1 KEGG: rpc:RPC_4061 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 1916681 4359842 RPE_1720 Rhodopseudomonas palustris BisA53 proton-translocating NADH-quinone oxidoreductase subunit L YP_780649.1 1914714 D 316055 CDS YP_780650.1 115523739 4359843 1916672..1918114 1 NC_008435.1 KEGG: rpc:RPC_4060 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 1918114 4359843 RPE_1721 Rhodopseudomonas palustris BisA53 proton-translocating NADH-quinone oxidoreductase subunit M YP_780650.1 1916672 D 316055 CDS YP_780651.1 115523740 4359844 1918111..1919481 1 NC_008435.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rpc:RPC_4059 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1919481 4359844 RPE_1722 Rhodopseudomonas palustris BisA53 NADH dehydrogenase (quinone) YP_780651.1 1918111 D 316055 CDS YP_780652.1 115523741 4359845 complement(1919742..1921049) 1 NC_008435.1 KEGG: rpb:RPB_1360 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase 1921049 4359845 RPE_1723 Rhodopseudomonas palustris BisA53 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_780652.1 1919742 R 316055 CDS YP_780653.1 115523742 4359846 complement(1921379..1922068) 1 NC_008435.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; transcriptional regulator FixK 1922068 fixK 4359846 fixK Rhodopseudomonas palustris BisA53 transcriptional regulator FixK YP_780653.1 1921379 R 316055 CDS YP_780654.1 115523743 4359847 complement(1922195..1922611) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_4054 response regulator receiver domain protein (CheY-like); response regulator receiver protein 1922611 4359847 RPE_1725 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_780654.1 1922195 R 316055 CDS YP_780655.1 115523744 4359848 complement(1922691..1923308) 1 NC_008435.1 response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; response regulator FixJ 1923308 fixJ 4359848 fixJ Rhodopseudomonas palustris BisA53 response regulator FixJ YP_780655.1 1922691 R 316055 CDS YP_780656.1 115523745 4359849 complement(1923298..1924833) 1 NC_008435.1 KEGG: rpc:RPC_4052 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 1924833 4359849 RPE_1727 Rhodopseudomonas palustris BisA53 PAS/PAC sensor signal transduction histidine kinase YP_780656.1 1923298 R 316055 CDS YP_780657.1 115523746 4359850 complement(1924972..1925700) 1 NC_008435.1 PFAM: CBS domain containing protein; transport-associated; KEGG: rpc:RPC_4051 putative signal-transduction protein with CBS domains; signal-transduction protein 1925700 4359850 RPE_1728 Rhodopseudomonas palustris BisA53 signal-transduction protein YP_780657.1 1924972 R 316055 CDS YP_780658.1 115523747 4359851 complement(1925822..1926655) 1 NC_008435.1 PFAM: UspA domain protein; KEGG: rpc:RPC_4050 UspA; UspA domain-containing protein 1926655 4359851 RPE_1729 Rhodopseudomonas palustris BisA53 UspA domain-containing protein YP_780658.1 1925822 R 316055 CDS YP_780659.1 115523748 4359852 1926803..1927684 1 NC_008435.1 PFAM: UspA domain protein; KEGG: rpc:RPC_4049 hypothetical protein; UspA domain-containing protein 1927684 4359852 RPE_1730 Rhodopseudomonas palustris BisA53 UspA domain-containing protein YP_780659.1 1926803 D 316055 CDS YP_780660.1 115523749 4359853 1927694..1929487 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rpc:RPC_4048 poly-beta-hydroxybutyrate polymerase-like; poly-beta-hydroxybutyrate polymerase domain-containing protein 1929487 4359853 RPE_1731 Rhodopseudomonas palustris BisA53 poly-beta-hydroxybutyrate polymerase domain-containing protein YP_780660.1 1927694 D 316055 CDS YP_780661.1 115523750 4359854 complement(1929497..1931011) 1 NC_008435.1 KEGG: rpc:RPC_4047 hypothetical protein; hypothetical protein 1931011 4359854 RPE_1732 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780661.1 1929497 R 316055 CDS YP_780662.1 115523751 4359855 1931317..1931706 1 NC_008435.1 PFAM: CBS domain containing protein; KEGG: rpc:RPC_4046 CBS domain containing membrane protein; hypothetical protein 1931706 4359855 RPE_1733 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780662.1 1931317 D 316055 CDS YP_780663.1 115523752 4359856 1931878..1934586 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: rpc:RPC_4045 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1934586 4359856 RPE_1734 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_780663.1 1931878 D 316055 CDS YP_780664.1 115523753 4359857 complement(1934962..1935531) 1 NC_008435.1 KEGG: rpc:RPC_3181 hypothetical protein; hypothetical protein 1935531 4359857 RPE_1735 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780664.1 1934962 R 316055 CDS YP_780665.1 115523754 4359858 complement(1935638..1936072) 1 NC_008435.1 KEGG: rpc:RPC_4044 hypothetical protein; hypothetical protein 1936072 4359858 RPE_1736 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780665.1 1935638 R 316055 CDS YP_780666.1 115523755 4359859 1936253..1937401 1 NC_008435.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; protein of unknown function DUF140; KEGG: rpc:RPC_4043 protein of unknown function DUF140; hypothetical protein 1937401 4359859 RPE_1737 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780666.1 1936253 D 316055 CDS YP_780667.1 115523756 4359860 1937404..1938177 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4042 ABC transporter related; ABC transporter-like protein 1938177 4359860 RPE_1738 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780667.1 1937404 D 316055 CDS YP_780668.1 115523757 4359861 1938183..1939337 1 NC_008435.1 PFAM: Mammalian cell entry related domain protein; KEGG: rpc:RPC_4041 mammalian cell entry related; hypothetical protein 1939337 4359861 RPE_1739 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780668.1 1938183 D 316055 CDS YP_780669.1 115523758 4359862 complement(1939338..1939691) 1 NC_008435.1 PFAM: cytochrome c, class I; KEGG: rpc:RPC_4040 hypothetical protein; cytochrome c, class I 1939691 4359862 RPE_1740 Rhodopseudomonas palustris BisA53 cytochrome c, class I YP_780669.1 1939338 R 316055 CDS YP_780670.1 115523759 4359863 1939859..1940578 1 NC_008435.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rpc:RPC_4039 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 1940578 4359863 RPE_1741 Rhodopseudomonas palustris BisA53 Crp/FNR family transcriptional regulator YP_780670.1 1939859 D 316055 CDS YP_780671.1 115523760 4359864 1940625..1941851 1 NC_008435.1 PFAM: cyclic nucleotide-binding; Ion transport protein; Ion transport 2 domain protein,; KEGG: rpc:RPC_4038 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein 1941851 4359864 RPE_1742 Rhodopseudomonas palustris BisA53 cyclic nucleotide-binding protein YP_780671.1 1940625 D 316055 CDS YP_780672.1 115523761 4359866 complement(1942245..1942514) 1 NC_008435.1 KEGG: rpa:RPA4230 hypothetical protein; hypothetical protein 1942514 4359866 RPE_1744 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780672.1 1942245 R 316055 CDS YP_780673.1 115523762 4359867 complement(1942929..1943312) 1 NC_008435.1 KEGG: rpc:RPC_4034 hypothetical protein; hypothetical protein 1943312 4359867 RPE_1745 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780673.1 1942929 R 316055 CDS YP_780674.1 115523763 4359868 1943407..1943646 1 NC_008435.1 KEGG: rpb:RPB_1383 hypothetical protein; hypothetical protein 1943646 4359868 RPE_1746 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780674.1 1943407 D 316055 CDS YP_780675.1 115523764 4359869 1943922..1944554 1 NC_008435.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein, P47K; KEGG: rpc:RPC_4032 urease accessory protein UreG; urease accessory protein UreG 1944554 4359869 RPE_1747 Rhodopseudomonas palustris BisA53 urease accessory protein UreG YP_780675.1 1943922 D 316055 CDS YP_780676.1 115523765 4359870 1944761..1946416 1 NC_008435.1 PFAM: HWE histidine kinase; KEGG: rpc:RPC_4031 signal transduction histidine kinase; signal transduction histidine kinase 1946416 4359870 RPE_1748 Rhodopseudomonas palustris BisA53 signal transduction histidine kinase YP_780676.1 1944761 D 316055 CDS YP_780677.1 115523766 4359871 complement(1946718..1947266) 1 NC_008435.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1947266 4359871 RPE_1749 Rhodopseudomonas palustris BisA53 RNA polymerase sigma factor YP_780677.1 1946718 R 316055 CDS YP_780678.1 115523767 4358505 complement(1947266..1947475) 1 NC_008435.1 KEGG: rpc:RPC_4029 hypothetical protein; hypothetical protein 1947475 4358505 RPE_1750 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780678.1 1947266 R 316055 CDS YP_780679.1 115523768 4358506 1947677..1948483 1 NC_008435.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 1948483 4358506 RPE_1751 Rhodopseudomonas palustris BisA53 two-component response regulator YP_780679.1 1947677 D 316055 CDS YP_780680.1 115523769 4358507 1948860..1949321 1 NC_008435.1 KEGG: rpb:RPB_1389 hypothetical protein; hypothetical protein 1949321 4358507 RPE_1752 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780680.1 1948860 D 316055 CDS YP_780681.1 115523770 4358508 complement(1950956..1952194) 1 NC_008435.1 PFAM: protein of unknown function UPF0118; KEGG: rpc:RPC_4026 protein of unknown function UPF0118; hypothetical protein 1952194 4358508 RPE_1753 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780681.1 1950956 R 316055 CDS YP_780682.1 115523771 4358509 1952282..1953061 1 NC_008435.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_4025 ErfK/YbiS/YcfS/YnhG; hypothetical protein 1953061 4358509 RPE_1754 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780682.1 1952282 D 316055 CDS YP_780683.1 115523772 4358510 1953083..1953730 1 NC_008435.1 KEGG: rpc:RPC_4024 hypothetical protein; hypothetical protein 1953730 4358510 RPE_1755 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780683.1 1953083 D 316055 CDS YP_780684.1 115523773 4358511 1953834..1953995 1 NC_008435.1 KEGG: rpa:RPA4218 hypothetical protein; hypothetical protein 1953995 4358511 RPE_1756 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780684.1 1953834 D 316055 CDS YP_780685.1 115523774 4358512 complement(1954061..1956223) 1 NC_008435.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 1956223 4358512 RPE_1757 Rhodopseudomonas palustris BisA53 malate synthase G YP_780685.1 1954061 R 316055 CDS YP_780686.1 115523775 4358513 complement(1956360..1957226) 1 NC_008435.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1396 sulfate ABC transporter, permease protein CysW; sulfate ABC transporter permease 1957226 4358513 RPE_1758 Rhodopseudomonas palustris BisA53 sulfate ABC transporter permease YP_780686.1 1956360 R 316055 CDS YP_780687.1 115523776 4358514 complement(1957226..1958053) 1 NC_008435.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_4019 sulfate ABC transporter, permease protein CysT; sulfate ABC transporter permease 1958053 4358514 RPE_1759 Rhodopseudomonas palustris BisA53 sulfate ABC transporter permease YP_780687.1 1957226 R 316055 CDS YP_780688.1 115523777 4358515 complement(1958406..1959413) 1 NC_008435.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rpd:RPD_1378 thiosulphate-binding protein; sulfate ABC transporter periplasmic sulfate-binding protein 1959413 4358515 RPE_1760 Rhodopseudomonas palustris BisA53 sulfate ABC transporter periplasmic sulfate-binding protein YP_780688.1 1958406 R 316055 CDS YP_780689.1 115523778 4358516 complement(1959442..1961355) 1 NC_008435.1 Adenylyl-sulfate kinase; PFAM: protein synthesis factor, GTP-binding; adenylylsulfate kinase; elongation factor Tu, domain 2 protein; KEGG: rpc:RPC_4017 sulfate adenylyltransferase, large subunit; sulfate adenylyltransferase 1961355 4358516 RPE_1761 Rhodopseudomonas palustris BisA53 sulfate adenylyltransferase YP_780689.1 1959442 R 316055 CDS YP_780690.1 115523779 4358517 complement(1961364..1962254) 1 NC_008435.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 1962254 4358517 RPE_1762 Rhodopseudomonas palustris BisA53 sulfate adenylyltransferase subunit 2 YP_780690.1 1961364 R 316055 CDS YP_780691.1 115523780 4358518 1962398..1963819 1 NC_008435.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpc:RPC_4015 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 1963819 4358518 RPE_1763 Rhodopseudomonas palustris BisA53 uroporphyrin-III C-methyltransferase YP_780691.1 1962398 D 316055 CDS YP_780692.1 115523781 4358519 1963816..1964130 1 NC_008435.1 KEGG: rpc:RPC_4014 hypothetical protein; hypothetical protein 1964130 4358519 RPE_1764 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780692.1 1963816 D 316055 CDS YP_780693.1 115523782 4358520 1964141..1965796 1 NC_008435.1 PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: rpc:RPC_4013 nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta subunit 1965796 4358520 RPE_1765 Rhodopseudomonas palustris BisA53 nitrite/sulfite reductase hemoprotein beta subunit YP_780693.1 1964141 D 316055 CDS YP_780694.1 115523783 4358521 1965783..1966301 1 NC_008435.1 PFAM: Uncharacterised conserved protein UCP030820; KEGG: rpc:RPC_4012 uncharacterised conserved protein UCP030820; hypothetical protein 1966301 4358521 RPE_1766 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780694.1 1965783 D 316055 CDS YP_780695.1 115523784 4358522 1966298..1967032 1 NC_008435.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 1967032 4358522 RPE_1767 Rhodopseudomonas palustris BisA53 phosphoadenosine phosphosulfate reductase YP_780695.1 1966298 D 316055 CDS YP_780696.1 115523785 4358523 1967150..1968139 1 NC_008435.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_4010 thiosulphate-binding protein; thiosulfate-binding protein 1968139 4358523 RPE_1768 Rhodopseudomonas palustris BisA53 thiosulfate-binding protein YP_780696.1 1967150 D 316055 CDS YP_780697.1 115523786 4358524 1968392..1969228 1 NC_008435.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_4009 sulfate ABC transporter, permease protein CysT; sulfate ABC transporter permease 1969228 4358524 RPE_1769 Rhodopseudomonas palustris BisA53 sulfate ABC transporter permease YP_780697.1 1968392 D 316055 CDS YP_780698.1 115523787 4358525 1969232..1970134 1 NC_008435.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_4008 sulfate ABC transporter, permease protein CysW; sulfate ABC transporter inner membrane subunit CysW 1970134 4358525 RPE_1770 Rhodopseudomonas palustris BisA53 sulfate ABC transporter inner membrane subunit CysW YP_780698.1 1969232 D 316055 CDS YP_780699.1 115523788 4358526 1970124..1971173 1 NC_008435.1 KEGG: rpc:RPC_4007 sulphate transport system permease protein 1; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate transport system permease 1 1971173 4358526 RPE_1771 Rhodopseudomonas palustris BisA53 sulfate transport system permease 1 YP_780699.1 1970124 D 316055 CDS YP_780700.1 115523789 4358527 1971268..1971774 1 NC_008435.1 PFAM: Allergen V5/Tpx-1 family protein; KEGG: rpc:RPC_4004 allergen V5/TPX-1 related; allergen V5/Tpx-1-like protein 1971774 4358527 RPE_1772 Rhodopseudomonas palustris BisA53 allergen V5/Tpx-1-like protein YP_780700.1 1971268 D 316055 CDS YP_780701.1 115523790 4358528 1971930..1972718 1 NC_008435.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_4002 3-hydroxybutyrate dehydrogenase; 3-hydroxybutyrate dehydrogenase 1972718 4358528 RPE_1773 Rhodopseudomonas palustris BisA53 3-hydroxybutyrate dehydrogenase YP_780701.1 1971930 D 316055 CDS YP_780702.1 115523791 4358529 1972900..1973985 1 NC_008435.1 KEGG: ccr:CC2989 hypothetical protein; hypothetical protein 1973985 4358529 RPE_1774 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780702.1 1972900 D 316055 CDS YP_780703.1 115523792 4358530 complement(1974001..1974261) 1 NC_008435.1 KEGG: ccr:CC0488 conserved hypothetical protein; hypothetical protein 1974261 4358530 RPE_1775 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780703.1 1974001 R 316055 CDS YP_780704.1 115523793 4358531 complement(1974230..1974535) 1 NC_008435.1 PFAM: protein of unknown function DUF497; KEGG: syn:sll1651 hypothetical protein; hypothetical protein 1974535 4358531 RPE_1776 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780704.1 1974230 R 316055 CDS YP_780705.1 115523794 4358532 complement(1974679..1974897) 1 NC_008435.1 hypothetical protein 1974897 4358532 RPE_1777 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780705.1 1974679 R 316055 CDS YP_780706.1 115523795 4358533 1975035..1975790 1 NC_008435.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rpa:RPA0992 probable transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 1975790 4358533 RPE_1778 Rhodopseudomonas palustris BisA53 Crp/FNR family transcriptional regulator YP_780706.1 1975035 D 316055 CDS YP_780707.1 115523796 4358534 1977399..1978562 1 NC_008435.1 PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rpd:RPD_1719 peptidase C14, caspase catalytic subunit P20; peptidase C14, caspase catalytic subunit p20 1978562 4358534 RPE_1779 Rhodopseudomonas palustris BisA53 peptidase C14, caspase catalytic subunit p20 YP_780707.1 1977399 D 316055 CDS YP_780708.1 115523797 4358535 complement(1978660..1980237) 1 NC_008435.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1980237 4358535 RPE_1780 Rhodopseudomonas palustris BisA53 long-chain-fatty-acid--CoA ligase YP_780708.1 1978660 R 316055 CDS YP_780709.1 115523798 4358536 complement(1980655..1981527) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_3599 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1981527 4358536 RPE_1781 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_780709.1 1980655 R 316055 CDS YP_780710.1 115523799 4358537 1981630..1982442 1 NC_008435.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1982442 4358537 RPE_1782 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase YP_780710.1 1981630 D 316055 CDS YP_780711.1 115523800 4358538 1982559..1984103 1 NC_008435.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1984103 4358538 RPE_1783 Rhodopseudomonas palustris BisA53 long-chain-fatty-acid--CoA ligase YP_780711.1 1982559 D 316055 CDS YP_780712.1 115523801 4358539 complement(1984104..1984994) 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_1679 transcriptional regulator, LysR family; LysR family transcriptional regulator 1984994 4358539 RPE_1784 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_780712.1 1984104 R 316055 CDS YP_780713.1 115523802 4358364 complement(1984999..1986087) 1 NC_008435.1 PFAM: conserved hypothetical protein 698; KEGG: rpc:RPC_1680 conserved hypothetical protein 698; hypothetical protein 1986087 4358364 RPE_1785 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780713.1 1984999 R 316055 CDS YP_780714.1 115523803 4358365 complement(1986218..1989013) 1 NC_008435.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: rpc:RPC_1681 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 1989013 4358365 RPE_1786 Rhodopseudomonas palustris BisA53 multi-sensor hybrid histidine kinase YP_780714.1 1986218 R 316055 CDS YP_780715.1 115523804 4358366 complement(1989251..1989508) 1 NC_008435.1 KEGG: rpc:RPC_1682 hypothetical protein; hypothetical protein 1989508 4358366 RPE_1787 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780715.1 1989251 R 316055 CDS YP_780716.1 115523805 4358367 1989679..1989960 1 NC_008435.1 PFAM: type IV pilus assembly PilZ; KEGG: rpd:RPD_2833 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1989960 4358367 RPE_1788 Rhodopseudomonas palustris BisA53 type IV pilus assembly PilZ YP_780716.1 1989679 D 316055 CDS YP_780717.1 115523806 4358368 complement(1990000..1991046) 1 NC_008435.1 KEGG: bja:bll4192 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1991046 4358368 RPE_1789 Rhodopseudomonas palustris BisA53 metal dependent phosphohydrolase YP_780717.1 1990000 R 316055 CDS YP_780718.1 115523807 4358369 1991353..1993497 1 NC_008435.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpd:RPD_0706 FAD dependent oxidoreductase; amine oxidase 1993497 4358369 RPE_1790 Rhodopseudomonas palustris BisA53 amine oxidase YP_780718.1 1991353 D 316055 CDS YP_780719.1 115523808 4358370 1993634..1996417 1 NC_008435.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 1996417 4358370 RPE_1791 Rhodopseudomonas palustris BisA53 phosphoenolpyruvate carboxylase YP_780719.1 1993634 D 316055 CDS YP_780720.1 115523809 4358371 1996794..1998134 1 NC_008435.1 PFAM: OmpA/MotB domain protein; KEGG: rpb:RPB_3590 OmpA/MotB; OmpA/MotB domain-containing protein 1998134 4358371 RPE_1792 Rhodopseudomonas palustris BisA53 OmpA/MotB domain-containing protein YP_780720.1 1996794 D 316055 CDS YP_780721.1 115523810 4358372 complement(1998350..1999318) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpd:RPD_1878 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1999318 4358372 RPE_1793 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_780721.1 1998350 R 316055 CDS YP_780722.1 115523811 4358373 complement(1999484..2000623) 1 NC_008435.1 KEGG: rpa:RPA1776 possible lipid transfer protein; putative lipid transfer protein 2000623 4358373 RPE_1794 Rhodopseudomonas palustris BisA53 putative lipid transfer protein YP_780722.1 1999484 R 316055 CDS YP_780723.1 115523812 4358374 complement(2000628..2001041) 1 NC_008435.1 PFAM: protein of unknown function DUF35; KEGG: bja:bll2959 hypothetical protein; hypothetical protein 2001041 4358374 RPE_1795 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780723.1 2000628 R 316055 CDS YP_780724.1 115523813 4358375 2001517..2002866 1 NC_008435.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 2002866 4358375 RPE_1796 Rhodopseudomonas palustris BisA53 amidase YP_780724.1 2001517 D 316055 CDS YP_780725.1 115523814 4358376 2002859..2003545 1 NC_008435.1 KEGG: rpd:RPD_1882 hypothetical protein; hypothetical protein 2003545 4358376 RPE_1797 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780725.1 2002859 D 316055 CDS YP_780726.1 115523815 4358377 2003601..2004824 1 NC_008435.1 KEGG: bja:blr2964 hypothetical protein; hypothetical protein 2004824 4358377 RPE_1798 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780726.1 2003601 D 316055 CDS YP_780727.1 115523816 4358378 complement(2004902..2005123) 1 NC_008435.1 KEGG: rpb:RPB_1412 hypothetical protein; hypothetical protein 2005123 4358378 RPE_1799 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780727.1 2004902 R 316055 CDS YP_780728.1 115523817 4358379 complement(2005264..2005593) 1 NC_008435.1 KEGG: rpc:RPC_1692 hypothetical protein; hypothetical protein 2005593 4358379 RPE_1800 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780728.1 2005264 R 316055 CDS YP_780729.1 115523818 4358380 complement(2005932..2007554) 1 NC_008435.1 PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rpd:RPD_3594 thiamine pyrophosphate enzyme-like TPP-binding; hypothetical protein 2007554 4358380 RPE_1801 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780729.1 2005932 R 316055 CDS YP_780730.1 115523819 4358381 2007725..2008504 1 NC_008435.1 PFAM: HpcH/HpaI aldolase; KEGG: rpa:RPA3755 putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; HpcH/HpaI aldolase 2008504 4358381 RPE_1802 Rhodopseudomonas palustris BisA53 HpcH/HpaI aldolase YP_780730.1 2007725 D 316055 CDS YP_780731.1 115523820 4358382 2008727..2009191 1 NC_008435.1 KEGG: rpc:RPC_1708 cache, type 2; hypothetical protein 2009191 4358382 RPE_1803 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780731.1 2008727 D 316055 CDS YP_780732.1 115523821 4358383 2009241..2010950 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_1709 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2010950 4358383 RPE_1804 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780732.1 2009241 D 316055 CDS YP_780733.1 115523822 4358384 2011017..2012405 1 NC_008435.1 PFAM: Ethanolamine ammonia lyase large subunit; KEGG: rpc:RPC_1711 ethanolamine ammonia lyase large subunit; ethanolamine ammonia lyase large subunit 2012405 4358384 RPE_1805 Rhodopseudomonas palustris BisA53 ethanolamine ammonia lyase large subunit YP_780733.1 2011017 D 316055 CDS YP_780734.1 115523823 4358385 2012647..2014233 1 NC_008435.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpc:RPC_1712 radical SAM; radical SAM domain-containing protein 2014233 4358385 RPE_1806 Rhodopseudomonas palustris BisA53 radical SAM domain-containing protein YP_780734.1 2012647 D 316055 CDS YP_780735.1 115523824 4358386 2014244..2015029 1 NC_008435.1 catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 2015029 4358386 RPE_1807 Rhodopseudomonas palustris BisA53 ethanolamine ammonia-lyase small subunit YP_780735.1 2014244 D 316055 CDS YP_780736.1 115523825 4358387 2015220..2017589 1 NC_008435.1 KEGG: rpc:RPC_1714 putative RND superfamily transporter; RND superfamily transporter 2017589 4358387 RPE_1808 Rhodopseudomonas palustris BisA53 RND superfamily transporter YP_780736.1 2015220 D 316055 CDS YP_780737.1 115523826 4358388 complement(2017668..2018168) 1 NC_008435.1 KEGG: rpc:RPC_1715 hypothetical protein; hypothetical protein 2018168 4358388 RPE_1809 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780737.1 2017668 R 316055 CDS YP_780738.1 115523827 4358389 2018737..2018976 1 NC_008435.1 KEGG: rpc:RPC_1716 hypothetical protein; hypothetical protein 2018976 4358389 RPE_1810 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780738.1 2018737 D 316055 CDS YP_780739.1 115523828 4358390 2019130..2020035 1 NC_008435.1 PFAM: Squalene/phytoene synthase; KEGG: rpc:RPC_1717 squalene/phytoene synthase; squalene/phytoene synthase 2020035 4358390 RPE_1811 Rhodopseudomonas palustris BisA53 squalene/phytoene synthase YP_780739.1 2019130 D 316055 CDS YP_780740.1 115523829 4358391 2020032..2020871 1 NC_008435.1 PFAM: Squalene/phytoene synthase; KEGG: rpc:RPC_1718 squalene/phytoene synthase; squalene/phytoene synthase 2020871 4358391 RPE_1812 Rhodopseudomonas palustris BisA53 squalene/phytoene synthase YP_780740.1 2020032 D 316055 CDS YP_780741.1 115523830 4358392 2020871..2022124 1 NC_008435.1 PFAM: amine oxidase; KEGG: rpc:RPC_1719 amine oxidase; amine oxidase 2022124 4358392 RPE_1813 Rhodopseudomonas palustris BisA53 amine oxidase YP_780741.1 2020871 D 316055 CDS YP_780742.1 115523831 4358393 2022346..2023080 1 NC_008435.1 PFAM: purine and other phosphorylases, family 1; KEGG: rpc:RPC_1721 hypothetical protein; hypothetical protein 2023080 4358393 RPE_1814 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780742.1 2022346 D 316055 CDS YP_780743.1 115523832 4358394 complement(2023021..2024169) 1 NC_008435.1 PFAM: Radical SAM domain protein; KEGG: rpc:RPC_1725 radical SAM; radical SAM domain-containing protein 2024169 4358394 RPE_1815 Rhodopseudomonas palustris BisA53 radical SAM domain-containing protein YP_780743.1 2023021 R 316055 CDS YP_780744.1 115523833 4358395 complement(2024221..2025165) 1 NC_008435.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2025165 ispH 4358395 ispH Rhodopseudomonas palustris BisA53 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_780744.1 2024221 R 316055 CDS YP_780745.1 115523834 4358396 2025465..2028053 1 NC_008435.1 KEGG: rpc:RPC_1727 hypothetical protein; hypothetical protein 2028053 4358396 RPE_1817 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780745.1 2025465 D 316055 CDS YP_780746.1 115523835 4358397 complement(2028021..2028605) 1 NC_008435.1 KEGG: bja:bll3009 hypothetical protein; hypothetical protein 2028605 4358397 RPE_1818 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780746.1 2028021 R 316055 CDS YP_780747.1 115523836 4358398 2028758..2030149 1 NC_008435.1 PFAM: aminotransferase class-III; KEGG: rpc:RPC_1728 aminotransferase class-III; class III aminotransferase 2030149 4358398 RPE_1819 Rhodopseudomonas palustris BisA53 class III aminotransferase YP_780747.1 2028758 D 316055 CDS YP_780748.1 115523837 4359261 complement(2030599..2032218) 1 NC_008435.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rpb:RPB_1733 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 2032218 4359261 RPE_1820 Rhodopseudomonas palustris BisA53 glucose-methanol-choline oxidoreductase YP_780748.1 2030599 R 316055 CDS YP_780749.1 115523838 4359262 2032382..2033554 1 NC_008435.1 KEGG: rpc:RPC_1729 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M20D, amidohydrolase 2033554 4359262 RPE_1821 Rhodopseudomonas palustris BisA53 peptidase M20D, amidohydrolase YP_780749.1 2032382 D 316055 CDS YP_780750.1 115523839 4359263 2033660..2034157 1 NC_008435.1 PFAM: protein of unknown function DUF892; KEGG: rpc:RPC_1730 protein of unknown function DUF892; hypothetical protein 2034157 4359263 RPE_1822 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780750.1 2033660 D 316055 CDS YP_780751.1 115523840 4359264 complement(2034606..2036048) 1 NC_008435.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rpd:RPD_1899 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein 2036048 4359264 RPE_1823 Rhodopseudomonas palustris BisA53 phage SPO1 DNA polymerase-like protein YP_780751.1 2034606 R 316055 CDS YP_780752.1 115523841 4359265 complement(2036150..2037388) 1 NC_008435.1 PFAM: Radical SAM domain protein; KEGG: rpd:RPD_1900 radical SAM; radical SAM domain-containing protein 2037388 4359265 RPE_1824 Rhodopseudomonas palustris BisA53 radical SAM domain-containing protein YP_780752.1 2036150 R 316055 CDS YP_780753.1 115523842 4359266 2037555..2038337 1 NC_008435.1 KEGG: rpb:RPB_3565 hypothetical protein; hypothetical protein 2038337 4359266 RPE_1825 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780753.1 2037555 D 316055 CDS YP_780754.1 115523843 4359267 2038387..2039823 1 NC_008435.1 KEGG: rpb:RPB_3564 hypothetical protein; hypothetical protein 2039823 4359267 RPE_1826 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780754.1 2038387 D 316055 CDS YP_780755.1 115523844 4359268 2039930..2043391 1 NC_008435.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 2043391 dnaE2 4359268 dnaE2 Rhodopseudomonas palustris BisA53 error-prone DNA polymerase YP_780755.1 2039930 D 316055 CDS YP_780756.1 115523845 4359269 complement(2043421..2043885) 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nar:Saro_0459 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2043885 4359269 RPE_1828 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_780756.1 2043421 R 316055 CDS YP_780757.1 115523846 4359270 2044084..2044926 1 NC_008435.1 KEGG: nmu:Nmul_A2382 PDZ/DHR/GLGF; hypothetical protein 2044926 4359270 RPE_1829 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780757.1 2044084 D 316055 CDS YP_780758.1 115523847 4359271 complement(2045019..2045306) 1 NC_008435.1 TIGRFAM: putative addiction module antidote protein, CC2985 family; PFAM: protein of unknown function UPF0156; KEGG: rru:Rru_A3537 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain; CopG/Arc/MetJ family transcriptional regulator 2045306 4359271 RPE_1830 Rhodopseudomonas palustris BisA53 CopG/Arc/MetJ family transcriptional regulator YP_780758.1 2045019 R 316055 CDS YP_780759.1 115523848 4359272 complement(2045344..2045886) 1 NC_008435.1 KEGG: syn:slr0668 hypothetical protein; hypothetical protein 2045886 4359272 RPE_1831 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780759.1 2045344 R 316055 CDS YP_780760.1 115523849 4359273 complement(2045879..2046409) 1 NC_008435.1 KEGG: syn:slr0667 hypothetical protein; hypothetical protein 2046409 4359273 RPE_1832 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780760.1 2045879 R 316055 CDS YP_780761.1 115523850 4359274 2046911..2047327 1 NC_008435.1 hypothetical protein 2047327 4359274 RPE_1833 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780761.1 2046911 D 316055 CDS YP_780762.1 115523851 4359275 complement(2047420..2049771) 1 NC_008435.1 KEGG: rpc:RPC_1734 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2049771 4359275 RPE_1834 Rhodopseudomonas palustris BisA53 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_780762.1 2047420 R 316055 CDS YP_780763.1 115523852 4359276 2050069..2050395 1 NC_008435.1 KEGG: rpc:RPC_1736 hypothetical protein; hypothetical protein 2050395 4359276 RPE_1835 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780763.1 2050069 D 316055 CDS YP_780764.1 115523853 4359277 complement(2050524..2051303) 1 NC_008435.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_1738 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2051303 4359277 RPE_1836 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase/isomerase YP_780764.1 2050524 R 316055 CDS YP_780765.1 115523854 4359278 complement(2051409..2052068) 1 NC_008435.1 KEGG: rpa:RPA1812 hypothetical protein; hypothetical protein 2052068 4359278 RPE_1837 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780765.1 2051409 R 316055 CDS YP_780766.1 115523855 4359279 complement(2052226..2053362) 1 NC_008435.1 KEGG: rpc:RPC_1744 hypothetical protein; hypothetical protein 2053362 4359279 RPE_1838 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780766.1 2052226 R 316055 CDS YP_780767.1 115523856 4359280 complement(2053359..2054459) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_1745 diguanylate cyclase (GGDEF domain); diguanylate cyclase 2054459 4359280 RPE_1839 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_780767.1 2053359 R 316055 CDS YP_780768.1 115523857 4359281 2054890..2055456 1 NC_008435.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2055456 4359281 RPE_1840 Rhodopseudomonas palustris BisA53 RNA polymerase sigma factor YP_780768.1 2054890 D 316055 CDS YP_780769.1 115523858 4359282 2055453..2056256 1 NC_008435.1 KEGG: rpd:RPD_1916 hypothetical protein; hypothetical protein 2056256 4359282 RPE_1841 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780769.1 2055453 D 316055 CDS YP_780770.1 115523859 4359283 2056749..2057219 1 NC_008435.1 KEGG: rpc:RPC_1747 hypothetical protein; hypothetical protein 2057219 4359283 RPE_1842 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780770.1 2056749 D 316055 CDS YP_780771.1 115523860 4359284 complement(2057229..2058593) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_1748 twin-arginine translocation pathway signal; hypothetical protein 2058593 4359284 RPE_1843 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780771.1 2057229 R 316055 CDS YP_780772.1 115523861 4359285 complement(2058713..2058958) 1 NC_008435.1 KEGG: rpc:RPC_1752 hypothetical protein; hypothetical protein 2058958 4359285 RPE_1844 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780772.1 2058713 R 316055 CDS YP_780773.1 115523862 4359286 complement(2059033..2059692) 1 NC_008435.1 PFAM: peptidase C15, pyroglutamyl peptidase I; KEGG: rpc:RPC_1753 peptidase C15, pyroglutamyl peptidase I; peptidase C15, pyroglutamyl peptidase I 2059692 4359286 RPE_1845 Rhodopseudomonas palustris BisA53 peptidase C15, pyroglutamyl peptidase I YP_780773.1 2059033 R 316055 CDS YP_780774.1 115523863 4359287 complement(2059689..2060675) 1 NC_008435.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 2060675 4359287 RPE_1846 Rhodopseudomonas palustris BisA53 arginine/ornithine transport system ATPase YP_780774.1 2059689 R 316055 CDS YP_780775.1 115523864 4359288 complement(2060672..2061457) 1 NC_008435.1 KEGG: rpc:RPC_1755 hypothetical protein; hypothetical protein 2061457 4359288 RPE_1847 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780775.1 2060672 R 316055 CDS YP_780776.1 115523865 4359289 complement(2061505..2061849) 1 NC_008435.1 PFAM: protein of unknown function DUF86; KEGG: rpc:RPC_1756 protein of unknown function DUF86; hypothetical protein 2061849 4359289 RPE_1848 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780776.1 2061505 R 316055 CDS YP_780777.1 115523866 4359290 complement(2061851..2062168) 1 NC_008435.1 PFAM: DNA polymerase, beta domain protein region; KEGG: rpc:RPC_1757 DNA polymerase, beta-like region; DNA polymerase subunit beta 2062168 4359290 RPE_1849 Rhodopseudomonas palustris BisA53 DNA polymerase subunit beta YP_780777.1 2061851 R 316055 CDS YP_780778.1 115523867 4359291 complement(2062627..2063157) 1 NC_008435.1 hypothetical protein 2063157 4359291 RPE_1850 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780778.1 2062627 R 316055 CDS YP_780779.1 115523868 4359292 complement(2063287..2063562) 1 NC_008435.1 TIGRFAM: prevent-host-death family protein; KEGG: rpc:RPC_1759 prevent-host-death protein; prevent-host-death family protein 2063562 4359292 RPE_1851 Rhodopseudomonas palustris BisA53 prevent-host-death family protein YP_780779.1 2063287 R 316055 CDS YP_780780.1 115523869 4359293 complement(2063567..2065723) 1 NC_008435.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 2065723 4359293 RPE_1852 Rhodopseudomonas palustris BisA53 methylmalonyl-CoA mutase YP_780780.1 2063567 R 316055 CDS YP_780781.1 115523870 4359294 complement(2065781..2066245) 1 NC_008435.1 PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rpc:RPC_1761 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 2066245 4359294 RPE_1853 Rhodopseudomonas palustris BisA53 glutathione-dependent formaldehyde-activating protein YP_780781.1 2065781 R 316055 CDS YP_780782.1 115523871 4359295 complement(2066242..2068113) 1 NC_008435.1 PFAM: methylmalonyl-CoA mutase; KEGG: rpc:RPC_1762 methylmalonyl-CoA mutase; methylmalonyl-CoA mutase 2068113 4359295 RPE_1854 Rhodopseudomonas palustris BisA53 methylmalonyl-CoA mutase YP_780782.1 2066242 R 316055 CDS YP_780783.1 115523872 4360047 complement(2068212..2068703) 1 NC_008435.1 KEGG: rpc:RPC_1763 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2068703 4360047 RPE_1855 Rhodopseudomonas palustris BisA53 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_780783.1 2068212 R 316055 CDS YP_780784.1 115523873 4360048 complement(2068696..2069076) 1 NC_008435.1 TIGRFAM: dihydroneopterin aldolase; KEGG: rpb:RPB_3534 dihydroneopterin aldolase; dihydroneopterin aldolase 2069076 4360048 RPE_1856 Rhodopseudomonas palustris BisA53 dihydroneopterin aldolase YP_780784.1 2068696 R 316055 CDS YP_780785.1 115523874 4360049 complement(2069073..2069930) 1 NC_008435.1 KEGG: rpc:RPC_1765 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase 2069930 4360049 RPE_1857 Rhodopseudomonas palustris BisA53 dihydropteroate synthase YP_780785.1 2069073 R 316055 CDS YP_780786.1 115523875 4360050 complement(2070058..2070465) 1 NC_008435.1 KEGG: rpc:RPC_1766 hypothetical protein; hypothetical protein 2070465 4360050 RPE_1858 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780786.1 2070058 R 316055 CDS YP_780787.1 115523876 4360051 complement(2070531..2070896) 1 NC_008435.1 KEGG: rpc:RPC_1767 hypothetical protein; hypothetical protein 2070896 4360051 RPE_1859 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780787.1 2070531 R 316055 CDS YP_780788.1 115523877 4360052 2071229..2072851 1 NC_008435.1 PFAM: protein of unknown function DUF853, NPT hydrolase putative; KEGG: rpa:RPA1843 hypothetical protein; hypothetical protein 2072851 4360052 RPE_1860 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780788.1 2071229 D 316055 CDS YP_780789.1 115523878 4360053 2072892..2074295 1 NC_008435.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rpd:RPD_1937 peptidase M20; hypothetical protein 2074295 4360053 RPE_1861 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780789.1 2072892 D 316055 CDS YP_780790.1 115523879 4360054 complement(2074418..2076412) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_2457 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2076412 4360054 RPE_1862 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780790.1 2074418 R 316055 CDS YP_780791.1 115523880 4360055 complement(2076741..2078144) 1 NC_008435.1 PFAM: chemotaxis sensory transducer; KEGG: rpb:RPB_3522 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2078144 4360055 RPE_1863 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780791.1 2076741 R 316055 CDS YP_780792.1 115523881 4360056 complement(2078453..2078593) 1 NC_008435.1 KEGG: bja:bll3066 hypothetical protein; hypothetical protein 2078593 4360056 RPE_1864 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780792.1 2078453 R 316055 CDS YP_780793.1 115523882 4360057 complement(2078647..2079501) 1 NC_008435.1 PFAM: beta-lactamase; KEGG: bja:bll0941 beta-lactamase L2 precursor; Beta-lactamase 2079501 4360057 RPE_1865 Rhodopseudomonas palustris BisA53 Beta-lactamase YP_780793.1 2078647 R 316055 CDS YP_780794.1 115523883 4360058 complement(2079565..2081214) 1 NC_008435.1 KEGG: rpc:RPC_1772 hypothetical protein; hypothetical protein 2081214 4360058 RPE_1866 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780794.1 2079565 R 316055 CDS YP_780795.1 115523884 4360059 2081521..2082471 1 NC_008435.1 KEGG: rpc:RPC_1773 hypothetical protein; hypothetical protein 2082471 4360059 RPE_1867 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780795.1 2081521 D 316055 CDS YP_780796.1 115523885 4360060 2082682..2083098 1 NC_008435.1 PFAM: ROSMUCR transcriptional regulator; KEGG: rpc:RPC_1774 transcriptional regulator, MucR family; MucR family transcriptional regulator 2083098 4360060 RPE_1868 Rhodopseudomonas palustris BisA53 MucR family transcriptional regulator YP_780796.1 2082682 D 316055 CDS YP_780797.1 115523886 4360061 2083352..2084008 1 NC_008435.1 KEGG: rpc:RPC_1776 hypothetical protein; hypothetical protein 2084008 4360061 RPE_1869 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780797.1 2083352 D 316055 CDS YP_780798.1 115523887 4360062 complement(2084013..2084447) 1 NC_008435.1 PFAM: Fe-S metabolism associated SufE; KEGG: rpc:RPC_1777 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 2084447 4360062 RPE_1870 Rhodopseudomonas palustris BisA53 Fe-S metabolism associated SufE YP_780798.1 2084013 R 316055 CDS YP_780799.1 115523888 4360063 complement(2084683..2085117) 1 NC_008435.1 KEGG: rpc:RPC_1778 hypothetical protein; hypothetical protein 2085117 4360063 RPE_1871 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780799.1 2084683 R 316055 CDS YP_780800.1 115523889 4360064 2085534..2087381 1 NC_008435.1 KEGG: rpc:RPC_1779 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 2087381 4360064 RPE_1872 Rhodopseudomonas palustris BisA53 multi-sensor signal transduction histidine kinase YP_780800.1 2085534 D 316055 CDS YP_780801.1 115523890 4360065 2087374..2088042 1 NC_008435.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_1780 peptidoglycan-binding domain 1; peptidoglycan binding domain-containing protein 2088042 4360065 RPE_1873 Rhodopseudomonas palustris BisA53 peptidoglycan binding domain-containing protein YP_780801.1 2087374 D 316055 CDS YP_780802.1 115523891 4360066 2088080..2088424 1 NC_008435.1 PFAM: protein of unknown function DUF1491; KEGG: rpc:RPC_1781 protein of unknown function DUF1491; hypothetical protein 2088424 4360066 RPE_1874 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780802.1 2088080 D 316055 CDS YP_780803.1 115523892 4360067 complement(2088421..2089386) 1 NC_008435.1 KEGG: rpc:RPC_1782 hypothetical protein; hypothetical protein 2089386 4360067 RPE_1875 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780803.1 2088421 R 316055 CDS YP_780804.1 115523893 4360068 complement(2089533..2089796) 1 NC_008435.1 KEGG: rpc:RPC_1783 hypothetical protein; hypothetical protein 2089796 4360068 RPE_1876 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780804.1 2089533 R 316055 CDS YP_780805.1 115523894 4360069 2090230..2091000 1 NC_008435.1 KEGG: rpc:RPC_1784 hypothetical protein; hypothetical protein 2091000 4360069 RPE_1877 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780805.1 2090230 D 316055 CDS YP_780806.1 115523895 4360070 complement(2091197..2091760) 1 NC_008435.1 KEGG: rpc:RPC_1785 hypothetical protein; hypothetical protein 2091760 4360070 RPE_1878 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780806.1 2091197 R 316055 CDS YP_780807.1 115523896 4360071 complement(2091757..2092335) 1 NC_008435.1 PFAM: protein of unknown function DUF1214; KEGG: rpc:RPC_1786 protein of unknown function DUF1214; hypothetical protein 2092335 4360071 RPE_1879 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780807.1 2091757 R 316055 CDS YP_780808.1 115523897 4360072 complement(2092370..2094628) 1 NC_008435.1 KEGG: rpc:RPC_1787 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 2094628 4360072 RPE_1880 Rhodopseudomonas palustris BisA53 1A family penicillin-binding protein YP_780808.1 2092370 R 316055 CDS YP_780809.1 115523898 4360073 2094954..2095466 1 NC_008435.1 PFAM: protein of unknown function UPF0153; KEGG: bja:blr3103 hypothetical protein; hypothetical protein 2095466 4360073 RPE_1881 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780809.1 2094954 D 316055 CDS YP_780810.1 115523899 4360074 2095579..2095743 1 NC_008435.1 PFAM: Flp/Fap pilin component; KEGG: rpc:RPC_1796 Flp/Fap pilin component; Flp/Fap pilin component 2095743 4360074 RPE_1882 Rhodopseudomonas palustris BisA53 Flp/Fap pilin component YP_780810.1 2095579 D 316055 CDS YP_780811.1 115523900 4360075 2096435..2098120 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_1795 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2098120 4360075 RPE_1883 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780811.1 2096435 D 316055 CDS YP_780812.1 115523901 4360076 2098542..2100296 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_3379 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2100296 4360076 RPE_1884 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780812.1 2098542 D 316055 CDS YP_780813.1 115523902 4360077 2100556..2102259 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_3380 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2102259 4360077 RPE_1885 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780813.1 2100556 D 316055 CDS YP_780814.1 115523903 4360078 2102277..2102678 1 NC_008435.1 hypothetical protein 2102678 4360078 RPE_1886 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780814.1 2102277 D 316055 CDS YP_780815.1 115523904 4360079 2103027..2104064 1 NC_008435.1 PFAM: helix-turn-helix- domain containing protein, AraC type; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: rpc:RPC_1252 transcriptional regulator, AraC family; AraC family transcriptional regulator 2104064 4360079 RPE_1887 Rhodopseudomonas palustris BisA53 AraC family transcriptional regulator YP_780815.1 2103027 D 316055 CDS YP_780816.1 115523905 4360080 complement(2104070..2104417) 1 NC_008435.1 hypothetical protein 2104417 4360080 RPE_1888 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780816.1 2104070 R 316055 CDS YP_780817.1 115523906 4360081 2104472..2106157 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_1795 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2106157 4360081 RPE_1889 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780817.1 2104472 D 316055 CDS YP_780818.1 115523907 4359906 2106226..2106744 1 NC_008435.1 hypothetical protein 2106744 4359906 RPE_1890 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780818.1 2106226 D 316055 CDS YP_780819.1 115523908 4359907 2107081..2107233 1 NC_008435.1 KEGG: rpc:RPC_1798 hypothetical protein; hypothetical protein 2107233 4359907 RPE_1891 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780819.1 2107081 D 316055 CDS YP_780820.1 115523909 4359908 2107336..2108199 1 NC_008435.1 KEGG: rpc:RPC_1799 hypothetical protein; hypothetical protein 2108199 4359908 RPE_1892 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780820.1 2107336 D 316055 CDS YP_780821.1 115523910 4359909 2108192..2109463 1 NC_008435.1 PFAM: protein of unknown function DUF264; KEGG: rpc:RPC_1800 protein of unknown function DUF264; hypothetical protein 2109463 4359909 RPE_1893 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780821.1 2108192 D 316055 CDS YP_780822.1 115523911 4359910 complement(2109637..2109924) 1 NC_008435.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpd:RPD_1965 excinuclease ABC, C subunit-like; excinuclease ABC subunit C 2109924 4359910 RPE_1894 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_780822.1 2109637 R 316055 CDS YP_780823.1 115523912 4359911 2110151..2111326 1 NC_008435.1 TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: rpc:RPC_1801 phage portal protein, HK97; HK97 family phage portal protein 2111326 4359911 RPE_1895 Rhodopseudomonas palustris BisA53 HK97 family phage portal protein YP_780823.1 2110151 D 316055 CDS YP_780824.1 115523913 4359912 2111512..2112234 1 NC_008435.1 PFAM: type IV pilus assembly PilZ; KEGG: rpc:RPC_1802 type IV pilus assembly PilZ; type IV pilus assembly PilZ 2112234 4359912 RPE_1896 Rhodopseudomonas palustris BisA53 type IV pilus assembly PilZ YP_780824.1 2111512 D 316055 CDS YP_780825.1 115523914 4359913 2112281..2112556 1 NC_008435.1 KEGG: rpc:RPC_1803 hypothetical protein; hypothetical protein 2112556 4359913 RPE_1897 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780825.1 2112281 D 316055 CDS YP_780826.1 115523915 4359914 2113586..2114212 1 NC_008435.1 TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35, phage prohead HK97; KEGG: rpb:RPB_3484 peptidase U35, phage prohead HK97; HK97 family phage prohead protease 2114212 4359914 RPE_1898 Rhodopseudomonas palustris BisA53 HK97 family phage prohead protease YP_780826.1 2113586 D 316055 CDS YP_780827.1 115523916 4359916 2115040..2115495 1 NC_008435.1 hypothetical protein 2115495 4359916 RPE_1900 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780827.1 2115040 D 316055 CDS YP_780828.1 115523917 4359917 2115916..2117013 1 NC_008435.1 PFAM: transposase, IS4 family protein; KEGG: rpc:RPC_2070 transposase, IS4; transposase, IS4 family protein 2117013 4359917 RPE_1901 Rhodopseudomonas palustris BisA53 transposase, IS4 family protein YP_780828.1 2115916 D 316055 CDS YP_780829.1 115523918 4359918 2117083..2117835 1 NC_008435.1 KEGG: rpb:RPB_3488 hypothetical protein; hypothetical protein 2117835 4359918 RPE_1902 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780829.1 2117083 D 316055 CDS YP_780830.1 115523919 4359922 complement(2120748..2121134) 1 NC_008435.1 hypothetical protein 2121134 4359922 RPE_1906 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780830.1 2120748 R 316055 CDS YP_780831.1 115523920 4359923 2121414..2121683 1 NC_008435.1 KEGG: rpb:RPB_3482 hypothetical protein; hypothetical protein 2121683 4359923 RPE_1907 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780831.1 2121414 D 316055 CDS YP_780832.1 115523921 4359924 2121860..2123185 1 NC_008435.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: phage major capsid protein, HK97; KEGG: nwi:Nwi_1167 phage major capsid protein, HK97; HK97 family phage major capsid protein 2123185 4359924 RPE_1908 Rhodopseudomonas palustris BisA53 HK97 family phage major capsid protein YP_780832.1 2121860 D 316055 CDS YP_780833.1 115523922 4359925 complement(2123245..2123484) 1 NC_008435.1 hypothetical protein 2123484 4359925 RPE_1909 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780833.1 2123245 R 316055 CDS YP_780834.1 115523923 4359926 2123694..2124599 1 NC_008435.1 KEGG: nwi:Nwi_1168 hypothetical protein; hypothetical protein 2124599 4359926 RPE_1910 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780834.1 2123694 D 316055 CDS YP_780835.1 115523924 4359927 2124596..2124985 1 NC_008435.1 KEGG: rpc:RPC_1809 hypothetical protein; hypothetical protein 2124985 4359927 RPE_1911 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780835.1 2124596 D 316055 CDS YP_780836.1 115523925 4359928 complement(2125079..2125360) 1 NC_008435.1 KEGG: rpc:RPC_1810 hypothetical protein; hypothetical protein 2125360 4359928 RPE_1912 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780836.1 2125079 R 316055 CDS YP_780837.1 115523926 4359929 complement(2125599..2126357) 1 NC_008435.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: rpc:RPC_1812 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap 2126357 4359929 RPE_1913 Rhodopseudomonas palustris BisA53 peptidase S1 and S6, chymotrypsin/Hap YP_780837.1 2125599 R 316055 CDS YP_780838.1 115523927 4359930 2126409..2126972 1 NC_008435.1 TIGRFAM: phiE125 gp8 family; KEGG: rpc:RPC_1813 phage conserved hypothetical protein, phiE125 gp8; bacteriophage protein 2126972 4359930 RPE_1914 Rhodopseudomonas palustris BisA53 bacteriophage protein YP_780838.1 2126409 D 316055 CDS YP_780839.1 115523928 4359931 2126969..2127289 1 NC_008435.1 TIGRFAM: phage head-tail adaptor, putative; KEGG: rpd:RPD_1981 hypothetical protein; phage head-tail adaptor 2127289 4359931 RPE_1915 Rhodopseudomonas palustris BisA53 phage head-tail adaptor YP_780839.1 2126969 D 316055 CDS YP_780840.1 115523929 4359932 2127323..2127733 1 NC_008435.1 KEGG: rpc:RPC_1815 gene transfer agent (GTA) orfg8; hypothetical protein 2127733 4359932 RPE_1916 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780840.1 2127323 D 316055 CDS YP_780841.1 115523930 4359933 2127747..2128154 1 NC_008435.1 TIGRFAM: phage major tail protein, TP901-1 family; KEGG: rpc:RPC_1816 phage major tail protein, TP901-1; TP901-1 family phage major tail protein 2128154 4359933 RPE_1917 Rhodopseudomonas palustris BisA53 TP901-1 family phage major tail protein YP_780841.1 2127747 D 316055 CDS YP_780842.1 115523931 4359934 2128165..2128485 1 NC_008435.1 KEGG: nha:Nham_1420 gene transfer agent (GTA) like protein; gene transfer agent (GTA) like protein 2128485 4359934 RPE_1918 Rhodopseudomonas palustris BisA53 gene transfer agent (GTA) like protein YP_780842.1 2128165 D 316055 CDS YP_780843.1 115523932 4359935 2128482..2128709 1 NC_008435.1 KEGG: rpc:RPC_1819 hypothetical protein; hypothetical protein 2128709 4359935 RPE_1919 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780843.1 2128482 D 316055 CDS YP_780844.1 115523933 4359936 2128706..2129287 1 NC_008435.1 KEGG: rpc:RPC_1820 gene transfer agent (GTA) like protein; gene transfer agent (GTA) like protein 2129287 4359936 RPE_1920 Rhodopseudomonas palustris BisA53 gene transfer agent (GTA) like protein YP_780844.1 2128706 D 316055 CDS YP_780845.1 115523934 4359937 2129456..2130088 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_1821 hypothetical protein; hypothetical protein 2130088 4359937 RPE_1921 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780845.1 2129456 D 316055 CDS YP_780846.1 115523935 4359938 2130116..2131018 1 NC_008435.1 KEGG: rpd:RPD_1991 phage conserved hypothetical protein BR0599; bacteriophage protein 2131018 4359938 RPE_1922 Rhodopseudomonas palustris BisA53 bacteriophage protein YP_780846.1 2130116 D 316055 CDS YP_780847.1 115523936 4359939 2131075..2131518 1 NC_008435.1 TIGRFAM: putative phage cell wall peptidase, NlpC/P60 family; PFAM: NLP/P60 protein; KEGG: rpc:RPC_1823 putative phage cell wall peptidase, NlpC/P60; NlpC/P60 family phage cell wall peptidase 2131518 4359939 RPE_1923 Rhodopseudomonas palustris BisA53 NlpC/P60 family phage cell wall peptidase YP_780847.1 2131075 D 316055 CDS YP_780848.1 115523937 4359940 2131518..2135372 1 NC_008435.1 KEGG: rpc:RPC_1824 gene transfer agent (GTA) orfg15; gene transfer agent (GTA) orfg15 2135372 4359940 RPE_1924 Rhodopseudomonas palustris BisA53 gene transfer agent (GTA) orfg15 YP_780848.1 2131518 D 316055 CDS YP_780849.1 115523938 4359348 2135414..2137366 1 NC_008435.1 KEGG: rpc:RPC_1825 hypothetical protein; hypothetical protein 2137366 4359348 RPE_1925 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780849.1 2135414 D 316055 CDS YP_780850.1 115523939 4359349 2137430..2138227 1 NC_008435.1 KEGG: rpc:RPC_1828 putative glycohydrolase; putative glycohydrolase 2138227 4359349 RPE_1926 Rhodopseudomonas palustris BisA53 putative glycohydrolase YP_780850.1 2137430 D 316055 CDS YP_780851.1 115523940 4359350 2138256..2138801 1 NC_008435.1 KEGG: rpc:RPC_1829 hypothetical protein; hypothetical protein 2138801 4359350 RPE_1927 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780851.1 2138256 D 316055 CDS YP_780852.1 115523941 4359351 2138906..2139601 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_1830 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2139601 4359351 RPE_1928 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_780852.1 2138906 D 316055 CDS YP_780853.1 115523942 4359352 2139712..2141082 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_1831 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 2141082 4359352 RPE_1929 Rhodopseudomonas palustris BisA53 periplasmic sensor signal transduction histidine kinase YP_780853.1 2139712 D 316055 CDS YP_780854.1 115523943 4359353 2141171..2141641 1 NC_008435.1 KEGG: rpc:RPC_1832 LipA a lipoprotein; LipA a lipoprotein 2141641 4359353 RPE_1930 Rhodopseudomonas palustris BisA53 LipA a lipoprotein YP_780854.1 2141171 D 316055 CDS YP_780855.1 115523944 4359354 2141857..2143290 1 NC_008435.1 KEGG: rpc:RPC_1833 hypothetical protein; hypothetical protein 2143290 4359354 RPE_1931 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780855.1 2141857 D 316055 CDS YP_780856.1 115523945 4359355 2143424..2144530 1 NC_008435.1 KEGG: rpc:RPC_1834 tetratricopeptide TPR_2; hypothetical protein 2144530 4359355 RPE_1932 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780856.1 2143424 D 316055 CDS YP_780857.1 115523946 4359356 2144618..2145121 1 NC_008435.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 2145121 4359356 RPE_1933 Rhodopseudomonas palustris BisA53 cytochrome c-type biogenesis protein CcmE YP_780857.1 2144618 D 316055 CDS YP_780858.1 115523947 4359357 2145118..2147100 1 NC_008435.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: rpc:RPC_1836 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 2147100 4359357 RPE_1934 Rhodopseudomonas palustris BisA53 cytochrome c-type biogenesis protein CcmF YP_780858.1 2145118 D 316055 CDS YP_780859.1 115523948 4359358 2147102..2147602 1 NC_008435.1 PFAM: cytochrome C biogenesis protein; KEGG: rpa:RPA1922 CycL cytochrome C-type biogenesis protein; cytochrome C biogenesis protein 2147602 4359358 RPE_1935 Rhodopseudomonas palustris BisA53 cytochrome C biogenesis protein YP_780859.1 2147102 D 316055 CDS YP_780860.1 115523949 4359359 complement(2147668..2148903) 1 NC_008435.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rpc:RPC_3502 cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K 2148903 4359359 RPE_1936 Rhodopseudomonas palustris BisA53 cobalamin synthesis protein, P47K YP_780860.1 2147668 R 316055 CDS YP_780861.1 115523950 4359360 complement(2149187..2149675) 1 NC_008435.1 KEGG: rpc:RPC_1839 hypothetical protein; hypothetical protein 2149675 4359360 RPE_1937 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780861.1 2149187 R 316055 CDS YP_780862.1 115523951 4359361 complement(2149807..2150715) 1 NC_008435.1 PFAM: ferredoxin; KEGG: rpc:RPC_1840 ferredoxin; ferredoxin 2150715 4359361 RPE_1938 Rhodopseudomonas palustris BisA53 ferredoxin YP_780862.1 2149807 R 316055 CDS YP_780863.1 115523952 4359362 2151043..2152629 1 NC_008435.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_1841 peptidase S1C, Do; protease Do 2152629 4359362 RPE_1939 Rhodopseudomonas palustris BisA53 protease Do YP_780863.1 2151043 D 316055 CDS YP_780864.1 115523953 4359363 2152893..2153570 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpb:RPB_3442 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2153570 4359363 RPE_1940 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_780864.1 2152893 D 316055 CDS YP_780865.1 115523954 4359364 2153909..2155615 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_1843 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2155615 4359364 RPE_1941 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780865.1 2153909 D 316055 CDS YP_780866.1 115523955 4359365 complement(2155685..2157061) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_1844 diguanylate cyclase (GGDEF domain); diguanylate cyclase 2157061 4359365 RPE_1942 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_780866.1 2155685 R 316055 CDS YP_780867.1 115523956 4359366 2157397..2158860 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_1845 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 2158860 4359366 RPE_1943 Rhodopseudomonas palustris BisA53 periplasmic sensor signal transduction histidine kinase YP_780867.1 2157397 D 316055 CDS YP_780868.1 115523957 4359367 2158857..2161823 1 NC_008435.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 2161823 4359367 RPE_1944 Rhodopseudomonas palustris BisA53 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_780868.1 2158857 D 316055 CDS YP_780869.1 115523958 4359368 complement(2161857..2162492) 1 NC_008435.1 PFAM: protein of unknown function DUF1109; KEGG: sme:SMb20532 hypothetical protein; hypothetical protein 2162492 4359368 RPE_1945 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780869.1 2161857 R 316055 CDS YP_780870.1 115523959 4359369 complement(2162482..2163036) 1 NC_008435.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2163036 4359369 RPE_1946 Rhodopseudomonas palustris BisA53 RNA polymerase sigma factor YP_780870.1 2162482 R 316055 CDS YP_780871.1 115523960 4359370 2163350..2163658 1 NC_008435.1 KEGG: sme:SMb20530 hypothetical protein; hypothetical protein 2163658 4359370 RPE_1947 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780871.1 2163350 D 316055 CDS YP_780872.1 115523961 4359371 2163703..2164623 1 NC_008435.1 PFAM: protein of unknown function DUF692; KEGG: sme:SMb20529 hypothetical protein; hypothetical protein 2164623 4359371 RPE_1948 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780872.1 2163703 D 316055 CDS YP_780873.1 115523962 4359372 2164613..2165416 1 NC_008435.1 KEGG: bps:BPSL1690 hypothetical protein; hypothetical protein 2165416 4359372 RPE_1949 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780873.1 2164613 D 316055 CDS YP_780874.1 115523963 4359373 2165413..2165937 1 NC_008435.1 PFAM: DoxX family protein; KEGG: sme:SMb20527 hypothetical protein; DoxX family protein 2165937 4359373 RPE_1950 Rhodopseudomonas palustris BisA53 DoxX family protein YP_780874.1 2165413 D 316055 CDS YP_780875.1 115523964 4359374 complement(2165944..2168259) 1 NC_008435.1 KEGG: rpc:RPC_1847 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 2168259 4359374 RPE_1951 Rhodopseudomonas palustris BisA53 multi-sensor signal transduction histidine kinase YP_780875.1 2165944 R 316055 CDS YP_780876.1 115523965 4359375 complement(2168488..2169870) 1 NC_008435.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rpd:RPD_2019 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2169870 4359375 RPE_1952 Rhodopseudomonas palustris BisA53 cation diffusion facilitator family transporter YP_780876.1 2168488 R 316055 CDS YP_780877.1 115523966 4359376 complement(2170134..2170919) 1 NC_008435.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpd:RPD_2022 5-carboxymethyl-2-hydroxymuconate delta-isomerase; fumarylacetoacetate (FAA) hydrolase 2170919 4359376 RPE_1953 Rhodopseudomonas palustris BisA53 fumarylacetoacetate (FAA) hydrolase YP_780877.1 2170134 R 316055 CDS YP_780878.1 115523967 4359377 complement(2171160..2172134) 1 NC_008435.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 2172134 4359377 RPE_1954 Rhodopseudomonas palustris BisA53 2-dehydropantoate 2-reductase YP_780878.1 2171160 R 316055 CDS YP_780879.1 115523968 4359378 complement(2172204..2173715) 1 NC_008435.1 PFAM: protein of unknown function DUF112, transmembrane; KEGG: rpc:RPC_1851 protein of unknown function DUF112, transmembrane; hypothetical protein 2173715 4359378 RPE_1955 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780879.1 2172204 R 316055 CDS YP_780880.1 115523969 4359379 complement(2174037..2174540) 1 NC_008435.1 KEGG: rpc:RPC_1852 hypothetical protein; hypothetical protein 2174540 4359379 RPE_1956 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780880.1 2174037 R 316055 CDS YP_780881.1 115523970 4359380 complement(2174635..2175657) 1 NC_008435.1 PFAM: Uncharacterized protein UPF0065; KEGG: rpb:RPB_3428 uncharacterized protein UPF0065; hypothetical protein 2175657 4359380 RPE_1957 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780881.1 2174635 R 316055 CDS YP_780882.1 115523971 4359381 complement(2176018..2177295) 1 NC_008435.1 catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; formyl-coenzyme A transferase 2177295 4359381 RPE_1958 Rhodopseudomonas palustris BisA53 formyl-coenzyme A transferase YP_780882.1 2176018 R 316055 CDS YP_780883.1 115523972 4359382 complement(2177452..2178147) 1 NC_008435.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: rpd:RPD_2028 GntR-like; GntR family transcriptional regulator 2178147 4359382 RPE_1959 Rhodopseudomonas palustris BisA53 GntR family transcriptional regulator YP_780883.1 2177452 R 316055 CDS YP_780884.1 115523973 4359383 2178745..2180610 1 NC_008435.1 PFAM: K+ potassium transporter; KEGG: rpc:RPC_1856 K+ potassium transporter; K+ potassium transporter 2180610 4359383 RPE_1960 Rhodopseudomonas palustris BisA53 K+ potassium transporter YP_780884.1 2178745 D 316055 CDS YP_780885.1 115523974 4359384 complement(2180659..2180931) 1 NC_008435.1 KEGG: rpc:RPC_4314 hypothetical protein; hypothetical protein 2180931 4359384 RPE_1961 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780885.1 2180659 R 316055 CDS YP_780886.1 115523975 4359385 complement(2180954..2181412) 1 NC_008435.1 KEGG: rpc:RPC_4313 hypothetical protein; hypothetical protein 2181412 4359385 RPE_1962 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780886.1 2180954 R 316055 CDS YP_780887.1 115523976 4359386 2181625..2181963 1 NC_008435.1 KEGG: rpc:RPC_4312 hypothetical protein; hypothetical protein 2181963 4359386 RPE_1963 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780887.1 2181625 D 316055 CDS YP_780888.1 115523977 4359387 2181992..2182651 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4311 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2182651 4359387 RPE_1964 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_780888.1 2181992 D 316055 CDS YP_780889.1 115523978 4359388 2182648..2184009 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_4310 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 2184009 4359388 RPE_1965 Rhodopseudomonas palustris BisA53 periplasmic sensor signal transduction histidine kinase YP_780889.1 2182648 D 316055 CDS YP_780890.1 115523979 4359389 complement(2184006..2184191) 1 NC_008435.1 KEGG: rpb:RPB_4310 hypothetical protein; hypothetical protein 2184191 4359389 RPE_1966 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780890.1 2184006 R 316055 CDS YP_780891.1 115523980 4359390 2184661..2184957 1 NC_008435.1 PFAM: histone family protein DNA-binding protein; KEGG: bja:blr4404 histone-like protein; histone family protein DNA-binding protein 2184957 4359390 RPE_1967 Rhodopseudomonas palustris BisA53 histone family protein DNA-binding protein YP_780891.1 2184661 D 316055 CDS YP_780892.1 115523981 4359391 complement(2185110..2185913) 1 NC_008435.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rpc:RPC_1949 cobalt ABC transporter CbiQ, permease subunit; cobalt ABC transporter inner membrane subunit CbiQ 2185913 4359391 RPE_1968 Rhodopseudomonas palustris BisA53 cobalt ABC transporter inner membrane subunit CbiQ YP_780892.1 2185110 R 316055 CDS YP_780893.1 115523982 4359392 complement(2185910..2186563) 1 NC_008435.1 KEGG: rpc:RPC_1950 hypothetical protein; hypothetical protein 2186563 4359392 RPE_1969 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780893.1 2185910 R 316055 CDS YP_780894.1 115523983 4359393 complement(2186560..2187195) 1 NC_008435.1 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 2187195 4359393 RPE_1970 Rhodopseudomonas palustris BisA53 cobalt transport protein CbiM YP_780894.1 2186560 R 316055 CDS YP_780895.1 115523984 4359394 complement(2187209..2187988) 1 NC_008435.1 KEGG: rpc:RPC_1952 ABC-type Co2+ transport system, periplasmic component; ABC-type Co2+ transport system, periplasmic component 2187988 4359394 RPE_1971 Rhodopseudomonas palustris BisA53 ABC-type Co2+ transport system, periplasmic component YP_780895.1 2187209 R 316055 CDS YP_780896.1 115523985 4359395 complement(2188097..2188600) 1 NC_008435.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 2188600 4359395 RPE_1972 Rhodopseudomonas palustris BisA53 nickel responsive regulator YP_780896.1 2188097 R 316055 CDS YP_780897.1 115523986 4359396 2188718..2189029 1 NC_008435.1 hypothetical protein 2189029 4359396 RPE_1973 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780897.1 2188718 D 316055 CDS YP_780898.1 115523987 4359397 2189022..2189741 1 NC_008435.1 KEGG: sme:SMa1198 possible copper export protein; putative copper export protein-like protein 2189741 4359397 RPE_1974 Rhodopseudomonas palustris BisA53 putative copper export protein-like protein YP_780898.1 2189022 D 316055 CDS YP_780899.1 115523988 4359398 complement(2189742..2190092) 1 NC_008435.1 KEGG: rpa:RPA2316 enoyl-CoA hydratase; enoyl-CoA hydratase/carnithine racemase-like protein 2190092 4359398 RPE_1975 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase/carnithine racemase-like protein YP_780899.1 2189742 R 316055 CDS YP_780900.1 115523989 4359399 2190272..2191270 1 NC_008435.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: rpc:RPC_2060 TIM-barrel protein, YjbN family; tRNA-dihydrouridine synthase A 2191270 4359399 RPE_1976 Rhodopseudomonas palustris BisA53 tRNA-dihydrouridine synthase A YP_780900.1 2190272 D 316055 CDS YP_780901.1 115523990 4359487 complement(2191281..2191793) 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_2062 hypothetical protein; hypothetical protein 2191793 4359487 RPE_1977 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780901.1 2191281 R 316055 CDS YP_780902.1 115523991 4359488 complement(2191845..2193482) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_2064 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase 2193482 4359488 RPE_1978 Rhodopseudomonas palustris BisA53 sensor signal transduction histidine kinase YP_780902.1 2191845 R 316055 CDS YP_780903.1 115523992 4359489 complement(2193695..2194564) 1 NC_008435.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rpa:RPA1973 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 2194564 4359489 RPE_1979 Rhodopseudomonas palustris BisA53 3-hydroxyisobutyrate dehydrogenase YP_780903.1 2193695 R 316055 CDS YP_780904.1 115523993 4359490 2194753..2195919 1 NC_008435.1 KEGG: rpb:RPB_3393 MRP-like protein (ATP/GTP-binding protein); MRP-like protein 2195919 4359490 RPE_1980 Rhodopseudomonas palustris BisA53 MRP-like protein YP_780904.1 2194753 D 316055 CDS YP_780905.1 115523994 4359491 2196113..2197201 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpc:RPC_2067 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 2197201 4359491 RPE_1981 Rhodopseudomonas palustris BisA53 twin-arginine translocation pathway signal YP_780905.1 2196113 D 316055 CDS YP_780906.1 115523995 4359492 complement(2197288..2199126) 1 NC_008435.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpc:RPC_2071 TRAP dicarboxylate transporter-DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 2199126 4359492 RPE_1982 Rhodopseudomonas palustris BisA53 TRAP C4-dicarboxylate transport system permease DctM YP_780906.1 2197288 R 316055 CDS YP_780907.1 115523996 4359493 complement(2199158..2199787) 1 NC_008435.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rpc:RPC_2072 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 2199787 4359493 RPE_1983 Rhodopseudomonas palustris BisA53 tripartite ATP-independent periplasmic transporter DctQ YP_780907.1 2199158 R 316055 CDS YP_780908.1 115523997 4359494 complement(2199915..2200946) 1 NC_008435.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 2200946 moaA 4359494 moaA Rhodopseudomonas palustris BisA53 molybdenum cofactor biosynthesis protein A YP_780908.1 2199915 R 316055 CDS YP_780909.1 115523998 4359495 complement(2201047..2201496) 1 NC_008435.1 KEGG: rpc:RPC_2074 hypothetical protein; hypothetical protein 2201496 4359495 RPE_1985 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780909.1 2201047 R 316055 CDS YP_780910.1 115523999 4359496 complement(2201647..2202333) 1 NC_008435.1 KEGG: rpc:RPC_2075 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase 2202333 4359496 RPE_1986 Rhodopseudomonas palustris BisA53 phosphoglycolate phosphatase YP_780910.1 2201647 R 316055 CDS YP_780911.1 115524000 4359497 2202492..2203217 1 NC_008435.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 2203217 4359497 RPE_1987 Rhodopseudomonas palustris BisA53 ribose-5-phosphate isomerase A YP_780911.1 2202492 D 316055 CDS YP_780912.1 115524001 4359498 2203214..2203735 1 NC_008435.1 KEGG: rpc:RPC_2077 hypothetical protein; hypothetical protein 2203735 4359498 RPE_1988 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780912.1 2203214 D 316055 CDS YP_780913.1 115524002 4359499 2203760..2205145 1 NC_008435.1 TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rpc:RPC_2078 glutathione reductase; glutathione reductase 2205145 4359499 RPE_1989 Rhodopseudomonas palustris BisA53 glutathione reductase YP_780913.1 2203760 D 316055 CDS YP_780914.1 115524003 4359500 complement(2205153..2206052) 1 NC_008435.1 KEGG: rpc:RPC_2079 hypothetical protein; hypothetical protein 2206052 4359500 RPE_1990 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780914.1 2205153 R 316055 CDS YP_780915.1 115524004 4359501 2206225..2207613 1 NC_008435.1 KEGG: rpc:RPC_2080 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase, class II; phospho-2-dehydro-3-deoxyheptonate aldolase 2207613 4359501 RPE_1991 Rhodopseudomonas palustris BisA53 phospho-2-dehydro-3-deoxyheptonate aldolase YP_780915.1 2206225 D 316055 CDS YP_780916.1 115524005 4359502 2207615..2207968 1 NC_008435.1 PFAM: diacylglycerol kinase; KEGG: rpc:RPC_2081 diacylglycerol kinase; diacylglycerol kinase 2207968 4359502 RPE_1992 Rhodopseudomonas palustris BisA53 diacylglycerol kinase YP_780916.1 2207615 D 316055 CDS YP_780917.1 115524006 4359503 2208003..2209766 1 NC_008435.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2209766 nadE 4359503 nadE Rhodopseudomonas palustris BisA53 NAD synthetase YP_780917.1 2208003 D 316055 CDS YP_780918.1 115524007 4359504 complement(2209796..2210206) 1 NC_008435.1 PFAM: PilT protein domain protein; KEGG: rpa:RPA1992 possible NtrR protein; PilT domain-containing protein 2210206 4359504 RPE_1994 Rhodopseudomonas palustris BisA53 PilT domain-containing protein YP_780918.1 2209796 R 316055 CDS YP_780919.1 115524008 4359505 complement(2210203..2210466) 1 NC_008435.1 PFAM: SpoVT/AbrB domain protein; KEGG: rpd:RPD_2062 SpoVT/AbrB-like; SpoVT/AbrB domain-containing protein 2210466 4359505 RPE_1995 Rhodopseudomonas palustris BisA53 SpoVT/AbrB domain-containing protein YP_780919.1 2210203 R 316055 CDS YP_780920.1 115524009 4359506 complement(2210591..2211733) 1 NC_008435.1 KEGG: rpc:RPC_2084 hypothetical protein; hypothetical protein 2211733 4359506 RPE_1996 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780920.1 2210591 R 316055 CDS YP_780921.1 115524010 4359507 complement(2211826..2212194) 1 NC_008435.1 KEGG: rpc:RPC_2085 hypothetical protein; hypothetical protein 2212194 4359507 RPE_1997 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780921.1 2211826 R 316055 CDS YP_780922.1 115524011 4359508 2212472..2213863 1 NC_008435.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2213863 cysS 4359508 cysS Rhodopseudomonas palustris BisA53 cysteinyl-tRNA synthetase YP_780922.1 2212472 D 316055 CDS YP_780923.1 115524012 4359509 2213860..2214156 1 NC_008435.1 KEGG: rpd:RPD_2066 hypothetical protein; hypothetical protein 2214156 4359509 RPE_1999 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780923.1 2213860 D 316055 CDS YP_780924.1 115524013 4359510 2214156..2214287 1 NC_008435.1 KEGG: rpa:RPA1998 hypothetical protein; hypothetical protein 2214287 4359510 RPE_2000 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780924.1 2214156 D 316055 CDS YP_780925.1 115524014 4359511 2214293..2214802 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_2088 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2214802 4359511 RPE_2001 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_780925.1 2214293 D 316055 CDS YP_780926.1 115524015 4359512 2214799..2216397 1 NC_008435.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rpc:RPC_2089 2-isopropylmalate synthase/homocitrate synthase; putative alpha-isopropylmalate/homocitrate synthase family transferase 2216397 4359512 RPE_2002 Rhodopseudomonas palustris BisA53 putative alpha-isopropylmalate/homocitrate synthase family transferase YP_780926.1 2214799 D 316055 CDS YP_780927.1 115524016 4359513 2216410..2216784 1 NC_008435.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr3793 putative lyase; glyoxalase/bleomycin resistance protein/dioxygenase 2216784 4359513 RPE_2003 Rhodopseudomonas palustris BisA53 glyoxalase/bleomycin resistance protein/dioxygenase YP_780927.1 2216410 D 316055 CDS YP_780928.1 115524017 4359514 2216988..2218544 1 NC_008435.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 2218544 4359514 RPE_2004 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780928.1 2216988 D 316055 CDS YP_780929.1 115524018 4359515 2218556..2219938 1 NC_008435.1 PFAM: FAD linked oxidase domain protein; KEGG: rpd:RPD_2071 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 2219938 4359515 RPE_2005 Rhodopseudomonas palustris BisA53 FAD linked oxidase domain-containing protein YP_780929.1 2218556 D 316055 CDS YP_780930.1 115524019 4359516 complement(2220112..2220738) 1 NC_008435.1 PFAM: conserved hypothetical protein 730; KEGG: rpc:RPC_2093 conserved hypothetical protein 730; hypothetical protein 2220738 4359516 RPE_2006 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780930.1 2220112 R 316055 CDS YP_780931.1 115524020 4359517 2220933..2222903 1 NC_008435.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_2094 ABC transporter related; ABC transporter-like protein 2222903 4359517 RPE_2007 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_780931.1 2220933 D 316055 CDS YP_780932.1 115524021 4359518 2222951..2223649 1 NC_008435.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 2223649 4359518 RPE_2008 Rhodopseudomonas palustris BisA53 phosphatidylserine decarboxylase YP_780932.1 2222951 D 316055 CDS YP_780933.1 115524022 4359519 2223746..2224624 1 NC_008435.1 KEGG: rpc:RPC_2096 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; outer membrane TOM13 domain protein; CDP-diacylglycerol--serine O-phosphatidyltransferase 2224624 4359519 RPE_2009 Rhodopseudomonas palustris BisA53 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_780933.1 2223746 D 316055 CDS YP_780934.1 115524023 4359520 2225019..2225792 1 NC_008435.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpc:RPC_2100 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 2225792 4359520 RPE_2010 Rhodopseudomonas palustris BisA53 MotA/TolQ/ExbB proton channel YP_780934.1 2225019 D 316055 CDS YP_780935.1 115524024 4359521 2225823..2226641 1 NC_008435.1 PFAM: OmpA/MotB domain protein; KEGG: rpc:RPC_2101 OmpA/MotB; OmpA/MotB domain-containing protein 2226641 4359521 RPE_2011 Rhodopseudomonas palustris BisA53 OmpA/MotB domain-containing protein YP_780935.1 2225823 D 316055 CDS YP_780936.1 115524025 4359522 2226805..2228697 1 NC_008435.1 PFAM: K+ potassium transporter; KEGG: rpc:RPC_2102 K+ potassium transporter; K+ potassium transporter 2228697 4359522 RPE_2012 Rhodopseudomonas palustris BisA53 K+ potassium transporter YP_780936.1 2226805 D 316055 CDS YP_780937.1 115524026 4359523 2228826..2229179 1 NC_008435.1 SMART: Rhodanese domain protein; KEGG: rpd:RPD_2080 rhodanese-like; rhodanese domain-containing protein 2229179 4359523 RPE_2013 Rhodopseudomonas palustris BisA53 rhodanese domain-containing protein YP_780937.1 2228826 D 316055 CDS YP_780938.1 115524027 4359524 2229187..2230341 1 NC_008435.1 PFAM: aminotransferase, class V; aminotransferase, class I and II; KEGG: rpc:RPC_2104 aminotransferase, class I and II; hypothetical protein 2230341 4359524 RPE_2014 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780938.1 2229187 D 316055 CDS YP_780939.1 115524028 4359525 2230379..2231491 1 NC_008435.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_2105 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2231491 4359525 RPE_2015 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_780939.1 2230379 D 316055 CDS YP_780940.1 115524029 4359526 2231488..2232012 1 NC_008435.1 hypothetical protein 2232012 4359526 RPE_2016 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780940.1 2231488 D 316055 CDS YP_780941.1 115524030 4359527 2232081..2232215 1 NC_008435.1 KEGG: rpa:RPA4003 hypothetical protein; hypothetical protein 2232215 4359527 RPE_2017 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780941.1 2232081 D 316055 CDS YP_780942.1 115524031 4359528 complement(2232297..2233229) 1 NC_008435.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2233229 4359528 RPE_2018 Rhodopseudomonas palustris BisA53 lipid A biosynthesis lauroyl acyltransferase YP_780942.1 2232297 R 316055 CDS YP_780943.1 115524032 4359529 complement(2233229..2234251) 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_2107 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 2234251 4359529 RPE_2019 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_780943.1 2233229 R 316055 CDS YP_780944.1 115524033 4359530 complement(2234285..2235565) 1 NC_008435.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-(acyl carrier protein) synthase II 2235565 4359530 RPE_2020 Rhodopseudomonas palustris BisA53 3-oxoacyl-(acyl carrier protein) synthase II YP_780944.1 2234285 R 316055 CDS YP_780945.1 115524034 4359531 complement(2235584..2236792) 1 NC_008435.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 2236792 4359531 RPE_2021 Rhodopseudomonas palustris BisA53 3-oxoacyl-(acyl carrier protein) synthase II YP_780945.1 2235584 R 316055 CDS YP_780946.1 115524035 4359532 complement(2236785..2237258) 1 NC_008435.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: rpc:RPC_2110 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 2237258 4359532 RPE_2022 Rhodopseudomonas palustris BisA53 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_780946.1 2236785 R 316055 CDS YP_780947.2 162134982 4359533 complement(2237269..2237550) 1 NC_008435.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 2237550 4359533 RPE_2023 Rhodopseudomonas palustris BisA53 acyl carrier protein YP_780947.2 2237269 R 316055 CDS YP_780948.1 115524037 4359534 complement(2237737..2238045) 1 NC_008435.1 KEGG: rpc:RPC_2112 hypothetical protein; hypothetical protein 2238045 4359534 RPE_2024 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780948.1 2237737 R 316055 CDS YP_780949.1 115524038 4359535 complement(2238145..2238666) 1 NC_008435.1 PFAM: MgtC/SapB transporter; KEGG: rpc:RPC_2114 MgtC/SapB transporter; MgtC/SapB transporter 2238666 4359535 RPE_2025 Rhodopseudomonas palustris BisA53 MgtC/SapB transporter YP_780949.1 2238145 R 316055 CDS YP_780950.1 115524039 4359536 complement(2238663..2239241) 1 NC_008435.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rpc:RPC_2115 uncharacterised peroxidase-related; peroxidase-like protein 2239241 4359536 RPE_2026 Rhodopseudomonas palustris BisA53 peroxidase-like protein YP_780950.1 2238663 R 316055 CDS YP_780951.1 115524040 4359537 complement(2239336..2241087) 1 NC_008435.1 PFAM: protein of unknown function DUF87; KEGG: rpc:RPC_2116 protein of unknown function DUF87; hypothetical protein 2241087 4359537 RPE_2027 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780951.1 2239336 R 316055 CDS YP_780952.1 115524041 4359538 2241467..2242399 1 NC_008435.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rpb:RPB_1903 gluconolactonase precursor; SMP-30/gluconolaconase/LRE domain-containing protein 2242399 4359538 RPE_2028 Rhodopseudomonas palustris BisA53 SMP-30/gluconolaconase/LRE domain-containing protein YP_780952.1 2241467 D 316055 CDS YP_780953.1 115524042 4359539 2242594..2243187 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpb:RPB_1904 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2243187 4359539 RPE_2029 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_780953.1 2242594 D 316055 CDS YP_780954.1 115524043 4359400 2243314..2243598 1 NC_008435.1 KEGG: rpa:RPA3622 hypothetical protein; hypothetical protein 2243598 4359400 RPE_2030 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780954.1 2243314 D 316055 CDS YP_780955.1 115524044 4359401 complement(2243756..2244598) 1 NC_008435.1 PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_2122 ATPase associated with various cellular activities, AAA_5; ATPase 2244598 4359401 RPE_2031 Rhodopseudomonas palustris BisA53 ATPase YP_780955.1 2243756 R 316055 CDS YP_780956.1 115524045 4359402 complement(2244794..2246719) 1 NC_008435.1 KEGG: rpd:RPD_3460 GGDEF domain; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase 2246719 4359402 RPE_2032 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_780956.1 2244794 R 316055 CDS YP_780957.1 115524046 4359403 2247110..2248285 1 NC_008435.1 KEGG: rpb:RPB_1913 hypothetical protein; hypothetical protein 2248285 4359403 RPE_2033 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780957.1 2247110 D 316055 CDS YP_780958.1 115524047 4359404 2248425..2248886 1 NC_008435.1 SMART: Rhodanese domain protein; KEGG: rpd:RPD_3458 rhodanese-like; rhodanese domain-containing protein 2248886 4359404 RPE_2034 Rhodopseudomonas palustris BisA53 rhodanese domain-containing protein YP_780958.1 2248425 D 316055 CDS YP_780959.1 115524048 4359405 2249000..2249857 1 NC_008435.1 PFAM: Rhodanese domain protein; KEGG: rpa:RPA3613 putative thiosulfate sulfurtransferase; 3-mercaptopyruvate sulfurtransferase 2249857 4359405 RPE_2035 Rhodopseudomonas palustris BisA53 3-mercaptopyruvate sulfurtransferase YP_780959.1 2249000 D 316055 CDS YP_780960.1 115524049 4359406 complement(2249864..2250658) 1 NC_008435.1 KEGG: rpa:RPA3612 hypothetical protein; hypothetical protein 2250658 4359406 RPE_2036 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780960.1 2249864 R 316055 CDS YP_780961.1 115524050 4359407 2251003..2252277 1 NC_008435.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_2129 ErfK/YbiS/YcfS/YnhG; hypothetical protein 2252277 4359407 RPE_2037 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780961.1 2251003 D 316055 CDS YP_780962.1 115524051 4359408 complement(2252331..2252534) 1 NC_008435.1 KEGG: rpc:RPC_2130 hypothetical protein; hypothetical protein 2252534 4359408 RPE_2038 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780962.1 2252331 R 316055 CDS YP_780963.1 115524052 4359409 2252778..2254427 1 NC_008435.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 2254427 4359409 RPE_2039 Rhodopseudomonas palustris BisA53 putative ABC transporter ATP-binding protein YP_780963.1 2252778 D 316055 CDS YP_780964.1 115524053 4359410 complement(2254443..2254658) 1 NC_008435.1 KEGG: rpc:RPC_2132 PilT protein-like; hypothetical protein 2254658 4359410 RPE_2040 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780964.1 2254443 R 316055 CDS YP_780965.1 115524054 4359411 complement(2254717..2254974) 1 NC_008435.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: rpc:RPC_2133 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 2254974 4359411 RPE_2041 Rhodopseudomonas palustris BisA53 AbrB family transcriptional regulator YP_780965.1 2254717 R 316055 CDS YP_780966.1 115524055 4359412 complement(2255046..2255303) 1 NC_008435.1 KEGG: nwi:Nwi_2484 hypothetical protein; hypothetical protein 2255303 4359412 RPE_2042 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780966.1 2255046 R 316055 CDS YP_780967.1 115524056 4359413 complement(2255290..2255589) 1 NC_008435.1 PFAM: protein of unknown function DUF497; KEGG: rpc:RPC_2135 protein of unknown function DUF497; hypothetical protein 2255589 4359413 RPE_2043 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780967.1 2255290 R 316055 CDS YP_780968.1 115524057 4359414 2255688..2256458 1 NC_008435.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 2256458 4359414 RPE_2044 Rhodopseudomonas palustris BisA53 trans-aconitate 2-methyltransferase YP_780968.1 2255688 D 316055 CDS YP_780969.1 115524058 4359415 2256575..2257165 1 NC_008435.1 PFAM: Uncharacterized protein UPF0114; KEGG: rpc:RPC_2137 uncharacterized protein UPF0114; hypothetical protein 2257165 4359415 RPE_2045 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780969.1 2256575 D 316055 CDS YP_780970.1 115524059 4359416 2257225..2257425 1 NC_008435.1 KEGG: rpc:RPC_2138 hypothetical protein; hypothetical protein 2257425 4359416 RPE_2046 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780970.1 2257225 D 316055 CDS YP_780971.1 115524060 4359417 2257422..2258666 1 NC_008435.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_2140 lytic murein transglycosylase; lytic murein transglycosylase 2258666 4359417 RPE_2047 Rhodopseudomonas palustris BisA53 lytic murein transglycosylase YP_780971.1 2257422 D 316055 CDS YP_780972.1 115524061 4359418 complement(2258675..2259493) 1 NC_008435.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1925 phosphonate uptake transporter; phosphonate ABC transporter inner membrane subunit 2259493 4359418 RPE_2048 Rhodopseudomonas palustris BisA53 phosphonate ABC transporter inner membrane subunit YP_780972.1 2258675 R 316055 CDS YP_780973.1 115524062 4359419 complement(2259495..2260304) 1 NC_008435.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1926 phosphonate uptake transporter; phosphonate ABC transporter inner membrane subunit 2260304 4359419 RPE_2049 Rhodopseudomonas palustris BisA53 phosphonate ABC transporter inner membrane subunit YP_780973.1 2259495 R 316055 CDS YP_780974.1 115524063 4359420 complement(2260304..2261143) 1 NC_008435.1 KEGG: rpb:RPB_1927 phosphonate ABC transporter PhnC, ATP-binding; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATPase 2261143 4359420 RPE_2050 Rhodopseudomonas palustris BisA53 phosphonate ABC transporter ATPase YP_780974.1 2260304 R 316055 CDS YP_780975.1 115524064 4359421 complement(2261235..2262230) 1 NC_008435.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rpb:RPB_1928 phosphonate-binding periplasmic protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 2262230 4359421 RPE_2051 Rhodopseudomonas palustris BisA53 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_780975.1 2261235 R 316055 CDS YP_780976.1 115524065 4359422 complement(2262504..2262791) 1 NC_008435.1 KEGG: rpd:RPD_3448 hypothetical protein; hypothetical protein 2262791 4359422 RPE_2052 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780976.1 2262504 R 316055 CDS YP_780977.1 115524066 4359423 complement(2263004..2263309) 1 NC_008435.1 KEGG: rpc:RPC_2142 hypothetical protein; hypothetical protein 2263309 4359423 RPE_2053 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780977.1 2263004 R 316055 CDS YP_780978.1 115524067 4359424 2263912..2264310 1 NC_008435.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rpc:RPC_2143 BFD-like (2Fe-2S)-binding region; BFD/(2Fe-2S)-binding domain-containing protein 2264310 4359424 RPE_2054 Rhodopseudomonas palustris BisA53 BFD/(2Fe-2S)-binding domain-containing protein YP_780978.1 2263912 D 316055 CDS YP_780979.1 115524068 4359425 2264516..2264995 1 NC_008435.1 TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: rpc:RPC_2144 bacterioferritin; bacterioferritin 2264995 4359425 RPE_2055 Rhodopseudomonas palustris BisA53 bacterioferritin YP_780979.1 2264516 D 316055 CDS YP_780980.1 115524069 4359426 complement(2265105..2267132) 1 NC_008435.1 PFAM: chemotaxis sensory transducer; KEGG: rpc:RPC_2149 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2267132 4359426 RPE_2056 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_780980.1 2265105 R 316055 CDS YP_780981.1 115524070 4359427 complement(2267371..2267847) 1 NC_008435.1 KEGG: rpc:RPC_2150 membrane protein-like; hypothetical protein 2267847 4359427 RPE_2057 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780981.1 2267371 R 316055 CDS YP_780982.1 115524071 4359428 complement(2268005..2269129) 1 NC_008435.1 KEGG: rpc:RPC_2153 hypothetical protein; hypothetical protein 2269129 4359428 RPE_2058 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780982.1 2268005 R 316055 CDS YP_780983.1 115524072 4359429 2269501..2269806 1 NC_008435.1 KEGG: rpc:RPC_2154 hypothetical protein; hypothetical protein 2269806 4359429 RPE_2059 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780983.1 2269501 D 316055 CDS YP_780984.1 115524073 4359430 2270523..2271008 1 NC_008435.1 KEGG: bja:bll5279 hypothetical protein; hypothetical protein 2271008 4359430 RPE_2060 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780984.1 2270523 D 316055 CDS YP_780985.1 115524074 4359431 2271260..2271490 1 NC_008435.1 KEGG: rpd:RPD_3434 hypothetical protein; hypothetical protein 2271490 4359431 RPE_2061 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780985.1 2271260 D 316055 CDS YP_780986.1 115524075 4359432 2271815..2273338 1 NC_008435.1 TIGRFAM: diguanylate cyclase; hemerythrin-like metal-binding protein; PFAM: GGDEF domain containing protein; Hemerythrin HHE cation binding domain protein; KEGG: rpa:RPA1642 putative diguanylate cyclase (GGDEF); diguanylate cyclase 2273338 4359432 RPE_2062 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_780986.1 2271815 D 316055 CDS YP_780987.1 115524076 4359433 complement(2273603..2274232) 1 NC_008435.1 KEGG: rpc:RPC_2159 hypothetical protein; hypothetical protein 2274232 4359433 RPE_2063 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780987.1 2273603 R 316055 CDS YP_780988.1 115524077 4359434 complement(2274420..2274632) 1 NC_008435.1 KEGG: noc:Noc_1857 hypothetical protein; hypothetical protein 2274632 4359434 RPE_2064 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780988.1 2274420 R 316055 CDS YP_780989.1 115524078 4359435 2275184..2275696 1 NC_008435.1 KEGG: rpb:RPB_1951 hypothetical protein; hypothetical protein 2275696 4359435 RPE_2065 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780989.1 2275184 D 316055 CDS YP_780990.1 115524079 4359436 2275851..2276417 1 NC_008435.1 PFAM: protein of unknown function DUF1568; KEGG: rpb:RPB_1952 protein of unknown function DUF1568; hypothetical protein 2276417 4359436 RPE_2066 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780990.1 2275851 D 316055 CDS YP_780991.1 115524080 4359437 complement(2276532..2276870) 1 NC_008435.1 hypothetical protein 2276870 4359437 RPE_2067 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780991.1 2276532 R 316055 CDS YP_780992.1 115524081 4359438 complement(2277016..2277678) 1 NC_008435.1 hypothetical protein 2277678 4359438 RPE_2068 Rhodopseudomonas palustris BisA53 hypothetical protein YP_780992.1 2277016 R 316055 CDS YP_780993.1 115524082 4359439 complement(2277789..2279714) 1 NC_008435.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2279714 4359439 RPE_2069 Rhodopseudomonas palustris BisA53 thiamine biosynthesis protein ThiC YP_780993.1 2277789 R 316055 CDS YP_780994.1 115524083 4359440 complement(2279954..2280562) 1 NC_008435.1 PFAM: thiamine monophosphate synthase; KEGG: rpb:RPB_1955 thiamine-phosphate pyrophosphorylase; thiamine-phosphate pyrophosphorylase 2280562 4359440 RPE_2070 Rhodopseudomonas palustris BisA53 thiamine-phosphate pyrophosphorylase YP_780994.1 2279954 R 316055 CDS YP_780995.1 115524084 4359441 complement(2280549..2281331) 1 NC_008435.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 2281331 thiG 4359441 thiG Rhodopseudomonas palustris BisA53 thiazole synthase YP_780995.1 2280549 R 316055 CDS YP_780996.1 115524085 4359442 complement(2281593..2281790) 1 NC_008435.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: rpb:RPB_1957 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 2281790 4359442 RPE_2072 Rhodopseudomonas palustris BisA53 thiamine biosynthesis protein ThiS YP_780996.1 2281593 R 316055 CDS YP_780997.1 115524086 4359443 complement(2281781..2282857) 1 NC_008435.1 PFAM: FAD dependent oxidoreductase; KEGG: rpd:RPD_3428 glycine oxidase ThiO; glycine oxidase ThiO 2282857 4359443 RPE_2073 Rhodopseudomonas palustris BisA53 glycine oxidase ThiO YP_780997.1 2281781 R 316055 CDS YP_780998.1 115524087 4359444 2283120..2283719 1 NC_008435.1 PFAM: PRC-barrel domain protein; KEGG: rpc:RPC_2167 PRC-barrel; PRC-barrel domain-containing protein 2283719 4359444 RPE_2074 Rhodopseudomonas palustris BisA53 PRC-barrel domain-containing protein YP_780998.1 2283120 D 316055 CDS YP_780999.1 115524088 4359445 2283891..2285228 1 NC_008435.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_2168 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2285228 4359445 RPE_2075 Rhodopseudomonas palustris BisA53 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_780999.1 2283891 D 316055 CDS YP_781000.1 115524089 4359446 complement(2285445..2286986) 1 NC_008435.1 KEGG: rpc:RPC_2169 hypothetical protein; hypothetical protein 2286986 4359446 RPE_2076 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781000.1 2285445 R 316055 CDS YP_781001.1 115524090 4359447 complement(2287161..2287688) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_2170 twin-arginine translocation pathway signal; hypothetical protein 2287688 4359447 RPE_2077 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781001.1 2287161 R 316055 CDS YP_781002.1 115524091 4359448 complement(2287739..2288461) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpd:RPD_3424 ErfK/YbiS/YcfS/YnhG; hypothetical protein 2288461 4359448 RPE_2078 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781002.1 2287739 R 316055 CDS YP_781003.1 115524092 4359449 2288714..2289025 1 NC_008435.1 KEGG: rpc:RPC_2174 hypothetical protein; hypothetical protein 2289025 4359449 RPE_2079 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781003.1 2288714 D 316055 CDS YP_781004.1 115524093 4359450 complement(2289072..2290541) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bja:bll5570 hypothetical protein; amidohydrolase 2290541 4359450 RPE_2080 Rhodopseudomonas palustris BisA53 amidohydrolase YP_781004.1 2289072 R 316055 CDS YP_781005.1 115524094 4359451 complement(2290634..2291527) 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_4895 transcriptional regulator, LysR family; LysR family transcriptional regulator 2291527 4359451 RPE_2081 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_781005.1 2290634 R 316055 CDS YP_781006.1 115524095 4358399 2291642..2292637 1 NC_008435.1 PFAM: aldo/keto reductase; KEGG: rpc:RPC_4894 aldo/keto reductase; aldo/keto reductase 2292637 4358399 RPE_2082 Rhodopseudomonas palustris BisA53 aldo/keto reductase YP_781006.1 2291642 D 316055 CDS YP_781007.1 115524096 4358400 2292674..2293729 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_4893 alcohol dehydrogenase GroES-like; alcohol dehydrogenase 2293729 4358400 RPE_2083 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_781007.1 2292674 D 316055 CDS YP_781008.1 115524097 4358401 2293781..2294284 1 NC_008435.1 PFAM: regulatory protein, MarR; KEGG: rpc:RPC_2962 transcriptional regulator, MarR family; MarR family transcriptional regulator 2294284 4358401 RPE_2084 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_781008.1 2293781 D 316055 CDS YP_781009.1 115524098 4358402 2294281..2294727 1 NC_008435.1 KEGG: rpd:RPD_3089 hypothetical protein; hypothetical protein 2294727 4358402 RPE_2085 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781009.1 2294281 D 316055 CDS YP_781010.1 115524099 4358403 2295089..2297875 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: bja:blr4813 hypothetical protein; diguanylate cyclase/phosphodiesterase 2297875 4358403 RPE_2086 Rhodopseudomonas palustris BisA53 diguanylate cyclase/phosphodiesterase YP_781010.1 2295089 D 316055 CDS YP_781011.1 115524100 4358404 complement(2297919..2298311) 1 NC_008435.1 KEGG: rpb:RPB_2455 hypothetical protein; hypothetical protein 2298311 4358404 RPE_2087 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781011.1 2297919 R 316055 CDS YP_781012.1 115524101 4358405 2298633..2298968 1 NC_008435.1 KEGG: rpb:RPB_3274 hypothetical protein; hypothetical protein 2298968 4358405 RPE_2088 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781012.1 2298633 D 316055 CDS YP_781013.1 115524102 4358406 complement(2299013..2299267) 1 NC_008435.1 KEGG: rpc:RPC_2177 hypothetical protein; hypothetical protein 2299267 4358406 RPE_2089 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781013.1 2299013 R 316055 CDS YP_781014.1 115524103 4358407 2299430..2300623 1 NC_008435.1 PFAM: Extensin family protein; KEGG: rpc:RPC_2178 extensin-like; extensin family protein 2300623 4358407 RPE_2090 Rhodopseudomonas palustris BisA53 extensin family protein YP_781014.1 2299430 D 316055 CDS YP_781015.1 115524104 4358408 complement(2300624..2301259) 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpa:RPA3544 transcriptional regulator, TetR family; TetR family transcriptional regulator 2301259 4358408 RPE_2091 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_781015.1 2300624 R 316055 CDS YP_781016.1 115524105 4358409 2301414..2302619 1 NC_008435.1 PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_2180 secretion protein HlyD; secretion protein HlyD family protein 2302619 4358409 RPE_2092 Rhodopseudomonas palustris BisA53 secretion protein HlyD family protein YP_781016.1 2301414 D 316055 CDS YP_781017.1 115524106 4358410 2302649..2304247 1 NC_008435.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_2181 drug resistance transporter EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 2304247 4358410 RPE_2093 Rhodopseudomonas palustris BisA53 EmrB/QacA family drug resistance transporter YP_781017.1 2302649 D 316055 CDS YP_781018.1 115524107 4358411 2304438..2304818 1 NC_008435.1 hypothetical protein 2304818 4358411 RPE_2094 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781018.1 2304438 D 316055 CDS YP_781019.1 115524108 4358412 2304898..2307204 1 NC_008435.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpc:RPC_4299 TonB-dependent receptor; TonB-dependent receptor 2307204 4358412 RPE_2095 Rhodopseudomonas palustris BisA53 TonB-dependent receptor YP_781019.1 2304898 D 316055 CDS YP_781020.1 115524109 4358413 complement(2307576..2308646) 1 NC_008435.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bja:bll2645 hypothetical protein; type 12 methyltransferase 2308646 4358413 RPE_2096 Rhodopseudomonas palustris BisA53 type 12 methyltransferase YP_781020.1 2307576 R 316055 CDS YP_781021.1 115524110 4358414 2308798..2309832 1 NC_008435.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: ade:Adeh_2267 transcriptional regulator, AraC family; AraC family transcriptional regulator 2309832 4358414 RPE_2097 Rhodopseudomonas palustris BisA53 AraC family transcriptional regulator YP_781021.1 2308798 D 316055 CDS YP_781022.1 115524111 4358416 complement(2310450..2311334) 1 NC_008435.1 PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: rpc:RPC_2185 negative regulator of AmpC, AmpD; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 2311334 4358416 RPE_2098 Rhodopseudomonas palustris BisA53 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_781022.1 2310450 R 316055 CDS YP_781023.1 115524112 4358417 2311692..2312894 1 NC_008435.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rpc:RPC_2186 methyltransferase; S-adenosyl-methyltransferase MraW 2312894 mraW 4358417 mraW Rhodopseudomonas palustris BisA53 S-adenosyl-methyltransferase MraW YP_781023.1 2311692 D 316055 CDS YP_781024.1 115524113 4358418 2312897..2313277 1 NC_008435.1 KEGG: rpc:RPC_2187 hypothetical protein; hypothetical protein 2313277 4358418 RPE_2100 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781024.1 2312897 D 316055 CDS YP_781025.1 115524114 4358419 2313274..2315028 1 NC_008435.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: rpc:RPC_2188 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 2315028 4358419 RPE_2101 Rhodopseudomonas palustris BisA53 peptidoglycan glycosyltransferase YP_781025.1 2313274 D 316055 CDS YP_781026.1 115524115 4358420 2315175..2316632 1 NC_008435.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2316632 murE 4358420 murE Rhodopseudomonas palustris BisA53 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_781026.1 2315175 D 316055 CDS YP_781027.1 115524116 4358421 2316629..2318071 1 NC_008435.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: rpc:RPC_2190 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase 2318071 4358421 RPE_2103 Rhodopseudomonas palustris BisA53 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase YP_781027.1 2316629 D 316055 CDS YP_781028.1 115524117 4358422 2318082..2319164 1 NC_008435.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 2319164 mraY 4358422 mraY Rhodopseudomonas palustris BisA53 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_781028.1 2318082 D 316055 CDS YP_781029.1 115524118 4358423 2319316..2320764 1 NC_008435.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 2320764 murD 4358423 murD Rhodopseudomonas palustris BisA53 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_781029.1 2319316 D 316055 CDS YP_781030.1 115524119 4358424 2321152..2322303 1 NC_008435.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: rpc:RPC_3307 cell cycle protein; cell division protein FtsW 2322303 4358424 RPE_2106 Rhodopseudomonas palustris BisA53 cell division protein FtsW YP_781030.1 2321152 D 316055 CDS YP_781031.1 115524120 4358425 2322347..2323471 1 NC_008435.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 2323471 murG 4358425 murG Rhodopseudomonas palustris BisA53 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_781031.1 2322347 D 316055 CDS YP_781032.1 115524121 4358426 2323638..2325041 1 NC_008435.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 2325041 murC 4358426 murC Rhodopseudomonas palustris BisA53 UDP-N-acetylmuramate--L-alanine ligase YP_781032.1 2323638 D 316055 CDS YP_781033.1 115524122 4358427 complement(2325209..2325499) 1 NC_008435.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: nwi:Nwi_1053 excinuclease ABC, C subunit; excinuclease ABC subunit C 2325499 4358427 RPE_2109 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_781033.1 2325209 R 316055 CDS YP_781034.1 115524123 4358428 2325631..2326596 1 NC_008435.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 2326596 murB 4358428 murB Rhodopseudomonas palustris BisA53 UDP-N-acetylenolpyruvoylglucosamine reductase YP_781034.1 2325631 D 316055 CDS YP_781035.1 115524124 4358429 complement(2326615..2327439) 1 NC_008435.1 KEGG: rpb:RPB_1999 hypothetical protein; hypothetical protein 2327439 4358429 RPE_2111 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781035.1 2326615 R 316055 CDS YP_781036.1 115524125 4358430 complement(2327560..2328741) 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: rpc:RPC_3302 glycosyl transferase, group 1; group 1 glycosyl transferase 2328741 4358430 RPE_2112 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_781036.1 2327560 R 316055 CDS YP_781037.1 115524126 4358431 2328865..2329791 1 NC_008435.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 2329791 ddl 4358431 ddl Rhodopseudomonas palustris BisA53 D-alanine--D-alanine ligase YP_781037.1 2328865 D 316055 CDS YP_781038.1 115524127 4358432 2329794..2330735 1 NC_008435.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: rpc:RPC_3300 cell division protein FtsQ; polypeptide-transport-associated domain-containing protein 2330735 4358432 RPE_2114 Rhodopseudomonas palustris BisA53 polypeptide-transport-associated domain-containing protein YP_781038.1 2329794 D 316055 CDS YP_781039.1 115524128 4358433 2330732..2332060 1 NC_008435.1 PFAM: cell division protein FtsA; KEGG: rpc:RPC_3299 cell division protein FtsA; cell division protein FtsA 2332060 4358433 RPE_2115 Rhodopseudomonas palustris BisA53 cell division protein FtsA YP_781039.1 2330732 D 316055 CDS YP_781040.1 115524129 4358434 2332154..2333950 1 NC_008435.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 2333950 4358434 RPE_2116 Rhodopseudomonas palustris BisA53 cell division protein FtsZ YP_781040.1 2332154 D 316055 CDS YP_781041.1 115524130 4358435 2334295..2335254 1 NC_008435.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2335254 lpxC 4358435 lpxC Rhodopseudomonas palustris BisA53 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_781041.1 2334295 D 316055 CDS YP_781042.1 115524131 4358436 2335517..2336422 1 NC_008435.1 KEGG: rpc:RPC_3296 putative lipoprotein; putative lipoprotein 2336422 4358436 RPE_2118 Rhodopseudomonas palustris BisA53 putative lipoprotein YP_781042.1 2335517 D 316055 CDS YP_781043.1 115524132 4358437 2336435..2338117 1 NC_008435.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rpc:RPC_3295 DNA repair protein RecN; DNA repair protein RecN 2338117 4358437 RPE_2119 Rhodopseudomonas palustris BisA53 DNA repair protein RecN YP_781043.1 2336435 D 316055 CDS YP_781044.1 115524133 4358438 complement(2338266..2338553) 1 NC_008435.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpd:RPD_3382 excinuclease ABC, C subunit-like; excinuclease ABC subunit C 2338553 4358438 RPE_2120 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_781044.1 2338266 R 316055 CDS YP_781045.1 115524134 4358439 2338594..2340786 1 NC_008435.1 KEGG: rpb:RPB_2008 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase 2340786 4358439 RPE_2121 Rhodopseudomonas palustris BisA53 NAD-dependent DNA ligase YP_781045.1 2338594 D 316055 CDS YP_781046.1 115524135 4358440 complement(2340942..2342231) 1 NC_008435.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3292 drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 2342231 4358440 RPE_2122 Rhodopseudomonas palustris BisA53 Bcr/CflA subfamily drug resistance transporter YP_781046.1 2340942 R 316055 CDS YP_781047.1 115524136 4358441 complement(2342401..2344230) 1 NC_008435.1 PFAM: peptidase M24; KEGG: rpc:RPC_3291 peptidase M24; peptidase M24 2344230 4358441 RPE_2123 Rhodopseudomonas palustris BisA53 peptidase M24 YP_781047.1 2342401 R 316055 CDS YP_781048.1 115524137 4358442 2344269..2344601 1 NC_008435.1 KEGG: rpd:RPD_3378 hypothetical protein; hypothetical protein 2344601 4358442 RPE_2124 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781048.1 2344269 D 316055 CDS YP_781049.1 115524138 4358443 complement(2344630..2345514) 1 NC_008435.1 PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: rpc:RPC_3290 ribosomal L11 methyltransferase; ribosomal L11 methyltransferase 2345514 4358443 RPE_2125 Rhodopseudomonas palustris BisA53 ribosomal L11 methyltransferase YP_781049.1 2344630 R 316055 CDS YP_781050.1 115524139 4358444 2346035..2346631 1 NC_008435.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: rpc:RPC_3396 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 2346631 4358444 RPE_2126 Rhodopseudomonas palustris BisA53 filamentation induced by cAMP protein fic YP_781050.1 2346035 D 316055 CDS YP_781051.1 115524140 4358445 complement(2346751..2348361) 1 NC_008435.1 PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_3288 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2348361 4358445 RPE_2127 Rhodopseudomonas palustris BisA53 FAD dependent oxidoreductase YP_781051.1 2346751 R 316055 CDS YP_781052.1 115524141 4358446 2348537..2350816 1 NC_008435.1 KEGG: rpc:RPC_3287 hypothetical protein; hypothetical protein 2350816 4358446 RPE_2128 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781052.1 2348537 D 316055 CDS YP_781053.1 115524142 4358447 complement(2350959..2351735) 1 NC_008435.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_3286 ErfK/YbiS/YcfS/YnhG; hypothetical protein 2351735 4358447 RPE_2129 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781053.1 2350959 R 316055 CDS YP_781054.1 115524143 4358448 2351987..2352328 1 NC_008435.1 KEGG: rpc:RPC_3285 hypothetical protein; hypothetical protein 2352328 4358448 RPE_2130 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781054.1 2351987 D 316055 CDS YP_781055.1 115524144 4358449 complement(2352393..2353154) 1 NC_008435.1 PFAM: ABC-2 type transporter; KEGG: rpc:RPC_3284 ABC-2; hypothetical protein 2353154 4358449 RPE_2131 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781055.1 2352393 R 316055 CDS YP_781056.1 115524145 4358450 complement(2353156..2354133) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_3283 ABC transporter related; ABC transporter-like protein 2354133 4358450 RPE_2132 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_781056.1 2353156 R 316055 CDS YP_781057.1 115524146 4358242 2354170..2354793 1 NC_008435.1 KEGG: rpc:RPC_3282 hypothetical protein; hypothetical protein 2354793 4358242 RPE_2133 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781057.1 2354170 D 316055 CDS YP_781058.1 115524147 4358243 complement(2354823..2355107) 1 NC_008435.1 PFAM: protein of unknown function UPF0150; KEGG: rpc:RPC_3281 protein of unknown function UPF0150; hypothetical protein 2355107 4358243 RPE_2134 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781058.1 2354823 R 316055 CDS YP_781059.1 115524148 4358244 complement(2355148..2355441) 1 NC_008435.1 PFAM: protein of unknown function UPF0150; KEGG: rpc:RPC_3280 protein of unknown function UPF0150; hypothetical protein 2355441 4358244 RPE_2135 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781059.1 2355148 R 316055 CDS YP_781060.1 115524149 4358245 complement(2355450..2355644) 1 NC_008435.1 PFAM: YcfA family protein; KEGG: rpb:RPB_2021 YcfA-like; hypothetical protein 2355644 4358245 RPE_2136 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781060.1 2355450 R 316055 CDS YP_781061.1 115524150 4358246 complement(2355702..2358242) 1 NC_008435.1 PFAM: UvrD/REP helicase; KEGG: rpb:RPB_2023 UvrD/REP helicase; UvrD/REP helicase 2358242 4358246 RPE_2137 Rhodopseudomonas palustris BisA53 UvrD/REP helicase YP_781061.1 2355702 R 316055 CDS YP_781062.1 115524151 4358247 2358526..2358699 1 NC_008435.1 PFAM: protein of unknown function DUF1328; KEGG: bja:bsl6560 hypothetical protein; hypothetical protein 2358699 4358247 RPE_2138 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781062.1 2358526 D 316055 CDS YP_781063.1 115524152 4358248 complement(2358707..2359231) 1 NC_008435.1 KEGG: rpc:RPC_3277 hypothetical protein; hypothetical protein 2359231 4358248 RPE_2139 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781063.1 2358707 R 316055 CDS YP_781064.1 115524153 4358249 2359337..2360755 1 NC_008435.1 PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_3276 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 2360755 4358249 RPE_2140 Rhodopseudomonas palustris BisA53 FAD linked oxidase domain-containing protein YP_781064.1 2359337 D 316055 CDS YP_781065.1 115524154 4358250 2360988..2364554 1 NC_008435.1 PFAM: AsmA family protein; KEGG: rpc:RPC_3274 AsmA; hypothetical protein 2364554 4358250 RPE_2141 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781065.1 2360988 D 316055 CDS YP_781066.1 115524155 4358251 complement(2364659..2364922) 1 NC_008435.1 KEGG: rpc:RPC_3273 hypothetical protein; hypothetical protein 2364922 4358251 RPE_2142 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781066.1 2364659 R 316055 CDS YP_781067.1 115524156 4358252 complement(2364919..2365104) 1 NC_008435.1 KEGG: rpc:RPC_3272 hypothetical protein; hypothetical protein 2365104 4358252 RPE_2143 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781067.1 2364919 R 316055 CDS YP_781068.1 115524157 4358253 complement(2365370..2366794) 1 NC_008435.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2366794 fumC 4358253 fumC Rhodopseudomonas palustris BisA53 fumarate hydratase YP_781068.1 2365370 R 316055 CDS YP_781069.1 115524158 4358254 complement(2366867..2367376) 1 NC_008435.1 PFAM: protein of unknown function DUF1321; KEGG: rpc:RPC_3270 protein of unknown function DUF1321; hypothetical protein 2367376 4358254 RPE_2145 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781069.1 2366867 R 316055 CDS YP_781070.1 115524159 4358256 2368049..2368549 1 NC_008435.1 PFAM: protein of unknown function DUF1468; KEGG: rpb:RPB_2033 TctB subunit of the tripartite tricarboxylate transport(TTT) family; hypothetical protein 2368549 4358256 RPE_2146 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781070.1 2368049 D 316055 CDS YP_781071.1 115524160 4358257 2368557..2370074 1 NC_008435.1 PFAM: protein of unknown function DUF112, transmembrane; KEGG: rpc:RPC_3268 protein of unknown function DUF112, transmembrane; hypothetical protein 2370074 4358257 RPE_2147 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781071.1 2368557 D 316055 CDS YP_781072.1 115524161 4358258 2370174..2371172 1 NC_008435.1 PFAM: Uncharacterized protein UPF0065; KEGG: rpd:RPD_3356 uncharacterized protein UPF0065; hypothetical protein 2371172 4358258 RPE_2148 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781072.1 2370174 D 316055 CDS YP_781073.1 115524162 4358259 2371332..2371937 1 NC_008435.1 PFAM: thymidylate synthase; KEGG: rpc:RPC_3266 thymidylate synthase; thymidylate synthase 2371937 4358259 RPE_2149 Rhodopseudomonas palustris BisA53 thymidylate synthase YP_781073.1 2371332 D 316055 CDS YP_781074.1 115524163 4358260 2372063..2372965 1 NC_008435.1 PFAM: thymidylate synthase; KEGG: rsp:RSP_0390 thymidylate synthase; thymidylate synthase 2372965 4358260 RPE_2150 Rhodopseudomonas palustris BisA53 thymidylate synthase YP_781074.1 2372063 D 316055 CDS YP_781075.1 115524164 4358261 2373237..2374085 1 NC_008435.1 KEGG: rpb:RPB_3835 hypothetical protein; hypothetical protein 2374085 4358261 RPE_2151 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781075.1 2373237 D 316055 CDS YP_781076.1 115524165 4358262 2374076..2374672 1 NC_008435.1 hypothetical protein 2374672 4358262 RPE_2152 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781076.1 2374076 D 316055 CDS YP_781077.1 115524166 4358263 complement(2374702..2377233) 1 NC_008435.1 KEGG: bja:bll5745 hypothetical protein; hypothetical protein 2377233 4358263 RPE_2153 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781077.1 2374702 R 316055 CDS YP_781078.1 115524167 4358264 complement(2377422..2378156) 1 NC_008435.1 KEGG: rpd:RPD_0005 hypothetical protein; hypothetical protein 2378156 4358264 RPE_2154 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781078.1 2377422 R 316055 CDS YP_781079.1 115524168 4358265 complement(2378243..2378539) 1 NC_008435.1 hypothetical protein 2378539 4358265 RPE_2155 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781079.1 2378243 R 316055 CDS YP_781080.1 115524169 4358266 2378780..2379259 1 NC_008435.1 KEGG: rpd:RPD_0009 hypothetical protein; hypothetical protein 2379259 4358266 RPE_2156 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781080.1 2378780 D 316055 CDS YP_781081.1 115524170 4358267 2379264..2379650 1 NC_008435.1 hypothetical protein 2379650 4358267 RPE_2157 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781081.1 2379264 D 316055 CDS YP_781082.1 115524171 4358268 2380401..2383046 1 NC_008435.1 hypothetical protein 2383046 4358268 RPE_2158 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781082.1 2380401 D 316055 CDS YP_781083.1 115524172 4358269 2384611..2385093 1 NC_008435.1 hypothetical protein 2385093 4358269 RPE_2159 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781083.1 2384611 D 316055 CDS YP_781084.1 115524173 4358270 2385090..2385629 1 NC_008435.1 hypothetical protein 2385629 4358270 RPE_2160 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781084.1 2385090 D 316055 CDS YP_781085.1 115524174 4358271 2385626..2386069 1 NC_008435.1 hypothetical protein 2386069 4358271 RPE_2161 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781085.1 2385626 D 316055 CDS YP_781086.1 115524175 4358272 2386132..2387562 1 NC_008435.1 PFAM: phage integrase domain protein SAM domain protein; phage integrase domain/SAM domain-containing protein 2387562 4358272 RPE_2162 Rhodopseudomonas palustris BisA53 phage integrase domain/SAM domain-containing protein YP_781086.1 2386132 D 316055 CDS YP_781087.1 115524176 4358273 2387915..2390833 1 NC_008435.1 hypothetical protein 2390833 4358273 RPE_2163 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781087.1 2387915 D 316055 CDS YP_781088.1 115524177 4358274 2390830..2393691 1 NC_008435.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD/DEAH box helicase domain protein; KEGG: noc:Noc_0063 type III restriction enzyme, res subunit; helicase domain-containing protein 2393691 4358274 RPE_2164 Rhodopseudomonas palustris BisA53 helicase domain-containing protein YP_781088.1 2390830 D 316055 CDS YP_781089.1 115524178 4358275 complement(2393672..2394637) 1 NC_008435.1 hypothetical protein 2394637 4358275 RPE_2165 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781089.1 2393672 R 316055 CDS YP_781090.1 115524179 4358276 complement(2394634..2396355) 1 NC_008435.1 KEGG: mca:MCA0729 hypothetical protein; hypothetical protein 2396355 4358276 RPE_2166 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781090.1 2394634 R 316055 CDS YP_781091.1 115524180 4358277 complement(2396355..2402525) 1 NC_008435.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ava:Ava_3253 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 2402525 4358277 RPE_2167 Rhodopseudomonas palustris BisA53 DEAD/DEAH box helicase YP_781091.1 2396355 R 316055 CDS YP_781092.1 115524181 4358278 complement(2402749..2403345) 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 2 domain-containing protein 2403345 4358278 RPE_2168 Rhodopseudomonas palustris BisA53 sigma-70 region 2 domain-containing protein YP_781092.1 2402749 R 316055 CDS YP_781093.1 115524182 4358279 complement(2403533..2405461) 1 NC_008435.1 KEGG: ava:Ava_B0306 hypothetical protein; hypothetical protein 2405461 4358279 RPE_2169 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781093.1 2403533 R 316055 CDS YP_781094.1 115524183 4358280 2405755..2407356 1 NC_008435.1 KEGG: ava:Ava_B0306 hypothetical protein; hypothetical protein 2407356 4358280 RPE_2170 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781094.1 2405755 D 316055 CDS YP_781095.1 115524184 4358281 2407369..2409393 1 NC_008435.1 KEGG: tth:TTC1428 hypothetical protein; hypothetical protein 2409393 4358281 RPE_2171 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781095.1 2407369 D 316055 CDS YP_781096.1 115524185 4358282 complement(2409501..2411429) 1 NC_008435.1 PFAM: peptidase M41; AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: mag:amb1687 ATP-dependent Zn protease; ATPase central domain-containing protein 2411429 4358282 RPE_2172 Rhodopseudomonas palustris BisA53 ATPase central domain-containing protein YP_781096.1 2409501 R 316055 CDS YP_781097.1 115524186 4358283 2412763..2413068 1 NC_008435.1 hypothetical protein 2413068 4358283 RPE_2173 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781097.1 2412763 D 316055 CDS YP_781098.1 115524187 4358284 2413520..2413819 1 NC_008435.1 PFAM: thymidylate synthase; KEGG: rpa:RPA3493 thymidylate synthase; thymidylate synthase 2413819 4358284 RPE_2174 Rhodopseudomonas palustris BisA53 thymidylate synthase YP_781098.1 2413520 D 316055 CDS YP_781099.1 115524188 4358285 2413825..2414238 1 NC_008435.1 KEGG: rpc:RPC_3265 hypothetical protein; hypothetical protein 2414238 4358285 RPE_2175 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781099.1 2413825 D 316055 CDS YP_781100.1 115524189 4358286 2414220..2414627 1 NC_008435.1 hypothetical protein 2414627 4358286 RPE_2176 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781100.1 2414220 D 316055 CDS YP_781101.1 115524190 4358287 2414634..2415149 1 NC_008435.1 PFAM: dihydrofolate reductase region; KEGG: rpc:RPC_3263 dihydrofolate reductase; dihydrofolate reductase 2415149 4358287 RPE_2177 Rhodopseudomonas palustris BisA53 dihydrofolate reductase YP_781101.1 2414634 D 316055 CDS YP_781102.1 115524191 4358288 2415307..2416455 1 NC_008435.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: rpc:RPC_3262 HflK protein; HflK protein 2416455 4358288 RPE_2178 Rhodopseudomonas palustris BisA53 HflK protein YP_781102.1 2415307 D 316055 CDS YP_781103.1 115524192 4358289 2416452..2417357 1 NC_008435.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: rpc:RPC_3261 HflC protein; HflC protein 2417357 4358289 RPE_2179 Rhodopseudomonas palustris BisA53 HflC protein YP_781103.1 2416452 D 316055 CDS YP_781104.1 115524193 4358290 2417511..2417711 1 NC_008435.1 KEGG: rpc:RPC_3260 hypothetical protein; hypothetical protein 2417711 4358290 RPE_2180 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781104.1 2417511 D 316055 CDS YP_781105.1 115524194 4358291 2417907..2419406 1 NC_008435.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_3259 peptidase S1C, Do; peptidase S1C, Do 2419406 4358291 RPE_2181 Rhodopseudomonas palustris BisA53 peptidase S1C, Do YP_781105.1 2417907 D 316055 CDS YP_781106.1 115524195 4358292 2419697..2420794 1 NC_008435.1 PFAM: transposase, IS4 family protein; KEGG: rpc:RPC_2070 transposase, IS4; transposase, IS4 family protein 2420794 4358292 RPE_2182 Rhodopseudomonas palustris BisA53 transposase, IS4 family protein YP_781106.1 2419697 D 316055 CDS YP_781107.1 115524196 4359540 2421462..2422004 1 NC_008435.1 KEGG: rpc:RPC_3258 hypothetical protein; hypothetical protein 2422004 4359540 RPE_2183 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781107.1 2421462 D 316055 CDS YP_781108.1 115524197 4359541 2422192..2422713 1 NC_008435.1 KEGG: rpa:RPA2267 hypothetical protein; hypothetical protein 2422713 4359541 RPE_2184 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781108.1 2422192 D 316055 CDS YP_781109.1 115524198 4359542 complement(2422735..2423586) 1 NC_008435.1 KEGG: rpb:RPB_3347 phosphoserine phosphatase SerB:HAD-superfamily hydrolase subfamily IB, PSPase-like; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 2423586 4359542 RPE_2185 Rhodopseudomonas palustris BisA53 phosphoserine phosphatase SerB YP_781109.1 2422735 R 316055 CDS YP_781110.1 115524199 4359543 2423621..2424607 1 NC_008435.1 KEGG: rpa:RPA2030 tRNA isopentenyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 2424607 4359543 RPE_2186 Rhodopseudomonas palustris BisA53 tRNA delta(2)-isopentenylpyrophosphate transferase YP_781110.1 2423621 D 316055 CDS YP_781111.1 115524200 4359544 2425025..2426803 1 NC_008435.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: rpa:RPA2031 acetolactate synthase (large subunit); acetolactate synthase 3 catalytic subunit 2426803 4359544 RPE_2187 Rhodopseudomonas palustris BisA53 acetolactate synthase 3 catalytic subunit YP_781111.1 2425025 D 316055 CDS YP_781112.1 115524201 4359545 2426839..2427828 1 NC_008435.1 PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rpc:RPC_3254 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; hypothetical protein 2427828 4359545 RPE_2188 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781112.1 2426839 D 316055 CDS YP_781113.1 115524202 4359546 2427931..2428473 1 NC_008435.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2428473 ilvH 4359546 ilvH Rhodopseudomonas palustris BisA53 acetolactate synthase 3 regulatory subunit YP_781113.1 2427931 D 316055 CDS YP_781114.1 115524203 4359547 complement(2428499..2428894) 1 NC_008435.1 KEGG: rpc:RPC_3252 putative AtsE; putative AtsE 2428894 4359547 RPE_2190 Rhodopseudomonas palustris BisA53 putative AtsE YP_781114.1 2428499 R 316055 CDS YP_781115.1 115524204 4359548 2429068..2429412 1 NC_008435.1 PFAM: SpoVT/AbrB domain protein; KEGG: rpc:RPC_3251 transcriptional regulator/antitoxin, MazE; transcriptional regulator/antitoxin MazE 2429412 4359548 RPE_2191 Rhodopseudomonas palustris BisA53 transcriptional regulator/antitoxin MazE YP_781115.1 2429068 D 316055 CDS YP_781116.1 115524205 4359549 2429409..2429750 1 NC_008435.1 PFAM: PemK family protein; KEGG: gka:GK1648 ppGpp-regulated growth inhibitor (ChpA/MazF); transcriptional modulator of MazE/toxin MazF 2429750 4359549 RPE_2192 Rhodopseudomonas palustris BisA53 transcriptional modulator of MazE/toxin MazF YP_781116.1 2429409 D 316055 CDS YP_781117.1 115524206 4359551 2430906..2431925 1 NC_008435.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2431925 4359551 RPE_2195 Rhodopseudomonas palustris BisA53 ketol-acid reductoisomerase YP_781117.1 2430906 D 316055 CDS YP_781118.1 115524207 4359552 2432315..2433157 1 NC_008435.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bja:bll7569 probable O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 2433157 4359552 RPE_2196 Rhodopseudomonas palustris BisA53 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_781118.1 2432315 D 316055 CDS YP_781119.1 115524208 4359553 2433187..2434038 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_3247 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2434038 4359553 RPE_2197 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_781119.1 2433187 D 316055 CDS YP_781120.1 115524209 4359554 2434242..2435945 1 NC_008435.1 PFAM: sulfatase; KEGG: rpc:RPC_3246 sulfatase; sulfatase 2435945 4359554 RPE_2198 Rhodopseudomonas palustris BisA53 sulfatase YP_781120.1 2434242 D 316055 CDS YP_781121.1 115524210 4359555 2436168..2437037 1 NC_008435.1 KEGG: rpc:RPC_3245 hypothetical protein; hypothetical protein 2437037 4359555 RPE_2199 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781121.1 2436168 D 316055 CDS YP_781122.1 115524211 4359556 complement(2437233..2438573) 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2421 MFS permease; major facilitator transporter 2438573 4359556 RPE_2200 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_781122.1 2437233 R 316055 CDS YP_781123.1 115524212 4359557 complement(2438729..2440279) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rpc:RPC_3244 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 2440279 4359557 RPE_2201 Rhodopseudomonas palustris BisA53 glycine betaine ABC transporter substrate-binding protein YP_781123.1 2438729 R 316055 CDS YP_781124.1 115524213 4359558 complement(2440276..2441043) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2105 ABC transporter related; ABC transporter-like protein 2441043 4359558 RPE_2202 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_781124.1 2440276 R 316055 CDS YP_781125.1 115524214 4359559 2441167..2441433 1 NC_008435.1 KEGG: tbd:Tbd_0449 hypothetical protein; hypothetical protein 2441433 4359559 RPE_2203 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781125.1 2441167 D 316055 CDS YP_781126.1 115524215 4359560 2441430..2441645 1 NC_008435.1 hypothetical protein 2441645 4359560 RPE_2204 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781126.1 2441430 D 316055 CDS YP_781127.1 115524216 4359561 2441668..2442366 1 NC_008435.1 KEGG: bja:bll6480 hypothetical protein; hypothetical protein 2442366 4359561 RPE_2205 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781127.1 2441668 D 316055 CDS YP_781128.1 115524217 4359562 2442441..2443430 1 NC_008435.1 PFAM: protein of unknown function DUF344; KEGG: rpc:RPC_3238 protein of unknown function DUF344; hypothetical protein 2443430 4359562 RPE_2206 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781128.1 2442441 D 316055 CDS YP_781129.1 115524218 4359563 complement(2443480..2443713) 1 NC_008435.1 PFAM: SpoVT/AbrB domain protein; KEGG: nmu:Nmul_A0985 transcriptional regulator/antitoxin, MazE; transcriptional regulator/antitoxin MazE 2443713 4359563 RPE_2207 Rhodopseudomonas palustris BisA53 transcriptional regulator/antitoxin MazE YP_781129.1 2443480 R 316055 CDS YP_781130.1 115524219 4359564 complement(2443764..2444780) 1 NC_008435.1 KEGG: rpd:RPD_2111 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2444780 4359564 RPE_2208 Rhodopseudomonas palustris BisA53 biotin synthase YP_781130.1 2443764 R 316055 CDS YP_781131.1 115524220 4359565 2445263..2446828 1 NC_008435.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2446828 4359565 RPE_2209 Rhodopseudomonas palustris BisA53 2-isopropylmalate synthase YP_781131.1 2445263 D 316055 CDS YP_781132.1 115524221 4359566 2447007..2448011 1 NC_008435.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpa:RPA2047 TrapT family, DctP subunit, C4-dicarboxylate periplasmic binding protein; TRAP dicarboxylate transporter subunit DctP 2448011 4359566 RPE_2210 Rhodopseudomonas palustris BisA53 TRAP dicarboxylate transporter subunit DctP YP_781132.1 2447007 D 316055 CDS YP_781133.1 115524222 4359567 2448137..2448721 1 NC_008435.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: rpd:RPD_2114 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 2448721 4359567 RPE_2211 Rhodopseudomonas palustris BisA53 tripartite ATP-independent periplasmic transporter DctQ YP_781133.1 2448137 D 316055 CDS YP_781134.1 115524223 4359568 2448718..2450043 1 NC_008435.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpd:RPD_2115 TRAP dicarboxylate transporter-DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 2450043 4359568 RPE_2212 Rhodopseudomonas palustris BisA53 TRAP C4-dicarboxylate transport system permease DctM YP_781134.1 2448718 D 316055 CDS YP_781135.1 115524224 4359569 2450166..2450750 1 NC_008435.1 KEGG: rpa:RPA2050 hypothetical protein; hypothetical protein 2450750 4359569 RPE_2213 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781135.1 2450166 D 316055 CDS YP_781136.1 115524225 4359571 complement(2451199..2451555) 1 NC_008435.1 hypothetical protein 2451555 4359571 RPE_2214 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781136.1 2451199 R 316055 CDS YP_781137.1 115524226 4359572 2451854..2453104 1 NC_008435.1 PFAM: glycosyl transferase, family 28; KEGG: sth:STH2411 UDP-glucose:sterol glucosyltransferase; glycosyl transferase family protein 2453104 4359572 RPE_2215 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_781137.1 2451854 D 316055 CDS YP_781138.1 115524227 4359573 complement(2453101..2453532) 1 NC_008435.1 KEGG: rpd:RPD_0918 hypothetical protein; hypothetical protein 2453532 4359573 RPE_2216 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781138.1 2453101 R 316055 CDS YP_781139.1 115524228 4359574 complement(2453653..2454423) 1 NC_008435.1 catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase 2454423 4359574 RPE_2217 Rhodopseudomonas palustris BisA53 uroporphyrin-III C-methyltransferase YP_781139.1 2453653 R 316055 CDS YP_781140.1 115524229 4359575 complement(2454420..2455763) 1 NC_008435.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid; cobyrinic acid a,c-diamide synthase 2455763 4359575 RPE_2218 Rhodopseudomonas palustris BisA53 cobyrinic acid a,c-diamide synthase YP_781140.1 2454420 R 316055 CDS YP_781141.1 115524230 4359576 complement(2455750..2456529) 1 NC_008435.1 KEGG: rpd:RPD_2314 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C(11)-methyltransferase 2456529 4359576 RPE_2219 Rhodopseudomonas palustris BisA53 precorrin-4 C(11)-methyltransferase YP_781141.1 2455750 R 316055 CDS YP_781142.1 115524231 4359577 complement(2456526..2456921) 1 NC_008435.1 KEGG: rpa:RPA2085 cobalamin biosynthesis protein G; CbiG; cobalamin biosynthesis protein CbiG 2456921 4359577 RPE_2220 Rhodopseudomonas palustris BisA53 cobalamin biosynthesis protein CbiG YP_781142.1 2456526 R 316055 CDS YP_781143.1 115524232 4359578 complement(2456918..2458141) 1 NC_008435.1 KEGG: rpb:RPB_3182 precorrin-6y C5,15-methyltransferase, subunit CbiE; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Methyltransferase type 12; precorrin-6y C5,15-methyltransferase subunit CbiE 2458141 4359578 RPE_2221 Rhodopseudomonas palustris BisA53 precorrin-6y C5,15-methyltransferase subunit CbiE YP_781143.1 2456918 R 316055 CDS YP_781144.1 115524233 4359579 2458245..2458922 1 NC_008435.1 CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6; cobalt-precorrin-6x reductase 2458922 4359579 RPE_2222 Rhodopseudomonas palustris BisA53 cobalt-precorrin-6x reductase YP_781144.1 2458245 D 316055 CDS YP_781145.1 115524234 4359580 complement(2458889..2459665) 1 NC_008435.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpc:RPC_1886 precorrin-3B C17-methyltransferase; precorrin-3B C(17)-methyltransferase 2459665 4359580 RPE_2223 Rhodopseudomonas palustris BisA53 precorrin-3B C(17)-methyltransferase YP_781145.1 2458889 R 316055 CDS YP_781146.1 115524235 4359581 complement(2459662..2460393) 1 NC_008435.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rpc:RPC_1887 precorrin-2 C20-methyltransferase; precorrin-2 C(20)-methyltransferase 2460393 4359581 RPE_2224 Rhodopseudomonas palustris BisA53 precorrin-2 C(20)-methyltransferase YP_781146.1 2459662 R 316055 CDS YP_781147.1 115524236 4359582 complement(2460390..2461019) 1 NC_008435.1 catalyzes the interconversion of precorrin-8X and hydrogenobyrinate; precorrin-8X methylmutase 2461019 cobH 4359582 cobH Rhodopseudomonas palustris BisA53 precorrin-8X methylmutase YP_781147.1 2460390 R 316055 CDS YP_781148.1 115524237 4359583 complement(2461016..2461744) 1 NC_008435.1 KEGG: rpc:RPC_1889 cobaltochelatase, CobN subunit; hypothetical protein 2461744 4359583 RPE_2226 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781148.1 2461016 R 316055 CDS YP_781149.1 115524238 4359584 complement(2461830..2462936) 1 NC_008435.1 TIGRFAM: CitB domain protein; KEGG: rpc:RPC_1892 citrate utilization protein B; CitB domain-containing protein 2462936 4359584 RPE_2227 Rhodopseudomonas palustris BisA53 CitB domain-containing protein YP_781149.1 2461830 R 316055 CDS YP_781150.1 115524239 4359585 complement(2462923..2464305) 1 NC_008435.1 catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; tricarballylate dehydrogenase 2464305 4359585 RPE_2228 Rhodopseudomonas palustris BisA53 tricarballylate dehydrogenase YP_781150.1 2462923 R 316055 CDS YP_781151.1 115524240 4359586 2464485..2465549 1 NC_008435.1 PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: rpb:RPB_3282 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2465549 4359586 RPE_2229 Rhodopseudomonas palustris BisA53 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_781151.1 2464485 D 316055 CDS YP_781152.1 115524241 4359587 2465546..2466304 1 NC_008435.1 catalyzes the formation of precorrin 6x from precorrin 5; precorrin 6A synthase 2466304 4359587 RPE_2230 Rhodopseudomonas palustris BisA53 precorrin 6A synthase YP_781152.1 2465546 D 316055 CDS YP_781153.1 115524242 4359588 complement(2466486..2467163) 1 NC_008435.1 KEGG: rru:Rru_A0458 hypothetical protein; hypothetical protein 2467163 4359588 RPE_2231 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781153.1 2466486 R 316055 CDS YP_781154.1 115524243 4359589 complement(2467207..2467917) 1 NC_008435.1 KEGG: rpd:RPD_0641 Cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; Cob(II)yrinic acid a,c-diamide reductase 2467917 4359589 RPE_2232 Rhodopseudomonas palustris BisA53 Cob(II)yrinic acid a,c-diamide reductase YP_781154.1 2467207 R 316055 CDS YP_781155.1 115524244 4359590 2468641..2469084 1 NC_008435.1 PFAM: protein of unknown function DUF1636; KEGG: rpb:RPB_0741 protein of unknown function DUF1636; hypothetical protein 2469084 4359590 RPE_2233 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781155.1 2468641 D 316055 CDS YP_781156.1 115524245 4359591 2469081..2469617 1 NC_008435.1 PFAM: cobalbumin biosynthesis enzyme; KEGG: rpc:RPC_3747 cobalbumin biosynthesis enzyme; adenosylcobinamide kinase 2469617 4359591 RPE_2234 Rhodopseudomonas palustris BisA53 adenosylcobinamide kinase YP_781156.1 2469081 D 316055 CDS YP_781157.1 115524246 4359296 2469774..2470796 1 NC_008435.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rpd:RPD_0637 cobalamin (vitamin B12) biosynthesis CobW; cobalamin biosynthesis protein CobW 2470796 4359296 RPE_2235 Rhodopseudomonas palustris BisA53 cobalamin biosynthesis protein CobW YP_781157.1 2469774 D 316055 CDS YP_781158.1 115524247 4359297 2470947..2474777 1 NC_008435.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism; cobaltochelatase subunit CobN 2474777 cobN 4359297 cobN Rhodopseudomonas palustris BisA53 cobaltochelatase subunit CobN YP_781158.1 2470947 D 316055 CDS YP_781159.1 115524248 4359298 2474774..2475397 1 NC_008435.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 2475397 4359298 RPE_2237 Rhodopseudomonas palustris BisA53 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_781159.1 2474774 D 316055 CDS YP_781160.1 115524249 4359299 2475864..2477351 1 NC_008435.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 2477351 4359299 RPE_2238 Rhodopseudomonas palustris BisA53 cobyric acid synthase YP_781160.1 2475864 D 316055 CDS YP_781161.1 115524250 4359300 complement(2477324..2478295) 1 NC_008435.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: rpc:RPC_3744 cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD 2478295 4359300 RPE_2239 Rhodopseudomonas palustris BisA53 cobalamin biosynthesis protein CobD YP_781161.1 2477324 R 316055 CDS YP_781162.1 115524251 4359301 2478331..2479350 1 NC_008435.1 PFAM: aminotransferase, class I and II; KEGG: rpc:RPC_3743 aminotransferase, class I and II; class I and II aminotransferase 2479350 4359301 RPE_2240 Rhodopseudomonas palustris BisA53 class I and II aminotransferase YP_781162.1 2478331 D 316055 CDS YP_781163.1 115524252 4359302 complement(2479337..2479654) 1 NC_008435.1 hypothetical protein 2479654 4359302 RPE_2241 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781163.1 2479337 R 316055 CDS YP_781164.1 115524253 4359303 2479872..2481227 1 NC_008435.1 KEGG: rpc:RPC_3217 hypothetical protein; hypothetical protein 2481227 4359303 RPE_2242 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781164.1 2479872 D 316055 CDS YP_781165.1 115524254 4359304 2481232..2482092 1 NC_008435.1 KEGG: rpc:RPC_3216 hypothetical protein; hypothetical protein 2482092 4359304 RPE_2243 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781165.1 2481232 D 316055 CDS YP_781166.1 115524255 4359305 complement(2482117..2482914) 1 NC_008435.1 KEGG: rpb:RPB_2180 hypothetical protein; hypothetical protein 2482914 4359305 RPE_2244 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781166.1 2482117 R 316055 CDS YP_781167.1 115524256 4359306 2483098..2483514 1 NC_008435.1 KEGG: rpc:RPC_3214 hypothetical protein; hypothetical protein 2483514 4359306 RPE_2245 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781167.1 2483098 D 316055 CDS YP_781168.1 115524257 4359307 complement(2483582..2485708) 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_3208 periplasmic sensor hybrid histidine kinase; periplasmic sensor hybrid histidine kinase 2485708 4359307 RPE_2246 Rhodopseudomonas palustris BisA53 periplasmic sensor hybrid histidine kinase YP_781168.1 2483582 R 316055 CDS YP_781169.1 115524258 4359308 2485939..2486253 1 NC_008435.1 KEGG: rpc:RPC_3207 putative cytochrome c precursor; putative cytochrome c 2486253 4359308 RPE_2247 Rhodopseudomonas palustris BisA53 putative cytochrome c YP_781169.1 2485939 D 316055 CDS YP_781170.1 115524259 4359309 2486382..2487521 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_3267 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 2487521 4359309 RPE_2248 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_781170.1 2486382 D 316055 CDS YP_781171.1 115524260 4359310 2487648..2488811 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_3266 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 2488811 4359310 RPE_2249 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_781171.1 2487648 D 316055 CDS YP_781172.1 115524261 4359311 2489002..2489652 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rpd:RPD_2200 glutathione S-transferase-like; glutathione S-transferase 2489652 4359311 RPE_2250 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_781172.1 2489002 D 316055 CDS YP_781173.1 115524262 4359312 2489770..2490591 1 NC_008435.1 SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: rpc:RPC_3204 transcriptional regulator, AraC family; AraC family transcriptional regulator 2490591 4359312 RPE_2251 Rhodopseudomonas palustris BisA53 AraC family transcriptional regulator YP_781173.1 2489770 D 316055 CDS YP_781174.1 115524263 4359313 2490717..2491583 1 NC_008435.1 PFAM: protein of unknown function DUF849; KEGG: rpa:RPA2141 hypothetical protein; hypothetical protein 2491583 4359313 RPE_2252 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781174.1 2490717 D 316055 CDS YP_781175.1 115524264 4359314 2491690..2493291 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_3261 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 2493291 4359314 RPE_2253 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_781175.1 2491690 D 316055 CDS YP_781176.1 115524265 4359315 2493426..2495045 1 NC_008435.1 PFAM: carboxyl transferase; KEGG: rpc:RPC_3201 propionyl-CoA carboxylase; propionyl-CoA carboxylase 2495045 4359315 RPE_2254 Rhodopseudomonas palustris BisA53 propionyl-CoA carboxylase YP_781176.1 2493426 D 316055 CDS YP_781177.1 115524266 4359316 2495042..2497057 1 NC_008435.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rpd:RPD_2205 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase subunit L 2497057 4359316 RPE_2255 Rhodopseudomonas palustris BisA53 carbamoyl-phosphate synthase subunit L YP_781177.1 2495042 D 316055 CDS YP_781178.1 115524267 4359317 2497089..2497868 1 NC_008435.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2497868 4359317 RPE_2256 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase YP_781178.1 2497089 D 316055 CDS YP_781179.1 115524268 4359318 2498150..2499604 1 NC_008435.1 KEGG: rpd:RPD_2208 hypothetical protein; hypothetical protein 2499604 4359318 RPE_2257 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781179.1 2498150 D 316055 CDS YP_781180.1 115524269 4359319 complement(2499612..2500865) 1 NC_008435.1 PFAM: beta-lactamase; KEGG: rpa:RPA2148 beta-lactamase; beta-lactamase 2500865 4359319 RPE_2258 Rhodopseudomonas palustris BisA53 beta-lactamase YP_781180.1 2499612 R 316055 CDS YP_781181.1 115524270 4359320 2501178..2502116 1 NC_008435.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_3194 protein of unknown function DUF6, transmembrane; hypothetical protein 2502116 4359320 RPE_2259 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781181.1 2501178 D 316055 CDS YP_781182.1 115524271 4359321 2502231..2503661 1 NC_008435.1 PFAM: aldehyde dehydrogenase; KEGG: rpd:RPD_2215 aldehyde dehydrogenase; aldehyde dehydrogenase 2503661 4359321 RPE_2260 Rhodopseudomonas palustris BisA53 aldehyde dehydrogenase YP_781182.1 2502231 D 316055 CDS YP_781183.1 115524272 4359322 2504136..2505842 1 NC_008435.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 2505842 4359322 RPE_2261 Rhodopseudomonas palustris BisA53 dihydroxy-acid dehydratase YP_781183.1 2504136 D 316055 CDS YP_781184.1 115524273 4359323 complement(2505857..2506135) 1 NC_008435.1 KEGG: rpc:RPC_3190 hypothetical protein; hypothetical protein 2506135 4359323 RPE_2262 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781184.1 2505857 R 316055 CDS YP_781185.1 115524274 4359324 2506381..2506662 1 NC_008435.1 KEGG: rpa:RPA2158 hypothetical protein; hypothetical protein 2506662 4359324 RPE_2263 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781185.1 2506381 D 316055 CDS YP_781186.1 115524275 4359325 2506928..2508082 1 NC_008435.1 KEGG: rpc:RPC_3188 hypothetical protein; hypothetical protein 2508082 4359325 RPE_2264 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781186.1 2506928 D 316055 CDS YP_781187.1 115524276 4359326 2508321..2509058 1 NC_008435.1 hypothetical protein 2509058 4359326 RPE_2265 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781187.1 2508321 D 316055 CDS YP_781188.1 115524277 4359327 2509152..2510366 1 NC_008435.1 KEGG: rpc:RPC_0609 hypothetical protein; hypothetical protein 2510366 4359327 RPE_2266 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781188.1 2509152 D 316055 CDS YP_781189.1 115524278 4359328 complement(2510430..2510882) 1 NC_008435.1 KEGG: rpd:RPD_2221 hypothetical protein; hypothetical protein 2510882 4359328 RPE_2267 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781189.1 2510430 R 316055 CDS YP_781190.1 115524279 4359329 complement(2510942..2511586) 1 NC_008435.1 KEGG: pcr:Pcryo_2512 hypothetical protein; hypothetical protein 2511586 4359329 RPE_2268 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781190.1 2510942 R 316055 CDS YP_781191.1 115524280 4359330 complement(2511583..2512722) 1 NC_008435.1 KEGG: sth:STH2171 hypothetical protein; hypothetical protein 2512722 4359330 RPE_2269 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781191.1 2511583 R 316055 CDS YP_781192.1 115524281 4359331 2513144..2513581 1 NC_008435.1 KEGG: rpc:RPC_1244 hypothetical protein; hypothetical protein 2513581 4359331 RPE_2270 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781192.1 2513144 D 316055 CDS YP_781193.1 115524282 4359332 complement(2513708..2514460) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpd:RPD_2222 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2514460 4359332 RPE_2271 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_781193.1 2513708 R 316055 CDS YP_781194.1 115524283 4359333 2514541..2514867 1 NC_008435.1 PFAM: regulatory protein, ArsR; KEGG: rpd:RPD_2223 regulatory protein, ArsR; ArsR family transcriptional regulator 2514867 4359333 RPE_2272 Rhodopseudomonas palustris BisA53 ArsR family transcriptional regulator YP_781194.1 2514541 D 316055 CDS YP_781195.1 115524284 4359334 complement(2514905..2516773) 1 NC_008435.1 hypothetical protein 2516773 4359334 RPE_2273 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781195.1 2514905 R 316055 CDS YP_781196.1 115524285 4359335 2517445..2517768 1 NC_008435.1 PFAM: regulatory protein, ArsR; KEGG: rpd:RPD_2223 regulatory protein, ArsR; ArsR family transcriptional regulator 2517768 4359335 RPE_2274 Rhodopseudomonas palustris BisA53 ArsR family transcriptional regulator YP_781196.1 2517445 D 316055 CDS YP_781197.1 115524286 4359336 complement(2517916..2521119) 1 NC_008435.1 PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rpc:RPC_3182 peptidase C14, caspase catalytic subunit P20; peptidase C14, caspase catalytic subunit p20 2521119 4359336 RPE_2275 Rhodopseudomonas palustris BisA53 peptidase C14, caspase catalytic subunit p20 YP_781197.1 2517916 R 316055 CDS YP_781198.1 115524287 4359337 complement(2521642..2522106) 1 NC_008435.1 PFAM: regulatory protein, MarR; KEGG: rpc:RPC_3178 transcriptional regulator, MarR family; MarR family transcriptional regulator 2522106 4359337 RPE_2276 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_781198.1 2521642 R 316055 CDS YP_781199.1 115524288 4359338 2522232..2523053 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_3177 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2523053 4359338 RPE_2277 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_781199.1 2522232 D 316055 CDS YP_781200.1 115524289 4359339 2523106..2523873 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_3176 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2523873 4359339 RPE_2278 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_781200.1 2523106 D 316055 CDS YP_781201.1 115524290 4359340 2524086..2524373 1 NC_008435.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpc:RPC_3180 excinuclease ABC, C subunit-like; excinuclease ABC subunit C 2524373 4359340 RPE_2279 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_781201.1 2524086 D 316055 CDS YP_781202.1 115524291 4359341 2524576..2525196 1 NC_008435.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_2940 methyltransferase type 11; type 11 methyltransferase 2525196 4359341 RPE_2280 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_781202.1 2524576 D 316055 CDS YP_781203.1 115524292 4359342 2525330..2525749 1 NC_008435.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpc:RPC_3180 excinuclease ABC, C subunit-like; excinuclease ABC subunit C 2525749 4359342 RPE_2281 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_781203.1 2525330 D 316055 CDS YP_781204.1 115524293 4359343 complement(2525999..2526604) 1 NC_008435.1 TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; KEGG: rpd:RPD_2224 YgfB and YecA; yecA family protein 2526604 4359343 RPE_2282 Rhodopseudomonas palustris BisA53 yecA family protein YP_781204.1 2525999 R 316055 CDS YP_781205.1 115524294 4359344 complement(2527104..2528744) 1 NC_008435.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is co-regulated with symbiotic nitrogen fixation genes; chaperonin GroEL 2528744 groEL 4359344 groEL Rhodopseudomonas palustris BisA53 chaperonin GroEL YP_781205.1 2527104 R 316055 CDS YP_781206.1 115524295 4359345 complement(2528850..2529164) 1 NC_008435.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 2529164 groES 4359345 groES Rhodopseudomonas palustris BisA53 co-chaperonin GroES YP_781206.1 2528850 R 316055 CDS YP_781207.1 115524296 4359346 2529483..2529782 1 NC_008435.1 PFAM: Usg family protein; KEGG: rpb:RPB_3232 hypothetical protein; hypothetical protein 2529782 4359346 RPE_2285 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781207.1 2529483 D 316055 CDS YP_781208.1 115524297 4359347 2529850..2530113 1 NC_008435.1 KEGG: rpd:RPD_2230 hypothetical protein; hypothetical protein 2530113 4359347 RPE_2286 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781208.1 2529850 D 316055 CDS YP_781209.1 115524298 4359106 2530141..2530797 1 NC_008435.1 KEGG: rpc:RPC_3168 hypothetical protein; hypothetical protein 2530797 4359106 RPE_2287 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781209.1 2530141 D 316055 CDS YP_781210.1 115524299 4359107 complement(2530801..2532051) 1 NC_008435.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: rpc:RPC_3167 Na+ dependent nucleoside transporter-like; Na+ dependent nucleoside transporter 2532051 4359107 RPE_2288 Rhodopseudomonas palustris BisA53 Na+ dependent nucleoside transporter YP_781210.1 2530801 R 316055 CDS YP_781211.1 115524300 4359108 2532277..2534466 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_3798 multi-sensor hybrid histidine kinase; periplasmic sensor hybrid histidine kinase 2534466 4359108 RPE_2289 Rhodopseudomonas palustris BisA53 periplasmic sensor hybrid histidine kinase YP_781211.1 2532277 D 316055 CDS YP_781212.1 115524301 4359109 complement(2534710..2535927) 1 NC_008435.1 PFAM: acyltransferase 3; KEGG: bja:bll7034 MDO-like protein; acyltransferase 3 2535927 4359109 RPE_2290 Rhodopseudomonas palustris BisA53 acyltransferase 3 YP_781212.1 2534710 R 316055 CDS YP_781213.1 115524302 4359110 complement(2536165..2536923) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_3165 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2536923 4359110 RPE_2291 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_781213.1 2536165 R 316055 CDS YP_781214.1 115524303 4359112 2537677..2538717 1 NC_008435.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 2538717 4359112 RPE_2293 Rhodopseudomonas palustris BisA53 transposase IS116/IS110/IS902 family protein YP_781214.1 2537677 D 316055 CDS YP_781215.1 115524304 4359113 complement(2539074..2539820) 1 NC_008435.1 KEGG: rpc:RPC_3163 putative proteasome-type protease; putative proteasome-type protease 2539820 4359113 RPE_2294 Rhodopseudomonas palustris BisA53 putative proteasome-type protease YP_781215.1 2539074 R 316055 CDS YP_781216.1 115524305 4359114 complement(2539908..2540756) 1 NC_008435.1 PFAM: transglutaminase domain protein; transglutaminase, N-terminal domain protein; KEGG: rpc:RPC_3159 transglutaminase-like; transglutaminase domain-containing protein 2540756 4359114 RPE_2295 Rhodopseudomonas palustris BisA53 transglutaminase domain-containing protein YP_781216.1 2539908 R 316055 CDS YP_781217.1 115524306 4359115 complement(2540806..2541750) 1 NC_008435.1 PFAM: protein of unknown function DUF403; KEGG: rpc:RPC_3158 protein of unknown function DUF403; hypothetical protein 2541750 4359115 RPE_2296 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781217.1 2540806 R 316055 CDS YP_781218.1 115524307 4359116 complement(2541860..2543377) 1 NC_008435.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rpc:RPC_3157 protein of unknown function DUF404; hypothetical protein 2543377 4359116 RPE_2297 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781218.1 2541860 R 316055 CDS YP_781219.1 115524308 4359117 2543499..2544236 1 NC_008435.1 PFAM: molybdopterin binding domain; KEGG: rpc:RPC_3156 molybdopterin binding domain; molybdopterin binding domain-containing protein 2544236 4359117 RPE_2298 Rhodopseudomonas palustris BisA53 molybdopterin binding domain-containing protein YP_781219.1 2543499 D 316055 CDS YP_781220.1 115524309 4359118 2544250..2544768 1 NC_008435.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 2544768 4359118 RPE_2299 Rhodopseudomonas palustris BisA53 xanthine-guanine phosphoribosyltransferase YP_781220.1 2544250 D 316055 CDS YP_781221.1 115524310 4359119 2545050..2545667 1 NC_008435.1 KEGG: rpd:RPD_2244 hypothetical protein; hypothetical protein 2545667 4359119 RPE_2300 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781221.1 2545050 D 316055 CDS YP_781222.1 115524311 4359120 complement(2545818..2546840) 1 NC_008435.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 2546840 4359120 RPE_2301 Rhodopseudomonas palustris BisA53 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_781222.1 2545818 R 316055 CDS YP_781223.1 115524312 4359121 2546995..2547705 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rpa:RPA2182 putative glutathione S-transferase; glutathione S-transferase 2547705 4359121 RPE_2302 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_781223.1 2546995 D 316055 CDS YP_781224.1 115524313 4359122 2547869..2548552 1 NC_008435.1 PFAM: DSBA oxidoreductase; KEGG: rpb:RPB_3208 DsbA oxidoreductase; DSBA oxidoreductase 2548552 4359122 RPE_2303 Rhodopseudomonas palustris BisA53 DSBA oxidoreductase YP_781224.1 2547869 D 316055 CDS YP_781225.1 115524314 4359123 2548552..2549529 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpd:RPD_2248 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 2549529 4359123 RPE_2304 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_781225.1 2548552 D 316055 CDS YP_781226.1 115524315 4359124 complement(2549722..2550612) 1 NC_008435.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2550612 4359124 RPE_2305 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase YP_781226.1 2549722 R 316055 CDS YP_781227.1 115524316 4359126 2551755..2552165 1 NC_008435.1 KEGG: rpc:RPC_3150 hypothetical protein; hypothetical protein 2552165 4359126 RPE_2306 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781227.1 2551755 D 316055 CDS YP_781228.1 115524317 4359127 complement(2552185..2553378) 1 NC_008435.1 PFAM: monooxygenase, FAD-binding; KEGG: rpc:RPC_3149 monooxygenase, FAD-binding; salicylate 1-monooxygenase 2553378 4359127 RPE_2307 Rhodopseudomonas palustris BisA53 salicylate 1-monooxygenase YP_781228.1 2552185 R 316055 CDS YP_781229.1 115524318 4359128 complement(2553385..2553630) 1 NC_008435.1 KEGG: rpc:RPC_3148 hypothetical protein; hypothetical protein 2553630 4359128 RPE_2308 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781229.1 2553385 R 316055 CDS YP_781230.1 115524319 4359129 2553843..2555021 1 NC_008435.1 KEGG: rpc:RPC_3147 hypothetical protein; hypothetical protein 2555021 4359129 RPE_2309 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781230.1 2553843 D 316055 CDS YP_781231.1 115524320 4359130 2555062..2555826 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_3146 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2555826 4359130 RPE_2310 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_781231.1 2555062 D 316055 CDS YP_781232.1 115524321 4359131 complement(2555784..2557193) 1 NC_008435.1 KEGG: rpc:RPC_3145 hypothetical protein; hypothetical protein 2557193 4359131 RPE_2311 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781232.1 2555784 R 316055 CDS YP_781233.1 115524322 4359132 2557443..2558270 1 NC_008435.1 KEGG: rpc:RPC_3144 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein; serine O-acetyltransferase 2558270 4359132 RPE_2312 Rhodopseudomonas palustris BisA53 serine O-acetyltransferase YP_781233.1 2557443 D 316055 CDS YP_781234.1 115524323 4359133 2558415..2558633 1 NC_008435.1 KEGG: rpd:RPD_3287 hypothetical protein; hypothetical protein 2558633 4359133 RPE_2313 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781234.1 2558415 D 316055 CDS YP_781235.1 115524324 4359134 complement(2558651..2559364) 1 NC_008435.1 KEGG: rpc:RPC_3142 hypothetical protein; hypothetical protein 2559364 4359134 RPE_2314 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781235.1 2558651 R 316055 CDS YP_781236.1 115524325 4359135 2559557..2559886 1 NC_008435.1 KEGG: nwi:Nwi_2173 hypothetical protein; hypothetical protein 2559886 4359135 RPE_2315 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781236.1 2559557 D 316055 CDS YP_781237.1 115524326 4359136 2559965..2560495 1 NC_008435.1 KEGG: rpc:RPC_3140 hypothetical protein; hypothetical protein 2560495 4359136 RPE_2316 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781237.1 2559965 D 316055 CDS YP_781238.1 115524327 4359137 complement(2560524..2560682) 1 NC_008435.1 KEGG: rpc:RPC_3139 hypothetical protein; hypothetical protein 2560682 4359137 RPE_2317 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781238.1 2560524 R 316055 CDS YP_781239.1 115524328 4359138 complement(2560679..2560897) 1 NC_008435.1 KEGG: bja:blr5580 hypothetical protein; hypothetical protein 2560897 4359138 RPE_2318 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781239.1 2560679 R 316055 CDS YP_781240.1 115524329 4359139 complement(2561096..2562574) 1 NC_008435.1 PFAM: porin; KEGG: rpc:RPC_2891 putative Omp2b porin; porin 2562574 4359139 RPE_2319 Rhodopseudomonas palustris BisA53 porin YP_781240.1 2561096 R 316055 CDS YP_781241.1 115524330 4359140 2563187..2563744 1 NC_008435.1 PFAM: regulatory protein, MarR; KEGG: rpc:RPC_3135 transcriptional regulator, MarR family; MarR family transcriptional regulator 2563744 4359140 RPE_2320 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_781241.1 2563187 D 316055 CDS YP_781242.1 115524331 4359141 2563767..2564009 1 NC_008435.1 hypothetical protein 2564009 4359141 RPE_2321 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781242.1 2563767 D 316055 CDS YP_781243.1 115524332 4359142 2563990..2564259 1 NC_008435.1 hypothetical protein 2564259 4359142 RPE_2322 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781243.1 2563990 D 316055 CDS YP_781244.1 115524333 4359143 complement(2564252..2564923) 1 NC_008435.1 PFAM: autoinducer synthesis protein; KEGG: bja:blr1063 putative autoinducer synthase; autoinducer synthesis protein 2564923 4359143 RPE_2323 Rhodopseudomonas palustris BisA53 autoinducer synthesis protein YP_781244.1 2564252 R 316055 CDS YP_781245.1 115524334 4359144 complement(2565017..2565757) 1 NC_008435.1 PFAM: regulatory protein, LuxR; Autoinducer-binding domain protein; KEGG: bja:blr1062 transcriptional regulatory protein; LuxR family transcriptional regulator 2565757 4359144 RPE_2324 Rhodopseudomonas palustris BisA53 LuxR family transcriptional regulator YP_781245.1 2565017 R 316055 CDS YP_781246.1 115524335 4359145 complement(2566197..2566820) 1 NC_008435.1 PFAM: transglutaminase family protein cysteine peptidase, BTLCP; KEGG: rpc:RPC_3134 transglutaminase-like cysteine peptidase, BTLCP; transglutaminase-like cysteine peptidase, BTLCP 2566820 4359145 RPE_2325 Rhodopseudomonas palustris BisA53 transglutaminase-like cysteine peptidase, BTLCP YP_781246.1 2566197 R 316055 CDS YP_781247.1 115524336 4359146 complement(2567151..2567819) 1 NC_008435.1 PFAM: type IV pilus assembly PilZ; KEGG: rpc:RPC_3133 type IV pilus assembly PilZ; type IV pilus assembly PilZ 2567819 4359146 RPE_2326 Rhodopseudomonas palustris BisA53 type IV pilus assembly PilZ YP_781247.1 2567151 R 316055 CDS YP_781248.1 115524337 4359148 2570083..2570814 1 NC_008435.1 PFAM: cyclic nucleotide-binding; KEGG: rpc:RPC_3375 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein 2570814 4359148 RPE_2328 Rhodopseudomonas palustris BisA53 cyclic nucleotide-binding protein YP_781248.1 2570083 D 316055 CDS YP_781249.1 115524338 4359149 complement(2570827..2571375) 1 NC_008435.1 KEGG: nha:Nham_1646 hypothetical protein; hypothetical protein 2571375 4359149 RPE_2329 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781249.1 2570827 R 316055 CDS YP_781250.1 115524339 4359150 2571888..2572643 1 NC_008435.1 PFAM: Rhomboid family protein; KEGG: rpc:RPC_3129 rhomboid-like protein; rhomboid-like protein 2572643 4359150 RPE_2330 Rhodopseudomonas palustris BisA53 rhomboid-like protein YP_781250.1 2571888 D 316055 CDS YP_781251.1 115524340 4359151 2572872..2573300 1 NC_008435.1 PFAM: CBS domain containing protein; KEGG: rpc:RPC_3128 putative signal-transduction protein with CBS domains; signal-transduction protein 2573300 4359151 RPE_2331 Rhodopseudomonas palustris BisA53 signal-transduction protein YP_781251.1 2572872 D 316055 CDS YP_781252.1 115524341 4359152 complement(2573324..2574346) 1 NC_008435.1 PFAM: Patatin; KEGG: rpc:RPC_3127 patatin; patatin 2574346 4359152 RPE_2332 Rhodopseudomonas palustris BisA53 patatin YP_781252.1 2573324 R 316055 CDS YP_781253.1 115524342 4359153 2574536..2575609 1 NC_008435.1 KEGG: rpc:RPC_3126 hypothetical protein; hypothetical protein 2575609 4359153 RPE_2333 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781253.1 2574536 D 316055 CDS YP_781254.1 115524343 4359154 2575821..2578325 1 NC_008435.1 KEGG: rpc:RPC_3125 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2578325 4359154 RPE_2334 Rhodopseudomonas palustris BisA53 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_781254.1 2575821 D 316055 CDS YP_781255.1 115524344 4359155 complement(2578330..2578893) 1 NC_008435.1 PFAM: nitroreductase; KEGG: bja:blr5540 hypothetical protein; nitroreductase 2578893 4359155 RPE_2335 Rhodopseudomonas palustris BisA53 nitroreductase YP_781255.1 2578330 R 316055 CDS YP_781256.1 115524345 4359156 complement(2579070..2579288) 1 NC_008435.1 KEGG: rpc:RPC_3122 hypothetical protein; hypothetical protein 2579288 4359156 RPE_2336 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781256.1 2579070 R 316055 CDS YP_781257.1 115524346 4359157 complement(2579285..2581324) 1 NC_008435.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2581324 thrS 4359157 thrS Rhodopseudomonas palustris BisA53 threonyl-tRNA synthetase YP_781257.1 2579285 R 316055 CDS YP_781258.1 115524347 4359192 complement(2581531..2582580) 1 NC_008435.1 hypothetical protein 2582580 4359192 RPE_2338 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781258.1 2581531 R 316055 CDS YP_781259.1 115524348 4359193 2582768..2583892 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll5536 major facilitator superfamily transporter; major facilitator transporter 2583892 4359193 RPE_2339 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_781259.1 2582768 D 316055 CDS YP_781260.1 115524349 4359194 complement(2583922..2584584) 1 NC_008435.1 PFAM: O-methyltransferase, family 3; KEGG: rpa:RPA3404 putative O-methyltransferase; O-methyltransferase family protein 2584584 4359194 RPE_2340 Rhodopseudomonas palustris BisA53 O-methyltransferase family protein YP_781260.1 2583922 R 316055 CDS YP_781261.1 115524350 4359195 2584677..2585309 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpa:RPA3403 possible transcriptional regulator, TetR family; TetR family transcriptional regulator 2585309 4359195 RPE_2341 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_781261.1 2584677 D 316055 CDS YP_781262.1 115524351 4359196 2585302..2585721 1 NC_008435.1 KEGG: rpa:RPA3402 hypothetical protein; hypothetical protein 2585721 4359196 RPE_2342 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781262.1 2585302 D 316055 CDS YP_781263.1 115524352 4359197 complement(2585718..2586047) 1 NC_008435.1 PFAM: protein of unknown function DUF37; KEGG: rpc:RPC_3117 protein of unknown function DUF37; hypothetical protein 2586047 4359197 RPE_2343 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781263.1 2585718 R 316055 CDS YP_781264.1 115524353 4359198 2586157..2587215 1 NC_008435.1 KEGG: rpc:RPC_3116 hypothetical protein; hypothetical protein 2587215 4359198 RPE_2344 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781264.1 2586157 D 316055 CDS YP_781265.1 115524354 4359199 2587331..2587993 1 NC_008435.1 KEGG: gvi:glr0057 unknown protein; hypothetical protein 2587993 4359199 RPE_2345 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781265.1 2587331 D 316055 CDS YP_781266.1 115524355 4359200 2587993..2588286 1 NC_008435.1 hypothetical protein 2588286 4359200 RPE_2346 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781266.1 2587993 D 316055 CDS YP_781267.1 115524356 4359201 complement(2588299..2588778) 1 NC_008435.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: rpc:RPC_3115 nitrogen-fixing NifU-like; NifU domain-containing protein 2588778 4359201 RPE_2347 Rhodopseudomonas palustris BisA53 NifU domain-containing protein YP_781267.1 2588299 R 316055 CDS YP_781268.1 115524357 4359202 2589017..2589697 1 NC_008435.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 2589697 folE 4359202 folE Rhodopseudomonas palustris BisA53 GTP cyclohydrolase I YP_781268.1 2589017 D 316055 CDS YP_781269.1 115524358 4359203 2589916..2590359 1 NC_008435.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 2590359 hisI 4359203 hisI Rhodopseudomonas palustris BisA53 phosphoribosyl-AMP cyclohydrolase YP_781269.1 2589916 D 316055 CDS YP_781270.1 115524359 4359204 complement(2590389..2590754) 1 NC_008435.1 PFAM: cytochrome b5; KEGG: rpc:RPC_1930 cytochrome b5; cytochrome b5 2590754 4359204 RPE_2350 Rhodopseudomonas palustris BisA53 cytochrome b5 YP_781270.1 2590389 R 316055 CDS YP_781271.1 115524360 4359205 complement(2590751..2592016) 1 NC_008435.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: rpc:RPC_1929 ferric reductase-like transmembrane component-like; ferric reductase domain-containing protein 2592016 4359205 RPE_2351 Rhodopseudomonas palustris BisA53 ferric reductase domain-containing protein YP_781271.1 2590751 R 316055 CDS YP_781272.1 115524361 4359206 complement(2592022..2592327) 1 NC_008435.1 KEGG: rpc:RPC_1928 hypothetical protein; hypothetical protein 2592327 4359206 RPE_2352 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781272.1 2592022 R 316055 CDS YP_781273.1 115524362 4359207 complement(2592453..2593124) 1 NC_008435.1 KEGG: rpc:RPC_3112 hypothetical protein; hypothetical protein 2593124 4359207 RPE_2353 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781273.1 2592453 R 316055 CDS YP_781274.1 115524363 4359208 2593343..2594392 1 NC_008435.1 KEGG: rpc:RPC_3111 hypothetical protein; hypothetical protein 2594392 4359208 RPE_2354 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781274.1 2593343 D 316055 CDS YP_781275.1 115524364 4359209 2594899..2596074 1 NC_008435.1 KEGG: rpc:RPC_3110 hypothetical protein; hypothetical protein 2596074 4359209 RPE_2355 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781275.1 2594899 D 316055 CDS YP_781276.1 115524365 4359210 complement(2596337..2596915) 1 NC_008435.1 PFAM: Hpt domain protein; KEGG: rpc:RPC_3109 Hpt domain protein; Hpt protein 2596915 4359210 RPE_2356 Rhodopseudomonas palustris BisA53 Hpt protein YP_781276.1 2596337 R 316055 CDS YP_781277.1 115524366 4359211 complement(2596933..2597478) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_3108 response regulator receiver domain protein (CheY-like); response regulator receiver protein 2597478 4359211 RPE_2357 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_781277.1 2596933 R 316055 CDS YP_781278.1 115524367 4359212 2597754..2599517 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: rpb:RPB_4125 diguanylate cyclase; diguanylate cyclase 2599517 4359212 RPE_2358 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_781278.1 2597754 D 316055 CDS YP_781279.1 115524368 4359213 complement(2599751..2600530) 1 NC_008435.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 2600530 ppnK 4359213 ppnK Rhodopseudomonas palustris BisA53 inorganic polyphosphate/ATP-NAD kinase YP_781279.1 2599751 R 316055 CDS YP_781280.1 115524369 4359214 complement(2600648..2601208) 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5512 hypothetical protein; TPR repeat-containing protein 2601208 4359214 RPE_2360 Rhodopseudomonas palustris BisA53 TPR repeat-containing protein YP_781280.1 2600648 R 316055 CDS YP_781281.1 115524370 4359215 2601410..2601823 1 NC_008435.1 KEGG: nwi:Nwi_1336 hypothetical protein; hypothetical protein 2601823 4359215 RPE_2361 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781281.1 2601410 D 316055 CDS YP_781282.1 115524371 4359216 2601979..2602686 1 NC_008435.1 PFAM: OmpA domain protein transmembrane region-containing protein; porin; KEGG: rpc:RPC_3103 OmpA-like transmembrane region; OmpA domain-containing protein 2602686 4359216 RPE_2362 Rhodopseudomonas palustris BisA53 OmpA domain-containing protein YP_781282.1 2601979 D 316055 CDS YP_781283.1 115524372 4359217 2603270..2603479 1 NC_008435.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rpa:RPA3399 cold shock DNA binding protein; cold-shock DNA-binding domain-containing protein 2603479 4359217 RPE_2363 Rhodopseudomonas palustris BisA53 cold-shock DNA-binding domain-containing protein YP_781283.1 2603270 D 316055 CDS YP_781284.1 115524373 4359218 2603579..2603818 1 NC_008435.1 KEGG: rpa:RPA3400 hypothetical protein; hypothetical protein 2603818 4359218 RPE_2364 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781284.1 2603579 D 316055 CDS YP_781285.1 115524374 4359219 2603851..2604051 1 NC_008435.1 KEGG: rpb:RPB_2174 hypothetical protein; hypothetical protein 2604051 4359219 RPE_2365 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781285.1 2603851 D 316055 CDS YP_781286.1 115524375 4359220 complement(2604194..2604544) 1 NC_008435.1 hypothetical protein 2604544 4359220 RPE_2366 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781286.1 2604194 R 316055 CDS YP_781287.1 115524376 4359221 complement(2604669..2605868) 1 NC_008435.1 PFAM: protein of unknown function DUF303, acetylesterase putative; KEGG: ret:RHE_CH02651 hypothetical protein; hypothetical protein 2605868 4359221 RPE_2367 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781287.1 2604669 R 316055 CDS YP_781288.1 115524377 4359222 2605956..2607371 1 NC_008435.1 KEGG: ana:alr2841 unknown protein; hypothetical protein 2607371 4359222 RPE_2368 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781288.1 2605956 D 316055 CDS YP_781289.1 115524378 4359223 complement(2607390..2608451) 1 NC_008435.1 PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B1814 acyltransferase 3; acyltransferase 3 2608451 4359223 RPE_2369 Rhodopseudomonas palustris BisA53 acyltransferase 3 YP_781289.1 2607390 R 316055 CDS YP_781290.1 115524379 4359225 2609090..2609551 1 NC_008435.1 KEGG: rpc:RPC_3102 hypothetical protein; hypothetical protein 2609551 4359225 RPE_2370 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781290.1 2609090 D 316055 CDS YP_781291.1 115524380 4359226 2609581..2610087 1 NC_008435.1 KEGG: rpc:RPC_3101 hypothetical protein; hypothetical protein 2610087 4359226 RPE_2371 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781291.1 2609581 D 316055 CDS YP_781292.1 115524381 4359227 2610272..2611438 1 NC_008435.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2611438 4359227 RPE_2372 Rhodopseudomonas palustris BisA53 acetyl-CoA acetyltransferase YP_781292.1 2610272 D 316055 CDS YP_781293.1 115524382 4359228 2611466..2612995 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA3465 putative long-chain-fatty-acid CoA ligase; AMP-dependent synthetase and ligase 2612995 4359228 RPE_2373 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_781293.1 2611466 D 316055 CDS YP_781294.1 115524383 4359229 complement(2613139..2614473) 1 NC_008435.1 KEGG: rpb:RPB_2103 hypothetical protein; hypothetical protein 2614473 4359229 RPE_2374 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781294.1 2613139 R 316055 CDS YP_781295.1 115524384 4359230 2614572..2616656 1 NC_008435.1 PFAM: CoA-binding domain protein; KEGG: rpd:RPD_3312 CoA-binding; CoA-binding domain-containing protein 2616656 4359230 RPE_2375 Rhodopseudomonas palustris BisA53 CoA-binding domain-containing protein YP_781295.1 2614572 D 316055 CDS YP_781296.1 115524385 4359231 2616733..2617608 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_2983 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2617608 4359231 RPE_2376 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_781296.1 2616733 D 316055 CDS YP_781297.1 115524386 4359232 2618645..2619406 1 NC_008435.1 hypothetical protein 2619406 4359232 RPE_2377 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781297.1 2618645 D 316055 CDS YP_781298.1 115524387 4359233 complement(2619742..2619966) 1 NC_008435.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: bja:bsl3938 putative biotinylated protein; biotin/lipoyl attachment domain-containing protein 2619966 4359233 RPE_2378 Rhodopseudomonas palustris BisA53 biotin/lipoyl attachment domain-containing protein YP_781298.1 2619742 R 316055 CDS YP_781299.1 115524388 4359235 2621114..2622670 1 NC_008435.1 PFAM: carboxyl transferase; KEGG: rpc:RPC_3097 propionyl-CoA carboxylase; propionyl-CoA carboxylase 2622670 4359235 RPE_2380 Rhodopseudomonas palustris BisA53 propionyl-CoA carboxylase YP_781299.1 2621114 D 316055 CDS YP_781300.1 115524389 4359236 2622781..2623464 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_3096 transcriptional regulator, TetR family; TetR family transcriptional regulator 2623464 4359236 RPE_2381 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_781300.1 2622781 D 316055 CDS YP_781301.1 115524390 4359237 2623633..2625129 1 NC_008435.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: rpc:RPC_3095 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 2625129 4359237 RPE_2382 Rhodopseudomonas palustris BisA53 methylmalonate-semialdehyde dehydrogenase YP_781301.1 2623633 D 316055 CDS YP_781302.1 115524391 4359238 2625164..2625391 1 NC_008435.1 KEGG: rpb:RPB_2118 hypothetical protein; hypothetical protein 2625391 4359238 RPE_2383 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781302.1 2625164 D 316055 CDS YP_781303.1 115524392 4359239 2625445..2625816 1 NC_008435.1 KEGG: rpb:RPB_2119 PilT protein-like; PilT protein-like protein 2625816 4359239 RPE_2384 Rhodopseudomonas palustris BisA53 PilT protein-like protein YP_781303.1 2625445 D 316055 CDS YP_781304.1 115524393 4359240 2625813..2626961 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_2120 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 2626961 4359240 RPE_2385 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_781304.1 2625813 D 316055 CDS YP_781305.1 115524394 4359241 2626958..2628043 1 NC_008435.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 2628043 4359241 RPE_2386 Rhodopseudomonas palustris BisA53 3-hydroxyisobutyryl-CoA hydrolase YP_781305.1 2626958 D 316055 CDS YP_781306.1 115524395 4359242 2628077..2628964 1 NC_008435.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: rpa:RPA3446 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 2628964 4359242 RPE_2387 Rhodopseudomonas palustris BisA53 3-hydroxyisobutyrate dehydrogenase YP_781306.1 2628077 D 316055 CDS YP_781307.1 115524396 4359645 2629140..2630864 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA3445 probable acetyl-CoA synthetase; AMP-dependent synthetase and ligase 2630864 4359645 RPE_2388 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_781307.1 2629140 D 316055 CDS YP_781308.1 115524397 4359646 2630944..2631438 1 NC_008435.1 PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_3089 MaoC-like dehydratase; dehydratase 2631438 4359646 RPE_2389 Rhodopseudomonas palustris BisA53 dehydratase YP_781308.1 2630944 D 316055 CDS YP_781309.1 115524398 4359647 2631457..2632374 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_3088 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2632374 4359647 RPE_2390 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_781309.1 2631457 D 316055 CDS YP_781310.1 115524399 4359648 2632625..2633857 1 NC_008435.1 PFAM: HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_3087 HI0933-like protein; hypothetical protein 2633857 4359648 RPE_2391 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781310.1 2632625 D 316055 CDS YP_781311.1 115524400 4359649 complement(2634030..2635850) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_3086 ABC transporter related; ABC transporter-like protein 2635850 4359649 RPE_2392 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_781311.1 2634030 R 316055 CDS YP_781312.1 115524401 4359650 complement(2635856..2636413) 1 NC_008435.1 PFAM: protein of unknown function DUF188; KEGG: rpd:RPD_2254 protein of unknown function DUF188; hypothetical protein 2636413 4359650 RPE_2393 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781312.1 2635856 R 316055 CDS YP_781313.1 115524402 4359651 complement(2636553..2639594) 1 NC_008435.1 TIGRFAM: outer membrane autotransporter barrel domain; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Autotransporter beta- domain protein; KEGG: rpb:RPB_3437 outer membrane autotransporter; outer membrane autotransporter 2639594 4359651 RPE_2394 Rhodopseudomonas palustris BisA53 outer membrane autotransporter YP_781313.1 2636553 R 316055 CDS YP_781314.1 115524403 4359652 complement(2639789..2640358) 1 NC_008435.1 KEGG: rpc:RPC_2342 hypothetical protein; hypothetical protein 2640358 4359652 RPE_2395 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781314.1 2639789 R 316055 CDS YP_781315.1 115524404 4359653 complement(2640392..2641396) 1 NC_008435.1 PFAM: polysaccharide deacetylase; KEGG: rpc:RPC_2343 polysaccharide deacetylase; polysaccharide deacetylase 2641396 4359653 RPE_2396 Rhodopseudomonas palustris BisA53 polysaccharide deacetylase YP_781315.1 2640392 R 316055 CDS YP_781316.1 115524405 4359654 complement(2641549..2642124) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: glutathione peroxidase; KEGG: bja:bll4149 putative glutathione peroxidase; glutathione peroxidase 2642124 4359654 RPE_2397 Rhodopseudomonas palustris BisA53 glutathione peroxidase YP_781316.1 2641549 R 316055 CDS YP_781317.1 115524406 4359655 complement(2642202..2643713) 1 NC_008435.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_2344 ErfK/YbiS/YcfS/YnhG; hypothetical protein 2643713 4359655 RPE_2398 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781317.1 2642202 R 316055 CDS YP_781318.1 115524407 4359656 2643931..2644476 1 NC_008435.1 PFAM: CreA family protein; KEGG: rpc:RPC_2345 CreA; CreA family protein 2644476 4359656 RPE_2399 Rhodopseudomonas palustris BisA53 CreA family protein YP_781318.1 2643931 D 316055 CDS YP_781319.1 115524408 4359657 2644839..2645384 1 NC_008435.1 hypothetical protein 2645384 4359657 RPE_2400 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781319.1 2644839 D 316055 CDS YP_781320.1 115524409 4359658 2645411..2645818 1 NC_008435.1 KEGG: rpc:RPC_2347 hypothetical protein; hypothetical protein 2645818 4359658 RPE_2401 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781320.1 2645411 D 316055 CDS YP_781321.1 115524410 4359659 complement(2645865..2646509) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rpc:RPC_2348 putative signal transduction histidine kinase; putative signal transduction histidine kinase 2646509 4359659 RPE_2402 Rhodopseudomonas palustris BisA53 putative signal transduction histidine kinase YP_781321.1 2645865 R 316055 CDS YP_781322.1 115524411 4359660 complement(2646743..2647039) 1 NC_008435.1 KEGG: rpd:RPD_2939 hypothetical protein; hypothetical protein 2647039 4359660 RPE_2403 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781322.1 2646743 R 316055 CDS YP_781323.1 115524412 4359661 2647391..2647789 1 NC_008435.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rpa:RPA3032 phenylacetic acid degradation-related protein; hypothetical protein 2647789 4359661 RPE_2404 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781323.1 2647391 D 316055 CDS YP_781324.1 115524413 4359662 2648113..2648727 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_2354 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2648727 4359662 RPE_2405 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_781324.1 2648113 D 316055 CDS YP_781325.1 115524414 4359663 complement(2648856..2649155) 1 NC_008435.1 KEGG: rpc:RPC_2355 hypothetical protein; hypothetical protein 2649155 4359663 RPE_2406 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781325.1 2648856 R 316055 CDS YP_781326.1 115524415 4359664 2649563..2650087 1 NC_008435.1 PFAM: MgtC/SapB transporter; KEGG: pcr:Pcryo_2508 MgtC/SapB transporter; MgtC/SapB transporter 2650087 4359664 RPE_2407 Rhodopseudomonas palustris BisA53 MgtC/SapB transporter YP_781326.1 2649563 D 316055 CDS YP_781327.1 115524416 4359665 complement(2650090..2650560) 1 NC_008435.1 KEGG: rpc:RPC_2357 hypothetical protein; hypothetical protein 2650560 4359665 RPE_2408 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781327.1 2650090 R 316055 CDS YP_781328.1 115524417 4359666 2650686..2651576 1 NC_008435.1 PFAM: Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: rpc:RPC_2358 Sel1; Sel1 domain-containing protein 2651576 4359666 RPE_2409 Rhodopseudomonas palustris BisA53 Sel1 domain-containing protein YP_781328.1 2650686 D 316055 CDS YP_781329.1 115524418 4359667 complement(2651598..2651876) 1 NC_008435.1 hypothetical protein 2651876 4359667 RPE_2410 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781329.1 2651598 R 316055 CDS YP_781330.1 115524419 4359668 2651952..2652194 1 NC_008435.1 KEGG: rpa:RPA2732 hypothetical protein; hypothetical protein 2652194 4359668 RPE_2411 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781330.1 2651952 D 316055 CDS YP_781331.1 115524420 4359669 complement(2652222..2652983) 1 NC_008435.1 KEGG: rpc:RPC_2360 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 2652983 4359669 RPE_2412 Rhodopseudomonas palustris BisA53 protein tyrosine/serine phosphatase YP_781331.1 2652222 R 316055 CDS YP_781332.1 115524421 4359670 complement(2653032..2653637) 1 NC_008435.1 PFAM: Abortive infection protein; KEGG: rpc:RPC_2361 abortive infection protein; abortive infection protein 2653637 4359670 RPE_2413 Rhodopseudomonas palustris BisA53 abortive infection protein YP_781332.1 2653032 R 316055 CDS YP_781333.1 115524422 4359671 complement(2653687..2653926) 1 NC_008435.1 KEGG: rpb:RPB_2514 hypothetical protein; hypothetical protein 2653926 4359671 RPE_2414 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781333.1 2653687 R 316055 CDS YP_781334.1 115524423 4359672 complement(2653994..2655433) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: rpa:RPA2292 sensor histidine kinase; multi-sensor signal transduction histidine kinase 2655433 4359672 RPE_2415 Rhodopseudomonas palustris BisA53 multi-sensor signal transduction histidine kinase YP_781334.1 2653994 R 316055 CDS YP_781335.1 115524424 4359673 2655629..2656219 1 NC_008435.1 PFAM: NADPH-dependent FMN reductase; KEGG: rpb:RPB_2517 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2656219 4359673 RPE_2416 Rhodopseudomonas palustris BisA53 NADPH-dependent FMN reductase YP_781335.1 2655629 D 316055 CDS YP_781336.1 115524425 4359674 complement(2656283..2657248) 1 NC_008435.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sme:SMc04167 putative histidine-rich transporter transmembrane protein; cation diffusion facilitator family transporter 2657248 4359674 RPE_2417 Rhodopseudomonas palustris BisA53 cation diffusion facilitator family transporter YP_781336.1 2656283 R 316055 CDS YP_781337.1 115524426 4359675 2657724..2658248 1 NC_008435.1 KEGG: rpc:RPC_2366 hypothetical protein; hypothetical protein 2658248 4359675 RPE_2418 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781337.1 2657724 D 316055 CDS YP_781338.1 115524427 4359676 2658412..2658675 1 NC_008435.1 hypothetical protein 2658675 4359676 RPE_2419 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781338.1 2658412 D 316055 CDS YP_781339.1 115524428 4359677 2658986..2659198 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpa:RPA4292 light harvesting protein B-800-850, alpha chain B (antenna pigment protein, alpha chain B) (LH II-B alpha); antenna complex subunit alpha/beta 2659198 4359677 RPE_2420 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_781339.1 2658986 D 316055 CDS YP_781340.1 115524429 4359678 complement(2660493..2660795) 1 NC_008435.1 hypothetical protein 2660795 4359678 RPE_2421 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781340.1 2660493 R 316055 CDS YP_781341.1 115524430 4359679 complement(2661064..2661750) 1 NC_008435.1 hypothetical protein 2661750 4359679 RPE_2422 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781341.1 2661064 R 316055 CDS YP_781342.1 115524431 4359680 complement(2661929..2662183) 1 NC_008435.1 KEGG: rpb:RPB_2524 hypothetical protein; hypothetical protein 2662183 4359680 RPE_2423 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781342.1 2661929 R 316055 CDS YP_781343.1 115524432 4359681 complement(2662180..2662380) 1 NC_008435.1 KEGG: rpb:RPB_2525 hypothetical protein; hypothetical protein 2662380 4359681 RPE_2424 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781343.1 2662180 R 316055 CDS YP_781344.1 115524433 4359682 complement(2662582..2662902) 1 NC_008435.1 KEGG: bja:bsr7707 hypothetical protein; hypothetical protein 2662902 4359682 RPE_2425 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781344.1 2662582 R 316055 CDS YP_781345.1 115524434 4359683 complement(2662985..2663230) 1 NC_008435.1 KEGG: rpc:RPC_4897 hypothetical protein; hypothetical protein 2663230 4359683 RPE_2426 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781345.1 2662985 R 316055 CDS YP_781346.1 115524435 4359684 complement(2663400..2664434) 1 NC_008435.1 KEGG: nha:Nham_1812 hypothetical protein; hypothetical protein 2664434 4359684 RPE_2427 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781346.1 2663400 R 316055 CDS YP_781347.1 115524436 4359685 complement(2664872..2666434) 1 NC_008435.1 KEGG: rpb:RPB_2536 hypothetical protein; hypothetical protein 2666434 4359685 RPE_2428 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781347.1 2664872 R 316055 CDS YP_781348.1 115524437 4359686 complement(2666741..2667856) 1 NC_008435.1 KEGG: rpb:RPB_2537 hypothetical protein; hypothetical protein 2667856 4359686 RPE_2429 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781348.1 2666741 R 316055 CDS YP_781349.1 115524438 4359687 complement(2667838..2670000) 1 NC_008435.1 PFAM: Integrase, catalytic region; KEGG: bmb:BruAb1_0746 transposase, hypothetical; integrase catalytic subunit 2670000 4359687 RPE_2430 Rhodopseudomonas palustris BisA53 integrase catalytic subunit YP_781349.1 2667838 R 316055 CDS YP_781350.1 115524439 4359688 complement(2670000..2670239) 1 NC_008435.1 hypothetical protein 2670239 4359688 RPE_2431 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781350.1 2670000 R 316055 CDS YP_781351.1 115524440 4359689 2670318..2670605 1 NC_008435.1 hypothetical protein 2670605 4359689 RPE_2432 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781351.1 2670318 D 316055 CDS YP_781352.1 115524441 4359690 complement(2672186..2672950) 1 NC_008435.1 KEGG: hypothetical protein; hypothetical protein 2672950 4359690 RPE_2433 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781352.1 2672186 R 316055 CDS YP_781353.1 115524442 4359691 complement(2673192..2673539) 1 NC_008435.1 hypothetical protein 2673539 4359691 RPE_2434 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781353.1 2673192 R 316055 CDS YP_781354.1 115524443 4359692 2674165..2674563 1 NC_008435.1 PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr0034 putative transposase; transposase IS3/IS911 family protein 2674563 4359692 RPE_2435 Rhodopseudomonas palustris BisA53 transposase IS3/IS911 family protein YP_781354.1 2674165 D 316055 CDS YP_781355.1 115524444 4359693 2674560..2674907 1 NC_008435.1 PFAM: IS66 Orf2 family protein; KEGG: mag:amb0402 transposase and inactivated derivative; IS66 Orf2 family protein 2674907 4359693 RPE_2436 Rhodopseudomonas palustris BisA53 IS66 Orf2 family protein YP_781355.1 2674560 D 316055 CDS YP_781356.1 115524445 4359694 2674981..2676567 1 NC_008435.1 PFAM: transposase IS66; KEGG: mag:amb3325 transposase and inactivated derivative; transposase IS66 2676567 4359694 RPE_2437 Rhodopseudomonas palustris BisA53 transposase IS66 YP_781356.1 2674981 D 316055 CDS YP_781357.1 115524446 4359695 complement(2676801..2678156) 1 NC_008435.1 hypothetical protein 2678156 4359695 RPE_2438 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781357.1 2676801 R 316055 CDS YP_781358.1 115524447 4359696 complement(2678844..2680826) 1 NC_008435.1 PFAM: peptidase M41; AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: mag:amb1687 ATP-dependent Zn protease; ATPase central domain-containing protein 2680826 4359696 RPE_2439 Rhodopseudomonas palustris BisA53 ATPase central domain-containing protein YP_781358.1 2678844 R 316055 CDS YP_781359.1 115524448 4359697 complement(2680848..2681186) 1 NC_008435.1 hypothetical protein 2681186 4359697 RPE_2440 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781359.1 2680848 R 316055 CDS YP_781360.1 115524449 4358138 complement(2681363..2681815) 1 NC_008435.1 hypothetical protein 2681815 4358138 RPE_2441 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781360.1 2681363 R 316055 CDS YP_781361.1 115524450 4358139 2682076..2682321 1 NC_008435.1 PFAM: helix-turn-helix domain protein; KEGG: ret:RHE_CH00634 hypothetical protein; XRE family transcriptional regulator 2682321 4358139 RPE_2442 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_781361.1 2682076 D 316055 CDS YP_781362.1 115524451 4358140 2682568..2683581 1 NC_008435.1 KEGG: nha:Nham_4457 hypothetical protein; hypothetical protein 2683581 4358140 RPE_2443 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781362.1 2682568 D 316055 CDS YP_781363.1 115524452 4358141 2683578..2684066 1 NC_008435.1 KEGG: nha:Nham_4458 putative threonine efflux protein; putative threonine efflux protein 2684066 4358141 RPE_2444 Rhodopseudomonas palustris BisA53 putative threonine efflux protein YP_781363.1 2683578 D 316055 CDS YP_781364.1 115524453 4358142 2684063..2685949 1 NC_008435.1 KEGG: nha:Nham_4459 hypothetical protein; hypothetical protein 2685949 4358142 RPE_2445 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781364.1 2684063 D 316055 CDS YP_781365.1 115524454 4358143 2686492..2688891 1 NC_008435.1 KEGG: rpb:RPB_2541 hypothetical protein; hypothetical protein 2688891 4358143 RPE_2446 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781365.1 2686492 D 316055 CDS YP_781366.1 115524455 4358144 2688888..2690201 1 NC_008435.1 KEGG: rpb:RPB_2542 hypothetical protein; hypothetical protein 2690201 4358144 RPE_2447 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781366.1 2688888 D 316055 CDS YP_781367.1 115524456 4358145 2690170..2692422 1 NC_008435.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpb:RPB_2543 DEAD/DEAH box helicase; DEAD/DEAH box helicase 2692422 4358145 RPE_2448 Rhodopseudomonas palustris BisA53 DEAD/DEAH box helicase YP_781367.1 2690170 D 316055 CDS YP_781368.1 115524457 4358146 complement(2692803..2693693) 1 NC_008435.1 KEGG: rme:Rmet_6083 hypothetical protein; hypothetical protein 2693693 4358146 RPE_2449 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781368.1 2692803 R 316055 CDS YP_781369.1 115524458 4358147 complement(2693857..2694138) 1 NC_008435.1 KEGG: mlo:msr6604 hypothetical protein; hypothetical protein 2694138 4358147 RPE_2450 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781369.1 2693857 R 316055 CDS YP_781370.1 115524459 4358148 2695327..2696184 1 NC_008435.1 KEGG: rpc:RPC_1735 ABC-type phosphate transport system periplasmic component-like; ABC-type phosphate transport system periplasmic component-like protein 2696184 4358148 RPE_2451 Rhodopseudomonas palustris BisA53 ABC-type phosphate transport system periplasmic component-like protein YP_781370.1 2695327 D 316055 CDS YP_781371.1 115524460 4358149 2696181..2698520 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; KEGG: rpc:RPC_1734 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); diguanylate cyclase/phosphodiesterase 2698520 4358149 RPE_2452 Rhodopseudomonas palustris BisA53 diguanylate cyclase/phosphodiesterase YP_781371.1 2696181 D 316055 CDS YP_781372.1 115524461 4358150 complement(2698603..2698800) 1 NC_008435.1 KEGG: rpc:RPC_1545 hypothetical protein; hypothetical protein 2698800 4358150 RPE_2453 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781372.1 2698603 R 316055 CDS YP_781373.1 115524462 4358151 complement(2698904..2699422) 1 NC_008435.1 PFAM: BLUF domain protein; KEGG: rpa:RPA3367 possible activator of photopigment and puc with BLUF domain; BLUF domain-containing protein 2699422 4358151 RPE_2454 Rhodopseudomonas palustris BisA53 BLUF domain-containing protein YP_781373.1 2698904 R 316055 CDS YP_781374.1 115524463 4358152 complement(2699636..2699923) 1 NC_008435.1 hypothetical protein 2699923 4358152 RPE_2455 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781374.1 2699636 R 316055 CDS YP_781375.1 115524464 4358153 complement(2699939..2701672) 1 NC_008435.1 KEGG: pol:Bpro_5346 hypothetical protein; hypothetical protein 2701672 4358153 RPE_2456 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781375.1 2699939 R 316055 CDS YP_781376.1 115524465 4358154 complement(2701724..2701987) 1 NC_008435.1 hypothetical protein 2701987 4358154 RPE_2457 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781376.1 2701724 R 316055 CDS YP_781377.1 115524466 4358155 complement(2702039..2703739) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_1253 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2703739 4358155 RPE_2458 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_781377.1 2702039 R 316055 CDS YP_781378.1 115524467 4358156 2704426..2706126 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4407 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2706126 4358156 RPE_2459 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_781378.1 2704426 D 316055 CDS YP_781379.1 115524468 4358157 2706620..2708620 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpa:RPA3219 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL); diguanylate cyclase/phosphodiesterase 2708620 4358157 RPE_2460 Rhodopseudomonas palustris BisA53 diguanylate cyclase/phosphodiesterase YP_781379.1 2706620 D 316055 CDS YP_781380.1 115524469 4358158 2708643..2708795 1 NC_008435.1 KEGG: rpa:RPA4449 pmethyl-accepting chemotaxis receptor/sensory transducer; pmethyl-accepting chemotaxis receptor/sensory transducer 2708795 4358158 RPE_2461 Rhodopseudomonas palustris BisA53 pmethyl-accepting chemotaxis receptor/sensory transducer YP_781380.1 2708643 D 316055 CDS YP_781381.1 115524470 4358159 complement(2709333..2709692) 1 NC_008435.1 hypothetical protein 2709692 4358159 RPE_2462 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781381.1 2709333 R 316055 CDS YP_781382.1 115524471 4358160 complement(2709956..2710858) 1 NC_008435.1 PFAM: metallophosphoesterase; KEGG: sat:SYN_00526 calcineurin-like phosphoesterase; metallophosphoesterase 2710858 4358160 RPE_2463 Rhodopseudomonas palustris BisA53 metallophosphoesterase YP_781382.1 2709956 R 316055 CDS YP_781383.1 115524472 4358161 2711290..2713314 1 NC_008435.1 KEGG: gvi:gll4095 hypothetical protein; hypothetical protein 2713314 4358161 RPE_2464 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781383.1 2711290 D 316055 CDS YP_781384.1 115524473 4358162 complement(2713562..2714287) 1 NC_008435.1 KEGG: rme:Rmet_2339 hypothetical protein; hypothetical protein 2714287 4358162 RPE_2465 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781384.1 2713562 R 316055 CDS YP_781385.1 115524474 4358163 complement(2714318..2715214) 1 NC_008435.1 KEGG: rme:Rmet_2340 hypothetical protein; hypothetical protein 2715214 4358163 RPE_2466 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781385.1 2714318 R 316055 CDS YP_781386.1 115524475 4358164 complement(2715214..2715714) 1 NC_008435.1 KEGG: rme:Rmet_2341 hypothetical protein; hypothetical protein 2715714 4358164 RPE_2467 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781386.1 2715214 R 316055 CDS YP_781387.1 115524476 4358165 complement(2715711..2716187) 1 NC_008435.1 KEGG: pol:Bpro_5159 hypothetical protein; hypothetical protein 2716187 4358165 RPE_2468 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781387.1 2715711 R 316055 CDS YP_781388.1 115524477 4358166 complement(2716184..2717107) 1 NC_008435.1 PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rme:Rmet_2342 AAA ATPase, central region; ATPase central domain-containing protein 2717107 4358166 RPE_2469 Rhodopseudomonas palustris BisA53 ATPase central domain-containing protein YP_781388.1 2716184 R 316055 CDS YP_781389.1 115524478 4358167 complement(2717190..2717411) 1 NC_008435.1 KEGG: bja:bsr0071 hypothetical protein; hypothetical protein 2717411 4358167 RPE_2470 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781389.1 2717190 R 316055 CDS YP_781390.1 115524479 4358168 2717569..2717928 1 NC_008435.1 PFAM: helix-turn-helix domain protein; KEGG: bja:bll0070 hypothetical protein; XRE family transcriptional regulator 2717928 4358168 RPE_2471 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_781390.1 2717569 D 316055 CDS YP_781391.1 115524480 4358169 2717925..2718446 1 NC_008435.1 PFAM: protein of unknown function DUF955; KEGG: bja:bll0069 hypothetical protein; hypothetical protein 2718446 4358169 RPE_2472 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781391.1 2717925 D 316055 CDS YP_781392.1 115524481 4358170 2718462..2719934 1 NC_008435.1 KEGG: bja:bll0068 exonuclease I; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; exodeoxyribonuclease I 2719934 4358170 RPE_2473 Rhodopseudomonas palustris BisA53 exodeoxyribonuclease I YP_781392.1 2718462 D 316055 CDS YP_781393.1 115524482 4358171 complement(2720810..2721418) 1 NC_008435.1 KEGG: bja:bll4265 hypothetical protein; hypothetical protein 2721418 4358171 RPE_2474 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781393.1 2720810 R 316055 CDS YP_781394.1 115524483 4358172 complement(2722151..2724310) 1 NC_008435.1 KEGG: bja:bll4266 hypothetical protein; hypothetical protein 2724310 4358172 RPE_2475 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781394.1 2722151 R 316055 CDS YP_781395.1 115524484 4358173 complement(2724307..2724774) 1 NC_008435.1 KEGG: bja:bll4267 hypothetical protein; hypothetical protein 2724774 4358173 RPE_2476 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781395.1 2724307 R 316055 CDS YP_781396.1 115524485 4358174 complement(2724777..2725301) 1 NC_008435.1 KEGG: bja:bll4268 hypothetical protein; hypothetical protein 2725301 4358174 RPE_2477 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781396.1 2724777 R 316055 CDS YP_781397.1 115524486 4358175 complement(2725319..2727337) 1 NC_008435.1 PFAM: phage integrase family protein; KEGG: bja:bll4269 hypothetical protein; phage integrase family protein 2727337 4358175 RPE_2478 Rhodopseudomonas palustris BisA53 phage integrase family protein YP_781397.1 2725319 R 316055 CDS YP_781398.1 115524487 4358176 complement(2727315..2729204) 1 NC_008435.1 KEGG: bja:bll4270 hypothetical protein; hypothetical protein 2729204 4358176 RPE_2479 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781398.1 2727315 R 316055 CDS YP_781399.1 115524488 4358177 complement(2729242..2730492) 1 NC_008435.1 PFAM: phage integrase family protein; KEGG: bja:bll4271 hypothetical protein; phage integrase family protein 2730492 4358177 RPE_2480 Rhodopseudomonas palustris BisA53 phage integrase family protein YP_781399.1 2729242 R 316055 CDS YP_781400.1 115524489 4358179 complement(2732172..2732492) 1 NC_008435.1 hypothetical protein 2732492 4358179 RPE_2482 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781400.1 2732172 R 316055 CDS YP_781401.1 115524490 4358180 2732527..2735010 1 NC_008435.1 PFAM: SMC domain protein; KEGG: bja:bll1930 hypothetical protein; SMC domain-containing protein 2735010 4358180 RPE_2483 Rhodopseudomonas palustris BisA53 SMC domain-containing protein YP_781401.1 2732527 D 316055 CDS YP_781402.1 115524491 4358181 2735034..2737646 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: rpd:RPD_3368 ATP-binding region, ATPase-like; ATPase domain-containing protein 2737646 4358181 RPE_2484 Rhodopseudomonas palustris BisA53 ATPase domain-containing protein YP_781402.1 2735034 D 316055 CDS YP_781403.1 115524492 4358182 complement(2737735..2739645) 1 NC_008435.1 PFAM: peptidase M41; AAA ATPase, central domain protein; KEGG: mag:amb1687 ATP-dependent Zn protease; ATPase central domain-containing protein 2739645 4358182 RPE_2485 Rhodopseudomonas palustris BisA53 ATPase central domain-containing protein YP_781403.1 2737735 R 316055 CDS YP_781404.1 115524493 4358183 2739975..2740556 1 NC_008435.1 hypothetical protein 2740556 4358183 RPE_2486 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781404.1 2739975 D 316055 CDS YP_781405.1 115524494 4358184 2740996..2741259 1 NC_008435.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 2741259 4358184 RPE_2487 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_781405.1 2740996 D 316055 CDS YP_781406.1 115524495 4358185 complement(2742272..2743339) 1 NC_008435.1 KEGG: bja:bll2295 hypothetical protein; hypothetical protein 2743339 4358185 RPE_2488 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781406.1 2742272 R 316055 CDS YP_781407.1 115524496 4358186 2743946..2744797 1 NC_008435.1 KEGG: rsp:RSP_3808 hypothetical protein; hypothetical protein 2744797 4358186 RPE_2489 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781407.1 2743946 D 316055 CDS YP_781408.1 115524497 4358187 2745050..2745556 1 NC_008435.1 hypothetical protein 2745556 4358187 RPE_2490 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781408.1 2745050 D 316055 CDS YP_781409.1 115524498 4358188 2745658..2746320 1 NC_008435.1 hypothetical protein 2746320 4358188 RPE_2491 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781409.1 2745658 D 316055 CDS YP_781410.1 115524499 4358189 complement(2746839..2747885) 1 NC_008435.1 PFAM: Patatin; KEGG: rpd:RPD_2292 patatin; patatin 2747885 4358189 RPE_2492 Rhodopseudomonas palustris BisA53 patatin YP_781410.1 2746839 R 316055 CDS YP_781411.1 115524500 4360099 complement(2747882..2748358) 1 NC_008435.1 KEGG: pol:Bpro_1540 hypothetical protein; hypothetical protein 2748358 4360099 RPE_2493 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781411.1 2747882 R 316055 CDS YP_781412.1 115524501 4360100 complement(2748363..2749547) 1 NC_008435.1 KEGG: vvu:VV12027 hypothetical protein; hypothetical protein 2749547 4360100 RPE_2494 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781412.1 2748363 R 316055 CDS YP_781413.1 115524502 4360101 2749741..2750310 1 NC_008435.1 KEGG: gka:GK2254 DNA-directed RNA polymerase ECF-type sigma factor (sigma-X); ECF subfamily RNA polymerase sigma-24 factor 2750310 4360101 RPE_2495 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_781413.1 2749741 D 316055 CDS YP_781414.1 115524503 4360102 2750307..2750744 1 NC_008435.1 hypothetical protein 2750744 4360102 RPE_2496 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781414.1 2750307 D 316055 CDS YP_781415.1 115524504 4360103 2750746..2751513 1 NC_008435.1 PFAM: protein of unknown function DUF955; KEGG: rsp:RSP_4244 hypothetical protein; hypothetical protein 2751513 4360103 RPE_2497 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781415.1 2750746 D 316055 CDS YP_781416.1 115524505 4360104 complement(2751599..2753935) 1 NC_008435.1 KEGG: nha:Nham_0079 hypothetical protein; hypothetical protein 2753935 4360104 RPE_2498 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781416.1 2751599 R 316055 CDS YP_781417.1 115524506 4360105 complement(2754170..2754733) 1 NC_008435.1 KEGG: rpd:RPD_0028 hypothetical protein; hypothetical protein 2754733 4360105 RPE_2499 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781417.1 2754170 R 316055 CDS YP_781418.1 115524507 4360106 complement(2755266..2758286) 1 NC_008435.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; peptidase C14, caspase catalytic subunit p20; KEGG: sat:SYN_01854 helicase; DEAD/DEAH box helicase 2758286 4360106 RPE_2500 Rhodopseudomonas palustris BisA53 DEAD/DEAH box helicase YP_781418.1 2755266 R 316055 CDS YP_781419.1 115524508 4360107 complement(2758726..2762493) 1 NC_008435.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2762493 4360107 RPE_2501 Rhodopseudomonas palustris BisA53 ribonucleotide-diphosphate reductase subunit alpha YP_781419.1 2758726 R 316055 CDS YP_781420.1 115524509 4360108 2763164..2764063 1 NC_008435.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_2383 protein of unknown function DUF6, transmembrane; hypothetical protein 2764063 4360108 RPE_2502 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781420.1 2763164 D 316055 CDS YP_781421.1 115524510 4360109 2764325..2764849 1 NC_008435.1 KEGG: rpc:RPC_2385 hypothetical protein; hypothetical protein 2764849 4360109 RPE_2503 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781421.1 2764325 D 316055 CDS YP_781422.1 115524511 4360110 complement(2764907..2765518) 1 NC_008435.1 KEGG: rpd:RPD_2903 hypothetical protein; hypothetical protein 2765518 4360110 RPE_2504 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781422.1 2764907 R 316055 CDS YP_781423.1 115524512 4360111 complement(2765885..2767294) 1 NC_008435.1 KEGG: rpc:RPC_2386 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; glutamine synthetase, type I 2767294 4360111 RPE_2505 Rhodopseudomonas palustris BisA53 glutamine synthetase, type I YP_781423.1 2765885 R 316055 CDS YP_781424.1 115524513 4360112 complement(2767377..2767715) 1 NC_008435.1 PFAM: nitrogen regulatory protein P-II; KEGG: rpc:RPC_2387 nitrogen regulatory protein P-II (GlnB, GlnK); nitrogen regulatory protein P-II 2767715 4360112 RPE_2506 Rhodopseudomonas palustris BisA53 nitrogen regulatory protein P-II YP_781424.1 2767377 R 316055 CDS YP_781425.1 115524514 4360113 2768133..2769632 1 NC_008435.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: rpc:RPC_2388 protein of unknown function UPF0031; carbohydrate kinase, YjeF-like protein 2769632 4360113 RPE_2507 Rhodopseudomonas palustris BisA53 carbohydrate kinase, YjeF-like protein YP_781425.1 2768133 D 316055 CDS YP_781426.1 115524515 4360114 complement(2769640..2770950) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; KEGG: rpc:RPC_2390 twin-arginine translocation pathway signal; multicopper oxidase 2770950 4360114 RPE_2508 Rhodopseudomonas palustris BisA53 multicopper oxidase YP_781426.1 2769640 R 316055 CDS YP_781427.1 115524516 4360116 2771340..2772701 1 NC_008435.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2772701 tig 4360116 tig Rhodopseudomonas palustris BisA53 trigger factor YP_781427.1 2771340 D 316055 CDS YP_781428.1 115524517 4360117 2773059..2773694 1 NC_008435.1 PFAM: peptidase S14, ClpP; KEGG: rpb:RPB_2563 endopeptidase Clp; endopeptidase Clp 2773694 4360117 RPE_2510 Rhodopseudomonas palustris BisA53 endopeptidase Clp YP_781428.1 2773059 D 316055 CDS YP_781429.1 115524518 4360118 2774082..2775356 1 NC_008435.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2775356 clpX 4360118 clpX Rhodopseudomonas palustris BisA53 ATP-dependent protease ATP-binding subunit ClpX YP_781429.1 2774082 D 316055 CDS YP_781430.1 115524519 4360119 2775820..2778243 1 NC_008435.1 KEGG: rpc:RPC_2394 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 2778243 4360119 RPE_2512 Rhodopseudomonas palustris BisA53 ATP-dependent protease La YP_781430.1 2775820 D 316055 CDS YP_781431.1 115524520 4360120 2778470..2779234 1 NC_008435.1 hypothetical protein 2779234 4360120 RPE_2513 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781431.1 2778470 D 316055 CDS YP_781432.1 115524521 4360122 complement(2779477..2782620) 1 NC_008435.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpb:RPB_2567 hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family protein 2782620 4360122 RPE_2514 Rhodopseudomonas palustris BisA53 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_781432.1 2779477 R 316055 CDS YP_781433.1 115524522 4360123 complement(2782664..2783905) 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpb:RPB_2568 secretion protein HlyD; RND family efflux transporter MFP subunit 2783905 4360123 RPE_2515 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_781433.1 2782664 R 316055 CDS YP_781434.1 115524523 4360124 complement(2784114..2785385) 1 NC_008435.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2785385 4360124 RPE_2516 Rhodopseudomonas palustris BisA53 peptidase T YP_781434.1 2784114 R 316055 CDS YP_781435.1 115524524 4360125 complement(2785475..2785786) 1 NC_008435.1 PFAM: histone family protein DNA-binding protein; KEGG: rpb:RPB_2570 histone-like DNA-binding protein; histone family protein DNA-binding protein 2785786 4360125 RPE_2517 Rhodopseudomonas palustris BisA53 histone family protein DNA-binding protein YP_781435.1 2785475 R 316055 CDS YP_781436.1 115524525 4360127 2786374..2788404 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5623 TPR domain protein; hypothetical protein 2788404 4360127 RPE_2518 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781436.1 2786374 D 316055 CDS YP_781437.1 115524526 4360128 2788719..2789084 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 2789084 4360128 RPE_2519 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit A YP_781437.1 2788719 D 316055 CDS YP_781438.1 115524527 4360129 2789075..2789677 1 NC_008435.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2789677 4360129 RPE_2520 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit B YP_781438.1 2789075 D 316055 CDS YP_781439.1 115524528 4360130 2789688..2790293 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 2790293 4360130 RPE_2521 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit C YP_781439.1 2789688 D 316055 CDS YP_781440.1 115524529 4360131 2790395..2790730 1 NC_008435.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein 2790730 4360131 RPE_2522 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781440.1 2790395 D 316055 CDS YP_781441.1 115524530 4360132 2790780..2791970 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 2791970 4360132 RPE_2523 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit D YP_781441.1 2790780 D 316055 CDS YP_781442.1 115524531 4360133 2791967..2792932 1 NC_008435.1 TIGRFAM: methyltransferase FkbM family; KEGG: rpc:RPC_2405 methyltransferase FkbM; FkbM family methyltransferase 2792932 4360133 RPE_2524 Rhodopseudomonas palustris BisA53 FkbM family methyltransferase YP_781442.1 2791967 D 316055 CDS YP_781443.1 115524532 4360134 2792947..2793696 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 2793696 4360134 RPE_2525 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit E YP_781443.1 2792947 D 316055 CDS YP_781444.1 115524533 4360135 2793693..2793911 1 NC_008435.1 KEGG: rpc:RPC_2407 hypothetical protein; hypothetical protein 2793911 4360135 RPE_2526 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781444.1 2793693 D 316055 CDS YP_781445.1 115524534 4360136 2793930..2795255 1 NC_008435.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 2795255 4360136 RPE_2527 Rhodopseudomonas palustris BisA53 NADH dehydrogenase I subunit F YP_781445.1 2793930 D 316055 CDS YP_781446.1 115524535 4360137 2795260..2795469 1 NC_008435.1 KEGG: rpc:RPC_2409 hypothetical protein; hypothetical protein 2795469 4360137 RPE_2528 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781446.1 2795260 D 316055 CDS YP_781447.1 115524536 4360138 2795506..2797581 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 2797581 4360138 RPE_2529 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit G YP_781447.1 2795506 D 316055 CDS YP_781448.1 115524537 4360139 2797592..2798617 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 2798617 4360139 RPE_2530 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit H YP_781448.1 2797592 D 316055 CDS YP_781449.1 115524538 4360140 2798625..2799113 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 2799113 4360140 RPE_2531 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit I YP_781449.1 2798625 D 316055 CDS YP_781450.1 115524539 4360141 2799123..2799761 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 2799761 4360141 RPE_2532 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit J YP_781450.1 2799123 D 316055 CDS YP_781451.1 115524540 4360142 2799758..2800066 1 NC_008435.1 PFAM: NADH-ubiquinone oxidoreductase, chain 4L; KEGG: rpc:RPC_2414 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase subunit 4L 2800066 4360142 RPE_2533 Rhodopseudomonas palustris BisA53 NADH-ubiquinone oxidoreductase subunit 4L YP_781451.1 2799758 D 316055 CDS YP_781452.1 115524541 4360143 2800074..2802176 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 2802176 4360143 RPE_2534 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit L YP_781452.1 2800074 D 316055 CDS YP_781453.1 115524542 4360144 2802176..2803693 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 2803693 4360144 RPE_2535 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit M YP_781453.1 2802176 D 316055 CDS YP_781454.1 115524543 4360145 2803719..2805155 1 NC_008435.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 2805155 4360145 RPE_2536 Rhodopseudomonas palustris BisA53 NADH dehydrogenase subunit N YP_781454.1 2803719 D 316055 CDS YP_781455.1 115524544 4360146 2805157..2805969 1 NC_008435.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: rpc:RPC_2418 biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase 2805969 4360146 RPE_2537 Rhodopseudomonas palustris BisA53 biotin--acetyl-CoA-carboxylase ligase YP_781455.1 2805157 D 316055 CDS YP_781456.1 115524545 4360147 2805969..2807639 1 NC_008435.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rpc:RPC_2419 beta-lactamase-like; beta-lactamase domain-containing protein 2807639 4360147 RPE_2538 Rhodopseudomonas palustris BisA53 beta-lactamase domain-containing protein YP_781456.1 2805969 D 316055 CDS YP_781457.1 115524546 4360148 2807663..2808067 1 NC_008435.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpa:RPA2934 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2808067 4360148 RPE_2539 Rhodopseudomonas palustris BisA53 glyoxalase/bleomycin resistance protein/dioxygenase YP_781457.1 2807663 D 316055 CDS YP_781458.1 115524547 4357998 2808071..2808361 1 NC_008435.1 PFAM: protein of unknown function DUF1467; KEGG: rpc:RPC_2421 protein of unknown function DUF1467; hypothetical protein 2808361 4357998 RPE_2540 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781458.1 2808071 D 316055 CDS YP_781459.1 115524548 4357999 complement(2808313..2808654) 1 NC_008435.1 hypothetical protein 2808654 4357999 RPE_2541 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781459.1 2808313 R 316055 CDS YP_781460.1 115524549 4358000 2808777..2809148 1 NC_008435.1 KEGG: rpc:RPC_2422 hypothetical protein; hypothetical protein 2809148 4358000 RPE_2542 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781460.1 2808777 D 316055 CDS YP_781461.1 115524550 4358001 2809319..2809846 1 NC_008435.1 PFAM: protein of unknown function DUF461; KEGG: rpb:RPB_2594 protein of unknown function DUF461; hypothetical protein 2809846 4358001 RPE_2543 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781461.1 2809319 D 316055 CDS YP_781462.1 115524551 4358002 2810007..2811326 1 NC_008435.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 2811326 4358002 RPE_2544 Rhodopseudomonas palustris BisA53 prolyl-tRNA synthetase YP_781462.1 2810007 D 316055 CDS YP_781463.1 115524552 4358003 2811403..2812683 1 NC_008435.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_2428 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 2812683 4358003 RPE_2545 Rhodopseudomonas palustris BisA53 LolC/E family lipoprotein releasing system, transmembrane protein YP_781463.1 2811403 D 316055 CDS YP_781464.1 115524553 4358004 2812680..2813390 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_2429 ABC transporter related; ABC transporter-like protein 2813390 4358004 RPE_2546 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_781464.1 2812680 D 316055 CDS YP_781465.1 115524554 4358005 complement(2813395..2813646) 1 NC_008435.1 KEGG: rpd:RPD_2862 hypothetical protein; hypothetical protein 2813646 4358005 RPE_2547 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781465.1 2813395 R 316055 CDS YP_781466.1 115524555 4358006 complement(2813676..2813915) 1 NC_008435.1 KEGG: rpd:RPD_2861 hypothetical protein; hypothetical protein 2813915 4358006 RPE_2548 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781466.1 2813676 R 316055 CDS YP_781467.1 115524556 4358007 complement(2814005..2814274) 1 NC_008435.1 KEGG: rpc:RPC_2431 hypothetical protein; hypothetical protein 2814274 4358007 RPE_2549 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781467.1 2814005 R 316055 CDS YP_781468.1 115524557 4358008 2814806..2818303 1 NC_008435.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 2818303 dnaE 4358008 dnaE Rhodopseudomonas palustris BisA53 DNA polymerase III subunit alpha YP_781468.1 2814806 D 316055 CDS YP_781469.1 115524558 4358009 2818368..2818571 1 NC_008435.1 KEGG: rpc:RPC_2434 hypothetical protein; hypothetical protein 2818571 4358009 RPE_2551 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781469.1 2818368 D 316055 CDS YP_781470.1 115524559 4358010 2818571..2818969 1 NC_008435.1 PFAM: PilT protein domain protein; KEGG: rpc:RPC_2435 PilT protein-like; PilT domain-containing protein 2818969 4358010 RPE_2552 Rhodopseudomonas palustris BisA53 PilT domain-containing protein YP_781470.1 2818571 D 316055 CDS YP_781471.1 115524560 4358011 2819332..2820324 1 NC_008435.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2820324 rpsB 4358011 rpsB Rhodopseudomonas palustris BisA53 30S ribosomal protein S2 YP_781471.1 2819332 D 316055 CDS YP_781472.1 115524561 4358012 2820457..2821380 1 NC_008435.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2821380 tsf 4358012 tsf Rhodopseudomonas palustris BisA53 elongation factor Ts YP_781472.1 2820457 D 316055 CDS YP_781473.1 115524562 4358013 2821447..2822163 1 NC_008435.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 2822163 pyrH 4358013 pyrH Rhodopseudomonas palustris BisA53 uridylate kinase YP_781473.1 2821447 D 316055 CDS YP_781474.1 115524563 4358014 2822231..2822794 1 NC_008435.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2822794 frr 4358014 frr Rhodopseudomonas palustris BisA53 ribosome recycling factor YP_781474.1 2822231 D 316055 CDS YP_781475.1 115524564 4358015 2822930..2823688 1 NC_008435.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 2823688 4358015 RPE_2557 Rhodopseudomonas palustris BisA53 undecaprenyl pyrophosphate synthase YP_781475.1 2822930 D 316055 CDS YP_781476.1 115524565 4358016 2823694..2824536 1 NC_008435.1 PFAM: phosphatidate cytidylyltransferase; KEGG: rpc:RPC_2441 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 2824536 4358016 RPE_2558 Rhodopseudomonas palustris BisA53 phosphatidate cytidylyltransferase YP_781476.1 2823694 D 316055 CDS YP_781477.1 115524566 4358017 2824541..2825764 1 NC_008435.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2825764 4358017 RPE_2559 Rhodopseudomonas palustris BisA53 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_781477.1 2824541 D 316055 CDS YP_781478.1 115524567 4358018 2825806..2826957 1 NC_008435.1 TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: rpc:RPC_2443 peptidase M50, putative membrane-associated zinc metallopeptidase; peptidase M50 membrane-associated zinc metallopeptidase 2826957 4358018 RPE_2560 Rhodopseudomonas palustris BisA53 peptidase M50 membrane-associated zinc metallopeptidase YP_781478.1 2825806 D 316055 CDS YP_781479.1 115524568 4358019 2827131..2829674 1 NC_008435.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: rpc:RPC_2444 surface antigen (D15); surface antigen (D15) 2829674 4358019 RPE_2561 Rhodopseudomonas palustris BisA53 surface antigen (D15) YP_781479.1 2827131 D 316055 CDS YP_781480.1 115524569 4358020 2829707..2830789 1 NC_008435.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2830789 lpxD 4358020 lpxD Rhodopseudomonas palustris BisA53 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_781480.1 2829707 D 316055 CDS YP_781481.1 115524570 4358021 2830789..2831244 1 NC_008435.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 2831244 fabZ 4358021 fabZ Rhodopseudomonas palustris BisA53 (3R)-hydroxymyristoyl-ACP dehydratase YP_781481.1 2830789 D 316055 CDS YP_781482.1 115524571 4358022 2831255..2832088 1 NC_008435.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 2832088 4358022 RPE_2564 Rhodopseudomonas palustris BisA53 UDP-N-acetylglucosamine acyltransferase YP_781482.1 2831255 D 316055 CDS YP_781483.1 115524572 4358023 2832111..2832965 1 NC_008435.1 PFAM: protein of unknown function DUF1009; KEGG: rpa:RPA2910 hypothetical protein; hypothetical protein 2832965 4358023 RPE_2565 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781483.1 2832111 D 316055 CDS YP_781484.1 115524573 4358024 2832962..2834137 1 NC_008435.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 2834137 lpxB 4358024 lpxB Rhodopseudomonas palustris BisA53 lipid-A-disaccharide synthase YP_781484.1 2832962 D 316055 CDS YP_781485.1 115524574 4358025 complement(2834190..2835494) 1 NC_008435.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 2835494 gltA 4358025 gltA Rhodopseudomonas palustris BisA53 type II citrate synthase YP_781485.1 2834190 R 316055 CDS YP_781486.1 115524575 4358026 complement(2835652..2837076) 1 NC_008435.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2837076 gltX 4358026 gltX Rhodopseudomonas palustris BisA53 glutamyl-tRNA synthetase YP_781486.1 2835652 R 316055 CDS YP_781487.1 115524576 4358027 2837229..2838911 1 NC_008435.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2838911 4358027 RPE_2569 Rhodopseudomonas palustris BisA53 glutaminyl-tRNA synthetase YP_781487.1 2837229 D 316055 CDS YP_781488.1 115524577 4358028 2838987..2841284 1 NC_008435.1 PFAM: ComEC/Rec2-related protein; KEGG: rpc:RPC_2453 ComEC/Rec2-related protein; ComEC/Rec2-like protein 2841284 4358028 RPE_2570 Rhodopseudomonas palustris BisA53 ComEC/Rec2-like protein YP_781488.1 2838987 D 316055 CDS YP_781489.1 115524578 4358029 complement(2841342..2842055) 1 NC_008435.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 2842055 4358029 RPE_2571 Rhodopseudomonas palustris BisA53 LexA repressor YP_781489.1 2841342 R 316055 CDS YP_781490.1 115524579 4358030 complement(2842236..2843447) 1 NC_008435.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: rpc:RPC_2455 MoeA-like, domain I and II; molybdenum cofactor synthesis domain-containing protein 2843447 4358030 RPE_2572 Rhodopseudomonas palustris BisA53 molybdenum cofactor synthesis domain-containing protein YP_781490.1 2842236 R 316055 CDS YP_781491.1 115524580 4358031 2843669..2843929 1 NC_008435.1 KEGG: rpa:RPA2901 hypothetical protein; hypothetical protein 2843929 4358031 RPE_2573 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781491.1 2843669 D 316055 CDS YP_781492.1 115524581 4358032 2844042..2844347 1 NC_008435.1 KEGG: rpc:RPC_1306 hypothetical protein; hypothetical protein 2844347 4358032 RPE_2574 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781492.1 2844042 D 316055 CDS YP_781493.1 115524582 4358033 2844510..2845436 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: bja:blr1253 dehydrogenase; short-chain dehydrogenase/reductase SDR 2845436 4358033 RPE_2575 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_781493.1 2844510 D 316055 CDS YP_781494.1 115524583 4358034 2845936..2847210 1 NC_008435.1 hypothetical protein 2847210 4358034 RPE_2576 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781494.1 2845936 D 316055 CDS YP_781495.1 115524584 4358035 2847808..2848188 1 NC_008435.1 KEGG: rpa:RPA1717 hypothetical protein; hypothetical protein 2848188 4358035 RPE_2577 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781495.1 2847808 D 316055 CDS YP_781496.1 115524585 4358036 complement(2848483..2848764) 1 NC_008435.1 hypothetical protein 2848764 4358036 RPE_2578 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781496.1 2848483 R 316055 CDS YP_781497.1 115524586 4358037 complement(2849360..2849686) 1 NC_008435.1 hypothetical protein 2849686 4358037 RPE_2579 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781497.1 2849360 R 316055 CDS YP_781498.1 115524587 4358038 2850074..2850592 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_1951 hypothetical protein; hypothetical protein 2850592 4358038 RPE_2580 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781498.1 2850074 D 316055 CDS YP_781499.1 115524588 4358039 2850817..2851224 1 NC_008435.1 KEGG: rpb:RPB_3014 hypothetical protein; hypothetical protein 2851224 4358039 RPE_2581 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781499.1 2850817 D 316055 CDS YP_781500.1 115524589 4358040 complement(2851247..2852014) 1 NC_008435.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_2458 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase 2852014 4358040 RPE_2582 Rhodopseudomonas palustris BisA53 HAD family hydrolase YP_781500.1 2851247 R 316055 CDS YP_781501.1 115524590 4358041 2852214..2853056 1 NC_008435.1 KEGG: rpc:RPC_2459 OmpA/MotB; OmpA/MotB protein 2853056 4358041 RPE_2583 Rhodopseudomonas palustris BisA53 OmpA/MotB protein YP_781501.1 2852214 D 316055 CDS YP_781502.1 115524591 4358042 2853240..2853518 1 NC_008435.1 PFAM: type IV pilus assembly PilZ; KEGG: rpa:RPA4296 hypothetical protein; type IV pilus assembly PilZ 2853518 4358042 RPE_2584 Rhodopseudomonas palustris BisA53 type IV pilus assembly PilZ YP_781502.1 2853240 D 316055 CDS YP_781503.1 115524592 4358043 complement(2853543..2856194) 1 NC_008435.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein domain protein; Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein; KEGG: rpc:RPC_2461 ATPase, E1-E2 type; P-type HAD superfamily ATPase 2856194 4358043 RPE_2585 Rhodopseudomonas palustris BisA53 P-type HAD superfamily ATPase YP_781503.1 2853543 R 316055 CDS YP_781504.1 115524593 4358044 complement(2857356..2857859) 1 NC_008435.1 PFAM: heat shock protein Hsp20; KEGG: rpc:RPC_2462 heat shock protein HSP20; heat shock protein Hsp20 2857859 4358044 RPE_2586 Rhodopseudomonas palustris BisA53 heat shock protein Hsp20 YP_781504.1 2857356 R 316055 CDS YP_781505.1 115524594 4358045 2858082..2858486 1 NC_008435.1 KEGG: rpc:RPC_2463 hypothetical protein; hypothetical protein 2858486 4358045 RPE_2587 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781505.1 2858082 D 316055 CDS YP_781506.1 115524595 4358046 complement(2858686..2859756) 1 NC_008435.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2859756 lpxD 4358046 lpxD Rhodopseudomonas palustris BisA53 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_781506.1 2858686 R 316055 CDS YP_781507.1 115524596 4358047 complement(2859798..2860355) 1 NC_008435.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 2860355 moaC 4358047 moaC Rhodopseudomonas palustris BisA53 molybdenum cofactor biosynthesis protein MoaC YP_781507.1 2859798 R 316055 CDS YP_781508.1 115524597 4358048 complement(2860358..2861179) 1 NC_008435.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 2861179 trpC 4358048 trpC Rhodopseudomonas palustris BisA53 indole-3-glycerol-phosphate synthase YP_781508.1 2860358 R 316055 CDS YP_781509.1 115524598 4358049 complement(2861187..2862206) 1 NC_008435.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2862206 trpD 4358049 trpD Rhodopseudomonas palustris BisA53 anthranilate phosphoribosyltransferase YP_781509.1 2861187 R 316055 CDS YP_781510.1 115524599 4360269 complement(2862247..2864148) 1 NC_008435.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpc:RPC_2468 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2864148 4360269 RPE_2592 Rhodopseudomonas palustris BisA53 PpiC-type peptidyl-prolyl cis-trans isomerase YP_781510.1 2862247 R 316055 CDS YP_781511.1 115524600 4360270 2864436..2865197 1 NC_008435.1 PFAM: triosephosphate isomerase; KEGG: rpc:RPC_2471 triosephosphate isomerase; Triose-phosphate isomerase 2865197 4360270 RPE_2593 Rhodopseudomonas palustris BisA53 Triose-phosphate isomerase YP_781511.1 2864436 D 316055 CDS YP_781512.1 115524601 4360271 2865354..2865746 1 NC_008435.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: rpc:RPC_2472 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 2865746 secG 4360271 secG Rhodopseudomonas palustris BisA53 preprotein translocase subunit SecG YP_781512.1 2865354 D 316055 CDS YP_781513.1 115524602 4360272 2865913..2867544 1 NC_008435.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2867544 pyrG 4360272 pyrG Rhodopseudomonas palustris BisA53 CTP synthetase YP_781513.1 2865913 D 316055 CDS YP_781514.1 115524603 4360273 2867697..2870096 1 NC_008435.1 PFAM: protein of unknown function DUF1217; KEGG: rpc:RPC_2474 protein of unknown function DUF1217; hypothetical protein 2870096 4360273 RPE_2596 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781514.1 2867697 D 316055 CDS YP_781515.1 115524604 4360274 complement(2870144..2870461) 1 NC_008435.1 PFAM: PAAR repeat-containing protein; KEGG: rpb:RPB_2789 PaaR; PAAR repeat-containing protein 2870461 4360274 RPE_2597 Rhodopseudomonas palustris BisA53 PAAR repeat-containing protein YP_781515.1 2870144 R 316055 CDS YP_781516.1 115524605 4360275 complement(2870491..2870766) 1 NC_008435.1 KEGG: rpa:RPA2882 hypothetical protein; hypothetical protein 2870766 4360275 RPE_2598 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781516.1 2870491 R 316055 CDS YP_781517.1 115524606 4360276 complement(2870756..2870929) 1 NC_008435.1 KEGG: bbr:BB1689 hypothetical protein; hypothetical protein 2870929 4360276 RPE_2599 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781517.1 2870756 R 316055 CDS YP_781518.1 115524607 4360277 2871181..2872056 1 NC_008435.1 KEGG: rpc:RPC_2476 hypothetical protein; hypothetical protein 2872056 4360277 RPE_2600 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781518.1 2871181 D 316055 CDS YP_781519.1 115524608 4360278 2872057..2872974 1 NC_008435.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2872974 4360278 RPE_2601 Rhodopseudomonas palustris BisA53 2-dehydro-3-deoxyphosphooctonate aldolase YP_781519.1 2872057 D 316055 CDS YP_781520.1 115524609 4360279 2873255..2876239 1 NC_008435.1 TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: rpc:RPC_1006 glutamate synthase (NADPH), homotetrameric; putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein 2876239 4360279 RPE_2602 Rhodopseudomonas palustris BisA53 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein YP_781520.1 2873255 D 316055 CDS YP_781521.1 115524610 4360280 complement(2876424..2877506) 1 NC_008435.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein, MerR; GAF domain protein; KEGG: rpc:RPC_2479 putative GAF sensor protein; putative GAF sensor protein 2877506 4360280 RPE_2603 Rhodopseudomonas palustris BisA53 putative GAF sensor protein YP_781521.1 2876424 R 316055 CDS YP_781522.1 115524611 4360281 2877680..2877964 1 NC_008435.1 KEGG: bja:bll4799 hypothetical protein; hypothetical protein 2877964 4360281 RPE_2604 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781522.1 2877680 D 316055 CDS YP_781523.1 115524612 4360282 2877989..2879587 1 NC_008435.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rpc:RPC_2481 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 2879587 4360282 RPE_2605 Rhodopseudomonas palustris BisA53 glucose-methanol-choline oxidoreductase YP_781523.1 2877989 D 316055 CDS YP_781524.1 115524613 4360283 complement(2879626..2880117) 1 NC_008435.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2880117 4360283 RPE_2606 Rhodopseudomonas palustris BisA53 7-cyano-7-deazaguanine reductase YP_781524.1 2879626 R 316055 CDS YP_781525.1 115524614 4360284 2880307..2881590 1 NC_008435.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2881590 eno 4360284 eno Rhodopseudomonas palustris BisA53 phosphopyruvate hydratase YP_781525.1 2880307 D 316055 CDS YP_781526.1 115524615 4360285 2881683..2882819 1 NC_008435.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_2484 putative NADH oxidoreductase; alcohol dehydrogenase 2882819 4360285 RPE_2608 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_781526.1 2881683 D 316055 CDS YP_781527.1 115524616 4360286 complement(2883016..2883627) 1 NC_008435.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rpc:RPC_2485 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 2883627 4360286 RPE_2609 Rhodopseudomonas palustris BisA53 lysine exporter protein LysE/YggA YP_781527.1 2883016 R 316055 CDS YP_781528.1 115524617 4360287 2883824..2884381 1 NC_008435.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rpc:RPC_2487 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 2884381 4360287 RPE_2610 Rhodopseudomonas palustris BisA53 NADPH-dependent FMN reductase YP_781528.1 2883824 D 316055 CDS YP_781529.1 115524618 4360288 2884447..2884764 1 NC_008435.1 PFAM: Septum formation initiator; KEGG: rpc:RPC_2488 septum formation initiator; septum formation initiator 2884764 4360288 RPE_2611 Rhodopseudomonas palustris BisA53 septum formation initiator YP_781529.1 2884447 D 316055 CDS YP_781530.1 115524619 4360289 2884929..2885969 1 NC_008435.1 PFAM: dehydrogenase, E1 component; KEGG: rpc:RPC_2489 pyruvate dehydrogenase (lipoamide); pyruvate dehydrogenase 2885969 4360289 RPE_2612 Rhodopseudomonas palustris BisA53 pyruvate dehydrogenase YP_781530.1 2884929 D 316055 CDS YP_781531.1 115524620 4360290 2885979..2886578 1 NC_008435.1 hypothetical protein 2886578 4360290 RPE_2613 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781531.1 2885979 D 316055 CDS YP_781532.1 115524621 4360291 2886599..2887993 1 NC_008435.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 2887993 4360291 RPE_2614 Rhodopseudomonas palustris BisA53 pyruvate dehydrogenase subunit beta YP_781532.1 2886599 D 316055 CDS YP_781533.1 115524622 4360292 2887997..2888293 1 NC_008435.1 KEGG: rpb:RPB_2769 hypothetical protein; hypothetical protein 2888293 4360292 RPE_2615 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781533.1 2887997 D 316055 CDS YP_781534.1 115524623 4360293 2888307..2889662 1 NC_008435.1 KEGG: rpc:RPC_2492 dihydrolipoamide acetyltransferase, long form; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; branched-chain alpha-keto acid dehydrogenase subunit E2 2889662 4360293 RPE_2616 Rhodopseudomonas palustris BisA53 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_781534.1 2888307 D 316055 CDS YP_781535.1 115524624 4360294 2889664..2890005 1 NC_008435.1 KEGG: nwi:Nwi_1815 hypothetical protein; hypothetical protein 2890005 4360294 RPE_2617 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781535.1 2889664 D 316055 CDS YP_781536.1 115524625 4360295 2890025..2891446 1 NC_008435.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 2891446 4360295 RPE_2618 Rhodopseudomonas palustris BisA53 dihydrolipoamide dehydrogenase YP_781536.1 2890025 D 316055 CDS YP_781537.1 115524626 4360296 2891562..2892161 1 NC_008435.1 KEGG: mag:amb4173 hypothetical protein; hypothetical protein 2892161 4360296 RPE_2619 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781537.1 2891562 D 316055 CDS YP_781538.1 115524627 4360297 2892394..2892963 1 NC_008435.1 hypothetical protein 2892963 4360297 RPE_2620 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781538.1 2892394 D 316055 CDS YP_781539.1 115524628 4360298 2893001..2893789 1 NC_008435.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpc:RPC_2495 Sel1-like; Sel1 domain-containing protein 2893789 4360298 RPE_2621 Rhodopseudomonas palustris BisA53 Sel1 domain-containing protein YP_781539.1 2893001 D 316055 CDS YP_781540.1 115524629 4360299 complement(2893819..2894610) 1 NC_008435.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpd:RPD_2804 exodeoxyribonuclease III; exodeoxyribonuclease III 2894610 4360299 RPE_2622 Rhodopseudomonas palustris BisA53 exodeoxyribonuclease III YP_781540.1 2893819 R 316055 CDS YP_781541.1 115524630 4360300 2894761..2895891 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_2497 secretion protein HlyD; RND family efflux transporter MFP subunit 2895891 4360300 RPE_2623 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_781541.1 2894761 D 316055 CDS YP_781542.1 115524631 4360301 2895894..2899022 1 NC_008435.1 PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2498 acriflavin resistance protein; acriflavin resistance protein 2899022 4360301 RPE_2624 Rhodopseudomonas palustris BisA53 acriflavin resistance protein YP_781542.1 2895894 D 316055 CDS YP_781543.1 115524632 4360302 complement(2899030..2900085) 1 NC_008435.1 KEGG: rpb:RPB_2754 neurotransmitter-gated ion-channel ligand-binding; hypothetical protein 2900085 4360302 RPE_2625 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781543.1 2899030 R 316055 CDS YP_781544.1 115524633 4360303 complement(2900082..2901122) 1 NC_008435.1 KEGG: rpd:RPD_2798 hypothetical protein; hypothetical protein 2901122 4360303 RPE_2626 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781544.1 2900082 R 316055 CDS YP_781545.1 115524634 4360304 2901366..2901590 1 NC_008435.1 PFAM: protein of unknown function DUF433; KEGG: rpc:RPC_2499 protein of unknown function DUF433; hypothetical protein 2901590 4360304 RPE_2627 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781545.1 2901366 D 316055 CDS YP_781546.1 115524635 4360306 complement(2901952..2902281) 1 NC_008435.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpd:RPD_2797 HesB/YadR/YfhF; hypothetical protein 2902281 4360306 RPE_2629 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781546.1 2901952 R 316055 CDS YP_781547.1 115524636 4360307 2902399..2903601 1 NC_008435.1 KEGG: rpc:RPC_2507 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: putative deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; deoxyguanosinetriphosphate triphosphohydrolase 2903601 4360307 RPE_2630 Rhodopseudomonas palustris BisA53 deoxyguanosinetriphosphate triphosphohydrolase YP_781547.1 2902399 D 316055 CDS YP_781548.1 115524637 4360308 2903732..2904127 1 NC_008435.1 KEGG: rpa:RPA2550 hypothetical protein; hypothetical protein 2904127 4360308 RPE_2631 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781548.1 2903732 D 316055 CDS YP_781549.1 115524638 4360309 2904706..2906199 1 NC_008435.1 PFAM: porin; KEGG: rpb:RPB_3036 putative Omp2b porin; porin 2906199 4360309 RPE_2632 Rhodopseudomonas palustris BisA53 porin YP_781549.1 2904706 D 316055 CDS YP_781550.1 115524639 4360310 complement(2906482..2908800) 1 NC_008435.1 PFAM: Lytic transglycosylase, catalytic; KEGG: rpc:RPC_2890 lytic transglycosylase, catalytic; lytic transglycosylase 2908800 4360310 RPE_2633 Rhodopseudomonas palustris BisA53 lytic transglycosylase YP_781550.1 2906482 R 316055 CDS YP_781551.1 115524640 4360311 complement(2908928..2909602) 1 NC_008435.1 KEGG: rpc:RPC_2889 hypothetical protein; hypothetical protein 2909602 4360311 RPE_2634 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781551.1 2908928 R 316055 CDS YP_781552.1 115524641 4360312 2909820..2910230 1 NC_008435.1 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 2910230 4360312 RPE_2635 Rhodopseudomonas palustris BisA53 NADH dehydrogenase YP_781552.1 2909820 D 316055 CDS YP_781553.1 115524642 4360313 2910675..2911430 1 NC_008435.1 KEGG: rpb:RPB_3129 secretin/TonB, short-like protein; secretin/TonB, short-like protein 2911430 4360313 RPE_2636 Rhodopseudomonas palustris BisA53 secretin/TonB, short-like protein YP_781553.1 2910675 D 316055 CDS YP_781554.1 115524643 4360314 2911472..2911981 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_3128 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 2911981 4360314 RPE_2637 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_781554.1 2911472 D 316055 CDS YP_781555.1 115524644 4360315 2912084..2913058 1 NC_008435.1 PFAM: FecR protein; KEGG: rpb:RPB_3127 putative FecR; putative FecR protein 2913058 4360315 RPE_2638 Rhodopseudomonas palustris BisA53 putative FecR protein YP_781555.1 2912084 D 316055 CDS YP_781556.1 115524645 4360316 2913172..2926188 1 NC_008435.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: rpb:RPB_3126 filamentous haemagglutinin-like protein; filamentous hemagglutinin outer membrane protein 2926188 4360316 RPE_2639 Rhodopseudomonas palustris BisA53 filamentous hemagglutinin outer membrane protein YP_781556.1 2913172 D 316055 CDS YP_781557.1 115524646 4360317 2926635..2927276 1 NC_008435.1 KEGG: gox:GOX1578 hypothetical protein; hypothetical protein 2927276 4360317 RPE_2640 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781557.1 2926635 D 316055 CDS YP_781558.1 115524647 4360318 2927279..2928499 1 NC_008435.1 PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: gox:GOX1577 ATP-dependent Clp protease ATP-binding subunit ClpA; ATPase 2928499 4360318 RPE_2641 Rhodopseudomonas palustris BisA53 ATPase YP_781558.1 2927279 D 316055 CDS YP_781559.1 115524648 4360319 2928496..2930754 1 NC_008435.1 hypothetical protein 2930754 4360319 RPE_2642 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781559.1 2928496 D 316055 CDS YP_781560.1 115524649 4360320 2930811..2931758 1 NC_008435.1 KEGG: gox:GOX1574 hypothetical protein; hypothetical protein 2931758 4360320 RPE_2643 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781560.1 2930811 D 316055 CDS YP_781561.1 115524650 4360321 2931793..2931993 1 NC_008435.1 KEGG: ccr:CC0185 TonB-dependent receptor; hypothetical protein 2931993 4360321 RPE_2644 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781561.1 2931793 D 316055 CDS YP_781562.1 115524651 4360322 2932150..2932788 1 NC_008435.1 PFAM: Secretin/TonB, short N-terminal domain; KEGG: rpb:RPB_2211 hypothetical protein; secretin/TonB short N-terminal domain-containing protein 2932788 4360322 RPE_2645 Rhodopseudomonas palustris BisA53 secretin/TonB short N-terminal domain-containing protein YP_781562.1 2932150 D 316055 CDS YP_781563.1 115524652 4360323 2932785..2933393 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_2212 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 2933393 4360323 RPE_2646 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_781563.1 2932785 D 316055 CDS YP_781564.1 115524653 4360324 2933390..2934367 1 NC_008435.1 PFAM: FecR protein; KEGG: rpb:RPB_2213 putative FecR; putative FecR protein 2934367 4360324 RPE_2647 Rhodopseudomonas palustris BisA53 putative FecR protein YP_781564.1 2933390 D 316055 CDS YP_781565.1 115524654 4360325 2934536..2947021 1 NC_008435.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: rpc:RPC_2911 filamentous haemagglutinin-like; filamentous hemagglutinin outer membrane protein 2947021 4360325 RPE_2648 Rhodopseudomonas palustris BisA53 filamentous hemagglutinin outer membrane protein YP_781565.1 2934536 D 316055 CDS YP_781566.1 115524655 4360326 2947611..2948324 1 NC_008435.1 TIGRFAM: TonB family protein; KEGG: rpb:RPB_2211 hypothetical protein; TonB family protein 2948324 4360326 RPE_2649 Rhodopseudomonas palustris BisA53 TonB family protein YP_781566.1 2947611 D 316055 CDS YP_781567.1 115524656 4360327 2948321..2948926 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_2212 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 2948926 4360327 RPE_2650 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_781567.1 2948321 D 316055 CDS YP_781568.1 115524657 4360328 2948923..2949897 1 NC_008435.1 PFAM: FecR protein; KEGG: rpb:RPB_2213 putative FecR; putative FecR protein 2949897 4360328 RPE_2651 Rhodopseudomonas palustris BisA53 putative FecR protein YP_781568.1 2948923 D 316055 CDS YP_781569.1 115524658 4360329 2949934..2962935 1 NC_008435.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: bur:Bcep18194_B1068 haemagglutinin-like; filamentous hemagglutinin outer membrane protein 2962935 4360329 RPE_2652 Rhodopseudomonas palustris BisA53 filamentous hemagglutinin outer membrane protein YP_781569.1 2949934 D 316055 CDS YP_781570.1 115524659 4360330 complement(2963192..2963467) 1 NC_008435.1 KEGG: mag:amb3151 transposase and inactivated derivative; hypothetical protein 2963467 4360330 RPE_2653 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781570.1 2963192 R 316055 CDS YP_781571.1 115524660 4360331 2963672..2964472 1 NC_008435.1 PFAM: Secretin/TonB, short N-terminal domain; KEGG: rpb:RPB_3129 secretin/TonB, short-like protein; secretin/TonB short N-terminal domain-containing protein 2964472 4360331 RPE_2654 Rhodopseudomonas palustris BisA53 secretin/TonB short N-terminal domain-containing protein YP_781571.1 2963672 D 316055 CDS YP_781572.1 115524661 4360332 2964475..2964999 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_3128 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 2964999 4360332 RPE_2655 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_781572.1 2964475 D 316055 CDS YP_781573.1 115524662 4360333 2965035..2966075 1 NC_008435.1 PFAM: FecR protein; KEGG: rpc:RPC_2904 putative FecR; putative FecR protein 2966075 4360333 RPE_2656 Rhodopseudomonas palustris BisA53 putative FecR protein YP_781573.1 2965035 D 316055 CDS YP_781574.1 115524663 4360334 2966258..2979880 1 NC_008435.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: rpc:RPC_2997 filamentous haemagglutinin-like; filamentous hemagglutinin outer membrane protein 2979880 4360334 RPE_2657 Rhodopseudomonas palustris BisA53 filamentous hemagglutinin outer membrane protein YP_781574.1 2966258 D 316055 CDS YP_781575.1 115524664 4360335 complement(2979900..2980487) 1 NC_008435.1 TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: rpc:RPC_3004 putative general secretion pathway protein J; prepilin-type cleavage/methylation-like protein 2980487 4360335 RPE_2658 Rhodopseudomonas palustris BisA53 prepilin-type cleavage/methylation-like protein YP_781575.1 2979900 R 316055 CDS YP_781576.1 115524665 4360336 complement(2980519..2980965) 1 NC_008435.1 TIGRFAM: Prepilin-type cleavage/methylation-like; prepilin-type cleavage/methylation-like protein 2980965 4360336 RPE_2659 Rhodopseudomonas palustris BisA53 prepilin-type cleavage/methylation-like protein YP_781576.1 2980519 R 316055 CDS YP_781577.1 115524666 4360337 complement(2980937..2981419) 1 NC_008435.1 KEGG: bja:bll6018 probable general secretion pathway protein H precursor; putative general secretion pathway protein H 2981419 4360337 RPE_2660 Rhodopseudomonas palustris BisA53 putative general secretion pathway protein H YP_781577.1 2980937 R 316055 CDS YP_781578.1 115524667 4360338 complement(2981394..2981864) 1 NC_008435.1 TIGRFAM: general secretion pathway protein G; PFAM: secretion system protein G; KEGG: bja:bll6019 probable general secretion pathway protein G precursor; general secretion pathway protein G 2981864 4360338 RPE_2661 Rhodopseudomonas palustris BisA53 general secretion pathway protein G YP_781578.1 2981394 R 316055 CDS YP_781579.1 115524668 4360339 complement(2981881..2983083) 1 NC_008435.1 PFAM: type II secretion system protein; KEGG: bja:bll6020 probable general secretion pathway protein F; type II secretion system protein 2983083 4360339 RPE_2662 Rhodopseudomonas palustris BisA53 type II secretion system protein YP_781579.1 2981881 R 316055 CDS YP_781580.1 115524669 4360340 complement(2983274..2984956) 1 NC_008435.1 PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: bja:bll6021 general secretion pathway protein E; type II secretion system protein E 2984956 4360340 RPE_2663 Rhodopseudomonas palustris BisA53 type II secretion system protein E YP_781580.1 2983274 R 316055 CDS YP_781581.1 115524670 4360341 complement(2984968..2985411) 1 NC_008435.1 KEGG: rpc:RPC_2998 hypothetical protein; hypothetical protein 2985411 4360341 RPE_2664 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781581.1 2984968 R 316055 CDS YP_781582.1 115524671 4360342 complement(2985408..2985965) 1 NC_008435.1 hypothetical protein 2985965 4360342 RPE_2665 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781582.1 2985408 R 316055 CDS YP_781583.1 115524672 4360343 complement(2985962..2986996) 1 NC_008435.1 PFAM: Fimbrial assembly family protein; KEGG: bja:bll6015 putative general secretory pathway protein L; fimbrial assembly family protein 2986996 4360343 RPE_2666 Rhodopseudomonas palustris BisA53 fimbrial assembly family protein YP_781583.1 2985962 R 316055 CDS YP_781584.1 115524673 4360344 complement(2987016..2987891) 1 NC_008435.1 KEGG: bja:bll6016 putative general secretory pathway protein K; hypothetical protein 2987891 4360344 RPE_2667 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781584.1 2987016 R 316055 CDS YP_781585.1 115524674 4360345 complement(2987888..2988568) 1 NC_008435.1 KEGG: bja:blr6023 general secretion pathway protein O; general secretion pathway protein O 2988568 4360345 RPE_2668 Rhodopseudomonas palustris BisA53 general secretion pathway protein O YP_781585.1 2987888 R 316055 CDS YP_781586.1 115524675 4360346 complement(2988588..2990957) 1 NC_008435.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rpc:RPC_3010 type II and III secretion system protein; general secretion pathway protein D 2990957 4360346 RPE_2669 Rhodopseudomonas palustris BisA53 general secretion pathway protein D YP_781586.1 2988588 R 316055 CDS YP_781587.1 115524676 4360347 complement(2991107..2991751) 1 NC_008435.1 PFAM: Sigma-70, region 4 type 2; KEGG: rpb:RPB_2205 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 2991751 4360347 RPE_2670 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_781587.1 2991107 R 316055 CDS YP_781588.1 115524677 4360348 complement(2991833..2993845) 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bur:Bcep18194_B1067 TPR repeat protein; hypothetical protein 2993845 4360348 RPE_2671 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781588.1 2991833 R 316055 CDS YP_781589.1 115524678 4360349 complement(2993847..2996126) 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5623 TPR domain protein; hypothetical protein 2996126 4360349 RPE_2672 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781589.1 2993847 R 316055 CDS YP_781590.1 115524679 4360350 2996468..2998378 1 NC_008435.1 KEGG: rpc:RPC_2999 hypothetical protein; hypothetical protein 2998378 4360350 RPE_2673 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781590.1 2996468 D 316055 CDS YP_781591.1 115524680 4360351 2998465..2999460 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: rpa:RPA0173 putative sugar nucleotide dehydratase; NAD-dependent epimerase/dehydratase 2999460 4360351 RPE_2674 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_781591.1 2998465 D 316055 CDS YP_781592.1 115524681 4360352 2999607..2999921 1 NC_008435.1 KEGG: rpb:RPB_3126 filamentous haemagglutinin-like protein; hypothetical protein 2999921 4360352 RPE_2675 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781592.1 2999607 D 316055 CDS YP_781593.1 115524682 4360354 3000390..3000725 1 NC_008435.1 KEGG: rpc:RPC_2931 hypothetical protein; hypothetical protein 3000725 4360354 RPE_2676 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781593.1 3000390 D 316055 CDS YP_781594.1 115524683 4360355 3000780..3001190 1 NC_008435.1 KEGG: rpc:RPC_2930 hypothetical protein; hypothetical protein 3001190 4360355 RPE_2677 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781594.1 3000780 D 316055 CDS YP_781595.1 115524684 4360356 3001382..3002362 1 NC_008435.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rpc:RPC_2929 arginase; arginase 3002362 4360356 RPE_2678 Rhodopseudomonas palustris BisA53 arginase YP_781595.1 3001382 D 316055 CDS YP_781596.1 115524685 4360357 3002410..3002724 1 NC_008435.1 hypothetical protein 3002724 4360357 RPE_2679 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781596.1 3002410 D 316055 CDS YP_781597.1 115524686 4360358 complement(3002726..3002983) 1 NC_008435.1 hypothetical protein 3002983 4360358 RPE_2680 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781597.1 3002726 R 316055 CDS YP_781598.1 115524687 4360359 3003219..3003419 1 NC_008435.1 KEGG: rpc:RPC_2927 hypothetical protein; hypothetical protein 3003419 4360359 RPE_2681 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781598.1 3003219 D 316055 CDS YP_781599.1 115524688 4360360 3003825..3004859 1 NC_008435.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 3004859 4360360 RPE_2682 Rhodopseudomonas palustris BisA53 fructose-1,6-bisphosphatase YP_781599.1 3003825 D 316055 CDS YP_781600.1 115524689 4360361 3004880..3005755 1 NC_008435.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: rpc:RPC_2898 phosphoribulokinase; phosphoribulokinase 3005755 4360361 RPE_2683 Rhodopseudomonas palustris BisA53 phosphoribulokinase YP_781600.1 3004880 D 316055 CDS YP_781601.1 115524690 4360362 3005868..3007892 1 NC_008435.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 3007892 4360362 RPE_2684 Rhodopseudomonas palustris BisA53 transketolase YP_781601.1 3005868 D 316055 CDS YP_781602.1 115524691 4360363 3007937..3009022 1 NC_008435.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 3009022 4360363 RPE_2685 Rhodopseudomonas palustris BisA53 fructose-1,6-bisphosphate aldolase YP_781602.1 3007937 D 316055 CDS YP_781603.1 115524692 4360364 3009079..3010461 1 NC_008435.1 catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation; ribulose bisphosphate carboxylase 3010461 4360364 RPE_2686 Rhodopseudomonas palustris BisA53 ribulose bisphosphate carboxylase YP_781603.1 3009079 D 316055 CDS YP_781604.1 115524693 4360365 3010632..3011318 1 NC_008435.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_2894 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase 3011318 4360365 RPE_2687 Rhodopseudomonas palustris BisA53 HAD family hydrolase YP_781604.1 3010632 D 316055 CDS YP_781605.1 115524694 4360366 3011583..3011903 1 NC_008435.1 KEGG: rpc:RPC_0662 hypothetical protein; hypothetical protein 3011903 4360366 RPE_2688 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781605.1 3011583 D 316055 CDS YP_781606.1 115524695 4360367 complement(3011943..3012362) 1 NC_008435.1 KEGG: rpa:RPA4550 hypothetical protein; hypothetical protein 3012362 4360367 RPE_2689 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781606.1 3011943 R 316055 CDS YP_781607.1 115524696 4360368 complement(3012463..3012687) 1 NC_008435.1 KEGG: rpd:RPD_1466 hypothetical protein; hypothetical protein 3012687 4360368 RPE_2690 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781607.1 3012463 R 316055 CDS YP_781608.1 115524697 4360370 3013289..3015082 1 NC_008435.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 3015082 argS 4360370 argS Rhodopseudomonas palustris BisA53 arginyl-tRNA synthetase YP_781608.1 3013289 D 316055 CDS YP_781609.1 115524698 4360371 3015189..3016580 1 NC_008435.1 PFAM: Sporulation domain protein; KEGG: rpc:RPC_2509 sporulation related; sporulation domain-containing protein 3016580 4360371 RPE_2692 Rhodopseudomonas palustris BisA53 sporulation domain-containing protein YP_781609.1 3015189 D 316055 CDS YP_781610.1 115524699 4360372 3016626..3017654 1 NC_008435.1 PFAM: glycoside hydrolase, family 3 domain protein; KEGG: rpb:RPB_2748 beta-N-acetylhexosaminidase; Beta-N-acetylhexosaminidase 3017654 4360372 RPE_2693 Rhodopseudomonas palustris BisA53 Beta-N-acetylhexosaminidase YP_781610.1 3016626 D 316055 CDS YP_781611.1 115524700 4360373 3017651..3018490 1 NC_008435.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: rpc:RPC_2511 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 3018490 4360373 RPE_2694 Rhodopseudomonas palustris BisA53 chromosome segregation and condensation protein ScpA YP_781611.1 3017651 D 316055 CDS YP_781612.1 115524701 4360374 3018512..3019240 1 NC_008435.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rpc:RPC_2512 putative transcriptional regulator; putative transcriptional regulator 3019240 4360374 RPE_2695 Rhodopseudomonas palustris BisA53 putative transcriptional regulator YP_781612.1 3018512 D 316055 CDS YP_781613.1 115524702 4360375 3019353..3019589 1 NC_008435.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 3019589 tatA 4360375 tatA Rhodopseudomonas palustris BisA53 twin arginine translocase protein A YP_781613.1 3019353 D 316055 CDS YP_781614.1 115524703 4360376 3019713..3020240 1 NC_008435.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: rpc:RPC_2514 twin-arginine translocation protein TatB; twin-arginine translocation protein TatB 3020240 4360376 RPE_2697 Rhodopseudomonas palustris BisA53 twin-arginine translocation protein TatB YP_781614.1 3019713 D 316055 CDS YP_781615.1 115524704 4360377 3020237..3021061 1 NC_008435.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rpb:RPB_2743 sec-independent protein translocase TatC; Sec-independent protein translocase TatC 3021061 4360377 RPE_2698 Rhodopseudomonas palustris BisA53 Sec-independent protein translocase TatC YP_781615.1 3020237 D 316055 CDS YP_781616.1 115524705 4360378 3021152..3021526 1 NC_008435.1 KEGG: rpc:RPC_2516 hypothetical protein; hypothetical protein 3021526 4360378 RPE_2699 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781616.1 3021152 D 316055 CDS YP_781617.1 115524706 4360379 3021753..3023183 1 NC_008435.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 3023183 4360379 RPE_2700 Rhodopseudomonas palustris BisA53 seryl-tRNA synthetase YP_781617.1 3021753 D 316055 CDS YP_781618.1 115524707 4360380 3023335..3023730 1 NC_008435.1 KEGG: rpc:RPC_1548 hypothetical protein; hypothetical protein 3023730 4360380 RPE_2701 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781618.1 3023335 D 316055 CDS YP_781619.1 115524708 4360381 complement(3023955..3024545) 1 NC_008435.1 KEGG: rpc:RPC_2518 hypothetical protein; hypothetical protein 3024545 4360381 RPE_2702 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781619.1 3023955 R 316055 CDS YP_781620.1 115524709 4360382 3024713..3025480 1 NC_008435.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 3025480 surE 4360382 surE Rhodopseudomonas palustris BisA53 stationary phase survival protein SurE YP_781620.1 3024713 D 316055 CDS YP_781621.1 115524710 4360383 complement(3025655..3026023) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_2520 response regulator receiver domain protein (CheY-like); response regulator receiver protein 3026023 4360383 RPE_2704 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_781621.1 3025655 R 316055 CDS YP_781622.1 115524711 4360384 3026222..3026869 1 NC_008435.1 KEGG: rpc:RPC_2521 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; protein-L-isoaspartate O-methyltransferase 3026869 4360384 RPE_2705 Rhodopseudomonas palustris BisA53 protein-L-isoaspartate O-methyltransferase YP_781622.1 3026222 D 316055 CDS YP_781623.1 115524712 4360385 3027031..3028410 1 NC_008435.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: rpc:RPC_2522 peptidase M23B; peptidase M23B 3028410 4360385 RPE_2706 Rhodopseudomonas palustris BisA53 peptidase M23B YP_781623.1 3027031 D 316055 CDS YP_781624.1 115524713 4360386 complement(3028788..3029177) 1 NC_008435.1 PFAM: protein of unknown function DUF1232; KEGG: rpc:RPC_2523 protein of unknown function DUF1232; hypothetical protein 3029177 4360386 RPE_2707 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781624.1 3028788 R 316055 CDS YP_781625.1 115524714 4360387 complement(3029245..3029550) 1 NC_008435.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 3029550 phhB 4360387 phhB Rhodopseudomonas palustris BisA53 pterin-4-alpha-carbinolamine dehydratase YP_781625.1 3029245 R 316055 CDS YP_781626.1 115524715 4360388 3029719..3031149 1 NC_008435.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rpc:RPC_2525 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 3031149 4360388 RPE_2709 Rhodopseudomonas palustris BisA53 TRAP transporter solute receptor TAXI family protein YP_781626.1 3029719 D 316055 CDS YP_781627.1 115524716 4360389 3031630..3033453 1 NC_008435.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: rpb:RPB_0103 GTPase; GTP-binding protein TypA 3033453 4360389 RPE_2710 Rhodopseudomonas palustris BisA53 GTP-binding protein TypA YP_781627.1 3031630 D 316055 CDS YP_781628.1 115524717 4360390 3033740..3034210 1 NC_008435.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: rpc:RPC_2532 peptidylprolyl isomerase; peptidylprolyl isomerase 3034210 4360390 RPE_2711 Rhodopseudomonas palustris BisA53 peptidylprolyl isomerase YP_781628.1 3033740 D 316055 CDS YP_781629.1 115524718 4360391 complement(3034654..3035217) 1 NC_008435.1 hypothetical protein 3035217 4360391 RPE_2712 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781629.1 3034654 R 316055 CDS YP_781630.1 115524719 4360392 complement(3035267..3035446) 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpa:RPA1492 light harvesting protein B-800-850, alpha chain E (antenna pigment protein, alpha chain E) (LH II-E alpha); antenna complex subunit alpha/beta 3035446 4360392 RPE_2713 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_781630.1 3035267 R 316055 CDS YP_781631.1 115524720 4360393 complement(3035472..3035642) 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpb:RPB_4448 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 3035642 4360393 RPE_2714 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_781631.1 3035472 R 316055 CDS YP_781632.1 115524721 4360394 complement(3036064..3036246) 1 NC_008435.1 KEGG: rpb:RPB_2190 hypothetical protein; hypothetical protein 3036246 4360394 RPE_2715 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781632.1 3036064 R 316055 CDS YP_781633.1 115524722 4360395 complement(3036413..3036715) 1 NC_008435.1 hypothetical protein 3036715 4360395 RPE_2716 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781633.1 3036413 R 316055 CDS YP_781634.1 115524723 4360396 complement(3037331..3037627) 1 NC_008435.1 KEGG: fra:Francci3_1958 integrase; integrase 3037627 4360396 RPE_2717 Rhodopseudomonas palustris BisA53 integrase YP_781634.1 3037331 R 316055 CDS YP_781635.1 115524724 4360397 3037930..3038751 1 NC_008435.1 PFAM: Secretin/TonB, short N-terminal domain; KEGG: rpb:RPB_3129 secretin/TonB, short-like protein; secretin/TonB short N-terminal domain-containing protein 3038751 4360397 RPE_2718 Rhodopseudomonas palustris BisA53 secretin/TonB short N-terminal domain-containing protein YP_781635.1 3037930 D 316055 CDS YP_781636.1 115524725 4360398 3038915..3039460 1 NC_008435.1 PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_3128 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 3039460 4360398 RPE_2719 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_781636.1 3038915 D 316055 CDS YP_781637.1 115524726 4360399 3039537..3040517 1 NC_008435.1 PFAM: FecR protein; KEGG: rpb:RPB_3127 putative FecR; putative FecR protein 3040517 4360399 RPE_2720 Rhodopseudomonas palustris BisA53 putative FecR protein YP_781637.1 3039537 D 316055 CDS YP_781638.1 115524727 4360400 3040637..3052345 1 NC_008435.1 KEGG: bur:Bcep18194_B1068 haemagglutinin-like; hypothetical protein 3052345 4360400 RPE_2721 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781638.1 3040637 D 316055 CDS YP_781639.1 115524728 4360402 3053125..3058341 1 NC_008435.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: rpc:RPC_2542 alpha-2-macroglobulin-like; alpha-2-macroglobulin domain-containing protein 3058341 4360402 RPE_2722 Rhodopseudomonas palustris BisA53 alpha-2-macroglobulin domain-containing protein YP_781639.1 3053125 D 316055 CDS YP_781640.1 115524729 4360403 3058338..3060530 1 NC_008435.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; Penicillin-binding domain protein; KEGG: rpa:RPA2554 penicillin binding protein; penicillin-binding protein 1C 3060530 4360403 RPE_2723 Rhodopseudomonas palustris BisA53 penicillin-binding protein 1C YP_781640.1 3058338 D 316055 CDS YP_781641.1 115524730 4360404 3060581..3062320 1 NC_008435.1 PFAM: glycosyl transferase, family 39; KEGG: rpc:RPC_2544 glycosyl transferase, family 39; glycosyl transferase family protein 3062320 4360404 RPE_2724 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_781641.1 3060581 D 316055 CDS YP_781642.1 115524731 4360405 3062331..3063176 1 NC_008435.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: rpc:RPC_2545 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 3063176 4360405 RPE_2725 Rhodopseudomonas palustris BisA53 PA-phosphatase-like phosphoesterase YP_781642.1 3062331 D 316055 CDS YP_781643.1 115524732 4360406 3063249..3063989 1 NC_008435.1 PFAM: glycosyl transferase, family 2; KEGG: rpc:RPC_2546 glycosyl transferase, family 2; glycosyl transferase family protein 3063989 4360406 RPE_2726 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_781643.1 3063249 D 316055 CDS YP_781644.1 115524733 4360407 3063989..3064327 1 NC_008435.1 PFAM: lipid A biosynthesis domain protein; KEGG: rpb:RPB_2914 lipid A biosynthesis-like; lipid A biosynthesis domain-containing protein 3064327 4360407 RPE_2727 Rhodopseudomonas palustris BisA53 lipid A biosynthesis domain-containing protein YP_781644.1 3063989 D 316055 CDS YP_781645.1 115524734 4360408 complement(3064354..3065541) 1 NC_008435.1 TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: rpc:RPC_2548 cystathionine beta-lyase; cystathionine beta-lyase 3065541 4360408 RPE_2728 Rhodopseudomonas palustris BisA53 cystathionine beta-lyase YP_781645.1 3064354 R 316055 CDS YP_781646.1 115524735 4360409 3065874..3066887 1 NC_008435.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein, family 3; KEGG: rpc:RPC_2549 lysine-arginine-ornithine-binding periplasmic protein; cationic amino acid ABC transporter periplasmic binding protein 3066887 4360409 RPE_2729 Rhodopseudomonas palustris BisA53 cationic amino acid ABC transporter periplasmic binding protein YP_781646.1 3065874 D 316055 CDS YP_781647.1 115524736 4360410 3066906..3068111 1 NC_008435.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_2550 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit 3068111 4360410 RPE_2730 Rhodopseudomonas palustris BisA53 polar amino acid ABC transporter inner membrane subunit YP_781647.1 3066906 D 316055 CDS YP_781648.1 115524737 4360411 3068108..3069610 1 NC_008435.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_2551 amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; polar amino acid ABC transporter inner membrane subunit 3069610 4360411 RPE_2731 Rhodopseudomonas palustris BisA53 polar amino acid ABC transporter inner membrane subunit YP_781648.1 3068108 D 316055 CDS YP_781649.1 115524738 4360412 3069627..3070367 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2561 ABC transporter related; ABC transporter-like protein 3070367 4360412 RPE_2732 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_781649.1 3069627 D 316055 CDS YP_781650.1 115524739 4360413 complement(3071093..3071377) 1 NC_008435.1 KEGG: rpd:RPD_2562 hypothetical protein; hypothetical protein 3071377 4360413 RPE_2733 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781650.1 3071093 R 316055 CDS YP_781651.1 115524740 4360414 complement(3071694..3072731) 1 NC_008435.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 3072731 4360414 RPE_2734 Rhodopseudomonas palustris BisA53 cysteine synthase A YP_781651.1 3071694 R 316055 CDS YP_781652.1 115524741 4360415 complement(3072840..3074066) 1 NC_008435.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_2554 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3074066 4360415 RPE_2735 Rhodopseudomonas palustris BisA53 cyclopropane-fatty-acyl-phospholipid synthase YP_781652.1 3072840 R 316055 CDS YP_781653.1 115524742 4360416 complement(3074189..3075016) 1 NC_008435.1 PFAM: protein of unknown function DUF1365; KEGG: rpc:RPC_2555 protein of unknown function DUF1365; hypothetical protein 3075016 4360416 RPE_2736 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781653.1 3074189 R 316055 CDS YP_781654.1 115524743 4360417 complement(3075020..3076330) 1 NC_008435.1 PFAM: amine oxidase; KEGG: rpb:RPB_2904 amine oxidase; amine oxidase 3076330 4360417 RPE_2737 Rhodopseudomonas palustris BisA53 amine oxidase YP_781654.1 3075020 R 316055 CDS YP_781655.1 115524744 4360418 3076334..3076576 1 NC_008435.1 hypothetical protein 3076576 4360418 RPE_2738 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781655.1 3076334 D 316055 CDS YP_781656.1 115524745 4360419 3076743..3078164 1 NC_008435.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rpc:RPC_2557 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system outer membrane lipoprotein 3078164 4360419 RPE_2739 Rhodopseudomonas palustris BisA53 RND efflux system outer membrane lipoprotein YP_781656.1 3076743 D 316055 CDS YP_781657.1 115524746 4360420 3078154..3079434 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_2558 secretion protein HlyD; RND family efflux transporter MFP subunit 3079434 4360420 RPE_2740 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_781657.1 3078154 D 316055 CDS YP_781658.1 115524747 4360421 3079448..3082570 1 NC_008435.1 PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2559 acriflavin resistance protein; acriflavin resistance protein 3082570 4360421 RPE_2741 Rhodopseudomonas palustris BisA53 acriflavin resistance protein YP_781658.1 3079448 D 316055 CDS YP_781659.1 115524748 4360422 3082570..3085674 1 NC_008435.1 PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2560 acriflavin resistance protein; acriflavin resistance protein 3085674 4360422 RPE_2742 Rhodopseudomonas palustris BisA53 acriflavin resistance protein YP_781659.1 3082570 D 316055 CDS YP_781660.1 115524749 4360423 3085723..3086457 1 NC_008435.1 PFAM: DTW domain containing protein; KEGG: rpc:RPC_2561 DTW; DTW domain-containing protein 3086457 4360423 RPE_2743 Rhodopseudomonas palustris BisA53 DTW domain-containing protein YP_781660.1 3085723 D 316055 CDS YP_781661.1 115524750 4360425 3086954..3087154 1 NC_008435.1 KEGG: bja:bsl2206 hypothetical protein; hypothetical protein 3087154 4360425 RPE_2744 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781661.1 3086954 D 316055 CDS YP_781662.1 115524751 4360426 complement(3087435..3087611) 1 NC_008435.1 KEGG: rpc:RPC_2563 hypothetical protein; hypothetical protein 3087611 4360426 RPE_2745 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781662.1 3087435 R 316055 CDS YP_781663.1 115524752 4360427 complement(3087825..3088190) 1 NC_008435.1 KEGG: rpc:RPC_2564 hypothetical protein; hypothetical protein 3088190 4360427 RPE_2746 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781663.1 3087825 R 316055 CDS YP_781664.1 115524753 4360429 3089123..3089791 1 NC_008435.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_2567 protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 3089791 4360429 RPE_2747 Rhodopseudomonas palustris BisA53 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_781664.1 3089123 D 316055 CDS YP_781665.1 115524754 4360430 3089980..3091377 1 NC_008435.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rpc:RPC_2568 type I secretion outer membrane protein, TolC; TolC family type I secretion outer membrane protein 3091377 4360430 RPE_2748 Rhodopseudomonas palustris BisA53 TolC family type I secretion outer membrane protein YP_781665.1 3089980 D 316055 CDS YP_781666.1 115524755 4360431 3091719..3092486 1 NC_008435.1 KEGG: rpb:RPB_2893 hypothetical protein; hypothetical protein 3092486 4360431 RPE_2749 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781666.1 3091719 D 316055 CDS YP_781667.1 115524756 4360432 3092595..3095492 1 NC_008435.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 3095492 valS 4360432 valS Rhodopseudomonas palustris BisA53 valyl-tRNA synthetase YP_781667.1 3092595 D 316055 CDS YP_781668.1 115524757 4360433 complement(3095603..3096235) 1 NC_008435.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 3096235 4360433 RPE_2751 Rhodopseudomonas palustris BisA53 3-methyladenine DNA glycosylase YP_781668.1 3095603 R 316055 CDS YP_781669.1 115524758 4360434 3096386..3097345 1 NC_008435.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3097345 4360434 RPE_2752 Rhodopseudomonas palustris BisA53 lipoyl synthase YP_781669.1 3096386 D 316055 CDS YP_781670.1 115524759 4360435 3097357..3097833 1 NC_008435.1 PFAM: cyclase/dehydrase; KEGG: rpc:RPC_2573 cyclase/dehydrase; cyclase/dehydrase 3097833 4360435 RPE_2753 Rhodopseudomonas palustris BisA53 cyclase/dehydrase YP_781670.1 3097357 D 316055 CDS YP_781671.1 115524760 4360436 complement(3097846..3098460) 1 NC_008435.1 PFAM: CinA domain protein; KEGG: rpc:RPC_2574 CinA-like; CinA domain-containing protein 3098460 4360436 RPE_2754 Rhodopseudomonas palustris BisA53 CinA domain-containing protein YP_781671.1 3097846 R 316055 CDS YP_781672.1 115524761 4360437 complement(3098460..3099656) 1 NC_008435.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: rpc:RPC_2575 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3099656 4360437 RPE_2755 Rhodopseudomonas palustris BisA53 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_781672.1 3098460 R 316055 CDS YP_781673.1 115524762 4360438 3099893..3100927 1 NC_008435.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: rpc:RPC_2576 dihydrouridine synthase TIM-barrel protein nifR3; nifR3 family TIM-barrel protein 3100927 4360438 RPE_2756 Rhodopseudomonas palustris BisA53 nifR3 family TIM-barrel protein YP_781673.1 3099893 D 316055 CDS YP_781674.1 115524763 4360439 3100924..3102093 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: rpc:RPC_2577 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase, nitrogen specific, NtrB 3102093 4360439 RPE_2757 Rhodopseudomonas palustris BisA53 signal transduction histidine kinase, nitrogen specific, NtrB YP_781674.1 3100924 D 316055 CDS YP_781675.1 115524764 4360440 3102103..3103545 1 NC_008435.1 KEGG: rpc:RPC_2578 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator NtrC 3103545 4360440 RPE_2758 Rhodopseudomonas palustris BisA53 nitrogen metabolism transcriptional regulator NtrC YP_781675.1 3102103 D 316055 CDS YP_781676.1 115524765 4360441 3103729..3106020 1 NC_008435.1 KEGG: rpc:RPC_2579 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 3106020 4360441 RPE_2759 Rhodopseudomonas palustris BisA53 multi-sensor signal transduction histidine kinase YP_781676.1 3103729 D 316055 CDS YP_781677.1 115524766 4360442 3106036..3107406 1 NC_008435.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rpc:RPC_2580 two component, sigma54 specific, transcriptional regulator, fis family; two component sigma54 specific Fis family transcriptional regulator 3107406 4360442 RPE_2760 Rhodopseudomonas palustris BisA53 two component sigma54 specific Fis family transcriptional regulator YP_781677.1 3106036 D 316055 CDS YP_781678.1 115524767 4360443 3107436..3108293 1 NC_008435.1 catalyzes the transamination of D-amino acids and their alpha-keto acids; D-amino acid aminotransferase 3108293 4360443 RPE_2761 Rhodopseudomonas palustris BisA53 D-amino acid aminotransferase YP_781678.1 3107436 D 316055 CDS YP_781679.1 115524768 4360444 3108483..3108731 1 NC_008435.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 3108731 hfq 4360444 hfq Rhodopseudomonas palustris BisA53 RNA-binding protein Hfq YP_781679.1 3108483 D 316055 CDS YP_781680.1 115524769 4360445 3108743..3110110 1 NC_008435.1 PFAM: GTP-binding protein, HSR1-related; KEGG: rpc:RPC_2583 GTP-binding protein, HSR1-related; HSR1-like GTP-binding protein 3110110 4360445 RPE_2763 Rhodopseudomonas palustris BisA53 HSR1-like GTP-binding protein YP_781680.1 3108743 D 316055 CDS YP_781681.1 115524770 4360446 3110283..3113039 1 NC_008435.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 3113039 4360446 RPE_2764 Rhodopseudomonas palustris BisA53 DNA gyrase subunit A YP_781681.1 3110283 D 316055 CDS YP_781682.1 115524771 4360447 complement(3113143..3113400) 1 NC_008435.1 KEGG: rpc:RPC_2587 hypothetical protein; hypothetical protein 3113400 4360447 RPE_2765 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781682.1 3113143 R 316055 CDS YP_781683.1 115524772 4360448 3113720..3114217 1 NC_008435.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 3114217 coaD 4360448 coaD Rhodopseudomonas palustris BisA53 phosphopantetheine adenylyltransferase YP_781683.1 3113720 D 316055 CDS YP_781684.1 115524773 4360449 3114245..3114808 1 NC_008435.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rpc:RPC_2589 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 3114808 4360449 RPE_2767 Rhodopseudomonas palustris BisA53 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_781684.1 3114245 D 316055 CDS YP_781685.1 115524774 4360450 3114818..3115258 1 NC_008435.1 KEGG: rpd:RPD_2600 hypothetical protein; hypothetical protein 3115258 4360450 RPE_2768 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781685.1 3114818 D 316055 CDS YP_781686.1 115524775 4360451 3115255..3115704 1 NC_008435.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: rpc:RPC_2590 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 3115704 4360451 RPE_2769 Rhodopseudomonas palustris BisA53 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_781686.1 3115255 D 316055 CDS YP_781687.1 115524776 4360452 3115798..3116874 1 NC_008435.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 3116874 queA 4360452 queA Rhodopseudomonas palustris BisA53 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_781687.1 3115798 D 316055 CDS YP_781688.1 115524777 4360453 3116871..3118004 1 NC_008435.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 3118004 tgt 4360453 tgt Rhodopseudomonas palustris BisA53 queuine tRNA-ribosyltransferase YP_781688.1 3116871 D 316055 CDS YP_781689.1 115524778 4360454 complement(3118027..3118245) 1 NC_008435.1 KEGG: rpd:RPD_2604 hypothetical protein; hypothetical protein 3118245 4360454 RPE_2772 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781689.1 3118027 R 316055 CDS YP_781690.1 115524779 4360455 complement(3118280..3118528) 1 NC_008435.1 hypothetical protein 3118528 4360455 RPE_2773 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781690.1 3118280 R 316055 CDS YP_781691.1 115524780 4360456 3118558..3119538 1 NC_008435.1 TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rpc:RPC_2594 cysteine synthase A; cysteine synthase 3119538 4360456 RPE_2774 Rhodopseudomonas palustris BisA53 cysteine synthase YP_781691.1 3118558 D 316055 CDS YP_781692.1 115524781 4360457 3119616..3119855 1 NC_008435.1 KEGG: rpc:RPC_2595 hypothetical protein; hypothetical protein 3119855 4360457 RPE_2775 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781692.1 3119616 D 316055 CDS YP_781693.1 115524782 4360458 3120132..3120329 1 NC_008435.1 KEGG: rpb:RPB_2864 hypothetical protein; hypothetical protein 3120329 4360458 RPE_2776 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781693.1 3120132 D 316055 CDS YP_781694.1 115524783 4360459 complement(3120426..3120791) 1 NC_008435.1 KEGG: rpc:RPC_2598 hypothetical protein; hypothetical protein 3120791 4360459 RPE_2777 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781694.1 3120426 R 316055 CDS YP_781695.1 115524784 4360460 complement(3120922..3121530) 1 NC_008435.1 PFAM: Collagen triple helix repeat; KEGG: rpc:RPC_2599 collagen triple helix repeat; triple helix repeat-containing collagen 3121530 4360460 RPE_2778 Rhodopseudomonas palustris BisA53 triple helix repeat-containing collagen YP_781695.1 3120922 R 316055 CDS YP_781696.1 115524785 4360461 3122169..3122591 1 NC_008435.1 hypothetical protein 3122591 4360461 RPE_2779 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781696.1 3122169 D 316055 CDS YP_781697.1 115524786 4360463 complement(3122914..3125733) 1 NC_008435.1 PFAM: glycosyl transferase, family 2; KEGG: rpc:RPC_2600 glycosyl transferase, family 2; glycosyl transferase family protein 3125733 4360463 RPE_2780 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_781697.1 3122914 R 316055 CDS YP_781698.1 115524787 4360464 complement(3125916..3126473) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_2601 hypothetical protein; hypothetical protein 3126473 4360464 RPE_2781 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781698.1 3125916 R 316055 CDS YP_781699.1 115524788 4360465 3126679..3128337 1 NC_008435.1 KEGG: rpc:RPC_2602 putative beta (1-6) glucans synthase; putative beta (1-6) glucans synthase 3128337 4360465 RPE_2782 Rhodopseudomonas palustris BisA53 putative beta (1-6) glucans synthase YP_781699.1 3126679 D 316055 CDS YP_781700.1 115524789 4360466 complement(3128297..3128677) 1 NC_008435.1 KEGG: rpc:RPC_2603 hypothetical protein; hypothetical protein 3128677 4360466 RPE_2783 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781700.1 3128297 R 316055 CDS YP_781701.1 115524790 4360467 complement(3128742..3130139) 1 NC_008435.1 KEGG: rpc:RPC_2604 hypothetical protein; hypothetical protein 3130139 4360467 RPE_2784 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781701.1 3128742 R 316055 CDS YP_781702.1 115524791 4360468 3130307..3131665 1 NC_008435.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 3131665 glmU 4360468 glmU Rhodopseudomonas palustris BisA53 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_781702.1 3130307 D 316055 CDS YP_781703.1 115524792 4360469 3131814..3133643 1 NC_008435.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 3133643 4360469 RPE_2786 Rhodopseudomonas palustris BisA53 glucosamine--fructose-6-phosphate aminotransferase YP_781703.1 3131814 D 316055 CDS YP_781704.1 115524793 4360470 3133887..3134690 1 NC_008435.1 PFAM: protein of unknown function DUF502; KEGG: rpd:RPD_2619 protein of unknown function DUF502; hypothetical protein 3134690 4360470 RPE_2787 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781704.1 3133887 D 316055 CDS YP_781705.1 115524794 4360471 complement(3134701..3136800) 1 NC_008435.1 PFAM: helicase domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; DEAD/DEAH box helicase domain protein; KEGG: rpc:RPC_2608 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 3136800 4360471 RPE_2788 Rhodopseudomonas palustris BisA53 DEAD/DEAH box helicase YP_781705.1 3134701 R 316055 CDS YP_781706.1 115524795 4360472 3136959..3137249 1 NC_008435.1 PFAM: protein of unknown function DUF339; KEGG: rpd:RPD_2621 protein of unknown function DUF339; hypothetical protein 3137249 4360472 RPE_2789 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781706.1 3136959 D 316055 CDS YP_781707.1 115524796 4360473 3137246..3140785 1 NC_008435.1 TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: rpc:RPC_2610 transcription-repair coupling factor; transcription-repair coupling factor 3140785 4360473 RPE_2790 Rhodopseudomonas palustris BisA53 transcription-repair coupling factor YP_781707.1 3137246 D 316055 CDS YP_781708.1 115524797 4360474 complement(3140792..3142027) 1 NC_008435.1 KEGG: rpc:RPC_2611 hypothetical protein; hypothetical protein 3142027 4360474 RPE_2791 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781708.1 3140792 R 316055 CDS YP_781709.1 115524798 4360475 complement(3142080..3143612) 1 NC_008435.1 KEGG: rpc:RPC_2612 putative acid-CoA ligase; putative acid-CoA ligase 3143612 4360475 RPE_2792 Rhodopseudomonas palustris BisA53 putative acid-CoA ligase YP_781709.1 3142080 R 316055 CDS YP_781710.1 115524799 4360476 complement(3143617..3145470) 1 NC_008435.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rpc:RPC_2613 extracellular solute-binding protein, family 5; extracellular solute-binding protein 3145470 4360476 RPE_2793 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_781710.1 3143617 R 316055 CDS YP_781711.1 115524800 4360477 3145705..3146481 1 NC_008435.1 PFAM: Invasion associated locus B family protein; KEGG: rpc:RPC_2614 invasion associated locus B; invasion associated locus B 3146481 4360477 RPE_2794 Rhodopseudomonas palustris BisA53 invasion associated locus B YP_781711.1 3145705 D 316055 CDS YP_781712.1 115524801 4360478 complement(3146577..3146909) 1 NC_008435.1 TIGRFAM: hemimethylated DNA binding protein; KEGG: rpa:RPA2669 hypothetical protein; hemimethylated DNA-binding region 3146909 4360478 RPE_2795 Rhodopseudomonas palustris BisA53 hemimethylated DNA-binding region YP_781712.1 3146577 R 316055 CDS YP_781713.1 115524802 4360479 3147011..3147973 1 NC_008435.1 PFAM: Auxin Efflux Carrier; KEGG: rpc:RPC_2616 auxin efflux carrier; auxin efflux carrier 3147973 4360479 RPE_2796 Rhodopseudomonas palustris BisA53 auxin efflux carrier YP_781713.1 3147011 D 316055 CDS YP_781714.1 115524803 4360480 complement(3147982..3149184) 1 NC_008435.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; KEGG: rpc:RPC_2617 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-6-methoxyphenyl hydroxylase 3149184 4360480 RPE_2797 Rhodopseudomonas palustris BisA53 2-octaprenyl-6-methoxyphenyl hydroxylase YP_781714.1 3147982 R 316055 CDS YP_781715.1 115524804 4360481 3149303..3150037 1 NC_008435.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpc:RPC_2618 phosphatidylcholine synthase; phosphatidylcholine synthase 3150037 4360481 RPE_2798 Rhodopseudomonas palustris BisA53 phosphatidylcholine synthase YP_781715.1 3149303 D 316055 CDS YP_781716.1 115524805 4360482 3150034..3150789 1 NC_008435.1 PFAM: Integral membrane protein TerC; KEGG: bja:bll4584 hypothetical protein; integral membrane protein TerC 3150789 4360482 RPE_2799 Rhodopseudomonas palustris BisA53 integral membrane protein TerC YP_781716.1 3150034 D 316055 CDS YP_781717.1 115524806 4360483 3150844..3151818 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_2619 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 3151818 4360483 RPE_2800 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_781717.1 3150844 D 316055 CDS YP_781718.1 115524807 4360484 3152618..3152824 1 NC_008435.1 KEGG: rpd:RPD_2667 hypothetical protein; hypothetical protein 3152824 4360484 RPE_2801 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781718.1 3152618 D 316055 CDS YP_781719.1 115524808 4360485 3152885..3154705 1 NC_008435.1 KEGG: dar:Daro_1107 hypothetical protein; hypothetical protein 3154705 4360485 RPE_2802 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781719.1 3152885 D 316055 CDS YP_781720.1 115524809 4360486 complement(3154772..3154966) 1 NC_008435.1 PFAM: plasmid stabilization system; plasmid stabilization system protein 3154966 4360486 RPE_2803 Rhodopseudomonas palustris BisA53 plasmid stabilization system protein YP_781720.1 3154772 R 316055 CDS YP_781721.1 115524810 4360487 complement(3155054..3155341) 1 NC_008435.1 KEGG: rpc:RPC_2160 hypothetical protein; hypothetical protein 3155341 4360487 RPE_2804 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781721.1 3155054 R 316055 CDS YP_781722.1 115524811 4360488 complement(3155618..3155827) 1 NC_008435.1 KEGG: sme:SMc00686 hypothetical protein; hypothetical protein 3155827 4360488 RPE_2805 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781722.1 3155618 R 316055 CDS YP_781723.1 115524812 4360489 complement(3155969..3156403) 1 NC_008435.1 KEGG: rpc:RPC_2657 hypothetical protein; hypothetical protein 3156403 4360489 RPE_2806 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781723.1 3155969 R 316055 CDS YP_781724.1 115524813 4360490 3156688..3157617 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: bja:blr1253 dehydrogenase; short-chain dehydrogenase/reductase SDR 3157617 4360490 RPE_2807 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_781724.1 3156688 D 316055 CDS YP_781725.1 115524814 4360491 3157953..3159254 1 NC_008435.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3159254 glyA 4360491 glyA Rhodopseudomonas palustris BisA53 serine hydroxymethyltransferase YP_781725.1 3157953 D 316055 CDS YP_781726.1 115524815 4360492 3159408..3159890 1 NC_008435.1 TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone domain protein; KEGG: rpc:RPC_2660 protein of unknown function DUF193; transcriptional regulator NrdR 3159890 nrdR 4360492 nrdR Rhodopseudomonas palustris BisA53 transcriptional regulator NrdR YP_781726.1 3159408 D 316055 CDS YP_781727.1 115524816 4360493 3159887..3161038 1 NC_008435.1 KEGG: rpc:RPC_2661 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD 3161038 4360493 RPE_2810 Rhodopseudomonas palustris BisA53 riboflavin biosynthesis protein RibD YP_781727.1 3159887 D 316055 CDS YP_781728.1 115524817 4360494 3161038..3161646 1 NC_008435.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3161646 4360494 RPE_2811 Rhodopseudomonas palustris BisA53 riboflavin synthase subunit alpha YP_781728.1 3161038 D 316055 CDS YP_781729.1 115524818 4360495 3161791..3162282 1 NC_008435.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3162282 ribH 4360495 ribH Rhodopseudomonas palustris BisA53 6,7-dimethyl-8-ribityllumazine synthase YP_781729.1 3161791 D 316055 CDS YP_781730.1 115524819 4360496 3162288..3162812 1 NC_008435.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3162812 nusB 4360496 nusB Rhodopseudomonas palustris BisA53 transcription antitermination protein NusB YP_781730.1 3162288 D 316055 CDS YP_781731.1 115524820 4360497 3163073..3164044 1 NC_008435.1 KEGG: rpd:RPD_2677 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase 3164044 4360497 RPE_2814 Rhodopseudomonas palustris BisA53 thiamine-monophosphate kinase YP_781731.1 3163073 D 316055 CDS YP_781732.1 115524821 4360498 3164262..3166385 1 NC_008435.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 3166385 hppA 4360498 hppA Rhodopseudomonas palustris BisA53 membrane-bound proton-translocating pyrophosphatase YP_781732.1 3164262 D 316055 CDS YP_781733.1 115524822 4360499 3166483..3166638 1 NC_008435.1 KEGG: rpa:RPA2733 hypothetical protein; hypothetical protein 3166638 4360499 RPE_2816 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781733.1 3166483 D 316055 CDS YP_781734.1 115524823 4360500 3166727..3167605 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpd:RPD_2679 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3167605 4360500 RPE_2817 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_781734.1 3166727 D 316055 CDS YP_781735.1 115524824 4360501 3167763..3170120 1 NC_008435.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: bja:bll6183 hypothetical protein; TonB-dependent receptor 3170120 4360501 RPE_2818 Rhodopseudomonas palustris BisA53 TonB-dependent receptor YP_781735.1 3167763 D 316055 CDS YP_781736.1 115524825 4360502 complement(3170138..3171532) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: bja:bll6184 two-component sensor histidine kinase; signal transduction histidine kinase, glucose-6-phosphate specific 3171532 4360502 RPE_2819 Rhodopseudomonas palustris BisA53 signal transduction histidine kinase, glucose-6-phosphate specific YP_781736.1 3170138 R 316055 CDS YP_781737.1 115524826 4360503 3171695..3172327 1 NC_008435.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: bja:blr6185 two-component response regulator; two component LuxR family transcriptional regulator 3172327 4360503 RPE_2820 Rhodopseudomonas palustris BisA53 two component LuxR family transcriptional regulator YP_781737.1 3171695 D 316055 CDS YP_781738.1 115524827 4360504 3172581..3173483 1 NC_008435.1 KEGG: bja:bll3470 hypothetical protein; dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein 3173483 4360504 RPE_2821 Rhodopseudomonas palustris BisA53 dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein YP_781738.1 3172581 D 316055 CDS YP_781739.1 115524828 4360505 complement(3173517..3174026) 1 NC_008435.1 PFAM: SmpA/OmlA domain protein; KEGG: rpc:RPC_2672 SmpA/OmlA; SmpA/OmlA domain-containing protein 3174026 4360505 RPE_2822 Rhodopseudomonas palustris BisA53 SmpA/OmlA domain-containing protein YP_781739.1 3173517 R 316055 CDS YP_781740.1 115524829 4360506 3174110..3174661 1 NC_008435.1 PFAM: Ubiquinol-cytochrome C chaperone; KEGG: rpc:RPC_2673 ubiquinol-cytochrome c chaperone; ubiquinol-cytochrome C chaperone 3174661 4360506 RPE_2823 Rhodopseudomonas palustris BisA53 ubiquinol-cytochrome C chaperone YP_781740.1 3174110 D 316055 CDS YP_781741.1 115524830 4360507 3174685..3175269 1 NC_008435.1 KEGG: rpc:RPC_2674 hypothetical protein; hypothetical protein 3175269 4360507 RPE_2824 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781741.1 3174685 D 316055 CDS YP_781742.1 115524831 4360508 3175532..3176581 1 NC_008435.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 3176581 4360508 RPE_2825 Rhodopseudomonas palustris BisA53 putative glycerol-3-phosphate acyltransferase PlsX YP_781742.1 3175532 D 316055 CDS YP_781743.1 115524832 4360509 3176594..3177571 1 NC_008435.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 3177571 4360509 RPE_2826 Rhodopseudomonas palustris BisA53 3-oxoacyl-ACP synthase YP_781743.1 3176594 D 316055 CDS YP_781744.1 115524833 4360510 3177703..3178044 1 NC_008435.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 3178044 ihfA 4360510 ihfA Rhodopseudomonas palustris BisA53 integration host factor subunit alpha YP_781744.1 3177703 D 316055 CDS YP_781745.1 115524834 4360511 3178068..3178664 1 NC_008435.1 PFAM: regulatory protein, MerR; KEGG: rpc:RPC_2678 transcriptional regulator, MerR family; MerR family transcriptional regulator 3178664 4360511 RPE_2828 Rhodopseudomonas palustris BisA53 MerR family transcriptional regulator YP_781745.1 3178068 D 316055 CDS YP_781746.1 115524835 4360512 3178791..3179597 1 NC_008435.1 PFAM: protein of unknown function DUF1212; KEGG: rpc:RPC_2893 protein of unknown function DUF1212; hypothetical protein 3179597 4360512 RPE_2829 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781746.1 3178791 D 316055 CDS YP_781747.1 115524836 4360513 3179606..3180076 1 NC_008435.1 KEGG: rpc:RPC_2892 hypothetical protein; hypothetical protein 3180076 4360513 RPE_2830 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781747.1 3179606 D 316055 CDS YP_781748.1 115524837 4360514 complement(3180162..3180341) 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpa:RPA1492 light harvesting protein B-800-850, alpha chain E (antenna pigment protein, alpha chain E) (LH II-E alpha); antenna complex subunit alpha/beta 3180341 4360514 RPE_2831 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_781748.1 3180162 R 316055 CDS YP_781749.1 115524838 4360515 complement(3180356..3180496) 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_0219 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 3180496 4360515 RPE_2832 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_781749.1 3180356 R 316055 CDS YP_781750.1 115524839 4360516 3180948..3181376 1 NC_008435.1 KEGG: nha:Nham_4263 hypothetical protein; hypothetical protein 3181376 4360516 RPE_2833 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781750.1 3180948 D 316055 CDS YP_781751.1 115524840 4360518 3181683..3182057 1 NC_008435.1 hypothetical protein 3182057 4360518 RPE_2834 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781751.1 3181683 D 316055 CDS YP_781752.1 115524841 4360519 3182260..3182964 1 NC_008435.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: bja:bll2244 probable cAMP-regulatory protein; Crp/FNR family transcriptional regulator 3182964 4360519 RPE_2835 Rhodopseudomonas palustris BisA53 Crp/FNR family transcriptional regulator YP_781752.1 3182260 D 316055 CDS YP_781753.1 115524842 4360520 3183014..3183205 1 NC_008435.1 hypothetical protein 3183205 4360520 RPE_2836 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781753.1 3183014 D 316055 CDS YP_781754.1 115524843 4360521 complement(3183221..3184159) 1 NC_008435.1 PFAM: ABC-3 protein; KEGG: jan:Jann_2083 ABC-3; ABC-3 protein 3184159 4360521 RPE_2837 Rhodopseudomonas palustris BisA53 ABC-3 protein YP_781754.1 3183221 R 316055 CDS YP_781755.1 115524844 4360522 complement(3184156..3185364) 1 NC_008435.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: jan:Jann_2082 ABC-3; ABC-3 protein 3185364 4360522 RPE_2838 Rhodopseudomonas palustris BisA53 ABC-3 protein YP_781755.1 3184156 R 316055 CDS YP_781756.1 115524845 4360523 complement(3185380..3186210) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sil:SPO3365 zinc/manganese/iron ABC transporter, ATP-binding protein; ABC transporter-like protein 3186210 4360523 RPE_2839 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_781756.1 3185380 R 316055 CDS YP_781757.1 115524846 4360524 complement(3186207..3187196) 1 NC_008435.1 PFAM: periplasmic solute binding protein; KEGG: sil:SPO3366 zinc/manganese/iron ABC transporter, periplasmic zinc/manganese/iron-binding protein; periplasmic solute binding protein 3187196 4360524 RPE_2840 Rhodopseudomonas palustris BisA53 periplasmic solute binding protein YP_781757.1 3186207 R 316055 CDS YP_781758.1 115524847 4360525 complement(3187406..3187720) 1 NC_008435.1 KEGG: rpc:RPC_2681 hypothetical protein; hypothetical protein 3187720 4360525 RPE_2841 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781758.1 3187406 R 316055 CDS YP_781759.1 115524848 4360526 complement(3187940..3189526) 1 NC_008435.1 PFAM: sugar transferase; KEGG: rpd:RPD_2694 sugar transferase; sugar transferase 3189526 4360526 RPE_2842 Rhodopseudomonas palustris BisA53 sugar transferase YP_781759.1 3187940 R 316055 CDS YP_781760.1 115524849 4360527 complement(3189575..3190738) 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: rpc:RPC_2683 glycosyl transferase, group 1; group 1 glycosyl transferase 3190738 4360527 RPE_2843 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_781760.1 3189575 R 316055 CDS YP_781761.1 115524850 4360528 complement(3190738..3191343) 1 NC_008435.1 PFAM: polysaccharide export protein; KEGG: rpc:RPC_4940 polysaccharide export protein; polysaccharide export protein 3191343 4360528 RPE_2844 Rhodopseudomonas palustris BisA53 polysaccharide export protein YP_781761.1 3190738 R 316055 CDS YP_781762.1 115524851 4360529 3191520..3193874 1 NC_008435.1 PFAM: lipopolysaccharide biosynthesis; KEGG: rpc:RPC_2684 lipopolysaccharide biosynthesis; lipopolysaccharide biosynthesis protein 3193874 4360529 RPE_2845 Rhodopseudomonas palustris BisA53 lipopolysaccharide biosynthesis protein YP_781762.1 3191520 D 316055 CDS YP_781763.1 115524852 4360530 complement(3193875..3195074) 1 NC_008435.1 KEGG: rpc:RPC_2685 hypothetical protein; hypothetical protein 3195074 4360530 RPE_2846 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781763.1 3193875 R 316055 CDS YP_781764.1 115524853 4360531 3195200..3196204 1 NC_008435.1 PFAM: polysaccharide deacetylase; KEGG: rpd:RPD_2699 polysaccharide deacetylase; polysaccharide deacetylase 3196204 4360531 RPE_2847 Rhodopseudomonas palustris BisA53 polysaccharide deacetylase YP_781764.1 3195200 D 316055 CDS YP_781765.1 115524854 4360532 complement(3196211..3196420) 1 NC_008435.1 KEGG: rpc:RPC_2686 hypothetical protein; hypothetical protein 3196420 4360532 RPE_2848 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781765.1 3196211 R 316055 CDS YP_781766.1 115524855 4360533 3196514..3197602 1 NC_008435.1 PFAM: cytochrome oxidase assembly; KEGG: rpc:RPC_2687 cytochrome oxidase assembly; cytochrome oxidase assembly 3197602 4360533 RPE_2849 Rhodopseudomonas palustris BisA53 cytochrome oxidase assembly YP_781766.1 3196514 D 316055 CDS YP_781767.1 115524856 4360534 complement(3197610..3197966) 1 NC_008435.1 PFAM: protein of unknown function DUF190; KEGG: rpc:RPC_2688 protein of unknown function DUF190; hypothetical protein 3197966 4360534 RPE_2850 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781767.1 3197610 R 316055 CDS YP_781768.1 115524857 4360535 complement(3197969..3198406) 1 NC_008435.1 PFAM: Camphor resistance CrcB protein; KEGG: rpc:RPC_2689 CrcB protein; camphor resistance CrcB protein 3198406 4360535 RPE_2851 Rhodopseudomonas palustris BisA53 camphor resistance CrcB protein YP_781768.1 3197969 R 316055 CDS YP_781769.1 115524858 4360536 complement(3198403..3198804) 1 NC_008435.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3198804 4360536 RPE_2852 Rhodopseudomonas palustris BisA53 camphor resistance protein CrcB YP_781769.1 3198403 R 316055 CDS YP_781770.1 115524859 4360537 complement(3198827..3200107) 1 NC_008435.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 3200107 4360537 RPE_2853 Rhodopseudomonas palustris BisA53 O-acetylhomoserine aminocarboxypropyltransferase YP_781770.1 3198827 R 316055 CDS YP_781771.1 115524860 4360538 complement(3200214..3200798) 1 NC_008435.1 PFAM: CoA-binding domain protein; KEGG: rpb:RPB_2668 CoA-binding; CoA-binding domain-containing protein 3200798 4360538 RPE_2854 Rhodopseudomonas palustris BisA53 CoA-binding domain-containing protein YP_781771.1 3200214 R 316055 CDS YP_781772.1 115524861 4360539 complement(3200944..3201768) 1 NC_008435.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3201768 4360539 RPE_2855 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase YP_781772.1 3200944 R 316055 CDS YP_781773.1 115524862 4360540 3201856..3202287 1 NC_008435.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_2695 phenylacetic acid degradation-related protein; hypothetical protein 3202287 4360540 RPE_2856 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781773.1 3201856 D 316055 CDS YP_781774.2 162134981 4360541 3202444..3202908 1 NC_008435.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 3202908 rplM 4360541 rplM Rhodopseudomonas palustris BisA53 50S ribosomal protein L13 YP_781774.2 3202444 D 316055 CDS YP_781775.1 115524864 4360542 3202908..3203384 1 NC_008435.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 3203384 rpsI 4360542 rpsI Rhodopseudomonas palustris BisA53 30S ribosomal protein S9 YP_781775.1 3202908 D 316055 CDS YP_781776.1 115524865 4360543 3203599..3204855 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_2698 diguanylate cyclase (GGDEF domain); diguanylate cyclase 3204855 4360543 RPE_2859 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_781776.1 3203599 D 316055 CDS YP_781777.1 115524866 4360544 3204948..3205250 1 NC_008435.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rpc:RPC_2699 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3205250 4360544 RPE_2860 Rhodopseudomonas palustris BisA53 antibiotic biosynthesis monooxygenase YP_781777.1 3204948 D 316055 CDS YP_781778.1 115524867 4360545 complement(3205247..3206380) 1 NC_008435.1 PFAM: protein of unknown function UPF0118; KEGG: rpc:RPC_2700 protein of unknown function UPF0118; hypothetical protein 3206380 4360545 RPE_2861 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781778.1 3205247 R 316055 CDS YP_781779.1 115524868 4360546 3206683..3207615 1 NC_008435.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: rpc:RPC_2701 rare lipoprotein A; rare lipoprotein A 3207615 4360546 RPE_2862 Rhodopseudomonas palustris BisA53 rare lipoprotein A YP_781779.1 3206683 D 316055 CDS YP_781780.1 115524869 4360547 complement(3207636..3208583) 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpd:RPD_2713 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3208583 4360547 RPE_2863 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_781780.1 3207636 R 316055 CDS YP_781781.1 115524870 4360548 3208739..3209995 1 NC_008435.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: rpc:RPC_2702 serine-type D-Ala-D-Ala carboxypeptidase; Serine-type D-Ala-D-Ala carboxypeptidase 3209995 4360548 RPE_2864 Rhodopseudomonas palustris BisA53 Serine-type D-Ala-D-Ala carboxypeptidase YP_781781.1 3208739 D 316055 CDS YP_781782.1 115524871 4360549 3209998..3210687 1 NC_008435.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 3210687 4360549 RPE_2865 Rhodopseudomonas palustris BisA53 thymidylate kinase YP_781782.1 3209998 D 316055 CDS YP_781783.1 115524872 4360550 3210684..3211730 1 NC_008435.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 3211730 4360550 RPE_2866 Rhodopseudomonas palustris BisA53 DNA polymerase III subunit delta' YP_781783.1 3210684 D 316055 CDS YP_781784.1 115524873 4360551 3211803..3213359 1 NC_008435.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 3213359 4360551 RPE_2867 Rhodopseudomonas palustris BisA53 methionyl-tRNA synthetase YP_781784.1 3211803 D 316055 CDS YP_781785.1 115524874 4360552 3213368..3214156 1 NC_008435.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: rpa:RPA2778 possible deoxyribonuclease; TatD family hydrolase 3214156 4360552 RPE_2868 Rhodopseudomonas palustris BisA53 TatD family hydrolase YP_781785.1 3213368 D 316055 CDS YP_781786.1 115524875 4360553 3214153..3214950 1 NC_008435.1 KEGG: rpa:RPA2779 possible hydrolase; putative hydrolase 3214950 4360553 RPE_2869 Rhodopseudomonas palustris BisA53 putative hydrolase YP_781786.1 3214153 D 316055 CDS YP_781787.1 115524876 4360554 complement(3215099..3215962) 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpa:RPA0809 transcriptional regulator, LysR family; LysR family transcriptional regulator 3215962 4360554 RPE_2870 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_781787.1 3215099 R 316055 CDS YP_781788.1 115524877 4360555 3216145..3217152 1 NC_008435.1 KEGG: sil:SPO2657 ACC deaminase/D-cysteine desulfhydrase family; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; D-cysteine desulfhydrase 3217152 4360555 RPE_2871 Rhodopseudomonas palustris BisA53 D-cysteine desulfhydrase YP_781788.1 3216145 D 316055 CDS YP_781789.1 115524878 4360556 3217166..3218764 1 NC_008435.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bpm:BURPS1710b_0969 major facilitator family transporter; major facilitator transporter 3218764 4360556 RPE_2872 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_781789.1 3217166 D 316055 CDS YP_781790.1 115524879 4360557 3218825..3219391 1 NC_008435.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cvi:CV0615 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3219391 4360557 RPE_2873 Rhodopseudomonas palustris BisA53 glyoxalase/bleomycin resistance protein/dioxygenase YP_781790.1 3218825 D 316055 CDS YP_781791.1 115524880 4360558 complement(3219468..3221117) 1 NC_008435.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 3221117 4360558 RPE_2874 Rhodopseudomonas palustris BisA53 acyl-CoA synthetase YP_781791.1 3219468 R 316055 CDS YP_781792.1 115524881 4360559 complement(3221206..3223092) 1 NC_008435.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpb:RPB_2685 TrapT DctQ-M fusion permease, dicarboxylate transport; TRAP C4-dicarboxylate transport system permease DctM 3223092 4360559 RPE_2875 Rhodopseudomonas palustris BisA53 TRAP C4-dicarboxylate transport system permease DctM YP_781792.1 3221206 R 316055 CDS YP_781793.1 115524882 4360560 complement(3223102..3224121) 1 NC_008435.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; Twin-arginine translocation pathway signal; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpb:RPB_2686 TRAP dicarboxylate transporter DctP subunit; TRAP dicarboxylate transporter subunit DctP 3224121 4360560 RPE_2876 Rhodopseudomonas palustris BisA53 TRAP dicarboxylate transporter subunit DctP YP_781793.1 3223102 R 316055 CDS YP_781794.1 115524883 4360561 complement(3224660..3225877) 1 NC_008435.1 PFAM: sulfatase; KEGG: rpc:RPC_2738 sulfatase; sulfatase 3225877 4360561 RPE_2877 Rhodopseudomonas palustris BisA53 sulfatase YP_781794.1 3224660 R 316055 CDS YP_781795.1 115524884 4360562 3225964..3226857 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_2740 transcriptional regulator, LysR family; LysR family transcriptional regulator 3226857 4360562 RPE_2878 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_781795.1 3225964 D 316055 CDS YP_781796.1 115524885 4360563 complement(3227089..3228771) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_2742 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3228771 4360563 RPE_2879 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_781796.1 3227089 R 316055 CDS YP_781797.1 115524886 4360564 complement(3229148..3230881) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_2744 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3230881 4360564 RPE_2880 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_781797.1 3229148 R 316055 CDS YP_781798.1 115524887 4360565 3231107..3233209 1 NC_008435.1 PFAM: UvrD/REP helicase; KEGG: rpc:RPC_2745 UvrD/REP helicase; UvrD/REP helicase 3233209 4360565 RPE_2881 Rhodopseudomonas palustris BisA53 UvrD/REP helicase YP_781798.1 3231107 D 316055 CDS YP_781799.1 115524888 4360566 3233252..3233512 1 NC_008435.1 KEGG: rpc:RPC_3390 hypothetical protein; hypothetical protein 3233512 4360566 RPE_2882 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781799.1 3233252 D 316055 CDS YP_781800.1 115524889 4360567 complement(3233537..3233854) 1 NC_008435.1 KEGG: rpa:RPA2803 hypothetical protein; hypothetical protein 3233854 4360567 RPE_2883 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781800.1 3233537 R 316055 CDS YP_781801.1 115524890 4360568 complement(3233883..3234611) 1 NC_008435.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: rpc:RPC_2751 ExsB; ExsB family transcriptional regulator 3234611 4360568 RPE_2884 Rhodopseudomonas palustris BisA53 ExsB family transcriptional regulator YP_781801.1 3233883 R 316055 CDS YP_781802.1 115524891 4360569 3234724..3235548 1 NC_008435.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 3235548 mazG 4360569 mazG Rhodopseudomonas palustris BisA53 nucleoside triphosphate pyrophosphohydrolase YP_781802.1 3234724 D 316055 CDS YP_781803.1 115524892 4360570 3235666..3236988 1 NC_008435.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rpb:RPB_2711 hypothetical protein; hypothetical protein 3236988 4360570 RPE_2886 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781803.1 3235666 D 316055 CDS YP_781804.1 115524893 4360571 3236985..3237350 1 NC_008435.1 KEGG: rpb:RPB_2712 hypothetical protein; hypothetical protein 3237350 4360571 RPE_2887 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781804.1 3236985 D 316055 CDS YP_781805.1 115524894 4360572 complement(3237439..3237939) 1 NC_008435.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 3237939 4360572 RPE_2888 Rhodopseudomonas palustris BisA53 single-stranded DNA-binding protein YP_781805.1 3237439 R 316055 CDS YP_781806.1 115524895 4360573 3238392..3239135 1 NC_008435.1 KEGG: rpd:RPD_2756 putative outer membrane protein; putative outer membrane protein 3239135 4360573 RPE_2889 Rhodopseudomonas palustris BisA53 putative outer membrane protein YP_781806.1 3238392 D 316055 CDS YP_781807.1 115524896 4360574 3239381..3242446 1 NC_008435.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 3242446 uvrA 4360574 uvrA Rhodopseudomonas palustris BisA53 excinuclease ABC subunit A YP_781807.1 3239381 D 316055 CDS YP_781808.1 115524897 4360575 complement(3243376..3243672) 1 NC_008435.1 hypothetical protein 3243672 4360575 RPE_2891 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781808.1 3243376 R 316055 CDS YP_781809.1 115524898 4360576 3243939..3244154 1 NC_008435.1 KEGG: rpc:RPC_2759 hypothetical protein; hypothetical protein 3244154 4360576 RPE_2892 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781809.1 3243939 D 316055 CDS YP_781810.1 115524899 4360577 3244269..3244766 1 NC_008435.1 hypothetical protein 3244766 4360577 RPE_2893 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781810.1 3244269 D 316055 CDS YP_781811.1 115524900 4360578 3245014..3245520 1 NC_008435.1 KEGG: rpd:RPD_2764 hypothetical protein; hypothetical protein 3245520 4360578 RPE_2894 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781811.1 3245014 D 316055 CDS YP_781812.1 115524901 4360579 3245917..3246669 1 NC_008435.1 KEGG: rpc:RPC_2763 putative outer-membrane protein precursor; putative outer-membrane protein 3246669 4360579 RPE_2895 Rhodopseudomonas palustris BisA53 putative outer-membrane protein YP_781812.1 3245917 D 316055 CDS YP_781813.1 115524902 4360580 3246839..3247195 1 NC_008435.1 KEGG: rpc:RPC_2764 hypothetical protein; hypothetical protein 3247195 4360580 RPE_2896 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781813.1 3246839 D 316055 CDS YP_781814.1 115524903 4360581 3248955..3249731 1 NC_008435.1 PFAM: Ion transport protein; Ion transport 2 domain protein,; KEGG: rpc:RPC_2765 ion transport 2; Ion transport 2 domain-containing protein 3249731 4360581 RPE_2897 Rhodopseudomonas palustris BisA53 Ion transport 2 domain-containing protein YP_781814.1 3248955 D 316055 CDS YP_781815.1 115524904 4360582 complement(3249802..3249930) 1 NC_008435.1 KEGG: rpb:RPB_2721 hypothetical protein; hypothetical protein 3249930 4360582 RPE_2898 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781815.1 3249802 R 316055 CDS YP_781816.1 115524905 4360583 3250324..3250599 1 NC_008435.1 KEGG: bja:bsr4721 hypothetical protein; hypothetical protein 3250599 4360583 RPE_2899 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781816.1 3250324 D 316055 CDS YP_781817.1 115524906 4360584 complement(3250678..3251073) 1 NC_008435.1 KEGG: rpb:RPB_2725 hypothetical protein; hypothetical protein 3251073 4360584 RPE_2900 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781817.1 3250678 R 316055 CDS YP_781818.1 115524907 4360585 3251382..3252296 1 NC_008435.1 KEGG: rpd:RPD_2771 hypothetical protein; hypothetical protein 3252296 4360585 RPE_2901 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781818.1 3251382 D 316055 CDS YP_781819.1 115524908 4360586 3252716..3252868 1 NC_008435.1 PFAM: protein of unknown function DUF1127; KEGG: rpc:RPC_2771 protein of unknown function DUF1127; hypothetical protein 3252868 4360586 RPE_2902 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781819.1 3252716 D 316055 CDS YP_781820.1 115524909 4360587 3252978..3254408 1 NC_008435.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 3254408 4360587 RPE_2903 Rhodopseudomonas palustris BisA53 tRNA (uracil-5-)-methyltransferase Gid YP_781820.1 3252978 D 316055 CDS YP_781821.1 115524910 4360588 complement(3254429..3255292) 1 NC_008435.1 KEGG: rpc:RPC_2773 phytoene synthase; phytoene synthase 3255292 4360588 RPE_2904 Rhodopseudomonas palustris BisA53 phytoene synthase YP_781821.1 3254429 R 316055 CDS YP_781822.1 115524911 4360589 complement(3255303..3255689) 1 NC_008435.1 PFAM: protein of unknown function DUF498; KEGG: rpc:RPC_2774 protein of unknown function DUF498; hypothetical protein 3255689 4360589 RPE_2905 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781822.1 3255303 R 316055 CDS YP_781823.1 115524912 4360590 complement(3255689..3256693) 1 NC_008435.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3256693 secF 4360590 secF Rhodopseudomonas palustris BisA53 preprotein translocase subunit SecF YP_781823.1 3255689 R 316055 CDS YP_781824.1 115524913 4360591 complement(3256710..3258311) 1 NC_008435.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3258311 secD 4360591 secD Rhodopseudomonas palustris BisA53 preprotein translocase subunit SecD YP_781824.1 3256710 R 316055 CDS YP_781825.1 115524914 4360592 complement(3258364..3258801) 1 NC_008435.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: rpa:RPA2832 putative membrane protein, possible preprotein translocase; preprotein translocase subunit YajC 3258801 4360592 RPE_2908 Rhodopseudomonas palustris BisA53 preprotein translocase subunit YajC YP_781825.1 3258364 R 316055 CDS YP_781826.1 115524915 4360593 3258952..3259944 1 NC_008435.1 PFAM: protein of unknown function DUF815; KEGG: rpc:RPC_2778 protein of unknown function DUF815; hypothetical protein 3259944 4360593 RPE_2909 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781826.1 3258952 D 316055 CDS YP_781827.1 115524916 4360594 complement(3260099..3261004) 1 NC_008435.1 PFAM: pyruvate carboxyltransferase; KEGG: rpc:RPC_2780 pyruvate carboxyltransferase; pyruvate carboxyltransferase 3261004 4360594 RPE_2910 Rhodopseudomonas palustris BisA53 pyruvate carboxyltransferase YP_781827.1 3260099 R 316055 CDS YP_781828.1 115524917 4360595 complement(3261043..3263052) 1 NC_008435.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rpc:RPC_2781 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain, ATP-binding protein 3263052 4360595 RPE_2911 Rhodopseudomonas palustris BisA53 carbamoyl-phosphate synthase L chain, ATP-binding protein YP_781828.1 3261043 R 316055 CDS YP_781829.1 115524918 4360596 complement(3263052..3264656) 1 NC_008435.1 PFAM: carboxyl transferase; KEGG: rpc:RPC_2782 propionyl-CoA carboxylase; propionyl-CoA carboxylase 3264656 4360596 RPE_2912 Rhodopseudomonas palustris BisA53 propionyl-CoA carboxylase YP_781829.1 3263052 R 316055 CDS YP_781830.1 115524919 4360597 complement(3264802..3265137) 1 NC_008435.1 PFAM: ETC complex I subunit conserved region; KEGG: rpb:RPB_2935 ETC complex I subunit conserved region; ETC complex I subunit region 3265137 4360597 RPE_2913 Rhodopseudomonas palustris BisA53 ETC complex I subunit region YP_781830.1 3264802 R 316055 CDS YP_781831.1 115524920 4360598 3265317..3266570 1 NC_008435.1 KEGG: rpc:RPC_2784 putative OpgC protein; putative OpgC protein 3266570 4360598 RPE_2914 Rhodopseudomonas palustris BisA53 putative OpgC protein YP_781831.1 3265317 D 316055 CDS YP_781832.1 115524921 4360599 complement(3266685..3268133) 1 NC_008435.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; tryptophanase 3268133 tnaA 4360599 tnaA Rhodopseudomonas palustris BisA53 tryptophanase YP_781832.1 3266685 R 316055 CDS YP_781833.1 115524922 4360600 complement(3268445..3270181) 1 NC_008435.1 KEGG: rpc:RPC_2788 hypothetical protein; hypothetical protein 3270181 4360600 RPE_2916 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781833.1 3268445 R 316055 CDS YP_781834.1 115524923 4360602 complement(3270741..3271193) 1 NC_008435.1 PFAM: protein of unknown function DUF192; KEGG: rpc:RPC_2790 protein of unknown function DUF192; hypothetical protein 3271193 4360602 RPE_2917 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781834.1 3270741 R 316055 CDS YP_781835.1 115524924 4360603 complement(3271421..3272080) 1 NC_008435.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rpc:RPC_2791 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 3272080 4360603 RPE_2918 Rhodopseudomonas palustris BisA53 cold-shock DNA-binding domain-containing protein YP_781835.1 3271421 R 316055 CDS YP_781836.1 115524925 4360604 complement(3272286..3273047) 1 NC_008435.1 PFAM: Silent information regulator protein Sir2; KEGG: rpc:RPC_2792 silent information regulator protein Sir2; silent information regulator protein Sir2 3273047 4360604 RPE_2919 Rhodopseudomonas palustris BisA53 silent information regulator protein Sir2 YP_781836.1 3272286 R 316055 CDS YP_781837.1 115524926 4360605 3273353..3273802 1 NC_008435.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpc:RPC_2794 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3273802 4360605 RPE_2920 Rhodopseudomonas palustris BisA53 glyoxalase/bleomycin resistance protein/dioxygenase YP_781837.1 3273353 D 316055 CDS YP_781838.1 115524927 4360606 complement(3274013..3274273) 1 NC_008435.1 PFAM: type IV pilus assembly PilZ; KEGG: rpc:RPC_2795 hypothetical protein; hypothetical protein 3274273 4360606 RPE_2921 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781838.1 3274013 R 316055 CDS YP_781839.1 115524928 4360608 3274929..3275198 1 NC_008435.1 hypothetical protein 3275198 4360608 RPE_2922 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781839.1 3274929 D 316055 CDS YP_781840.1 115524929 4360609 complement(3275434..3275697) 1 NC_008435.1 KEGG: rpc:RPC_2801 hypothetical protein; hypothetical protein 3275697 4360609 RPE_2923 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781840.1 3275434 R 316055 CDS YP_781841.1 115524930 4360610 3276041..3276511 1 NC_008435.1 KEGG: rpc:RPC_2802 hypothetical protein; hypothetical protein 3276511 4360610 RPE_2924 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781841.1 3276041 D 316055 CDS YP_781842.1 115524931 4360611 complement(3276903..3277142) 1 NC_008435.1 KEGG: rpb:RPB_4353 hypothetical protein; hypothetical protein 3277142 4360611 RPE_2925 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781842.1 3276903 R 316055 CDS YP_781843.1 115524932 4360612 3277382..3277954 1 NC_008435.1 KEGG: rpc:RPC_2804 hypothetical protein; hypothetical protein 3277954 4360612 RPE_2926 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781843.1 3277382 D 316055 CDS YP_781844.1 115524933 4360613 complement(3277977..3278234) 1 NC_008435.1 KEGG: rpc:RPC_2805 hypothetical protein; hypothetical protein 3278234 4360613 RPE_2927 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781844.1 3277977 R 316055 CDS YP_781845.1 115524934 4360614 complement(3278471..3279556) 1 NC_008435.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; KEGG: rpc:RPC_2807 protein of unknown function DUF160; hypothetical protein 3279556 4360614 RPE_2928 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781845.1 3278471 R 316055 CDS YP_781846.1 115524935 4360615 complement(3279553..3280605) 1 NC_008435.1 PFAM: tRNA synthetase, class II (D, K and N); KEGG: rpc:RPC_2808 lysine--tRNA ligase; tRNA synthetase 3280605 4360615 RPE_2929 Rhodopseudomonas palustris BisA53 tRNA synthetase YP_781846.1 3279553 R 316055 CDS YP_781847.1 115524936 4360616 3280744..3281310 1 NC_008435.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 3281310 4360616 RPE_2930 Rhodopseudomonas palustris BisA53 elongation factor P YP_781847.1 3280744 D 316055 CDS YP_781848.1 115524937 4360617 3281342..3283060 1 NC_008435.1 PFAM: peptidase M23B; KEGG: rpc:RPC_2810 peptidase M23B; peptidase M23B 3283060 4360617 RPE_2931 Rhodopseudomonas palustris BisA53 peptidase M23B YP_781848.1 3281342 D 316055 CDS YP_781849.1 115524938 4360618 3283119..3284330 1 NC_008435.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_2811 lytic murein transglycosylase; lytic murein transglycosylase 3284330 4360618 RPE_2932 Rhodopseudomonas palustris BisA53 lytic murein transglycosylase YP_781849.1 3283119 D 316055 CDS YP_781850.1 115524939 4360619 3284337..3285437 1 NC_008435.1 KEGG: rpc:RPC_2812 membrane protein; hypothetical protein 3285437 4360619 RPE_2933 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781850.1 3284337 D 316055 CDS YP_781851.1 115524940 4360620 complement(3285434..3287275) 1 NC_008435.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: rpc:RPC_2813 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 3287275 4360620 RPE_2934 Rhodopseudomonas palustris BisA53 single-stranded-DNA-specific exonuclease RecJ YP_781851.1 3285434 R 316055 CDS YP_781852.1 115524941 4360621 complement(3287392..3288120) 1 NC_008435.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bja:blr4364 putative haloacid dehalogenase; haloacid dehalogenase 3288120 4360621 RPE_2935 Rhodopseudomonas palustris BisA53 haloacid dehalogenase YP_781852.1 3287392 R 316055 CDS YP_781853.1 115524942 4360622 complement(3288155..3289153) 1 NC_008435.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 3289153 glpX 4360622 glpX Rhodopseudomonas palustris BisA53 fructose 1,6-bisphosphatase II YP_781853.1 3288155 R 316055 CDS YP_781854.1 115524943 4360623 complement(3289214..3290533) 1 NC_008435.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 3290533 4360623 RPE_2937 Rhodopseudomonas palustris BisA53 homoserine dehydrogenase YP_781854.1 3289214 R 316055 CDS YP_781855.1 115524944 4360624 complement(3290635..3291855) 1 NC_008435.1 PFAM: aminotransferase, class I and II; KEGG: rpc:RPC_2817 aminotransferase, class I and II; aminotransferase 3291855 4360624 RPE_2938 Rhodopseudomonas palustris BisA53 aminotransferase YP_781855.1 3290635 R 316055 CDS YP_781856.1 115524945 4360625 complement(3292038..3292451) 1 NC_008435.1 KEGG: rpc:RPC_2818 hypothetical protein; hypothetical protein 3292451 4360625 RPE_2939 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781856.1 3292038 R 316055 CDS YP_781857.1 115524946 4360626 3292637..3294439 1 NC_008435.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: rpc:RPC_2819 poly(R)-hydroxyalkanoic acid synthase, class I; Poly(R)-hydroxyalkanoic acid synthase, class I 3294439 4360626 RPE_2940 Rhodopseudomonas palustris BisA53 Poly(R)-hydroxyalkanoic acid synthase, class I YP_781857.1 3292637 D 316055 CDS YP_781858.1 115524947 4360627 3294719..3297127 1 NC_008435.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; KEGG: bja:bll5864 hypothetical protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3297127 4360627 RPE_2941 Rhodopseudomonas palustris BisA53 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_781858.1 3294719 D 316055 CDS YP_781859.1 115524948 4360628 complement(3297147..3297509) 1 NC_008435.1 KEGG: rpb:RPB_2970 hypothetical protein; hypothetical protein 3297509 4360628 RPE_2942 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781859.1 3297147 R 316055 CDS YP_781860.1 115524949 4360629 complement(3297647..3298255) 1 NC_008435.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpa:RPA2492 hypothetical protein; type 12 methyltransferase 3298255 4360629 RPE_2943 Rhodopseudomonas palustris BisA53 type 12 methyltransferase YP_781860.1 3297647 R 316055 CDS YP_781861.1 115524950 4360630 complement(3298266..3299261) 1 NC_008435.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 3299261 4360630 RPE_2944 Rhodopseudomonas palustris BisA53 N-acetyl-gamma-glutamyl-phosphate reductase YP_781861.1 3298266 R 316055 CDS YP_781862.1 115524951 4360631 complement(3299347..3299877) 1 NC_008435.1 KEGG: rpc:RPC_2826 hypothetical protein; hypothetical protein 3299877 4360631 RPE_2945 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781862.1 3299347 R 316055 CDS YP_781863.1 115524952 4360632 3300162..3302219 1 NC_008435.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 3302219 4360632 RPE_2946 Rhodopseudomonas palustris BisA53 DNA topoisomerase IV subunit B YP_781863.1 3300162 D 316055 CDS YP_781864.1 115524953 4360633 complement(3302267..3302857) 1 NC_008435.1 PFAM: electron transport protein SCO1/SenC; KEGG: ccr:CC3503 SCO1/2 family protein; electron transport protein SCO1/SenC 3302857 4360633 RPE_2947 Rhodopseudomonas palustris BisA53 electron transport protein SCO1/SenC YP_781864.1 3302267 R 316055 CDS YP_781865.1 115524954 4360634 complement(3302950..3303486) 1 NC_008435.1 PFAM: protein of unknown function DUF461; KEGG: rpb:RPB_2594 protein of unknown function DUF461; hypothetical protein 3303486 4360634 RPE_2948 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781865.1 3302950 R 316055 CDS YP_781866.1 115524955 4360635 complement(3303486..3304025) 1 NC_008435.1 KEGG: bmb:BruAb2_0820 hypothetical membrane antigen; membrane antigen 3304025 4360635 RPE_2949 Rhodopseudomonas palustris BisA53 membrane antigen YP_781866.1 3303486 R 316055 CDS YP_781867.1 115524956 4360636 3304371..3304535 1 NC_008435.1 KEGG: nha:Nham_2317 DNA topoisomerase IV, B subunit; DNA topoisomerase IV subunit B 3304535 4360636 RPE_2950 Rhodopseudomonas palustris BisA53 DNA topoisomerase IV subunit B YP_781867.1 3304371 D 316055 CDS YP_781868.1 115524957 4360637 3304560..3306434 1 NC_008435.1 KEGG: nha:Nham_2318 hypothetical protein; hypothetical protein 3306434 4360637 RPE_2951 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781868.1 3304560 D 316055 CDS YP_781869.1 115524958 4360638 complement(3306431..3306628) 1 NC_008435.1 KEGG: rpc:RPC_2829 plasmid maintenance system antidote protein, XRE family; XRE family plasmid maintenance system antidote protein 3306628 4360638 RPE_2952 Rhodopseudomonas palustris BisA53 XRE family plasmid maintenance system antidote protein YP_781869.1 3306431 R 316055 CDS YP_781870.1 115524959 4360639 3306755..3307219 1 NC_008435.1 KEGG: rpc:RPC_2832 hypothetical protein; hypothetical protein 3307219 4360639 RPE_2953 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781870.1 3306755 D 316055 CDS YP_781871.1 115524960 4360640 3307312..3307500 1 NC_008435.1 KEGG: rpc:RPC_2831 hypothetical protein; hypothetical protein 3307500 4360640 RPE_2954 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781871.1 3307312 D 316055 CDS YP_781872.1 115524961 4360641 3307509..3308960 1 NC_008435.1 KEGG: rru:Rru_A0400 hypothetical protein; hypothetical protein 3308960 4360641 RPE_2955 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781872.1 3307509 D 316055 CDS YP_781873.1 115524962 4360642 complement(3308984..3310468) 1 NC_008435.1 PFAM: peptidase C14, caspase catalytic subunit p20; KEGG: rpa:RPA2480 hypothetical protein; peptidase C14, caspase catalytic subunit p20 3310468 4360642 RPE_2956 Rhodopseudomonas palustris BisA53 peptidase C14, caspase catalytic subunit p20 YP_781873.1 3308984 R 316055 CDS YP_781874.1 115524963 4360643 complement(3310566..3312764) 1 NC_008435.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpa:RPA1816 putative outer membrane receptor for iron transport; TonB-dependent receptor 3312764 4360643 RPE_2957 Rhodopseudomonas palustris BisA53 TonB-dependent receptor YP_781874.1 3310566 R 316055 CDS YP_781875.1 115524964 4360644 complement(3312816..3313199) 1 NC_008435.1 KEGG: rpb:RPB_3553 hypothetical protein; hypothetical protein 3313199 4360644 RPE_2958 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781875.1 3312816 R 316055 CDS YP_781876.1 115524965 4360645 3313634..3315187 1 NC_008435.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpc:RPC_2833 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 3315187 4360645 RPE_2959 Rhodopseudomonas palustris BisA53 DEAD/DEAH box helicase YP_781876.1 3313634 D 316055 CDS YP_781877.1 115524966 4360646 3315326..3316393 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_2834 diguanylate cyclase (GGDEF domain); diguanylate cyclase 3316393 4360646 RPE_2960 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_781877.1 3315326 D 316055 CDS YP_781878.1 115524967 4360647 complement(3316597..3317931) 1 NC_008435.1 PFAM: transposase, IS4 family protein; KEGG: sth:STH2086 transposase; transposase, IS4 family protein 3317931 4360647 RPE_2961 Rhodopseudomonas palustris BisA53 transposase, IS4 family protein YP_781878.1 3316597 R 316055 CDS YP_781879.1 115524968 4360648 complement(3318197..3318598) 1 NC_008435.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: nwi:Nwi_1659 HesB/YadR/YfhF; iron-sulfur cluster assembly accessory protein 3318598 4360648 RPE_2962 Rhodopseudomonas palustris BisA53 iron-sulfur cluster assembly accessory protein YP_781879.1 3318197 R 316055 CDS YP_781880.1 115524969 4360649 complement(3318668..3319036) 1 NC_008435.1 PFAM: protein of unknown function DUF59; KEGG: rpc:RPC_2836 protein of unknown function DUF59; hypothetical protein 3319036 4360649 RPE_2963 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781880.1 3318668 R 316055 CDS YP_781881.1 115524970 4360650 complement(3319033..3320280) 1 NC_008435.1 TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rpc:RPC_2837 cysteine desulfurases, SufS subfamily; SufS subfamily cysteine desulfurase 3320280 4360650 RPE_2964 Rhodopseudomonas palustris BisA53 SufS subfamily cysteine desulfurase YP_781881.1 3319033 R 316055 CDS YP_781882.1 115524971 4360651 complement(3320277..3321596) 1 NC_008435.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: rpc:RPC_2838 FeS assembly protein SufD; FeS assembly protein SufD 3321596 4360651 RPE_2965 Rhodopseudomonas palustris BisA53 FeS assembly protein SufD YP_781882.1 3320277 R 316055 CDS YP_781883.1 115524972 4360652 complement(3321615..3322370) 1 NC_008435.1 KEGG: rpc:RPC_2839 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 3322370 4360652 RPE_2966 Rhodopseudomonas palustris BisA53 FeS assembly ATPase SufC YP_781883.1 3321615 R 316055 CDS YP_781884.1 115524973 4360653 complement(3322541..3322759) 1 NC_008435.1 KEGG: rpb:RPB_2993 hypothetical protein; hypothetical protein 3322759 4360653 RPE_2967 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781884.1 3322541 R 316055 CDS YP_781885.1 115524974 4360654 complement(3322759..3324285) 1 NC_008435.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 3324285 4360654 RPE_2968 Rhodopseudomonas palustris BisA53 cysteine desulfurase activator complex subunit SufB YP_781885.1 3322759 R 316055 CDS YP_781886.1 115524975 4360655 complement(3324360..3325532) 1 NC_008435.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rpc:RPC_2842 aminotransferase, class V; class V aminotransferase 3325532 4360655 RPE_2969 Rhodopseudomonas palustris BisA53 class V aminotransferase YP_781886.1 3324360 R 316055 CDS YP_781887.1 115524976 4360656 3325795..3326442 1 NC_008435.1 KEGG: rpc:RPC_2843 hypothetical protein; hypothetical protein 3326442 4360656 RPE_2970 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781887.1 3325795 D 316055 CDS YP_781888.1 115524977 4360657 complement(3326464..3327567) 1 NC_008435.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 3327567 anmK 4360657 anmK Rhodopseudomonas palustris BisA53 anhydro-N-acetylmuramic acid kinase YP_781888.1 3326464 R 316055 CDS YP_781889.1 115524978 4360658 3327736..3328992 1 NC_008435.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 3328992 4360658 RPE_2972 Rhodopseudomonas palustris BisA53 tyrosyl-tRNA synthetase YP_781889.1 3327736 D 316055 CDS YP_781890.1 115524979 4360659 complement(3329134..3332877) 1 NC_008435.1 KEGG: rpc:RPC_2847 hypothetical protein; hypothetical protein 3332877 4360659 RPE_2973 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781890.1 3329134 R 316055 CDS YP_781891.1 115524980 4360660 3333074..3333784 1 NC_008435.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpb:RPB_3002 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; redoxin domain-containing protein 3333784 4360660 RPE_2974 Rhodopseudomonas palustris BisA53 redoxin domain-containing protein YP_781891.1 3333074 D 316055 CDS YP_781892.1 115524981 4360661 3333884..3335251 1 NC_008435.1 PFAM: peptidase M23B; KEGG: rpc:RPC_2849 peptidase M23B; peptidase M23B 3335251 4360661 RPE_2975 Rhodopseudomonas palustris BisA53 peptidase M23B YP_781892.1 3333884 D 316055 CDS YP_781893.1 115524982 4360662 complement(3335424..3336392) 1 NC_008435.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: rpd:RPD_2445 peptide chain release factor 2; peptide chain release factor 2 3336392 4360662 RPE_2976 Rhodopseudomonas palustris BisA53 peptide chain release factor 2 YP_781893.1 3335424 R 316055 CDS YP_781894.1 115524983 4360663 complement(3336664..3339156) 1 NC_008435.1 KEGG: rpc:RPC_2852 penicillin-binding protein 1A; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; 1A family penicillin-binding protein 3339156 4360663 RPE_2977 Rhodopseudomonas palustris BisA53 1A family penicillin-binding protein YP_781894.1 3336664 R 316055 CDS YP_781895.1 115524984 4360664 complement(3339327..3340613) 1 NC_008435.1 PFAM: cell wall hydrolase/autolysin; KEGG: rpc:RPC_2853 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 3340613 4360664 RPE_2978 Rhodopseudomonas palustris BisA53 N-acetylmuramoyl-L-alanine amidase YP_781895.1 3339327 R 316055 CDS YP_781896.1 115524985 4360665 3341294..3344344 1 NC_008435.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: rpc:RPC_2854 ribonuclease, Rne/Rng family; ribonuclease 3344344 4360665 RPE_2979 Rhodopseudomonas palustris BisA53 ribonuclease YP_781896.1 3341294 D 316055 CDS YP_781897.1 115524986 4360666 complement(3344451..3345653) 1 NC_008435.1 PFAM: aminotransferase, class I and II; Allinase-like; KEGG: rpc:RPC_2860 aminotransferase, class I and II; class I and II aminotransferase 3345653 4360666 RPE_2980 Rhodopseudomonas palustris BisA53 class I and II aminotransferase YP_781897.1 3344451 R 316055 CDS YP_781898.1 115524987 4360667 3345765..3347177 1 NC_008435.1 PFAM: peptidase M48, Ste24p; KEGG: rpc:RPC_2861 peptidase M48, Ste24p; peptidase M48, Ste24p 3347177 4360667 RPE_2981 Rhodopseudomonas palustris BisA53 peptidase M48, Ste24p YP_781898.1 3345765 D 316055 CDS YP_781899.1 115524988 4360668 complement(3347190..3347981) 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: atc:AGR_C_2897 hypothetical protein; alpha/beta hydrolase fold protein 3347981 4360668 RPE_2982 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_781899.1 3347190 R 316055 CDS YP_781900.1 115524989 4360669 3348240..3349007 1 NC_008435.1 PFAM: DSBA oxidoreductase; KEGG: rpc:RPC_2862 DsbA oxidoreductase; DSBA oxidoreductase 3349007 4360669 RPE_2983 Rhodopseudomonas palustris BisA53 DSBA oxidoreductase YP_781900.1 3348240 D 316055 CDS YP_781901.1 115524990 4360670 3349139..3349396 1 NC_008435.1 hypothetical protein 3349396 4360670 RPE_2984 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781901.1 3349139 D 316055 CDS YP_781902.1 115524991 4360671 3349611..3350297 1 NC_008435.1 PFAM: protein of unknown function DUF1236; KEGG: rpc:RPC_2866 protein of unknown function DUF1236; hypothetical protein 3350297 4360671 RPE_2985 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781902.1 3349611 D 316055 CDS YP_781903.1 115524992 4360672 3350741..3351196 1 NC_008435.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3351196 4360672 RPE_2986 Rhodopseudomonas palustris BisA53 3-dehydroquinate dehydratase YP_781903.1 3350741 D 316055 CDS YP_781904.1 115524993 4360673 3351232..3351714 1 NC_008435.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rpc:RPC_2868 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 3351714 4360673 RPE_2987 Rhodopseudomonas palustris BisA53 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_781904.1 3351232 D 316055 CDS YP_781905.1 115524994 4360674 3351837..3353192 1 NC_008435.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 3353192 4360674 RPE_2988 Rhodopseudomonas palustris BisA53 acetyl-CoA carboxylase biotin carboxylase subunit YP_781905.1 3351837 D 316055 CDS YP_781906.1 115524995 4360675 3353314..3354843 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE3 domain protein; KEGG: rpc:RPC_2870 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 3354843 4360675 RPE_2989 Rhodopseudomonas palustris BisA53 multi-sensor signal transduction histidine kinase YP_781906.1 3353314 D 316055 CDS YP_781907.1 115524996 4360676 3354840..3355280 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_2871 response regulator receiver domain protein (CheY-like); response regulator receiver protein 3355280 4360676 RPE_2990 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_781907.1 3354840 D 316055 CDS YP_781908.1 115524997 4360677 3355277..3356383 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: rpc:RPC_2872 signal transduction histidine kinase; signal transduction histidine kinase 3356383 4360677 RPE_2991 Rhodopseudomonas palustris BisA53 signal transduction histidine kinase YP_781908.1 3355277 D 316055 CDS YP_781909.1 115524998 4360678 3356417..3357190 1 NC_008435.1 KEGG: rpd:RPD_2427 hypothetical protein; hypothetical protein 3357190 4360678 RPE_2992 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781909.1 3356417 D 316055 CDS YP_781910.1 115524999 4360679 complement(3357171..3358991) 1 NC_008435.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpc:RPC_2874 radical SAM; radical SAM domain-containing protein 3358991 4360679 RPE_2993 Rhodopseudomonas palustris BisA53 radical SAM domain-containing protein YP_781910.1 3357171 R 316055 CDS YP_781911.1 115525000 4360680 3359139..3359828 1 NC_008435.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 3359828 aat 4360680 aat Rhodopseudomonas palustris BisA53 leucyl/phenylalanyl-tRNA--protein transferase YP_781911.1 3359139 D 316055 CDS YP_781912.1 115525001 4360681 complement(3359842..3360768) 1 NC_008435.1 KEGG: rpc:RPC_2883 hypothetical protein; hypothetical protein 3360768 4360681 RPE_2995 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781912.1 3359842 R 316055 CDS YP_781913.1 115525002 4360682 3360990..3361937 1 NC_008435.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: rpd:RPD_2420 alpha/beta hydrolase fold-3; alpha/beta hydrolase domain-containing protein 3361937 4360682 RPE_2996 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase domain-containing protein YP_781913.1 3360990 D 316055 CDS YP_781914.1 115525003 4360683 complement(3362110..3362382) 1 NC_008435.1 KEGG: rpc:RPC_2927 hypothetical protein; hypothetical protein 3362382 4360683 RPE_2997 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781914.1 3362110 R 316055 CDS YP_781915.1 115525004 4360684 complement(3362554..3363213) 1 NC_008435.1 KEGG: bja:blr4700 putative outer-membrane immunogenic protein precursor; putative outer-membrane immunogenic protein 3363213 4360684 RPE_2998 Rhodopseudomonas palustris BisA53 putative outer-membrane immunogenic protein YP_781915.1 3362554 R 316055 CDS YP_781916.1 115525005 4360685 3363499..3364107 1 NC_008435.1 PFAM: protein of unknown function DUF1211; KEGG: mhu:Mhun_0814 protein of unknown function DUF1211; hypothetical protein 3364107 4360685 RPE_2999 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781916.1 3363499 D 316055 CDS YP_781917.1 115525006 4360686 complement(3364132..3366468) 1 NC_008435.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: rpb:RPB_3153 adenylate/guanylate cyclase; adenylate/guanylate cyclase 3366468 4360686 RPE_3000 Rhodopseudomonas palustris BisA53 adenylate/guanylate cyclase YP_781917.1 3364132 R 316055 CDS YP_781918.1 115525007 4360687 3366766..3367194 1 NC_008435.1 KEGG: rpb:RPB_3154 hypothetical protein; hypothetical protein 3367194 4360687 RPE_3001 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781918.1 3366766 D 316055 CDS YP_781919.1 115525008 4360688 complement(3367201..3368898) 1 NC_008435.1 KEGG: rpb:RPB_3155 hypothetical protein; hypothetical protein 3368898 4360688 RPE_3002 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781919.1 3367201 R 316055 CDS YP_781920.1 115525009 4360689 complement(3368910..3370274) 1 NC_008435.1 KEGG: rpb:RPB_3156 hypothetical protein; hypothetical protein 3370274 4360689 RPE_3003 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781920.1 3368910 R 316055 CDS YP_781921.1 115525010 4360690 complement(3370575..3371393) 1 NC_008435.1 KEGG: rpc:RPC_2938 hypothetical protein; hypothetical protein 3371393 4360690 RPE_3004 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781921.1 3370575 R 316055 CDS YP_781922.1 115525011 4360691 complement(3371684..3371902) 1 NC_008435.1 KEGG: rpd:RPD_2665 hypothetical protein; hypothetical protein 3371902 4360691 RPE_3005 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781922.1 3371684 R 316055 CDS YP_781923.1 115525012 4360692 complement(3371899..3372138) 1 NC_008435.1 KEGG: rpc:RPC_2654 hypothetical protein; hypothetical protein 3372138 4360692 RPE_3006 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781923.1 3371899 R 316055 CDS YP_781924.1 115525013 4360693 complement(3372370..3372885) 1 NC_008435.1 PFAM: regulatory protein, MarR; KEGG: rpb:RPB_2626 transcriptional regulator, MarR family; MarR family transcriptional regulator 3372885 4360693 RPE_3007 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_781924.1 3372370 R 316055 CDS YP_781925.1 115525014 4360694 3373380..3373922 1 NC_008435.1 KEGG: bja:blr5037 delta_aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase 3373922 4360694 RPE_3008 Rhodopseudomonas palustris BisA53 delta-aminolevulinic acid dehydratase YP_781925.1 3373380 D 316055 CDS YP_781926.1 115525015 4360695 3374091..3375149 1 NC_008435.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3375149 4360695 RPE_3009 Rhodopseudomonas palustris BisA53 delta-aminolevulinic acid dehydratase YP_781926.1 3374091 D 316055 CDS YP_781927.1 115525016 4360696 3375405..3375947 1 NC_008435.1 PFAM: RDD domain containing protein; KEGG: rpc:RPC_2650 RDD; RDD domain-containing protein 3375947 4360696 RPE_3010 Rhodopseudomonas palustris BisA53 RDD domain-containing protein YP_781927.1 3375405 D 316055 CDS YP_781928.1 115525017 4360697 3376019..3376795 1 NC_008435.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 3376795 4360697 RPE_3011 Rhodopseudomonas palustris BisA53 arginyl-tRNA-protein transferase YP_781928.1 3376019 D 316055 CDS YP_781929.1 115525018 4360698 complement(3376878..3377180) 1 NC_008435.1 PFAM: Transglycosylase-associated protein; KEGG: mlo:msr2497 hypothetical protein; transglycosylase-associated protein 3377180 4360698 RPE_3012 Rhodopseudomonas palustris BisA53 transglycosylase-associated protein YP_781929.1 3376878 R 316055 CDS YP_781930.1 115525019 4360699 complement(3377382..3378059) 1 NC_008435.1 PFAM: SOUL heme-binding protein; KEGG: ccr:CC2549 hypothetical protein; SOUL heme-binding protein 3378059 4360699 RPE_3013 Rhodopseudomonas palustris BisA53 SOUL heme-binding protein YP_781930.1 3377382 R 316055 CDS YP_781931.1 115525020 4360700 complement(3378196..3379395) 1 NC_008435.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: bja:bll6988 hypothetical protein; signal transduction histidine kinase 3379395 4360700 RPE_3014 Rhodopseudomonas palustris BisA53 signal transduction histidine kinase YP_781931.1 3378196 R 316055 CDS YP_781932.1 115525021 4360701 complement(3379550..3380926) 1 NC_008435.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: rpc:RPC_2648 NRAMP family Mn2+/Fe2+ transporters; manganese transport protein MntH 3380926 4360701 RPE_3015 Rhodopseudomonas palustris BisA53 manganese transport protein MntH YP_781932.1 3379550 R 316055 CDS YP_781933.1 115525022 4360702 3381177..3381356 1 NC_008435.1 KEGG: rpa:RPA2705 hypothetical protein; hypothetical protein 3381356 4360702 RPE_3016 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781933.1 3381177 D 316055 CDS YP_781934.1 115525023 4360703 complement(3381552..3383813) 1 NC_008435.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 3383813 4360703 RPE_3017 Rhodopseudomonas palustris BisA53 DNA topoisomerase IV subunit A YP_781934.1 3381552 R 316055 CDS YP_781935.1 115525024 4360704 complement(3383858..3384634) 1 NC_008435.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 3384634 recO 4360704 recO Rhodopseudomonas palustris BisA53 DNA repair protein RecO YP_781935.1 3383858 R 316055 CDS YP_781936.1 115525025 4360705 3384909..3386600 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpd:RPD_0337 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3386600 4360705 RPE_3019 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_781936.1 3384909 D 316055 CDS YP_781937.1 115525026 4360706 complement(3386726..3387106) 1 NC_008435.1 KEGG: rpc:RPC_2642 hypothetical protein; hypothetical protein 3387106 4360706 RPE_3020 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781937.1 3386726 R 316055 CDS YP_781938.1 115525027 4360707 complement(3387109..3388050) 1 NC_008435.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 3388050 era 4360707 era Rhodopseudomonas palustris BisA53 GTP-binding protein Era YP_781938.1 3387109 R 316055 CDS YP_781939.1 115525028 4360708 complement(3388043..3388849) 1 NC_008435.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: rpc:RPC_2640 ribonuclease III; ribonuclease III 3388849 4360708 RPE_3022 Rhodopseudomonas palustris BisA53 ribonuclease III YP_781939.1 3388043 R 316055 CDS YP_781940.1 115525029 4360709 complement(3388846..3389604) 1 NC_008435.1 KEGG: rpb:RPB_2611 peptidase S26A, signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; peptidase S26A, signal peptidase I 3389604 4360709 RPE_3023 Rhodopseudomonas palustris BisA53 peptidase S26A, signal peptidase I YP_781940.1 3388846 R 316055 CDS YP_781941.1 115525030 4360710 complement(3389861..3390280) 1 NC_008435.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 3390280 acpS 4360710 acpS Rhodopseudomonas palustris BisA53 4'-phosphopantetheinyl transferase YP_781941.1 3389861 R 316055 CDS YP_781942.1 115525031 4360711 complement(3390277..3391044) 1 NC_008435.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 3391044 4360711 RPE_3025 Rhodopseudomonas palustris BisA53 pyridoxine 5'-phosphate synthase YP_781942.1 3390277 R 316055 CDS YP_781943.1 115525032 4360712 complement(3391078..3393357) 1 NC_008435.1 KEGG: rpc:RPC_2635 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; (p)ppGpp synthetase I SpoT/RelA 3393357 4360712 RPE_3026 Rhodopseudomonas palustris BisA53 (p)ppGpp synthetase I SpoT/RelA YP_781943.1 3391078 R 316055 CDS YP_781944.1 115525033 4360713 complement(3393782..3394174) 1 NC_008435.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 3394174 4360713 RPE_3027 Rhodopseudomonas palustris BisA53 DNA-directed RNA polymerase subunit omega YP_781944.1 3393782 R 316055 CDS YP_781945.1 115525034 4360714 3394534..3395163 1 NC_008435.1 PFAM: protein of unknown function DUF88; KEGG: rpc:RPC_2633 protein of unknown function DUF88; hypothetical protein 3395163 4360714 RPE_3028 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781945.1 3394534 D 316055 CDS YP_781946.1 115525035 4360715 3395201..3395878 1 NC_008435.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: rpa:RPA2690 possible uracil-DNA glycosylase; uracil-DNA glycosylase superfamily protein 3395878 4360715 RPE_3029 Rhodopseudomonas palustris BisA53 uracil-DNA glycosylase superfamily protein YP_781946.1 3395201 D 316055 CDS YP_781947.1 115525036 4360716 complement(3396010..3396483) 1 NC_008435.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 3396483 smpB 4360716 smpB Rhodopseudomonas palustris BisA53 SsrA-binding protein YP_781947.1 3396010 R 316055 CDS YP_781948.1 115525037 4360717 complement(3396550..3396963) 1 NC_008435.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: bja:bll5071 mechanosensitive channel homolog; large conductance mechanosensitive channel protein 3396963 4360717 RPE_3031 Rhodopseudomonas palustris BisA53 large conductance mechanosensitive channel protein YP_781948.1 3396550 R 316055 CDS YP_781949.1 115525038 4360718 complement(3397013..3397903) 1 NC_008435.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 3397903 4360718 RPE_3032 Rhodopseudomonas palustris BisA53 dihydrodipicolinate synthase YP_781949.1 3397013 R 316055 CDS YP_781950.1 115525039 4360719 3398187..3398648 1 NC_008435.1 PFAM: protein of unknown function UPF0074; KEGG: rpc:RPC_2628 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 3398648 4360719 RPE_3033 Rhodopseudomonas palustris BisA53 BadM/Rrf2 family transcriptional regulator YP_781950.1 3398187 D 316055 CDS YP_781951.1 115525040 4360720 3398662..3399453 1 NC_008435.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_2627 UbiE/COQ5 methyltransferase; type 11 methyltransferase 3399453 4360720 RPE_3034 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_781951.1 3398662 D 316055 CDS YP_781952.1 115525041 4360721 complement(3399509..3399916) 1 NC_008435.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: rpc:RPC_2626 cupin 2, conserved barrel; cupin 3399916 4360721 RPE_3035 Rhodopseudomonas palustris BisA53 cupin YP_781952.1 3399509 R 316055 CDS YP_781953.1 115525042 4360722 complement(3399980..3400720) 1 NC_008435.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rpc:RPC_2625 dimethylmenaquinone methyltransferase; hypothetical protein 3400720 4360722 RPE_3036 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781953.1 3399980 R 316055 CDS YP_781954.1 115525043 4360723 3400924..3401658 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; PFAM: Allophanate hydrolase subunit 1; KEGG: rpc:RPC_2624 hypothetical protein; hypothetical protein 3401658 4360723 RPE_3037 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781954.1 3400924 D 316055 CDS YP_781955.1 115525044 4360724 3401655..3402659 1 NC_008435.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: rpc:RPC_2623 allophanate hydrolase subunit 2; allophanate hydrolase subunit 2 3402659 4360724 RPE_3038 Rhodopseudomonas palustris BisA53 allophanate hydrolase subunit 2 YP_781955.1 3401655 D 316055 CDS YP_781956.1 115525045 4360725 3402802..3403569 1 NC_008435.1 PFAM: LamB/YcsF family protein; KEGG: rpa:RPA2681 possible lactam utilization protein; LamB/YcsF family protein 3403569 4360725 RPE_3039 Rhodopseudomonas palustris BisA53 LamB/YcsF family protein YP_781956.1 3402802 D 316055 CDS YP_781957.1 115525046 4360726 3404141..3405466 1 NC_008435.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 3405466 rimO 4360726 rimO Rhodopseudomonas palustris BisA53 ribosomal protein S12 methylthiotransferase YP_781957.1 3404141 D 316055 CDS YP_781958.1 115525047 4360727 complement(3405572..3406459) 1 NC_008435.1 PFAM: protein of unknown function DUF344; KEGG: ana:alr2191 hypothetical protein; hypothetical protein 3406459 4360727 RPE_3041 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781958.1 3405572 R 316055 CDS YP_781959.1 115525048 4360728 3406932..3407888 1 NC_008435.1 PFAM: transposase, IS4 family protein; KEGG: atc:AGR_L_863gl hypothetical protein; transposase, IS4 family protein 3407888 4360728 RPE_3042 Rhodopseudomonas palustris BisA53 transposase, IS4 family protein YP_781959.1 3406932 D 316055 CDS YP_781960.1 115525049 4360729 complement(3408183..3408491) 1 NC_008435.1 hypothetical protein 3408491 4360729 RPE_3043 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781960.1 3408183 R 316055 CDS YP_781961.1 115525050 4360730 complement(3408683..3409450) 1 NC_008435.1 KEGG: bja:bll1305 hypothetical protein; hypothetical protein 3409450 4360730 RPE_3044 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781961.1 3408683 R 316055 CDS YP_781962.1 115525051 4360731 complement(3409883..3411505) 1 NC_008435.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: rpc:RPC_2944 peptide chain release factor 3; peptide chain release factor 3 3411505 4360731 RPE_3045 Rhodopseudomonas palustris BisA53 peptide chain release factor 3 YP_781962.1 3409883 R 316055 CDS YP_781963.1 115525052 4360732 3411724..3412038 1 NC_008435.1 PFAM: small multidrug resistance protein; KEGG: rpc:RPC_2945 small multidrug resistance protein; small multidrug resistance protein 3412038 4360732 RPE_3046 Rhodopseudomonas palustris BisA53 small multidrug resistance protein YP_781963.1 3411724 D 316055 CDS YP_781964.1 115525053 4360733 complement(3412098..3413102) 1 NC_008435.1 PFAM: phosphate transporter; KEGG: rpd:RPD_2335 phosphate transporter; phosphate transporter 3413102 4360733 RPE_3047 Rhodopseudomonas palustris BisA53 phosphate transporter YP_781964.1 3412098 R 316055 CDS YP_781965.1 115525054 4360734 complement(3413117..3413773) 1 NC_008435.1 PFAM: protein of unknown function DUF47; KEGG: rpc:RPC_2947 protein of unknown function DUF47; hypothetical protein 3413773 4360734 RPE_3048 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781965.1 3413117 R 316055 CDS YP_781966.1 115525055 4360735 3414357..3416231 1 NC_008435.1 KEGG: rpc:RPC_2948 hypothetical protein; hypothetical protein 3416231 4360735 RPE_3049 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781966.1 3414357 D 316055 CDS YP_781967.1 115525056 4360736 complement(3416818..3417267) 1 NC_008435.1 KEGG: rpc:RPC_2950 hypothetical protein; hypothetical protein 3417267 4360736 RPE_3050 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781967.1 3416818 R 316055 CDS YP_781968.1 115525057 4360737 complement(3417555..3418523) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_2332 inner-membrane translocator; inner-membrane translocator 3418523 4360737 RPE_3051 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_781968.1 3417555 R 316055 CDS YP_781969.1 115525058 4360738 complement(3418525..3419400) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpc:RPC_2952 inner-membrane translocator; inner-membrane translocator 3419400 4360738 RPE_3052 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_781969.1 3418525 R 316055 CDS YP_781970.1 115525059 4360739 complement(3419482..3420702) 1 NC_008435.1 KEGG: bja:blr4039 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 3420702 4360739 RPE_3053 Rhodopseudomonas palustris BisA53 ABC transporter substrate-binding protein YP_781970.1 3419482 R 316055 CDS YP_781971.1 115525060 4360740 complement(3420739..3421518) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_2954 ABC transporter related; ABC transporter-like protein 3421518 4360740 RPE_3054 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_781971.1 3420739 R 316055 CDS YP_781972.1 115525061 4360741 complement(3421511..3422266) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA2275 putative branched-chain amino acid transport system ATP-binding protein; ABC transporter-like protein 3422266 4360741 RPE_3055 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_781972.1 3421511 R 316055 CDS YP_781973.1 115525062 4360742 3422596..3423084 1 NC_008435.1 hypothetical protein 3423084 4360742 RPE_3056 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781973.1 3422596 D 316055 CDS YP_781974.1 115525063 4360743 3423201..3424712 1 NC_008435.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 3424712 4360743 RPE_3057 Rhodopseudomonas palustris BisA53 pyruvate kinase YP_781974.1 3423201 D 316055 CDS YP_781975.1 115525064 4360744 complement(3424678..3425025) 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; PFAM: arsenate reductase and related; KEGG: rpa:RPA2272 hypothetical protein; hypothetical protein 3425025 4360744 RPE_3058 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781975.1 3424678 R 316055 CDS YP_781976.1 115525065 4360745 complement(3425333..3426331) 1 NC_008435.1 hypothetical protein 3426331 4360745 RPE_3059 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781976.1 3425333 R 316055 CDS YP_781977.1 115525066 4360746 complement(3426423..3427097) 1 NC_008435.1 PFAM: PspA/IM30 family protein; KEGG: ret:RHE_CH03136 hypothetical protein; phage shock protein A, PspA 3427097 4360746 RPE_3060 Rhodopseudomonas palustris BisA53 phage shock protein A, PspA YP_781977.1 3426423 R 316055 CDS YP_781978.1 115525067 4360747 3427240..3427824 1 NC_008435.1 PFAM: LemA family protein; KEGG: bja:bll2494 lemA protein; LemA family protein 3427824 4360747 RPE_3061 Rhodopseudomonas palustris BisA53 LemA family protein YP_781978.1 3427240 D 316055 CDS YP_781979.1 115525068 4360748 3427849..3429822 1 NC_008435.1 PFAM: peptidase M48, Ste24p; KEGG: rpa:RPA4495 possible protease htpX homolog; peptidase M48, Ste24p 3429822 4360748 RPE_3062 Rhodopseudomonas palustris BisA53 peptidase M48, Ste24p YP_781979.1 3427849 D 316055 CDS YP_781980.1 115525069 4360749 3430040..3431842 1 NC_008435.1 KEGG: rpa:RPA2269 putative flavoprotein involved in K+ transport; putative potassium transport flavoprotein 3431842 4360749 RPE_3063 Rhodopseudomonas palustris BisA53 putative potassium transport flavoprotein YP_781980.1 3430040 D 316055 CDS YP_781981.1 115525070 4360750 complement(3431909..3432415) 1 NC_008435.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: rpa:RPA2070 hypothetical protein; hemerythrin HHE cation binding domain-containing protein 3432415 4360750 RPE_3064 Rhodopseudomonas palustris BisA53 hemerythrin HHE cation binding domain-containing protein YP_781981.1 3431909 R 316055 CDS YP_781982.1 115525071 4360751 complement(3432555..3433565) 1 NC_008435.1 KEGG: rpa:RPA2069 hypothetical protein; hypothetical protein 3433565 4360751 RPE_3065 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781982.1 3432555 R 316055 CDS YP_781983.1 115525072 4360752 complement(3433562..3433852) 1 NC_008435.1 KEGG: rpa:RPA2068 hypothetical protein; hypothetical protein 3433852 4360752 RPE_3066 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781983.1 3433562 R 316055 CDS YP_781984.1 115525073 4360753 complement(3434189..3435490) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpa:RPA4459 putative flavocytochrome c sulfide dehydrogenase, flavoprotein subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3435490 4360753 RPE_3067 Rhodopseudomonas palustris BisA53 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_781984.1 3434189 R 316055 CDS YP_781985.1 115525074 4360754 complement(3435520..3436779) 1 NC_008435.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpd:RPD_4248 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3436779 4360754 RPE_3068 Rhodopseudomonas palustris BisA53 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_781985.1 3435520 R 316055 CDS YP_781986.1 115525075 4360755 complement(3436799..3437170) 1 NC_008435.1 KEGG: rpb:RPB_4365 cytochrome subunit of sulfide dehydrogenase; hypothetical protein 3437170 4360755 RPE_3069 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781986.1 3436799 R 316055 CDS YP_781987.1 115525076 4360756 complement(3437331..3438413) 1 NC_008435.1 PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: rpd:RPD_4250 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 3438413 4360756 RPE_3070 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781987.1 3437331 R 316055 CDS YP_781988.1 115525077 4360757 complement(3438579..3439298) 1 NC_008435.1 PFAM: cytochrome c, class I; KEGG: rpa:RPA4463 possible cytochrome; cytochrome c, class I 3439298 4360757 RPE_3071 Rhodopseudomonas palustris BisA53 cytochrome c, class I YP_781988.1 3438579 R 316055 CDS YP_781989.1 115525078 4360758 complement(3439282..3440562) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: oxidoreductase, molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: rpd:RPD_4252 twin-arginine translocation pathway signal; molybdopterin binding oxidoreductase 3440562 4360758 RPE_3072 Rhodopseudomonas palustris BisA53 molybdopterin binding oxidoreductase YP_781989.1 3439282 R 316055 CDS YP_781990.1 115525079 4360759 complement(3440638..3442335) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: 5'-Nucleotidase domain protein; KEGG: rpb:RPB_4369 twin-arginine translocation pathway signal; 5'-nucleotidase domain-containing protein 3442335 4360759 RPE_3073 Rhodopseudomonas palustris BisA53 5'-nucleotidase domain-containing protein YP_781990.1 3440638 R 316055 CDS YP_781991.1 115525080 4360760 complement(3442419..3442751) 1 NC_008435.1 KEGG: rpd:RPD_4254 putative sulfur oxidation protein SoxZ; putative sulfur oxidation protein SoxZ 3442751 4360760 RPE_3074 Rhodopseudomonas palustris BisA53 putative sulfur oxidation protein SoxZ YP_781991.1 3442419 R 316055 CDS YP_781992.1 115525081 4360761 complement(3442799..3443263) 1 NC_008435.1 with SoxZ catalyzes the oxidation of sulfur compounds; sulfur oxidation protein SoxY 3443263 4360761 RPE_3075 Rhodopseudomonas palustris BisA53 sulfur oxidation protein SoxY YP_781992.1 3442799 R 316055 CDS YP_781993.1 115525082 4360762 3443432..3444253 1 NC_008435.1 KEGG: rpd:RPD_4256 hypothetical protein; hypothetical protein 3444253 4360762 RPE_3076 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781993.1 3443432 D 316055 CDS YP_781994.1 115525083 4360763 3444265..3444924 1 NC_008435.1 KEGG: rpd:RPD_4257 hypothetical protein; hypothetical protein 3444924 4360763 RPE_3077 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781994.1 3444265 D 316055 CDS YP_781995.1 115525084 4360764 3445035..3445532 1 NC_008435.1 PFAM: protein of unknown function DUF336; KEGG: rpd:RPD_4258 protein of unknown function DUF336; hypothetical protein 3445532 4360764 RPE_3078 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781995.1 3445035 D 316055 CDS YP_781996.1 115525085 4360765 complement(3445558..3446139) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_4375 twin-arginine translocation pathway signal; thioredoxin-like protein 3446139 4360765 RPE_3079 Rhodopseudomonas palustris BisA53 thioredoxin-like protein YP_781996.1 3445558 R 316055 CDS YP_781997.1 115525086 4360766 complement(3446167..3446910) 1 NC_008435.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: rpd:RPD_4260 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein, transmembrane region 3446910 4360766 RPE_3080 Rhodopseudomonas palustris BisA53 cytochrome c biogenesis protein, transmembrane region YP_781997.1 3446167 R 316055 CDS YP_781998.1 115525087 4360767 3446951..3447355 1 NC_008435.1 KEGG: rpd:RPD_4261 hypothetical protein; hypothetical protein 3447355 4360767 RPE_3081 Rhodopseudomonas palustris BisA53 hypothetical protein YP_781998.1 3446951 D 316055 CDS YP_781999.1 115525088 4360768 3447370..3447747 1 NC_008435.1 PFAM: regulatory protein, ArsR; KEGG: rpd:RPD_4262 regulatory protein, ArsR; ArsR family transcriptional regulator 3447747 4360768 RPE_3082 Rhodopseudomonas palustris BisA53 ArsR family transcriptional regulator YP_781999.1 3447370 D 316055 CDS YP_782000.1 115525089 4360769 3447816..3448922 1 NC_008435.1 PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: rpb:RPB_4379 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 3448922 4360769 RPE_3083 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782000.1 3447816 D 316055 CDS YP_782001.1 115525090 4360770 3448978..3450495 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpb:RPB_4311 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 3450495 4360770 RPE_3084 Rhodopseudomonas palustris BisA53 4Fe-4S ferredoxin YP_782001.1 3448978 D 316055 CDS YP_782002.1 115525091 4360771 complement(3450607..3451596) 1 NC_008435.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: bbr:BB4314 putative inner membrane transport protein; C4-dicarboxylate transporter/malic acid transport protein 3451596 4360771 RPE_3085 Rhodopseudomonas palustris BisA53 C4-dicarboxylate transporter/malic acid transport protein YP_782002.1 3450607 R 316055 CDS YP_782003.1 115525092 4360772 3451974..3452414 1 NC_008435.1 PFAM: cytochrome c, class II; KEGG: rpa:RPA2314 cytochrome c556; cytochrome c, class II 3452414 4360772 RPE_3086 Rhodopseudomonas palustris BisA53 cytochrome c, class II YP_782003.1 3451974 D 316055 CDS YP_782004.1 115525093 4360773 3452418..3453092 1 NC_008435.1 PFAM: cytochrome B561; KEGG: rpa:RPA2315 putative nickel-dependent hydrogenase, b-type cytochrome subunit; cytochrome B561 3453092 4360773 RPE_3087 Rhodopseudomonas palustris BisA53 cytochrome B561 YP_782004.1 3452418 D 316055 CDS YP_782005.1 115525094 4360774 3453110..3453397 1 NC_008435.1 hypothetical protein 3453397 4360774 RPE_3088 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782005.1 3453110 D 316055 CDS YP_782006.1 115525095 4360775 complement(3453418..3453753) 1 NC_008435.1 KEGG: rpb:RPB_3172 hypothetical protein; hypothetical protein 3453753 4360775 RPE_3089 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782006.1 3453418 R 316055 CDS YP_782007.1 115525096 4360776 complement(3453807..3454307) 1 NC_008435.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 3454307 4360776 RPE_3090 Rhodopseudomonas palustris BisA53 flavodoxin FldA YP_782007.1 3453807 R 316055 CDS YP_782008.1 115525097 4360777 3454609..3455094 1 NC_008435.1 PFAM: Ferritin, Dps family protein; KEGG: rpa:RPA2755 possible DNA-binding stress protein; Ferritin, Dps family protein 3455094 4360777 RPE_3091 Rhodopseudomonas palustris BisA53 Ferritin, Dps family protein YP_782008.1 3454609 D 316055 CDS YP_782009.1 115525098 4360778 3455343..3455603 1 NC_008435.1 KEGG: rpd:RPD_3790 hypothetical protein; hypothetical protein 3455603 4360778 RPE_3092 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782009.1 3455343 D 316055 CDS YP_782010.1 115525099 4360779 complement(3455674..3456558) 1 NC_008435.1 KEGG: rpc:RPC_0426 hypothetical protein; hypothetical protein 3456558 4360779 RPE_3093 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782010.1 3455674 R 316055 CDS YP_782011.1 115525100 4360780 3456747..3458993 1 NC_008435.1 PFAM: FMN-binding domain protein; KEGG: rpb:RPB_3141 FMN-binding; FMN-binding domain-containing protein 3458993 4360780 RPE_3094 Rhodopseudomonas palustris BisA53 FMN-binding domain-containing protein YP_782011.1 3456747 D 316055 CDS YP_782012.1 115525101 4360781 3459011..3460957 1 NC_008435.1 reduces nitrous oxide to nitrogen; nitrous-oxide reductase 3460957 4360781 RPE_3095 Rhodopseudomonas palustris BisA53 nitrous-oxide reductase YP_782012.1 3459011 D 316055 CDS YP_782013.1 115525102 4360782 3460957..3462327 1 NC_008435.1 PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: rpb:RPB_3143 periplasmic copper-binding; periplasmic copper-binding protein 3462327 4360782 RPE_3096 Rhodopseudomonas palustris BisA53 periplasmic copper-binding protein YP_782013.1 3460957 D 316055 CDS YP_782014.1 115525103 4360783 3462324..3463229 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_3144 ABC transporter related; ABC transporter-like protein 3463229 4360783 RPE_3097 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782014.1 3462324 D 316055 CDS YP_782015.1 115525104 4360784 3463226..3464053 1 NC_008435.1 KEGG: rpb:RPB_3145 nitrous oxide metabolic protein; nitrous oxide metabolic protein 3464053 4360784 RPE_3098 Rhodopseudomonas palustris BisA53 nitrous oxide metabolic protein YP_782015.1 3463226 D 316055 CDS YP_782016.1 115525105 4360785 3464050..3464598 1 NC_008435.1 PFAM: NosL family protein; KEGG: rpc:RPC_0432 NosL; NosL family protein 3464598 4360785 RPE_3099 Rhodopseudomonas palustris BisA53 NosL family protein YP_782016.1 3464050 D 316055 CDS YP_782017.1 115525106 4360786 3464612..3465607 1 NC_008435.1 PFAM: ApbE family lipoprotein; KEGG: rpb:RPB_3147 twin-arginine translocation pathway signal; ApbE family lipoprotein 3465607 4360786 RPE_3100 Rhodopseudomonas palustris BisA53 ApbE family lipoprotein YP_782017.1 3464612 D 316055 CDS YP_782018.1 115525107 4360787 3466070..3468352 1 NC_008435.1 KEGG: rpc:RPC_2980 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; formate acetyltransferase 3468352 4360787 RPE_3101 Rhodopseudomonas palustris BisA53 formate acetyltransferase YP_782018.1 3466070 D 316055 CDS YP_782019.1 115525108 4360788 3468339..3469148 1 NC_008435.1 TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein; KEGG: rpc:RPC_1081 pyruvate formate-lyase activating; pyruvate formate-lyase activating enzyme 3469148 4360788 RPE_3102 Rhodopseudomonas palustris BisA53 pyruvate formate-lyase activating enzyme YP_782019.1 3468339 D 316055 CDS YP_782020.1 115525109 4360789 complement(3469216..3469791) 1 NC_008435.1 TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; KEGG: bja:blr1228 guanylate kinase; phosphonate metabolism 1,5-bisphosphokinase PhnN 3469791 4360789 RPE_3103 Rhodopseudomonas palustris BisA53 phosphonate metabolism 1,5-bisphosphokinase PhnN YP_782020.1 3469216 R 316055 CDS YP_782021.1 115525110 4360790 complement(3469788..3470945) 1 NC_008435.1 TIGRFAM: phosphonate metabolism protein PhnM; PFAM: Amidohydrolase 3; KEGG: rpb:RPB_4095 phosphonate metabolism PhnM; phosphonate metabolism protein PhnM 3470945 4360790 RPE_3104 Rhodopseudomonas palustris BisA53 phosphonate metabolism protein PhnM YP_782021.1 3469788 R 316055 CDS YP_782022.1 115525111 4360791 complement(3470976..3471686) 1 NC_008435.1 KEGG: rpb:RPB_4094 phosphonate C-P lyase system, PhnL; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system, PhnL 3471686 4360791 RPE_3105 Rhodopseudomonas palustris BisA53 phosphonate C-P lyase system, PhnL YP_782022.1 3470976 R 316055 CDS YP_782023.1 115525112 4360792 complement(3471683..3472483) 1 NC_008435.1 KEGG: rpd:RPD_3829 phosphonate C-P lyase system, PhnK; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK 3472483 phnK 4360792 phnK Rhodopseudomonas palustris BisA53 phosphonate C-P lyase system protein PhnK YP_782023.1 3471683 R 316055 CDS YP_782024.1 115525113 4360793 complement(3472476..3473357) 1 NC_008435.1 PFAM: phosphonate metabolism PhnJ; KEGG: rpb:RPB_4092 phosphonate metabolism PhnJ; phosphonate metabolism PhnJ 3473357 4360793 RPE_3107 Rhodopseudomonas palustris BisA53 phosphonate metabolism PhnJ YP_782024.1 3472476 R 316055 CDS YP_782025.1 115525114 4360794 complement(3473354..3474460) 1 NC_008435.1 PFAM: phosphonate metabolism; KEGG: rpd:RPD_3827 phosphonate metabolism; phosphonate metabolism protein 3474460 4360794 RPE_3108 Rhodopseudomonas palustris BisA53 phosphonate metabolism protein YP_782025.1 3473354 R 316055 CDS YP_782026.1 115525115 4360795 complement(3474460..3475071) 1 NC_008435.1 PFAM: phosphonate metabolism; KEGG: rpb:RPB_4090 phosphonate metabolism; carbon-phosphorus lyase complex subunit 3475071 phnH 4360795 phnH Rhodopseudomonas palustris BisA53 carbon-phosphorus lyase complex subunit YP_782026.1 3474460 R 316055 CDS YP_782027.1 115525116 4360796 complement(3475074..3475532) 1 NC_008435.1 PFAM: phosphonate metabolism PhnG; KEGG: rpd:RPD_3825 phosphonate metabolism PhnG; phosphonate metabolism PhnG 3475532 4360796 RPE_3110 Rhodopseudomonas palustris BisA53 phosphonate metabolism PhnG YP_782027.1 3475074 R 316055 CDS YP_782028.1 115525117 4360797 3475645..3476373 1 NC_008435.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: rpd:RPD_3824 phosphonate C-P lyase system, transcriptional regulator PhnF; GntR family transcriptional regulator 3476373 4360797 RPE_3111 Rhodopseudomonas palustris BisA53 GntR family transcriptional regulator YP_782028.1 3475645 D 316055 CDS YP_782029.1 115525118 4360798 complement(3476526..3477392) 1 NC_008435.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4087 phosphonate uptake transporter; phosphonate ABC transporter inner membrane protein 3477392 4360798 RPE_3112 Rhodopseudomonas palustris BisA53 phosphonate ABC transporter inner membrane protein YP_782029.1 3476526 R 316055 CDS YP_782030.1 115525119 4360799 complement(3477389..3478270) 1 NC_008435.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_4086 phosphonate uptake transporter; phosphonate ABC transporter inner membrane protein 3478270 4360799 RPE_3113 Rhodopseudomonas palustris BisA53 phosphonate ABC transporter inner membrane protein YP_782030.1 3477389 R 316055 CDS YP_782031.1 115525120 4360800 complement(3478333..3479241) 1 NC_008435.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: rpb:RPB_4085 phosphonate-binding periplasmic protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 3479241 4360800 RPE_3114 Rhodopseudomonas palustris BisA53 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_782031.1 3478333 R 316055 CDS YP_782032.1 115525121 4360801 complement(3479387..3480265) 1 NC_008435.1 KEGG: rpa:RPA0700 PhnC protein, phosphonate ABC transporter, ATP-binding component; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphonate ABC transporter ATP-binding protein 3480265 4360801 RPE_3115 Rhodopseudomonas palustris BisA53 phosphonate ABC transporter ATP-binding protein YP_782032.1 3479387 R 316055 CDS YP_782033.1 115525122 4360802 3480364..3481032 1 NC_008435.1 KEGG: rpc:RPC_4433 putative acetyltransferase (virginiamycin, streptogramin A, chloramphenicol); putative acetyltransferase 3481032 4360802 RPE_3116 Rhodopseudomonas palustris BisA53 putative acetyltransferase YP_782033.1 3480364 D 316055 CDS YP_782034.1 115525123 4360803 3481029..3482222 1 NC_008435.1 TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rpc:RPC_4434 phosphonate metabolism PhnM; phosphonate metabolism protein PhnM 3482222 4360803 RPE_3117 Rhodopseudomonas palustris BisA53 phosphonate metabolism protein PhnM YP_782034.1 3481029 D 316055 CDS YP_782035.1 115525124 4360804 3482243..3482947 1 NC_008435.1 PFAM: protein of unknown function DUF1045; KEGG: rpa:RPA0703 hypothetical protein; hypothetical protein 3482947 4360804 RPE_3118 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782035.1 3482243 D 316055 CDS YP_782036.1 115525125 4360805 complement(3482990..3483250) 1 NC_008435.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 3483250 minE 4360805 minE Rhodopseudomonas palustris BisA53 cell division topological specificity factor MinE YP_782036.1 3482990 R 316055 CDS YP_782037.1 115525126 4360806 complement(3483247..3484062) 1 NC_008435.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: bja:blr4212 putative cell division inhibitor protein; septum site-determining protein MinD 3484062 4360806 RPE_3120 Rhodopseudomonas palustris BisA53 septum site-determining protein MinD YP_782037.1 3483247 R 316055 CDS YP_782038.1 115525127 4360807 complement(3484081..3484773) 1 NC_008435.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 3484773 minC 4360807 minC Rhodopseudomonas palustris BisA53 septum formation inhibitor YP_782038.1 3484081 R 316055 CDS YP_782039.1 115525128 4360808 complement(3485034..3486662) 1 NC_008435.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 3486662 4360808 RPE_3122 Rhodopseudomonas palustris BisA53 cobyric acid synthase YP_782039.1 3485034 R 316055 CDS YP_782040.1 115525129 4360809 complement(3486677..3487450) 1 NC_008435.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: rpd:RPD_2325 cobalamin 5'-phosphate synthase; cobalamin-5-phosphate synthase CobS 3487450 4360809 RPE_3123 Rhodopseudomonas palustris BisA53 cobalamin-5-phosphate synthase CobS YP_782040.1 3486677 R 316055 CDS YP_782041.1 115525130 4360811 3488263..3488589 1 NC_008435.1 KEGG: rpb:RPB_3280 hypothetical protein; hypothetical protein 3488589 4360811 RPE_3125 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782041.1 3488263 D 316055 CDS YP_782042.1 115525131 4360812 complement(3488655..3489488) 1 NC_008435.1 PFAM: periplasmic binding protein; KEGG: rpc:RPC_4256 periplasmic binding protein; periplasmic binding protein 3489488 4360812 RPE_3126 Rhodopseudomonas palustris BisA53 periplasmic binding protein YP_782042.1 3488655 R 316055 CDS YP_782043.1 115525132 4360813 complement(3489506..3490288) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2923 ABC transporter related; ABC transporter-like protein 3490288 4360813 RPE_3127 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782043.1 3489506 R 316055 CDS YP_782044.1 115525133 4360814 complement(3490285..3491304) 1 NC_008435.1 PFAM: transport system permease protein; KEGG: rpd:RPD_2924 transport system permease protein; transport system permease 3491304 4360814 RPE_3128 Rhodopseudomonas palustris BisA53 transport system permease YP_782044.1 3490285 R 316055 CDS YP_782045.1 115525134 4360815 complement(3491896..3492426) 1 NC_008435.1 KEGG: rpc:RPC_1917 MxaD protein, putative; MxaD protein 3492426 4360815 RPE_3129 Rhodopseudomonas palustris BisA53 MxaD protein YP_782045.1 3491896 R 316055 CDS YP_782046.1 115525135 4360816 complement(3492439..3493413) 1 NC_008435.1 SMART: von Willebrand factor, type A; KEGG: rpc:RPC_1916 von Willebrand factor, type A; von Willebrand factor, type A 3493413 4360816 RPE_3130 Rhodopseudomonas palustris BisA53 von Willebrand factor, type A YP_782046.1 3492439 R 316055 CDS YP_782047.1 115525136 4360817 complement(3493410..3494027) 1 NC_008435.1 KEGG: rpc:RPC_1915 hypothetical protein; hypothetical protein 3494027 4360817 RPE_3131 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782047.1 3493410 R 316055 CDS YP_782048.1 115525137 4360818 complement(3494024..3495022) 1 NC_008435.1 PFAM: von Willebrand factor, type A; KEGG: rpc:RPC_1914 von Willebrand factor, type A; von Willebrand factor, type A 3495022 4360818 RPE_3132 Rhodopseudomonas palustris BisA53 von Willebrand factor, type A YP_782048.1 3494024 R 316055 CDS YP_782049.1 115525138 4360819 complement(3495022..3495924) 1 NC_008435.1 KEGG: rpc:RPC_1913 MxaA protein, putative; MxaA protein 3495924 4360819 RPE_3133 Rhodopseudomonas palustris BisA53 MxaA protein YP_782049.1 3495022 R 316055 CDS YP_782050.1 115525139 4360820 complement(3495921..3496802) 1 NC_008435.1 KEGG: rpc:RPC_1912 hypothetical protein; hypothetical protein 3496802 4360820 RPE_3134 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782050.1 3495921 R 316055 CDS YP_782051.1 115525140 4360821 complement(3496814..3497866) 1 NC_008435.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_1911 ATPase associated with various cellular activities, AAA_3; ATPase 3497866 4360821 RPE_3135 Rhodopseudomonas palustris BisA53 ATPase YP_782051.1 3496814 R 316055 CDS YP_782052.1 115525141 4360822 complement(3497969..3498265) 1 NC_008435.1 PFAM: methanol dehydrogenase, beta subunit; KEGG: rpc:RPC_1910 methanol dehydrogenase, beta subunit; methanol dehydrogenase subunit beta 3498265 4360822 RPE_3136 Rhodopseudomonas palustris BisA53 methanol dehydrogenase subunit beta YP_782052.1 3497969 R 316055 CDS YP_782053.1 115525142 4360823 complement(3498259..3498921) 1 NC_008435.1 PFAM: cytochrome c, class I; KEGG: rpc:RPC_1909 cytochrome c, class I; cytochrome c, class I 3498921 4360823 RPE_3137 Rhodopseudomonas palustris BisA53 cytochrome c, class I YP_782053.1 3498259 R 316055 CDS YP_782054.1 115525143 4360824 complement(3498926..3499864) 1 NC_008435.1 SMART: extracellular solute-binding protein, family 3; KEGG: rpc:RPC_1908 extracellular solute-binding protein, family 3; extracellular solute-binding protein 3499864 4360824 RPE_3138 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_782054.1 3498926 R 316055 CDS YP_782055.1 115525144 4360825 complement(3499997..3501871) 1 NC_008435.1 PFAM: Pyrrolo-quinoline quinone; KEGG: rpc:RPC_1907 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 3501871 4360825 RPE_3139 Rhodopseudomonas palustris BisA53 Pyrrolo-quinoline quinone YP_782055.1 3499997 R 316055 CDS YP_782056.1 115525145 4360826 3502209..3502718 1 NC_008435.1 KEGG: rpc:RPC_1906 hypothetical protein; hypothetical protein 3502718 4360826 RPE_3140 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782056.1 3502209 D 316055 CDS YP_782057.1 115525146 4360827 3502724..3504196 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: rpc:RPC_1905 putative signal transduction histidine kinase; putative signal transduction histidine kinase 3504196 4360827 RPE_3141 Rhodopseudomonas palustris BisA53 putative signal transduction histidine kinase YP_782057.1 3502724 D 316055 CDS YP_782058.1 115525147 4360828 3504193..3504849 1 NC_008435.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rpc:RPC_1904 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3504849 4360828 RPE_3142 Rhodopseudomonas palustris BisA53 two component LuxR family transcriptional regulator YP_782058.1 3504193 D 316055 CDS YP_782059.1 115525148 4360829 complement(3505026..3505547) 1 NC_008435.1 PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0350 ferric uptake regulator, FUR family; ferric uptake regulator family protein 3505547 4360829 RPE_3143 Rhodopseudomonas palustris BisA53 ferric uptake regulator family protein YP_782059.1 3505026 R 316055 CDS YP_782060.1 115525149 4360830 complement(3505773..3506627) 1 NC_008435.1 TIGRFAM: TonB family protein; KEGG: rpa:RPA2129 possible energy transducer TonB, C-terminal region; TonB family protein 3506627 4360830 RPE_3144 Rhodopseudomonas palustris BisA53 TonB family protein YP_782060.1 3505773 R 316055 CDS YP_782061.1 115525150 4360831 complement(3506624..3507064) 1 NC_008435.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpa:RPA2128 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3507064 4360831 RPE_3145 Rhodopseudomonas palustris BisA53 biopolymer transport protein ExbD/TolR YP_782061.1 3506624 R 316055 CDS YP_782062.1 115525151 4360832 complement(3507068..3507856) 1 NC_008435.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpa:RPA2127 putative exbB, uptake of enterochelin; tonB-dependent uptake of B colicins; MotA/TolQ/ExbB proton channel 3507856 4360832 RPE_3146 Rhodopseudomonas palustris BisA53 MotA/TolQ/ExbB proton channel YP_782062.1 3507068 R 316055 CDS YP_782063.1 115525152 4360833 complement(3507849..3508364) 1 NC_008435.1 PFAM: protein of unknown function DUF1008; KEGG: rpc:RPC_1975 protein of unknown function DUF1008; hypothetical protein 3508364 4360833 RPE_3147 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782063.1 3507849 R 316055 CDS YP_782064.1 115525153 4360834 complement(3508402..3508788) 1 NC_008435.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rpc:RPC_1974 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3508788 4360834 RPE_3148 Rhodopseudomonas palustris BisA53 antibiotic biosynthesis monooxygenase YP_782064.1 3508402 R 316055 CDS YP_782065.1 115525154 4360835 complement(3508864..3511203) 1 NC_008435.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpc:RPC_1973 TonB-dependent haem/haemoglobin receptor; TonB-dependent heme/hemoglobin receptor family protein 3511203 4360835 RPE_3149 Rhodopseudomonas palustris BisA53 TonB-dependent heme/hemoglobin receptor family protein YP_782065.1 3508864 R 316055 CDS YP_782066.1 115525155 4360836 complement(3511398..3512072) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: rpc:RPC_1972 NmrA-like; NAD-dependent epimerase/dehydratase 3512072 4360836 RPE_3150 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_782066.1 3511398 R 316055 CDS YP_782067.1 115525156 4360837 complement(3512120..3513532) 1 NC_008435.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3513532 4360837 RPE_3151 Rhodopseudomonas palustris BisA53 coproporphyrinogen III oxidase YP_782067.1 3512120 R 316055 CDS YP_782068.1 115525157 4360838 3513866..3514072 1 NC_008435.1 KEGG: rpc:RPC_1970 hypothetical protein; hypothetical protein 3514072 4360838 RPE_3152 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782068.1 3513866 D 316055 CDS YP_782069.1 115525158 4360839 3514117..3515052 1 NC_008435.1 PFAM: periplasmic binding protein; KEGG: rpc:RPC_1969 periplasmic binding protein; periplasmic binding protein 3515052 4360839 RPE_3153 Rhodopseudomonas palustris BisA53 periplasmic binding protein YP_782069.1 3514117 D 316055 CDS YP_782070.1 115525159 4360840 3515049..3516143 1 NC_008435.1 PFAM: transport system permease protein; KEGG: rpc:RPC_1968 transport system permease protein; transport system permease 3516143 4360840 RPE_3154 Rhodopseudomonas palustris BisA53 transport system permease YP_782070.1 3515049 D 316055 CDS YP_782071.1 115525160 4360841 3516140..3516952 1 NC_008435.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 3516952 hmuV 4360841 hmuV Rhodopseudomonas palustris BisA53 hemin importer ATP-binding subunit YP_782071.1 3516140 D 316055 CDS YP_782072.1 115525161 4360842 3516949..3517239 1 NC_008435.1 hypothetical protein 3517239 4360842 RPE_3156 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782072.1 3516949 D 316055 CDS YP_782073.1 115525162 4360843 3517236..3517568 1 NC_008435.1 KEGG: rpc:RPC_3616 hypothetical protein; hypothetical protein 3517568 4360843 RPE_3157 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782073.1 3517236 D 316055 CDS YP_782074.1 115525163 4360844 complement(3517565..3517840) 1 NC_008435.1 KEGG: bja:blr8041 hypothetical protein; hypothetical protein 3517840 4360844 RPE_3158 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782074.1 3517565 R 316055 CDS YP_782075.1 115525164 4360845 3518162..3518494 1 NC_008435.1 hypothetical protein 3518494 4360845 RPE_3159 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782075.1 3518162 D 316055 CDS YP_782076.1 115525165 4360846 3518592..3519407 1 NC_008435.1 PFAM: protein of unknown function DUF155; KEGG: nha:Nham_0703 protein of unknown function DUF155; hypothetical protein 3519407 4360846 RPE_3160 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782076.1 3518592 D 316055 CDS YP_782077.1 115525166 4360847 complement(3519566..3521923) 1 NC_008435.1 KEGG: bur:Bcep18194_B2635 hypothetical protein; hypothetical protein 3521923 4360847 RPE_3161 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782077.1 3519566 R 316055 CDS YP_782078.1 115525167 4360848 complement(3522116..3523309) 1 NC_008435.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: sme:SMb21184 putative acetate kinase (acetokinase) protein; acetate kinase 3523309 4360848 RPE_3162 Rhodopseudomonas palustris BisA53 acetate kinase YP_782078.1 3522116 R 316055 CDS YP_782079.1 115525168 4360849 complement(3523319..3524752) 1 NC_008435.1 PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rru:Rru_A1468 phosphate butyryltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 3524752 4360849 RPE_3163 Rhodopseudomonas palustris BisA53 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase YP_782079.1 3523319 R 316055 CDS YP_782080.1 115525169 4360850 complement(3524783..3525553) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rsp:RSP_1256 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 3525553 4360850 RPE_3164 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782080.1 3524783 R 316055 CDS YP_782081.1 115525170 4360851 complement(3525702..3526244) 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA2052 putative phophinothricin N-acetyltransferase; N-acetyltransferase GCN5 3526244 4360851 RPE_3165 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_782081.1 3525702 R 316055 CDS YP_782082.1 115525171 4360852 complement(3526274..3528631) 1 NC_008435.1 PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: rpa:RPA2051 putative ornithine decarboxylase; ornithine decarboxylase 3528631 4360852 RPE_3166 Rhodopseudomonas palustris BisA53 ornithine decarboxylase YP_782082.1 3526274 R 316055 CDS YP_782083.1 115525172 4360853 complement(3528680..3528955) 1 NC_008435.1 hypothetical protein 3528955 4360853 RPE_3167 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782083.1 3528680 R 316055 CDS YP_782084.1 115525173 4360854 3529025..3530407 1 NC_008435.1 hypothetical protein 3530407 4360854 RPE_3168 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782084.1 3529025 D 316055 CDS YP_782085.1 115525174 4360855 complement(3530276..3532648) 1 NC_008435.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 3532648 4360855 RPE_3169 Rhodopseudomonas palustris BisA53 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_782085.1 3530276 R 316055 CDS YP_782086.1 115525175 4360856 complement(3533075..3533695) 1 NC_008435.1 PFAM: protein of unknown function DUF208; KEGG: rpc:RPC_3509 protein of unknown function DUF208; hypothetical protein 3533695 4360856 RPE_3170 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782086.1 3533075 R 316055 CDS YP_782087.1 115525176 4360857 complement(3533717..3534445) 1 NC_008435.1 KEGG: rpc:RPC_3510 methylisocitrate lyase; methylisocitrate lyase 3534445 4360857 RPE_3171 Rhodopseudomonas palustris BisA53 methylisocitrate lyase YP_782087.1 3533717 R 316055 CDS YP_782088.1 115525177 4360859 complement(3534737..3535186) 1 NC_008435.1 PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_3513 thioesterase superfamily; thioesterase superfamily protein 3535186 4360859 RPE_3173 Rhodopseudomonas palustris BisA53 thioesterase superfamily protein YP_782088.1 3534737 R 316055 CDS YP_782089.1 115525178 4360860 3535317..3536735 1 NC_008435.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: rpc:RPC_3514 transcriptional regulator, XRE family; XRE family transcriptional regulator 3536735 4360860 RPE_3174 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_782089.1 3535317 D 316055 CDS YP_782090.1 115525179 4360861 complement(3536751..3537410) 1 NC_008435.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: rpc:RPC_3515 ribonucleoside-triphosphate reductase, anaerobic-like; anaerobic ribonucleoside-triphosphate reductase activating protein 3537410 4360861 RPE_3175 Rhodopseudomonas palustris BisA53 anaerobic ribonucleoside-triphosphate reductase activating protein YP_782090.1 3536751 R 316055 CDS YP_782091.1 115525180 4360862 complement(3537595..3539616) 1 NC_008435.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 3539616 4360862 RPE_3176 Rhodopseudomonas palustris BisA53 anaerobic ribonucleoside triphosphate reductase YP_782091.1 3537595 R 316055 CDS YP_782092.1 115525181 4360863 complement(3540221..3540892) 1 NC_008435.1 PFAM: ribonucleotide reductase; KEGG: rpc:RPC_3518 ribonucleoside-diphosphate reductase; ribonucleotide reductase 3540892 4360863 RPE_3177 Rhodopseudomonas palustris BisA53 ribonucleotide reductase YP_782092.1 3540221 R 316055 CDS YP_782093.1 115525182 4360864 complement(3540920..3541078) 1 NC_008435.1 KEGG: zmo:ZMO1201 glycine/serine hydroxymethyltransferase; glycine/serine hydroxymethyltransferase 3541078 4360864 RPE_3178 Rhodopseudomonas palustris BisA53 glycine/serine hydroxymethyltransferase YP_782093.1 3540920 R 316055 CDS YP_782094.1 115525183 4360865 3541737..3541928 1 NC_008435.1 KEGG: rpd:RPD_3220 hypothetical protein; hypothetical protein 3541928 4360865 RPE_3179 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782094.1 3541737 D 316055 CDS YP_782095.1 115525184 4360866 3542191..3542976 1 NC_008435.1 PFAM: NLPA lipoprotein; KEGG: rpa:RPA1430 putative outer membrane protein; NLPA lipoprotein 3542976 4360866 RPE_3180 Rhodopseudomonas palustris BisA53 NLPA lipoprotein YP_782095.1 3542191 D 316055 CDS YP_782096.1 115525185 4360867 3543057..3544394 1 NC_008435.1 KEGG: rpd:RPD_3222 phenylacetate--CoA ligase; phenylacetate--CoA ligase 3544394 4360867 RPE_3181 Rhodopseudomonas palustris BisA53 phenylacetate--CoA ligase YP_782096.1 3543057 D 316055 CDS YP_782097.1 115525186 4360868 complement(3544595..3545368) 1 NC_008435.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: rpd:RPD_3223 lipoprotein YaeC; YaeC family lipoprotein 3545368 4360868 RPE_3182 Rhodopseudomonas palustris BisA53 YaeC family lipoprotein YP_782097.1 3544595 R 316055 CDS YP_782098.1 115525187 4360869 complement(3545398..3546063) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpd:RPD_3224 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3546063 4360869 RPE_3183 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport system inner membrane protein YP_782098.1 3545398 R 316055 CDS YP_782099.1 115525188 4360870 complement(3546053..3547168) 1 NC_008435.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 3547168 metN 4360870 metN Rhodopseudomonas palustris BisA53 DL-methionine transporter ATP-binding subunit YP_782099.1 3546053 R 316055 CDS YP_782100.1 115525189 4360871 complement(3547339..3548289) 1 NC_008435.1 KEGG: rpd:RPD_3226 serine O-acetyltransferase; Serine O-acetyltransferase 3548289 4360871 RPE_3185 Rhodopseudomonas palustris BisA53 Serine O-acetyltransferase YP_782100.1 3547339 R 316055 CDS YP_782101.1 115525190 4360872 complement(3548294..3550282) 1 NC_008435.1 TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; KEGG: rpd:RPD_3227 cysteine desulfurases, SufS subfamily; SufS subfamily cysteine desulfurase 3550282 4360872 RPE_3186 Rhodopseudomonas palustris BisA53 SufS subfamily cysteine desulfurase YP_782101.1 3548294 R 316055 CDS YP_782102.1 115525191 4360873 complement(3550269..3551213) 1 NC_008435.1 KEGG: rpd:RPD_3228 hypothetical protein; hypothetical protein 3551213 4360873 RPE_3187 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782102.1 3550269 R 316055 CDS YP_782103.1 115525192 4360874 complement(3551557..3552810) 1 NC_008435.1 PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpa:RPA2617 possible vanadium nitrogenase associated protein VnfN (U51863); oxidoreductase/nitrogenase, component 1 3552810 4360874 RPE_3188 Rhodopseudomonas palustris BisA53 oxidoreductase/nitrogenase, component 1 YP_782103.1 3551557 R 316055 CDS YP_782104.1 115525193 4360875 complement(3552810..3554168) 1 NC_008435.1 PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpa:RPA2616 possible nitrogenase iron-molybdenum cofactor biosynthesis protein NifE homolog; oxidoreductase/nitrogenase, component 1 3554168 4360875 RPE_3189 Rhodopseudomonas palustris BisA53 oxidoreductase/nitrogenase, component 1 YP_782104.1 3552810 R 316055 CDS YP_782105.1 115525194 4360876 complement(3554170..3555045) 1 NC_008435.1 PFAM: NifH/frxC-family protein; KEGG: rpa:RPA2615 putative nitrogenase iron protein (nitrogenase component II) (nitrogenase reductase); nitrogenase 3555045 4360876 RPE_3190 Rhodopseudomonas palustris BisA53 nitrogenase YP_782105.1 3554170 R 316055 CDS YP_782106.1 115525195 4360877 complement(3555091..3556524) 1 NC_008435.1 PFAM: Radical SAM domain protein; KEGG: rpa:RPA2614 hypothetical protein; radical SAM domain-containing protein 3556524 4360877 RPE_3191 Rhodopseudomonas palustris BisA53 radical SAM domain-containing protein YP_782106.1 3555091 R 316055 CDS YP_782107.1 115525196 4360878 3556688..3557644 1 NC_008435.1 KEGG: rpa:RPA2608 possible sulfonate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 3557644 4360878 RPE_3192 Rhodopseudomonas palustris BisA53 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein YP_782107.1 3556688 D 316055 CDS YP_782108.1 115525197 4360879 3557975..3559150 1 NC_008435.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 3559150 4360879 RPE_3193 Rhodopseudomonas palustris BisA53 alkanesulfonate monooxygenase YP_782108.1 3557975 D 316055 CDS YP_782109.1 115525198 4360880 3559147..3559953 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2611 putative aliphatic sulfonate transport membrane component. permease subunit of an ABC transporter; binding-protein-dependent transport system inner membrane protein 3559953 4360880 RPE_3194 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport system inner membrane protein YP_782109.1 3559147 D 316055 CDS YP_782110.1 115525199 4360881 3559963..3560808 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA2610 aliphatic sulfonate transport ATP-binding protein, subunit of ABC transporter; ABC transporter-like protein 3560808 4360881 RPE_3195 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782110.1 3559963 D 316055 CDS YP_782111.1 115525200 4360882 3560817..3561389 1 NC_008435.1 PFAM: flavin reductase domain protein, FMN-binding; KEGG: bja:bll7007 putative oxidoreductase; flavin reductase domain-containing protein 3561389 4360882 RPE_3196 Rhodopseudomonas palustris BisA53 flavin reductase domain-containing protein YP_782111.1 3560817 D 316055 CDS YP_782112.1 115525201 4360883 complement(3561439..3562416) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: sil:SPO0796 hypothetical protein; NAD-dependent epimerase/dehydratase 3562416 4360883 RPE_3197 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_782112.1 3561439 R 316055 CDS YP_782113.1 115525202 4360884 complement(3562413..3563327) 1 NC_008435.1 PFAM: Bile acid:sodium symporter; KEGG: sil:SPO0797 bile acid transporter family protein; bile acid:sodium symporter 3563327 4360884 RPE_3198 Rhodopseudomonas palustris BisA53 bile acid:sodium symporter YP_782113.1 3562413 R 316055 CDS YP_782114.1 115525203 4360885 complement(3563338..3563670) 1 NC_008435.1 KEGG: afu:AF2100 acetolactate synthase large subunit; acetolactate synthase large subunit 3563670 4360885 RPE_3199 Rhodopseudomonas palustris BisA53 acetolactate synthase large subunit YP_782114.1 3563338 R 316055 CDS YP_782115.1 115525204 4360886 complement(3563667..3564263) 1 NC_008435.1 PFAM: thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: afu:AF2100 acetolactate synthase large subunit; thiamine pyrophosphate binding domain-containing protein 3564263 4360886 RPE_3200 Rhodopseudomonas palustris BisA53 thiamine pyrophosphate binding domain-containing protein YP_782115.1 3563667 R 316055 CDS YP_782116.1 115525205 4360887 complement(3564347..3566116) 1 NC_008435.1 catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source; sulfoacetaldehyde acetyltransferase 3566116 4360887 RPE_3201 Rhodopseudomonas palustris BisA53 sulfoacetaldehyde acetyltransferase YP_782116.1 3564347 R 316055 CDS YP_782117.1 115525206 4360888 complement(3566183..3567103) 1 NC_008435.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: mth:MTH563 succinyl-CoA synthetase alpha chain; succinyl-CoA synthetase subunit alpha 3567103 4360888 RPE_3202 Rhodopseudomonas palustris BisA53 succinyl-CoA synthetase subunit alpha YP_782117.1 3566183 R 316055 CDS YP_782118.1 115525207 4360889 complement(3567100..3568227) 1 NC_008435.1 PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG: ttj:TTHA0538 succinyl-CoA synthetase beta chain; succinate--CoA ligase (ADP-forming) 3568227 4360889 RPE_3203 Rhodopseudomonas palustris BisA53 succinate--CoA ligase (ADP-forming) YP_782118.1 3567100 R 316055 CDS YP_782119.1 115525208 4360890 complement(3568244..3569680) 1 NC_008435.1 KEGG: dsy:DSY0244 hypothetical protein; hypothetical protein 3569680 4360890 RPE_3204 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782119.1 3568244 R 316055 CDS YP_782120.1 115525209 4360891 3570045..3571013 1 NC_008435.1 KEGG: pst:PSPTO2423 ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3; aliphatic sulfonate ABC transporter periplasmic ligand-binding protein 3571013 4360891 RPE_3205 Rhodopseudomonas palustris BisA53 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein YP_782120.1 3570045 D 316055 CDS YP_782121.1 115525210 4360892 complement(3571861..3572103) 1 NC_008435.1 hypothetical protein 3572103 4360892 RPE_3206 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782121.1 3571861 R 316055 CDS YP_782122.1 115525211 4360893 complement(3572229..3572960) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3423 ABC transporter ATP-binding protein; ABC transporter-like protein 3572960 4360893 RPE_3207 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782122.1 3572229 R 316055 CDS YP_782123.1 115525212 4360894 complement(3572957..3574711) 1 NC_008435.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3424 ABC transporter ATP-binding/permease protein; ABC transporter-like protein 3574711 4360894 RPE_3208 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782123.1 3572957 R 316055 CDS YP_782124.1 115525213 4360895 complement(3574708..3575763) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: bja:bll3425 ABC transporter permease protein; inner-membrane translocator 3575763 4360895 RPE_3209 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_782124.1 3574708 R 316055 CDS YP_782125.1 115525214 4360896 complement(3575773..3576075) 1 NC_008435.1 KEGG: bja:blr6087 3-hydroxybutyryl-CoA dehydrogenase; hypothetical protein 3576075 4360896 RPE_3210 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782125.1 3575773 R 316055 CDS YP_782126.1 115525215 4360897 3576558..3577712 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:bll3426 ABC transporter substrate-binding protein; extracellular ligand-binding receptor 3577712 4360897 RPE_3211 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_782126.1 3576558 D 316055 CDS YP_782127.1 115525216 4360898 complement(3577780..3578970) 1 NC_008435.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: eba:ebA2066 putative CoA-transferase protein, (family III); L-carnitine dehydratase/bile acid-inducible protein F 3578970 4360898 RPE_3212 Rhodopseudomonas palustris BisA53 L-carnitine dehydratase/bile acid-inducible protein F YP_782127.1 3577780 R 316055 CDS YP_782128.1 115525217 4360899 complement(3578967..3581351) 1 NC_008435.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: eba:ebA2064 large subunit of molybdenum enzyme; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 3581351 4360899 RPE_3213 Rhodopseudomonas palustris BisA53 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_782128.1 3578967 R 316055 CDS YP_782129.1 115525218 4360900 complement(3581363..3581833) 1 NC_008435.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: eba:ebA2063 small Fe/S-containing subunit of molybdenum enzyme; 2Fe-2S iron-sulfur cluster binding domain-containing protein 3581833 4360900 RPE_3214 Rhodopseudomonas palustris BisA53 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_782129.1 3581363 R 316055 CDS YP_782130.1 115525219 4360901 complement(3581817..3582683) 1 NC_008435.1 PFAM: molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: eba:ebA2062 medium FAD-binding subunit of molybdenum enzyme; molybdopterin dehydrogenase protein 3582683 4360901 RPE_3215 Rhodopseudomonas palustris BisA53 molybdopterin dehydrogenase protein YP_782130.1 3581817 R 316055 CDS YP_782131.1 115525220 4360902 complement(3582683..3584380) 1 NC_008435.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: eba:ebA2053 hydantoin utilization protein B; 5-oxoprolinase 3584380 4360902 RPE_3216 Rhodopseudomonas palustris BisA53 5-oxoprolinase YP_782131.1 3582683 R 316055 CDS YP_782132.1 115525221 4360903 complement(3584377..3586506) 1 NC_008435.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: eba:ebA2051 hydantoin utilization protein A; 5-oxoprolinase 3586506 4360903 RPE_3217 Rhodopseudomonas palustris BisA53 5-oxoprolinase YP_782132.1 3584377 R 316055 CDS YP_782133.1 115525222 4360904 complement(3586503..3588038) 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eba:ebA2050 putative ADP-producing CoA ligase, similar to feruloyl-CoA synthetase; AMP-dependent synthetase and ligase 3588038 4360904 RPE_3218 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_782133.1 3586503 R 316055 CDS YP_782134.1 115525223 4360905 complement(3588043..3589251) 1 NC_008435.1 PFAM: Thiolase; KEGG: eba:ebA2049 putative beta-oxoacyl-CoA thiolase; thiolase 3589251 4360905 RPE_3219 Rhodopseudomonas palustris BisA53 thiolase YP_782134.1 3588043 R 316055 CDS YP_782135.1 115525224 4360906 complement(3589235..3589936) 1 NC_008435.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: eba:ebA2047 transcriptional regulator, GntR family; GntR family transcriptional regulator 3589936 4360906 RPE_3220 Rhodopseudomonas palustris BisA53 GntR family transcriptional regulator YP_782135.1 3589235 R 316055 CDS YP_782136.1 115525225 4360907 3590018..3590818 1 NC_008435.1 KEGG: bxe:Bxe_B2310 hypothetical protein; hypothetical protein 3590818 4360907 RPE_3221 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782136.1 3590018 D 316055 CDS YP_782137.1 115525226 4360908 3590829..3591965 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: eba:ebA2055 putative acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase 3591965 4360908 RPE_3222 Rhodopseudomonas palustris BisA53 butyryl-CoA dehydrogenase YP_782137.1 3590829 D 316055 CDS YP_782138.1 115525227 4360909 3591958..3592353 1 NC_008435.1 TIGRFAM: Methylmalonyl-CoA mutase-like; PFAM: cobalamin B12-binding domain protein; KEGG: eba:ebD52 methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding); methylmalonyl-CoA mutase-like protein 3592353 4360909 RPE_3223 Rhodopseudomonas palustris BisA53 methylmalonyl-CoA mutase-like protein YP_782138.1 3591958 D 316055 CDS YP_782139.1 115525228 4360910 3592350..3593981 1 NC_008435.1 KEGG: eba:ebA2060 methylmalonyl-CoA mutase subunit alpha; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 3593981 4360910 RPE_3224 Rhodopseudomonas palustris BisA53 methylmalonyl-CoA mutase large subunit YP_782139.1 3592350 D 316055 CDS YP_782140.1 115525229 4360911 3593998..3596013 1 NC_008435.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: eba:ebA2038 fusion of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase 3596013 4360911 RPE_3225 Rhodopseudomonas palustris BisA53 3-hydroxyacyl-CoA dehydrogenase YP_782140.1 3593998 D 316055 CDS YP_782141.1 115525230 4360912 complement(3596138..3596533) 1 NC_008435.1 PFAM: Endoribonuclease L-PSP; KEGG: eba:ebA2097 hypothetical protein; endoribonuclease L-PSP 3596533 4360912 RPE_3226 Rhodopseudomonas palustris BisA53 endoribonuclease L-PSP YP_782141.1 3596138 R 316055 CDS YP_782142.1 115525231 4360913 complement(3596542..3598206) 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mlo:mlr0619 probable acid-CoA ligase; AMP-dependent synthetase and ligase 3598206 4360913 RPE_3227 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_782142.1 3596542 R 316055 CDS YP_782143.1 115525232 4360914 complement(3598257..3599039) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rso:RS02008 probable oxidoreductase protein; short-chain dehydrogenase/reductase SDR 3599039 4360914 RPE_3228 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782143.1 3598257 R 316055 CDS YP_782144.1 115525233 4360915 complement(3599036..3601357) 1 NC_008435.1 catalyzes the conversion of salicylyl-CoA to gentisyl-CoA; salicylyl-CoA 5-hydroxylase 3601357 4360915 RPE_3229 Rhodopseudomonas palustris BisA53 salicylyl-CoA 5-hydroxylase YP_782144.1 3599036 R 316055 CDS YP_782145.1 115525234 4360916 3601473..3602000 1 NC_008435.1 PFAM: regulatory protein, MarR; KEGG: bja:bll6077 transcriptional regulatory protein; MarR family transcriptional regulator 3602000 4360916 RPE_3230 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_782145.1 3601473 D 316055 CDS YP_782146.1 115525235 4360917 complement(3602226..3602630) 1 NC_008435.1 PFAM: BLUF domain protein; KEGG: rpc:RPC_2562 BLUF; BLUF domain-containing protein 3602630 4360917 RPE_3231 Rhodopseudomonas palustris BisA53 BLUF domain-containing protein YP_782146.1 3602226 R 316055 CDS YP_782147.1 115525236 4360918 3602861..3603064 1 NC_008435.1 KEGG: sil:SPO2719 hypothetical protein; hypothetical protein 3603064 4360918 RPE_3232 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782147.1 3602861 D 316055 CDS YP_782148.1 115525237 4360919 3603061..3603336 1 NC_008435.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: mlo:msl7485 hypothetical protein; AbrB family transcriptional regulator 3603336 4360919 RPE_3233 Rhodopseudomonas palustris BisA53 AbrB family transcriptional regulator YP_782148.1 3603061 D 316055 CDS YP_782149.1 115525238 4360920 3603323..3603712 1 NC_008435.1 KEGG: nwi:Nwi_3084 PilT protein; PilT protein 3603712 4360920 RPE_3234 Rhodopseudomonas palustris BisA53 PilT protein YP_782149.1 3603323 D 316055 CDS YP_782150.1 115525239 4360921 complement(3603791..3604768) 1 NC_008435.1 hypothetical protein 3604768 4360921 RPE_3235 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782150.1 3603791 R 316055 CDS YP_782151.1 115525240 4360922 3605465..3605707 1 NC_008435.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: sme:SMc00392 hypothetical protein; prevent-host-death family protein 3605707 4360922 RPE_3236 Rhodopseudomonas palustris BisA53 prevent-host-death family protein YP_782151.1 3605465 D 316055 CDS YP_782152.1 115525241 4360924 complement(3606077..3620032) 1 NC_008435.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: rpc:RPC_2997 filamentous haemagglutinin-like; filamentous hemagglutinin outer membrane protein 3620032 4360924 RPE_3238 Rhodopseudomonas palustris BisA53 filamentous hemagglutinin outer membrane protein YP_782152.1 3606077 R 316055 CDS YP_782153.1 115525242 4360925 complement(3620153..3621178) 1 NC_008435.1 PFAM: FecR protein; KEGG: rpa:RPA1340 probable FecR, iron siderophore sensor protein; putative FecR protein 3621178 4360925 RPE_3239 Rhodopseudomonas palustris BisA53 putative FecR protein YP_782153.1 3620153 R 316055 CDS YP_782154.1 115525243 4360926 complement(3621189..3621830) 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: pae:PA0675 probable sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3621830 4360926 RPE_3240 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_782154.1 3621189 R 316055 CDS YP_782155.1 115525244 4360927 complement(3621817..3622476) 1 NC_008435.1 KEGG: rpa:RPA1338 hypothetical protein; hypothetical protein 3622476 4360927 RPE_3241 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782155.1 3621817 R 316055 CDS YP_782156.1 115525245 4360928 3622785..3622952 1 NC_008435.1 KEGG: bja:bll3896 putative transposase; putative transposase 3622952 4360928 RPE_3242 Rhodopseudomonas palustris BisA53 putative transposase YP_782156.1 3622785 D 316055 CDS YP_782157.1 115525246 4360929 complement(3623089..3623568) 1 NC_008435.1 KEGG: rpc:RPC_1899 hypothetical protein; hypothetical protein 3623568 4360929 RPE_3243 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782157.1 3623089 R 316055 CDS YP_782158.1 115525247 4360930 complement(3624015..3624650) 1 NC_008435.1 KEGG: rpc:RPC_3137 hypothetical protein; hypothetical protein 3624650 4360930 RPE_3244 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782158.1 3624015 R 316055 CDS YP_782159.1 115525248 4360931 3624966..3625265 1 NC_008435.1 KEGG: rpa:RPA2264 hypothetical protein; hypothetical protein 3625265 4360931 RPE_3245 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782159.1 3624966 D 316055 CDS YP_782160.1 115525249 4360932 3625262..3625693 1 NC_008435.1 PFAM: PilT protein domain protein; KEGG: mlo:mlr5903 plasmid stabilization protein; PilT domain-containing protein 3625693 4360932 RPE_3246 Rhodopseudomonas palustris BisA53 PilT domain-containing protein YP_782160.1 3625262 D 316055 CDS YP_782161.1 115525250 4360933 3625817..3627022 1 NC_008435.1 KEGG: atc:AGR_pAT_24 hypothetical protein; hypothetical protein 3627022 4360933 RPE_3247 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782161.1 3625817 D 316055 CDS YP_782162.1 115525251 4360934 3627702..3628139 1 NC_008435.1 hypothetical protein 3628139 4360934 RPE_3248 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782162.1 3627702 D 316055 CDS YP_782163.1 115525252 4360935 complement(3628172..3630235) 1 NC_008435.1 KEGG: aba:Acid345_4269 hypothetical protein; hypothetical protein 3630235 4360935 RPE_3249 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782163.1 3628172 R 316055 CDS YP_782164.1 115525253 4360936 complement(3630236..3631207) 1 NC_008435.1 KEGG: oih:OB0176 hypothetical protein; hypothetical protein 3631207 4360936 RPE_3250 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782164.1 3630236 R 316055 CDS YP_782165.1 115525254 4360937 complement(3631200..3633875) 1 NC_008435.1 KEGG: eba:ebA6352 endonuclease; endonuclease 3633875 4360937 RPE_3251 Rhodopseudomonas palustris BisA53 endonuclease YP_782165.1 3631200 R 316055 CDS YP_782166.1 115525255 4360938 complement(3633872..3635350) 1 NC_008435.1 KEGG: aba:Acid345_4266 hypothetical protein; hypothetical protein 3635350 4360938 RPE_3252 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782166.1 3633872 R 316055 CDS YP_782167.1 115525256 4360939 complement(3635350..3635772) 1 NC_008435.1 PFAM: DNA mismatch endonuclease vsr; KEGG: dvu:DVU2843 DNA mismatch endonuclease Vsr, putative; DNA mismatch endonuclease vsr 3635772 4360939 RPE_3253 Rhodopseudomonas palustris BisA53 DNA mismatch endonuclease vsr YP_782167.1 3635350 R 316055 CDS YP_782168.1 115525257 4360940 complement(3635769..3637538) 1 NC_008435.1 KEGG: aba:Acid345_4264 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 3637538 4360940 RPE_3254 Rhodopseudomonas palustris BisA53 DNA-cytosine methyltransferase YP_782168.1 3635769 R 316055 CDS YP_782169.1 115525258 4360941 3637778..3638605 1 NC_008435.1 KEGG: plt:Plut_0513 hypothetical protein; hypothetical protein 3638605 4360941 RPE_3255 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782169.1 3637778 D 316055 CDS YP_782170.1 115525259 4360942 3638602..3639462 1 NC_008435.1 KEGG: nwi:Nwi_0261 hypothetical protein; hypothetical protein 3639462 4360942 RPE_3256 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782170.1 3638602 D 316055 CDS YP_782171.1 115525260 4360943 complement(3639459..3639677) 1 NC_008435.1 PFAM: Conjugal transfer TraD family protein; KEGG: rpc:RPC_4518 conjugal transfer TraD; conjugal transfer TraD family protein 3639677 4360943 RPE_3257 Rhodopseudomonas palustris BisA53 conjugal transfer TraD family protein YP_782171.1 3639459 R 316055 CDS YP_782172.1 115525261 4360944 complement(3639679..3640020) 1 NC_008435.1 KEGG: rpd:RPD_2275 hypothetical protein; hypothetical protein 3640020 4360944 RPE_3258 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782172.1 3639679 R 316055 CDS YP_782173.1 115525262 4360945 3640081..3643197 1 NC_008435.1 MobA/MobL family protein; conjugal transfer relaxase TraA 3643197 4360945 RPE_3259 Rhodopseudomonas palustris BisA53 conjugal transfer relaxase TraA YP_782173.1 3640081 D 316055 CDS YP_782174.1 115525263 4360946 3643328..3643558 1 NC_008435.1 PFAM: Prophage CP4-57 regulatory; KEGG: rpc:RPC_4521 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA 3643558 4360946 RPE_3260 Rhodopseudomonas palustris BisA53 phage transcriptional regulator, AlpA YP_782174.1 3643328 D 316055 CDS YP_782175.1 115525264 4360947 complement(3643560..3644909) 1 NC_008435.1 PFAM: phage integrase family protein; KEGG: dar:Daro_2336 phage integrase; phage integrase family protein 3644909 4360947 RPE_3261 Rhodopseudomonas palustris BisA53 phage integrase family protein YP_782175.1 3643560 R 316055 CDS YP_782176.1 115525265 4360948 complement(3645131..3646816) 1 NC_008435.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 3646816 guaA 4360948 guaA Rhodopseudomonas palustris BisA53 GMP synthase YP_782176.1 3645131 R 316055 CDS YP_782177.1 115525266 4360949 complement(3647827..3649131) 1 NC_008435.1 PFAM: Fmu (Sun) domain protein; KEGG: rpc:RPC_3064 Fmu (Sun); Fmu (Sun) domain-containing protein 3649131 4360949 RPE_3263 Rhodopseudomonas palustris BisA53 Fmu (Sun) domain-containing protein YP_782177.1 3647827 R 316055 CDS YP_782178.1 115525267 4360950 complement(3649175..3649597) 1 NC_008435.1 PFAM: protein of unknown function DUF1123; KEGG: rpb:RPB_3191 protein of unknown function DUF1123; hypothetical protein 3649597 4360950 RPE_3264 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782178.1 3649175 R 316055 CDS YP_782179.1 115525268 4360952 complement(3650462..3651496) 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: rpc:RPC_3068 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 3651496 4360952 RPE_3266 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_782179.1 3650462 R 316055 CDS YP_782180.1 115525269 4360953 complement(3651559..3652125) 1 NC_008435.1 KEGG: rpc:RPC_3069 hypothetical protein; hypothetical protein 3652125 4360953 RPE_3267 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782180.1 3651559 R 316055 CDS YP_782181.1 115525270 4360954 complement(3652316..3653809) 1 NC_008435.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 3653809 4360954 RPE_3268 Rhodopseudomonas palustris BisA53 inosine 5'-monophosphate dehydrogenase YP_782181.1 3652316 R 316055 CDS YP_782182.1 115525271 4360955 complement(3654010..3654258) 1 NC_008435.1 KEGG: rpc:RPC_3074 hypothetical protein; hypothetical protein 3654258 4360955 RPE_3269 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782182.1 3654010 R 316055 CDS YP_782183.1 115525272 4360956 3655805..3656734 1 NC_008435.1 hypothetical protein 3656734 4360956 RPE_3270 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782183.1 3655805 D 316055 CDS YP_782184.1 115525273 4360957 3657271..3658746 1 NC_008435.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3075 major facilitator superfamily MFS_1; EmrB/QacA family drug resistance transporter 3658746 4360957 RPE_3271 Rhodopseudomonas palustris BisA53 EmrB/QacA family drug resistance transporter YP_782184.1 3657271 D 316055 CDS YP_782185.1 115525274 4360958 complement(3658878..3659585) 1 NC_008435.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: rpc:RPC_3081 ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA methyltransferase RrmJ/FtsJ 3659585 4360958 RPE_3272 Rhodopseudomonas palustris BisA53 ribosomal RNA methyltransferase RrmJ/FtsJ YP_782185.1 3658878 R 316055 CDS YP_782186.1 115525275 4360959 complement(3659654..3660646) 1 NC_008435.1 PFAM: Ppx/GppA phosphatase; KEGG: rpd:RPD_2258 Ppx/GppA phosphatase; Ppx/GppA phosphatase 3660646 4360959 RPE_3273 Rhodopseudomonas palustris BisA53 Ppx/GppA phosphatase YP_782186.1 3659654 R 316055 CDS YP_782187.1 115525276 4360960 complement(3660987..3661448) 1 NC_008435.1 PFAM: DoxX family protein; KEGG: rpc:RPC_2341 DoxX; hypothetical protein 3661448 4360960 RPE_3274 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782187.1 3660987 R 316055 CDS YP_782188.1 115525277 4360961 complement(3661636..3663945) 1 NC_008435.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 3663945 4360961 RPE_3275 Rhodopseudomonas palustris BisA53 malic enzyme YP_782188.1 3661636 R 316055 CDS YP_782189.1 115525278 4360962 complement(3664135..3665907) 1 NC_008435.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 3665907 aspS 4360962 aspS Rhodopseudomonas palustris BisA53 aspartyl-tRNA synthetase YP_782189.1 3664135 R 316055 CDS YP_782190.1 115525279 4360963 3666003..3667580 1 NC_008435.1 PFAM: protein of unknown function UPF0061; KEGG: rpc:RPC_2335 protein of unknown function UPF0061; hypothetical protein 3667580 4360963 RPE_3277 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782190.1 3666003 D 316055 CDS YP_782191.1 115525280 4360964 3667696..3668874 1 NC_008435.1 TIGRFAM: ribonuclease D; PFAM: 3'-5' exonuclease; KEGG: rpc:RPC_2334 ribonuclease D; ribonuclease D 3668874 4360964 RPE_3278 Rhodopseudomonas palustris BisA53 ribonuclease D YP_782191.1 3667696 D 316055 CDS YP_782192.1 115525281 4360965 3668871..3669794 1 NC_008435.1 PFAM: protein of unknown function UPF0187; KEGG: rpd:RPD_2950 protein of unknown function UPF0187; hypothetical protein 3669794 4360965 RPE_3279 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782192.1 3668871 D 316055 CDS YP_782193.1 115525282 4360966 complement(3669817..3671325) 1 NC_008435.1 PFAM: Ppx/GppA phosphatase; KEGG: rpc:RPC_2330 Ppx/GppA phosphatase; Ppx/GppA phosphatase 3671325 4360966 RPE_3280 Rhodopseudomonas palustris BisA53 Ppx/GppA phosphatase YP_782193.1 3669817 R 316055 CDS YP_782194.1 115525283 4360967 complement(3671350..3673611) 1 NC_008435.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3673611 4360967 RPE_3281 Rhodopseudomonas palustris BisA53 polyphosphate kinase YP_782194.1 3671350 R 316055 CDS YP_782195.1 115525284 4360968 complement(3673704..3674378) 1 NC_008435.1 KEGG: rpc:RPC_2328 chromosomal replication initiator, DnaA; hypothetical protein 3674378 4360968 RPE_3282 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782195.1 3673704 R 316055 CDS YP_782196.1 115525285 4360969 complement(3674438..3674983) 1 NC_008435.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rpc:RPC_2327 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 3674983 4360969 RPE_3283 Rhodopseudomonas palustris BisA53 CDP-alcohol phosphatidyltransferase YP_782196.1 3674438 R 316055 CDS YP_782197.1 115525286 4360970 3675250..3676323 1 NC_008435.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3676323 4360970 RPE_3284 Rhodopseudomonas palustris BisA53 phosphoribosylaminoimidazole synthetase YP_782197.1 3675250 D 316055 CDS YP_782198.1 115525287 4360971 3676329..3676979 1 NC_008435.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: rpc:RPC_2325 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 3676979 4360971 RPE_3285 Rhodopseudomonas palustris BisA53 phosphoribosylglycinamide formyltransferase YP_782198.1 3676329 D 316055 CDS YP_782199.1 115525288 4360972 complement(3677049..3677252) 1 NC_008435.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rpa:RPA3053 cold shock DNA binding protein; cold-shock DNA-binding domain-containing protein 3677252 4360972 RPE_3286 Rhodopseudomonas palustris BisA53 cold-shock DNA-binding domain-containing protein YP_782199.1 3677049 R 316055 CDS YP_782200.1 115525289 4360973 complement(3677694..3678116) 1 NC_008435.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 3678116 ndk 4360973 ndk Rhodopseudomonas palustris BisA53 nucleoside diphosphate kinase YP_782200.1 3677694 R 316055 CDS YP_782201.1 115525290 4360974 3678603..3680468 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nha:Nham_2336 ABC transporter related; ABC transporter-like protein 3680468 4360974 RPE_3288 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782201.1 3678603 D 316055 CDS YP_782202.1 115525291 4360975 complement(3680663..3681220) 1 NC_008435.1 KEGG: rpc:RPC_2316 hypothetical protein; hypothetical protein 3681220 4360975 RPE_3289 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782202.1 3680663 R 316055 CDS YP_782203.1 115525292 4360976 complement(3681326..3681778) 1 NC_008435.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 3681778 4360976 RPE_3290 Rhodopseudomonas palustris BisA53 DNA polymerase III subunit chi YP_782203.1 3681326 R 316055 CDS YP_782204.1 115525293 4360977 complement(3681775..3683271) 1 NC_008435.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 3683271 4360977 RPE_3291 Rhodopseudomonas palustris BisA53 leucyl aminopeptidase YP_782204.1 3681775 R 316055 CDS YP_782205.1 115525294 4360978 3683651..3684817 1 NC_008435.1 PFAM: permease YjgP/YjgQ family protein; KEGG: rpc:RPC_2313 permease YjgP/YjgQ; permease YjgP/YjgQ 3684817 4360978 RPE_3292 Rhodopseudomonas palustris BisA53 permease YjgP/YjgQ YP_782205.1 3683651 D 316055 CDS YP_782206.1 115525295 4360979 3684831..3685916 1 NC_008435.1 PFAM: permease YjgP/YjgQ family protein; KEGG: rpc:RPC_2312 permease YjgP/YjgQ; permease YjgP/YjgQ 3685916 4360979 RPE_3293 Rhodopseudomonas palustris BisA53 permease YjgP/YjgQ YP_782206.1 3684831 D 316055 CDS YP_782207.1 115525296 4360980 3685916..3688399 1 NC_008435.1 PFAM: Organic solvent tolerance protein; KEGG: rpc:RPC_2311 organic solvent tolerance protein; organic solvent tolerance protein 3688399 4360980 RPE_3294 Rhodopseudomonas palustris BisA53 organic solvent tolerance protein YP_782207.1 3685916 D 316055 CDS YP_782208.1 115525297 4360981 3688475..3689392 1 NC_008435.1 KEGG: rpc:RPC_2310 hypothetical protein; hypothetical protein 3689392 4360981 RPE_3295 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782208.1 3688475 D 316055 CDS YP_782209.1 115525298 4360982 3689483..3690496 1 NC_008435.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 3690496 pdxA 4360982 pdxA Rhodopseudomonas palustris BisA53 4-hydroxythreonine-4-phosphate dehydrogenase YP_782209.1 3689483 D 316055 CDS YP_782210.1 115525299 4360983 3690493..3691356 1 NC_008435.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 3691356 ksgA 4360983 ksgA Rhodopseudomonas palustris BisA53 dimethyladenosine transferase YP_782210.1 3690493 D 316055 CDS YP_782211.1 115525300 4360984 3691371..3692426 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_2307 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 3692426 4360984 RPE_3298 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_782211.1 3691371 D 316055 CDS YP_782212.1 115525301 4360985 3692596..3693504 1 NC_008435.1 KEGG: rpc:RPC_2306 hypothetical protein; hypothetical protein 3693504 4360985 RPE_3299 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782212.1 3692596 D 316055 CDS YP_782213.1 115525302 4360986 complement(3693537..3694553) 1 NC_008435.1 KEGG: rpa:RPA1461 hypothetical protein; hypothetical protein 3694553 4360986 RPE_3300 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782213.1 3693537 R 316055 CDS YP_782214.1 115525303 4360987 complement(3694596..3695258) 1 NC_008435.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 3695258 gmk 4360987 gmk Rhodopseudomonas palustris BisA53 guanylate kinase YP_782214.1 3694596 R 316055 CDS YP_782215.1 115525304 4360988 complement(3695261..3696148) 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: rpc:RPC_2304 conserved hypothetical protein 255; hypothetical protein 3696148 4360988 RPE_3302 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782215.1 3695261 R 316055 CDS YP_782216.1 115525305 4360989 complement(3696247..3697503) 1 NC_008435.1 PFAM: aminodeoxychorismate lyase; KEGG: rpc:RPC_2303 aminodeoxychorismate lyase; aminodeoxychorismate lyase 3697503 4360989 RPE_3303 Rhodopseudomonas palustris BisA53 aminodeoxychorismate lyase YP_782216.1 3696247 R 316055 CDS YP_782217.1 115525306 4360990 complement(3697679..3698944) 1 NC_008435.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 3698944 4360990 RPE_3304 Rhodopseudomonas palustris BisA53 3-oxoacyl-(acyl carrier protein) synthase II YP_782217.1 3697679 R 316055 CDS YP_782218.1 115525307 4360991 complement(3699041..3699280) 1 NC_008435.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 3699280 acpP 4360991 acpP Rhodopseudomonas palustris BisA53 acyl carrier protein YP_782218.1 3699041 R 316055 CDS YP_782219.1 115525308 4360992 complement(3699574..3700311) 1 NC_008435.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_2300 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 3700311 4360992 RPE_3306 Rhodopseudomonas palustris BisA53 3-oxoacyl-(acyl-carrier-protein) reductase YP_782219.1 3699574 R 316055 CDS YP_782220.1 115525309 4360993 complement(3700341..3701300) 1 NC_008435.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: bja:blr4082 malonyl-CoA:acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 3701300 4360993 RPE_3307 Rhodopseudomonas palustris BisA53 malonyl CoA-acyl carrier protein transacylase YP_782220.1 3700341 R 316055 CDS YP_782221.1 115525310 4360994 3701617..3702903 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpa:RPA3076 putative diguanylate cyclase (GGDEF); diguanylate cyclase 3702903 4360994 RPE_3308 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_782221.1 3701617 D 316055 CDS YP_782222.1 115525311 4360995 3703150..3703623 1 NC_008435.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 3703623 rpsF 4360995 rpsF Rhodopseudomonas palustris BisA53 30S ribosomal protein S6 YP_782222.1 3703150 D 316055 CDS YP_782223.1 115525312 4360996 3703629..3703868 1 NC_008435.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 3703868 rpsR 4360996 rpsR Rhodopseudomonas palustris BisA53 30S ribosomal protein S18 YP_782223.1 3703629 D 316055 CDS YP_782224.1 115525313 4360997 complement(3704124..3705053) 1 NC_008435.1 KEGG: rpd:RPD_3944 hypothetical protein; hypothetical protein 3705053 4360997 RPE_3311 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782224.1 3704124 R 316055 CDS YP_782225.1 115525314 4360998 complement(3705484..3706347) 1 NC_008435.1 KEGG: rpd:RPD_2164 hypothetical protein; hypothetical protein 3706347 4360998 RPE_3312 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782225.1 3705484 R 316055 CDS YP_782226.1 115525315 4360999 complement(3706349..3706618) 1 NC_008435.1 KEGG: rpd:RPD_2163 hypothetical protein; hypothetical protein 3706618 4360999 RPE_3313 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782226.1 3706349 R 316055 CDS YP_782227.1 115525316 4361000 3707382..3708371 1 NC_008435.1 KEGG: rpc:RPC_2294 hypothetical protein; hypothetical protein 3708371 4361000 RPE_3314 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782227.1 3707382 D 316055 CDS YP_782228.1 115525317 4361001 3708392..3708976 1 NC_008435.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 3708976 rplI 4361001 rplI Rhodopseudomonas palustris BisA53 50S ribosomal protein L9 YP_782228.1 3708392 D 316055 CDS YP_782229.1 115525318 4361002 complement(3709124..3710443) 1 NC_008435.1 KEGG: rpd:RPD_2989 hypothetical protein; hypothetical protein 3710443 4361002 RPE_3316 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782229.1 3709124 R 316055 CDS YP_782230.1 115525319 4361003 3711291..3712787 1 NC_008435.1 unwinds double stranded DNA; replicative DNA helicase 3712787 4361003 RPE_3317 Rhodopseudomonas palustris BisA53 replicative DNA helicase YP_782230.1 3711291 D 316055 CDS YP_782231.1 115525320 4361004 3713053..3716892 1 NC_008435.1 KEGG: rru:Rru_A0502 hypothetical protein; hypothetical protein 3716892 4361004 RPE_3318 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782231.1 3713053 D 316055 CDS YP_782232.1 115525321 4361005 3717013..3717270 1 NC_008435.1 KEGG: rpa:RPA3084 replicative DNA helicase (dnaB); replicative DNA helicase-like protein 3717270 4361005 RPE_3319 Rhodopseudomonas palustris BisA53 replicative DNA helicase-like protein YP_782232.1 3717013 D 316055 CDS YP_782233.1 115525322 4361006 3717815..3719032 1 NC_008435.1 PFAM: protein of unknown function DUF214; KEGG: dde:Dde_0827 ABC transporter, permease protein, putative; hypothetical protein 3719032 4361006 RPE_3320 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782233.1 3717815 D 316055 CDS YP_782234.1 115525323 4361007 3719029..3719754 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvu:DVUA0022 ABC transporter, ATP-binding protein; ABC transporter-like protein 3719754 4361007 RPE_3321 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782234.1 3719029 D 316055 CDS YP_782235.1 115525324 4361008 3719754..3720806 1 NC_008435.1 PFAM: secretion protein HlyD family protein; KEGG: aba:Acid345_4021 secretion protein HlyD; secretion protein HlyD family protein 3720806 4361008 RPE_3322 Rhodopseudomonas palustris BisA53 secretion protein HlyD family protein YP_782235.1 3719754 D 316055 CDS YP_782236.1 115525325 4361009 complement(3720831..3721943) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpa:RPA2367 two component sensor histidine kinase, possible AdeS; periplasmic sensor signal transduction histidine kinase 3721943 4361009 RPE_3323 Rhodopseudomonas palustris BisA53 periplasmic sensor signal transduction histidine kinase YP_782236.1 3720831 R 316055 CDS YP_782237.1 115525326 4361010 complement(3721940..3722626) 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_2735 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3722626 4361010 RPE_3324 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_782237.1 3721940 R 316055 CDS YP_782238.1 115525327 4361011 complement(3722699..3723022) 1 NC_008435.1 KEGG: ret:RHE_CH02686 hypothetical protein; hypothetical protein 3723022 4361011 RPE_3325 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782238.1 3722699 R 316055 CDS YP_782239.1 115525328 4361012 3723322..3724551 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpa:RPA2371 putative RND multidrug efflux membrane fusion protein MexA precursor; RND family efflux transporter MFP subunit 3724551 4361012 RPE_3326 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_782239.1 3723322 D 316055 CDS YP_782240.1 115525329 4361013 3724548..3727715 1 NC_008435.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpa:RPA2372 RND multidrug efflux transporter MexB; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3727715 4361013 RPE_3327 Rhodopseudomonas palustris BisA53 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_782240.1 3724548 D 316055 CDS YP_782241.1 115525330 4361014 3727726..3728115 1 NC_008435.1 KEGG: rpa:RPA2374 hypothetical protein; hypothetical protein 3728115 4361014 RPE_3328 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782241.1 3727726 D 316055 CDS YP_782242.1 115525331 4361016 3728437..3730044 1 NC_008435.1 KEGG: rpa:RPA2375 hypothetical protein; hypothetical protein 3730044 4361016 RPE_3330 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782242.1 3728437 D 316055 CDS YP_782243.1 115525332 4361017 3730122..3730217 1 NC_008435.1 KEGG: rpa:RPA2374 hypothetical protein; hypothetical protein 3730217 4361017 RPE_3331 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782243.1 3730122 D 316055 CDS YP_782244.1 115525333 4361018 3730265..3730822 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA2988 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3730822 4361018 RPE_3332 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_782244.1 3730265 D 316055 CDS YP_782245.1 115525334 4361019 3731055..3732104 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpb:RPB_2521 diguanylate cyclase; diguanylate cyclase 3732104 4361019 RPE_3333 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_782245.1 3731055 D 316055 CDS YP_782246.1 115525335 4361020 3732447..3733661 1 NC_008435.1 KEGG: rpc:RPC_2289 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 3733661 4361020 RPE_3334 Rhodopseudomonas palustris BisA53 alanine racemase YP_782246.1 3732447 D 316055 CDS YP_782247.1 115525336 4361021 complement(3733672..3734160) 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mlr3150 hypothetical protein; N-acetyltransferase GCN5 3734160 4361021 RPE_3335 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_782247.1 3733672 R 316055 CDS YP_782248.1 115525337 4361022 complement(3734237..3734635) 1 NC_008435.1 KEGG: rpd:RPD_2993 hypothetical protein; hypothetical protein 3734635 4361022 RPE_3336 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782248.1 3734237 R 316055 CDS YP_782249.1 115525338 4361023 3735404..3735916 1 NC_008435.1 KEGG: jan:Jann_2415 hypothetical protein; hypothetical protein 3735916 4361023 RPE_3337 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782249.1 3735404 D 316055 CDS YP_782250.1 115525339 4361024 3736048..3737517 1 NC_008435.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 3737517 4361024 RPE_3338 Rhodopseudomonas palustris BisA53 DNA repair protein RadA YP_782250.1 3736048 D 316055 CDS YP_782251.1 115525340 4361025 3737722..3738348 1 NC_008435.1 PFAM: Colicin V production protein; KEGG: rpc:RPC_2283 colicin V production protein; colicin V production protein 3738348 4361025 RPE_3339 Rhodopseudomonas palustris BisA53 colicin V production protein YP_782251.1 3737722 D 316055 CDS YP_782252.1 115525341 4361026 3738371..3739861 1 NC_008435.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 3739861 4361026 RPE_3340 Rhodopseudomonas palustris BisA53 amidophosphoribosyltransferase YP_782252.1 3738371 D 316055 CDS YP_782253.1 115525342 4361027 3739997..3740737 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_2281 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3740737 4361027 RPE_3341 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782253.1 3739997 D 316055 CDS YP_782254.1 115525343 4361028 3740972..3741373 1 NC_008435.1 KEGG: rpd:RPD_1740 hypothetical protein; hypothetical protein 3741373 4361028 RPE_3342 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782254.1 3740972 D 316055 CDS YP_782255.1 115525344 4361029 3741884..3742192 1 NC_008435.1 KEGG: rpd:RPD_1256 hypothetical protein; hypothetical protein 3742192 4361029 RPE_3343 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782255.1 3741884 D 316055 CDS YP_782256.1 115525345 4361030 complement(3742208..3743500) 1 NC_008435.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rpc:RPC_2280 major facilitator superfamily MFS_1; major facilitator transporter 3743500 4361030 RPE_3344 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_782256.1 3742208 R 316055 CDS YP_782257.1 115525346 4361031 complement(3743497..3744879) 1 NC_008435.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3744879 engA 4361031 engA Rhodopseudomonas palustris BisA53 GTP-binding protein EngA YP_782257.1 3743497 R 316055 CDS YP_782258.1 115525347 4361032 complement(3744942..3745466) 1 NC_008435.1 KEGG: rpc:RPC_2278 hypothetical protein; hypothetical protein 3745466 4361032 RPE_3346 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782258.1 3744942 R 316055 CDS YP_782259.1 115525348 4361033 complement(3745550..3746203) 1 NC_008435.1 KEGG: rpc:RPC_2277 hypothetical protein; hypothetical protein 3746203 4361033 RPE_3347 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782259.1 3745550 R 316055 CDS YP_782260.1 115525349 4361034 complement(3746387..3747208) 1 NC_008435.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3747208 panB 4361034 panB Rhodopseudomonas palustris BisA53 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_782260.1 3746387 R 316055 CDS YP_782261.1 115525350 4361035 complement(3747212..3747796) 1 NC_008435.1 PFAM: NnrUfamily protein; KEGG: rpc:RPC_2275 NnrU; NnrU family protein 3747796 4361035 RPE_3349 Rhodopseudomonas palustris BisA53 NnrU family protein YP_782261.1 3747212 R 316055 CDS YP_782262.1 115525351 4361036 3747908..3748900 1 NC_008435.1 PFAM: Uncharacterized protein UPF0065; KEGG: rpd:RPD_3010 twin-arginine translocation pathway signal; hypothetical protein 3748900 4361036 RPE_3350 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782262.1 3747908 D 316055 CDS YP_782263.1 115525352 4361037 complement(3748971..3749420) 1 NC_008435.1 KEGG: rpc:RPC_2273 hypothetical protein; hypothetical protein 3749420 4361037 RPE_3351 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782263.1 3748971 R 316055 CDS YP_782264.1 115525353 4361038 complement(3749586..3749852) 1 NC_008435.1 KEGG: rpc:RPC_2272 hypothetical protein; hypothetical protein 3749852 4361038 RPE_3352 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782264.1 3749586 R 316055 CDS YP_782265.1 115525354 4361039 complement(3750064..3750480) 1 NC_008435.1 hypothetical protein 3750480 4361039 RPE_3353 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782265.1 3750064 R 316055 CDS YP_782266.1 115525355 4361040 complement(3750613..3750750) 1 NC_008435.1 KEGG: rpb:RPB_2441 hypothetical protein; hypothetical protein 3750750 4361040 RPE_3354 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782266.1 3750613 R 316055 CDS YP_782267.1 115525356 4361041 complement(3751026..3751298) 1 NC_008435.1 hypothetical protein 3751298 4361041 RPE_3355 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782267.1 3751026 R 316055 CDS YP_782268.1 115525357 4361042 complement(3751314..3752798) 1 NC_008435.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 3752798 gatB 4361042 gatB Rhodopseudomonas palustris BisA53 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_782268.1 3751314 R 316055 CDS YP_782269.1 115525358 4361043 complement(3752897..3754282) 1 NC_008435.1 PFAM: Patatin; KEGG: rpc:RPC_2266 patatin; patatin 3754282 4361043 RPE_3357 Rhodopseudomonas palustris BisA53 patatin YP_782269.1 3752897 R 316055 CDS YP_782270.1 115525359 4361044 complement(3754447..3755925) 1 NC_008435.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 3755925 gatA 4361044 gatA Rhodopseudomonas palustris BisA53 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_782270.1 3754447 R 316055 CDS YP_782271.1 115525360 4361045 3756106..3756387 1 NC_008435.1 KEGG: rpc:RPC_2263 hypothetical protein; hypothetical protein 3756387 4361045 RPE_3359 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782271.1 3756106 D 316055 CDS YP_782272.1 115525361 4361046 3756431..3756628 1 NC_008435.1 KEGG: rpc:RPC_2262 hypothetical protein; hypothetical protein 3756628 4361046 RPE_3360 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782272.1 3756431 D 316055 CDS YP_782273.1 115525362 4361047 complement(3756654..3756860) 1 NC_008435.1 KEGG: rpb:RPB_2435 hypothetical protein; hypothetical protein 3756860 4361047 RPE_3361 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782273.1 3756654 R 316055 CDS YP_782274.1 115525363 4361048 complement(3756881..3757168) 1 NC_008435.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 3757168 gatC 4361048 gatC Rhodopseudomonas palustris BisA53 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_782274.1 3756881 R 316055 CDS YP_782275.1 115525364 4361049 complement(3757241..3758320) 1 NC_008435.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: rpa:RPA3112 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 3758320 4361049 RPE_3363 Rhodopseudomonas palustris BisA53 2-nitropropane dioxygenase YP_782275.1 3757241 R 316055 CDS YP_782276.1 115525365 4361050 complement(3758413..3758637) 1 NC_008435.1 KEGG: rpc:RPC_2258 hypothetical protein; hypothetical protein 3758637 4361050 RPE_3364 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782276.1 3758413 R 316055 CDS YP_782277.1 115525366 4361051 3758867..3759802 1 NC_008435.1 PFAM: cyclase family protein; KEGG: rpd:RPD_3020 putative cyclase; cyclase family protein 3759802 4361051 RPE_3365 Rhodopseudomonas palustris BisA53 cyclase family protein YP_782277.1 3758867 D 316055 CDS YP_782278.1 115525367 4361052 complement(3759839..3760456) 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_2257 transcriptional regulator, TetR family; TetR family transcriptional regulator 3760456 4361052 RPE_3366 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_782278.1 3759839 R 316055 CDS YP_782279.1 115525368 4361053 complement(3760523..3762502) 1 NC_008435.1 in group A Streptococci this protein was found to cross react with anti myosin antibodies and may play a role in rheumatic fever; myosin-cross-reactive antigen 3762502 4361053 RPE_3367 Rhodopseudomonas palustris BisA53 myosin-cross-reactive antigen YP_782279.1 3760523 R 316055 CDS YP_782280.1 115525369 4361054 3762797..3763288 1 NC_008435.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 3763288 4361054 RPE_3368 Rhodopseudomonas palustris BisA53 Holliday junction resolvase-like protein YP_782280.1 3762797 D 316055 CDS YP_782281.1 115525370 4361055 3763292..3764218 1 NC_008435.1 PFAM: Auxin Efflux Carrier; KEGG: rpc:RPC_2254 auxin efflux carrier; auxin efflux carrier 3764218 4361055 RPE_3369 Rhodopseudomonas palustris BisA53 auxin efflux carrier YP_782281.1 3763292 D 316055 CDS YP_782282.1 115525371 4361056 complement(3764224..3764907) 1 NC_008435.1 PFAM: cyclic nucleotide-binding; KEGG: bja:bll2244 probable cAMP-regulatory protein; cyclic nucleotide-binding protein 3764907 4361056 RPE_3370 Rhodopseudomonas palustris BisA53 cyclic nucleotide-binding protein YP_782282.1 3764224 R 316055 CDS YP_782283.1 115525372 4361057 complement(3765452..3766135) 1 NC_008435.1 PFAM: cyclic nucleotide-binding; KEGG: bja:bll2244 probable cAMP-regulatory protein; cyclic nucleotide-binding protein 3766135 4361057 RPE_3371 Rhodopseudomonas palustris BisA53 cyclic nucleotide-binding protein YP_782283.1 3765452 R 316055 CDS YP_782284.1 115525373 4361058 complement(3766411..3767181) 1 NC_008435.1 PFAM: peptidase M15D, vanX D-ala-D-ala dipeptidase; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: rpd:RPD_3026 peptidase M15D, VanX D-ala-D-ala dipeptidase; peptidase M15D, vanX D-ala-D-ala dipeptidase 3767181 4361058 RPE_3372 Rhodopseudomonas palustris BisA53 peptidase M15D, vanX D-ala-D-ala dipeptidase YP_782284.1 3766411 R 316055 CDS YP_782285.1 115525374 4361059 3767286..3768239 1 NC_008435.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 3768239 pyrB 4361059 pyrB Rhodopseudomonas palustris BisA53 aspartate carbamoyltransferase catalytic subunit YP_782285.1 3767286 D 316055 CDS YP_782286.1 115525375 4361060 3768244..3769545 1 NC_008435.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 3769545 4361060 RPE_3374 Rhodopseudomonas palustris BisA53 dihydroorotase YP_782286.1 3768244 D 316055 CDS YP_782287.1 115525376 4361061 3769583..3770176 1 NC_008435.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 3770176 4361061 RPE_3375 Rhodopseudomonas palustris BisA53 putative glycerol-3-phosphate acyltransferase PlsY YP_782287.1 3769583 D 316055 CDS YP_782288.1 115525377 4361062 complement(3770194..3770703) 1 NC_008435.1 hypothetical protein 3770703 4361062 RPE_3376 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782288.1 3770194 R 316055 CDS YP_782289.1 115525378 4361063 3771022..3772140 1 NC_008435.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rpc:RPC_2244 DNA processing protein DprA, putative; DNA processing protein DprA 3772140 4361063 RPE_3377 Rhodopseudomonas palustris BisA53 DNA processing protein DprA YP_782289.1 3771022 D 316055 CDS YP_782290.1 115525379 4361064 complement(3772143..3772394) 1 NC_008435.1 KEGG: rpc:RPC_2240 hypothetical protein; hypothetical protein 3772394 4361064 RPE_3378 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782290.1 3772143 R 316055 CDS YP_782291.1 115525380 4361065 3772566..3775400 1 NC_008435.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 3775400 4361065 RPE_3379 Rhodopseudomonas palustris BisA53 DNA topoisomerase I YP_782291.1 3772566 D 316055 CDS YP_782292.1 115525381 4361066 3776486..3778894 1 NC_008435.1 KEGG: rpc:RPC_2238 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; ribonuclease R 3778894 4361066 RPE_3380 Rhodopseudomonas palustris BisA53 ribonuclease R YP_782292.1 3776486 D 316055 CDS YP_782293.1 115525382 4361067 3778917..3779366 1 NC_008435.1 PFAM: protein of unknown function DUF983; KEGG: rpc:RPC_2237 protein of unknown function DUF983; hypothetical protein 3779366 4361067 RPE_3381 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782293.1 3778917 D 316055 CDS YP_782294.1 115525383 4361068 3779400..3780143 1 NC_008435.1 PFAM: NUDIX hydrolase; KEGG: rpa:RPA3127 NUDIX hydrolase; NUDIX hydrolase 3780143 4361068 RPE_3382 Rhodopseudomonas palustris BisA53 NUDIX hydrolase YP_782294.1 3779400 D 316055 CDS YP_782295.1 115525384 4361069 3780261..3780428 1 NC_008435.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 3780428 rpmG 4361069 rpmG Rhodopseudomonas palustris BisA53 50S ribosomal protein L33 YP_782295.1 3780261 D 316055 CDS YP_782296.1 115525385 4361070 3780961..3781698 1 NC_008435.1 TIGRFAM: methyltransferase FkbM family; KEGG: nmu:Nmul_A1173 methyltransferase FkbM; FkbM family methyltransferase 3781698 4361070 RPE_3384 Rhodopseudomonas palustris BisA53 FkbM family methyltransferase YP_782296.1 3780961 D 316055 CDS YP_782297.1 115525386 4361071 complement(3783389..3784762) 1 NC_008435.1 involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; response regulator PleD 3784762 pleD 4361071 pleD Rhodopseudomonas palustris BisA53 response regulator PleD YP_782297.1 3783389 R 316055 CDS YP_782298.1 115525387 4361072 complement(3784772..3785137) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_3309 response regulator receiver domain protein (CheY-like); response regulator receiver protein 3785137 4361072 RPE_3386 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_782298.1 3784772 R 316055 CDS YP_782299.1 115525388 4361073 3785265..3785564 1 NC_008435.1 KEGG: rpc:RPC_3310 hypothetical protein; hypothetical protein 3785564 4361073 RPE_3387 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782299.1 3785265 D 316055 CDS YP_782300.1 115525389 4361074 3785561..3786859 1 NC_008435.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 3786859 4361074 RPE_3388 Rhodopseudomonas palustris BisA53 DNA polymerase IV YP_782300.1 3785561 D 316055 CDS YP_782301.1 115525390 4361075 3787043..3787327 1 NC_008435.1 hypothetical protein 3787327 4361075 RPE_3389 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782301.1 3787043 D 316055 CDS YP_782302.1 115525391 4361076 complement(3787399..3788268) 1 NC_008435.1 KEGG: rpc:RPC_3312 hypothetical protein; hypothetical protein 3788268 4361076 RPE_3390 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782302.1 3787399 R 316055 CDS YP_782303.1 115525392 4361077 3788446..3788913 1 NC_008435.1 PFAM: Endoribonuclease L-PSP; KEGG: nha:Nham_2448 endoribonuclease L-PSP; endoribonuclease L-PSP 3788913 4361077 RPE_3391 Rhodopseudomonas palustris BisA53 endoribonuclease L-PSP YP_782303.1 3788446 D 316055 CDS YP_782304.1 115525393 4361078 3788916..3789671 1 NC_008435.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rpc:RPC_3314 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3789671 4361078 RPE_3392 Rhodopseudomonas palustris BisA53 glycerophosphoryl diester phosphodiesterase YP_782304.1 3788916 D 316055 CDS YP_782305.1 115525394 4361079 3789759..3790988 1 NC_008435.1 PFAM: protein of unknown function DUF482; KEGG: rpc:RPC_3315 protein of unknown function DUF482; hypothetical protein 3790988 4361079 RPE_3393 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782305.1 3789759 D 316055 CDS YP_782306.1 115525395 4361080 3791040..3791468 1 NC_008435.1 PFAM: histidine triad (HIT) protein; KEGG: rpc:RPC_3316 histidine triad (HIT) protein; histidine triad (HIT) protein 3791468 4361080 RPE_3394 Rhodopseudomonas palustris BisA53 histidine triad (HIT) protein YP_782306.1 3791040 D 316055 CDS YP_782307.1 115525396 4361081 complement(3791736..3792200) 1 NC_008435.1 PFAM: protein of unknown function UPF0066; KEGG: rpd:RPD_3047 protein of unknown function UPF0066; hypothetical protein 3792200 4361081 RPE_3395 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782307.1 3791736 R 316055 CDS YP_782308.1 115525397 4361082 complement(3792255..3792599) 1 NC_008435.1 PFAM: branched-chain amino acid transport; KEGG: rpc:RPC_3318 hypothetical protein; hypothetical protein 3792599 4361082 RPE_3396 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782308.1 3792255 R 316055 CDS YP_782309.1 115525398 4361083 complement(3792596..3793333) 1 NC_008435.1 PFAM: AzlC family protein; KEGG: rpc:RPC_3319 AzlC-like; AzlC family protein 3793333 4361083 RPE_3397 Rhodopseudomonas palustris BisA53 AzlC family protein YP_782309.1 3792596 R 316055 CDS YP_782310.1 115525399 4361084 3793490..3793849 1 NC_008435.1 PFAM: type IV pilus assembly PilZ; KEGG: rpb:RPB_2400 hypothetical protein; type IV pilus assembly PilZ 3793849 4361084 RPE_3398 Rhodopseudomonas palustris BisA53 type IV pilus assembly PilZ YP_782310.1 3793490 D 316055 CDS YP_782311.1 115525400 4361085 complement(3793856..3794884) 1 NC_008435.1 PFAM: Sporulation domain protein; Lytic transglycosylase, catalytic; KEGG: rpc:RPC_3321 lytic transglycosylase, catalytic; lytic transglycosylase 3794884 4361085 RPE_3399 Rhodopseudomonas palustris BisA53 lytic transglycosylase YP_782311.1 3793856 R 316055 CDS YP_782312.1 115525401 4361086 3795057..3796187 1 NC_008435.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 3796187 4361086 RPE_3400 Rhodopseudomonas palustris BisA53 8-amino-7-oxononanoate synthase YP_782312.1 3795057 D 316055 CDS YP_782313.1 115525402 4361087 3796184..3796825 1 NC_008435.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 3796825 bioD 4361087 bioD Rhodopseudomonas palustris BisA53 dithiobiotin synthetase YP_782313.1 3796184 D 316055 CDS YP_782314.1 115525403 4361088 3796822..3798081 1 NC_008435.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3798081 4361088 RPE_3402 Rhodopseudomonas palustris BisA53 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_782314.1 3796822 D 316055 CDS YP_782315.1 115525404 4361089 3798694..3800157 1 NC_008435.1 KEGG: rpc:RPC_3323 hypothetical protein; hypothetical protein 3800157 4361089 RPE_3403 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782315.1 3798694 D 316055 CDS YP_782316.1 115525405 4361090 complement(3800409..3802823) 1 NC_008435.1 KEGG: rpb:RPB_2396 AAA_5 ATPase; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 3802823 4361090 RPE_3404 Rhodopseudomonas palustris BisA53 ATP-dependent Clp protease ATP-binding protein ClpA YP_782316.1 3800409 R 316055 CDS YP_782317.1 115525406 4361091 complement(3803148..3803477) 1 NC_008435.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: rpc:RPC_3325 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 3803477 4361091 RPE_3405 Rhodopseudomonas palustris BisA53 ATP-dependent Clp protease adaptor protein ClpS YP_782317.1 3803148 R 316055 CDS YP_782318.1 115525407 4361092 3804011..3805753 1 NC_008435.1 KEGG: nwi:Nwi_1697 hypothetical protein; hypothetical protein 3805753 4361092 RPE_3406 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782318.1 3804011 D 316055 CDS YP_782319.1 115525408 4361093 3806140..3807894 1 NC_008435.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: rpc:RPC_3328 serine-type D-Ala-D-Ala carboxypeptidase; Serine-type D-Ala-D-Ala carboxypeptidase 3807894 4361093 RPE_3407 Rhodopseudomonas palustris BisA53 Serine-type D-Ala-D-Ala carboxypeptidase YP_782319.1 3806140 D 316055 CDS YP_782320.1 115525409 4361094 complement(3808141..3808875) 1 NC_008435.1 PFAM: heat shock protein DnaJ domain protein; KEGG: rpc:RPC_3329 heat shock protein DnaJ-like; heat shock protein DnaJ domain-containing protein 3808875 4361094 RPE_3408 Rhodopseudomonas palustris BisA53 heat shock protein DnaJ domain-containing protein YP_782320.1 3808141 R 316055 CDS YP_782321.1 115525410 4361095 complement(3808933..3809685) 1 NC_008435.1 KEGG: rpd:RPD_3060 hypothetical protein; hypothetical protein 3809685 4361095 RPE_3409 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782321.1 3808933 R 316055 CDS YP_782322.1 115525411 4361096 complement(3809762..3810358) 1 NC_008435.1 TIGRFAM: mobile mystery protein B; PFAM: filamentation induced by cAMP protein Fic; KEGG: atc:AGR_pTi_bx97 hypothetical protein; mobile mystery protein B 3810358 4361096 RPE_3410 Rhodopseudomonas palustris BisA53 mobile mystery protein B YP_782322.1 3809762 R 316055 CDS YP_782323.1 115525412 4361097 complement(3810355..3810816) 1 NC_008435.1 TIGRFAM: mobile mystery protein A; PFAM: helix-turn-helix domain protein; KEGG: atc:AGR_pTi_183 DNA-binding protein; XRE family transcriptional regulator 3810816 4361097 RPE_3411 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_782323.1 3810355 R 316055 CDS YP_782324.1 115525413 4361098 complement(3810933..3811856) 1 NC_008435.1 KEGG: bja:bll5161 hypothetical protein; hypothetical protein 3811856 4361098 RPE_3412 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782324.1 3810933 R 316055 CDS YP_782325.1 115525414 4361099 3812016..3812888 1 NC_008435.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 3812888 panC 4361099 panC Rhodopseudomonas palustris BisA53 pantoate--beta-alanine ligase YP_782325.1 3812016 D 316055 CDS YP_782326.1 115525415 4361100 complement(3812893..3813333) 1 NC_008435.1 PFAM: Uncharacterised conserved protein UCP032025; KEGG: rpc:RPC_3333 uncharacterised conserved protein UCP032025; hypothetical protein 3813333 4361100 RPE_3414 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782326.1 3812893 R 316055 CDS YP_782327.1 115525416 4361101 complement(3813366..3814397) 1 NC_008435.1 KEGG: rpc:RPC_3334 hypothetical protein; hypothetical protein 3814397 4361101 RPE_3415 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782327.1 3813366 R 316055 CDS YP_782328.1 115525417 4361102 complement(3814543..3814734) 1 NC_008435.1 KEGG: rpd:RPD_3069 hypothetical protein; hypothetical protein 3814734 4361102 RPE_3416 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782328.1 3814543 R 316055 CDS YP_782329.1 115525418 4361103 complement(3814983..3815639) 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rpc:RPC_3336 glutathione S-transferase-like; glutathione S-transferase 3815639 4361103 RPE_3417 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_782329.1 3814983 R 316055 CDS YP_782330.1 115525419 4361104 3815750..3816031 1 NC_008435.1 KEGG: rpd:RPD_3071 hypothetical protein; hypothetical protein 3816031 4361104 RPE_3418 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782330.1 3815750 D 316055 CDS YP_782331.1 115525420 4361105 complement(3816035..3816838) 1 NC_008435.1 PFAM: protein of unknown function DUF218; KEGG: rpc:RPC_3338 protein of unknown function DUF218; hypothetical protein 3816838 4361105 RPE_3419 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782331.1 3816035 R 316055 CDS YP_782332.1 115525421 4361106 complement(3816865..3817683) 1 NC_008435.1 PFAM: aldo/keto reductase; KEGG: rpc:RPC_3339 2,5-didehydrogluconate reductase; 2,5-didehydrogluconate reductase 3817683 4361106 RPE_3420 Rhodopseudomonas palustris BisA53 2,5-didehydrogluconate reductase YP_782332.1 3816865 R 316055 CDS YP_782333.1 115525422 4361107 complement(3817729..3818058) 1 NC_008435.1 SMART: helix-turn-helix domain protein; KEGG: rpb:RPB_2380 transcriptional regulator, XRE family; XRE family transcriptional regulator 3818058 4361107 RPE_3421 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_782333.1 3817729 R 316055 CDS YP_782334.1 115525423 4361108 complement(3818104..3819525) 1 NC_008435.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: rpc:RPC_3340 magnesium transporter; magnesium transporter 3819525 4361108 RPE_3422 Rhodopseudomonas palustris BisA53 magnesium transporter YP_782334.1 3818104 R 316055 CDS YP_782335.1 115525424 4361109 3819688..3820464 1 NC_008435.1 PFAM: polysaccharide deacetylase; KEGG: rpc:RPC_3341 polysaccharide deacetylase; polysaccharide deacetylase 3820464 4361109 RPE_3423 Rhodopseudomonas palustris BisA53 polysaccharide deacetylase YP_782335.1 3819688 D 316055 CDS YP_782336.1 115525425 4361110 3820579..3821877 1 NC_008435.1 PFAM: polysaccharide deacetylase; KEGG: rpc:RPC_3342 polysaccharide deacetylase; polysaccharide deacetylase 3821877 4361110 RPE_3424 Rhodopseudomonas palustris BisA53 polysaccharide deacetylase YP_782336.1 3820579 D 316055 CDS YP_782337.1 115525426 4361111 complement(3821895..3822269) 1 NC_008435.1 KEGG: rpc:RPC_3343 hypothetical protein; hypothetical protein 3822269 4361111 RPE_3425 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782337.1 3821895 R 316055 CDS YP_782338.1 115525427 4361112 complement(3822479..3823090) 1 NC_008435.1 PFAM: protein of unknown function DUF1234; KEGG: rfr:Rfer_2404 protein of unknown function DUF1234; hypothetical protein 3823090 4361112 RPE_3426 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782338.1 3822479 R 316055 CDS YP_782339.1 115525428 4361113 3823803..3824846 1 NC_008435.1 KEGG: rfr:Rfer_2410 citrate lyase ligase; TIGRFAM: cytidyltransferase-related domain; citrate lyase ligase; PFAM: GCN5-related N-acetyltransferase; Citrate lyase ligase, C-terminal domain protein; citrate lyase ligase 3824846 4361113 RPE_3427 Rhodopseudomonas palustris BisA53 citrate lyase ligase YP_782339.1 3823803 D 316055 CDS YP_782340.1 115525429 4361114 3824966..3825259 1 NC_008435.1 acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 3825259 4361114 RPE_3428 Rhodopseudomonas palustris BisA53 citrate lyase subunit gamma YP_782340.1 3824966 D 316055 CDS YP_782341.1 115525430 4361115 3825256..3826128 1 NC_008435.1 KEGG: rfr:Rfer_2408 citrate lyase, beta subunit; TIGRFAM: citrate lyase, beta subunit; PFAM: HpcH/HpaI aldolase; citrate lyase subunit beta 3826128 4361115 RPE_3429 Rhodopseudomonas palustris BisA53 citrate lyase subunit beta YP_782341.1 3825256 D 316055 CDS YP_782342.1 115525431 4361116 3826125..3827663 1 NC_008435.1 KEGG: rfr:Rfer_2407 citrate lyase, alpha subunit; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase, alpha subunit; citrate lyase subunit alpha 3827663 4361116 RPE_3430 Rhodopseudomonas palustris BisA53 citrate lyase subunit alpha YP_782342.1 3826125 D 316055 CDS YP_782343.1 115525432 4361117 3827668..3828213 1 NC_008435.1 PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; KEGG: rfr:Rfer_2406 holo-citrate lyase synthase; Holo-ACP synthase 3828213 4361117 RPE_3431 Rhodopseudomonas palustris BisA53 Holo-ACP synthase YP_782343.1 3827668 D 316055 CDS YP_782344.1 115525433 4361118 3828224..3829102 1 NC_008435.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: rfr:Rfer_2405 triphosphoribosyl-dephospho-CoA synthase; triphosphoribosyl-dephospho-CoA synthase 3829102 4361118 RPE_3432 Rhodopseudomonas palustris BisA53 triphosphoribosyl-dephospho-CoA synthase YP_782344.1 3828224 D 316055 CDS YP_782345.1 115525434 4361119 3829228..3829470 1 NC_008435.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rpc:RPC_3345 prevent-host-death protein; prevent-host-death family protein 3829470 4361119 RPE_3433 Rhodopseudomonas palustris BisA53 prevent-host-death family protein YP_782345.1 3829228 D 316055 CDS YP_782346.1 115525435 4361120 3829476..3829916 1 NC_008435.1 PFAM: PilT protein domain protein; KEGG: rpd:RPD_3079 PilT protein-like; PilT domain-containing protein 3829916 4361120 RPE_3434 Rhodopseudomonas palustris BisA53 PilT domain-containing protein YP_782346.1 3829476 D 316055 CDS YP_782347.1 115525436 4361122 complement(3830140..3830388) 1 NC_008435.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: rpc:RPC_3347 surface presentation of antigens (SpoA) protein; hypothetical protein 3830388 4361122 RPE_3435 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782347.1 3830140 R 316055 CDS YP_782348.1 115525437 4361123 3830446..3831150 1 NC_008435.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 3831150 lipB 4361123 lipB Rhodopseudomonas palustris BisA53 lipoate-protein ligase B YP_782348.1 3830446 D 316055 CDS YP_782349.1 115525438 4361124 complement(3831170..3831460) 1 NC_008435.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 3831460 4361124 RPE_3437 Rhodopseudomonas palustris BisA53 acylphosphatase YP_782349.1 3831170 R 316055 CDS YP_782350.1 115525439 4361125 complement(3831466..3832335) 1 NC_008435.1 KEGG: rpd:RPD_3092 hypothetical protein; hypothetical protein 3832335 4361125 RPE_3438 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782350.1 3831466 R 316055 CDS YP_782351.1 115525440 4361126 complement(3832339..3834351) 1 NC_008435.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: rpc:RPC_3352 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase subunit L 3834351 4361126 RPE_3439 Rhodopseudomonas palustris BisA53 carbamoyl-phosphate synthase subunit L YP_782351.1 3832339 R 316055 CDS YP_782352.1 115525441 4361127 complement(3834721..3835296) 1 NC_008435.1 KEGG: rpc:RPC_3354 hypothetical protein; hypothetical protein 3835296 4361127 RPE_3440 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782352.1 3834721 R 316055 CDS YP_782353.1 115525442 4361128 complement(3835698..3836099) 1 NC_008435.1 KEGG: rpc:RPC_3355 hypothetical protein; hypothetical protein 3836099 4361128 RPE_3441 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782353.1 3835698 R 316055 CDS YP_782354.1 115525443 4361129 3836219..3837670 1 NC_008435.1 PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: rpc:RPC_3356 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photolyase 3837670 4361129 RPE_3442 Rhodopseudomonas palustris BisA53 deoxyribodipyrimidine photolyase YP_782354.1 3836219 D 316055 CDS YP_782355.1 115525444 4361130 3837766..3838104 1 NC_008435.1 KEGG: rpd:RPD_3099 hypothetical protein; hypothetical protein 3838104 4361130 RPE_3443 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782355.1 3837766 D 316055 CDS YP_782356.1 115525445 4361131 complement(3838184..3839068) 1 NC_008435.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpc:RPC_3358 protein of unknown function DUF6, transmembrane; hypothetical protein 3839068 4361131 RPE_3444 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782356.1 3838184 R 316055 CDS YP_782357.1 115525446 4361132 3839416..3840507 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_3360 diguanylate cyclase (GGDEF domain); diguanylate cyclase 3840507 4361132 RPE_3445 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_782357.1 3839416 D 316055 CDS YP_782358.1 115525447 4361133 complement(3840535..3841029) 1 NC_008435.1 KEGG: rpa:RPA3183 hypothetical protein; hypothetical protein 3841029 4361133 RPE_3446 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782358.1 3840535 R 316055 CDS YP_782359.1 115525448 4361135 3841360..3841653 1 NC_008435.1 hypothetical protein 3841653 4361135 RPE_3447 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782359.1 3841360 D 316055 CDS YP_782360.1 115525449 4361136 complement(3841622..3842986) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: bja:blr4803 two-component hybrid sensor and regulator; periplasmic sensor signal transduction histidine kinase 3842986 4361136 RPE_3448 Rhodopseudomonas palustris BisA53 periplasmic sensor signal transduction histidine kinase YP_782360.1 3841622 R 316055 CDS YP_782361.1 115525450 4361137 complement(3842983..3843657) 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:blr4802 two-component response regulator; two component transcriptional regulator 3843657 4361137 RPE_3449 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_782361.1 3842983 R 316055 CDS YP_782362.1 115525451 4361140 complement(3844976..3845845) 1 NC_008435.1 PFAM: metallophosphoesterase; KEGG: bja:bll8164 hypothetical protein; metallophosphoesterase 3845845 4361140 RPE_3452 Rhodopseudomonas palustris BisA53 metallophosphoesterase YP_782362.1 3844976 R 316055 CDS YP_782363.1 115525452 4361141 complement(3846085..3846744) 1 NC_008435.1 KEGG: bja:bll8165 putative alkaline phosphatase protein; putative alkaline phosphatase protein 3846744 4361141 RPE_3453 Rhodopseudomonas palustris BisA53 putative alkaline phosphatase protein YP_782363.1 3846085 R 316055 CDS YP_782364.1 115525453 4361142 complement(3846755..3847330) 1 NC_008435.1 KEGG: bja:bll8166 probable phospholipid N-methyltransferase; putative phospholipid N-methyltransferase 3847330 4361142 RPE_3454 Rhodopseudomonas palustris BisA53 putative phospholipid N-methyltransferase YP_782364.1 3846755 R 316055 CDS YP_782365.1 115525454 4361143 3847658..3848008 1 NC_008435.1 PFAM: response regulator receiver; KEGG: mlo:mll5373 two-component response regulator; response regulator receiver protein 3848008 4361143 RPE_3455 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_782365.1 3847658 D 316055 CDS YP_782366.1 115525455 4361144 complement(3848169..3848546) 1 NC_008435.1 KEGG: rpa:RPA1360 hypothetical protein; hypothetical protein 3848546 4361144 RPE_3456 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782366.1 3848169 R 316055 CDS YP_782367.1 115525456 4361145 complement(3848566..3849354) 1 NC_008435.1 PFAM: Lytic transglycosylase, catalytic; KEGG: rpc:RPC_2909 lytic transglycosylase, catalytic; lytic transglycosylase 3849354 4361145 RPE_3457 Rhodopseudomonas palustris BisA53 lytic transglycosylase YP_782367.1 3848566 R 316055 CDS YP_782368.1 115525457 4361146 complement(3849355..3849846) 1 NC_008435.1 KEGG: rpc:RPC_2910 hypothetical protein; hypothetical protein 3849846 4361146 RPE_3458 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782368.1 3849355 R 316055 CDS YP_782369.1 115525458 4361147 complement(3849895..3850437) 1 NC_008435.1 KEGG: rpc:RPC_2912 hypothetical protein; hypothetical protein 3850437 4361147 RPE_3459 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782369.1 3849895 R 316055 CDS YP_782370.1 115525459 4361148 complement(3850448..3851509) 1 NC_008435.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rpc:RPC_2913 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3851509 4361148 RPE_3460 Rhodopseudomonas palustris BisA53 PpiC-type peptidyl-prolyl cis-trans isomerase YP_782370.1 3850448 R 316055 CDS YP_782371.1 115525460 4361149 complement(3851506..3852105) 1 NC_008435.1 KEGG: rpc:RPC_2914 hypothetical protein; hypothetical protein 3852105 4361149 RPE_3461 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782371.1 3851506 R 316055 CDS YP_782372.1 115525461 4361150 complement(3852108..3853973) 1 NC_008435.1 KEGG: rpc:RPC_2915 hypothetical protein; hypothetical protein 3853973 4361150 RPE_3462 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782372.1 3852108 R 316055 CDS YP_782373.1 115525462 4361151 complement(3854010..3854765) 1 NC_008435.1 KEGG: rpb:RPB_2223 hypothetical protein; hypothetical protein 3854765 4361151 RPE_3463 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782373.1 3854010 R 316055 CDS YP_782374.1 115525463 4361152 complement(3854762..3855259) 1 NC_008435.1 KEGG: rpc:RPC_2918 hypothetical protein; hypothetical protein 3855259 4361152 RPE_3464 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782374.1 3854762 R 316055 CDS YP_782375.1 115525464 4361153 complement(3855267..3855671) 1 NC_008435.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpc:RPC_2919 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3855671 4361153 RPE_3465 Rhodopseudomonas palustris BisA53 biopolymer transport protein ExbD/TolR YP_782375.1 3855267 R 316055 CDS YP_782376.1 115525465 4361154 complement(3855677..3857740) 1 NC_008435.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpc:RPC_2920 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 3857740 4361154 RPE_3466 Rhodopseudomonas palustris BisA53 MotA/TolQ/ExbB proton channel YP_782376.1 3855677 R 316055 CDS YP_782377.1 115525466 4361155 complement(3857740..3859530) 1 NC_008435.1 PFAM: Polypeptide-transport-associated domain protein, ShlB-type; KEGG: rpc:RPC_2921 hemolysin activation/secretion protein; polypeptide-transport-associated domain-containing protein 3859530 4361155 RPE_3467 Rhodopseudomonas palustris BisA53 polypeptide-transport-associated domain-containing protein YP_782377.1 3857740 R 316055 CDS YP_782378.1 115525467 4361156 complement(3859685..3860593) 1 NC_008435.1 PFAM: FecR protein; KEGG: rpc:RPC_2904 putative FecR; putative FecR protein 3860593 4361156 RPE_3468 Rhodopseudomonas palustris BisA53 putative FecR protein YP_782378.1 3859685 R 316055 CDS YP_782379.1 115525468 4361157 3860684..3860947 1 NC_008435.1 hypothetical protein 3860947 4361157 RPE_3469 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782379.1 3860684 D 316055 CDS YP_782380.1 115525469 4361158 complement(3861033..3861575) 1 NC_008435.1 PFAM: sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: rpc:RPC_2905 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 3861575 4361158 RPE_3470 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_782380.1 3861033 R 316055 CDS YP_782381.1 115525470 4361159 complement(3861705..3862448) 1 NC_008435.1 TIGRFAM: TonB family protein; KEGG: rpc:RPC_2906 TonB-like; TonB family protein 3862448 4361159 RPE_3471 Rhodopseudomonas palustris BisA53 TonB family protein YP_782381.1 3861705 R 316055 CDS YP_782382.1 115525471 4361160 complement(3862445..3863122) 1 NC_008435.1 PFAM: Secretin/TonB, short N-terminal domain; KEGG: rpc:RPC_2907 secretin/TonB-like protein; secretin/TonB short N-terminal domain-containing protein 3863122 4361160 RPE_3472 Rhodopseudomonas palustris BisA53 secretin/TonB short N-terminal domain-containing protein YP_782382.1 3862445 R 316055 CDS YP_782383.1 115525472 4361161 complement(3863399..3863875) 1 NC_008435.1 KEGG: rpa:RPA1344 hypothetical protein; hypothetical protein 3863875 4361161 RPE_3473 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782383.1 3863399 R 316055 CDS YP_782384.1 115525473 4361162 complement(3863921..3864679) 1 NC_008435.1 KEGG: rpb:RPB_2209 hypothetical protein; hypothetical protein 3864679 4361162 RPE_3474 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782384.1 3863921 R 316055 CDS YP_782385.1 115525474 4361163 complement(3864865..3878106) 1 NC_008435.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: bur:Bcep18194_B1068 haemagglutinin-like; filamentous hemagglutinin outer membrane protein 3878106 4361163 RPE_3475 Rhodopseudomonas palustris BisA53 filamentous hemagglutinin outer membrane protein YP_782385.1 3864865 R 316055 CDS YP_782386.1 115525475 4361164 complement(3878232..3879224) 1 NC_008435.1 PFAM: FecR protein; KEGG: rpb:RPB_2213 putative FecR; putative FecR protein 3879224 4361164 RPE_3476 Rhodopseudomonas palustris BisA53 putative FecR protein YP_782386.1 3878232 R 316055 CDS YP_782387.1 115525476 4361165 complement(3879327..3879842) 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_2205 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 3879842 4361165 RPE_3477 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_782387.1 3879327 R 316055 CDS YP_782388.1 115525477 4361166 complement(3879839..3880540) 1 NC_008435.1 KEGG: rpb:RPB_3129 secretin/TonB, short-like protein; secretin/TonB, short-like protein 3880540 4361166 RPE_3478 Rhodopseudomonas palustris BisA53 secretin/TonB, short-like protein YP_782388.1 3879839 R 316055 CDS YP_782389.1 115525478 4361167 complement(3880938..3884117) 1 NC_008435.1 PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2796 acriflavin resistance protein; acriflavin resistance protein 3884117 4361167 RPE_3479 Rhodopseudomonas palustris BisA53 acriflavin resistance protein YP_782389.1 3880938 R 316055 CDS YP_782390.1 115525479 4361168 complement(3884131..3885234) 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_2797 secretion protein HlyD; RND family efflux transporter MFP subunit 3885234 4361168 RPE_3480 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_782390.1 3884131 R 316055 CDS YP_782391.1 115525480 4361169 3885386..3886090 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_2798 transcriptional regulator, TetR family; TetR family transcriptional regulator 3886090 4361169 RPE_3481 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_782391.1 3885386 D 316055 CDS YP_782392.1 115525481 4361170 3886285..3886782 1 NC_008435.1 KEGG: rpb:RPB_2247 hypothetical protein; hypothetical protein 3886782 4361170 RPE_3482 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782392.1 3886285 D 316055 CDS YP_782393.1 115525482 4361171 complement(3887057..3889240) 1 NC_008435.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpd:RPD_2482 TonB-dependent receptor; TonB-dependent receptor 3889240 4361171 RPE_3483 Rhodopseudomonas palustris BisA53 TonB-dependent receptor YP_782393.1 3887057 R 316055 CDS YP_782394.1 115525483 4361172 3889323..3889721 1 NC_008435.1 hypothetical protein 3889721 4361172 RPE_3484 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782394.1 3889323 D 316055 CDS YP_782395.1 115525484 4361173 3889827..3890330 1 NC_008435.1 PFAM: protein of unknown function UPF0066; KEGG: rpd:RPD_2481 protein of unknown function UPF0066; hypothetical protein 3890330 4361173 RPE_3485 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782395.1 3889827 D 316055 CDS YP_782396.1 115525485 4361174 3890327..3891379 1 NC_008435.1 PFAM: periplasmic binding protein; KEGG: rpd:RPD_2480 periplasmic binding protein; periplasmic binding protein 3891379 4361174 RPE_3486 Rhodopseudomonas palustris BisA53 periplasmic binding protein YP_782396.1 3890327 D 316055 CDS YP_782397.1 115525486 4361175 3891408..3892403 1 NC_008435.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: rpd:RPD_2479 transport system permease protein; transport system permease 3892403 4361175 RPE_3487 Rhodopseudomonas palustris BisA53 transport system permease YP_782397.1 3891408 D 316055 CDS YP_782398.1 115525487 4361176 3892400..3893185 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2478 ABC transporter related; ABC transporter-like protein 3893185 4361176 RPE_3488 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782398.1 3892400 D 316055 CDS YP_782399.1 115525488 4361177 3893203..3893826 1 NC_008435.1 KEGG: rpd:RPD_2477 hypothetical protein; hypothetical protein 3893826 4361177 RPE_3489 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782399.1 3893203 D 316055 CDS YP_782400.1 115525489 4361178 3893959..3894750 1 NC_008435.1 TIGRFAM: Molybdenum-pterin binding; PFAM: regulatory protein, LysR; TOBE domain protein; KEGG: rpd:RPD_2476 ModE molybdate transport repressor domain; ModE family transcriptional regulator 3894750 4361178 RPE_3490 Rhodopseudomonas palustris BisA53 ModE family transcriptional regulator YP_782400.1 3893959 D 316055 CDS YP_782401.1 115525490 4361179 3895740..3897119 1 NC_008435.1 KEGG: aba:Acid345_1668 hypothetical protein; hypothetical protein 3897119 4361179 RPE_3491 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782401.1 3895740 D 316055 CDS YP_782402.1 115525491 4361180 3897220..3898818 1 NC_008435.1 PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rpc:RPC_4239 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 3898818 4361180 RPE_3492 Rhodopseudomonas palustris BisA53 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_782402.1 3897220 D 316055 CDS YP_782403.1 115525492 4361181 3899131..3900297 1 NC_008435.1 KEGG: ade:Adeh_2645 cellulose biosynthesis (CelD)-like protein; cellulose biosynthesis protein CelD 3900297 4361181 RPE_3493 Rhodopseudomonas palustris BisA53 cellulose biosynthesis protein CelD YP_782403.1 3899131 D 316055 CDS YP_782404.1 115525493 4361182 complement(3900458..3901300) 1 NC_008435.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: ret:RHE_CH01358 putative teichoic acid biosynthesis, UDP-N-acetyl-D-mannosaminuronic acid transferase protein; WecB/TagA/CpsF family glycosyl transferase 3901300 4361182 RPE_3494 Rhodopseudomonas palustris BisA53 WecB/TagA/CpsF family glycosyl transferase YP_782404.1 3900458 R 316055 CDS YP_782405.1 115525494 4361183 complement(3901297..3902268) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: sme:SMb20458 putative dTDP-glucose 4,6-dehydratase protein; NAD-dependent epimerase/dehydratase 3902268 4361183 RPE_3495 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_782405.1 3901297 R 316055 CDS YP_782406.1 115525495 4361184 3902409..3904022 1 NC_008435.1 PFAM: polysaccharide export protein; KEGG: sme:SMb21073 putative OMA family outer membrane saccharide export protein, similar to ExoF; polysaccharide export protein 3904022 4361184 RPE_3496 Rhodopseudomonas palustris BisA53 polysaccharide export protein YP_782406.1 3902409 D 316055 CDS YP_782407.1 115525496 4361185 3904064..3905515 1 NC_008435.1 KEGG: rpc:RPC_4235 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3905515 4361185 RPE_3497 Rhodopseudomonas palustris BisA53 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_782407.1 3904064 D 316055 CDS YP_782408.1 115525497 4361186 3905549..3907249 1 NC_008435.1 PFAM: lipopolysaccharide biosynthesis; KEGG: ccr:CC0164 hypothetical protein; lipopolysaccharide biosynthesis protein 3907249 4361186 RPE_3498 Rhodopseudomonas palustris BisA53 lipopolysaccharide biosynthesis protein YP_782408.1 3905549 D 316055 CDS YP_782409.1 115525498 4361187 3907301..3908542 1 NC_008435.1 KEGG: aba:Acid345_3798 hypothetical protein; hypothetical protein 3908542 4361187 RPE_3499 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782409.1 3907301 D 316055 CDS YP_782410.1 115525499 4361188 3908517..3909050 1 NC_008435.1 hypothetical protein 3909050 4361188 RPE_3500 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782410.1 3908517 D 316055 CDS YP_782411.1 115525500 4361189 3909228..3910595 1 NC_008435.1 KEGG: dge:Dgeo_2667 O-antigen polymerase; O-antigen polymerase 3910595 4361189 RPE_3501 Rhodopseudomonas palustris BisA53 O-antigen polymerase YP_782411.1 3909228 D 316055 CDS YP_782412.1 115525501 4361190 3910767..3912017 1 NC_008435.1 PFAM: acyltransferase 3; KEGG: bur:Bcep18194_B2871 acyltransferase 3; acyltransferase 3 3912017 4361190 RPE_3502 Rhodopseudomonas palustris BisA53 acyltransferase 3 YP_782412.1 3910767 D 316055 CDS YP_782413.1 115525502 4361191 3912609..3913625 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility C-terminal domain; KEGG: aba:Acid345_0895 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3913625 4361191 RPE_3503 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_782413.1 3912609 D 316055 CDS YP_782414.1 115525503 4361192 3913656..3915071 1 NC_008435.1 PFAM: sugar transferase; KEGG: ret:RHE_CH01359 putative sugar transferase involved in lipopolysaccharide synthesis, UDP-galactose-lipid carriertransferase protein; undecaprenyl-phosphate galactose phosphotransferase 3915071 4361192 RPE_3504 Rhodopseudomonas palustris BisA53 undecaprenyl-phosphate galactose phosphotransferase YP_782414.1 3913656 D 316055 CDS YP_782415.1 115525504 4361193 3915110..3916471 1 NC_008435.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: rpc:RPC_4156 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 3916471 4361193 RPE_3505 Rhodopseudomonas palustris BisA53 UDP-glucose 6-dehydrogenase YP_782415.1 3915110 D 316055 CDS YP_782416.1 115525505 4361194 3916643..3917353 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3917353 4361194 RPE_3506 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_782416.1 3916643 D 316055 CDS YP_782417.1 115525506 4361195 3917379..3918134 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3918134 4361195 RPE_3507 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_782417.1 3917379 D 316055 CDS YP_782418.1 115525507 4361196 3918131..3919084 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rru:Rru_A1486 UDP-glucose 4-epimerase; NAD-dependent epimerase/dehydratase 3919084 4361196 RPE_3508 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_782418.1 3918131 D 316055 CDS YP_782419.1 115525508 4361197 3919081..3920355 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: hma:rrnAC1017 LPS glycosyltransferase; group 1 glycosyl transferase 3920355 4361197 RPE_3509 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_782419.1 3919081 D 316055 CDS YP_782420.1 115525509 4361198 3920352..3921164 1 NC_008435.1 PFAM: glycosyl transferase, family 2; KEGG: ade:Adeh_3050 glycosyl transferase, family 2; glycosyl transferase family protein 3921164 4361198 RPE_3510 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_782420.1 3920352 D 316055 CDS YP_782421.1 115525510 4361199 3922120..3923994 1 NC_008435.1 KEGG: nha:Nham_3026 type I secretion system ATPase, PrtD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; type I secretion system ATPase 3923994 4361199 RPE_3511 Rhodopseudomonas palustris BisA53 type I secretion system ATPase YP_782421.1 3922120 D 316055 CDS YP_782422.1 115525511 4361200 3923991..3925292 1 NC_008435.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: nha:Nham_3025 type I secretion membrane fusion protein, HlyD; HlyD family type I secretion membrane fusion protein 3925292 4361200 RPE_3512 Rhodopseudomonas palustris BisA53 HlyD family type I secretion membrane fusion protein YP_782422.1 3923991 D 316055 CDS YP_782423.1 115525512 4361201 3925692..3927146 1 NC_008435.1 PFAM: Hemolysin-type calcium-binding region; KEGG: rpb:RPB_0805 glycerophosphoryl diester phosphodiesterase; hemolysin-type calcium-binding protein 3927146 4361201 RPE_3513 Rhodopseudomonas palustris BisA53 hemolysin-type calcium-binding protein YP_782423.1 3925692 D 316055 CDS YP_782424.1 115525513 4361202 complement(3927415..3928221) 1 NC_008435.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: nha:Nham_3000 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3928221 4361202 RPE_3514 Rhodopseudomonas palustris BisA53 two component LuxR family transcriptional regulator YP_782424.1 3927415 R 316055 CDS YP_782425.1 115525514 4361203 complement(3928401..3928994) 1 NC_008435.1 response regulator receiver protein 3928994 4361203 RPE_3515 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_782425.1 3928401 R 316055 CDS YP_782426.1 115525515 4361204 complement(3930329..3931915) 1 NC_008435.1 PFAM: transposase IS66; KEGG: mag:amb3325 transposase and inactivated derivative; transposase IS66 3931915 4361204 RPE_3516 Rhodopseudomonas palustris BisA53 transposase IS66 YP_782426.1 3930329 R 316055 CDS YP_782427.1 115525516 4361205 complement(3931989..3932336) 1 NC_008435.1 PFAM: IS66 Orf2 family protein; KEGG: mag:amb0402 transposase and inactivated derivative; IS66 Orf2 family protein 3932336 4361205 RPE_3517 Rhodopseudomonas palustris BisA53 IS66 Orf2 family protein YP_782427.1 3931989 R 316055 CDS YP_782428.1 115525517 4361206 complement(3932333..3932731) 1 NC_008435.1 PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr0034 putative transposase; transposase IS3/IS911 family protein 3932731 4361206 RPE_3518 Rhodopseudomonas palustris BisA53 transposase IS3/IS911 family protein YP_782428.1 3932333 R 316055 CDS YP_782429.1 115525518 4361207 complement(3933025..3933354) 1 NC_008435.1 hypothetical protein 3933354 4361207 RPE_3519 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782429.1 3933025 R 316055 CDS YP_782430.1 115525519 4361208 3933574..3933921 1 NC_008435.1 KEGG: rpc:RPC_3376 hypothetical protein; hypothetical protein 3933921 4361208 RPE_3520 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782430.1 3933574 D 316055 CDS YP_782431.1 115525520 4361209 complement(3933946..3935637) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_3378 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3935637 4361209 RPE_3521 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_782431.1 3933946 R 316055 CDS YP_782432.1 115525521 4361210 complement(3935978..3937675) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_3380 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3937675 4361210 RPE_3522 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_782432.1 3935978 R 316055 CDS YP_782433.1 115525522 4361211 3938388..3939374 1 NC_008435.1 SMART: helix-turn-helix- domain containing protein, AraC type; KEGG: rpa:RPA2404 probable transcriptional regulator, AraC family; AraC family transcriptional regulator 3939374 4361211 RPE_3523 Rhodopseudomonas palustris BisA53 AraC family transcriptional regulator YP_782433.1 3938388 D 316055 CDS YP_782434.1 115525523 4361212 complement(3939409..3942093) 1 NC_008435.1 KEGG: rpc:RPC_3384 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 3942093 4361212 RPE_3524 Rhodopseudomonas palustris BisA53 multi-sensor signal transduction histidine kinase YP_782434.1 3939409 R 316055 CDS YP_782435.1 115525524 4361213 complement(3942197..3944377) 1 NC_008435.1 PFAM: Pyrrolo-quinoline quinone; KEGG: rpb:RPB_2355 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 3944377 4361213 RPE_3525 Rhodopseudomonas palustris BisA53 Pyrrolo-quinoline quinone YP_782435.1 3942197 R 316055 CDS YP_782436.1 115525525 4361214 complement(3944527..3945327) 1 NC_008435.1 PFAM: NUDIX hydrolase; KEGG: rpd:RPD_3111 NUDIX hydrolase; NUDIX hydrolase 3945327 4361214 RPE_3526 Rhodopseudomonas palustris BisA53 NUDIX hydrolase YP_782436.1 3944527 R 316055 CDS YP_782437.1 115525526 4361215 complement(3945499..3946449) 1 NC_008435.1 PFAM: dihydrodipicolinate synthetase; KEGG: rpc:RPC_3385 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 3946449 4361215 RPE_3527 Rhodopseudomonas palustris BisA53 dihydrodipicolinate synthetase YP_782437.1 3945499 R 316055 CDS YP_782438.1 115525527 4361216 complement(3946719..3947579) 1 NC_008435.1 PFAM: MaoC domain protein dehydratase; KEGG: rpb:RPB_2352 MaoC-like dehydratase; dehydratase 3947579 4361216 RPE_3528 Rhodopseudomonas palustris BisA53 dehydratase YP_782438.1 3946719 R 316055 CDS YP_782439.1 115525528 4361217 complement(3947820..3951308) 1 NC_008435.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 3951308 4361217 RPE_3529 Rhodopseudomonas palustris BisA53 indolepyruvate ferredoxin oxidoreductase YP_782439.1 3947820 R 316055 CDS YP_782440.1 115525529 4361218 3951649..3952050 1 NC_008435.1 KEGG: rpc:RPC_3388 hypothetical protein; hypothetical protein 3952050 4361218 RPE_3530 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782440.1 3951649 D 316055 CDS YP_782441.1 115525530 4361219 3952271..3952534 1 NC_008435.1 hypothetical protein 3952534 4361219 RPE_3531 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782441.1 3952271 D 316055 CDS YP_782442.1 115525531 4361220 complement(3952600..3953409) 1 NC_008435.1 PFAM: protein of unknown function DUF1295; KEGG: rpd:RPD_3119 protein of unknown function DUF1295; hypothetical protein 3953409 4361220 RPE_3532 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782442.1 3952600 R 316055 CDS YP_782443.1 115525532 4361221 complement(3953525..3954073) 1 NC_008435.1 KEGG: rpd:RPD_3120 hypothetical protein; hypothetical protein 3954073 4361221 RPE_3533 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782443.1 3953525 R 316055 CDS YP_782444.1 115525533 4361222 3954403..3954687 1 NC_008435.1 KEGG: rpa:RPA3197 hypothetical protein; hypothetical protein 3954687 4361222 RPE_3534 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782444.1 3954403 D 316055 CDS YP_782445.1 115525534 4361223 complement(3954814..3956955) 1 NC_008435.1 PFAM: DNA/RNA non-specific endonuclease; Peptidase S7, flavivirus helicase (NS3); KEGG: mac:MA3330 hypothetical protein; DNA/RNA non-specific endonuclease 3956955 4361223 RPE_3535 Rhodopseudomonas palustris BisA53 DNA/RNA non-specific endonuclease YP_782445.1 3954814 R 316055 CDS YP_782446.1 115525535 4361224 3957489..3958730 1 NC_008435.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rru:Rru_A2643 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3958730 4361224 RPE_3536 Rhodopseudomonas palustris BisA53 glycerophosphoryl diester phosphodiesterase YP_782446.1 3957489 D 316055 CDS YP_782447.1 115525536 4361225 3958898..3959128 1 NC_008435.1 KEGG: cvi:CV2871 probable hemagglutinin; hypothetical protein 3959128 4361225 RPE_3537 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782447.1 3958898 D 316055 CDS YP_782448.1 115525537 4361226 3959121..3959459 1 NC_008435.1 hypothetical protein 3959459 4361226 RPE_3538 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782448.1 3959121 D 316055 CDS YP_782449.1 115525538 4361227 3959695..3960126 1 NC_008435.1 hypothetical protein 3960126 4361227 RPE_3539 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782449.1 3959695 D 316055 CDS YP_782450.1 115525539 4361228 complement(3960260..3960535) 1 NC_008435.1 KEGG: rpc:RPC_3396 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 3960535 4361228 RPE_3540 Rhodopseudomonas palustris BisA53 filamentation induced by cAMP protein fic YP_782450.1 3960260 R 316055 CDS YP_782451.1 115525540 4361229 complement(3960558..3962090) 1 NC_008435.1 PFAM: carboxyl transferase; KEGG: rpc:RPC_3397 carboxyl transferase; carboxyl transferase 3962090 4361229 RPE_3541 Rhodopseudomonas palustris BisA53 carboxyl transferase YP_782451.1 3960558 R 316055 CDS YP_782452.1 115525541 4361230 complement(3962410..3963228) 1 NC_008435.1 PFAM: penicillin-binding protein, transpeptidase; KEGG: rpc:RPC_3398 beta-lactamase; Beta-lactamase 3963228 4361230 RPE_3542 Rhodopseudomonas palustris BisA53 Beta-lactamase YP_782452.1 3962410 R 316055 CDS YP_782453.1 115525542 4361231 complement(3963466..3963732) 1 NC_008435.1 KEGG: rpc:RPC_3399 type III secretion protein; type III secretion protein 3963732 4361231 RPE_3543 Rhodopseudomonas palustris BisA53 type III secretion protein YP_782453.1 3963466 R 316055 CDS YP_782454.1 115525543 4361232 complement(3963729..3965465) 1 NC_008435.1 KEGG: rpc:RPC_3400 hypothetical protein; hypothetical protein 3965465 4361232 RPE_3544 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782454.1 3963729 R 316055 CDS YP_782455.1 115525544 4361233 complement(3965523..3966302) 1 NC_008435.1 PFAM: ATP12 ATPase; KEGG: rpc:RPC_3401 ATP12 ATPase; ATP12 ATPase 3966302 4361233 RPE_3545 Rhodopseudomonas palustris BisA53 ATP12 ATPase YP_782455.1 3965523 R 316055 CDS YP_782456.1 115525545 4361234 complement(3966315..3966767) 1 NC_008435.1 KEGG: rpc:RPC_3402 hypothetical protein; hypothetical protein 3966767 4361234 RPE_3546 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782456.1 3966315 R 316055 CDS YP_782457.1 115525546 4361235 complement(3966814..3968190) 1 NC_008435.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rpb:RPB_2335 pseudouridine synthase, RluD; RluA family pseudouridine synthase 3968190 4361235 RPE_3547 Rhodopseudomonas palustris BisA53 RluA family pseudouridine synthase YP_782457.1 3966814 R 316055 CDS YP_782458.1 115525547 4361236 3968910..3970763 1 NC_008435.1 KEGG: gsu:GSU0552 hypothetical protein; hypothetical protein 3970763 4361236 RPE_3548 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782458.1 3968910 D 316055 CDS YP_782459.1 115525548 4361237 3970933..3971157 1 NC_008435.1 KEGG: rpd:RPD_3154 nitroreductase; nitroreductase 3971157 4361237 RPE_3549 Rhodopseudomonas palustris BisA53 nitroreductase YP_782459.1 3970933 D 316055 CDS YP_782460.1 115525549 4361238 3972012..3972689 1 NC_008435.1 PFAM: nitroreductase; KEGG: rpd:RPD_3154 nitroreductase; nitroreductase 3972689 4361238 RPE_3550 Rhodopseudomonas palustris BisA53 nitroreductase YP_782460.1 3972012 D 316055 CDS YP_782461.1 115525550 4361239 complement(3972706..3973314) 1 NC_008435.1 PFAM: BLUF domain protein; KEGG: rpc:RPC_3406 BLUF; BLUF domain-containing protein 3973314 4361239 RPE_3551 Rhodopseudomonas palustris BisA53 BLUF domain-containing protein YP_782461.1 3972706 R 316055 CDS YP_782462.1 115525551 4361240 complement(3973729..3974367) 1 NC_008435.1 KEGG: rpc:RPC_3407 hypothetical protein; hypothetical protein 3974367 4361240 RPE_3552 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782462.1 3973729 R 316055 CDS YP_782463.1 115525552 4361241 complement(3974383..3974802) 1 NC_008435.1 PFAM: protein of unknown function UPF0047; KEGG: rpa:RPA3218 hypothetical protein; hypothetical protein 3974802 4361241 RPE_3553 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782463.1 3974383 R 316055 CDS YP_782464.1 115525553 4361242 complement(3975001..3976083) 1 NC_008435.1 PFAM: Choloylglycine hydrolase; KEGG: rpc:RPC_3412 choloylglycine hydrolase; choloylglycine hydrolase 3976083 4361242 RPE_3554 Rhodopseudomonas palustris BisA53 choloylglycine hydrolase YP_782464.1 3975001 R 316055 CDS YP_782465.1 115525554 4361243 complement(3976306..3977514) 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr2988 hypothetical protein; extracellular ligand-binding receptor 3977514 4361243 RPE_3555 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_782465.1 3976306 R 316055 CDS YP_782466.1 115525555 4361244 complement(3977929..3979257) 1 NC_008435.1 PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpb:RPB_2324 AAA_5 ATPase; recombination factor protein RarA 3979257 4361244 RPE_3556 Rhodopseudomonas palustris BisA53 recombination factor protein RarA YP_782466.1 3977929 R 316055 CDS YP_782467.1 115525556 4361245 complement(3979490..3980884) 1 NC_008435.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_3417 peptidase S1C, Do; peptidase S1C, Do 3980884 4361245 RPE_3557 Rhodopseudomonas palustris BisA53 peptidase S1C, Do YP_782467.1 3979490 R 316055 CDS YP_782468.1 115525557 4361246 3981096..3982109 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_3419 alcohol dehydrogenase GroES-like; NADPH:quinone reductase 3982109 4361246 RPE_3558 Rhodopseudomonas palustris BisA53 NADPH:quinone reductase YP_782468.1 3981096 D 316055 CDS YP_782469.1 115525558 4361247 complement(3982148..3982612) 1 NC_008435.1 PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: rpc:RPC_3420 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 3982612 4361247 RPE_3559 Rhodopseudomonas palustris BisA53 glutathione-dependent formaldehyde-activating protein YP_782469.1 3982148 R 316055 CDS YP_782470.1 115525559 4361248 complement(3982636..3983430) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpa:RPA3224 putative short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3983430 4361248 RPE_3560 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782470.1 3982636 R 316055 CDS YP_782471.1 115525560 4361249 complement(3983565..3983975) 1 NC_008435.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 3983975 rplQ 4361249 rplQ Rhodopseudomonas palustris BisA53 50S ribosomal protein L17 YP_782471.1 3983565 R 316055 CDS YP_782472.1 115525561 4361250 complement(3984118..3985137) 1 NC_008435.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 3985137 4361250 RPE_3562 Rhodopseudomonas palustris BisA53 DNA-directed RNA polymerase subunit alpha YP_782472.1 3984118 R 316055 CDS YP_782473.1 115525562 4361251 complement(3985243..3985632) 1 NC_008435.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 3985632 4361251 RPE_3563 Rhodopseudomonas palustris BisA53 30S ribosomal protein S11 YP_782473.1 3985243 R 316055 CDS YP_782474.1 115525563 4361252 complement(3985767..3986135) 1 NC_008435.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 3986135 rpsM 4361252 rpsM Rhodopseudomonas palustris BisA53 30S ribosomal protein S13 YP_782474.1 3985767 R 316055 CDS YP_782475.1 115525564 4361253 complement(3986313..3987383) 1 NC_008435.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 3987383 adk 4361253 adk Rhodopseudomonas palustris BisA53 adenylate kinase YP_782475.1 3986313 R 316055 CDS YP_782476.1 115525565 4361254 complement(3987380..3988711) 1 NC_008435.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 3988711 secY 4361254 secY Rhodopseudomonas palustris BisA53 preprotein translocase subunit SecY YP_782476.1 3987380 R 316055 CDS YP_782477.1 115525566 4361255 complement(3988854..3989339) 1 NC_008435.1 late assembly protein; 50S ribosomal protein L15 3989339 rplO 4361255 rplO Rhodopseudomonas palustris BisA53 50S ribosomal protein L15 YP_782477.1 3988854 R 316055 CDS YP_782478.1 115525567 4361256 complement(3989352..3989546) 1 NC_008435.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 3989546 rpmD 4361256 rpmD Rhodopseudomonas palustris BisA53 50S ribosomal protein L30 YP_782478.1 3989352 R 316055 CDS YP_782479.1 115525568 4361257 complement(3989634..3990206) 1 NC_008435.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 3990206 rpsE 4361257 rpsE Rhodopseudomonas palustris BisA53 30S ribosomal protein S5 YP_782479.1 3989634 R 316055 CDS YP_782480.1 115525569 4361258 complement(3990272..3990634) 1 NC_008435.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 3990634 rplR 4361258 rplR Rhodopseudomonas palustris BisA53 50S ribosomal protein L18 YP_782480.1 3990272 R 316055 CDS YP_782481.1 115525570 4361259 complement(3990646..3991179) 1 NC_008435.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 3991179 rplF 4361259 rplF Rhodopseudomonas palustris BisA53 50S ribosomal protein L6 YP_782481.1 3990646 R 316055 CDS YP_782482.1 115525571 4361260 complement(3991193..3991591) 1 NC_008435.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 3991591 rpsH 4361260 rpsH Rhodopseudomonas palustris BisA53 30S ribosomal protein S8 YP_782482.1 3991193 R 316055 CDS YP_782483.1 115525572 4361261 complement(3991603..3991908) 1 NC_008435.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 3991908 rpsN 4361261 rpsN Rhodopseudomonas palustris BisA53 30S ribosomal protein S14 YP_782483.1 3991603 R 316055 CDS YP_782484.1 115525573 4361262 complement(3991952..3992509) 1 NC_008435.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 3992509 rplE 4361262 rplE Rhodopseudomonas palustris BisA53 50S ribosomal protein L5 YP_782484.1 3991952 R 316055 CDS YP_782485.1 115525574 4361263 complement(3992502..3992816) 1 NC_008435.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 3992816 rplX 4361263 rplX Rhodopseudomonas palustris BisA53 50S ribosomal protein L24 YP_782485.1 3992502 R 316055 CDS YP_782486.1 115525575 4361264 complement(3992816..3993184) 1 NC_008435.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 3993184 rplN 4361264 rplN Rhodopseudomonas palustris BisA53 50S ribosomal protein L14 YP_782486.1 3992816 R 316055 CDS YP_782487.1 115525576 4361265 complement(3993223..3993471) 1 NC_008435.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 3993471 rpsQ 4361265 rpsQ Rhodopseudomonas palustris BisA53 30S ribosomal protein S17 YP_782487.1 3993223 R 316055 CDS YP_782488.1 115525577 4361266 complement(3993481..3993687) 1 NC_008435.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 3993687 4361266 RPE_3578 Rhodopseudomonas palustris BisA53 50S ribosomal protein L29 YP_782488.1 3993481 R 316055 CDS YP_782489.1 115525578 4361267 complement(3993697..3994110) 1 NC_008435.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 3994110 rplP 4361267 rplP Rhodopseudomonas palustris BisA53 50S ribosomal protein L16 YP_782489.1 3993697 R 316055 CDS YP_782490.1 115525579 4361268 complement(3994143..3994841) 1 NC_008435.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 3994841 rpsC 4361268 rpsC Rhodopseudomonas palustris BisA53 30S ribosomal protein S3 YP_782490.1 3994143 R 316055 CDS YP_782491.1 115525580 4361269 complement(3994865..3995251) 1 NC_008435.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 3995251 rplV 4361269 rplV Rhodopseudomonas palustris BisA53 50S ribosomal protein L22 YP_782491.1 3994865 R 316055 CDS YP_782492.1 115525581 4361270 complement(3995262..3995540) 1 NC_008435.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 3995540 rpsS 4361270 rpsS Rhodopseudomonas palustris BisA53 30S ribosomal protein S19 YP_782492.1 3995262 R 316055 CDS YP_782493.1 115525582 4361271 complement(3995553..3996386) 1 NC_008435.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 3996386 rplB 4361271 rplB Rhodopseudomonas palustris BisA53 50S ribosomal protein L2 YP_782493.1 3995553 R 316055 CDS YP_782494.1 115525583 4361272 complement(3996400..3996699) 1 NC_008435.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 3996699 rplW 4361272 rplW Rhodopseudomonas palustris BisA53 50S ribosomal protein L23 YP_782494.1 3996400 R 316055 CDS YP_782495.1 115525584 4361273 complement(3996696..3997316) 1 NC_008435.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 3997316 rplD 4361273 rplD Rhodopseudomonas palustris BisA53 50S ribosomal protein L4 YP_782495.1 3996696 R 316055 CDS YP_782496.1 115525585 4361274 complement(3997318..3998040) 1 NC_008435.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 3998040 rplC 4361274 rplC Rhodopseudomonas palustris BisA53 50S ribosomal protein L3 YP_782496.1 3997318 R 316055 CDS YP_782497.1 115525586 4361275 complement(3998095..3998403) 1 NC_008435.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 3998403 rpsJ 4361275 rpsJ Rhodopseudomonas palustris BisA53 30S ribosomal protein S10 YP_782497.1 3998095 R 316055 CDS YP_782498.1 115525587 4361276 complement(3998504..3999694) 1 NC_008435.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 3999694 4361276 RPE_3588 Rhodopseudomonas palustris BisA53 elongation factor Tu YP_782498.1 3998504 R 316055 CDS YP_782499.1 115525588 4361277 complement(3999733..4001805) 1 NC_008435.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 4001805 4361277 RPE_3589 Rhodopseudomonas palustris BisA53 elongation factor G YP_782499.1 3999733 R 316055 CDS YP_782500.1 115525589 4361278 complement(4001836..4002306) 1 NC_008435.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 4002306 4361278 RPE_3590 Rhodopseudomonas palustris BisA53 30S ribosomal protein S7 YP_782500.1 4001836 R 316055 CDS YP_782501.2 162134980 4361279 complement(4002322..4002693) 1 NC_008435.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 4002693 rpsL 4361279 rpsL Rhodopseudomonas palustris BisA53 30S ribosomal protein S12 YP_782501.2 4002322 R 316055 CDS YP_782502.1 115525591 4361280 complement(4003375..4004574) 1 NC_008435.1 KEGG: rpc:RPC_3454 hypothetical protein; hypothetical protein 4004574 4361280 RPE_3592 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782502.1 4003375 R 316055 CDS YP_782503.1 115525592 4361281 4004676..4005851 1 NC_008435.1 PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: nha:Nham_1535 monooxygenase, FAD-binding; monooxygenase protein 4005851 4361281 RPE_3593 Rhodopseudomonas palustris BisA53 monooxygenase protein YP_782503.1 4004676 D 316055 CDS YP_782504.1 115525593 4361282 complement(4005870..4007963) 1 NC_008435.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_3455 ABC transporter related; ABC transporter-like protein 4007963 4361282 RPE_3594 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782504.1 4005870 R 316055 CDS YP_782505.1 115525594 4361283 complement(4008109..4010166) 1 NC_008435.1 PFAM: amine oxidase; Methyltransferase type 11; KEGG: rpc:RPC_3456 methyltransferase type 11; type 11 methyltransferase 4010166 4361283 RPE_3595 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_782505.1 4008109 R 316055 CDS YP_782506.1 115525595 4361284 complement(4010473..4014675) 1 NC_008435.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 4014675 4361284 RPE_3596 Rhodopseudomonas palustris BisA53 DNA-directed RNA polymerase subunit beta' YP_782506.1 4010473 R 316055 CDS YP_782507.1 115525596 4361285 complement(4014858..4018979) 1 NC_008435.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 4018979 rpoB 4361285 rpoB Rhodopseudomonas palustris BisA53 DNA-directed RNA polymerase subunit beta YP_782507.1 4014858 R 316055 CDS YP_782508.1 115525597 4361286 complement(4019460..4019831) 1 NC_008435.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 4019831 rplL 4361286 rplL Rhodopseudomonas palustris BisA53 50S ribosomal protein L7/L12 YP_782508.1 4019460 R 316055 CDS YP_782509.1 115525598 4361287 complement(4019881..4020399) 1 NC_008435.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 4020399 rplJ 4361287 rplJ Rhodopseudomonas palustris BisA53 50S ribosomal protein L10 YP_782509.1 4019881 R 316055 CDS YP_782510.1 115525599 4361288 4021271..4022182 1 NC_008435.1 KEGG: lpf:lpl2545 hypothetical protein; hypothetical protein 4022182 4361288 RPE_3600 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782510.1 4021271 D 316055 CDS YP_782511.1 115525600 4361289 4022401..4022670 1 NC_008435.1 hypothetical protein 4022670 4361289 RPE_3601 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782511.1 4022401 D 316055 CDS YP_782512.1 115525601 4361290 complement(4022750..4023403) 1 NC_008435.1 KEGG: rpb:RPB_2282 hypothetical protein; hypothetical protein 4023403 4361290 RPE_3602 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782512.1 4022750 R 316055 CDS YP_782513.1 115525602 4361291 complement(4023400..4025568) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpc:RPC_3464 twin-arginine translocation pathway signal; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 4025568 4361291 RPE_3603 Rhodopseudomonas palustris BisA53 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_782513.1 4023400 R 316055 CDS YP_782514.1 115525603 4361292 complement(4025572..4026036) 1 NC_008435.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rpb:RPB_2280 (2Fe-2S)-binding protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 4026036 4361292 RPE_3604 Rhodopseudomonas palustris BisA53 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_782514.1 4025572 R 316055 CDS YP_782515.1 115525604 4361293 complement(4026202..4027152) 1 NC_008435.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: rpb:RPB_2279 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 4027152 4361293 RPE_3605 Rhodopseudomonas palustris BisA53 D-isomer specific 2-hydroxyacid dehydrogenase YP_782515.1 4026202 R 316055 CDS YP_782516.1 115525605 4361294 complement(4027245..4027937) 1 NC_008435.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 4027937 rplA 4361294 rplA Rhodopseudomonas palustris BisA53 50S ribosomal protein L1 YP_782516.1 4027245 R 316055 CDS YP_782517.1 115525606 4361295 complement(4027943..4028371) 1 NC_008435.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 4028371 rplK 4361295 rplK Rhodopseudomonas palustris BisA53 50S ribosomal protein L11 YP_782517.1 4027943 R 316055 CDS YP_782518.1 115525607 4361296 complement(4028618..4029148) 1 NC_008435.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 4029148 nusG 4361296 nusG Rhodopseudomonas palustris BisA53 transcription antitermination protein NusG YP_782518.1 4028618 R 316055 CDS YP_782519.1 115525608 4361297 complement(4029170..4029361) 1 NC_008435.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 4029361 secE 4361297 secE Rhodopseudomonas palustris BisA53 preprotein translocase subunit SecE YP_782519.1 4029170 R 316055 CDS YP_782520.1 115525609 4361298 4029937..4031022 1 NC_008435.1 PFAM: Rare lipoprotein A; nuclease (SNase domain protein); KEGG: rpa:RPA2332 rare lipoprotein A:Staphylococcus nuclease (SNase-like); nuclease 4031022 4361298 RPE_3610 Rhodopseudomonas palustris BisA53 nuclease YP_782520.1 4029937 D 316055 CDS YP_782521.1 115525610 4361300 4031468..4033432 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_3475 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4033432 4361300 RPE_3611 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_782521.1 4031468 D 316055 CDS YP_782522.1 115525611 4361301 complement(4033514..4034704) 1 NC_008435.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4034704 4361301 RPE_3612 Rhodopseudomonas palustris BisA53 elongation factor Tu YP_782522.1 4033514 R 316055 CDS YP_782523.1 115525612 4361302 4034866..4036095 1 NC_008435.1 PFAM: beta-lactamase; KEGG: rpb:RPB_2265 beta-lactamase; beta-lactamase 4036095 4361302 RPE_3613 Rhodopseudomonas palustris BisA53 beta-lactamase YP_782523.1 4034866 D 316055 CDS YP_782524.1 115525613 4361303 complement(4036212..4036979) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpc:RPC_3478 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4036979 4361303 RPE_3614 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782524.1 4036212 R 316055 CDS YP_782525.1 115525614 4361304 complement(4037036..4037788) 1 NC_008435.1 PFAM: Phosphoglycerate mutase; KEGG: rpc:RPC_3479 phosphoglycerate mutase; phosphoglycerate mutase 4037788 4361304 RPE_3615 Rhodopseudomonas palustris BisA53 phosphoglycerate mutase YP_782525.1 4037036 R 316055 CDS YP_782526.1 115525615 4361305 4037933..4038718 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpd:RPD_3208 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4038718 4361305 RPE_3616 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782526.1 4037933 D 316055 CDS YP_782527.1 115525616 4361306 complement(4039152..4039433) 1 NC_008435.1 hypothetical protein 4039433 4361306 RPE_3617 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782527.1 4039152 R 316055 CDS YP_782528.1 115525617 4361307 complement(4040021..4041082) 1 NC_008435.1 PFAM: aminoglycoside phosphotransferase; KEGG: rpb:RPB_2261 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 4041082 4361307 RPE_3618 Rhodopseudomonas palustris BisA53 aminoglycoside phosphotransferase YP_782528.1 4040021 R 316055 CDS YP_782529.1 115525618 4361308 complement(4041247..4042482) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA3289 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4042482 4361308 RPE_3619 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_782529.1 4041247 R 316055 CDS YP_782530.1 115525619 4361309 4042726..4043385 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpd:RPD_3211 regulatory protein, TetR; TetR family transcriptional regulator 4043385 4361309 RPE_3620 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_782530.1 4042726 D 316055 CDS YP_782531.1 115525620 4361310 4043583..4044014 1 NC_008435.1 KEGG: rpb:RPB_2764 hypothetical protein; hypothetical protein 4044014 4361310 RPE_3621 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782531.1 4043583 D 316055 CDS YP_782532.1 115525621 4361311 4044204..4044749 1 NC_008435.1 KEGG: rpc:RPC_3484 hypothetical protein; hypothetical protein 4044749 4361311 RPE_3622 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782532.1 4044204 D 316055 CDS YP_782533.1 115525622 4361312 4044784..4045767 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpb:RPB_2975 alpha/beta hydrolase; alpha/beta hydrolase fold protein 4045767 4361312 RPE_3623 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_782533.1 4044784 D 316055 CDS YP_782534.1 115525623 4361313 complement(4045710..4046687) 1 NC_008435.1 TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: rpc:RPC_3639 cysteine synthase A; cysteine synthase A 4046687 4361313 RPE_3624 Rhodopseudomonas palustris BisA53 cysteine synthase A YP_782534.1 4045710 R 316055 CDS YP_782535.1 115525624 4361314 4047168..4047497 1 NC_008435.1 KEGG: rpb:RPB_2807 hypothetical protein; hypothetical protein 4047497 4361314 RPE_3625 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782535.1 4047168 D 316055 CDS YP_782536.1 115525625 4361315 4047802..4048263 1 NC_008435.1 KEGG: rpc:RPC_0102 hypothetical protein; hypothetical protein 4048263 4361315 RPE_3626 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782536.1 4047802 D 316055 CDS YP_782537.1 115525626 4361316 complement(4048416..4050761) 1 NC_008435.1 KEGG: rpc:RPC_4603 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 4050761 4361316 RPE_3627 Rhodopseudomonas palustris BisA53 PAS/PAC sensor hybrid histidine kinase YP_782537.1 4048416 R 316055 CDS YP_782538.1 115525627 4361317 complement(4050763..4051392) 1 NC_008435.1 PFAM: CheC domain protein; KEGG: rpc:RPC_4604 CheC, inhibitor of MCP methylation; MCP methylation inhibitor CheC 4051392 4361317 RPE_3628 Rhodopseudomonas palustris BisA53 MCP methylation inhibitor CheC YP_782538.1 4050763 R 316055 CDS YP_782539.1 115525628 4361318 complement(4051389..4051772) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_4605 response regulator receiver domain protein (CheY-like); response regulator receiver protein 4051772 4361318 RPE_3629 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_782539.1 4051389 R 316055 CDS YP_782540.1 115525629 4361319 complement(4051824..4052030) 1 NC_008435.1 KEGG: rpc:RPC_4606 hypothetical protein; hypothetical protein 4052030 4361319 RPE_3630 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782540.1 4051824 R 316055 CDS YP_782541.1 115525630 4361320 complement(4052060..4054327) 1 NC_008435.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rpc:RPC_4607 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase 4054327 4361320 RPE_3631 Rhodopseudomonas palustris BisA53 CheA signal transduction histidine kinase YP_782541.1 4052060 R 316055 CDS YP_782542.1 115525631 4361321 complement(4054324..4054716) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_4608 response regulator receiver domain protein (CheY-like); response regulator receiver protein 4054716 4361321 RPE_3632 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_782542.1 4054324 R 316055 CDS YP_782543.1 115525632 4361322 complement(4054703..4055578) 1 NC_008435.1 PFAM: MCP methyltransferase, CheR-type; KEGG: rpc:RPC_4609 MCP methyltransferase, CheR-type; chemotaxis protein CheR 4055578 4361322 RPE_3633 Rhodopseudomonas palustris BisA53 chemotaxis protein CheR YP_782543.1 4054703 R 316055 CDS YP_782544.1 115525633 4361323 complement(4055565..4056209) 1 NC_008435.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rpc:RPC_4610 PBS lyase heat-like repeat; HEAT repeat-containing PBS lyase 4056209 4361323 RPE_3634 Rhodopseudomonas palustris BisA53 HEAT repeat-containing PBS lyase YP_782544.1 4055565 R 316055 CDS YP_782545.1 115525634 4361324 complement(4056196..4057302) 1 NC_008435.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: rpc:RPC_4611 response regulator receiver (CheY-like) modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase 4057302 4361324 RPE_3635 Rhodopseudomonas palustris BisA53 response regulator receiver modulated CheB methylesterase YP_782545.1 4056196 R 316055 CDS YP_782546.1 115525635 4361325 complement(4057299..4058894) 1 NC_008435.1 PFAM: CheW domain protein; KEGG: rpc:RPC_4612 CheW protein; CheW protein 4058894 4361325 RPE_3636 Rhodopseudomonas palustris BisA53 CheW protein YP_782546.1 4057299 R 316055 CDS YP_782547.1 115525636 4361326 complement(4058887..4060968) 1 NC_008435.1 PFAM: chemotaxis sensory transducer; KEGG: rpc:RPC_4613 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4060968 4361326 RPE_3637 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_782547.1 4058887 R 316055 CDS YP_782548.1 115525637 4361327 4061220..4061873 1 NC_008435.1 PFAM: CheC domain protein; KEGG: rpc:RPC_4614 CheC, inhibitor of MCP methylation; MCP methylation inhibitor CheC 4061873 4361327 RPE_3638 Rhodopseudomonas palustris BisA53 MCP methylation inhibitor CheC YP_782548.1 4061220 D 316055 CDS YP_782549.1 115525638 4361328 complement(4061894..4063006) 1 NC_008435.1 TIGRFAM: putative ribonuclease BN; PFAM: ribonuclease BN; KEGG: rpc:RPC_4597 ribonuclease BN, putative; putative ribonuclease BN 4063006 4361328 RPE_3639 Rhodopseudomonas palustris BisA53 putative ribonuclease BN YP_782549.1 4061894 R 316055 CDS YP_782550.1 115525639 4361329 complement(4063056..4063319) 1 NC_008435.1 PFAM: Transglycosylase-associated protein; KEGG: rpc:RPC_2982 transglycosylase-associated protein; transglycosylase-associated protein 4063319 4361329 RPE_3640 Rhodopseudomonas palustris BisA53 transglycosylase-associated protein YP_782550.1 4063056 R 316055 CDS YP_782551.1 115525640 4361330 4063539..4064615 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:bll3759 hypothetical protein; alpha/beta hydrolase fold protein 4064615 4361330 RPE_3641 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_782551.1 4063539 D 316055 CDS YP_782552.1 115525641 4361331 complement(4064566..4064694) 1 NC_008435.1 KEGG: rpa:RPA2078 hypothetical protein; hypothetical protein 4064694 4361331 RPE_3642 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782552.1 4064566 R 316055 CDS YP_782553.1 115525642 4361332 complement(4064675..4065640) 1 NC_008435.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_4596 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4065640 4361332 RPE_3643 Rhodopseudomonas palustris BisA53 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_782553.1 4064675 R 316055 CDS YP_782554.1 115525643 4361333 complement(4065633..4067762) 1 NC_008435.1 KEGG: rfr:Rfer_2156 malto-oligosyltrehalose synthase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; 4-alpha-glucanotransferase 4067762 4361333 RPE_3644 Rhodopseudomonas palustris BisA53 4-alpha-glucanotransferase YP_782554.1 4065633 R 316055 CDS YP_782555.1 115525644 4361334 4068070..4069347 1 NC_008435.1 PFAM: manganese containing catalase; protein of unknown function DUF892; KEGG: bja:bll3758 Mn-containing catalase; catalase 4069347 4361334 RPE_3645 Rhodopseudomonas palustris BisA53 catalase YP_782555.1 4068070 D 316055 CDS YP_782556.1 115525645 4361335 4069537..4070187 1 NC_008435.1 KEGG: rpd:RPD_0913 hypothetical protein; hypothetical protein 4070187 4361335 RPE_3646 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782556.1 4069537 D 316055 CDS YP_782557.1 115525646 4361336 complement(4070296..4071066) 1 NC_008435.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpd:RPD_0579 exodeoxyribonuclease III (xth); exodeoxyribonuclease III Xth 4071066 4361336 RPE_3647 Rhodopseudomonas palustris BisA53 exodeoxyribonuclease III Xth YP_782557.1 4070296 R 316055 CDS YP_782558.1 115525647 4361337 complement(4071107..4071976) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpb:RPB_1505 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4071976 4361337 RPE_3648 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782558.1 4071107 R 316055 CDS YP_782559.1 115525648 4361338 4072180..4073349 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpc:RPC_1223 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 4073349 4361338 RPE_3649 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_782559.1 4072180 D 316055 CDS YP_782560.1 115525649 4361339 complement(4073470..4075761) 1 NC_008435.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rpd:RPD_0346 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit 4075761 4361339 RPE_3650 Rhodopseudomonas palustris BisA53 oxidoreductase alpha (molybdopterin) subunit YP_782560.1 4073470 R 316055 CDS YP_782561.1 115525650 4361340 4075967..4076152 1 NC_008435.1 KEGG: bja:blr4214 hypothetical protein; hypothetical protein 4076152 4361340 RPE_3651 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782561.1 4075967 D 316055 CDS YP_782562.1 115525651 4361341 complement(4076226..4084757) 1 NC_008435.1 PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: bxe:Bxe_C1346 putative cyclic beta 1-2 glucan synthetase; glycosyltransferase 4084757 4361341 RPE_3652 Rhodopseudomonas palustris BisA53 glycosyltransferase YP_782562.1 4076226 R 316055 CDS YP_782563.1 115525652 4361342 complement(4085324..4085458) 1 NC_008435.1 KEGG: rpd:RPD_1604 hypothetical protein; hypothetical protein 4085458 4361342 RPE_3653 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782563.1 4085324 R 316055 CDS YP_782564.1 115525653 4361343 complement(4086465..4087217) 1 NC_008435.1 PFAM: HWE histidine kinase; KEGG: rpc:RPC_0615 signal transduction histidine kinase; signal transduction histidine kinase 4087217 4361343 RPE_3654 Rhodopseudomonas palustris BisA53 signal transduction histidine kinase YP_782564.1 4086465 R 316055 CDS YP_782565.1 115525654 4361344 4087441..4088139 1 NC_008435.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: bja:bll2244 probable cAMP-regulatory protein; Crp/FNR family transcriptional regulator 4088139 4361344 RPE_3655 Rhodopseudomonas palustris BisA53 Crp/FNR family transcriptional regulator YP_782565.1 4087441 D 316055 CDS YP_782566.1 115525655 4361345 4088676..4089071 1 NC_008435.1 KEGG: nha:Nham_3949 hypothetical protein; hypothetical protein 4089071 4361345 RPE_3656 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782566.1 4088676 D 316055 CDS YP_782567.1 115525656 4361346 complement(4089127..4090173) 1 NC_008435.1 PFAM: Bile acid:sodium symporter; KEGG: rpd:RPD_3417 bile acid:sodium symporter; bile acid:sodium symporter 4090173 4361346 RPE_3657 Rhodopseudomonas palustris BisA53 bile acid:sodium symporter YP_782567.1 4089127 R 316055 CDS YP_782568.1 115525657 4361347 complement(4090181..4090606) 1 NC_008435.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: rpd:RPD_3418 arsenate reductase; arsenate reductase 4090606 4361347 RPE_3658 Rhodopseudomonas palustris BisA53 arsenate reductase YP_782568.1 4090181 R 316055 CDS YP_782569.1 115525658 4361348 complement(4090606..4091133) 1 NC_008435.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpd:RPD_3419 low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 4091133 4361348 RPE_3659 Rhodopseudomonas palustris BisA53 protein tyrosine phosphatase YP_782569.1 4090606 R 316055 CDS YP_782570.1 115525659 4361349 complement(4091126..4091482) 1 NC_008435.1 PFAM: regulatory protein, ArsR; KEGG: rpa:RPA3556 transcriptional regulator, ArsR family, ArsR2; ArsR family transcriptional regulator 4091482 4361349 RPE_3660 Rhodopseudomonas palustris BisA53 ArsR family transcriptional regulator YP_782570.1 4091126 R 316055 CDS YP_782571.1 115525660 4361350 complement(4091709..4091942) 1 NC_008435.1 KEGG: rpb:RPB_1646 thiol-disulfide isomerase and thioredoxins; thiol-disulfide isomerase and thioredoxins 4091942 4361350 RPE_3661 Rhodopseudomonas palustris BisA53 thiol-disulfide isomerase and thioredoxins YP_782571.1 4091709 R 316055 CDS YP_782572.1 115525661 4361351 complement(4091955..4093007) 1 NC_008435.1 PFAM: permease; KEGG: rpb:RPB_1645 permease; permease 4093007 4361351 RPE_3662 Rhodopseudomonas palustris BisA53 permease YP_782572.1 4091955 R 316055 CDS YP_782573.1 115525662 4361352 complement(4093004..4093315) 1 NC_008435.1 PFAM: regulatory protein, ArsR; KEGG: rpb:RPB_1644 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 4093315 4361352 RPE_3663 Rhodopseudomonas palustris BisA53 ArsR family transcriptional regulator YP_782573.1 4093004 R 316055 CDS YP_782574.1 115525663 4361354 4094093..4094602 1 NC_008435.1 PFAM: protein of unknown function DUF892; KEGG: rpc:RPC_3623 protein of unknown function DUF892; hypothetical protein 4094602 4361354 RPE_3664 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782574.1 4094093 D 316055 CDS YP_782575.1 115525664 4361355 4094617..4095180 1 NC_008435.1 KEGG: rpc:RPC_3624 hypothetical protein; hypothetical protein 4095180 4361355 RPE_3665 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782575.1 4094617 D 316055 CDS YP_782576.1 115525665 4361356 4095496..4096332 1 NC_008435.1 PFAM: transglutaminase domain protein; KEGG: rpc:RPC_3627 transglutaminase-like; transglutaminase domain-containing protein 4096332 4361356 RPE_3666 Rhodopseudomonas palustris BisA53 transglutaminase domain-containing protein YP_782576.1 4095496 D 316055 CDS YP_782577.1 115525666 4361357 complement(4096469..4096681) 1 NC_008435.1 KEGG: rpc:RPC_3628 hypothetical protein; hypothetical protein 4096681 4361357 RPE_3667 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782577.1 4096469 R 316055 CDS YP_782578.1 115525667 4361358 4096804..4097220 1 NC_008435.1 KEGG: rpd:RPD_3216 hypothetical protein; hypothetical protein 4097220 4361358 RPE_3668 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782578.1 4096804 D 316055 CDS YP_782579.1 115525668 4361359 complement(4097291..4098628) 1 NC_008435.1 PFAM: Carbohydrate-selective porin OprB; KEGG: rpc:RPC_3629 carbohydrate-selective porin OprB; carbohydrate-selective porin OprB 4098628 4361359 RPE_3669 Rhodopseudomonas palustris BisA53 carbohydrate-selective porin OprB YP_782579.1 4097291 R 316055 CDS YP_782580.1 115525669 4361360 complement(4099057..4100472) 1 NC_008435.1 KEGG: rpc:RPC_3630 hypothetical protein; hypothetical protein 4100472 4361360 RPE_3670 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782580.1 4099057 R 316055 CDS YP_782581.1 115525670 4361361 complement(4100469..4101308) 1 NC_008435.1 PFAM: iron permease FTR1; KEGG: rpc:RPC_3631 iron permease FTR1; iron permease FTR1 4101308 4361361 RPE_3671 Rhodopseudomonas palustris BisA53 iron permease FTR1 YP_782581.1 4100469 R 316055 CDS YP_782582.1 115525671 4361362 complement(4101325..4101684) 1 NC_008435.1 KEGG: rpc:RPC_3632 hypothetical protein; hypothetical protein 4101684 4361362 RPE_3672 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782582.1 4101325 R 316055 CDS YP_782583.1 115525672 4361363 complement(4101847..4102398) 1 NC_008435.1 KEGG: rpc:RPC_3633 conserved hypothetical membrane antigen; membrane antigen 4102398 4361363 RPE_3673 Rhodopseudomonas palustris BisA53 membrane antigen YP_782583.1 4101847 R 316055 CDS YP_782584.1 115525673 4361364 complement(4102677..4103528) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: bja:blr7343 probable short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4103528 4361364 RPE_3674 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782584.1 4102677 R 316055 CDS YP_782585.1 115525674 4361365 complement(4103525..4104103) 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: fra:Francci3_2475 transcriptional regulator, TetR family; TetR family transcriptional regulator 4104103 4361365 RPE_3675 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_782585.1 4103525 R 316055 CDS YP_782586.1 115525675 4361366 complement(4104200..4105177) 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_0558 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4105177 4361366 RPE_3676 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_782586.1 4104200 R 316055 CDS YP_782587.1 115525676 4361367 complement(4105773..4106294) 1 NC_008435.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: rpc:RPC_2183 cupin 2, conserved barrel; cupin 4106294 4361367 RPE_3677 Rhodopseudomonas palustris BisA53 cupin YP_782587.1 4105773 R 316055 CDS YP_782588.1 115525677 4361368 complement(4106281..4107387) 1 NC_008435.1 PFAM: ribulose bisphosphate carboxylase, large chain; KEGG: rpc:RPC_2184 ribulose 1 5-bisphosphate carboxylase large subunit-like; RuBisCO-like protein Rlp1 4107387 4361368 RPE_3678 Rhodopseudomonas palustris BisA53 RuBisCO-like protein Rlp1 YP_782588.1 4106281 R 316055 CDS YP_782589.1 115525678 4361369 complement(4107417..4109297) 1 NC_008435.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rpd:RPD_1058 ferrous iron transport protein B; ferrous iron transport protein B 4109297 4361369 RPE_3679 Rhodopseudomonas palustris BisA53 ferrous iron transport protein B YP_782589.1 4107417 R 316055 CDS YP_782590.1 115525679 4361370 complement(4109310..4109597) 1 NC_008435.1 PFAM: FeoA family protein; KEGG: rpd:RPD_1057 FeoA; FeoA family protein 4109597 4361370 RPE_3680 Rhodopseudomonas palustris BisA53 FeoA family protein YP_782590.1 4109310 R 316055 CDS YP_782591.1 115525680 4361371 complement(4109923..4110246) 1 NC_008435.1 hypothetical protein 4110246 4361371 RPE_3681 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782591.1 4109923 R 316055 CDS YP_782592.1 115525681 4361373 4110751..4111581 1 NC_008435.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase, substrate binding; KEGG: rpc:RPC_3641 RNA methyltransferase TrmH, group 3; RNA methyltransferase 4111581 4361373 RPE_3682 Rhodopseudomonas palustris BisA53 RNA methyltransferase YP_782592.1 4110751 D 316055 CDS YP_782593.1 115525682 4361374 complement(4111753..4112739) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: rpc:RPC_3643 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4112739 4361374 RPE_3683 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_782593.1 4111753 R 316055 CDS YP_782594.1 115525683 4361375 complement(4112897..4113814) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3644 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4113814 4361375 RPE_3684 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport system inner membrane protein YP_782594.1 4112897 R 316055 CDS YP_782595.1 115525684 4361376 complement(4113807..4114763) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3645 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4114763 4361376 RPE_3685 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport system inner membrane protein YP_782595.1 4113807 R 316055 CDS YP_782596.1 115525685 4361378 complement(4116626..4117696) 1 NC_008435.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_3647 ABC transporter related; ABC transporter-like protein 4117696 4361378 RPE_3687 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782596.1 4116626 R 316055 CDS YP_782597.1 115525686 4361379 4117883..4119682 1 NC_008435.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 4119682 4361379 RPE_3688 Rhodopseudomonas palustris BisA53 dihydroxy-acid dehydratase YP_782597.1 4117883 D 316055 CDS YP_782598.1 115525687 4361380 4119853..4120587 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_3649 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4120587 4361380 RPE_3689 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782598.1 4119853 D 316055 CDS YP_782599.1 115525688 4361381 4120760..4121506 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpc:RPC_3650 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4121506 4361381 RPE_3690 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782599.1 4120760 D 316055 CDS YP_782600.1 115525689 4361383 complement(4121796..4122038) 1 NC_008435.1 hypothetical protein 4122038 4361383 RPE_3691 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782600.1 4121796 R 316055 CDS YP_782601.1 115525690 4361384 4122190..4124904 1 NC_008435.1 PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: rpc:RPC_4481 iron-containing alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 4124904 4361384 RPE_3692 Rhodopseudomonas palustris BisA53 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_782601.1 4122190 D 316055 CDS YP_782602.1 115525691 4361385 4125232..4125933 1 NC_008435.1 hypothetical protein 4125933 4361385 RPE_3693 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782602.1 4125232 D 316055 CDS YP_782603.1 115525692 4361386 complement(4126090..4126428) 1 NC_008435.1 KEGG: rpd:RPD_0683 hypothetical protein; hypothetical protein 4126428 4361386 RPE_3694 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782603.1 4126090 R 316055 CDS YP_782604.1 115525693 4361387 complement(4126747..4128588) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: neu:NE1909 diguanylate cyclase/phosphodiesterase domain 2 (EAL); diguanylate cyclase/phosphodiesterase 4128588 4361387 RPE_3695 Rhodopseudomonas palustris BisA53 diguanylate cyclase/phosphodiesterase YP_782604.1 4126747 R 316055 CDS YP_782605.1 115525694 4361388 complement(4128944..4129456) 1 NC_008435.1 KEGG: ret:RHE_PB00142 probable insertion sequence transposase protein; putative insertion sequence transposase protein 4129456 4361388 RPE_3696 Rhodopseudomonas palustris BisA53 putative insertion sequence transposase protein YP_782605.1 4128944 R 316055 CDS YP_782606.1 115525695 4361389 complement(4129533..4129892) 1 NC_008435.1 KEGG: ret:RHE_PB00143 probable insertion sequence transposase protein; putative insertion sequence transposase protein 4129892 4361389 RPE_3697 Rhodopseudomonas palustris BisA53 putative insertion sequence transposase protein YP_782606.1 4129533 R 316055 CDS YP_782607.1 115525696 4361390 4129973..4130440 1 NC_008435.1 hypothetical protein 4130440 4361390 RPE_3698 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782607.1 4129973 D 316055 CDS YP_782608.1 115525697 4361391 complement(4130547..4130816) 1 NC_008435.1 hypothetical protein 4130816 4361391 RPE_3699 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782608.1 4130547 R 316055 CDS YP_782609.1 115525698 4361392 complement(4130899..4131270) 1 NC_008435.1 KEGG: rpc:RPC_3660 hypothetical protein; hypothetical protein 4131270 4361392 RPE_3700 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782609.1 4130899 R 316055 CDS YP_782610.1 115525699 4361393 4131378..4131686 1 NC_008435.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: rpc:RPC_3661 excinuclease ABC, C subunit-like; excinuclease ABC subunit C 4131686 4361393 RPE_3701 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit C YP_782610.1 4131378 D 316055 CDS YP_782611.1 115525700 4361394 complement(4132495..4132746) 1 NC_008435.1 KEGG: bja:bsl6731 hypothetical protein; hypothetical protein 4132746 4361394 RPE_3702 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782611.1 4132495 R 316055 CDS YP_782612.1 115525701 4361395 complement(4132743..4133219) 1 NC_008435.1 PFAM: glutathione peroxidase; KEGG: rpc:RPC_3665 glutathione peroxidase; glutathione peroxidase 4133219 4361395 RPE_3703 Rhodopseudomonas palustris BisA53 glutathione peroxidase YP_782612.1 4132743 R 316055 CDS YP_782613.1 115525702 4361396 complement(4133247..4134647) 1 NC_008435.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 4134647 4361396 RPE_3704 Rhodopseudomonas palustris BisA53 amidase YP_782613.1 4133247 R 316055 CDS YP_782614.1 115525703 4361397 complement(4134717..4134974) 1 NC_008435.1 KEGG: rpc:RPC_3667 hypothetical protein; hypothetical protein 4134974 4361397 RPE_3705 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782614.1 4134717 R 316055 CDS YP_782615.1 115525704 4361398 4135095..4136060 1 NC_008435.1 KEGG: rpc:RPC_3668 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 4136060 4361398 RPE_3706 Rhodopseudomonas palustris BisA53 proline iminopeptidase YP_782615.1 4135095 D 316055 CDS YP_782616.1 115525705 4361399 4136189..4136641 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: bja:blr6749 hypothetical protein; hypothetical protein 4136641 4361399 RPE_3707 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782616.1 4136189 D 316055 CDS YP_782617.1 115525706 4361400 4136897..4139752 1 NC_008435.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate; bifunctional transaldolase/phosoglucose isomerase 4139752 4361400 RPE_3708 Rhodopseudomonas palustris BisA53 bifunctional transaldolase/phosoglucose isomerase YP_782617.1 4136897 D 316055 CDS YP_782618.1 115525707 4361401 4139760..4140797 1 NC_008435.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 4140797 4361401 RPE_3709 Rhodopseudomonas palustris BisA53 6-phosphogluconate dehydrogenase YP_782618.1 4139760 D 316055 CDS YP_782619.1 115525708 4361402 4140794..4142314 1 NC_008435.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 4142314 4361402 RPE_3710 Rhodopseudomonas palustris BisA53 glucose-6-phosphate 1-dehydrogenase YP_782619.1 4140794 D 316055 CDS YP_782620.1 115525709 4361403 4142311..4143048 1 NC_008435.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: rpc:RPC_3673 6-phosphogluconolactonase; 6-phosphogluconolactonase 4143048 4361403 RPE_3711 Rhodopseudomonas palustris BisA53 6-phosphogluconolactonase YP_782620.1 4142311 D 316055 CDS YP_782621.1 115525710 4361404 4143041..4143571 1 NC_008435.1 KEGG: rpc:RPC_3674 carbohydrate kinase, thermoresistant glucokinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; carbohydrate kinase 4143571 4361404 RPE_3712 Rhodopseudomonas palustris BisA53 carbohydrate kinase YP_782621.1 4143041 D 316055 CDS YP_782622.1 115525711 4361405 4143568..4144377 1 NC_008435.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase, type 3; KEGG: rpc:RPC_3675 Cof protein; cof family hydrolase 4144377 4361405 RPE_3713 Rhodopseudomonas palustris BisA53 cof family hydrolase YP_782622.1 4143568 D 316055 CDS YP_782623.1 115525712 4361406 complement(4144669..4146465) 1 NC_008435.1 PFAM: glycoside hydrolase 15-related; KEGG: rpc:RPC_3676 glycoside hydrolase 15-related; glycoside hydrolase 15-like protein 4146465 4361406 RPE_3714 Rhodopseudomonas palustris BisA53 glycoside hydrolase 15-like protein YP_782623.1 4144669 R 316055 CDS YP_782624.1 115525713 4361407 complement(4146470..4148422) 1 NC_008435.1 KEGG: rpc:RPC_3677 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; 4-alpha-glucanotransferase 4148422 4361407 RPE_3715 Rhodopseudomonas palustris BisA53 4-alpha-glucanotransferase YP_782624.1 4146470 R 316055 CDS YP_782625.1 115525714 4361408 4148609..4150561 1 NC_008435.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rpc:RPC_3678 alpha amylase, catalytic region; alpha amylase 4150561 4361408 RPE_3716 Rhodopseudomonas palustris BisA53 alpha amylase YP_782625.1 4148609 D 316055 CDS YP_782626.1 115525715 4361409 4150573..4153875 1 NC_008435.1 KEGG: rpc:RPC_3679 trehalose synthase-like; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; trehalose synthase 4153875 4361409 RPE_3717 Rhodopseudomonas palustris BisA53 trehalose synthase YP_782626.1 4150573 D 316055 CDS YP_782627.1 115525716 4361410 4153872..4156019 1 NC_008435.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 4156019 4361410 RPE_3718 Rhodopseudomonas palustris BisA53 glycogen branching protein YP_782627.1 4153872 D 316055 CDS YP_782628.1 115525717 4361411 4156022..4158100 1 NC_008435.1 KEGG: rpc:RPC_3681 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX 4158100 4361411 RPE_3719 Rhodopseudomonas palustris BisA53 glycogen debranching protein GlgX YP_782628.1 4156022 D 316055 CDS YP_782629.1 115525718 4361412 4158185..4159507 1 NC_008435.1 PFAM: MOFRL domain protein; KEGG: rpc:RPC_4629 hydroxypyruvate reductase; hydroxypyruvate reductase 4159507 4361412 RPE_3720 Rhodopseudomonas palustris BisA53 hydroxypyruvate reductase YP_782629.1 4158185 D 316055 CDS YP_782630.1 115525719 4361413 4159675..4162467 1 NC_008435.1 KEGG: rpc:RPC_3682 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; malto-oligosyltrehalose synthase 4162467 4361413 RPE_3721 Rhodopseudomonas palustris BisA53 malto-oligosyltrehalose synthase YP_782630.1 4159675 D 316055 CDS YP_782631.1 115525720 4361414 complement(4162761..4163072) 1 NC_008435.1 KEGG: rpc:RPC_3683 hypothetical protein; hypothetical protein 4163072 4361414 RPE_3722 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782631.1 4162761 R 316055 CDS YP_782632.1 115525721 4361415 4163237..4163401 1 NC_008435.1 KEGG: bja:blr6772 hypothetical protein; hypothetical protein 4163401 4361415 RPE_3723 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782632.1 4163237 D 316055 CDS YP_782633.1 115525722 4361416 complement(4163405..4166128) 1 NC_008435.1 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 4166128 ligD 4361416 ligD Rhodopseudomonas palustris BisA53 ATP-dependent DNA ligase YP_782633.1 4163405 R 316055 CDS YP_782634.1 115525723 4361417 4166262..4167137 1 NC_008435.1 PFAM: Ku domain protein; KEGG: rpc:RPC_3686 Ku; Ku domain-containing protein 4167137 4361417 RPE_3725 Rhodopseudomonas palustris BisA53 Ku domain-containing protein YP_782634.1 4166262 D 316055 CDS YP_782635.1 115525724 4361418 complement(4167748..4168101) 1 NC_008435.1 KEGG: rpd:RPD_3492 hypothetical protein; hypothetical protein 4168101 4361418 RPE_3726 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782635.1 4167748 R 316055 CDS YP_782636.1 115525725 4361419 complement(4168176..4168415) 1 NC_008435.1 PFAM: SirA family protein; KEGG: nha:Nham_3129 SirA-like; SirA-like protein 4168415 4361419 RPE_3727 Rhodopseudomonas palustris BisA53 SirA-like protein YP_782636.1 4168176 R 316055 CDS YP_782637.1 115525726 4361420 4168518..4169153 1 NC_008435.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4169153 mobA 4361420 mobA Rhodopseudomonas palustris BisA53 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_782637.1 4168518 D 316055 CDS YP_782638.1 115525727 4361421 complement(4169475..4170191) 1 NC_008435.1 PFAM: Urease accessory protein UreF; KEGG: rpb:RPB_1868 urease accessory protein UreF; urease accessory protein UreF 4170191 4361421 RPE_3729 Rhodopseudomonas palustris BisA53 urease accessory protein UreF YP_782638.1 4169475 R 316055 CDS YP_782639.1 115525728 4361422 complement(4170201..4170950) 1 NC_008435.1 PFAM: UreE urease accessory domain protein domain protein; UreE urease accessory domain protein; KEGG: rpb:RPB_1867 UreE urease accessory-like; UreE urease accessory domain-containing protein 4170950 4361422 RPE_3730 Rhodopseudomonas palustris BisA53 UreE urease accessory domain-containing protein YP_782639.1 4170201 R 316055 CDS YP_782640.1 115525729 4361423 complement(4170999..4171298) 1 NC_008435.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rpb:RPB_1865 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 4171298 4361423 RPE_3731 Rhodopseudomonas palustris BisA53 antibiotic biosynthesis monooxygenase YP_782640.1 4170999 R 316055 CDS YP_782641.1 115525730 4361424 complement(4172776..4174488) 1 NC_008435.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha 4174488 ureC 4361424 ureC Rhodopseudomonas palustris BisA53 urease subunit alpha YP_782641.1 4172776 R 316055 CDS YP_782642.1 115525731 4361425 complement(4174485..4175021) 1 NC_008435.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: rpa:RPA3661 metal dependent phosphohydrolase; metal dependent phosphohydrolase 4175021 4361425 RPE_3733 Rhodopseudomonas palustris BisA53 metal dependent phosphohydrolase YP_782642.1 4174485 R 316055 CDS YP_782643.1 115525732 4361426 complement(4175049..4175354) 1 NC_008435.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active; urease subunit beta 4175354 ureB 4361426 ureB Rhodopseudomonas palustris BisA53 urease subunit beta YP_782643.1 4175049 R 316055 CDS YP_782644.1 115525733 4361427 complement(4175481..4175783) 1 NC_008435.1 UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma 4175783 ureA 4361427 ureA Rhodopseudomonas palustris BisA53 urease subunit gamma YP_782644.1 4175481 R 316055 CDS YP_782645.1 115525734 4361428 complement(4175811..4176671) 1 NC_008435.1 PFAM: Urease accessory protein UreD; KEGG: bja:blr1453 urease accessory protein; urease accessory protein UreD 4176671 4361428 RPE_3736 Rhodopseudomonas palustris BisA53 urease accessory protein UreD YP_782645.1 4175811 R 316055 CDS YP_782646.1 115525735 4361429 complement(4176875..4177570) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1798 ABC transporter related; ABC transporter-like protein 4177570 4361429 RPE_3737 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782646.1 4176875 R 316055 CDS YP_782647.1 115525736 4361430 complement(4177690..4178451) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1797 ABC transporter related; ABC transporter-like protein 4178451 4361430 RPE_3738 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782647.1 4177690 R 316055 CDS YP_782648.1 115525737 4361431 complement(4178456..4179628) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpc:RPC_3700 inner-membrane translocator; inner-membrane translocator 4179628 4361431 RPE_3739 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_782648.1 4178456 R 316055 CDS YP_782649.1 115525738 4361432 complement(4179625..4181319) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpc:RPC_3701 inner-membrane translocator; inner-membrane translocator 4181319 4361432 RPE_3740 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_782649.1 4179625 R 316055 CDS YP_782650.1 115525739 4361433 complement(4181524..4182843) 1 NC_008435.1 KEGG: rpd:RPD_3510 twin-arginine translocation pathway signal; branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein 4182843 4361433 RPE_3741 Rhodopseudomonas palustris BisA53 branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein YP_782650.1 4181524 R 316055 CDS YP_782651.1 115525740 4361434 4183302..4184774 1 NC_008435.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpc:RPC_3703 DEAD/DEAH box helicase-like; DEAD/DEAH box helicase 4184774 4361434 RPE_3742 Rhodopseudomonas palustris BisA53 DEAD/DEAH box helicase YP_782651.1 4183302 D 316055 CDS YP_782652.1 115525741 4361435 4184797..4185081 1 NC_008435.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 4185081 infA 4361435 infA Rhodopseudomonas palustris BisA53 translation initiation factor IF-1 YP_782652.1 4184797 D 316055 CDS YP_782653.1 115525742 4361436 4185357..4185569 1 NC_008435.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: rpa:RPA3672 cold shock DNA binding protein; cold-shock DNA-binding domain-containing protein 4185569 4361436 RPE_3744 Rhodopseudomonas palustris BisA53 cold-shock DNA-binding domain-containing protein YP_782653.1 4185357 D 316055 CDS YP_782654.1 115525743 4361437 complement(4185697..4186338) 1 NC_008435.1 KEGG: rpc:RPC_3706 TadE-like; TadE-like protein 4186338 4361437 RPE_3745 Rhodopseudomonas palustris BisA53 TadE-like protein YP_782654.1 4185697 R 316055 CDS YP_782655.1 115525744 4361438 complement(4186349..4186861) 1 NC_008435.1 PFAM: TadE family protein; KEGG: rpb:RPB_1789 TadE-like; TadE family protein 4186861 4361438 RPE_3746 Rhodopseudomonas palustris BisA53 TadE family protein YP_782655.1 4186349 R 316055 CDS YP_782656.1 115525745 4361439 complement(4186923..4187252) 1 NC_008435.1 hypothetical protein 4187252 4361439 RPE_3747 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782656.1 4186923 R 316055 CDS YP_782657.1 115525746 4361440 4187573..4187818 1 NC_008435.1 PFAM: Flp/Fap pilin component; KEGG: rpd:RPD_3517 Flp/Fap pilin component; Flp/Fap pilin component 4187818 4361440 RPE_3748 Rhodopseudomonas palustris BisA53 Flp/Fap pilin component YP_782657.1 4187573 D 316055 CDS YP_782658.1 115525747 4361441 4188139..4188663 1 NC_008435.1 PFAM: peptidase A24A, prepilin type IV; KEGG: rpc:RPC_3711 peptidase A24A, prepilin type IV; peptidase A24A, prepilin type IV 4188663 4361441 RPE_3749 Rhodopseudomonas palustris BisA53 peptidase A24A, prepilin type IV YP_782658.1 4188139 D 316055 CDS YP_782659.1 115525748 4361442 4188785..4189069 1 NC_008435.1 KEGG: rpd:RPD_3519 Flp pilus assembly CpaB; hypothetical protein 4189069 4361442 RPE_3750 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782659.1 4188785 D 316055 CDS YP_782660.1 115525749 4361443 4189066..4190526 1 NC_008435.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: rpc:RPC_3713 type II and III secretion system protein; type II and III secretion system protein 4190526 4361443 RPE_3751 Rhodopseudomonas palustris BisA53 type II and III secretion system protein YP_782660.1 4189066 D 316055 CDS YP_782661.1 115525750 4361444 4190544..4191293 1 NC_008435.1 Caulobacter-type pilus biogenesis lipoprotein CpaD; TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; KEGG: rpc:RPC_3714 pilus assembly protein CpaD; pilus biogenesis lipoprotein CpaD 4191293 4361444 RPE_3752 Rhodopseudomonas palustris BisA53 pilus biogenesis lipoprotein CpaD YP_782661.1 4190544 D 316055 CDS YP_782662.1 115525751 4361445 4191290..4192561 1 NC_008435.1 KEGG: rpc:RPC_3715 putative pilus assembly protein CpaE; putative pilus assembly protein CpaE 4192561 4361445 RPE_3753 Rhodopseudomonas palustris BisA53 putative pilus assembly protein CpaE YP_782662.1 4191290 D 316055 CDS YP_782663.1 115525752 4361446 4192580..4194049 1 NC_008435.1 PFAM: type II secretion system protein E; KEGG: rpc:RPC_3716 type II secretion system protein E; type II secretion system protein E 4194049 4361446 RPE_3754 Rhodopseudomonas palustris BisA53 type II secretion system protein E YP_782663.1 4192580 D 316055 CDS YP_782664.1 115525753 4361447 4194061..4195035 1 NC_008435.1 PFAM: type II secretion system protein; KEGG: rpc:RPC_3717 type II secretion system protein; type II secretion system protein 4195035 4361447 RPE_3755 Rhodopseudomonas palustris BisA53 type II secretion system protein YP_782664.1 4194061 D 316055 CDS YP_782665.1 115525754 4361448 4195048..4196022 1 NC_008435.1 PFAM: type II secretion system protein; KEGG: rpc:RPC_3718 type II secretion system protein; type II secretion system protein 4196022 4361448 RPE_3756 Rhodopseudomonas palustris BisA53 type II secretion system protein YP_782665.1 4195048 D 316055 CDS YP_782666.1 115525755 4361449 complement(4196217..4197014) 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpc:RPC_3719 tetratricopeptide TPR_2; TPR repeat-containing protein 4197014 4361449 RPE_3757 Rhodopseudomonas palustris BisA53 TPR repeat-containing protein YP_782666.1 4196217 R 316055 CDS YP_782667.1 115525756 4361450 4197150..4198532 1 NC_008435.1 PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: rpc:RPC_3720 leucyl aminopeptidase; leucyl aminopeptidase 4198532 4361450 RPE_3758 Rhodopseudomonas palustris BisA53 leucyl aminopeptidase YP_782667.1 4197150 D 316055 CDS YP_782668.1 115525757 4361451 4198525..4199364 1 NC_008435.1 PFAM: NLP/P60 protein; KEGG: bja:bll1430 hypothetical protein; NLP/P60 family lipoprotein 4199364 4361451 RPE_3759 Rhodopseudomonas palustris BisA53 NLP/P60 family lipoprotein YP_782668.1 4198525 D 316055 CDS YP_782669.1 115525758 4361452 complement(4199345..4199986) 1 NC_008435.1 TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase; KEGG: rpc:RPC_3722 nucleoside diphosphate pyrophosphatase; nucleoside diphosphate pyrophosphatase 4199986 4361452 RPE_3760 Rhodopseudomonas palustris BisA53 nucleoside diphosphate pyrophosphatase YP_782669.1 4199345 R 316055 CDS YP_782670.1 115525759 4361453 complement(4199995..4201632) 1 NC_008435.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: nwi:Nwi_0292 ABC transporter, ATPase subunit; ABC transporter-like protein 4201632 4361453 RPE_3761 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782670.1 4199995 R 316055 CDS YP_782671.1 115525760 4361454 complement(4201632..4202087) 1 NC_008435.1 KEGG: rpd:RPD_3531 PilT protein-like; PilT protein-like protein 4202087 4361454 RPE_3762 Rhodopseudomonas palustris BisA53 PilT protein-like protein YP_782671.1 4201632 R 316055 CDS YP_782672.1 115525761 4361455 complement(4202078..4202323) 1 NC_008435.1 hypothetical protein 4202323 4361455 RPE_3763 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782672.1 4202078 R 316055 CDS YP_782673.1 115525762 4361456 complement(4202336..4203514) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3726 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4203514 4361456 RPE_3764 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport system inner membrane protein YP_782673.1 4202336 R 316055 CDS YP_782674.1 115525763 4361457 complement(4203514..4204623) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3727 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4204623 4361457 RPE_3765 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport systems inner membrane component YP_782674.1 4203514 R 316055 CDS YP_782675.1 115525764 4361458 complement(4204627..4206516) 1 NC_008435.1 PFAM: extracellular solute-binding protein, family 5; KEGG: rpc:RPC_3728 extracellular solute-binding protein, family 5; extracellular solute-binding protein 4206516 4361458 RPE_3766 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_782675.1 4204627 R 316055 CDS YP_782676.1 115525765 4361459 complement(4206513..4208411) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: extracellular solute-binding protein, family 5; KEGG: rpc:RPC_3729 extracellular solute-binding protein, family 5; extracellular solute-binding protein 4208411 4361459 RPE_3767 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_782676.1 4206513 R 316055 CDS YP_782677.1 115525766 4361460 complement(4208718..4209272) 1 NC_008435.1 PFAM: cytochrome c, class I; KEGG: rpc:RPC_3730 cytochrome c, class I; cytochrome c, class I 4209272 4361460 RPE_3768 Rhodopseudomonas palustris BisA53 cytochrome c, class I YP_782677.1 4208718 R 316055 CDS YP_782678.1 115525767 4361461 4209510..4210253 1 NC_008435.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 4210253 4361461 RPE_3769 Rhodopseudomonas palustris BisA53 3-deoxy-manno-octulosonate cytidylyltransferase YP_782678.1 4209510 D 316055 CDS YP_782679.1 115525768 4361462 4210298..4211158 1 NC_008435.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 4211158 4361462 RPE_3770 Rhodopseudomonas palustris BisA53 prephenate dehydratase YP_782679.1 4210298 D 316055 CDS YP_782680.1 115525769 4361463 complement(4211161..4212180) 1 NC_008435.1 PFAM: luciferase family protein; KEGG: rpc:RPC_3733 luciferase-like; luciferase-like protein 4212180 4361463 RPE_3771 Rhodopseudomonas palustris BisA53 luciferase-like protein YP_782680.1 4211161 R 316055 CDS YP_782681.1 115525770 4361464 4212603..4213499 1 NC_008435.1 KEGG: rpb:RPB_1765 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 4213499 4361464 RPE_3772 Rhodopseudomonas palustris BisA53 5,10-methylenetetrahydrofolate reductase YP_782681.1 4212603 D 316055 CDS YP_782682.1 115525771 4361465 4213503..4217384 1 NC_008435.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4217384 metH 4361465 metH Rhodopseudomonas palustris BisA53 B12-dependent methionine synthase YP_782682.1 4213503 D 316055 CDS YP_782683.1 115525772 4361466 complement(4218719..4220221) 1 NC_008435.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: rpc:RPC_2231 glycerol kinase; glycerol kinase 4220221 4361466 RPE_3774 Rhodopseudomonas palustris BisA53 glycerol kinase YP_782683.1 4218719 R 316055 CDS YP_782684.1 115525773 4361467 complement(4220574..4221716) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpb:RPB_1750 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 4221716 4361467 RPE_3775 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_782684.1 4220574 R 316055 CDS YP_782685.1 115525774 4361468 complement(4221913..4223151) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpd:RPD_3550 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 4223151 4361468 RPE_3776 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_782685.1 4221913 R 316055 CDS YP_782686.1 115525775 4361469 4223225..4224343 1 NC_008435.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 4224343 4361469 RPE_3777 Rhodopseudomonas palustris BisA53 transposase IS116/IS110/IS902 family protein YP_782686.1 4223225 D 316055 CDS YP_782687.1 115525776 4361470 complement(4224668..4225855) 1 NC_008435.1 KEGG: rpb:RPB_1748 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase 4225855 4361470 RPE_3778 Rhodopseudomonas palustris BisA53 acetyl-CoA acetyltransferase YP_782687.1 4224668 R 316055 CDS YP_782688.1 115525777 4361471 complement(4225852..4227528) 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA3716 pimeloyl-CoA ligase; AMP-dependent synthetase and ligase 4227528 4361471 RPE_3779 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_782688.1 4225852 R 316055 CDS YP_782689.1 115525778 4361472 complement(4227740..4229824) 1 NC_008435.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: rpb:RPB_1746 enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase 4229824 4361472 RPE_3780 Rhodopseudomonas palustris BisA53 3-hydroxyacyl-CoA dehydrogenase YP_782689.1 4227740 R 316055 CDS YP_782690.1 115525779 4361473 4229944..4230804 1 NC_008435.1 PFAM: regulatory proteins, IclR; KEGG: rpc:RPC_2225 transcriptional regulator, IclR family; IclR family transcriptional regulator 4230804 4361473 RPE_3781 Rhodopseudomonas palustris BisA53 IclR family transcriptional regulator YP_782690.1 4229944 D 316055 CDS YP_782691.1 115525780 4361474 4230868..4231665 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr7823 ABC transporter ATP-binding protein; ABC transporter-like protein 4231665 4361474 RPE_3782 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782691.1 4230868 D 316055 CDS YP_782692.1 115525781 4361475 4231662..4232372 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA3720 putative branched-chain amino acid transport system ATP-binding protein; ABC transporter-like protein 4232372 4361475 RPE_3783 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782692.1 4231662 D 316055 CDS YP_782693.1 115525782 4361476 4232383..4233261 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_3557 inner-membrane translocator; inner-membrane translocator 4233261 4361476 RPE_3784 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_782693.1 4232383 D 316055 CDS YP_782694.1 115525783 4361477 4233264..4234277 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_3558 inner-membrane translocator; inner-membrane translocator 4234277 4361477 RPE_3785 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_782694.1 4233264 D 316055 CDS YP_782695.1 115525784 4361478 4234434..4235687 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_3559 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4235687 4361478 RPE_3786 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_782695.1 4234434 D 316055 CDS YP_782696.1 115525785 4361479 4235852..4237087 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpa:RPA3724 possible high-affinity leucine-isoleucine-valine transport system; periplasmic binding protein; extracellular ligand-binding receptor 4237087 4361479 RPE_3787 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_782696.1 4235852 D 316055 CDS YP_782697.1 115525786 4361480 4237412..4238641 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_3562 putative leucine/isoleucine/valine-binding protein precursor; extracellular ligand-binding receptor 4238641 4361480 RPE_3788 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_782697.1 4237412 D 316055 CDS YP_782698.1 115525787 4361481 4238803..4240035 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_1898 extracellular ligand-binding receptor; extracellular ligand-binding receptor 4240035 4361481 RPE_3789 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_782698.1 4238803 D 316055 CDS YP_782699.1 115525788 4361482 complement(4240219..4240761) 1 NC_008435.1 KEGG: rpc:RPC_2223 hypothetical protein; hypothetical protein 4240761 4361482 RPE_3790 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782699.1 4240219 R 316055 CDS YP_782700.1 115525789 4361483 4240813..4242537 1 NC_008435.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: rpd:RPD_1895 sodium/hydrogen exchanger; sodium/hydrogen exchanger 4242537 4361483 RPE_3791 Rhodopseudomonas palustris BisA53 sodium/hydrogen exchanger YP_782700.1 4240813 D 316055 CDS YP_782701.1 115525790 4361484 4243137..4244825 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_1843 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4244825 4361484 RPE_3792 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_782701.1 4243137 D 316055 CDS YP_782702.1 115525791 4361485 complement(4244942..4245685) 1 NC_008435.1 KEGG: rpc:RPC_2220 putative ParA family partition protein; ParA family partition protein 4245685 4361485 RPE_3793 Rhodopseudomonas palustris BisA53 ParA family partition protein YP_782702.1 4244942 R 316055 CDS YP_782703.1 115525792 4361486 complement(4245885..4246400) 1 NC_008435.1 PFAM: regulatory protein, MarR; KEGG: rpd:RPD_1893 regulatory protein, MarR; MarR family transcriptional regulator 4246400 4361486 RPE_3794 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_782703.1 4245885 R 316055 CDS YP_782704.1 115525793 4361487 4246581..4247621 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_1892 inner-membrane translocator; inner-membrane translocator 4247621 4361487 RPE_3795 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_782704.1 4246581 D 316055 CDS YP_782705.1 115525794 4361488 4247627..4249396 1 NC_008435.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_3572 branched-chain amino acid transport system ATP-binding protein; ABC transporter-like protein 4249396 4361488 RPE_3796 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782705.1 4247627 D 316055 CDS YP_782706.1 115525795 4361489 4249393..4250136 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA1791 branched-chain amino acid transport system ATP-binding protein; ABC transporter-like protein 4250136 4361489 RPE_3797 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782706.1 4249393 D 316055 CDS YP_782707.1 115525796 4361490 4250298..4251524 1 NC_008435.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: bba:Bd0203 methyl-accepting chemotaxis protein; putative PAS/PAC sensor protein 4251524 4361490 RPE_3798 Rhodopseudomonas palustris BisA53 putative PAS/PAC sensor protein YP_782707.1 4250298 D 316055 CDS YP_782708.1 115525797 4361491 complement(4251542..4252324) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpb:RPB_3574 diguanylate cyclase; diguanylate cyclase 4252324 4361491 RPE_3799 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_782708.1 4251542 R 316055 CDS YP_782709.1 115525798 4361492 complement(4252498..4253646) 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: bja:blr7848 probable substrate-binding protein; extracellular ligand-binding receptor 4253646 4361492 RPE_3800 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_782709.1 4252498 R 316055 CDS YP_782710.1 115525799 4361493 complement(4253728..4254174) 1 NC_008435.1 PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_1888 thioesterase superfamily; thioesterase superfamily protein 4254174 4361493 RPE_3801 Rhodopseudomonas palustris BisA53 thioesterase superfamily protein YP_782710.1 4253728 R 316055 CDS YP_782711.1 115525800 4361494 complement(4254407..4256308) 1 NC_008435.1 catalyzes the conversion of ferulic acid to feruloyl-CoA; feruloyl-CoA synthase 4256308 4361494 RPE_3802 Rhodopseudomonas palustris BisA53 feruloyl-CoA synthase YP_782711.1 4254407 R 316055 CDS YP_782712.1 115525801 4361495 complement(4256308..4257114) 1 NC_008435.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4257114 4361495 RPE_3803 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase YP_782712.1 4256308 R 316055 CDS YP_782713.1 115525802 4361496 complement(4257379..4257843) 1 NC_008435.1 KEGG: rpb:RPB_3579 hypothetical protein; hypothetical protein 4257843 4361496 RPE_3804 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782713.1 4257379 R 316055 CDS YP_782714.1 115525803 4361497 complement(4257840..4259144) 1 NC_008435.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpb:RPB_3580 TRAP dicarboxylate transporter DctM subunit; TRAP C4-dicarboxylate transport system permease DctM 4259144 4361497 RPE_3805 Rhodopseudomonas palustris BisA53 TRAP C4-dicarboxylate transport system permease DctM YP_782714.1 4257840 R 316055 CDS YP_782715.1 115525804 4361498 complement(4259151..4259720) 1 NC_008435.1 KEGG: rpb:RPB_3581 TrapT family, DctQ subunit, C4-dicarboxylate transport; TRAP dicarboxylate family transporter subunit DctQ 4259720 4361498 RPE_3806 Rhodopseudomonas palustris BisA53 TRAP dicarboxylate family transporter subunit DctQ YP_782715.1 4259151 R 316055 CDS YP_782716.1 115525805 4361499 complement(4259884..4260909) 1 NC_008435.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rpb:RPB_3582 TRAP dicarboxylate transporter DctP subunit; TRAP dicarboxylate transporter subunit DctP 4260909 4361499 RPE_3807 Rhodopseudomonas palustris BisA53 TRAP dicarboxylate transporter subunit DctP YP_782716.1 4259884 R 316055 CDS YP_782717.1 115525806 4361500 4261082..4262251 1 NC_008435.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase 4262251 4361500 RPE_3808 Rhodopseudomonas palustris BisA53 4-hydroxybenzoate 3-monooxygenase YP_782717.1 4261082 D 316055 CDS YP_782718.1 115525807 4361501 complement(4262613..4263731) 1 NC_008435.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 4263731 4361501 RPE_3809 Rhodopseudomonas palustris BisA53 transposase IS116/IS110/IS902 family protein YP_782718.1 4262613 R 316055 CDS YP_782719.1 115525808 4361502 complement(4263894..4264793) 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_2218 transcriptional regulator, LysR family; LysR family transcriptional regulator 4264793 4361502 RPE_3810 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_782719.1 4263894 R 316055 CDS YP_782720.1 115525809 4361503 4264913..4265548 1 NC_008435.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: rpc:RPC_2217 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4265548 4361503 RPE_3811 Rhodopseudomonas palustris BisA53 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_782720.1 4264913 D 316055 CDS YP_782721.1 115525810 4361504 4265557..4265877 1 NC_008435.1 PFAM: protein of unknown function UPF0153; KEGG: bja:blr7852 hypothetical protein; hypothetical protein 4265877 4361504 RPE_3812 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782721.1 4265557 D 316055 CDS YP_782722.1 115525811 4361505 complement(4265882..4266289) 1 NC_008435.1 KEGG: rpc:RPC_2208 hypothetical protein; hypothetical protein 4266289 4361505 RPE_3813 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782722.1 4265882 R 316055 CDS YP_782723.1 115525812 4361507 complement(4268751..4270034) 1 NC_008435.1 PFAM: Citrate transporter; KEGG: rpc:RPC_2206 putative Na+/H+ antiporter; citrate transporter 4270034 4361507 RPE_3816 Rhodopseudomonas palustris BisA53 citrate transporter YP_782723.1 4268751 R 316055 CDS YP_782724.1 115525813 4361508 complement(4270232..4270636) 1 NC_008435.1 KEGG: rpc:RPC_2205 hypothetical protein; hypothetical protein 4270636 4361508 RPE_3817 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782724.1 4270232 R 316055 CDS YP_782725.1 115525814 4361509 complement(4270863..4271729) 1 NC_008435.1 KEGG: rpc:RPC_2204 hypothetical protein; hypothetical protein 4271729 4361509 RPE_3818 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782725.1 4270863 R 316055 CDS YP_782726.1 115525815 4361510 complement(4271742..4272410) 1 NC_008435.1 PFAM: cyclic nucleotide-binding; KEGG: rpc:RPC_2203 cyclic nucleotide-binding domain (cNMP-BD) protein; cyclic nucleotide-binding protein 4272410 4361510 RPE_3819 Rhodopseudomonas palustris BisA53 cyclic nucleotide-binding protein YP_782726.1 4271742 R 316055 CDS YP_782727.1 115525816 4361511 4272594..4273379 1 NC_008435.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpc:RPC_2202 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4273379 4361511 RPE_3820 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase/isomerase YP_782727.1 4272594 D 316055 CDS YP_782728.1 115525817 4361512 complement(4273587..4274273) 1 NC_008435.1 PFAM: nitroreductase; KEGG: rpd:RPD_3603 nitroreductase; nitroreductase 4274273 4361512 RPE_3821 Rhodopseudomonas palustris BisA53 nitroreductase YP_782728.1 4273587 R 316055 CDS YP_782729.1 115525818 4361513 complement(4274442..4275686) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpb:RPB_1689 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 4275686 4361513 RPE_3822 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_782729.1 4274442 R 316055 CDS YP_782730.1 115525819 4361514 complement(4275803..4276930) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rpc:RPC_2197 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 4276930 4361514 RPE_3823 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_782730.1 4275803 R 316055 CDS YP_782731.1 115525820 4361515 complement(4277333..4279207) 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpd:RPD_3607 AMP-dependent synthetase and ligase; acyl-CoA synthetase 4279207 4361515 RPE_3824 Rhodopseudomonas palustris BisA53 acyl-CoA synthetase YP_782731.1 4277333 R 316055 CDS YP_782732.1 115525821 4361516 complement(4279432..4280697) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: rpa:RPA1705 possible 3-hydroxyacyl-CoA dehydrogenase type II; short-chain dehydrogenase/reductase SDR 4280697 4361516 RPE_3825 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782732.1 4279432 R 316055 CDS YP_782733.1 115525822 4361517 complement(4280907..4281578) 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_2195 transcriptional regulator, TetR family; TetR family transcriptional regulator 4281578 4361517 RPE_3826 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_782733.1 4280907 R 316055 CDS YP_782734.1 115525823 4361518 4281729..4282901 1 NC_008435.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 4282901 4361518 RPE_3827 Rhodopseudomonas palustris BisA53 acetyl-CoA acetyltransferase YP_782734.1 4281729 D 316055 CDS YP_782735.1 115525824 4361519 4283089..4284633 1 NC_008435.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 4284633 4361519 RPE_3828 Rhodopseudomonas palustris BisA53 long-chain-fatty-acid--CoA ligase YP_782735.1 4283089 D 316055 CDS YP_782736.1 115525825 4361520 complement(4284649..4285104) 1 NC_008435.1 PFAM: Resolvase, N-terminal domain; KEGG: mag:amb4514 site-specific recombinase; resolvase domain-containing protein 4285104 4361520 RPE_3829 Rhodopseudomonas palustris BisA53 resolvase domain-containing protein YP_782736.1 4284649 R 316055 CDS YP_782737.1 115525826 4361521 complement(4285405..4287303) 1 NC_008435.1 TIGRFAM: outer membrane autotransporter barrel domain; PFAM: Autotransporter beta- domain protein; KEGG: rpc:RPC_4652 outer membrane autotransporter barrel; outer membrane autotransporter 4287303 4361521 RPE_3830 Rhodopseudomonas palustris BisA53 outer membrane autotransporter YP_782737.1 4285405 R 316055 CDS YP_782738.1 115525827 4361522 complement(4287513..4288115) 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:bll7902 hypothetical protein; N-acetyltransferase GCN5 4288115 4361522 RPE_3831 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_782738.1 4287513 R 316055 CDS YP_782739.1 115525828 4361523 complement(4288136..4288339) 1 NC_008435.1 PFAM: protein of unknown function DUF1127; KEGG: rpc:RPC_3736 hypothetical protein; hypothetical protein 4288339 4361523 RPE_3832 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782739.1 4288136 R 316055 CDS YP_782740.1 115525829 4361524 4288452..4289384 1 NC_008435.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 4289384 4361524 RPE_3833 Rhodopseudomonas palustris BisA53 DNA-binding transcriptional activator GcvA YP_782740.1 4288452 D 316055 CDS YP_782741.1 115525830 4361525 4289381..4289866 1 NC_008435.1 PFAM: CinA domain protein; KEGG: rpb:RPB_1678 CinA-like; CinA domain-containing protein 4289866 4361525 RPE_3834 Rhodopseudomonas palustris BisA53 CinA domain-containing protein YP_782741.1 4289381 D 316055 CDS YP_782742.1 115525831 4361526 complement(4289868..4290491) 1 NC_008435.1 KEGG: rpc:RPC_3467 propeptide, PepSY amd peptidase M4; propeptide, PepSY amd peptidase M4 4290491 4361526 RPE_3835 Rhodopseudomonas palustris BisA53 propeptide, PepSY amd peptidase M4 YP_782742.1 4289868 R 316055 CDS YP_782743.1 115525832 4361527 complement(4290537..4291139) 1 NC_008435.1 KEGG: rpc:RPC_3468 hypothetical protein; hypothetical protein 4291139 4361527 RPE_3836 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782743.1 4290537 R 316055 CDS YP_782744.1 115525833 4361528 4291320..4291925 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: pol:Bpro_5551 transcriptional regulator, TetR family; TetR family transcriptional regulator 4291925 4361528 RPE_3837 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_782744.1 4291320 D 316055 CDS YP_782745.1 115525834 4361529 4292093..4292362 1 NC_008435.1 hypothetical protein 4292362 4361529 RPE_3838 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782745.1 4292093 D 316055 CDS YP_782746.1 115525835 4361530 4292394..4292855 1 NC_008435.1 hypothetical protein 4292855 4361530 RPE_3839 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782746.1 4292394 D 316055 CDS YP_782747.1 115525836 4361531 complement(4292950..4293546) 1 NC_008435.1 PFAM: manganese and iron superoxide dismutase; KEGG: rpb:RPB_1677 superoxide dismutase; superoxide dismutase 4293546 4361531 RPE_3840 Rhodopseudomonas palustris BisA53 superoxide dismutase YP_782747.1 4292950 R 316055 CDS YP_782748.1 115525837 4361532 complement(4293639..4294880) 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3739 major facilitator superfamily MFS_1; major facilitator transporter 4294880 4361532 RPE_3841 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_782748.1 4293639 R 316055 CDS YP_782749.1 115525838 4361533 4294992..4295516 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr7775 hypothetical protein; N-acetyltransferase GCN5 4295516 4361533 RPE_3842 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_782749.1 4294992 D 316055 CDS YP_782750.1 115525839 4361534 4295618..4296991 1 NC_008435.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bja:blr7776 probable cation efflux system protein; MATE efflux family protein 4296991 4361534 RPE_3843 Rhodopseudomonas palustris BisA53 MATE efflux family protein YP_782750.1 4295618 D 316055 CDS YP_782751.1 115525840 4361535 4297182..4297616 1 NC_008435.1 KEGG: rpd:RPD_3624 hypothetical protein; hypothetical protein 4297616 4361535 RPE_3844 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782751.1 4297182 D 316055 CDS YP_782752.1 115525841 4361536 4298034..4299101 1 NC_008435.1 PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: rpb:RPB_0742 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 4299101 4361536 RPE_3845 Rhodopseudomonas palustris BisA53 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_782752.1 4298034 D 316055 CDS YP_782753.1 115525842 4361537 complement(4299285..4299584) 1 NC_008435.1 PFAM: histone family protein DNA-binding protein; KEGG: rpc:RPC_3750 histone-like DNA-binding protein; histone family protein DNA-binding protein 4299584 4361537 RPE_3846 Rhodopseudomonas palustris BisA53 histone family protein DNA-binding protein YP_782753.1 4299285 R 316055 CDS YP_782754.1 115525843 4361538 complement(4299905..4300468) 1 NC_008435.1 PFAM: Phosphoglycerate mutase; KEGG: rpc:RPC_1895 phosphoglycerate mutase; phosphoglycerate mutase 4300468 4361538 RPE_3847 Rhodopseudomonas palustris BisA53 phosphoglycerate mutase YP_782754.1 4299905 R 316055 CDS YP_782755.1 115525844 4361539 complement(4300479..4301273) 1 NC_008435.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: rpc:RPC_1894 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase 4301273 4361539 RPE_3848 Rhodopseudomonas palustris BisA53 cobalamin 5'-phosphate synthase YP_782755.1 4300479 R 316055 CDS YP_782756.1 115525845 4361540 complement(4301502..4303013) 1 NC_008435.1 SMART: AAA ATPase; KEGG: mlo:mll1902 hypothetical protein; ATPase 4303013 4361540 RPE_3849 Rhodopseudomonas palustris BisA53 ATPase YP_782756.1 4301502 R 316055 CDS YP_782757.1 115525846 4361541 complement(4303176..4303928) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_3131 ABC transporter related; ABC transporter-like protein 4303928 4361541 RPE_3850 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782757.1 4303176 R 316055 CDS YP_782758.1 115525847 4361542 complement(4303925..4304695) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_3132 ABC transporter related; ABC transporter-like protein 4304695 4361542 RPE_3851 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782758.1 4303925 R 316055 CDS YP_782759.1 115525848 4361543 complement(4304692..4305927) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_3133 inner-membrane translocator; inner-membrane translocator 4305927 4361543 RPE_3852 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_782759.1 4304692 R 316055 CDS YP_782760.1 115525849 4361544 complement(4305932..4306939) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_3134 inner-membrane translocator; inner-membrane translocator 4306939 4361544 RPE_3853 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_782760.1 4305932 R 316055 CDS YP_782761.1 115525850 4361545 complement(4307172..4308524) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_1944 twin-arginine translocation pathway signal; ABC-type branched-chain amino acid transport systems periplasmic component 4308524 4361545 RPE_3854 Rhodopseudomonas palustris BisA53 ABC-type branched-chain amino acid transport systems periplasmic component YP_782761.1 4307172 R 316055 CDS YP_782762.1 115525851 4361546 complement(4308900..4309337) 1 NC_008435.1 PFAM: histidine triad (HIT) protein; KEGG: rpd:RPD_3136 histidine triad (HIT) protein; histidine triad (HIT) protein 4309337 4361546 RPE_3855 Rhodopseudomonas palustris BisA53 histidine triad (HIT) protein YP_782762.1 4308900 R 316055 CDS YP_782763.1 115525852 4361547 4309821..4312109 1 NC_008435.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rpb:RPB_3149 TonB-dependent receptor; TonB-dependent receptor 4312109 4361547 RPE_3856 Rhodopseudomonas palustris BisA53 TonB-dependent receptor YP_782763.1 4309821 D 316055 CDS YP_782764.1 115525853 4361548 complement(4312342..4313064) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA0131 putative sulfonate transport system ATP-binding protein; ABC transporter-like protein 4313064 4361548 RPE_3857 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782764.1 4312342 R 316055 CDS YP_782765.1 115525854 4361549 complement(4313061..4313837) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA0132 ABC sulfonate transport system, permease protein; binding-protein-dependent transport system inner membrane protein 4313837 4361549 RPE_3858 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport system inner membrane protein YP_782765.1 4313061 R 316055 CDS YP_782766.1 115525855 4361550 complement(4313846..4314853) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpa:RPA0133 ABC sulfate transport system, periplasmic binding protein; ABC-type sulfonate transport system periplasmic component 4314853 4361550 RPE_3859 Rhodopseudomonas palustris BisA53 ABC-type sulfonate transport system periplasmic component YP_782766.1 4313846 R 316055 CDS YP_782767.1 115525856 4361551 complement(4315006..4316865) 1 NC_008435.1 TIGRFAM: hydrogenases, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein; KEGG: rpa:RPA0134 hydrogenase gamma-fused hydrogenase large and small subunit; hydrogenase, Fe-only 4316865 4361551 RPE_3860 Rhodopseudomonas palustris BisA53 hydrogenase, Fe-only YP_782767.1 4315006 R 316055 CDS YP_782768.1 115525857 4361552 complement(4316869..4318866) 1 NC_008435.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpa:RPA0135 possible oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4318866 4361552 RPE_3861 Rhodopseudomonas palustris BisA53 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_782768.1 4316869 R 316055 CDS YP_782769.1 115525858 4361553 4319701..4320945 1 NC_008435.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: rpc:RPC_1078 acetate kinase; acetate kinase 4320945 4361553 RPE_3862 Rhodopseudomonas palustris BisA53 acetate kinase YP_782769.1 4319701 D 316055 CDS YP_782770.1 115525859 4361554 4320999..4323140 1 NC_008435.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 4323140 4361554 RPE_3863 Rhodopseudomonas palustris BisA53 phosphate acetyltransferase YP_782770.1 4320999 D 316055 CDS YP_782771.1 115525860 4361555 4323340..4324104 1 NC_008435.1 KEGG: rpc:RPC_3846 hypothetical protein; hypothetical protein 4324104 4361555 RPE_3864 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782771.1 4323340 D 316055 CDS YP_782772.1 115525861 4361556 4324088..4325770 1 NC_008435.1 PFAM: cytochrome c oxidase, subunit II; KEGG: rpc:RPC_3849 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 4325770 4361556 RPE_3865 Rhodopseudomonas palustris BisA53 cytochrome c oxidase subunit II YP_782772.1 4324088 D 316055 CDS YP_782773.1 115525862 4361557 4325767..4328292 1 NC_008435.1 PFAM: cytochrome c oxidase, subunit I; KEGG: rpc:RPC_3850 cytochrome-c oxidase; cytochrome-c oxidase 4328292 4361557 RPE_3866 Rhodopseudomonas palustris BisA53 cytochrome-c oxidase YP_782773.1 4325767 D 316055 CDS YP_782774.1 115525863 4361558 4328298..4328651 1 NC_008435.1 KEGG: rpc:RPC_3851 hypothetical protein; hypothetical protein 4328651 4361558 RPE_3867 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782774.1 4328298 D 316055 CDS YP_782775.1 115525864 4361559 complement(4328725..4329150) 1 NC_008435.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit G 4329150 4361559 RPE_3868 Rhodopseudomonas palustris BisA53 putative monovalent cation/H+ antiporter subunit G YP_782775.1 4328725 R 316055 CDS YP_782776.1 115525865 4361560 complement(4329158..4329427) 1 NC_008435.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit F 4329427 4361560 RPE_3869 Rhodopseudomonas palustris BisA53 putative monovalent cation/H+ antiporter subunit F YP_782776.1 4329158 R 316055 CDS YP_782777.1 115525866 4361561 complement(4329424..4329912) 1 NC_008435.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit E 4329912 4361561 RPE_3870 Rhodopseudomonas palustris BisA53 putative monovalent cation/H+ antiporter subunit E YP_782777.1 4329424 R 316055 CDS YP_782778.1 115525867 4361562 complement(4329909..4331444) 1 NC_008435.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 4331444 4361562 RPE_3871 Rhodopseudomonas palustris BisA53 putative monovalent cation/H+ antiporter subunit D YP_782778.1 4329909 R 316055 CDS YP_782779.1 115525868 4361563 complement(4331441..4331809) 1 NC_008435.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit C 4331809 4361563 RPE_3872 Rhodopseudomonas palustris BisA53 putative monovalent cation/H+ antiporter subunit C YP_782779.1 4331441 R 316055 CDS YP_782780.2 162134979 4361564 complement(4331810..4334686) 1 NC_008435.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; putative monovalent cation/H+ antiporter subunit A 4334686 4361564 RPE_3873 Rhodopseudomonas palustris BisA53 putative monovalent cation/H+ antiporter subunit A YP_782780.2 4331810 R 316055 CDS YP_782781.1 115525870 4361566 4336455..4336961 1 NC_008435.1 KEGG: rpc:RPC_3619 hypothetical protein; hypothetical protein 4336961 4361566 RPE_3875 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782781.1 4336455 D 316055 CDS YP_782782.1 115525871 4361567 4336969..4339095 1 NC_008435.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rpc:RPC_3620 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 4339095 4361567 RPE_3876 Rhodopseudomonas palustris BisA53 heavy metal translocating P-type ATPase YP_782782.1 4336969 D 316055 CDS YP_782783.1 115525872 4361568 4339119..4339370 1 NC_008435.1 hypothetical protein 4339370 4361568 RPE_3877 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782783.1 4339119 D 316055 CDS YP_782784.1 115525873 4361569 complement(4339489..4340676) 1 NC_008435.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpd:RPD_1061 Nif-specific regulatory protein; Fis family transcriptional regulator 4340676 4361569 RPE_3878 Rhodopseudomonas palustris BisA53 Fis family transcriptional regulator YP_782784.1 4339489 R 316055 CDS YP_782785.1 115525874 4361570 complement(4340864..4341415) 1 NC_008435.1 KEGG: rru:Rru_A1390 hypothetical protein; hypothetical protein 4341415 4361570 RPE_3879 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782785.1 4340864 R 316055 CDS YP_782786.1 115525875 4361571 complement(4341412..4342152) 1 NC_008435.1 KEGG: rru:Rru_A1391 hypothetical protein; hypothetical protein 4342152 4361571 RPE_3880 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782786.1 4341412 R 316055 CDS YP_782787.1 115525876 4361572 complement(4342241..4343629) 1 NC_008435.1 PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpc:RPC_4681 nitrogenase; nitrogenase 4343629 4361572 RPE_3881 Rhodopseudomonas palustris BisA53 nitrogenase YP_782787.1 4342241 R 316055 CDS YP_782788.1 115525877 4361573 complement(4343640..4344068) 1 NC_008435.1 PFAM: Vanadium/alternative nitrogenase delta subunit; KEGG: rpc:RPC_4682 nitrogenase; nitrogenase 4344068 4361573 RPE_3882 Rhodopseudomonas palustris BisA53 nitrogenase YP_782788.1 4343640 R 316055 CDS YP_782789.1 115525878 4361574 complement(4344080..4345654) 1 NC_008435.1 KEGG: rpc:RPC_4683 nitrogenase alpha chain; TIGRFAM: nitrogenase alpha chain; nitrogenase component I, alpha chain; nitrogenase iron-iron protein, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase alpha chain 4345654 4361574 RPE_3883 Rhodopseudomonas palustris BisA53 nitrogenase alpha chain YP_782789.1 4344080 R 316055 CDS YP_782790.1 115525879 4361575 complement(4345719..4346546) 1 NC_008435.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; alternative NifH, may be molybdenum-independent; nitrogenase reductase 4346546 nifH 4361575 nifH Rhodopseudomonas palustris BisA53 nitrogenase reductase YP_782790.1 4345719 R 316055 CDS YP_782791.1 115525880 4361576 complement(4347045..4348703) 1 NC_008435.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rpc:RPC_0884 transcriptional regulator, NifA subfamily, fis family; NifA subfamily transcriptional regulator 4348703 4361576 RPE_3885 Rhodopseudomonas palustris BisA53 NifA subfamily transcriptional regulator YP_782791.1 4347045 R 316055 CDS YP_782792.1 115525881 4361577 complement(4348970..4349689) 1 NC_008435.1 KEGG: rpc:RPC_3754 hypothetical protein; hypothetical protein 4349689 4361577 RPE_3886 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782792.1 4348970 R 316055 CDS YP_782793.1 115525882 4361578 4349748..4351247 1 NC_008435.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: noc:Noc_0891 transcriptional regulator, GntRfamily, with aminotransferase domain; GntR family transcriptional regulator 4351247 4361578 RPE_3887 Rhodopseudomonas palustris BisA53 GntR family transcriptional regulator YP_782793.1 4349748 D 316055 CDS YP_782794.1 115525883 4361579 complement(4351299..4352138) 1 NC_008435.1 PFAM: Dinitrogenase reductase ADP-ribosyltransferase; KEGG: rpa:RPA1431 putative NAD+ ADP-ribosyltransferase; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 4352138 4361579 RPE_3888 Rhodopseudomonas palustris BisA53 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase YP_782794.1 4351299 R 316055 CDS YP_782795.1 115525884 4361580 4352493..4353485 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_1931 ABC sulfate transport system, periplasmic binding protein; ABC sulfate transport system, periplasmic binding protein 4353485 4361580 RPE_3889 Rhodopseudomonas palustris BisA53 ABC sulfate transport system, periplasmic binding protein YP_782795.1 4352493 D 316055 CDS YP_782796.1 115525885 4361581 4353485..4354321 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_1932 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4354321 4361581 RPE_3890 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport system inner membrane protein YP_782796.1 4353485 D 316055 CDS YP_782797.1 115525886 4361582 4354315..4355040 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1933 ABC transporter related; ABC transporter-like protein 4355040 4361582 RPE_3891 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782797.1 4354315 D 316055 CDS YP_782798.1 115525887 4361583 4355388..4356200 1 NC_008435.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: rpa:RPA1442 possible uridine monophosphate kinase; aspartate/glutamate/uridylate kinase 4356200 4361583 RPE_3892 Rhodopseudomonas palustris BisA53 aspartate/glutamate/uridylate kinase YP_782798.1 4355388 D 316055 CDS YP_782799.1 115525888 4361584 4356214..4357041 1 NC_008435.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: rpd:RPD_0592 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase 4357041 4361584 RPE_3893 Rhodopseudomonas palustris BisA53 aspartate/glutamate/uridylate kinase YP_782799.1 4356214 D 316055 CDS YP_782800.1 115525889 4361585 complement(4357376..4357942) 1 NC_008435.1 PFAM: cytochrome B561; KEGG: rpc:RPC_4935 cytochrome b561; cytochrome B561 4357942 4361585 RPE_3894 Rhodopseudomonas palustris BisA53 cytochrome B561 YP_782800.1 4357376 R 316055 CDS YP_782801.1 115525890 4361586 complement(4357952..4358287) 1 NC_008435.1 KEGG: rpc:RPC_4934 hypothetical protein; hypothetical protein 4358287 4361586 RPE_3895 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782801.1 4357952 R 316055 CDS YP_782802.1 115525891 4361587 4358385..4358714 1 NC_008435.1 KEGG: rpc:RPC_4933 propeptide, PepSY amd peptidase M4; hypothetical protein 4358714 4361587 RPE_3896 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782802.1 4358385 D 316055 CDS YP_782803.1 115525892 4361588 4358775..4359470 1 NC_008435.1 PFAM: protein of unknown function DUF125, transmembrane; KEGG: rpa:RPA2784 possible nodulin-related protein; hypothetical protein 4359470 4361588 RPE_3897 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782803.1 4358775 D 316055 CDS YP_782804.1 115525893 4361589 complement(4359964..4361298) 1 NC_008435.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; Ferric reductase domain protein transmembrane component, N-terminal domain; KEGG: rpc:RPC_2762 ferric reductase-like transmembrane component-like; ferric reductase domain-containing protein 4361298 4361589 RPE_3898 Rhodopseudomonas palustris BisA53 ferric reductase domain-containing protein YP_782804.1 4359964 R 316055 CDS YP_782805.1 115525894 4361590 4361445..4361687 1 NC_008435.1 hypothetical protein 4361687 4361590 RPE_3899 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782805.1 4361445 D 316055 CDS YP_782806.1 115525895 4361591 complement(4361651..4362250) 1 NC_008435.1 KEGG: bja:bll7551 hypothetical protein; hypothetical protein 4362250 4361591 RPE_3900 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782806.1 4361651 R 316055 CDS YP_782807.1 115525896 4361592 complement(4362378..4362851) 1 NC_008435.1 KEGG: rpa:RPA2786 hypothetical protein; hypothetical protein 4362851 4361592 RPE_3901 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782807.1 4362378 R 316055 CDS YP_782808.1 115525897 4361593 complement(4362928..4363092) 1 NC_008435.1 KEGG: rpc:RPC_3684 hypothetical protein; hypothetical protein 4363092 4361593 RPE_3902 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782808.1 4362928 R 316055 CDS YP_782809.1 115525898 4361594 4364256..4364531 1 NC_008435.1 PFAM: CsbD family protein; KEGG: hch:HCH_05492 hypothetical protein; CsbD family protein 4364531 4361594 RPE_3903 Rhodopseudomonas palustris BisA53 CsbD family protein YP_782809.1 4364256 D 316055 CDS YP_782810.1 115525899 4361595 complement(4365201..4366697) 1 NC_008435.1 KEGG: pfo:Pfl_2556 GCN5-related N-acetyltransferase; putative anti-sigma regulatory factor 4366697 4361595 RPE_3904 Rhodopseudomonas palustris BisA53 putative anti-sigma regulatory factor YP_782810.1 4365201 R 316055 CDS YP_782811.1 115525900 4361596 complement(4366694..4369411) 1 NC_008435.1 KEGG: cvi:CV4319 hypothetical protein; coenzyme F390 synthetase-like protein 4369411 4361596 RPE_3905 Rhodopseudomonas palustris BisA53 coenzyme F390 synthetase-like protein YP_782811.1 4366694 R 316055 CDS YP_782812.1 115525901 4361597 complement(4369427..4370566) 1 NC_008435.1 PFAM: acyl-protein synthetase, LuxE; KEGG: cvi:CV4318 long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase; acyl-protein synthetase, LuxE 4370566 4361597 RPE_3906 Rhodopseudomonas palustris BisA53 acyl-protein synthetase, LuxE YP_782812.1 4369427 R 316055 CDS YP_782813.1 115525902 4361598 complement(4370563..4371867) 1 NC_008435.1 KEGG: cvi:CV4319 hypothetical protein; coenzyme F390 synthetase-like protein 4371867 4361598 RPE_3907 Rhodopseudomonas palustris BisA53 coenzyme F390 synthetase-like protein YP_782813.1 4370563 R 316055 CDS YP_782814.1 115525903 4361599 complement(4371869..4373236) 1 NC_008435.1 KEGG: gvi:gll2007 putative phenylacetate-CoA ligase; putative phenylacetate-CoA ligase 4373236 4361599 RPE_3908 Rhodopseudomonas palustris BisA53 putative phenylacetate-CoA ligase YP_782814.1 4371869 R 316055 CDS YP_782815.1 115525904 4361600 complement(4373291..4374589) 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO2046 integral membrane efflux protein; major facilitator transporter 4374589 4361600 RPE_3909 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_782815.1 4373291 R 316055 CDS YP_782816.1 115525905 4361601 4374909..4375241 1 NC_008435.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: plt:Plut_1039 anti-anti-sigma regulatory factor, SpoIIAA; anti-sigma-factor antagonist 4375241 4361601 RPE_3910 Rhodopseudomonas palustris BisA53 anti-sigma-factor antagonist YP_782816.1 4374909 D 316055 CDS YP_782817.1 115525906 4361602 4375243..4375689 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sat:SYN_02357 anti-sigma regulatory factor; putative anti-sigma regulatory factor 4375689 4361602 RPE_3911 Rhodopseudomonas palustris BisA53 putative anti-sigma regulatory factor YP_782817.1 4375243 D 316055 CDS YP_782818.1 115525907 4361603 4375686..4376678 1 NC_008435.1 KEGG: sat:SYN_02358 ABC transporter substrate-binding protein; ABC transporter substrate-binding protein 4376678 4361603 RPE_3912 Rhodopseudomonas palustris BisA53 ABC transporter substrate-binding protein YP_782818.1 4375686 D 316055 CDS YP_782819.1 115525908 4361604 4376665..4378590 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sat:SYN_02359 serine phosphatase RsbU, regulator of sigma subunit; serine phosphatase 4378590 4361604 RPE_3913 Rhodopseudomonas palustris BisA53 serine phosphatase YP_782819.1 4376665 D 316055 CDS YP_782820.1 115525909 4361606 4379303..4380736 1 NC_008435.1 PFAM: aldehyde dehydrogenase; KEGG: rpc:RPC_3791 aldehyde dehydrogenase; aldehyde dehydrogenase 4380736 4361606 RPE_3914 Rhodopseudomonas palustris BisA53 aldehyde dehydrogenase YP_782820.1 4379303 D 316055 CDS YP_782821.1 115525910 4361607 4380835..4382442 1 NC_008435.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: rpb:RPB_3847 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 4382442 4361607 RPE_3915 Rhodopseudomonas palustris BisA53 glucose-methanol-choline oxidoreductase YP_782821.1 4380835 D 316055 CDS YP_782822.1 115525911 4361608 complement(4382591..4383352) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpc:RPC_3793 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4383352 4361608 RPE_3916 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782822.1 4382591 R 316055 CDS YP_782823.1 115525912 4361609 4383472..4383987 1 NC_008435.1 PFAM: Colicin V production protein; KEGG: rpc:RPC_3794 colicin V production protein; colicin V production protein 4383987 4361609 RPE_3917 Rhodopseudomonas palustris BisA53 colicin V production protein YP_782823.1 4383472 D 316055 CDS YP_782824.1 115525913 4361610 4384114..4384896 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_3849 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4384896 4361610 RPE_3918 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_782824.1 4384114 D 316055 CDS YP_782825.1 115525914 4361611 complement(4384956..4385588) 1 NC_008435.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rpc:RPC_3796 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 4385588 4361611 RPE_3919 Rhodopseudomonas palustris BisA53 two component LuxR family transcriptional regulator YP_782825.1 4384956 R 316055 CDS YP_782826.1 115525915 4361612 4385861..4386904 1 NC_008435.1 PFAM: Uncharacterized protein UPF0065; KEGG: rpc:RPC_3797 uncharacterized protein UPF0065; hypothetical protein 4386904 4361612 RPE_3920 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782826.1 4385861 D 316055 CDS YP_782827.1 115525916 4361613 4386990..4389527 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: rpc:RPC_3798 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase 4389527 4361613 RPE_3921 Rhodopseudomonas palustris BisA53 multi-sensor hybrid histidine kinase YP_782827.1 4386990 D 316055 CDS YP_782828.1 115525917 4361614 complement(4389578..4390828) 1 NC_008435.1 PFAM: EAL domain protein; response regulator receiver; KEGG: rpc:RPC_3799 response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain); response regulator receiver modulated diguanylate phosphodiesterase 4390828 4361614 RPE_3922 Rhodopseudomonas palustris BisA53 response regulator receiver modulated diguanylate phosphodiesterase YP_782828.1 4389578 R 316055 CDS YP_782829.1 115525918 4361615 complement(4390975..4391286) 1 NC_008435.1 KEGG: rpc:RPC_3800 hypothetical protein; hypothetical protein 4391286 4361615 RPE_3923 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782829.1 4390975 R 316055 CDS YP_782830.1 115525919 4361616 complement(4391302..4392183) 1 NC_008435.1 PFAM: MCP methyltransferase, CheR-type; KEGG: rpc:RPC_3801 MCP methyltransferase, CheR-type; chemotaxis protein CheR 4392183 4361616 RPE_3924 Rhodopseudomonas palustris BisA53 chemotaxis protein CheR YP_782830.1 4391302 R 316055 CDS YP_782831.1 115525920 4361617 complement(4392237..4392728) 1 NC_008435.1 PFAM: CheW domain protein; KEGG: rpc:RPC_3802 CheW protein; CheW protein 4392728 4361617 RPE_3925 Rhodopseudomonas palustris BisA53 CheW protein YP_782831.1 4392237 R 316055 CDS YP_782832.1 115525921 4361618 complement(4392734..4395556) 1 NC_008435.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rpc:RPC_3803 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase 4395556 4361618 RPE_3926 Rhodopseudomonas palustris BisA53 CheA signal transduction histidine kinase YP_782832.1 4392734 R 316055 CDS YP_782833.1 115525922 4361619 complement(4395715..4396068) 1 NC_008435.1 KEGG: bja:blr2933 probable aerotaxis receptor; hypothetical protein 4396068 4361619 RPE_3927 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782833.1 4395715 R 316055 CDS YP_782834.1 115525923 4361620 complement(4396291..4398309) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpb:RPB_2250 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4398309 4361620 RPE_3928 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_782834.1 4396291 R 316055 CDS YP_782835.1 115525924 4361621 complement(4398558..4400525) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_3804 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4400525 4361621 RPE_3929 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_782835.1 4398558 R 316055 CDS YP_782836.1 115525925 4361622 complement(4400761..4401264) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_3805 response regulator receiver domain protein (CheY-like); response regulator receiver protein 4401264 4361622 RPE_3930 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_782836.1 4400761 R 316055 CDS YP_782837.1 115525926 4361623 4402072..4402722 1 NC_008435.1 PFAM: transport-associated; KEGG: rpc:RPC_3808 transport-associated; transport-associated protein 4402722 4361623 RPE_3931 Rhodopseudomonas palustris BisA53 transport-associated protein YP_782837.1 4402072 D 316055 CDS YP_782838.1 115525927 4361624 complement(4402807..4404255) 1 NC_008435.1 PFAM: protein kinase; UspA domain protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rpc:RPC_3809 serine/threonine protein kinase; serine/threonine protein kinase 4404255 4361624 RPE_3932 Rhodopseudomonas palustris BisA53 serine/threonine protein kinase YP_782838.1 4402807 R 316055 CDS YP_782839.1 115525928 4361625 complement(4404258..4404998) 1 NC_008435.1 PFAM: metallophosphoesterase; KEGG: rpc:RPC_3810 metallophosphoesterase; metallophosphoesterase 4404998 4361625 RPE_3933 Rhodopseudomonas palustris BisA53 metallophosphoesterase YP_782839.1 4404258 R 316055 CDS YP_782840.1 115525929 4361626 4405286..4405714 1 NC_008435.1 KEGG: rpc:RPC_3811 hypothetical protein; hypothetical protein 4405714 4361626 RPE_3934 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782840.1 4405286 D 316055 CDS YP_782841.1 115525930 4361627 4405974..4407656 1 NC_008435.1 KEGG: rpd:RPD_1487 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 4407656 4361627 RPE_3935 Rhodopseudomonas palustris BisA53 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase YP_782841.1 4405974 D 316055 CDS YP_782842.1 115525931 4361628 4407667..4408389 1 NC_008435.1 TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase, 4VR; KEGG: rpc:RPC_3813 bacteriochlorophyll 4-vinyl reductase; bacteriochlorophyll 4-vinyl reductase 4408389 4361628 RPE_3936 Rhodopseudomonas palustris BisA53 bacteriochlorophyll 4-vinyl reductase YP_782842.1 4407667 D 316055 CDS YP_782843.1 115525932 4361629 4408432..4409784 1 NC_008435.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4409784 4361629 RPE_3937 Rhodopseudomonas palustris BisA53 coproporphyrinogen III oxidase YP_782843.1 4408432 D 316055 CDS YP_782844.1 115525933 4361630 4410043..4410330 1 NC_008435.1 KEGG: rpc:RPC_3815 hypothetical protein; hypothetical protein 4410330 4361630 RPE_3938 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782844.1 4410043 D 316055 CDS YP_782845.1 115525934 4361631 4410513..4411196 1 NC_008435.1 KEGG: rpc:RPC_3816 hypothetical protein; hypothetical protein 4411196 4361631 RPE_3939 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782845.1 4410513 D 316055 CDS YP_782846.1 115525935 4361632 complement(4411206..4411481) 1 NC_008435.1 PFAM: protein of unknown function DUF156; KEGG: rpc:RPC_3817 protein of unknown function DUF156; hypothetical protein 4411481 4361632 RPE_3940 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782846.1 4411206 R 316055 CDS YP_782847.1 115525936 4361633 4411554..4414340 1 NC_008435.1 KEGG: rpc:RPC_3818 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 4414340 4361633 RPE_3941 Rhodopseudomonas palustris BisA53 heavy metal translocating P-type ATPase YP_782847.1 4411554 D 316055 CDS YP_782848.1 115525937 4361634 4414534..4415115 1 NC_008435.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: rpc:RPC_3819 hemerythrin HHE cation binding region; hemerythrin HHE cation binding domain-containing protein 4415115 4361634 RPE_3942 Rhodopseudomonas palustris BisA53 hemerythrin HHE cation binding domain-containing protein YP_782848.1 4414534 D 316055 CDS YP_782849.1 115525938 4361635 complement(4415305..4415661) 1 NC_008435.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rpc:RPC_3820 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; putative 6-pyruvoyl tetrahydropterin synthase 4415661 4361635 RPE_3943 Rhodopseudomonas palustris BisA53 putative 6-pyruvoyl tetrahydropterin synthase YP_782849.1 4415305 R 316055 CDS YP_782850.1 115525939 4361636 4416006..4417208 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_3822 diguanylate cyclase (GGDEF domain); diguanylate cyclase 4417208 4361636 RPE_3944 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_782850.1 4416006 D 316055 CDS YP_782851.1 115525940 4361637 4417240..4417860 1 NC_008435.1 SMART: N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase 4417860 4361637 RPE_3945 Rhodopseudomonas palustris BisA53 N-acetylmuramoyl-L-alanine amidase YP_782851.1 4417240 D 316055 CDS YP_782852.1 115525941 4361638 4418076..4418447 1 NC_008435.1 KEGG: rpd:RPD_1472 hypothetical protein; hypothetical protein 4418447 4361638 RPE_3946 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782852.1 4418076 D 316055 CDS YP_782853.1 115525942 4361639 4418565..4418867 1 NC_008435.1 hypothetical protein 4418867 4361639 RPE_3947 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782853.1 4418565 D 316055 CDS YP_782854.1 115525943 4361640 complement(4418873..4419313) 1 NC_008435.1 KEGG: nha:Nham_4512 hypothetical protein; hypothetical protein 4419313 4361640 RPE_3948 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782854.1 4418873 R 316055 CDS YP_782855.1 115525944 4361641 complement(4419320..4419580) 1 NC_008435.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: nha:Nham_4513 prevent-host-death protein; prevent-host-death family protein 4419580 4361641 RPE_3949 Rhodopseudomonas palustris BisA53 prevent-host-death family protein YP_782855.1 4419320 R 316055 CDS YP_782856.1 115525945 4361642 4419796..4420155 1 NC_008435.1 KEGG: ret:RHE_PB00143 probable insertion sequence transposase protein; putative insertion sequence transposase protein 4420155 4361642 RPE_3950 Rhodopseudomonas palustris BisA53 putative insertion sequence transposase protein YP_782856.1 4419796 D 316055 CDS YP_782857.1 115525946 4361643 4420232..4420744 1 NC_008435.1 KEGG: ret:RHE_PB00142 probable insertion sequence transposase protein; putative insertion sequence transposase protein 4420744 4361643 RPE_3951 Rhodopseudomonas palustris BisA53 putative insertion sequence transposase protein YP_782857.1 4420232 D 316055 CDS YP_782858.1 115525947 4361644 complement(4420756..4421433) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA1650 putative ABC transporter, ATP-binding protein; ABC transporter-like protein 4421433 4361644 RPE_3952 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782858.1 4420756 R 316055 CDS YP_782859.1 115525948 4361645 complement(4421426..4422652) 1 NC_008435.1 PFAM: protein of unknown function DUF214; KEGG: rpa:RPA1649 predicted ABC-type transport systems, involved in lipoprotein release, permease components; hypothetical protein 4422652 4361645 RPE_3953 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782859.1 4421426 R 316055 CDS YP_782860.1 115525949 4361646 complement(4422649..4423926) 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpd:RPD_1469 secretion protein HlyD; RND family efflux transporter MFP subunit 4423926 4361646 RPE_3954 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_782860.1 4422649 R 316055 CDS YP_782861.1 115525950 4361647 4424126..4425097 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_3829 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4425097 4361647 RPE_3955 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_782861.1 4424126 D 316055 CDS YP_782862.1 115525951 4361648 4425450..4425695 1 NC_008435.1 KEGG: rpb:RPB_3885 hypothetical protein; hypothetical protein 4425695 4361648 RPE_3956 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782862.1 4425450 D 316055 CDS YP_782863.1 115525952 4361649 4425815..4426318 1 NC_008435.1 KEGG: rpc:RPC_3831 hypothetical protein; hypothetical protein 4426318 4361649 RPE_3957 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782863.1 4425815 D 316055 CDS YP_782864.1 115525953 4361650 complement(4426465..4426878) 1 NC_008435.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 4426878 4361650 RPE_3958 Rhodopseudomonas palustris BisA53 methionine sulfoxide reductase B YP_782864.1 4426465 R 316055 CDS YP_782865.1 115525954 4361651 complement(4426910..4427623) 1 NC_008435.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 4427623 4361651 RPE_3959 Rhodopseudomonas palustris BisA53 methionine sulfoxide reductase A YP_782865.1 4426910 R 316055 CDS YP_782866.1 115525955 4361652 4428232..4431561 1 NC_008435.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 4431561 carB 4361652 carB Rhodopseudomonas palustris BisA53 carbamoyl phosphate synthase large subunit YP_782866.1 4428232 D 316055 CDS YP_782867.1 115525956 4361653 4431782..4432264 1 NC_008435.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 4432264 greA 4361653 greA Rhodopseudomonas palustris BisA53 transcription elongation factor GreA YP_782867.1 4431782 D 316055 CDS YP_782868.1 115525957 4361654 4432439..4432855 1 NC_008435.1 PFAM: DoxX family protein; KEGG: rpb:RPB_1514 DoxX; DoxX family protein 4432855 4361654 RPE_3962 Rhodopseudomonas palustris BisA53 DoxX family protein YP_782868.1 4432439 D 316055 CDS YP_782869.1 115525958 4361655 complement(4432852..4433328) 1 NC_008435.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: rpc:RPC_3837 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 4433328 4361655 RPE_3963 Rhodopseudomonas palustris BisA53 AsnC family transcriptional regulator YP_782869.1 4432852 R 316055 CDS YP_782870.1 115525959 4361656 4433588..4434553 1 NC_008435.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: rpc:RPC_3838 thioredoxin reductase; thioredoxin reductase 4434553 4361656 RPE_3964 Rhodopseudomonas palustris BisA53 thioredoxin reductase YP_782870.1 4433588 D 316055 CDS YP_782871.1 115525960 4361657 4434556..4435479 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_3839 transcriptional regulator, LysR family; LysR family transcriptional regulator 4435479 4361657 RPE_3965 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_782871.1 4434556 D 316055 CDS YP_782872.1 115525961 4361658 complement(4435828..4436508) 1 NC_008435.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: rpc:RPC_3840 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 4436508 4361658 RPE_3966 Rhodopseudomonas palustris BisA53 cobyrinic acid a,c-diamide synthase YP_782872.1 4435828 R 316055 CDS YP_782873.1 115525962 4361659 complement(4436675..4437016) 1 NC_008435.1 KEGG: nwi:Nwi_2456 hypothetical protein; hypothetical protein 4437016 4361659 RPE_3967 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782873.1 4436675 R 316055 CDS YP_782874.1 115525963 4361660 complement(4437198..4437551) 1 NC_008435.1 KEGG: rpb:RPB_1508 hypothetical protein; hypothetical protein 4437551 4361660 RPE_3968 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782874.1 4437198 R 316055 CDS YP_782875.1 115525964 4361661 complement(4437622..4437915) 1 NC_008435.1 KEGG: rpb:RPB_1507 hypothetical protein; hypothetical protein 4437915 4361661 RPE_3969 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782875.1 4437622 R 316055 CDS YP_782876.1 115525965 4361662 4438170..4438769 1 NC_008435.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: ade:Adeh_0724 GPR1/FUN34/YaaH; GPR1/FUN34/yaaH family protein 4438769 4361662 RPE_3970 Rhodopseudomonas palustris BisA53 GPR1/FUN34/yaaH family protein YP_782876.1 4438170 D 316055 CDS YP_782877.1 115525966 4361663 4438815..4439366 1 NC_008435.1 PFAM: Cache, type 2 domain protein; KEGG: ade:Adeh_3161 cache domain protein; cache type 2 domain-containing protein 4439366 4361663 RPE_3971 Rhodopseudomonas palustris BisA53 cache type 2 domain-containing protein YP_782877.1 4438815 D 316055 CDS YP_782878.1 115525967 4361664 complement(4439525..4441372) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_2389 ABC transporter related; ABC transporter-like protein 4441372 4361664 RPE_3972 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_782878.1 4439525 R 316055 CDS YP_782879.1 115525968 4361665 4441545..4441940 1 NC_008435.1 KEGG: rpd:RPD_2388 hypothetical protein; hypothetical protein 4441940 4361665 RPE_3973 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782879.1 4441545 D 316055 CDS YP_782880.1 115525969 4361666 complement(4441946..4442374) 1 NC_008435.1 KEGG: rpd:RPD_2387 hypothetical protein; hypothetical protein 4442374 4361666 RPE_3974 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782880.1 4441946 R 316055 CDS YP_782881.1 115525970 4361667 complement(4442593..4442967) 1 NC_008435.1 KEGG: rpc:RPC_1925 hypothetical protein; hypothetical protein 4442967 4361667 RPE_3975 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782881.1 4442593 R 316055 CDS YP_782882.1 115525971 4361668 complement(4442961..4443575) 1 NC_008435.1 TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_2384 4-hydroxybenzoyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase 4443575 4361668 RPE_3976 Rhodopseudomonas palustris BisA53 4-hydroxybenzoyl-CoA thioesterase YP_782882.1 4442961 R 316055 CDS YP_782883.1 115525972 4361669 complement(4443694..4444230) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: rpc:RPC_1923 ubiquinol-cytochrome c reductase, iron-sulfur subunit; ubiquinol-cytochrome c reductase, iron-sulfur subunit 4444230 4361669 RPE_3977 Rhodopseudomonas palustris BisA53 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_782883.1 4443694 R 316055 CDS YP_782884.1 115525973 4361670 complement(4444316..4444921) 1 NC_008435.1 PFAM: transcriptional regulator PadR family protein; KEGG: rpc:RPC_3227 transcriptional regulator, PadR-like family; PadR-like family transcriptional regulator 4444921 4361670 RPE_3978 Rhodopseudomonas palustris BisA53 PadR-like family transcriptional regulator YP_782884.1 4444316 R 316055 CDS YP_782885.1 115525974 4361671 complement(4445101..4446027) 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_1922 transcriptional regulator, LysR family; LysR family transcriptional regulator 4446027 4361671 RPE_3979 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_782885.1 4445101 R 316055 CDS YP_782886.1 115525975 4361672 4446130..4447020 1 NC_008435.1 PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_1921 beta-lactamase-like; beta-lactamase domain-containing protein 4447020 4361672 RPE_3980 Rhodopseudomonas palustris BisA53 beta-lactamase domain-containing protein YP_782886.1 4446130 D 316055 CDS YP_782887.1 115525976 4361673 4447056..4447781 1 NC_008435.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpc:RPC_1920 peroxidase; peroxidase 4447781 4361673 RPE_3981 Rhodopseudomonas palustris BisA53 peroxidase YP_782887.1 4447056 D 316055 CDS YP_782888.1 115525977 4361674 4447878..4448666 1 NC_008435.1 PFAM: protein of unknown function DUF81; KEGG: rpc:RPC_1919 protein of unknown function DUF81; hypothetical protein 4448666 4361674 RPE_3982 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782888.1 4447878 D 316055 CDS YP_782889.1 115525978 4361675 complement(4448703..4449176) 1 NC_008435.1 PFAM: thioesterase superfamily protein; KEGG: rpd:RPD_2382 thioesterase superfamily; thioesterase superfamily protein 4449176 4361675 RPE_3983 Rhodopseudomonas palustris BisA53 thioesterase superfamily protein YP_782889.1 4448703 R 316055 CDS YP_782890.1 115525979 4361676 complement(4449322..4449696) 1 NC_008435.1 KEGG: rpd:RPD_2381 hypothetical protein; hypothetical protein 4449696 4361676 RPE_3984 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782890.1 4449322 R 316055 CDS YP_782891.1 115525980 4361677 complement(4449709..4451025) 1 NC_008435.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpd:RPD_2380 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4451025 4361677 RPE_3985 Rhodopseudomonas palustris BisA53 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_782891.1 4449709 R 316055 CDS YP_782892.1 115525981 4361678 4451779..4452906 1 NC_008435.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpc:RPC_1938 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4452906 4361678 RPE_3986 Rhodopseudomonas palustris BisA53 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_782892.1 4451779 D 316055 CDS YP_782893.1 115525982 4361679 complement(4452945..4456010) 1 NC_008435.1 PFAM: acriflavin resistance protein; KEGG: rpc:RPC_3023 acriflavin resistance protein; acriflavin resistance protein 4456010 4361679 RPE_3987 Rhodopseudomonas palustris BisA53 acriflavin resistance protein YP_782893.1 4452945 R 316055 CDS YP_782894.1 115525983 4361680 complement(4456007..4457098) 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_3024 secretion protein HlyD; RND family efflux transporter MFP subunit 4457098 4361680 RPE_3988 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_782894.1 4456007 R 316055 CDS YP_782895.1 115525984 4361681 4457348..4458064 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_3025 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4458064 4361681 RPE_3989 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_782895.1 4457348 D 316055 CDS YP_782896.1 115525985 4361682 4458103..4459296 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_3026 histidine kinase; histidine kinase 4459296 4361682 RPE_3990 Rhodopseudomonas palustris BisA53 histidine kinase YP_782896.1 4458103 D 316055 CDS YP_782897.1 115525986 4361683 complement(4459392..4460705) 1 NC_008435.1 PFAM: Patatin; KEGG: rpc:RPC_3027 patatin; patatin 4460705 4361683 RPE_3991 Rhodopseudomonas palustris BisA53 patatin YP_782897.1 4459392 R 316055 CDS YP_782898.1 115525987 4361684 complement(4460848..4461939) 1 NC_008435.1 KEGG: rpc:RPC_3028 hypothetical protein; hypothetical protein 4461939 4361684 RPE_3992 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782898.1 4460848 R 316055 CDS YP_782899.1 115525988 4361685 4462125..4462841 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_3029 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4462841 4361685 RPE_3993 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_782899.1 4462125 D 316055 CDS YP_782900.1 115525989 4361686 4463112..4464341 1 NC_008435.1 PFAM: phage integrase family protein; KEGG: rpa:RPA4082 possible phage-like integrase; phage integrase family protein 4464341 4361686 RPE_3994 Rhodopseudomonas palustris BisA53 phage integrase family protein YP_782900.1 4463112 D 316055 CDS YP_782901.1 115525990 4361687 complement(4464475..4464969) 1 NC_008435.1 KEGG: mca:MCA2964 ISMca1, transposase; hypothetical protein 4464969 4361687 RPE_3995 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782901.1 4464475 R 316055 CDS YP_782902.1 115525991 4361688 complement(4465349..4466173) 1 NC_008435.1 hypothetical protein 4466173 4361688 RPE_3996 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782902.1 4465349 R 316055 CDS YP_782903.1 115525992 4361689 complement(4466178..4467731) 1 NC_008435.1 KEGG: bpa:BPP0921 hypothetical protein; hypothetical protein 4467731 4361689 RPE_3997 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782903.1 4466178 R 316055 CDS YP_782904.1 115525993 4361690 complement(4467741..4470149) 1 NC_008435.1 hypothetical protein 4470149 4361690 RPE_3998 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782904.1 4467741 R 316055 CDS YP_782905.1 115525994 4361691 complement(4470146..4473208) 1 NC_008435.1 hypothetical protein 4473208 4361691 RPE_3999 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782905.1 4470146 R 316055 CDS YP_782906.1 115525995 4361692 complement(4473205..4474446) 1 NC_008435.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6, chymotrypsin/Hap 4474446 4361692 RPE_4000 Rhodopseudomonas palustris BisA53 peptidase S1 and S6, chymotrypsin/Hap YP_782906.1 4473205 R 316055 CDS YP_782907.1 115525996 4361693 4474655..4475353 1 NC_008435.1 KEGG: mca:MCA2145 hypothetical protein; hypothetical protein 4475353 4361693 RPE_4001 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782907.1 4474655 D 316055 CDS YP_782908.1 115525997 4361694 4475475..4475951 1 NC_008435.1 KEGG: tcr:506491.20 myosin heavy chain Pfam: DUF593 PCEMA1 DUF827 Fibrinogen_BP TolA Vicilin_N Myosin_tail_1 CASP_C GBP_C Erp_C Laminin_I PROSITE: GLU_RICH; hypothetical protein 4475951 4361694 RPE_4002 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782908.1 4475475 D 316055 CDS YP_782909.1 115525998 4361695 4476103..4477347 1 NC_008435.1 hypothetical protein 4477347 4361695 RPE_4003 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782909.1 4476103 D 316055 CDS YP_782910.1 115525999 4361696 4477344..4478327 1 NC_008435.1 hypothetical protein 4478327 4361696 RPE_4004 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782910.1 4477344 D 316055 CDS YP_782911.1 115526000 4361697 4478624..4479958 1 NC_008435.1 KEGG: rpc:RPC_1771 putative transposase; putative transposase 4479958 4361697 RPE_4005 Rhodopseudomonas palustris BisA53 putative transposase YP_782911.1 4478624 D 316055 CDS YP_782912.1 115526001 4361698 complement(4480159..4480713) 1 NC_008435.1 KEGG: afm:Afu3g07390 hypothetical protein; hypothetical protein 4480713 4361698 RPE_4006 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782912.1 4480159 R 316055 CDS YP_782913.1 115526002 4361699 complement(4480856..4486645) 1 NC_008435.1 KEGG: gme:Gmet_1193 hypothetical protein; hypothetical protein 4486645 4361699 RPE_4007 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782913.1 4480856 R 316055 CDS YP_782914.1 115526003 4361700 complement(4486642..4495791) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: gme:Gmet_1194 hypothetical protein; hypothetical protein 4495791 4361700 RPE_4008 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782914.1 4486642 R 316055 CDS YP_782915.1 115526004 4361701 4496238..4496477 1 NC_008435.1 hypothetical protein 4496477 4361701 RPE_4009 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782915.1 4496238 D 316055 CDS YP_782916.1 115526005 4361702 complement(4496450..4496692) 1 NC_008435.1 KEGG: rpc:RPC_3891 hypothetical protein; hypothetical protein 4496692 4361702 RPE_4010 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782916.1 4496450 R 316055 CDS YP_782917.1 115526006 4361703 complement(4496702..4496959) 1 NC_008435.1 PFAM: conjugation TrbI family protein; KEGG: rpc:RPC_3892 conjugation TrbI-like protein; conjugation TrbI family protein 4496959 4361703 RPE_4011 Rhodopseudomonas palustris BisA53 conjugation TrbI family protein YP_782917.1 4496702 R 316055 CDS YP_782918.1 115526007 4361704 complement(4497004..4498590) 1 NC_008435.1 PFAM: transposase IS66; KEGG: mag:amb3325 transposase and inactivated derivative; transposase IS66 4498590 4361704 RPE_4012 Rhodopseudomonas palustris BisA53 transposase IS66 YP_782918.1 4497004 R 316055 CDS YP_782919.1 115526008 4361705 complement(4498664..4499011) 1 NC_008435.1 PFAM: IS66 Orf2 family protein; KEGG: mag:amb0402 transposase and inactivated derivative; IS66 Orf2 family protein 4499011 4361705 RPE_4013 Rhodopseudomonas palustris BisA53 IS66 Orf2 family protein YP_782919.1 4498664 R 316055 CDS YP_782920.1 115526009 4361706 complement(4499008..4499346) 1 NC_008435.1 PFAM: transposase IS3/IS911 family protein; KEGG: bja:blr0034 putative transposase; transposase IS3/IS911 family protein 4499346 4361706 RPE_4014 Rhodopseudomonas palustris BisA53 transposase IS3/IS911 family protein YP_782920.1 4499008 R 316055 CDS YP_782921.1 115526010 4361707 complement(4499351..4500454) 1 NC_008435.1 PFAM: conjugation TrbI family protein; KEGG: rpc:RPC_3892 conjugation TrbI-like protein; conjugation TrbI family protein 4500454 4361707 RPE_4015 Rhodopseudomonas palustris BisA53 conjugation TrbI family protein YP_782921.1 4499351 R 316055 CDS YP_782922.1 115526011 4361708 complement(4500451..4501455) 1 NC_008435.1 PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: rpc:RPC_3893 conjugal transfer protein TrbG/VirB9/CagX; conjugal transfer protein TrbG/VirB9/CagX 4501455 4361708 RPE_4016 Rhodopseudomonas palustris BisA53 conjugal transfer protein TrbG/VirB9/CagX YP_782922.1 4500451 R 316055 CDS YP_782923.1 115526012 4361709 complement(4501452..4502132) 1 NC_008435.1 PFAM: Conjugal transfer protein; KEGG: rpc:RPC_3894 conjugal transfer protein; conjugal transfer protein TrbF 4502132 4361709 RPE_4017 Rhodopseudomonas palustris BisA53 conjugal transfer protein TrbF YP_782923.1 4501452 R 316055 CDS YP_782924.1 115526013 4361710 complement(4502132..4503307) 1 NC_008435.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 4503307 4361710 RPE_4018 Rhodopseudomonas palustris BisA53 conjugal transfer protein TrbL YP_782924.1 4502132 R 316055 CDS YP_782925.1 115526014 4361711 complement(4503307..4503672) 1 NC_008435.1 KEGG: rpc:RPC_3896 hypothetical protein; hypothetical protein 4503672 4361711 RPE_4019 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782925.1 4503307 R 316055 CDS YP_782926.1 115526015 4361712 complement(4503669..4504397) 1 NC_008435.1 KEGG: rpc:RPC_3897 putative conjugal transfer protein TrbJ; conjugal transfer protein TrbJ 4504397 4361712 RPE_4020 Rhodopseudomonas palustris BisA53 conjugal transfer protein TrbJ YP_782926.1 4503669 R 316055 CDS YP_782927.1 115526016 4361713 complement(4504394..4506835) 1 NC_008435.1 type IV secretion system VirB4 family; conjugal transfer ATPase TrbE 4506835 4361713 RPE_4021 Rhodopseudomonas palustris BisA53 conjugal transfer ATPase TrbE YP_782927.1 4504394 R 316055 CDS YP_782928.1 115526017 4361714 complement(4506860..4507141) 1 NC_008435.1 PFAM: type IV secretory pathway, VirB3 family protein; KEGG: rpc:RPC_3899 type IV secretory pathway, VirB3-like; type IV secretory pathway, VirB3 family protein 4507141 4361714 RPE_4022 Rhodopseudomonas palustris BisA53 type IV secretory pathway, VirB3 family protein YP_782928.1 4506860 R 316055 CDS YP_782929.1 115526018 4361715 complement(4507141..4507470) 1 NC_008435.1 PFAM: Conjugal transfer protein TrbC; KEGG: rpc:RPC_3900 conjugal transfer protein TrbC; conjugal transfer protein TrbC 4507470 4361715 RPE_4023 Rhodopseudomonas palustris BisA53 conjugal transfer protein TrbC YP_782929.1 4507141 R 316055 CDS YP_782930.1 115526019 4361716 complement(4507467..4508435) 1 NC_008435.1 PFAM: type II secretion system protein E; KEGG: rpc:RPC_3901 type II secretion system protein E; type II secretion system protein E 4508435 4361716 RPE_4024 Rhodopseudomonas palustris BisA53 type II secretion system protein E YP_782930.1 4507467 R 316055 CDS YP_782931.1 115526020 4361717 complement(4508574..4509014) 1 NC_008435.1 KEGG: rpc:RPC_3902 hypothetical protein; hypothetical protein 4509014 4361717 RPE_4025 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782931.1 4508574 R 316055 CDS YP_782932.1 115526021 4361718 complement(4509023..4511020) 1 NC_008435.1 type IV secretion VirD4 coupling protein family; conjugal transfer coupling protein TraG 4511020 4361718 RPE_4026 Rhodopseudomonas palustris BisA53 conjugal transfer coupling protein TraG YP_782932.1 4509023 R 316055 CDS YP_782933.1 115526022 4361719 complement(4511146..4512897) 1 NC_008435.1 KEGG: rpc:RPC_3904 hypothetical protein; hypothetical protein 4512897 4361719 RPE_4027 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782933.1 4511146 R 316055 CDS YP_782934.1 115526023 4361720 complement(4512894..4513148) 1 NC_008435.1 hypothetical protein 4513148 4361720 RPE_4028 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782934.1 4512894 R 316055 CDS YP_782935.1 115526024 4361721 complement(4513145..4514053) 1 NC_008435.1 PFAM: Lytic transglycosylase, catalytic; KEGG: rpc:RPC_3905 lytic transglycosylase, catalytic; lytic transglycosylase 4514053 4361721 RPE_4029 Rhodopseudomonas palustris BisA53 lytic transglycosylase YP_782935.1 4513145 R 316055 CDS YP_782936.1 115526025 4361722 complement(4514053..4514568) 1 NC_008435.1 KEGG: rpc:RPC_3906 conjugal transfer protein precursor; conjugal transfer protein 4514568 4361722 RPE_4030 Rhodopseudomonas palustris BisA53 conjugal transfer protein YP_782936.1 4514053 R 316055 CDS YP_782937.1 115526026 4361723 complement(4514565..4515029) 1 NC_008435.1 KEGG: rpc:RPC_3907 hypothetical protein; hypothetical protein 4515029 4361723 RPE_4031 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782937.1 4514565 R 316055 CDS YP_782938.1 115526027 4361724 complement(4515342..4516229) 1 NC_008435.1 KEGG: rpc:RPC_3908 putative replication protein A; putative replication protein A 4516229 4361724 RPE_4032 Rhodopseudomonas palustris BisA53 putative replication protein A YP_782938.1 4515342 R 316055 CDS YP_782939.1 115526028 4361725 complement(4516247..4516531) 1 NC_008435.1 KEGG: rpc:RPC_3909 putative transcriptional regulator; putative transcriptional regulator 4516531 4361725 RPE_4033 Rhodopseudomonas palustris BisA53 putative transcriptional regulator YP_782939.1 4516247 R 316055 CDS YP_782940.1 115526029 4361726 complement(4516658..4517236) 1 NC_008435.1 KEGG: rpc:RPC_3911 hypothetical protein; hypothetical protein 4517236 4361726 RPE_4034 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782940.1 4516658 R 316055 CDS YP_782941.1 115526030 4361727 complement(4517244..4517474) 1 NC_008435.1 KEGG: rpc:RPC_3912 hypothetical protein; hypothetical protein 4517474 4361727 RPE_4035 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782941.1 4517244 R 316055 CDS YP_782942.1 115526031 4361728 complement(4517593..4517871) 1 NC_008435.1 KEGG: rpc:RPC_3913 hypothetical protein; hypothetical protein 4517871 4361728 RPE_4036 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782942.1 4517593 R 316055 CDS YP_782943.1 115526032 4361729 4518025..4518279 1 NC_008435.1 PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_3914 transcriptional regulator, XRE family; XRE family transcriptional regulator 4518279 4361729 RPE_4037 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_782943.1 4518025 D 316055 CDS YP_782944.1 115526033 4361730 complement(4518431..4518754) 1 NC_008435.1 PFAM: protein of unknown function DUF736; KEGG: rpc:RPC_3915 protein of unknown function DUF736; hypothetical protein 4518754 4361730 RPE_4038 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782944.1 4518431 R 316055 CDS YP_782945.1 115526034 4361731 complement(4519324..4519974) 1 NC_008435.1 KEGG: rpc:RPC_3916 hypothetical protein; hypothetical protein 4519974 4361731 RPE_4039 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782945.1 4519324 R 316055 CDS YP_782946.1 115526035 4361732 complement(4519990..4520973) 1 NC_008435.1 KEGG: rpc:RPC_3917 hypothetical protein; hypothetical protein 4520973 4361732 RPE_4040 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782946.1 4519990 R 316055 CDS YP_782947.1 115526036 4361733 complement(4521266..4522297) 1 NC_008435.1 KEGG: rpc:RPC_3918 hypothetical protein; hypothetical protein 4522297 4361733 RPE_4041 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782947.1 4521266 R 316055 CDS YP_782948.1 115526037 4361734 complement(4522294..4526673) 1 NC_008435.1 KEGG: rpc:RPC_3919 probably methylase/helicase; methylase/helicase 4526673 4361734 RPE_4042 Rhodopseudomonas palustris BisA53 methylase/helicase YP_782948.1 4522294 R 316055 CDS YP_782949.1 115526038 4361735 complement(4526839..4528950) 1 NC_008435.1 PFAM: ParB domain protein nuclease; KEGG: rpc:RPC_3920 ParB-like nuclease; nuclease 4528950 4361735 RPE_4043 Rhodopseudomonas palustris BisA53 nuclease YP_782949.1 4526839 R 316055 CDS YP_782950.1 115526039 4361736 complement(4529078..4530028) 1 NC_008435.1 PFAM: domain of unknown function DUF1738; KEGG: rpc:RPC_3921 antirestriction protein; ArdC; hypothetical protein 4530028 4361736 RPE_4044 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782950.1 4529078 R 316055 CDS YP_782951.1 115526040 4361737 4530380..4530679 1 NC_008435.1 PFAM: histone family protein DNA-binding protein; KEGG: rpc:RPC_3750 histone-like DNA-binding protein; histone family protein DNA-binding protein 4530679 4361737 RPE_4045 Rhodopseudomonas palustris BisA53 histone family protein DNA-binding protein YP_782951.1 4530380 D 316055 CDS YP_782952.1 115526041 4361738 4530797..4531744 1 NC_008435.1 KEGG: ret:RHE_PF00101 putative aminotransferase protein; putative aminotransferase protein 4531744 4361738 RPE_4046 Rhodopseudomonas palustris BisA53 putative aminotransferase protein YP_782952.1 4530797 D 316055 CDS YP_782953.1 115526042 4361739 4531744..4535439 1 NC_008435.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: psb:Psyr_5115 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; DEAD/DEAH box helicase 4535439 4361739 RPE_4047 Rhodopseudomonas palustris BisA53 DEAD/DEAH box helicase YP_782953.1 4531744 D 316055 CDS YP_782954.1 115526043 4361740 complement(4535486..4535872) 1 NC_008435.1 PFAM: nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: nha:Nham_3765 DNA polymerase III, alpha subunit; nucleic acid binding, OB-fold, tRNA/helicase-type 4535872 4361740 RPE_4048 Rhodopseudomonas palustris BisA53 nucleic acid binding, OB-fold, tRNA/helicase-type YP_782954.1 4535486 R 316055 CDS YP_782955.1 115526044 4361741 complement(4536306..4537319) 1 NC_008435.1 KEGG: gsu:GSU2590 hypothetical protein; hypothetical protein 4537319 4361741 RPE_4049 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782955.1 4536306 R 316055 CDS YP_782956.1 115526045 4361742 complement(4537654..4538358) 1 NC_008435.1 KEGG: pcr:Pcryo_0195 hypothetical protein; hypothetical protein 4538358 4361742 RPE_4050 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782956.1 4537654 R 316055 CDS YP_782957.1 115526046 4361743 complement(4538455..4538946) 1 NC_008435.1 hypothetical protein 4538946 4361743 RPE_4051 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782957.1 4538455 R 316055 CDS YP_782958.1 115526047 4361744 4539006..4539260 1 NC_008435.1 hypothetical protein 4539260 4361744 RPE_4052 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782958.1 4539006 D 316055 CDS YP_782959.1 115526048 4361745 complement(4539451..4540488) 1 NC_008435.1 KEGG: rpc:RPC_3050 hypothetical protein; hypothetical protein 4540488 4361745 RPE_4053 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782959.1 4539451 R 316055 CDS YP_782960.1 115526049 4361746 complement(4540481..4541101) 1 NC_008435.1 KEGG: rpc:RPC_3049 hypothetical protein; hypothetical protein 4541101 4361746 RPE_4054 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782960.1 4540481 R 316055 CDS YP_782961.1 115526050 4361747 complement(4541198..4542739) 1 NC_008435.1 KEGG: dar:Daro_2234 hypothetical protein; hypothetical protein 4542739 4361747 RPE_4055 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782961.1 4541198 R 316055 CDS YP_782962.1 115526051 4361748 4542885..4544633 1 NC_008435.1 KEGG: rpd:RPD_2290 ATP-dependent endonuclease of the OLD family-like; ATP-dependent OLD family endonuclease 4544633 4361748 RPE_4056 Rhodopseudomonas palustris BisA53 ATP-dependent OLD family endonuclease YP_782962.1 4542885 D 316055 CDS YP_782963.1 115526052 4361749 4544630..4546414 1 NC_008435.1 KEGG: rpd:RPD_2289 superfamily I DNA and RNA helicases-like; superfamily I DNA/RNA helicase-like protein 4546414 4361749 RPE_4057 Rhodopseudomonas palustris BisA53 superfamily I DNA/RNA helicase-like protein YP_782963.1 4544630 D 316055 CDS YP_782964.1 115526053 4361750 4546401..4547030 1 NC_008435.1 hypothetical protein 4547030 4361750 RPE_4058 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782964.1 4546401 D 316055 CDS YP_782965.1 115526054 4361751 complement(4547105..4547374) 1 NC_008435.1 hypothetical protein 4547374 4361751 RPE_4059 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782965.1 4547105 R 316055 CDS YP_782966.1 115526055 4361752 4547817..4547957 1 NC_008435.1 KEGG: nwi:Nwi_1250 resolvase; hypothetical protein 4547957 4361752 RPE_4060 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782966.1 4547817 D 316055 CDS YP_782967.1 115526056 4361754 complement(4548283..4548720) 1 NC_008435.1 TIGRFAM: phasin family protein; phasin; KEGG: rpc:RPC_3940 phasin 2; phasin 4548720 4361754 RPE_4061 Rhodopseudomonas palustris BisA53 phasin YP_782967.1 4548283 R 316055 CDS YP_782968.1 115526057 4361755 complement(4549016..4549399) 1 NC_008435.1 TIGRFAM: phasin; KEGG: rpc:RPC_3941 phasin 2; phasin 2 4549399 4361755 RPE_4062 Rhodopseudomonas palustris BisA53 phasin 2 YP_782968.1 4549016 R 316055 CDS YP_782969.1 115526058 4361756 4549719..4553273 1 NC_008435.1 KEGG: rpc:RPC_3942 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 4553273 4361756 RPE_4063 Rhodopseudomonas palustris BisA53 PAS/PAC sensor signal transduction histidine kinase YP_782969.1 4549719 D 316055 CDS YP_782970.1 115526059 4361757 4553924..4554184 1 NC_008435.1 PFAM: Rv0623 family protein transcription factor; KEGG: rpd:RPD_1446 Rv0623-like transcription factor; transcription factor 4554184 4361757 RPE_4064 Rhodopseudomonas palustris BisA53 transcription factor YP_782970.1 4553924 D 316055 CDS YP_782971.1 115526060 4361758 4554181..4554582 1 NC_008435.1 PFAM: PilT protein domain protein; KEGG: rpd:RPD_1445 PilT protein-like; PilT domain-containing protein 4554582 4361758 RPE_4065 Rhodopseudomonas palustris BisA53 PilT domain-containing protein YP_782971.1 4554181 D 316055 CDS YP_782972.1 115526061 4361759 complement(4555054..4555473) 1 NC_008435.1 KEGG: rpa:RPA4278 hypothetical protein; hypothetical protein 4555473 4361759 RPE_4066 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782972.1 4555054 R 316055 CDS YP_782973.1 115526062 4361760 4555702..4556376 1 NC_008435.1 hypothetical protein 4556376 4361760 RPE_4067 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782973.1 4555702 D 316055 CDS YP_782974.1 115526063 4361761 4556900..4557622 1 NC_008435.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rpc:RPC_3945 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 4557622 4361761 RPE_4068 Rhodopseudomonas palustris BisA53 Crp/FNR family transcriptional regulator YP_782974.1 4556900 D 316055 CDS YP_782975.1 115526064 4361762 4558003..4559742 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_2743 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4559742 4361762 RPE_4069 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_782975.1 4558003 D 316055 CDS YP_782976.1 115526065 4361763 complement(4559796..4560053) 1 NC_008435.1 KEGG: rpc:RPC_3946 hypothetical protein; hypothetical protein 4560053 4361763 RPE_4070 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782976.1 4559796 R 316055 CDS YP_782977.1 115526066 4361764 4560262..4561362 1 NC_008435.1 KEGG: bja:blr7089 respiratory nitrite reductase; TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; nitrite reductase, copper-containing 4561362 4361764 RPE_4071 Rhodopseudomonas palustris BisA53 nitrite reductase, copper-containing YP_782977.1 4560262 D 316055 CDS YP_782978.1 115526067 4361765 4561613..4562473 1 NC_008435.1 PFAM: protein of unknown function DUF323; KEGG: bja:blr7090 probable periplasmic nitrate reductase; hypothetical protein 4562473 4361765 RPE_4072 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782978.1 4561613 D 316055 CDS YP_782979.1 115526068 4361766 4562590..4563612 1 NC_008435.1 PFAM: extracellular solute-binding protein, family 1; KEGG: rpd:RPD_1439 extracellular solute-binding protein, family 1; extracellular solute-binding protein 4563612 4361766 RPE_4073 Rhodopseudomonas palustris BisA53 extracellular solute-binding protein YP_782979.1 4562590 D 316055 CDS YP_782980.1 115526069 4361767 4563668..4565383 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3948 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4565383 4361767 RPE_4074 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport systems inner membrane component YP_782980.1 4563668 D 316055 CDS YP_782981.1 115526070 4361768 4565647..4568685 1 NC_008435.1 KEGG: ccr:CC2874 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein; multi-sensor hybrid histidine kinase 4568685 4361768 RPE_4075 Rhodopseudomonas palustris BisA53 multi-sensor hybrid histidine kinase YP_782981.1 4565647 D 316055 CDS YP_782982.1 115526071 4361769 4568890..4569507 1 NC_008435.1 KEGG: rpb:RPB_1460 hypothetical protein; hypothetical protein 4569507 4361769 RPE_4076 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782982.1 4568890 D 316055 CDS YP_782983.1 115526072 4361770 complement(4569957..4570607) 1 NC_008435.1 KEGG: rpa:RPA4155 3-oxoadipate CoA-transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 4570607 4361770 RPE_4077 Rhodopseudomonas palustris BisA53 3-oxoacid CoA-transferase subunit B YP_782983.1 4569957 R 316055 CDS YP_782984.1 115526073 4361771 complement(4570607..4571344) 1 NC_008435.1 KEGG: rpc:RPC_3950 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 4571344 4361771 RPE_4078 Rhodopseudomonas palustris BisA53 3-oxoacid CoA-transferase subunit A YP_782984.1 4570607 R 316055 CDS YP_782985.1 115526074 4361772 4571721..4573658 1 NC_008435.1 PFAM: AsmA family protein; KEGG: rpc:RPC_3951 AsmA; hypothetical protein 4573658 4361772 RPE_4079 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782985.1 4571721 D 316055 CDS YP_782986.1 115526075 4361773 4573694..4574062 1 NC_008435.1 hypothetical protein 4574062 4361773 RPE_4080 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782986.1 4573694 D 316055 CDS YP_782987.1 115526076 4361774 complement(4574089..4574907) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3952 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4574907 4361774 RPE_4081 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport system inner membrane protein YP_782987.1 4574089 R 316055 CDS YP_782988.1 115526077 4361775 complement(4574907..4575821) 1 NC_008435.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1455 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4575821 4361775 RPE_4082 Rhodopseudomonas palustris BisA53 binding-protein-dependent transport systems inner membrane component YP_782988.1 4574907 R 316055 CDS YP_782989.1 115526078 4361776 complement(4575818..4576966) 1 NC_008435.1 KEGG: rpc:RPC_3954 spermidine/putrescine ABC transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATP-binding subunit 4576966 4361776 RPE_4083 Rhodopseudomonas palustris BisA53 spermidine/putrescine ABC transporter ATP-binding subunit YP_782989.1 4575818 R 316055 CDS YP_782990.1 115526079 4361777 complement(4577098..4579782) 1 NC_008435.1 KEGG: rpc:RPC_3955 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4579782 4361777 RPE_4084 Rhodopseudomonas palustris BisA53 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_782990.1 4577098 R 316055 CDS YP_782991.1 115526080 4361778 4579978..4581084 1 NC_008435.1 PFAM: FAD dependent oxidoreductase; KEGG: rpc:RPC_3956 FAD dependent oxidoreductase; FAD dependent oxidoreductase 4581084 4361778 RPE_4085 Rhodopseudomonas palustris BisA53 FAD dependent oxidoreductase YP_782991.1 4579978 D 316055 CDS YP_782992.1 115526081 4361779 complement(4581366..4581551) 1 NC_008435.1 KEGG: rpc:RPC_3957 hypothetical protein; hypothetical protein 4581551 4361779 RPE_4086 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782992.1 4581366 R 316055 CDS YP_782993.1 115526082 4361780 4581889..4582098 1 NC_008435.1 PFAM: protein of unknown function DUF465; KEGG: rpd:RPD_1426 protein of unknown function DUF465; hypothetical protein 4582098 4361780 RPE_4087 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782993.1 4581889 D 316055 CDS YP_782994.1 115526083 4361781 complement(4582103..4582804) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpc:RPC_3959 diguanylate cyclase (GGDEF domain); diguanylate cyclase 4582804 4361781 RPE_4088 Rhodopseudomonas palustris BisA53 diguanylate cyclase YP_782994.1 4582103 R 316055 CDS YP_782995.1 115526084 4361782 4582925..4583413 1 NC_008435.1 KEGG: rpa:RPA4174 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 4583413 4361782 RPE_4089 Rhodopseudomonas palustris BisA53 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_782995.1 4582925 D 316055 CDS YP_782996.1 115526085 4361783 4583410..4584522 1 NC_008435.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 4584522 4361783 RPE_4090 Rhodopseudomonas palustris BisA53 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_782996.1 4583410 D 316055 CDS YP_782997.1 115526086 4361784 4584701..4585000 1 NC_008435.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 4585000 rpsU 4361784 rpsU Rhodopseudomonas palustris BisA53 30S ribosomal protein S21 YP_782997.1 4584701 D 316055 CDS YP_782998.1 115526087 4361785 complement(4585168..4585479) 1 NC_008435.1 PFAM: type IV pilus assembly PilZ; type IV pilus assembly PilZ 4585479 4361785 RPE_4092 Rhodopseudomonas palustris BisA53 type IV pilus assembly PilZ YP_782998.1 4585168 R 316055 CDS YP_782999.1 115526088 4361786 complement(4585575..4586651) 1 NC_008435.1 KEGG: bja:bll6535 hypothetical protein; hypothetical protein 4586651 4361786 RPE_4093 Rhodopseudomonas palustris BisA53 hypothetical protein YP_782999.1 4585575 R 316055 CDS YP_783000.1 115526089 4361787 complement(4587139..4587987) 1 NC_008435.1 KEGG: rpc:RPC_3963 hypothetical protein; hypothetical protein 4587987 4361787 RPE_4094 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783000.1 4587139 R 316055 CDS YP_783001.1 115526090 4361788 complement(4588163..4589212) 1 NC_008435.1 PFAM: sodium/calcium exchanger membrane region; KEGG: rpc:RPC_3965 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane region 4589212 4361788 RPE_4095 Rhodopseudomonas palustris BisA53 sodium/calcium exchanger membrane region YP_783001.1 4588163 R 316055 CDS YP_783002.1 115526091 4361789 complement(4589487..4590887) 1 NC_008435.1 PFAM: NAD(P) transhydrogenase, beta subunit; KEGG: rpc:RPC_3966 NAD(P) transhydrogenase, beta subunit; NAD(P) transhydrogenase subunit beta 4590887 4361789 RPE_4096 Rhodopseudomonas palustris BisA53 NAD(P) transhydrogenase subunit beta YP_783002.1 4589487 R 316055 CDS YP_783003.1 115526092 4361790 complement(4590901..4591218) 1 NC_008435.1 KEGG: rpc:RPC_3967 NAD(P) transhydrogenase subunit alpha part; nicotinamide nucleotide transhydrogenase subunit alpha2 4591218 4361790 RPE_4097 Rhodopseudomonas palustris BisA53 nicotinamide nucleotide transhydrogenase subunit alpha2 YP_783003.1 4590901 R 316055 CDS YP_783004.1 115526093 4361791 complement(4591230..4592360) 1 NC_008435.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rpc:RPC_3968 NAD(P)(+) transhydrogenase (AB-specific); NAD(P)(+) transhydrogenase 4592360 4361791 RPE_4098 Rhodopseudomonas palustris BisA53 NAD(P)(+) transhydrogenase YP_783004.1 4591230 R 316055 CDS YP_783005.1 115526094 4361792 complement(4592445..4592597) 1 NC_008435.1 PFAM: aa3 type cytochrome c oxidase subunit IV; KEGG: rpc:RPC_3969 aa3 type cytochrome c oxidase subunit IV; aa3 type cytochrome c oxidase subunit IV 4592597 4361792 RPE_4099 Rhodopseudomonas palustris BisA53 aa3 type cytochrome c oxidase subunit IV YP_783005.1 4592445 R 316055 CDS YP_783006.1 115526095 4361793 complement(4592856..4593239) 1 NC_008435.1 TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rpb:RPB_1433 death-on-curing protein; death-on-curing family protein 4593239 4361793 RPE_4100 Rhodopseudomonas palustris BisA53 death-on-curing family protein YP_783006.1 4592856 R 316055 CDS YP_783007.1 115526096 4361794 complement(4593262..4593516) 1 NC_008435.1 TIGRFAM: putative addiction module antidote; PFAM: SpoVT/AbrB domain protein; KEGG: rpd:RPD_1412 SpoVT/AbrB-like; transcriptional regulator/antitoxin MazE 4593516 4361794 RPE_4101 Rhodopseudomonas palustris BisA53 transcriptional regulator/antitoxin MazE YP_783007.1 4593262 R 316055 CDS YP_783008.1 115526097 4361795 complement(4593620..4595527) 1 NC_008435.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; Oligopeptidase F; KEGG: rpc:RPC_3974 peptidase M3B, oligoendopeptidase-related clade 3; pepF/M3 family oligoendopeptidase 4595527 4361795 RPE_4102 Rhodopseudomonas palustris BisA53 pepF/M3 family oligoendopeptidase YP_783008.1 4593620 R 316055 CDS YP_783009.1 115526098 4361796 4595785..4596474 1 NC_008435.1 PFAM: Integral membrane protein TerC; KEGG: rpc:RPC_3975 integral membrane protein TerC; integral membrane protein TerC 4596474 4361796 RPE_4103 Rhodopseudomonas palustris BisA53 integral membrane protein TerC YP_783009.1 4595785 D 316055 CDS YP_783010.1 115526099 4361797 4596537..4598024 1 NC_008435.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: rpc:RPC_3976 two component, sigma54 specific, transcriptional regulator, fis family; two component sigma54 specific Fis family transcriptional regulator 4598024 4361797 RPE_4104 Rhodopseudomonas palustris BisA53 two component sigma54 specific Fis family transcriptional regulator YP_783010.1 4596537 D 316055 CDS YP_783011.1 115526100 4361798 4598308..4600425 1 NC_008435.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rpc:RPC_3977 peptidoglycan-binding domain 1; peptidoglycan binding domain-containing protein 4600425 4361798 RPE_4105 Rhodopseudomonas palustris BisA53 peptidoglycan binding domain-containing protein YP_783011.1 4598308 D 316055 CDS YP_783012.1 115526101 4361799 4600717..4602336 1 NC_008435.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: rpc:RPC_3978 protein of unknown function DUF882; hypothetical protein 4602336 4361799 RPE_4106 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783012.1 4600717 D 316055 CDS YP_783013.1 115526102 4361800 complement(4602530..4602799) 1 NC_008435.1 KEGG: rpc:RPC_3979 hypothetical protein; hypothetical protein 4602799 4361800 RPE_4107 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783013.1 4602530 R 316055 CDS YP_783014.1 115526103 4361801 complement(4603014..4603313) 1 NC_008435.1 PFAM: protein of unknown function DUF1244; KEGG: rpb:RPB_1425 protein of unknown function DUF1244; hypothetical protein 4603313 4361801 RPE_4108 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783014.1 4603014 R 316055 CDS YP_783015.1 115526104 4361802 4603517..4604107 1 NC_008435.1 PFAM: protein of unknown function DUF1036; KEGG: rpc:RPC_3981 protein of unknown function DUF1036; hypothetical protein 4604107 4361802 RPE_4109 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783015.1 4603517 D 316055 CDS YP_783016.1 115526105 4361803 4604104..4605537 1 NC_008435.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 4605537 4361803 RPE_4110 Rhodopseudomonas palustris BisA53 pyruvate kinase YP_783016.1 4604104 D 316055 CDS YP_783017.1 115526106 4361804 complement(4605562..4605999) 1 NC_008435.1 PFAM: protein of unknown function UPF0150; KEGG: rpb:RPB_1422 protein of unknown function UPF0150; hypothetical protein 4605999 4361804 RPE_4111 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783017.1 4605562 R 316055 CDS YP_783018.1 115526107 4361805 complement(4606034..4606462) 1 NC_008435.1 PFAM: OsmC family protein; KEGG: rpc:RPC_3986 OsmC-like protein; OsmC-like protein 4606462 4361805 RPE_4112 Rhodopseudomonas palustris BisA53 OsmC-like protein YP_783018.1 4606034 R 316055 CDS YP_783019.1 115526108 4361806 complement(4606516..4607472) 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_3987 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4607472 4361806 RPE_4113 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_783019.1 4606516 R 316055 CDS YP_783020.1 115526109 4361807 complement(4607546..4608211) 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpc:RPC_3988 tetratricopeptide TPR_2; TPR repeat-containing protein 4608211 4361807 RPE_4114 Rhodopseudomonas palustris BisA53 TPR repeat-containing protein YP_783020.1 4607546 R 316055 CDS YP_783021.1 115526110 4361808 complement(4608328..4608453) 1 NC_008435.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 4608453 rpmJ 4361808 rpmJ Rhodopseudomonas palustris BisA53 50S ribosomal protein L36 YP_783021.1 4608328 R 316055 CDS YP_783022.1 115526111 4361809 4608774..4609313 1 NC_008435.1 hypothetical protein 4609313 4361809 RPE_4116 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783022.1 4608774 D 316055 CDS YP_783023.1 115526112 4361810 complement(4609354..4610319) 1 NC_008435.1 PFAM: Uncharacterized protein UPF0065; KEGG: rpc:RPC_3993 uncharacterized protein UPF0065; hypothetical protein 4610319 4361810 RPE_4117 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783023.1 4609354 R 316055 CDS YP_783024.1 115526113 4361811 complement(4610348..4610794) 1 NC_008435.1 PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_3994 MaoC-like dehydratase; dehydratase 4610794 4361811 RPE_4118 Rhodopseudomonas palustris BisA53 dehydratase YP_783024.1 4610348 R 316055 CDS YP_783025.1 115526114 4361812 complement(4610861..4611331) 1 NC_008435.1 PFAM: MaoC domain protein dehydratase; KEGG: rpc:RPC_3995 hypothetical protein; dehydratase 4611331 4361812 RPE_4119 Rhodopseudomonas palustris BisA53 dehydratase YP_783025.1 4610861 R 316055 CDS YP_783026.1 115526115 4361813 4611440..4612210 1 NC_008435.1 PFAM: regulatory proteins, IclR; KEGG: rpc:RPC_3996 transcriptional regulator, IclR family; IclR family transcriptional regulator 4612210 4361813 RPE_4120 Rhodopseudomonas palustris BisA53 IclR family transcriptional regulator YP_783026.1 4611440 D 316055 CDS YP_783027.1 115526116 4361814 4612295..4613170 1 NC_008435.1 PFAM: amidohydrolase 2; KEGG: rpb:RPB_1417 amidohydrolase 2; amidohydrolase 2 4613170 4361814 RPE_4121 Rhodopseudomonas palustris BisA53 amidohydrolase 2 YP_783027.1 4612295 D 316055 CDS YP_783028.1 115526117 4361815 4613174..4613647 1 NC_008435.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rpc:RPC_3997 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 4613647 4361815 RPE_4122 Rhodopseudomonas palustris BisA53 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_783028.1 4613174 D 316055 CDS YP_783029.1 115526118 4361816 complement(4613695..4613943) 1 NC_008435.1 KEGG: rpc:RPC_3999 hypothetical protein; hypothetical protein 4613943 4361816 RPE_4123 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783029.1 4613695 R 316055 CDS YP_783030.1 115526119 4361817 complement(4613956..4614168) 1 NC_008435.1 KEGG: rpc:RPC_4000 hypothetical protein; hypothetical protein 4614168 4361817 RPE_4124 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783030.1 4613956 R 316055 CDS YP_783031.1 115526120 4361818 4614366..4615751 1 NC_008435.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; KEGG: rpc:RPC_4001 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 4615751 4361818 RPE_4125 Rhodopseudomonas palustris BisA53 polysaccharide biosynthesis protein YP_783031.1 4614366 D 316055 CDS YP_783032.1 115526121 4361819 complement(4615770..4617044) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA1762 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4617044 4361819 RPE_4126 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_783032.1 4615770 R 316055 CDS YP_783033.1 115526122 4361820 4617248..4618027 1 NC_008435.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4618027 4361820 RPE_4127 Rhodopseudomonas palustris BisA53 enoyl-CoA hydratase YP_783033.1 4617248 D 316055 CDS YP_783034.1 115526123 4361821 complement(4618142..4618603) 1 NC_008435.1 PFAM: ribonuclease H; KEGG: rpc:RPC_4076 ribonuclease H; ribonuclease H 4618603 4361821 RPE_4128 Rhodopseudomonas palustris BisA53 ribonuclease H YP_783034.1 4618142 R 316055 CDS YP_783035.1 115526124 4361822 complement(4618600..4619580) 1 NC_008435.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 4619580 4361822 RPE_4129 Rhodopseudomonas palustris BisA53 homoserine kinase YP_783035.1 4618600 R 316055 CDS YP_783036.1 115526125 4361823 complement(4619586..4620548) 1 NC_008435.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4620548 ispH 4361823 ispH Rhodopseudomonas palustris BisA53 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_783036.1 4619586 R 316055 CDS YP_783037.1 115526126 4361824 4620838..4621572 1 NC_008435.1 PFAM: protein of unknown function DUF1013; KEGG: rpa:RPA4272 hypothetical protein; hypothetical protein 4621572 4361824 RPE_4131 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783037.1 4620838 D 316055 CDS YP_783038.1 115526127 4361826 complement(4621867..4622181) 1 NC_008435.1 KEGG: rpc:RPC_4080 hypothetical protein; hypothetical protein 4622181 4361826 RPE_4133 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783038.1 4621867 R 316055 CDS YP_783039.1 115526128 4361827 4624203..4624619 1 NC_008435.1 PFAM: phosphate-starvation-inducible E; KEGG: rpc:RPC_4082 phosphate-starvation-inducible E; phosphate-starvation-inducible E 4624619 4361827 RPE_4134 Rhodopseudomonas palustris BisA53 phosphate-starvation-inducible E YP_783039.1 4624203 D 316055 CDS YP_783040.1 115526129 4361828 4625028..4625333 1 NC_008435.1 KEGG: rpc:RPC_1806 hypothetical protein; hypothetical protein 4625333 4361828 RPE_4135 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783040.1 4625028 D 316055 CDS YP_783041.1 115526130 4361829 4625479..4625763 1 NC_008435.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rfr:Rfer_0623 prevent-host-death protein; prevent-host-death family protein 4625763 4361829 RPE_4136 Rhodopseudomonas palustris BisA53 prevent-host-death family protein YP_783041.1 4625479 D 316055 CDS YP_783042.1 115526131 4361830 4625760..4626203 1 NC_008435.1 PFAM: PilT protein domain protein; KEGG: bja:bll2434 plasmid stability protein; PilT domain-containing protein 4626203 4361830 RPE_4137 Rhodopseudomonas palustris BisA53 PilT domain-containing protein YP_783042.1 4625760 D 316055 CDS YP_783043.1 115526132 4361831 4626288..4626629 1 NC_008435.1 KEGG: rpb:RPB_1318 hypothetical protein; hypothetical protein 4626629 4361831 RPE_4138 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783043.1 4626288 D 316055 CDS YP_783044.1 115526133 4361832 4626797..4627012 1 NC_008435.1 KEGG: rpc:RPC_4084 hypothetical protein; hypothetical protein 4627012 4361832 RPE_4139 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783044.1 4626797 D 316055 CDS YP_783045.1 115526134 4361833 complement(4627373..4628920) 1 NC_008435.1 KEGG: rpc:RPC_4085 hypothetical protein; hypothetical protein 4628920 4361833 RPE_4140 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783045.1 4627373 R 316055 CDS YP_783046.1 115526135 4361834 complement(4629070..4630362) 1 NC_008435.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 4630362 4361834 RPE_4141 Rhodopseudomonas palustris BisA53 adenylosuccinate synthetase YP_783046.1 4629070 R 316055 CDS YP_783047.1 115526136 4361835 4630756..4631067 1 NC_008435.1 KEGG: nha:Nham_4658 hypothetical protein; hypothetical protein 4631067 4361835 RPE_4142 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783047.1 4630756 D 316055 CDS YP_783048.1 115526137 4361836 4631069..4631473 1 NC_008435.1 SMART: helix-turn-helix domain protein; KEGG: nha:Nham_4657 transcriptional regulator, XRE family; XRE family transcriptional regulator 4631473 4361836 RPE_4143 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_783048.1 4631069 D 316055 CDS YP_783049.1 115526138 4361837 complement(4631563..4632687) 1 NC_008435.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: rpc:RPC_1749 NapC/NirT cytochrome c-like; NapC/NirT cytochrome c domain-containing protein 4632687 4361837 RPE_4144 Rhodopseudomonas palustris BisA53 NapC/NirT cytochrome c domain-containing protein YP_783049.1 4631563 R 316055 CDS YP_783050.1 115526139 4361838 complement(4632842..4633837) 1 NC_008435.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: rpc:RPC_1205 cytochrome-c peroxidase; cytochrome-c peroxidase 4633837 4361838 RPE_4145 Rhodopseudomonas palustris BisA53 cytochrome-c peroxidase YP_783050.1 4632842 R 316055 CDS YP_783051.1 115526140 4361839 complement(4634148..4636823) 1 NC_008435.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpa:RPA2957 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL); PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4636823 4361839 RPE_4146 Rhodopseudomonas palustris BisA53 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_783051.1 4634148 R 316055 CDS YP_783052.1 115526141 4361840 complement(4637010..4638611) 1 NC_008435.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rpc:RPC_4088 beta-lactamase-like; beta-lactamase domain-containing protein 4638611 4361840 RPE_4147 Rhodopseudomonas palustris BisA53 beta-lactamase domain-containing protein YP_783052.1 4637010 R 316055 CDS YP_783053.1 115526142 4361841 complement(4638608..4639516) 1 NC_008435.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 4639516 4361841 RPE_4148 Rhodopseudomonas palustris BisA53 phosphoribosylpyrophosphate synthetase YP_783053.1 4638608 R 316055 CDS YP_783054.1 115526143 4361842 complement(4639513..4641054) 1 NC_008435.1 catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase 4641054 4361842 RPE_4149 Rhodopseudomonas palustris BisA53 thymidine phosphorylase YP_783054.1 4639513 R 316055 CDS YP_783055.1 115526144 4361843 4641295..4641828 1 NC_008435.1 KEGG: rpc:RPC_4090 hypothetical protein; hypothetical protein 4641828 4361843 RPE_4150 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783055.1 4641295 D 316055 CDS YP_783056.1 115526145 4361844 4641962..4642783 1 NC_008435.1 PFAM: aldo/keto reductase; KEGG: rpd:RPD_3895 aldo/keto reductase; aldo/keto reductase 4642783 4361844 RPE_4151 Rhodopseudomonas palustris BisA53 aldo/keto reductase YP_783056.1 4641962 D 316055 CDS YP_783057.1 115526146 4361845 4642936..4643412 1 NC_008435.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rpc:RPC_4093 hypothetical protein; ybaK/ebsC protein 4643412 4361845 RPE_4152 Rhodopseudomonas palustris BisA53 ybaK/ebsC protein YP_783057.1 4642936 D 316055 CDS YP_783058.1 115526147 4361846 4644013..4644945 1 NC_008435.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: rpd:RPD_3897 protein of unknown function DUF6, transmembrane; hypothetical protein 4644945 4361846 RPE_4153 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783058.1 4644013 D 316055 CDS YP_783059.1 115526148 4361847 complement(4645050..4646729) 1 NC_008435.1 KEGG: rpc:RPC_4100 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 4646729 4361847 RPE_4154 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_783059.1 4645050 R 316055 CDS YP_783060.1 115526149 4361848 complement(4647092..4649188) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4101 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4649188 4361848 RPE_4155 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783060.1 4647092 R 316055 CDS YP_783061.1 115526150 4361849 complement(4649539..4650522) 1 NC_008435.1 PFAM: Rubrerythrin; protein of unknown function DUF125, transmembrane; KEGG: rpd:RPD_3902 rubrerythrin; rubrerythrin 4650522 4361849 RPE_4156 Rhodopseudomonas palustris BisA53 rubrerythrin YP_783061.1 4649539 R 316055 CDS YP_783062.1 115526151 4361850 4650679..4652034 1 NC_008435.1 KEGG: rpd:RPD_3903 hypothetical protein; hypothetical protein 4652034 4361850 RPE_4157 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783062.1 4650679 D 316055 CDS YP_783063.1 115526152 4361851 complement(4652174..4653889) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_4105 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4653889 4361851 RPE_4158 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783063.1 4652174 R 316055 CDS YP_783064.1 115526153 4361852 complement(4654054..4655739) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: rpc:RPC_4104 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4655739 4361852 RPE_4159 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783064.1 4654054 R 316055 CDS YP_783065.1 115526154 4361853 complement(4655977..4657569) 1 NC_008435.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 4657569 4361853 RPE_4160 Rhodopseudomonas palustris BisA53 D-3-phosphoglycerate dehydrogenase YP_783065.1 4655977 R 316055 CDS YP_783066.1 115526155 4361854 complement(4657772..4658944) 1 NC_008435.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 4658944 4361854 RPE_4161 Rhodopseudomonas palustris BisA53 phosphoserine aminotransferase YP_783066.1 4657772 R 316055 CDS YP_783067.1 115526156 4361855 complement(4659339..4659584) 1 NC_008435.1 hypothetical protein 4659584 4361855 RPE_4162 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783067.1 4659339 R 316055 CDS YP_783068.1 115526157 4361856 complement(4659725..4660198) 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_4109 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4660198 4361856 RPE_4163 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_783068.1 4659725 R 316055 CDS YP_783069.1 115526158 4361857 complement(4660215..4660802) 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rpa:RPA4314 possible glutathione S-transferase; glutathione S-transferase 4660802 4361857 RPE_4164 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_783069.1 4660215 R 316055 CDS YP_783070.1 115526159 4361858 complement(4660863..4661654) 1 NC_008435.1 KEGG: rpa:RPA4315 hypothetical protein; hypothetical protein 4661654 4361858 RPE_4165 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783070.1 4660863 R 316055 CDS YP_783071.1 115526160 4361859 complement(4661800..4662633) 1 NC_008435.1 KEGG: rpd:RPD_3912 hypothetical protein; hypothetical protein 4662633 4361859 RPE_4166 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783071.1 4661800 R 316055 CDS YP_783072.1 115526161 4361860 complement(4662889..4664091) 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpa:RPA4317 putative fosmidomycin resistance protein; major facilitator transporter 4664091 4361860 RPE_4167 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_783072.1 4662889 R 316055 CDS YP_783073.1 115526162 4361861 complement(4664284..4665636) 1 NC_008435.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 4665636 glmM 4361861 glmM Rhodopseudomonas palustris BisA53 phosphoglucosamine mutase YP_783073.1 4664284 R 316055 CDS YP_783074.1 115526163 4361862 complement(4665868..4666026) 1 NC_008435.1 KEGG: rpc:RPC_4114 hypothetical protein; hypothetical protein 4666026 4361862 RPE_4169 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783074.1 4665868 R 316055 CDS YP_783075.1 115526164 4361863 4666190..4667329 1 NC_008435.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: rpd:RPD_3916 L-lactate dehydrogenase (cytochrome); L-lactate dehydrogenase (cytochrome) 4667329 4361863 RPE_4170 Rhodopseudomonas palustris BisA53 L-lactate dehydrogenase (cytochrome) YP_783075.1 4666190 D 316055 CDS YP_783076.1 115526165 4361864 complement(4667512..4668381) 1 NC_008435.1 KEGG: rpc:RPC_4117 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding, N-terminal domain protein; shikimate 5-dehydrogenase 4668381 4361864 RPE_4171 Rhodopseudomonas palustris BisA53 shikimate 5-dehydrogenase YP_783076.1 4667512 R 316055 CDS YP_783077.1 115526166 4361865 complement(4668378..4668632) 1 NC_008435.1 PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_4118 transcriptional regulator, XRE family; XRE family transcriptional regulator 4668632 4361865 RPE_4172 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_783077.1 4668378 R 316055 CDS YP_783078.1 115526167 4361866 complement(4668746..4670794) 1 NC_008435.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 4670794 4361866 RPE_4173 Rhodopseudomonas palustris BisA53 elongation factor G YP_783078.1 4668746 R 316055 CDS YP_783079.1 115526168 4361867 complement(4671015..4671488) 1 NC_008435.1 PFAM: protein of unknown function DUF992; KEGG: rpc:RPC_4120 protein of unknown function DUF992; hypothetical protein 4671488 4361867 RPE_4174 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783079.1 4671015 R 316055 CDS YP_783080.1 115526169 4361868 complement(4671769..4672284) 1 NC_008435.1 PFAM: protein of unknown function DUF992; KEGG: rpc:RPC_4121 protein of unknown function DUF992; hypothetical protein 4672284 4361868 RPE_4175 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783080.1 4671769 R 316055 CDS YP_783081.1 115526170 4361869 complement(4672410..4673612) 1 NC_008435.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 4673612 4361869 RPE_4176 Rhodopseudomonas palustris BisA53 aspartate aminotransferase YP_783081.1 4672410 R 316055 CDS YP_783082.1 115526171 4361870 4674077..4674721 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rpc:RPC_4124 glutathione S-transferase-like; glutathione S-transferase 4674721 4361870 RPE_4177 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_783082.1 4674077 D 316055 CDS YP_783083.1 115526172 4361871 4675127..4676293 1 NC_008435.1 PFAM: glucose sorbosone dehydrogenase; KEGG: rpc:RPC_4125 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 4676293 4361871 RPE_4178 Rhodopseudomonas palustris BisA53 glucose sorbosone dehydrogenase YP_783083.1 4675127 D 316055 CDS YP_783084.1 115526173 4361872 complement(4676492..4676842) 1 NC_008435.1 PFAM: protein of unknown function DUF486; KEGG: rpc:RPC_4126 protein of unknown function DUF486; hypothetical protein 4676842 4361872 RPE_4179 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783084.1 4676492 R 316055 CDS YP_783085.1 115526174 4361873 4677141..4677974 1 NC_008435.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rpc:RPC_4127 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4677974 4361873 RPE_4180 Rhodopseudomonas palustris BisA53 phospholipid/glycerol acyltransferase YP_783085.1 4677141 D 316055 CDS YP_783086.1 115526175 4361874 4678065..4679003 1 NC_008435.1 PFAM: aldo/keto reductase; KEGG: rpc:RPC_4128 aldo/keto reductase; aldo/keto reductase 4679003 4361874 RPE_4181 Rhodopseudomonas palustris BisA53 aldo/keto reductase YP_783086.1 4678065 D 316055 CDS YP_783087.1 115526176 4361875 complement(4679571..4680089) 1 NC_008435.1 hypothetical protein 4680089 4361875 RPE_4182 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783087.1 4679571 R 316055 CDS YP_783088.1 115526177 4361876 4680951..4681391 1 NC_008435.1 KEGG: rpc:RPC_4131 hypothetical protein; hypothetical protein 4681391 4361876 RPE_4183 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783088.1 4680951 D 316055 CDS YP_783089.1 115526178 4361877 4681528..4681728 1 NC_008435.1 KEGG: rpc:RPC_4132 hypothetical protein; hypothetical protein 4681728 4361877 RPE_4184 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783089.1 4681528 D 316055 CDS YP_783090.1 115526179 4361878 4681748..4682470 1 NC_008435.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpc:RPC_4133 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase 4682470 4361878 RPE_4185 Rhodopseudomonas palustris BisA53 HAD family hydrolase YP_783090.1 4681748 D 316055 CDS YP_783091.1 115526180 4361879 complement(4682884..4683579) 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rpc:RPC_4134 glutathione S-transferase-like; glutathione S-transferase 4683579 4361879 RPE_4186 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_783091.1 4682884 R 316055 CDS YP_783092.1 115526181 4361880 complement(4683722..4684429) 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: rpb:RPB_4144 glutathione S-transferase-like; glutathione S-transferase 4684429 4361880 RPE_4187 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_783092.1 4683722 R 316055 CDS YP_783093.1 115526182 4361881 4684700..4685089 1 NC_008435.1 KEGG: bja:bll6206 hypothetical protein; hypothetical protein 4685089 4361881 RPE_4188 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783093.1 4684700 D 316055 CDS YP_783094.1 115526183 4361882 complement(4685297..4687285) 1 NC_008435.1 PFAM: beta-lactamase domain protein; KEGG: rpb:RPB_4145 beta-lactamase-like; beta-lactamase domain-containing protein 4687285 4361882 RPE_4189 Rhodopseudomonas palustris BisA53 beta-lactamase domain-containing protein YP_783094.1 4685297 R 316055 CDS YP_783095.1 115526184 4361883 4687523..4688575 1 NC_008435.1 KEGG: rpa:RPA4342 hypothetical protein; hypothetical protein 4688575 4361883 RPE_4190 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783095.1 4687523 D 316055 CDS YP_783096.1 115526185 4361884 4688622..4691693 1 NC_008435.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 4691693 4361884 RPE_4191 Rhodopseudomonas palustris BisA53 excinuclease ABC subunit B YP_783096.1 4688622 D 316055 CDS YP_783097.1 115526186 4361885 complement(4691817..4692221) 1 NC_008435.1 PFAM: protein of unknown function DUF1236; hypothetical protein 4692221 4361885 RPE_4192 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783097.1 4691817 R 316055 CDS YP_783098.1 115526187 4361886 complement(4692374..4692685) 1 NC_008435.1 KEGG: rpd:RPD_3990 hypothetical protein; hypothetical protein 4692685 4361886 RPE_4193 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783098.1 4692374 R 316055 CDS YP_783099.1 115526188 4361887 4692864..4693160 1 NC_008435.1 PFAM: protein of unknown function DUF891; KEGG: gme:Gmet_2533 protein of unknown function DUF891; hypothetical protein 4693160 4361887 RPE_4194 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783099.1 4692864 D 316055 CDS YP_783100.1 115526189 4361888 4693163..4693450 1 NC_008435.1 KEGG: rpd:RPD_3989 hypothetical protein; putative transcriptional regulator 4693450 4361888 RPE_4195 Rhodopseudomonas palustris BisA53 putative transcriptional regulator YP_783100.1 4693163 D 316055 CDS YP_783101.1 115526190 4361889 4693576..4693809 1 NC_008435.1 KEGG: rpa:RPA4344 hypothetical protein; hypothetical protein 4693809 4361889 RPE_4196 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783101.1 4693576 D 316055 CDS YP_783102.1 115526191 4361890 4693831..4694004 1 NC_008435.1 PFAM: YcfA family protein; KEGG: rpc:RPC_4143 YcfA-like; hypothetical protein 4694004 4361890 RPE_4197 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783102.1 4693831 D 316055 CDS YP_783103.1 115526192 4361891 complement(4694472..4695725) 1 NC_008435.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 4695725 4361891 RPE_4198 Rhodopseudomonas palustris BisA53 acetyl-CoA acetyltransferase YP_783103.1 4694472 R 316055 CDS YP_783104.1 115526193 4361892 4696122..4698206 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4147 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4698206 4361892 RPE_4199 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783104.1 4696122 D 316055 CDS YP_783105.1 115526194 4361893 4698309..4698683 1 NC_008435.1 KEGG: rpc:RPC_4148 hypothetical protein; hypothetical protein 4698683 4361893 RPE_4200 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783105.1 4698309 D 316055 CDS YP_783106.1 115526195 4361894 complement(4698861..4699109) 1 NC_008435.1 hypothetical protein 4699109 4361894 RPE_4201 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783106.1 4698861 R 316055 CDS YP_783107.1 115526196 4361895 complement(4699271..4700158) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rpc:RPC_4149 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4700158 4361895 RPE_4202 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_783107.1 4699271 R 316055 CDS YP_783108.1 115526197 4361896 complement(4700183..4701613) 1 NC_008435.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 4701613 4361896 RPE_4203 Rhodopseudomonas palustris BisA53 S-adenosyl-L-homocysteine hydrolase YP_783108.1 4700183 R 316055 CDS YP_783109.1 115526198 4361897 complement(4701879..4703075) 1 NC_008435.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 4703075 4361897 RPE_4204 Rhodopseudomonas palustris BisA53 S-adenosylmethionine synthetase YP_783109.1 4701879 R 316055 CDS YP_783110.1 115526199 4361898 complement(4703133..4704488) 1 NC_008435.1 KEGG: rpc:RPC_4155 hypothetical protein; hypothetical protein 4704488 4361898 RPE_4205 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783110.1 4703133 R 316055 CDS YP_783111.1 115526200 4361899 4704721..4706031 1 NC_008435.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: rpc:RPC_4156 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 4706031 4361899 RPE_4206 Rhodopseudomonas palustris BisA53 UDP-glucose 6-dehydrogenase YP_783111.1 4704721 D 316055 CDS YP_783112.1 115526201 4361900 4706147..4707856 1 NC_008435.1 PFAM: TPR repeat-containing protein; peptidase C14, caspase catalytic subunit p20; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr5947 hypothetical protein; peptidase C14, caspase catalytic subunit p20 4707856 4361900 RPE_4207 Rhodopseudomonas palustris BisA53 peptidase C14, caspase catalytic subunit p20 YP_783112.1 4706147 D 316055 CDS YP_783113.1 115526202 4361901 complement(4707892..4708299) 1 NC_008435.1 KEGG: rpa:RPA4278 hypothetical protein; hypothetical protein 4708299 4361901 RPE_4208 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783113.1 4707892 R 316055 CDS YP_783114.1 115526203 4361902 complement(4708328..4709446) 1 NC_008435.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 4709446 4361902 RPE_4209 Rhodopseudomonas palustris BisA53 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_783114.1 4708328 R 316055 CDS YP_783115.1 115526204 4361903 complement(4709498..4710223) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA4025 putative branched-chain amino acid ABC transport system ATP-binding protein; ABC transporter-like protein 4710223 4361903 RPE_4210 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783115.1 4709498 R 316055 CDS YP_783116.1 115526205 4361904 complement(4710216..4710968) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_1589 ABC transporter related; ABC transporter-like protein 4710968 4361904 RPE_4211 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783116.1 4710216 R 316055 CDS YP_783117.1 115526206 4361905 complement(4710965..4711996) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: bja:bll5951 ABC transporter permease protein; inner-membrane translocator 4711996 4361905 RPE_4212 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_783117.1 4710965 R 316055 CDS YP_783118.1 115526207 4361906 complement(4712001..4712867) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpa:RPA4028 possible ABC transport system permease protein; inner-membrane translocator 4712867 4361906 RPE_4213 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_783118.1 4712001 R 316055 CDS YP_783119.1 115526208 4361907 4713058..4714098 1 NC_008435.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rpc:RPC_4622 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 4714098 4361907 RPE_4214 Rhodopseudomonas palustris BisA53 transposase IS116/IS110/IS902 family protein YP_783119.1 4713058 D 316055 CDS YP_783120.1 115526209 4361908 complement(4714424..4715602) 1 NC_008435.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpd:RPD_1586 twin-arginine translocation pathway signal; extracellular ligand-binding receptor 4715602 4361908 RPE_4215 Rhodopseudomonas palustris BisA53 extracellular ligand-binding receptor YP_783120.1 4714424 R 316055 CDS YP_783121.1 115526210 4361909 4715882..4716223 1 NC_008435.1 KEGG: bja:blr5954 hypothetical protein; hypothetical protein 4716223 4361909 RPE_4216 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783121.1 4715882 D 316055 CDS YP_783122.1 115526211 4361910 4716363..4717379 1 NC_008435.1 PFAM: glycosyl transferase, family 4; KEGG: rpc:RPC_4162 glycosyl transferase, family 4; glycosyl transferase family protein 4717379 4361910 RPE_4217 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_783122.1 4716363 D 316055 CDS YP_783123.1 115526212 4361911 complement(4717380..4719287) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: rpc:RPC_4163 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 4719287 4361911 RPE_4218 Rhodopseudomonas palustris BisA53 polysaccharide biosynthesis protein CapD YP_783123.1 4717380 R 316055 CDS YP_783124.1 115526213 4361912 complement(4719575..4720438) 1 NC_008435.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 4720438 purU 4361912 purU Rhodopseudomonas palustris BisA53 formyltetrahydrofolate deformylase YP_783124.1 4719575 R 316055 CDS YP_783125.1 115526214 4361913 4720571..4721401 1 NC_008435.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: rpc:RPC_4165 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 4721401 4361913 RPE_4220 Rhodopseudomonas palustris BisA53 uroporphyrinogen III synthase HEM4 YP_783125.1 4720571 D 316055 CDS YP_783126.1 115526215 4361914 4721586..4722818 1 NC_008435.1 KEGG: rpc:RPC_4167 ABC transporter, periplasmic branched chain amino acid binding protein; ABC transporter periplasmic branched chain amino acid binding protein 4722818 4361914 RPE_4221 Rhodopseudomonas palustris BisA53 ABC transporter periplasmic branched chain amino acid binding protein YP_783126.1 4721586 D 316055 CDS YP_783127.1 115526216 4361915 4723032..4723979 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpc:RPC_4168 inner-membrane translocator; inner-membrane translocator 4723979 4361915 RPE_4222 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_783127.1 4723032 D 316055 CDS YP_783128.1 115526217 4361916 4723976..4725277 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_1578 inner-membrane translocator; inner-membrane translocator 4725277 4361916 RPE_4223 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_783128.1 4723976 D 316055 CDS YP_783129.1 115526218 4361917 4725274..4726023 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4170 ABC transporter related; ABC transporter-like protein 4726023 4361917 RPE_4224 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783129.1 4725274 D 316055 CDS YP_783130.1 115526219 4361918 4726023..4726718 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA4038 possible ABC transport system ATP-binding protein; ABC transporter-like protein 4726718 4361918 RPE_4225 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783130.1 4726023 D 316055 CDS YP_783131.1 115526220 4361919 4726823..4727722 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1561 ABC transporter related; ABC transporter-like protein 4727722 4361919 RPE_4226 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783131.1 4726823 D 316055 CDS YP_783132.1 115526221 4361920 4727719..4729650 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_1560 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4729650 4361920 RPE_4227 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_783132.1 4727719 D 316055 CDS YP_783133.1 115526222 4361921 complement(4729854..4730219) 1 NC_008435.1 PFAM: protein of unknown function DUF559; KEGG: rpb:RPB_1559 protein of unknown function DUF559; hypothetical protein 4730219 4361921 RPE_4228 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783133.1 4729854 R 316055 CDS YP_783134.1 115526223 4361922 4730330..4731223 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_1568 inner-membrane translocator; inner-membrane translocator 4731223 4361922 RPE_4229 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_783134.1 4730330 D 316055 CDS YP_783135.1 115526224 4361923 4731230..4732303 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpc:RPC_4178 inner-membrane translocator; inner-membrane translocator 4732303 4361923 RPE_4230 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_783135.1 4731230 D 316055 CDS YP_783136.1 115526225 4361924 4732363..4733643 1 NC_008435.1 KEGG: rpa:RPA4045 possible branched-chain amino acid ABC transport system substrate-binding protein; putative branched-chain amino acid ABC transport system substrate-binding protein 4733643 4361924 RPE_4231 Rhodopseudomonas palustris BisA53 putative branched-chain amino acid ABC transport system substrate-binding protein YP_783136.1 4732363 D 316055 CDS YP_783137.1 115526226 4361925 4733799..4734635 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1555 ABC transporter related; ABC transporter-like protein 4734635 4361925 RPE_4232 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783137.1 4733799 D 316055 CDS YP_783138.1 115526227 4361926 4734802..4735971 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: bpa:BPP0798 putative glycosyltransferase; group 1 glycosyl transferase 4735971 4361926 RPE_4233 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_783138.1 4734802 D 316055 CDS YP_783139.1 115526228 4361927 complement(4735972..4737426) 1 NC_008435.1 PFAM: aldehyde dehydrogenase; KEGG: gvi:glr3848 aldehyde dehydrogenase; aldehyde dehydrogenase 4737426 4361927 RPE_4234 Rhodopseudomonas palustris BisA53 aldehyde dehydrogenase YP_783139.1 4735972 R 316055 CDS YP_783140.1 115526229 4361928 complement(4737444..4738259) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr5976 putative oxidoreductase; short-chain dehydrogenase/reductase SDR 4738259 4361928 RPE_4235 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_783140.1 4737444 R 316055 CDS YP_783141.1 115526230 4361929 complement(4738262..4739335) 1 NC_008435.1 PFAM: N-acetylneuraminic acid synthase, N-terminal domain; KEGG: dre:322780 zgc:77126; N-acetylneuraminate synthase 4739335 4361929 RPE_4236 Rhodopseudomonas palustris BisA53 N-acetylneuraminate synthase YP_783141.1 4738262 R 316055 CDS YP_783142.1 115526231 4361930 complement(4739411..4741096) 1 NC_008435.1 PFAM: Capsule polysaccharide biosynthesis; KEGG: syn:slr2115 hypothetical protein; capsule polysaccharide biosynthesis 4741096 4361930 RPE_4237 Rhodopseudomonas palustris BisA53 capsule polysaccharide biosynthesis YP_783142.1 4739411 R 316055 CDS YP_783143.1 115526232 4361931 complement(4741093..4743030) 1 NC_008435.1 PFAM: Transketolase domain protein; Transketolase, central region; KEGG: sma:SAV1891 putative transketolase; transketolase, central region 4743030 4361931 RPE_4238 Rhodopseudomonas palustris BisA53 transketolase, central region YP_783143.1 4741093 R 316055 CDS YP_783144.1 115526233 4361932 complement(4743066..4743845) 1 NC_008435.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: nmu:Nmul_A0410 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 4743845 4361932 RPE_4239 Rhodopseudomonas palustris BisA53 acylneuraminate cytidylyltransferase YP_783144.1 4743066 R 316055 CDS YP_783145.1 115526234 4361933 4744037..4744561 1 NC_008435.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; KEGG: sco:SCO4880 transferase; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4744561 4361933 RPE_4240 Rhodopseudomonas palustris BisA53 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_783145.1 4744037 D 316055 CDS YP_783146.1 115526235 4361934 4744602..4745735 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: rpb:RPB_1547 glycosyl transferase, group 1; group 1 glycosyl transferase 4745735 4361934 RPE_4241 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_783146.1 4744602 D 316055 CDS YP_783147.1 115526236 4361935 complement(4745748..4746551) 1 NC_008435.1 TIGRFAM: methyltransferase FkbM family; KEGG: sma:SAV5730 hypothetical protein; FkbM family methyltransferase 4746551 4361935 RPE_4242 Rhodopseudomonas palustris BisA53 FkbM family methyltransferase YP_783147.1 4745748 R 316055 CDS YP_783148.1 115526237 4361936 complement(4746563..4747135) 1 NC_008435.1 KEGG: ret:RHE_CH01595 hypothetical protein; hypothetical protein 4747135 4361936 RPE_4243 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783148.1 4746563 R 316055 CDS YP_783149.1 115526238 4361937 4747416..4747844 1 NC_008435.1 hypothetical protein 4747844 4361937 RPE_4244 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783149.1 4747416 D 316055 CDS YP_783150.1 115526239 4361938 4747868..4748797 1 NC_008435.1 hypothetical protein 4748797 4361938 RPE_4245 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783150.1 4747868 D 316055 CDS YP_783151.1 115526240 4361939 4749023..4749805 1 NC_008435.1 PFAM: Cephalosporin hydroxylase; KEGG: pfo:Pfl_1516 cephalosporin hydroxylase; cephalosporin hydroxylase 4749805 4361939 RPE_4246 Rhodopseudomonas palustris BisA53 cephalosporin hydroxylase YP_783151.1 4749023 D 316055 CDS YP_783152.1 115526241 4361940 complement(4749957..4751996) 1 NC_008435.1 PFAM: glycosyl transferase, family 2; KEGG: sco:SCO0398 glycosyl transferase; glycosyl transferase family protein 4751996 4361940 RPE_4247 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_783152.1 4749957 R 316055 CDS YP_783153.1 115526242 4361941 complement(4752039..4753256) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_0851 ATPase; ABC transporter-like protein 4753256 4361941 RPE_4248 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783153.1 4752039 R 316055 CDS YP_783154.1 115526243 4361942 complement(4753273..4754103) 1 NC_008435.1 PFAM: ABC-2 type transporter; KEGG: dde:Dde_0841 polysaccharide ABC transporter, permease protein; ABC-2 type transporter 4754103 4361942 RPE_4249 Rhodopseudomonas palustris BisA53 ABC-2 type transporter YP_783154.1 4753273 R 316055 CDS YP_783155.1 115526244 4361943 complement(4754303..4755505) 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: ade:Adeh_3057 glycosyl transferase, group 1; group 1 glycosyl transferase 4755505 4361943 RPE_4250 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_783155.1 4754303 R 316055 CDS YP_783156.1 115526245 4361944 complement(4755843..4757576) 1 NC_008435.1 KEGG: syn:slr2115 hypothetical protein; hypothetical protein 4757576 4361944 RPE_4251 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783156.1 4755843 R 316055 CDS YP_783157.1 115526246 4361945 complement(4757581..4758747) 1 NC_008435.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sdn:Sden_2654 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 4758747 4361945 RPE_4252 Rhodopseudomonas palustris BisA53 DegT/DnrJ/EryC1/StrS aminotransferase YP_783157.1 4757581 R 316055 CDS YP_783158.1 115526247 4361946 4759061..4759825 1 NC_008435.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: tbd:Tbd_1881 alpha-D-glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 4759825 4361946 RPE_4253 Rhodopseudomonas palustris BisA53 glucose-1-phosphate cytidylyltransferase YP_783158.1 4759061 D 316055 CDS YP_783159.1 115526248 4361947 4759825..4760886 1 NC_008435.1 TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: yps:YPTB1000 CDP-glucose 4,6-dehydratase; CDP-glucose 4,6-dehydratase 4760886 4361947 RPE_4254 Rhodopseudomonas palustris BisA53 CDP-glucose 4,6-dehydratase YP_783159.1 4759825 D 316055 CDS YP_783160.1 115526249 4361948 4760883..4762109 1 NC_008435.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; KEGG: bms:BRA0438 methyltransferase, putative; C-methyltransferase 4762109 4361948 RPE_4255 Rhodopseudomonas palustris BisA53 C-methyltransferase YP_783160.1 4760883 D 316055 CDS YP_783161.1 115526250 4361949 4762109..4762642 1 NC_008435.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; KEGG: fra:Francci3_3940 dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 4762642 4361949 RPE_4256 Rhodopseudomonas palustris BisA53 dTDP-4-dehydrorhamnose 3,5-epimerase YP_783161.1 4762109 D 316055 CDS YP_783162.1 115526251 4361950 4762639..4763316 1 NC_008435.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: mag:amb0053 acetyltransferase; hexapaptide repeat-containing transferase 4763316 4361950 RPE_4257 Rhodopseudomonas palustris BisA53 hexapaptide repeat-containing transferase YP_783162.1 4762639 D 316055 CDS YP_783163.1 115526252 4361951 4763336..4764523 1 NC_008435.1 KEGG: rpa:RPA2578 possible alginate O-acetyltransferase AlgJ; hypothetical protein 4764523 4361951 RPE_4258 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783163.1 4763336 D 316055 CDS YP_783164.1 115526253 4361952 4764549..4765976 1 NC_008435.1 PFAM: membrane bound O-acyl transferase, MBOAT family protein; KEGG: bca:BCE0975 alginate O-acetyltransferase, putative; membrane bound O-acyl transferase, MBOAT family protein 4765976 4361952 RPE_4259 Rhodopseudomonas palustris BisA53 membrane bound O-acyl transferase, MBOAT family protein YP_783164.1 4764549 D 316055 CDS YP_783165.1 115526254 4361953 complement(4766047..4767021) 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: gox:GOX1611 GDP-6-deoxy-D-lyxo-4-hexulose reductase; NAD-dependent epimerase/dehydratase 4767021 4361953 RPE_4260 Rhodopseudomonas palustris BisA53 NAD-dependent epimerase/dehydratase YP_783165.1 4766047 R 316055 CDS YP_783166.1 115526255 4361954 complement(4767066..4768037) 1 NC_008435.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: nha:Nham_2780 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 4768037 4361954 RPE_4261 Rhodopseudomonas palustris BisA53 GDP-mannose 4,6-dehydratase YP_783166.1 4767066 R 316055 CDS YP_783167.1 115526256 4361955 complement(4768085..4768618) 1 NC_008435.1 hypothetical protein 4768618 4361955 RPE_4262 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783167.1 4768085 R 316055 CDS YP_783168.1 115526257 4361956 complement(4768955..4770190) 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_4224 major facilitator superfamily MFS_1; major facilitator transporter 4770190 4361956 RPE_4263 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_783168.1 4768955 R 316055 CDS YP_783169.1 115526258 4361957 4770372..4772606 1 NC_008435.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 4772606 flhA 4361957 flhA Rhodopseudomonas palustris BisA53 flagellar biosynthesis protein FlhA YP_783169.1 4770372 D 316055 CDS YP_783170.1 115526259 4361958 4772913..4773113 1 NC_008435.1 KEGG: rpc:RPC_4226 hypothetical protein; hypothetical protein 4773113 4361958 RPE_4265 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783170.1 4772913 D 316055 CDS YP_783171.1 115526260 4361959 complement(4773293..4774231) 1 NC_008435.1 KEGG: rpc:RPC_4227 hypothetical protein; hypothetical protein 4774231 4361959 RPE_4266 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783171.1 4773293 R 316055 CDS YP_783172.1 115526261 4361960 complement(4774231..4774779) 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpc:RPC_4228 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 4774779 4361960 RPE_4267 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_783172.1 4774231 R 316055 CDS YP_783173.1 115526262 4361961 complement(4774960..4775379) 1 NC_008435.1 TIGRFAM: flagellar export protein FliJ; KEGG: rpc:RPC_4231 flagellar export FliJ; flagellar export FliJ 4775379 4361961 RPE_4268 Rhodopseudomonas palustris BisA53 flagellar export FliJ YP_783173.1 4774960 R 316055 CDS YP_783174.1 115526263 4361962 complement(4775490..4776815) 1 NC_008435.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 4776815 fliI 4361962 fliI Rhodopseudomonas palustris BisA53 flagellum-specific ATP synthase YP_783174.1 4775490 R 316055 CDS YP_783175.1 115526264 4361963 4777190..4777891 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpd:RPD_3672 response regulator receiver; two component transcriptional regulator 4777891 4361963 RPE_4270 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_783175.1 4777190 D 316055 CDS YP_783176.1 115526265 4361964 complement(4778018..4779037) 1 NC_008435.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: dar:Daro_1236 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 4779037 4361964 RPE_4271 Rhodopseudomonas palustris BisA53 UDP-glucose 4-epimerase YP_783176.1 4778018 R 316055 CDS YP_783177.1 115526266 4361965 complement(4779119..4780531) 1 NC_008435.1 KEGG: rpc:RPC_4235 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4780531 4361965 RPE_4272 Rhodopseudomonas palustris BisA53 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_783177.1 4779119 R 316055 CDS YP_783178.1 115526267 4361966 complement(4780664..4781110) 1 NC_008435.1 PFAM: GtrA family protein; KEGG: rpc:RPC_4236 GtrA-like protein; GtrA family protein 4781110 4361966 RPE_4273 Rhodopseudomonas palustris BisA53 GtrA family protein YP_783178.1 4780664 R 316055 CDS YP_783179.1 115526268 4361967 complement(4781238..4781813) 1 NC_008435.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bxe:Bxe_B2779 amino acid efflux pump, RhtB family, LysE superfamily; lysine exporter protein LysE/YggA 4781813 4361967 RPE_4274 Rhodopseudomonas palustris BisA53 lysine exporter protein LysE/YggA YP_783179.1 4781238 R 316055 CDS YP_783180.1 115526269 4361968 4782038..4782775 1 NC_008435.1 SMART: transglutaminase domain protein; KEGG: rpd:RPD_1465 transglutaminase-like; transglutaminase domain-containing protein 4782775 4361968 RPE_4275 Rhodopseudomonas palustris BisA53 transglutaminase domain-containing protein YP_783180.1 4782038 D 316055 CDS YP_783181.1 115526270 4361969 complement(4782842..4784527) 1 NC_008435.1 KEGG: bja:blr2933 probable aerotaxis receptor; TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 4784527 4361969 RPE_4276 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_783181.1 4782842 R 316055 CDS YP_783182.1 115526271 4361971 complement(4785679..4787178) 1 NC_008435.1 PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rpc:RPC_4239 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 4787178 4361971 RPE_4278 Rhodopseudomonas palustris BisA53 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_783182.1 4785679 R 316055 CDS YP_783183.1 115526272 4361972 4787341..4788492 1 NC_008435.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: rpc:RPC_4240 N-acylglucosamine 2-epimerase; mannose-6-phosphate isomerase 4788492 4361972 RPE_4279 Rhodopseudomonas palustris BisA53 mannose-6-phosphate isomerase YP_783183.1 4787341 D 316055 CDS YP_783184.1 115526273 4361973 complement(4788517..4789395) 1 NC_008435.1 PFAM: MCP methyltransferase, CheR-type; KEGG: rpc:RPC_4243 MCP methyltransferase, CheR-type; chemotaxis protein CheR 4789395 4361973 RPE_4280 Rhodopseudomonas palustris BisA53 chemotaxis protein CheR YP_783184.1 4788517 R 316055 CDS YP_783185.1 115526274 4361974 complement(4789392..4790561) 1 NC_008435.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 4790561 4361974 RPE_4281 Rhodopseudomonas palustris BisA53 chemotaxis-specific methylesterase YP_783185.1 4789392 R 316055 CDS YP_783186.1 115526275 4361975 complement(4790636..4791001) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_4245 response regulator receiver domain protein (CheY-like); response regulator receiver protein 4791001 4361975 RPE_4282 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_783186.1 4790636 R 316055 CDS YP_783187.1 115526276 4361976 complement(4791075..4791566) 1 NC_008435.1 PFAM: CheW domain protein; KEGG: rpc:RPC_4246 CheW protein; CheW protein 4791566 4361976 RPE_4283 Rhodopseudomonas palustris BisA53 CheW protein YP_783187.1 4791075 R 316055 CDS YP_783188.1 115526277 4361977 complement(4791572..4794415) 1 NC_008435.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rpc:RPC_4247 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase 4794415 4361977 RPE_4284 Rhodopseudomonas palustris BisA53 CheA signal transduction histidine kinase YP_783188.1 4791572 R 316055 CDS YP_783189.1 115526278 4361978 complement(4794563..4795237) 1 NC_008435.1 KEGG: rpc:RPC_4248 hypothetical protein; hypothetical protein 4795237 4361978 RPE_4285 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783189.1 4794563 R 316055 CDS YP_783190.1 115526279 4361979 4795428..4796267 1 NC_008435.1 PFAM: inositol monophosphatase; KEGG: rpc:RPC_4249 3'(2'),5'-bisphosphate nucleotidase; inositol monophosphatase 4796267 4361979 RPE_4286 Rhodopseudomonas palustris BisA53 inositol monophosphatase YP_783190.1 4795428 D 316055 CDS YP_783191.1 115526280 4361980 complement(4796268..4796828) 1 NC_008435.1 KEGG: rpc:RPC_4250 hypothetical protein; hypothetical protein 4796828 4361980 RPE_4287 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783191.1 4796268 R 316055 CDS YP_783192.1 115526281 4361981 4796880..4797479 1 NC_008435.1 PFAM: Uncharacterised conserved protein UCP033924; KEGG: rpc:RPC_4251 uncharacterised conserved protein UCP033924; hypothetical protein 4797479 4361981 RPE_4288 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783192.1 4796880 D 316055 CDS YP_783193.1 115526282 4361982 4797703..4798908 1 NC_008435.1 KEGG: rpc:RPC_4252 hypothetical protein; hypothetical protein 4798908 4361982 RPE_4289 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783193.1 4797703 D 316055 CDS YP_783194.1 115526283 4361984 complement(4799361..4799849) 1 NC_008435.1 PFAM: ferric-uptake regulator; KEGG: rpc:RPC_0350 ferric uptake regulator, FUR family; ferric uptake regulator family protein 4799849 4361984 RPE_4290 Rhodopseudomonas palustris BisA53 ferric uptake regulator family protein YP_783194.1 4799361 R 316055 CDS YP_783195.1 115526284 4361985 complement(4799993..4800691) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1962 ABC transporter related; ABC transporter-like protein 4800691 4361985 RPE_4291 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783195.1 4799993 R 316055 CDS YP_783196.1 115526285 4361986 complement(4800675..4801472) 1 NC_008435.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rpc:RPC_1961 cobalt ABC transporter CbiQ, permease subunit; cobalt ABC transporter inner membrane subunit CbiQ 4801472 4361986 RPE_4292 Rhodopseudomonas palustris BisA53 cobalt ABC transporter inner membrane subunit CbiQ YP_783196.1 4800675 R 316055 CDS YP_783197.1 115526286 4361987 complement(4801472..4802095) 1 NC_008435.1 KEGG: rpc:RPC_1960 hypothetical protein; hypothetical protein 4802095 4361987 RPE_4293 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783197.1 4801472 R 316055 CDS YP_783198.1 115526287 4361988 complement(4802100..4802723) 1 NC_008435.1 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 4802723 4361988 RPE_4294 Rhodopseudomonas palustris BisA53 cobalt transport protein CbiM YP_783198.1 4802100 R 316055 CDS YP_783199.1 115526288 4361989 complement(4802741..4803535) 1 NC_008435.1 KEGG: rpc:RPC_1958 hypothetical protein; hypothetical protein 4803535 4361989 RPE_4295 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783199.1 4802741 R 316055 CDS YP_783200.1 115526289 4361990 4804580..4805044 1 NC_008435.1 PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_3521 thioesterase superfamily; thioesterase superfamily protein 4805044 4361990 RPE_4296 Rhodopseudomonas palustris BisA53 thioesterase superfamily protein YP_783200.1 4804580 D 316055 CDS YP_783201.1 115526290 4361991 4805603..4805893 1 NC_008435.1 hypothetical protein 4805893 4361991 RPE_4297 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783201.1 4805603 D 316055 CDS YP_783202.1 115526291 4361992 complement(4805973..4806779) 1 NC_008435.1 KEGG: rpa:RPA4081 possible pilus assembly protein cpaB; Flp pilus assembly CpaB 4806779 4361992 RPE_4298 Rhodopseudomonas palustris BisA53 Flp pilus assembly CpaB YP_783202.1 4805973 R 316055 CDS YP_783203.1 115526292 4361993 4807111..4807422 1 NC_008435.1 KEGG: rpd:RPD_3686 hypothetical protein; hypothetical protein 4807422 4361993 RPE_4299 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783203.1 4807111 D 316055 CDS YP_783204.1 115526293 4361994 complement(4807698..4809236) 1 NC_008435.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 4809236 4361994 RPE_4300 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783204.1 4807698 R 316055 CDS YP_783205.1 115526294 4361995 4809399..4809971 1 NC_008435.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpc:RPC_4261 ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG family protein 4809971 4361995 RPE_4301 Rhodopseudomonas palustris BisA53 ErfK/YbiS/YcfS/YnhG family protein YP_783205.1 4809399 D 316055 CDS YP_783206.1 115526295 4361996 4809995..4810801 1 NC_008435.1 KEGG: rpc:RPC_4262 hypothetical protein; hypothetical protein 4810801 4361996 RPE_4302 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783206.1 4809995 D 316055 CDS YP_783207.1 115526296 4361997 complement(4810805..4811923) 1 NC_008435.1 PFAM: peptidase M48, Ste24p; KEGG: rpd:RPD_3691 peptidase M48, Ste24p; peptidase M48, Ste24p 4811923 4361997 RPE_4303 Rhodopseudomonas palustris BisA53 peptidase M48, Ste24p YP_783207.1 4810805 R 316055 CDS YP_783208.1 115526297 4361998 complement(4811927..4813084) 1 NC_008435.1 KEGG: rpd:RPD_3692 hypothetical protein; hypothetical protein 4813084 4361998 RPE_4304 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783208.1 4811927 R 316055 CDS YP_783209.1 115526298 4361999 complement(4813332..4815014) 1 NC_008435.1 catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase 4815014 4361999 RPE_4305 Rhodopseudomonas palustris BisA53 benzoylformate decarboxylase YP_783209.1 4813332 R 316055 CDS YP_783210.1 115526299 4362000 complement(4815247..4816104) 1 NC_008435.1 KEGG: rpa:RPA1610 hypothetical protein; hypothetical protein 4816104 4362000 RPE_4306 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783210.1 4815247 R 316055 CDS YP_783211.1 115526300 4362001 complement(4816119..4817231) 1 NC_008435.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rpc:RPC_4266 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4817231 4362001 RPE_4307 Rhodopseudomonas palustris BisA53 L-carnitine dehydratase/bile acid-inducible protein F YP_783211.1 4816119 R 316055 CDS YP_783212.1 115526301 4362002 complement(4817417..4818589) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpa:RPA1612 putative acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4818589 4362002 RPE_4308 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_783212.1 4817417 R 316055 CDS YP_783213.1 115526302 4362003 complement(4818635..4819900) 1 NC_008435.1 PFAM: cytochrome P450; KEGG: rpa:RPA1613 putative cytochrome P-450; cytochrome P450 4819900 4362003 RPE_4309 Rhodopseudomonas palustris BisA53 cytochrome P450 YP_783213.1 4818635 R 316055 CDS YP_783214.1 115526303 4362004 4820169..4821341 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_3693 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4821341 4362004 RPE_4310 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_783214.1 4820169 D 316055 CDS YP_783215.1 115526304 4362005 complement(4821434..4822240) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll7251 putative dehydrogenase; short-chain dehydrogenase/reductase SDR 4822240 4362005 RPE_4311 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_783215.1 4821434 R 316055 CDS YP_783216.1 115526305 4362006 complement(4822291..4822986) 1 NC_008435.1 PFAM: Hly-III family protein; KEGG: rpc:RPC_4269 Hly-III related proteins; Hly-III-like protein 4822986 4362006 RPE_4312 Rhodopseudomonas palustris BisA53 Hly-III-like protein YP_783216.1 4822291 R 316055 CDS YP_783217.1 115526306 4362007 4823218..4824684 1 NC_008435.1 PFAM: protein of unknown function DUF463, YcjX family protein; KEGG: rpc:RPC_4270 protein of unknown function DUF463, YcjX-like protein; hypothetical protein 4824684 4362007 RPE_4313 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783217.1 4823218 D 316055 CDS YP_783218.1 115526307 4362008 4824681..4825814 1 NC_008435.1 PFAM: conserved hypothetical protein 1620; KEGG: rpc:RPC_4271 conserved hypothetical protein 1620; hypothetical protein 4825814 4362008 RPE_4314 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783218.1 4824681 D 316055 CDS YP_783219.1 115526308 4362009 4826028..4826228 1 NC_008435.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: nwi:Nwi_3054 cold-shock protein, DNA-binding; cold-shock DNA-binding domain-containing protein 4826228 4362009 RPE_4315 Rhodopseudomonas palustris BisA53 cold-shock DNA-binding domain-containing protein YP_783219.1 4826028 D 316055 CDS YP_783220.1 115526309 4362010 complement(4826380..4827018) 1 NC_008435.1 KEGG: rpc:RPC_4273 hypothetical protein; hypothetical protein 4827018 4362010 RPE_4316 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783220.1 4826380 R 316055 CDS YP_783221.1 115526310 4362011 4827268..4830267 1 NC_008435.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 4830267 4362011 RPE_4317 Rhodopseudomonas palustris BisA53 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_783221.1 4827268 D 316055 CDS YP_783222.1 115526311 4362012 4831530..4832738 1 NC_008435.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rpb:RPB_3947 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4832738 4362012 RPE_4318 Rhodopseudomonas palustris BisA53 L-carnitine dehydratase/bile acid-inducible protein F YP_783222.1 4831530 D 316055 CDS YP_783223.1 115526312 4362013 complement(4832819..4833727) 1 NC_008435.1 KEGG: rpc:RPC_1336 hypothetical protein; hypothetical protein 4833727 4362013 RPE_4319 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783223.1 4832819 R 316055 CDS YP_783224.1 115526313 4362014 complement(4833909..4834406) 1 NC_008435.1 PFAM: protein of unknown function DUF477; KEGG: rpc:RPC_1335 protein of unknown function DUF477; hypothetical protein 4834406 4362014 RPE_4320 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783224.1 4833909 R 316055 CDS YP_783225.1 115526314 4362015 complement(4834410..4835294) 1 NC_008435.1 PFAM: protein of unknown function DUF477; KEGG: rpc:RPC_1334 protein of unknown function DUF477; hypothetical protein 4835294 4362015 RPE_4321 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783225.1 4834410 R 316055 CDS YP_783226.1 115526315 4362016 complement(4835319..4835927) 1 NC_008435.1 PFAM: LemA family protein; KEGG: rpd:RPD_3714 LemA; hypothetical protein 4835927 4362016 RPE_4322 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783226.1 4835319 R 316055 CDS YP_783227.1 115526316 4362017 complement(4836127..4838448) 1 NC_008435.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpd:RPD_3715 carbon-monoxide dehydrogenase; carbon-monoxide dehydrogenase 4838448 4362017 RPE_4323 Rhodopseudomonas palustris BisA53 carbon-monoxide dehydrogenase YP_783227.1 4836127 R 316055 CDS YP_783228.1 115526317 4362018 complement(4838626..4840161) 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_4229 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4840161 4362018 RPE_4324 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_783228.1 4838626 R 316055 CDS YP_783229.1 115526318 4362019 complement(4840328..4840741) 1 NC_008435.1 KEGG: rpc:RPC_1349 hypothetical protein; hypothetical protein 4840741 4362019 RPE_4325 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783229.1 4840328 R 316055 CDS YP_783230.1 115526319 4362020 4840948..4841790 1 NC_008435.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rpb:RPB_4234 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 4841790 4362020 RPE_4326 Rhodopseudomonas palustris BisA53 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_783230.1 4840948 D 316055 CDS YP_783231.1 115526320 4362021 4842089..4842703 1 NC_008435.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: rpd:RPD_4086 glutathione S-transferase-like; glutathione S-transferase 4842703 4362021 RPE_4327 Rhodopseudomonas palustris BisA53 glutathione S-transferase YP_783231.1 4842089 D 316055 CDS YP_783232.1 115526321 4362022 complement(4842720..4843262) 1 NC_008435.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: rpc:RPC_1345 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 4843262 4362022 RPE_4328 Rhodopseudomonas palustris BisA53 methylated-DNA--protein-cysteine methyltransferase YP_783232.1 4842720 R 316055 CDS YP_783233.1 115526322 4362023 complement(4843295..4844392) 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: rpc:RPC_1342 glycosyl transferase, group 1; group 1 glycosyl transferase 4844392 4362023 RPE_4329 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_783233.1 4843295 R 316055 CDS YP_783234.1 115526323 4362024 complement(4844477..4845628) 1 NC_008435.1 PFAM: glycosyl transferase, group 1; KEGG: gox:GOX1614 putative hexosyltransferase; group 1 glycosyl transferase 4845628 4362024 RPE_4330 Rhodopseudomonas palustris BisA53 group 1 glycosyl transferase YP_783234.1 4844477 R 316055 CDS YP_783235.1 115526324 4362025 4845759..4847195 1 NC_008435.1 PFAM: O-antigen polymerase; KEGG: rpc:RPC_1341 O-antigen polymerase; O-antigen polymerase 4847195 4362025 RPE_4331 Rhodopseudomonas palustris BisA53 O-antigen polymerase YP_783235.1 4845759 D 316055 CDS YP_783236.1 115526325 4362026 complement(4847156..4847752) 1 NC_008435.1 KEGG: rpc:RPC_1340 hypothetical protein; hypothetical protein 4847752 4362026 RPE_4332 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783236.1 4847156 R 316055 CDS YP_783237.1 115526326 4362027 complement(4847988..4849535) 1 NC_008435.1 PFAM: Animal heme peroxidase; KEGG: gvi:glr3599 hypothetical protein; heme peroxidase 4849535 4362027 RPE_4333 Rhodopseudomonas palustris BisA53 heme peroxidase YP_783237.1 4847988 R 316055 CDS YP_783238.1 115526327 4362028 complement(4849801..4850073) 1 NC_008435.1 hypothetical protein 4850073 4362028 RPE_4334 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783238.1 4849801 R 316055 CDS YP_783239.1 115526328 4362034 4856717..4858789 1 NC_008435.1 PFAM: peptidase M23B; KEGG: rpc:RPC_4275 peptidase M23B; peptidase M23B 4858789 4362034 RPE_4335 Rhodopseudomonas palustris BisA53 peptidase M23B YP_783239.1 4856717 D 316055 CDS YP_783240.1 115526329 4362035 4859001..4860629 1 NC_008435.1 KEGG: rpa:RPA4432 NHL repeat; NHL repeat-containing protein 4860629 4362035 RPE_4336 Rhodopseudomonas palustris BisA53 NHL repeat-containing protein YP_783240.1 4859001 D 316055 CDS YP_783241.1 115526330 4362036 complement(4860685..4863324) 1 NC_008435.1 PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rpd:RPD_4095 ATPase AAA-2; ATPase 4863324 4362036 RPE_4337 Rhodopseudomonas palustris BisA53 ATPase YP_783241.1 4860685 R 316055 CDS YP_783242.1 115526331 4362037 complement(4863559..4864320) 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4278 hypothetical protein; hypothetical protein 4864320 4362037 RPE_4338 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783242.1 4863559 R 316055 CDS YP_783243.1 115526332 4362038 complement(4864610..4865302) 1 NC_008435.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_4280 methionine biosynthesis MetW; methionine biosynthesis MetW 4865302 4362038 RPE_4339 Rhodopseudomonas palustris BisA53 methionine biosynthesis MetW YP_783243.1 4864610 R 316055 CDS YP_783244.1 115526333 4362039 complement(4865304..4866506) 1 NC_008435.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 4866506 metX 4362039 metX Rhodopseudomonas palustris BisA53 homoserine O-acetyltransferase YP_783244.1 4865304 R 316055 CDS YP_783245.1 115526334 4362040 4866851..4867702 1 NC_008435.1 PFAM: Chorismate mutase; KEGG: rpb:RPB_4253 chorismate mutase; hypothetical protein 4867702 4362040 RPE_4341 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783245.1 4866851 D 316055 CDS YP_783246.1 115526335 4362041 4867730..4868827 1 NC_008435.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 4868827 4362041 RPE_4342 Rhodopseudomonas palustris BisA53 histidinol-phosphate aminotransferase YP_783246.1 4867730 D 316055 CDS YP_783247.1 115526336 4362042 4868824..4869759 1 NC_008435.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 4869759 4362042 RPE_4343 Rhodopseudomonas palustris BisA53 cyclohexadienyl dehydrogenase YP_783247.1 4868824 D 316055 CDS YP_783248.1 115526337 4362043 4869915..4870406 1 NC_008435.1 hypothetical protein 4870406 4362043 RPE_4344 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783248.1 4869915 D 316055 CDS YP_783249.1 115526338 4362044 complement(4870990..4871766) 1 NC_008435.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; Cupin 2, conserved barrel domain protein; KEGG: bxe:Bxe_A1049 transcriptional regulator, AraC family; AraC family transcriptional regulator 4871766 4362044 RPE_4345 Rhodopseudomonas palustris BisA53 AraC family transcriptional regulator YP_783249.1 4870990 R 316055 CDS YP_783250.1 115526339 4362045 complement(4871788..4872162) 1 NC_008435.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: pca:Pcar_2409 mannose-6-phosphate isomerase-like; cupin 4872162 4362045 RPE_4346 Rhodopseudomonas palustris BisA53 cupin YP_783250.1 4871788 R 316055 CDS YP_783251.1 115526340 4362046 4872541..4872801 1 NC_008435.1 hypothetical protein 4872801 4362046 RPE_4347 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783251.1 4872541 D 316055 CDS YP_783252.1 115526341 4362047 complement(4872944..4873150) 1 NC_008435.1 PFAM: protein of unknown function UPF0150; KEGG: rpb:RPB_4320 protein of unknown function UPF0150; hypothetical protein 4873150 4362047 RPE_4348 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783252.1 4872944 R 316055 CDS YP_783253.1 115526342 4362048 complement(4873683..4874663) 1 NC_008435.1 PFAM: Mg2+ transporter protein, CorA family protein; KEGG: rpc:RPC_4290 Mg2+ transporter protein, CorA-like; Mg2+ transporter 4874663 4362048 RPE_4349 Rhodopseudomonas palustris BisA53 Mg2+ transporter YP_783253.1 4873683 R 316055 CDS YP_783254.1 115526343 4362049 4875001..4875687 1 NC_008435.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rpb:RPB_1167 ErfK/YbiS/YcfS/YnhG; hypothetical protein 4875687 4362049 RPE_4350 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783254.1 4875001 D 316055 CDS YP_783255.1 115526344 4362050 complement(4875849..4876571) 1 NC_008435.1 PFAM: Extensin family protein; KEGG: rpc:RPC_4292 extensin-like; extensin family protein 4876571 4362050 RPE_4351 Rhodopseudomonas palustris BisA53 extensin family protein YP_783255.1 4875849 R 316055 CDS YP_783256.1 115526345 4362051 4876971..4878599 1 NC_008435.1 activates fatty acids by binding to coenzyme A; putative acyl-CoA synthetase 4878599 4362051 RPE_4352 Rhodopseudomonas palustris BisA53 putative acyl-CoA synthetase YP_783256.1 4876971 D 316055 CDS YP_783257.1 115526346 4362052 complement(4878737..4879093) 1 NC_008435.1 PFAM: protein of unknown function DUF559; KEGG: nwi:Nwi_2534 protein of unknown function DUF559; hypothetical protein 4879093 4362052 RPE_4353 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783257.1 4878737 R 316055 CDS YP_783258.1 115526347 4362053 4879306..4880151 1 NC_008435.1 KEGG: rpc:RPC_4295 hypothetical protein; hypothetical protein 4880151 4362053 RPE_4354 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783258.1 4879306 D 316055 CDS YP_783259.1 115526348 4362054 complement(4880272..4881204) 1 NC_008435.1 PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_4296 beta-lactamase-like; beta-lactamase domain-containing protein 4881204 4362054 RPE_4355 Rhodopseudomonas palustris BisA53 beta-lactamase domain-containing protein YP_783259.1 4880272 R 316055 CDS YP_783260.1 115526349 4362055 complement(4881488..4882702) 1 NC_008435.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rpd:RPD_1264 acyl-CoA dehydrogenase-like; acyl-CoA dehydrogenase domain-containing protein 4882702 4362055 RPE_4356 Rhodopseudomonas palustris BisA53 acyl-CoA dehydrogenase domain-containing protein YP_783260.1 4881488 R 316055 CDS YP_783261.1 115526350 4362056 complement(4882778..4883854) 1 NC_008435.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: rpc:RPC_4298 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 4883854 4362056 RPE_4357 Rhodopseudomonas palustris BisA53 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_783261.1 4882778 R 316055 CDS YP_783262.1 115526351 4362057 complement(4883943..4884302) 1 NC_008435.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rpd:RPD_1262 alkylhydroperoxidase AhpD core; alkylhydroperoxidase 4884302 4362057 RPE_4358 Rhodopseudomonas palustris BisA53 alkylhydroperoxidase YP_783262.1 4883943 R 316055 CDS YP_783263.1 115526352 4362058 complement(4884383..4884574) 1 NC_008435.1 KEGG: rpc:RPC_4302 hypothetical protein; hypothetical protein 4884574 4362058 RPE_4359 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783263.1 4884383 R 316055 CDS YP_783264.1 115526353 4362059 complement(4884705..4885454) 1 NC_008435.1 PFAM: cyclic nucleotide-binding; regulatory protein, Crp; KEGG: rpc:RPC_4303 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 4885454 4362059 RPE_4360 Rhodopseudomonas palustris BisA53 Crp/FNR family transcriptional regulator YP_783264.1 4884705 R 316055 CDS YP_783265.1 115526354 4362060 4885743..4886714 1 NC_008435.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: rpc:RPC_4304 PDZ/DHR/GLGF; PDZ/DHR/GLGF domain-containing protein 4886714 4362060 RPE_4361 Rhodopseudomonas palustris BisA53 PDZ/DHR/GLGF domain-containing protein YP_783265.1 4885743 D 316055 CDS YP_783266.1 115526355 4362061 complement(4886727..4887035) 1 NC_008435.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_4756 putative plasmid maintenance system antidote protein, XRE family; XRE family plasmid maintenance system antidote protein 4887035 4362061 RPE_4362 Rhodopseudomonas palustris BisA53 XRE family plasmid maintenance system antidote protein YP_783266.1 4886727 R 316055 CDS YP_783267.1 115526356 4362062 4887251..4889095 1 NC_008435.1 KEGG: bmb:BruAb1_0096 IlvD, dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 4889095 4362062 RPE_4363 Rhodopseudomonas palustris BisA53 dihydroxy-acid dehydratase YP_783267.1 4887251 D 316055 CDS YP_783268.1 115526357 4362063 complement(4890315..4890881) 1 NC_008435.1 KEGG: rpc:RPC_4320 hypothetical protein; hypothetical protein 4890881 4362063 RPE_4364 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783268.1 4890315 R 316055 CDS YP_783269.1 115526358 4362064 complement(4890968..4891366) 1 NC_008435.1 PFAM: regulatory protein, LysR; KEGG: rpc:RPC_4319 putative transcriptional regulator, ModE family; ModE family transcriptional regulator 4891366 4362064 RPE_4365 Rhodopseudomonas palustris BisA53 ModE family transcriptional regulator YP_783269.1 4890968 R 316055 CDS YP_783270.1 115526359 4362065 complement(4891426..4892289) 1 NC_008435.1 KEGG: rpc:RPC_4318 ModD protein; TIGRFAM: modD protein; PFAM: Quinolinate phosphoribosyl transferase; modD protein 4892289 4362065 RPE_4366 Rhodopseudomonas palustris BisA53 modD protein YP_783270.1 4891426 R 316055 CDS YP_783271.1 115526360 4362066 4892557..4893174 1 NC_008435.1 KEGG: rpc:RPC_4317 hypothetical protein; hypothetical protein 4893174 4362066 RPE_4367 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783271.1 4892557 D 316055 CDS YP_783272.1 115526361 4362067 4893171..4894043 1 NC_008435.1 KEGG: rpc:RPC_4316 hypothetical protein; hypothetical protein 4894043 4362067 RPE_4368 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783272.1 4893171 D 316055 CDS YP_783273.1 115526362 4362068 4894057..4894494 1 NC_008435.1 TIGRFAM: nitrogenase-associated protein; PFAM: arsenate reductase and related; KEGG: rpc:RPC_4315 nitrogenase-associated protein; nitrogenase-associated protein 4894494 4362068 RPE_4369 Rhodopseudomonas palustris BisA53 nitrogenase-associated protein YP_783273.1 4894057 D 316055 CDS YP_783274.1 115526363 4362069 4894616..4895377 1 NC_008435.1 PFAM: protein of unknown function DUF88; KEGG: rpa:RPA3960 hypothetical protein; hypothetical protein 4895377 4362069 RPE_4370 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783274.1 4894616 D 316055 CDS YP_783275.1 115526364 4362070 complement(4895441..4897114) 1 NC_008435.1 KEGG: rpb:RPB_1632 hypothetical protein; hypothetical protein 4897114 4362070 RPE_4371 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783275.1 4895441 R 316055 CDS YP_783276.1 115526365 4362071 complement(4897600..4898412) 1 NC_008435.1 PFAM: OmpA/MotB domain protein; KEGG: rpa:RPA2897 possible chemotaxis protein MotB2; OmpA/MotB domain-containing protein 4898412 4362071 RPE_4372 Rhodopseudomonas palustris BisA53 OmpA/MotB domain-containing protein YP_783276.1 4897600 R 316055 CDS YP_783277.1 115526366 4362072 complement(4898757..4900403) 1 NC_008435.1 KEGG: rpc:RPC_2948 hypothetical protein; hypothetical protein 4900403 4362072 RPE_4373 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783277.1 4898757 R 316055 CDS YP_783278.1 115526367 4362073 complement(4900665..4903700) 1 NC_008435.1 KEGG: son:SO1571 hypothetical protein; hypothetical protein 4903700 4362073 RPE_4374 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783278.1 4900665 R 316055 CDS YP_783279.1 115526368 4362074 complement(4903714..4905855) 1 NC_008435.1 KEGG: son:SO1571 hypothetical protein; hypothetical protein 4905855 4362074 RPE_4375 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783279.1 4903714 R 316055 CDS YP_783280.1 115526369 4362075 complement(4905837..4909880) 1 NC_008435.1 KEGG: lic:LIC13201 adenylate/guanylate cyclase; ATPase-like protein 4909880 4362075 RPE_4376 Rhodopseudomonas palustris BisA53 ATPase-like protein YP_783280.1 4905837 R 316055 CDS YP_783281.1 115526370 4362076 4910113..4910352 1 NC_008435.1 hypothetical protein 4910352 4362076 RPE_4377 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783281.1 4910113 D 316055 CDS YP_783282.1 115526371 4362077 4910598..4910834 1 NC_008435.1 KEGG: bja:bsl0098 hypothetical protein; hypothetical protein 4910834 4362077 RPE_4378 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783282.1 4910598 D 316055 CDS YP_783283.1 115526372 4362078 4910851..4911087 1 NC_008435.1 hypothetical protein 4911087 4362078 RPE_4379 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783283.1 4910851 D 316055 CDS YP_783284.1 115526373 4362080 4911249..4912232 1 NC_008435.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC, N-terminal domain; KEGG: rpc:RPC_4305 SUA5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC 4912232 4362080 RPE_4380 Rhodopseudomonas palustris BisA53 Sua5/YciO/YrdC/YwlC YP_783284.1 4911249 D 316055 CDS YP_783285.1 115526374 4362081 4912260..4913672 1 NC_008435.1 PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_4322 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 4913672 4362081 RPE_4381 Rhodopseudomonas palustris BisA53 FAD linked oxidase domain-containing protein YP_783285.1 4912260 D 316055 CDS YP_783286.1 115526375 4362082 complement(4913710..4914948) 1 NC_008435.1 KEGG: nfa:nfa55970 hypothetical protein; hypothetical protein 4914948 4362082 RPE_4382 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783286.1 4913710 R 316055 CDS YP_783287.1 115526376 4362083 complement(4915051..4915827) 1 NC_008435.1 PFAM: protein of unknown function DUF159; KEGG: rpc:RPC_4325 protein of unknown function DUF159; hypothetical protein 4915827 4362083 RPE_4383 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783287.1 4915051 R 316055 CDS YP_783288.1 115526377 4362084 4915893..4916405 1 NC_008435.1 KEGG: rpc:RPC_4326 hypothetical protein; hypothetical protein 4916405 4362084 RPE_4384 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783288.1 4915893 D 316055 CDS YP_783289.1 115526378 4362085 4916410..4916844 1 NC_008435.1 PFAM: NUDIX hydrolase; KEGG: rpc:RPC_4327 NUDIX hydrolase; NUDIX hydrolase 4916844 4362085 RPE_4385 Rhodopseudomonas palustris BisA53 NUDIX hydrolase YP_783289.1 4916410 D 316055 CDS YP_783290.1 115526379 4362086 4916919..4917296 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4328 hypothetical protein; hypothetical protein 4917296 4362086 RPE_4386 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783290.1 4916919 D 316055 CDS YP_783291.1 115526380 4362087 4917457..4917720 1 NC_008435.1 KEGG: rpc:RPC_4329 hypothetical protein; hypothetical protein 4917720 4362087 RPE_4387 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783291.1 4917457 D 316055 CDS YP_783292.1 115526381 4362088 complement(4917860..4919194) 1 NC_008435.1 PFAM: transposase, IS4 family protein; KEGG: sth:STH2086 transposase; transposase, IS4 family protein 4919194 4362088 RPE_4388 Rhodopseudomonas palustris BisA53 transposase, IS4 family protein YP_783292.1 4917860 R 316055 CDS YP_783293.1 115526382 4362089 complement(4919422..4920756) 1 NC_008435.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 4920756 4362089 RPE_4389 Rhodopseudomonas palustris BisA53 dihydroorotase YP_783293.1 4919422 R 316055 CDS YP_783294.1 115526383 4362090 4920912..4921793 1 NC_008435.1 PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: rpc:RPC_4331 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) 4921793 4362090 RPE_4390 Rhodopseudomonas palustris BisA53 glycine cleavage T protein (aminomethyl transferase) YP_783294.1 4920912 D 316055 CDS YP_783295.1 115526384 4362091 4921790..4922443 1 NC_008435.1 KEGG: bja:bll2553 3-methyladenine-DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 4922443 4362091 RPE_4391 Rhodopseudomonas palustris BisA53 DNA-3-methyladenine glycosylase I YP_783295.1 4921790 D 316055 CDS YP_783296.1 115526385 4362092 complement(4922434..4922604) 1 NC_008435.1 KEGG: rpd:RPD_1236 hypothetical protein; hypothetical protein 4922604 4362092 RPE_4392 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783296.1 4922434 R 316055 CDS YP_783297.1 115526386 4362093 4922787..4923401 1 NC_008435.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: rpa:RPA1065 metal dependent phosphohydrolase; metal dependent phosphohydrolase 4923401 4362093 RPE_4393 Rhodopseudomonas palustris BisA53 metal dependent phosphohydrolase YP_783297.1 4922787 D 316055 CDS YP_783298.1 115526387 4362094 4923479..4923985 1 NC_008435.1 KEGG: rpc:RPC_4334 hypothetical protein; hypothetical protein 4923985 4362094 RPE_4394 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783298.1 4923479 D 316055 CDS YP_783299.1 115526388 4362095 4923982..4924959 1 NC_008435.1 KEGG: rpc:RPC_4335 hypothetical protein; hypothetical protein 4924959 4362095 RPE_4395 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783299.1 4923982 D 316055 CDS YP_783300.1 115526389 4362096 4925039..4925563 1 NC_008435.1 KEGG: bja:blr5636 hypothetical protein; hypothetical protein 4925563 4362096 RPE_4396 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783300.1 4925039 D 316055 CDS YP_783301.1 115526390 4362097 4925569..4927464 1 NC_008435.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: ret:RHE_CH02180 putative adenylate cyclase protein; adenylate/guanylate cyclase 4927464 4362097 RPE_4397 Rhodopseudomonas palustris BisA53 adenylate/guanylate cyclase YP_783301.1 4925569 D 316055 CDS YP_783302.1 115526391 4362098 complement(4927461..4928045) 1 NC_008435.1 KEGG: rpc:RPC_4336 hypothetical protein; hypothetical protein 4928045 4362098 RPE_4398 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783302.1 4927461 R 316055 CDS YP_783303.1 115526392 4362099 complement(4928164..4929144) 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpd:RPD_1230 alcohol dehydrogenase, zinc-binding; alcohol dehydrogenase 4929144 4362099 RPE_4399 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_783303.1 4928164 R 316055 CDS YP_783304.1 115526393 4362100 4929515..4930627 1 NC_008435.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 4930627 4362100 RPE_4400 Rhodopseudomonas palustris BisA53 quinolinate synthetase YP_783304.1 4929515 D 316055 CDS YP_783305.1 115526394 4362101 4930685..4932292 1 NC_008435.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 4932292 4362101 RPE_4401 Rhodopseudomonas palustris BisA53 L-aspartate oxidase YP_783305.1 4930685 D 316055 CDS YP_783306.1 115526395 4362102 4932308..4933189 1 NC_008435.1 KEGG: rpb:RPB_1105 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 4933189 4362102 RPE_4402 Rhodopseudomonas palustris BisA53 nicotinate-nucleotide pyrophosphorylase YP_783306.1 4932308 D 316055 CDS YP_783307.1 115526396 4362103 4933504..4934166 1 NC_008435.1 KEGG: rpc:RPC_4341 hypothetical protein; hypothetical protein 4934166 4362103 RPE_4403 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783307.1 4933504 D 316055 CDS YP_783308.1 115526397 4362104 complement(4934346..4935809) 1 NC_008435.1 PFAM: cell wall hydrolase, SleB; KEGG: rpc:RPC_4342 cell wall hydrolase, SleB; cell wall hydrolase SleB 4935809 4362104 RPE_4404 Rhodopseudomonas palustris BisA53 cell wall hydrolase SleB YP_783308.1 4934346 R 316055 CDS YP_783309.1 115526398 4362105 complement(4936218..4939241) 1 NC_008435.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 4939241 4362105 RPE_4405 Rhodopseudomonas palustris BisA53 pyruvate phosphate dikinase YP_783309.1 4936218 R 316055 CDS YP_783310.1 115526399 4362106 complement(4939335..4939478) 1 NC_008435.1 KEGG: rpc:RPC_4344 hypothetical protein; hypothetical protein 4939478 4362106 RPE_4406 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783310.1 4939335 R 316055 CDS YP_783311.1 115526400 4362107 4939780..4940124 1 NC_008435.1 PFAM: protein of unknown function DUF1236; KEGG: rpc:RPC_4345 hypothetical protein; hypothetical protein 4940124 4362107 RPE_4407 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783311.1 4939780 D 316055 CDS YP_783312.1 115526401 4362108 complement(4940189..4941286) 1 NC_008435.1 KEGG: rpd:RPD_1222 hypothetical protein; hypothetical protein 4941286 4362108 RPE_4408 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783312.1 4940189 R 316055 CDS YP_783313.1 115526402 4362109 complement(4941607..4943841) 1 NC_008435.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 4943841 glyS 4362109 glyS Rhodopseudomonas palustris BisA53 glycyl-tRNA synthetase subunit beta YP_783313.1 4941607 R 316055 CDS YP_783314.1 115526403 4362110 complement(4943841..4944275) 1 NC_008435.1 PFAM: protein of unknown function DUF559; KEGG: rpd:RPD_1220 protein of unknown function DUF559; hypothetical protein 4944275 4362110 RPE_4410 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783314.1 4943841 R 316055 CDS YP_783315.1 115526404 4362111 complement(4944306..4945268) 1 NC_008435.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 4945268 glyQ 4362111 glyQ Rhodopseudomonas palustris BisA53 glycyl-tRNA synthetase subunit alpha YP_783315.1 4944306 R 316055 CDS YP_783316.1 115526405 4362112 complement(4945773..4945967) 1 NC_008435.1 KEGG: rpc:RPC_4350 hypothetical protein; hypothetical protein 4945967 4362112 RPE_4412 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783316.1 4945773 R 316055 CDS YP_783317.1 115526406 4362113 complement(4946067..4946969) 1 NC_008435.1 PFAM: Enoyl-CoA hydratase/isomerase; peptidase S49; KEGG: rpc:RPC_4351 peptidase S49; peptidase S49 4946969 4362113 RPE_4413 Rhodopseudomonas palustris BisA53 peptidase S49 YP_783317.1 4946067 R 316055 CDS YP_783318.1 115526407 4362114 complement(4947210..4947956) 1 NC_008435.1 PFAM: methyltransferase small; Methyltransferase type 12; KEGG: rpc:RPC_4352 methyltransferase small; methyltransferase small 4947956 4362114 RPE_4414 Rhodopseudomonas palustris BisA53 methyltransferase small YP_783318.1 4947210 R 316055 CDS YP_783319.1 115526408 4362115 complement(4947967..4948194) 1 NC_008435.1 KEGG: rpd:RPD_1215 hypothetical protein; hypothetical protein 4948194 4362115 RPE_4415 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783319.1 4947967 R 316055 CDS YP_783320.1 115526409 4362116 4948381..4949406 1 NC_008435.1 PFAM: Polyprenyl synthetase; KEGG: rpa:RPA1040 octaprenyl-diphosphate synthase; farnesyltranstransferase 4949406 4362116 RPE_4416 Rhodopseudomonas palustris BisA53 farnesyltranstransferase YP_783320.1 4948381 D 316055 CDS YP_783321.1 115526410 4362117 complement(4949437..4949781) 1 NC_008435.1 hypothetical protein 4949781 4362117 RPE_4417 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783321.1 4949437 R 316055 CDS YP_783322.1 115526411 4362118 4949810..4950202 1 NC_008435.1 hypothetical protein 4950202 4362118 RPE_4418 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783322.1 4949810 D 316055 CDS YP_783323.1 115526412 4362119 complement(4950199..4951095) 1 NC_008435.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 4951095 4362119 RPE_4419 Rhodopseudomonas palustris BisA53 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_783323.1 4950199 R 316055 CDS YP_783324.1 115526413 4362120 complement(4951101..4952882) 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpc:RPC_4357 tetratricopeptide TPR_2; TPR repeat-containing protein 4952882 4362120 RPE_4420 Rhodopseudomonas palustris BisA53 TPR repeat-containing protein YP_783324.1 4951101 R 316055 CDS YP_783325.1 115526414 4362121 complement(4953125..4954783) 1 NC_008435.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: rpc:RPC_4358 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 4954783 4362121 RPE_4421 Rhodopseudomonas palustris BisA53 electron-transferring-flavoprotein dehydrogenase YP_783325.1 4953125 R 316055 CDS YP_783326.1 115526415 4362122 4955109..4955930 1 NC_008435.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rpc:RPC_4359 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein 4955930 4362122 RPE_4422 Rhodopseudomonas palustris BisA53 phage SPO1 DNA polymerase-like protein YP_783326.1 4955109 D 316055 CDS YP_783327.1 115526416 4362123 complement(4955936..4957447) 1 NC_008435.1 KEGG: rpc:RPC_4360 hypothetical protein; hypothetical protein 4957447 4362123 RPE_4423 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783327.1 4955936 R 316055 CDS YP_783328.1 115526417 4362124 complement(4957575..4958411) 1 NC_008435.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 4958411 rnhB 4362124 rnhB Rhodopseudomonas palustris BisA53 ribonuclease HII YP_783328.1 4957575 R 316055 CDS YP_783329.1 115526418 4362125 complement(4958555..4959763) 1 NC_008435.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpc:RPC_4362 radical SAM; radical SAM domain-containing protein 4959763 4362125 RPE_4425 Rhodopseudomonas palustris BisA53 radical SAM domain-containing protein YP_783329.1 4958555 R 316055 CDS YP_783330.1 115526419 4362126 4959942..4960502 1 NC_008435.1 KEGG: rpc:RPC_4363 glycosyl transferase, family 2; glycosyl transferase family protein 4960502 4362126 RPE_4426 Rhodopseudomonas palustris BisA53 glycosyl transferase family protein YP_783330.1 4959942 D 316055 CDS YP_783331.1 115526420 4362127 4960591..4961541 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: bja:bll2512 putative acetyltransferase; MarR family transcriptional regulator 4961541 4362127 RPE_4427 Rhodopseudomonas palustris BisA53 MarR family transcriptional regulator YP_783331.1 4960591 D 316055 CDS YP_783332.1 115526421 4362128 complement(4961594..4961836) 1 NC_008435.1 hypothetical protein 4961836 4362128 RPE_4428 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783332.1 4961594 R 316055 CDS YP_783333.1 115526422 4362129 complement(4961868..4962416) 1 NC_008435.1 TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: rpd:RPD_1202 molybdenum cofactor biosynthesis protein; molybdenum cofactor biosynthesis protein B 4962416 4362129 RPE_4429 Rhodopseudomonas palustris BisA53 molybdenum cofactor biosynthesis protein B YP_783333.1 4961868 R 316055 CDS YP_783334.1 115526423 4362130 complement(4962578..4963504) 1 NC_008435.1 PFAM: protein of unknown function, zinc metallopeptidase putative; KEGG: rpc:RPC_4365 protein of unknown function, zinc metallopeptidase putative; hypothetical protein 4963504 4362130 RPE_4430 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783334.1 4962578 R 316055 CDS YP_783335.1 115526424 4362131 4963779..4964918 1 NC_008435.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rpc:RPC_4366 DNA methylase N-4/N-6; DNA methylase N-4/N-6 domain-containing protein 4964918 4362131 RPE_4431 Rhodopseudomonas palustris BisA53 DNA methylase N-4/N-6 domain-containing protein YP_783335.1 4963779 D 316055 CDS YP_783336.1 115526425 4362132 4965059..4965397 1 NC_008435.1 KEGG: rpc:RPC_4367 hypothetical protein; hypothetical protein 4965397 4362132 RPE_4432 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783336.1 4965059 D 316055 CDS YP_783337.1 115526426 4362133 complement(4965434..4966534) 1 NC_008435.1 KEGG: rpc:RPC_4368 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; A/G-specific adenine glycosylase 4966534 4362133 RPE_4433 Rhodopseudomonas palustris BisA53 A/G-specific adenine glycosylase YP_783337.1 4965434 R 316055 CDS YP_783338.1 115526427 4362134 4966616..4966936 1 NC_008435.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: rpc:RPC_4370 plasmid maintenance system antidote protein, XRE family; XRE family plasmid maintenance system antidote protein 4966936 4362134 RPE_4434 Rhodopseudomonas palustris BisA53 XRE family plasmid maintenance system antidote protein YP_783338.1 4966616 D 316055 CDS YP_783339.1 115526428 4362135 4966976..4967452 1 NC_008435.1 PFAM: protein of unknown function DUF1159; KEGG: rpc:RPC_4371 protein of unknown function DUF1159; hypothetical protein 4967452 4362135 RPE_4435 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783339.1 4966976 D 316055 CDS YP_783340.1 115526429 4362136 4967554..4968225 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpc:RPC_4372 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 4968225 4362136 RPE_4436 Rhodopseudomonas palustris BisA53 twin-arginine translocation pathway signal YP_783340.1 4967554 D 316055 CDS YP_783341.1 115526430 4362137 complement(4968490..4969158) 1 NC_008435.1 KEGG: rpc:RPC_4379 hypothetical protein; hypothetical protein 4969158 4362137 RPE_4437 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783341.1 4968490 R 316055 CDS YP_783342.1 115526431 4362138 complement(4969215..4970033) 1 NC_008435.1 KEGG: rpc:RPC_4378 hypothetical protein; hypothetical protein 4970033 4362138 RPE_4438 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783342.1 4969215 R 316055 CDS YP_783343.1 115526432 4362139 complement(4970112..4970411) 1 NC_008435.1 hypothetical protein 4970411 4362139 RPE_4439 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783343.1 4970112 R 316055 CDS YP_783344.1 115526433 4362140 complement(4970393..4971505) 1 NC_008435.1 PFAM: peptidase M48, Ste24p; KEGG: rpb:RPB_4314 peptidase M48, Ste24p; peptidase M48, Ste24p 4971505 4362140 RPE_4440 Rhodopseudomonas palustris BisA53 peptidase M48, Ste24p YP_783344.1 4970393 R 316055 CDS YP_783345.1 115526434 4362141 complement(4971741..4972298) 1 NC_008435.1 PFAM: LemA family protein; KEGG: rpb:RPB_4313 LemA; LemA family protein 4972298 4362141 RPE_4441 Rhodopseudomonas palustris BisA53 LemA family protein YP_783345.1 4971741 R 316055 CDS YP_783346.1 115526435 4362142 complement(4972457..4973449) 1 NC_008435.1 KEGG: rpd:RPD_1193 methyltransferase type 11; hypothetical protein 4973449 4362142 RPE_4442 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783346.1 4972457 R 316055 CDS YP_783347.1 115526436 4362143 complement(4973706..4977170) 1 NC_008435.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: rpc:RPC_4374 chromosome segregation protein SMC; chromosome segregation protein SMC 4977170 4362143 RPE_4443 Rhodopseudomonas palustris BisA53 chromosome segregation protein SMC YP_783347.1 4973706 R 316055 CDS YP_783348.1 115526437 4362144 complement(4977940..4978401) 1 NC_008435.1 KEGG: rpa:RPA3586 hypothetical protein; hypothetical protein 4978401 4362144 RPE_4444 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783348.1 4977940 R 316055 CDS YP_783349.1 115526438 4362145 complement(4978648..4979382) 1 NC_008435.1 KEGG: nmu:Nmul_A0122 hypothetical protein; hypothetical protein 4979382 4362145 RPE_4445 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783349.1 4978648 R 316055 CDS YP_783350.1 115526439 4362147 complement(4981421..4983583) 1 NC_008435.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; anthranilate synthase 4983583 4362147 RPE_4447 Rhodopseudomonas palustris BisA53 anthranilate synthase YP_783350.1 4981421 R 316055 CDS YP_783351.1 115526440 4362148 complement(4983816..4984463) 1 NC_008435.1 KEGG: rpc:RPC_4391 hypothetical protein; hypothetical protein 4984463 4362148 RPE_4448 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783351.1 4983816 R 316055 CDS YP_783352.1 115526441 4362149 complement(4984460..4984876) 1 NC_008435.1 PFAM: endodeoxyribonuclease RusA; KEGG: rpc:RPC_4392 hypothetical protein; endodeoxyribonuclease RusA 4984876 4362149 RPE_4449 Rhodopseudomonas palustris BisA53 endodeoxyribonuclease RusA YP_783352.1 4984460 R 316055 CDS YP_783353.1 115526442 4362150 complement(4985040..4985660) 1 NC_008435.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpd:RPD_4215 methyltransferase type 12; type 11 methyltransferase 4985660 4362150 RPE_4450 Rhodopseudomonas palustris BisA53 type 11 methyltransferase YP_783353.1 4985040 R 316055 CDS YP_783354.1 115526443 4362151 complement(4985686..4987008) 1 NC_008435.1 PFAM: ABC-1 domain protein; KEGG: rpd:RPD_4216 ABC-1; hypothetical protein 4987008 4362151 RPE_4451 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783354.1 4985686 R 316055 CDS YP_783355.1 115526444 4362152 4987573..4987794 1 NC_008435.1 KEGG: rpc:RPC_4390 hypothetical protein; hypothetical protein 4987794 4362152 RPE_4452 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783355.1 4987573 D 316055 CDS YP_783356.1 115526445 4362153 complement(4987751..4987969) 1 NC_008435.1 PFAM: PhnA protein; KEGG: rpc:RPC_4393 PhnA protein; PhnA protein 4987969 4362153 RPE_4453 Rhodopseudomonas palustris BisA53 PhnA protein YP_783356.1 4987751 R 316055 CDS YP_783357.1 115526446 4362154 complement(4988049..4988324) 1 NC_008435.1 KEGG: rpc:RPC_4395 hypothetical protein; hypothetical protein 4988324 4362154 RPE_4454 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783357.1 4988049 R 316055 CDS YP_783358.1 115526447 4362155 complement(4988667..4990577) 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpc:RPC_4396 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4990577 4362155 RPE_4455 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_783358.1 4988667 R 316055 CDS YP_783359.1 115526448 4362156 complement(4990710..4991471) 1 NC_008435.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpc:RPC_4397 tetratricopeptide TPR_2; TPR repeat-containing protein 4991471 4362156 RPE_4456 Rhodopseudomonas palustris BisA53 TPR repeat-containing protein YP_783359.1 4990710 R 316055 CDS YP_783360.1 115526449 4362157 complement(4991478..4992281) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_4328 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4992281 4362157 RPE_4457 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_783360.1 4991478 R 316055 CDS YP_783361.1 115526450 4362158 4992542..4994374 1 NC_008435.1 KEGG: nha:Nham_2708 hypothetical protein; hypothetical protein 4994374 4362158 RPE_4458 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783361.1 4992542 D 316055 CDS YP_783362.1 115526451 4362159 complement(4994403..4996178) 1 NC_008435.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpa:RPA4507 elongator protein 3/MiaB/NifB; radical SAM domain-containing protein 4996178 4362159 RPE_4459 Rhodopseudomonas palustris BisA53 radical SAM domain-containing protein YP_783362.1 4994403 R 316055 CDS YP_783363.1 115526452 4362160 complement(4996339..4996713) 1 NC_008435.1 KEGG: rpc:RPC_4398 hypothetical protein; hypothetical protein 4996713 4362160 RPE_4460 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783363.1 4996339 R 316055 CDS YP_783364.1 115526453 4362161 complement(4996710..4998833) 1 NC_008435.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rpc:RPC_4399 TRAP transporter, 4TM/12TM fusion protein; TRAP transporter, 4TM/12TM fusion protein 4998833 4362161 RPE_4461 Rhodopseudomonas palustris BisA53 TRAP transporter, 4TM/12TM fusion protein YP_783364.1 4996710 R 316055 CDS YP_783365.1 115526454 4362162 complement(4998993..4999940) 1 NC_008435.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rpc:RPC_4400 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 4999940 4362162 RPE_4462 Rhodopseudomonas palustris BisA53 TRAP transporter solute receptor TAXI family protein YP_783365.1 4998993 R 316055 CDS YP_783366.1 115526455 4362163 5000158..5001165 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Uncharacterized protein UPF0065; KEGG: rpb:RPB_4334 twin-arginine translocation pathway signal; hypothetical protein 5001165 4362163 RPE_4463 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783366.1 5000158 D 316055 CDS YP_783367.1 115526456 4362164 5001647..5003467 1 NC_008435.1 KEGG: gsu:GSU2675 hypothetical protein; hypothetical protein 5003467 4362164 RPE_4464 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783367.1 5001647 D 316055 CDS YP_783368.1 115526457 4362165 5003635..5004852 1 NC_008435.1 PFAM: EAL domain protein; KEGG: rpd:RPD_4230 putative cylclic diguanylate phosphodiesterase; response regulator receiver modulated diguanylate phosphodiesterase 5004852 4362165 RPE_4465 Rhodopseudomonas palustris BisA53 response regulator receiver modulated diguanylate phosphodiesterase YP_783368.1 5003635 D 316055 CDS YP_783369.1 115526458 4362166 complement(5004863..5005339) 1 NC_008435.1 KEGG: rpc:RPC_4403 hypothetical protein; hypothetical protein 5005339 4362166 RPE_4466 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783369.1 5004863 R 316055 CDS YP_783370.1 115526459 4362167 5005599..5005910 1 NC_008435.1 KEGG: rpc:RPC_4404 hypothetical protein; hypothetical protein 5005910 4362167 RPE_4467 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783370.1 5005599 D 316055 CDS YP_783371.1 115526460 4362168 complement(5005959..5008016) 1 NC_008435.1 KEGG: zmo:ZMO1548 squalene--hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; squalene cyclase 5008016 4362168 RPE_4468 Rhodopseudomonas palustris BisA53 squalene cyclase YP_783371.1 5005959 R 316055 CDS YP_783372.1 115526461 4362169 5008044..5008412 1 NC_008435.1 hypothetical protein 5008412 4362169 RPE_4469 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783372.1 5008044 D 316055 CDS YP_783373.1 115526462 4362170 complement(5008415..5009545) 1 NC_008435.1 KEGG: rpb:RPB_4338 hypothetical protein; hypothetical protein 5009545 4362170 RPE_4470 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783373.1 5008415 R 316055 CDS YP_783374.1 115526463 4362171 complement(5009864..5010490) 1 NC_008435.1 PFAM: NUDIX hydrolase; KEGG: rpb:RPB_4339 NUDIX hydrolase; NUDIX hydrolase 5010490 4362171 RPE_4471 Rhodopseudomonas palustris BisA53 NUDIX hydrolase YP_783374.1 5009864 R 316055 CDS YP_783375.1 115526464 4362172 5010557..5010985 1 NC_008435.1 PFAM: thioesterase superfamily protein; KEGG: rpb:RPB_4340 thioesterase superfamily; thioesterase superfamily protein 5010985 4362172 RPE_4472 Rhodopseudomonas palustris BisA53 thioesterase superfamily protein YP_783375.1 5010557 D 316055 CDS YP_783376.1 115526465 4362173 5011146..5011394 1 NC_008435.1 PFAM: helix-turn-helix domain protein; KEGG: rru:Rru_A2442 transcriptional regulator, XRE family; XRE family transcriptional regulator 5011394 4362173 RPE_4473 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_783376.1 5011146 D 316055 CDS YP_783377.1 115526466 4362175 complement(5012841..5014100) 1 NC_008435.1 PFAM: HipA domain protein; KEGG: sat:SYN_02732 protein HipA; HipA domain-containing protein 5014100 4362175 RPE_4476 Rhodopseudomonas palustris BisA53 HipA domain-containing protein YP_783377.1 5012841 R 316055 CDS YP_783378.1 115526467 4362176 complement(5014097..5014324) 1 NC_008435.1 PFAM: helix-turn-helix domain protein; KEGG: ftl:FTL_1126 transcriptional regulator; XRE family transcriptional regulator 5014324 4362176 RPE_4477 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_783378.1 5014097 R 316055 CDS YP_783379.1 115526468 4362177 5014584..5015096 1 NC_008435.1 hypothetical protein 5015096 4362177 RPE_4478 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783379.1 5014584 D 316055 CDS YP_783380.1 115526469 4362179 complement(5015957..5016142) 1 NC_008435.1 PFAM: protein of unknown function DUF329; KEGG: rpc:RPC_4413 protein of unknown function DUF329; zinc-binding protein 5016142 4362179 RPE_4479 Rhodopseudomonas palustris BisA53 zinc-binding protein YP_783380.1 5015957 R 316055 CDS YP_783381.1 115526470 4362180 complement(5016132..5016755) 1 NC_008435.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 5016755 4362180 RPE_4480 Rhodopseudomonas palustris BisA53 Maf-like protein YP_783381.1 5016132 R 316055 CDS YP_783382.1 115526471 4362181 complement(5016885..5018039) 1 NC_008435.1 KEGG: rpb:RPB_4347 hypothetical protein; hypothetical protein 5018039 4362181 RPE_4481 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783382.1 5016885 R 316055 CDS YP_783383.1 115526472 4362182 complement(5018134..5018604) 1 NC_008435.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpc:RPC_4415 protein tyrosine phosphatase; protein tyrosine phosphatase 5018604 4362182 RPE_4482 Rhodopseudomonas palustris BisA53 protein tyrosine phosphatase YP_783383.1 5018134 R 316055 CDS YP_783384.1 115526473 4362183 complement(5018663..5019154) 1 NC_008435.1 PFAM: Uncharacterised conserved protein UCP032146; KEGG: rpb:RPB_4349 uncharacterised conserved protein UCP032146; hypothetical protein 5019154 4362183 RPE_4483 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783384.1 5018663 R 316055 CDS YP_783385.1 115526474 4362184 complement(5019151..5020446) 1 NC_008435.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 5020446 hisD 4362184 hisD Rhodopseudomonas palustris BisA53 histidinol dehydrogenase YP_783385.1 5019151 R 316055 CDS YP_783386.1 115526475 4362185 complement(5020734..5021831) 1 NC_008435.1 PFAM: transposase, IS4 family protein; KEGG: rpc:RPC_2070 transposase, IS4; transposase, IS4 family protein 5021831 4362185 RPE_4485 Rhodopseudomonas palustris BisA53 transposase, IS4 family protein YP_783386.1 5020734 R 316055 CDS YP_783387.1 115526476 4362187 complement(5023347..5023790) 1 NC_008435.1 KEGG: rpd:RPD_4280 hypothetical protein; hypothetical protein 5023790 4362187 RPE_4487 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783387.1 5023347 R 316055 CDS YP_783388.1 115526477 4362188 complement(5023806..5025095) 1 NC_008435.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5025095 4362188 RPE_4488 Rhodopseudomonas palustris BisA53 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_783388.1 5023806 R 316055 CDS YP_783389.1 115526478 4362189 complement(5025399..5026082) 1 NC_008435.1 KEGG: rpc:RPC_4419 hypothetical protein; hypothetical protein 5026082 4362189 RPE_4489 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783389.1 5025399 R 316055 CDS YP_783390.1 115526479 4362190 complement(5026220..5027044) 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_4420 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 5027044 4362190 RPE_4490 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_783390.1 5026220 R 316055 CDS YP_783391.1 115526480 4362191 complement(5027143..5027643) 1 NC_008435.1 KEGG: rpb:RPB_4355 hypothetical protein; hypothetical protein 5027643 4362191 RPE_4491 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783391.1 5027143 R 316055 CDS YP_783392.1 115526481 4362192 complement(5027808..5028728) 1 NC_008435.1 PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6868 alpha/beta hydrolase; alpha/beta hydrolase fold protein 5028728 4362192 RPE_4492 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase fold protein YP_783392.1 5027808 R 316055 CDS YP_783393.1 115526482 4362193 complement(5028778..5029086) 1 NC_008435.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: bja:blr1249 hypothetical protein; ethyl tert-butyl ether degradation EthD 5029086 4362193 RPE_4493 Rhodopseudomonas palustris BisA53 ethyl tert-butyl ether degradation EthD YP_783393.1 5028778 R 316055 CDS YP_783394.1 115526483 4362194 complement(5029156..5030862) 1 NC_008435.1 PFAM: cyclic nucleotide-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: rpc:RPC_4421 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5030862 4362194 RPE_4494 Rhodopseudomonas palustris BisA53 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_783394.1 5029156 R 316055 CDS YP_783395.1 115526484 4362195 5031163..5031609 1 NC_008435.1 KEGG: rpc:RPC_4422 hypothetical protein; hypothetical protein 5031609 4362195 RPE_4495 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783395.1 5031163 D 316055 CDS YP_783396.1 115526485 4362197 complement(5032026..5033168) 1 NC_008435.1 PFAM: regulatory protein, LuxR; Sigma-70, region 4 type 2; KEGG: rpd:RPD_2373 regulatory protein, LuxR; LuxR family transcriptional regulator 5033168 4362197 RPE_4496 Rhodopseudomonas palustris BisA53 LuxR family transcriptional regulator YP_783396.1 5032026 R 316055 CDS YP_783397.1 115526486 4362198 complement(5033465..5034208) 1 NC_008435.1 PFAM: regulatory protein, LuxR; KEGG: rpd:RPD_2372 regulatory protein, LuxR; LuxR family transcriptional regulator 5034208 4362198 RPE_4497 Rhodopseudomonas palustris BisA53 LuxR family transcriptional regulator YP_783397.1 5033465 R 316055 CDS YP_783398.1 115526487 4362199 complement(5034401..5034901) 1 NC_008435.1 KEGG: rpd:RPD_2371 hypothetical protein; hypothetical protein 5034901 4362199 RPE_4498 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783398.1 5034401 R 316055 CDS YP_783399.1 115526488 4362200 complement(5035013..5037766) 1 NC_008435.1 structural flagella protein; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellin 5037766 4362200 RPE_4499 Rhodopseudomonas palustris BisA53 flagellin YP_783399.1 5035013 R 316055 CDS YP_783400.1 115526489 4362201 complement(5038372..5039493) 1 NC_008435.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: dvu:DVU2218 GTP-binding protein, putative; ribosome small subunit-dependent GTPase A 5039493 4362201 RPE_4500 Rhodopseudomonas palustris BisA53 ribosome small subunit-dependent GTPase A YP_783400.1 5038372 R 316055 CDS YP_783401.1 115526490 4362202 complement(5039621..5039944) 1 NC_008435.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: rpa:RPA0707 putative periplasmic divalent cation resistance protein CutA; CutA1 divalent ion tolerance protein 5039944 4362202 RPE_4501 Rhodopseudomonas palustris BisA53 CutA1 divalent ion tolerance protein YP_783401.1 5039621 R 316055 CDS YP_783402.1 115526491 4362203 5039987..5040202 1 NC_008435.1 TIGRFAM: putative regulatory protein, FmdB family; KEGG: rpd:RPD_0644 hypothetical protein; FmdB family regulatory protein 5040202 4362203 RPE_4502 Rhodopseudomonas palustris BisA53 FmdB family regulatory protein YP_783402.1 5039987 D 316055 CDS YP_783403.1 115526492 4362204 complement(5040221..5041702) 1 NC_008435.1 PFAM: ADP-ribosylation/Crystallin J1; SMART: protein tyrosine phosphatase, catalytic region; KEGG: rpc:RPC_0422 ADP-ribosylation/crystallin J1; ADP-ribosylation/crystallin J1 5041702 4362204 RPE_4503 Rhodopseudomonas palustris BisA53 ADP-ribosylation/crystallin J1 YP_783403.1 5040221 R 316055 CDS YP_783404.1 115526493 4362205 complement(5041794..5042525) 1 NC_008435.1 KEGG: rpc:RPC_0423 hypothetical protein; hypothetical protein 5042525 4362205 RPE_4504 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783404.1 5041794 R 316055 CDS YP_783405.1 115526494 4362206 complement(5042625..5043830) 1 NC_008435.1 KEGG: rpc:RPC_1274 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyltransferase 5043830 4362206 RPE_4505 Rhodopseudomonas palustris BisA53 S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyltransferase YP_783405.1 5042625 R 316055 CDS YP_783406.1 115526495 4362207 5043971..5044675 1 NC_008435.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rpc:RPC_1275 putative methyltransferase; type 12 methyltransferase 5044675 4362207 RPE_4506 Rhodopseudomonas palustris BisA53 type 12 methyltransferase YP_783406.1 5043971 D 316055 CDS YP_783407.1 115526496 4362208 5044672..5044995 1 NC_008435.1 PFAM: small multidrug resistance protein; KEGG: rpc:RPC_1276 small multidrug resistance protein; small multidrug resistance protein 5044995 4362208 RPE_4507 Rhodopseudomonas palustris BisA53 small multidrug resistance protein YP_783407.1 5044672 D 316055 CDS YP_783408.1 115526497 4362209 complement(5045017..5046060) 1 NC_008435.1 PFAM: Mg2+ transporter protein, CorA family protein; KEGG: rpc:RPC_1278 Mg2+ transporter protein, CorA-like; Mg2+ transporter protein, CorA family protein 5046060 4362209 RPE_4508 Rhodopseudomonas palustris BisA53 Mg2+ transporter protein, CorA family protein YP_783408.1 5045017 R 316055 CDS YP_783409.1 115526498 4362210 complement(5046220..5046822) 1 NC_008435.1 PFAM: NUDIX hydrolase; KEGG: rpc:RPC_4436 NUDIX hydrolase; NUDIX hydrolase 5046822 4362210 RPE_4509 Rhodopseudomonas palustris BisA53 NUDIX hydrolase YP_783409.1 5046220 R 316055 CDS YP_783410.1 115526499 4362211 5046976..5048217 1 NC_008435.1 KEGG: rpc:RPC_4438 hypothetical protein; hypothetical protein 5048217 4362211 RPE_4510 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783410.1 5046976 D 316055 CDS YP_783411.1 115526500 4362212 5048563..5049162 1 NC_008435.1 KEGG: rpc:RPC_4441 hypothetical protein; hypothetical protein 5049162 4362212 RPE_4511 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783411.1 5048563 D 316055 CDS YP_783412.1 115526501 4362213 complement(5049197..5049403) 1 NC_008435.1 TIGRFAM: Molybdenum-pterin binding; PFAM: TOBE domain protein; KEGG: rpc:RPC_4442 molybdenum-pterin binding domain; molybdenum-pterin binding 5049403 4362213 RPE_4512 Rhodopseudomonas palustris BisA53 molybdenum-pterin binding YP_783412.1 5049197 R 316055 CDS YP_783413.1 115526502 4362214 5049647..5050201 1 NC_008435.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rpc:RPC_4443 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 5050201 4362214 RPE_4513 Rhodopseudomonas palustris BisA53 alkyl hydroperoxide reductase YP_783413.1 5049647 D 316055 CDS YP_783414.1 115526503 4362215 5050207..5050752 1 NC_008435.1 TIGRFAM: alkylhydroperoxidase, AhpD family; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rpc:RPC_4444 alkylhydroperoxidase, AhpD family; alkylhydroperoxidase 5050752 4362215 RPE_4514 Rhodopseudomonas palustris BisA53 alkylhydroperoxidase YP_783414.1 5050207 D 316055 CDS YP_783415.1 115526504 4362216 complement(5050978..5051274) 1 NC_008435.1 KEGG: rpc:RPC_4445 ferredoxin like protein, FixX; ferredoxin like protein, fixX 5051274 4362216 RPE_4515 Rhodopseudomonas palustris BisA53 ferredoxin like protein, fixX YP_783415.1 5050978 R 316055 CDS YP_783416.1 115526505 4362217 complement(5051332..5052639) 1 NC_008435.1 PFAM: monooxygenase, FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; KEGG: rpc:RPC_4446 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 5052639 4362217 RPE_4516 Rhodopseudomonas palustris BisA53 electron-transferring-flavoprotein dehydrogenase YP_783416.1 5051332 R 316055 CDS YP_783417.1 115526506 4362218 complement(5052651..5053757) 1 NC_008435.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: rpc:RPC_4447 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 5053757 4362218 RPE_4517 Rhodopseudomonas palustris BisA53 electron transfer flavoprotein subunit beta YP_783417.1 5052651 R 316055 CDS YP_783418.1 115526507 4362219 complement(5053785..5054630) 1 NC_008435.1 PFAM: electron transfer flavoprotein beta-subunit; KEGG: rpc:RPC_4448 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 5054630 4362219 RPE_4518 Rhodopseudomonas palustris BisA53 electron transfer flavoprotein subunit beta YP_783418.1 5053785 R 316055 CDS YP_783419.1 115526508 4362220 complement(5054961..5055299) 1 NC_008435.1 associates with NifD and may protect the nitrogenase Fe-Mo protein from oxidative damage; nitrogenase stabilizing/protective protein 5055299 nifW 4362220 nifW Rhodopseudomonas palustris BisA53 nitrogenase stabilizing/protective protein YP_783419.1 5054961 R 316055 CDS YP_783420.1 115526509 4362221 complement(5055336..5056496) 1 NC_008435.1 TIGRFAM: homocitrate synthase; PFAM: pyruvate carboxyltransferase; KEGG: rpc:RPC_4450 pyruvate carboxyltransferase; homocitrate synthase 5056496 4362221 RPE_4520 Rhodopseudomonas palustris BisA53 homocitrate synthase YP_783420.1 5055336 R 316055 CDS YP_783421.1 115526510 4362222 complement(5056489..5057703) 1 NC_008435.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; KEGG: rpc:RPC_4451 aminotransferase, class V; class V aminotransferase 5057703 4362222 RPE_4521 Rhodopseudomonas palustris BisA53 class V aminotransferase YP_783421.1 5056489 R 316055 CDS YP_783422.1 115526511 4362223 complement(5057700..5058719) 1 NC_008435.1 PFAM: nitrogen-fixing NifU domain protein; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rpc:RPC_4452 nitrogen-fixing NifU-like; NifU domain-containing protein 5058719 4362223 RPE_4522 Rhodopseudomonas palustris BisA53 NifU domain-containing protein YP_783422.1 5057700 R 316055 CDS YP_783423.1 115526512 4362224 complement(5058739..5059059) 1 NC_008435.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpa:RPA4610 protein of unknown function, HesB/YadR/YfhF; hypothetical protein 5059059 4362224 RPE_4523 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783423.1 5058739 R 316055 CDS YP_783424.1 115526513 4362225 complement(5059215..5059916) 1 NC_008435.1 PFAM: NifQ family protein; KEGG: rpc:RPC_4454 NifQ; nitrogen fixation protein NifQ 5059916 4362225 RPE_4524 Rhodopseudomonas palustris BisA53 nitrogen fixation protein NifQ YP_783424.1 5059215 R 316055 CDS YP_783425.1 115526514 4362226 complement(5059941..5060252) 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpa:RPA4612 ferredoxin 2[4Fe-4S] III, FdxB; 4Fe-4S ferredoxin 5060252 4362226 RPE_4525 Rhodopseudomonas palustris BisA53 4Fe-4S ferredoxin YP_783425.1 5059941 R 316055 CDS YP_783426.1 115526515 4362227 complement(5060311..5060514) 1 NC_008435.1 PFAM: protein of unknown function DUF683; KEGG: rpc:RPC_4456 protein of unknown function DUF683; hypothetical protein 5060514 4362227 RPE_4526 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783426.1 5060311 R 316055 CDS YP_783427.1 115526516 4362228 complement(5060535..5061002) 1 NC_008435.1 PFAM: protein of unknown function DUF269; KEGG: rpc:RPC_4457 protein of unknown function DUF269; hypothetical protein 5061002 4362228 RPE_4527 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783427.1 5060535 R 316055 CDS YP_783428.1 115526517 4362229 complement(5061004..5061405) 1 NC_008435.1 TIGRFAM: nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; KEGG: rpc:RPC_4458 dinitrogenase iron-molybdenum cofactor biosynthesis; dinitrogenase iron-molybdenum cofactor biosynthesis 5061405 4362229 RPE_4528 Rhodopseudomonas palustris BisA53 dinitrogenase iron-molybdenum cofactor biosynthesis YP_783428.1 5061004 R 316055 CDS YP_783429.1 115526518 4362230 complement(5061452..5062825) 1 NC_008435.1 functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifN 5062825 4362230 RPE_4529 Rhodopseudomonas palustris BisA53 nitrogenase molybdenum-cofactor biosynthesis protein NifN YP_783429.1 5061452 R 316055 CDS YP_783430.1 115526519 4362231 complement(5062836..5064500) 1 NC_008435.1 functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifE 5064500 4362231 RPE_4530 Rhodopseudomonas palustris BisA53 nitrogenase molybdenum-cofactor biosynthesis protein NifE YP_783430.1 5062836 R 316055 CDS YP_783431.1 115526520 4362232 complement(5064533..5066089) 1 NC_008435.1 KEGG: rpc:RPC_4461 nitrogenase molybdenum-iron protein beta chain; TIGRFAM: nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase molybdenum-iron protein subunit beta 5066089 4362232 RPE_4531 Rhodopseudomonas palustris BisA53 nitrogenase molybdenum-iron protein subunit beta YP_783431.1 5064533 R 316055 CDS YP_783432.1 115526521 4362233 complement(5066163..5067626) 1 NC_008435.1 KEGG: rpc:RPC_4462 nitrogenase molybdenum-iron protein alpha chain; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1; nitrogenase molybdenum-iron protein subunit alpha 5067626 4362233 RPE_4532 Rhodopseudomonas palustris BisA53 nitrogenase molybdenum-iron protein subunit alpha YP_783432.1 5066163 R 316055 CDS YP_783433.1 115526522 4362234 complement(5067706..5068605) 1 NC_008435.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 5068605 nifH 4362234 nifH Rhodopseudomonas palustris BisA53 nitrogenase reductase YP_783433.1 5067706 R 316055 CDS YP_783434.1 115526523 4362235 complement(5069146..5070048) 1 NC_008435.1 KEGG: rpc:RPC_4464 hypothetical protein; hypothetical protein 5070048 4362235 RPE_4534 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783434.1 5069146 R 316055 CDS YP_783435.1 115526524 4362236 complement(5070141..5070344) 1 NC_008435.1 PFAM: NifT/FixU family protein; KEGG: rpc:RPC_4466 NifT/FixU; NifT/FixU family protein 5070344 4362236 RPE_4535 Rhodopseudomonas palustris BisA53 NifT/FixU family protein YP_783435.1 5070141 R 316055 CDS YP_783436.1 115526525 4362237 complement(5070377..5070607) 1 NC_008435.1 PFAM: NifZ family protein; KEGG: rpc:RPC_4467 NifZ; NifZ family protein 5070607 4362237 RPE_4536 Rhodopseudomonas palustris BisA53 NifZ family protein YP_783436.1 5070377 R 316055 CDS YP_783437.1 115526526 4362238 complement(5070607..5070909) 1 NC_008435.1 PFAM: NifZ family protein; KEGG: rpd:RPD_1068 NifZ; nitrogen fixation protein NifZ 5070909 4362238 RPE_4537 Rhodopseudomonas palustris BisA53 nitrogen fixation protein NifZ YP_783437.1 5070607 R 316055 CDS YP_783438.1 115526527 4362239 complement(5070952..5071491) 1 NC_008435.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rpc:RPC_4469 tetratricopeptide TPR_2; hypothetical protein 5071491 4362239 RPE_4538 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783438.1 5070952 R 316055 CDS YP_783439.1 115526528 4362240 complement(5071494..5071847) 1 NC_008435.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rpc:RPC_4470 HesB/YadR/YfhF; hypothetical protein 5071847 4362240 RPE_4539 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783439.1 5071494 R 316055 CDS YP_783440.1 115526529 4362241 complement(5071859..5072083) 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpc:RPC_4471 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 5072083 4362241 RPE_4540 Rhodopseudomonas palustris BisA53 4Fe-4S ferredoxin YP_783440.1 5071859 R 316055 CDS YP_783441.1 115526530 4362242 complement(5072093..5073649) 1 NC_008435.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; Radical SAM domain protein; KEGG: rpc:RPC_4472 nitrogenase cofactor biosynthesis protein NifB; nitrogenase cofactor biosynthesis protein NifB 5073649 4362242 RPE_4541 Rhodopseudomonas palustris BisA53 nitrogenase cofactor biosynthesis protein NifB YP_783441.1 5072093 R 316055 CDS YP_783442.1 115526531 4362243 complement(5074065..5074259) 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: rpc:RPC_4473 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin 5074259 4362243 RPE_4542 Rhodopseudomonas palustris BisA53 4Fe-4S ferredoxin YP_783442.1 5074065 R 316055 CDS YP_783443.1 115526532 4362244 complement(5074487..5076217) 1 NC_008435.1 KEGG: rpc:RPC_4475 transcriptional regulator, NifA, fis family; TIGRFAM: Nif-specific regulatory protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; transcriptional regulator NifA 5076217 4362244 RPE_4543 Rhodopseudomonas palustris BisA53 transcriptional regulator NifA YP_783443.1 5074487 R 316055 CDS YP_783444.1 115526533 4362245 complement(5076482..5077402) 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_4476 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5077402 4362245 RPE_4544 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_783444.1 5076482 R 316055 CDS YP_783445.1 115526534 4362246 5077703..5078494 1 NC_008435.1 KEGG: rpc:RPC_4477 hypothetical protein; hypothetical protein 5078494 4362246 RPE_4545 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783445.1 5077703 D 316055 CDS YP_783446.1 115526535 4362247 5078686..5080350 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll3856 probable medium-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 5080350 4362247 RPE_4546 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_783446.1 5078686 D 316055 CDS YP_783447.1 115526536 4362248 complement(5080756..5080935) 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpc:RPC_1239 antenna complex, alpha/beta subunit; antenna complex subunit alpha/beta 5080935 4362248 RPE_4547 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_783447.1 5080756 R 316055 CDS YP_783448.1 115526537 4362249 complement(5080958..5081101) 1 NC_008435.1 PFAM: antenna complex, alpha/beta subunit; KEGG: rpa:RPA2654 light harvesting protein B-800-850, beta chain A (antenna pigment protein, beta chain A) (LH II-A beta); antenna complex subunit alpha/beta 5081101 4362249 RPE_4548 Rhodopseudomonas palustris BisA53 antenna complex subunit alpha/beta YP_783448.1 5080958 R 316055 CDS YP_783449.1 115526538 4362250 5081532..5083520 1 NC_008435.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; histidine kinase, HAMP region domain protein; KEGG: rpa:RPA1965 putative adenylate/guanylate cyclase; adenylate/guanylate cyclase 5083520 4362250 RPE_4549 Rhodopseudomonas palustris BisA53 adenylate/guanylate cyclase YP_783449.1 5081532 D 316055 CDS YP_783450.1 115526539 4362251 complement(5083566..5084042) 1 NC_008435.1 KEGG: rpc:RPC_4526 hypothetical protein; hypothetical protein 5084042 4362251 RPE_4550 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783450.1 5083566 R 316055 CDS YP_783451.1 115526540 4362252 5084172..5085635 1 NC_008435.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rpc:RPC_4525 major facilitator superfamily MFS_1; major facilitator transporter 5085635 4362252 RPE_4551 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_783451.1 5084172 D 316055 CDS YP_783452.1 115526541 4362253 5085641..5086438 1 NC_008435.1 KEGG: rpc:RPC_4524 HAD-superfamily hydrolase subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; HAD family hydrolase 5086438 4362253 RPE_4552 Rhodopseudomonas palustris BisA53 HAD family hydrolase YP_783452.1 5085641 D 316055 CDS YP_783453.1 115526542 4362254 5086659..5088176 1 NC_008435.1 KEGG: rpc:RPC_4523 alpha,alpha-trehalose-phosphate synthase; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase, family 20; Alpha,alpha-trehalose-phosphate synthase 5088176 4362254 RPE_4553 Rhodopseudomonas palustris BisA53 Alpha,alpha-trehalose-phosphate synthase YP_783453.1 5086659 D 316055 CDS YP_783454.1 115526543 4362256 complement(5089625..5101903) 1 NC_008435.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: bur:Bcep18194_B1068 haemagglutinin-like; filamentous hemagglutinin outer membrane protein 5101903 4362256 RPE_4554 Rhodopseudomonas palustris BisA53 filamentous hemagglutinin outer membrane protein YP_783454.1 5089625 R 316055 CDS YP_783455.1 115526544 4362257 complement(5101982..5102983) 1 NC_008435.1 PFAM: FecR protein; KEGG: rpb:RPB_2206 putative FecR; putative FecR protein 5102983 4362257 RPE_4555 Rhodopseudomonas palustris BisA53 putative FecR protein YP_783455.1 5101982 R 316055 CDS YP_783456.1 115526545 4362258 complement(5103114..5103629) 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpb:RPB_2205 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 factor 5103629 4362258 RPE_4556 Rhodopseudomonas palustris BisA53 ECF subfamily RNA polymerase sigma-24 factor YP_783456.1 5103114 R 316055 CDS YP_783457.1 115526546 4362259 complement(5103626..5104363) 1 NC_008435.1 PFAM: Secretin/TonB, short N-terminal domain; KEGG: rpb:RPB_2211 hypothetical protein; secretin/TonB short N-terminal domain-containing protein 5104363 4362259 RPE_4557 Rhodopseudomonas palustris BisA53 secretin/TonB short N-terminal domain-containing protein YP_783457.1 5103626 R 316055 CDS YP_783458.1 115526547 4362260 complement(5104564..5105160) 1 NC_008435.1 KEGG: cch:Cag_0831 regulatory proteins, AsnC family; hypothetical protein 5105160 4362260 RPE_4558 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783458.1 5104564 R 316055 CDS YP_783459.1 115526548 4362261 complement(5105330..5105821) 1 NC_008435.1 PFAM: cytochrome B561; KEGG: rpb:RPB_2376 cytochrome b561; cytochrome B561 5105821 4362261 RPE_4559 Rhodopseudomonas palustris BisA53 cytochrome B561 YP_783459.1 5105330 R 316055 CDS YP_783460.1 115526549 4362262 complement(5105888..5106343) 1 NC_008435.1 PFAM: Calcium-binding EF-hand-containing protein; KEGG: rpb:RPB_2375 calcium-binding EF-hand protein; calcium-binding EF-hand-containing protein 5106343 4362262 RPE_4560 Rhodopseudomonas palustris BisA53 calcium-binding EF-hand-containing protein YP_783460.1 5105888 R 316055 CDS YP_783461.1 115526550 4362263 5106515..5107252 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpb:RPB_2374 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5107252 4362263 RPE_4561 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_783461.1 5106515 D 316055 CDS YP_783462.1 115526551 4362264 5107249..5108616 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpb:RPB_2373 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 5108616 4362264 RPE_4562 Rhodopseudomonas palustris BisA53 periplasmic sensor signal transduction histidine kinase YP_783462.1 5107249 D 316055 CDS YP_783463.1 115526552 4362265 complement(5108629..5109684) 1 NC_008435.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: mlo:mll2462 hypothetical protein; hypothetical protein 5109684 4362265 RPE_4563 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783463.1 5108629 R 316055 CDS YP_783464.1 115526553 4362266 5109741..5110028 1 NC_008435.1 hypothetical protein 5110028 4362266 RPE_4564 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783464.1 5109741 D 316055 CDS YP_783465.1 115526554 4362267 5110081..5110350 1 NC_008435.1 KEGG: rpb:RPB_1336 hypothetical protein; hypothetical protein 5110350 4362267 RPE_4565 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783465.1 5110081 D 316055 CDS YP_783466.1 115526555 4362268 complement(5110901..5111176) 1 NC_008435.1 hypothetical protein 5111176 4362268 RPE_4566 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783466.1 5110901 R 316055 CDS YP_783467.1 115526556 4362269 complement(5111728..5113773) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4527 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5113773 4362269 RPE_4567 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783467.1 5111728 R 316055 CDS YP_783468.1 115526557 4362270 5114086..5114556 1 NC_008435.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rpc:RPC_4528 (2Fe-2S)-binding; 2Fe-2S iron-sulfur cluster binding domain-containing protein 5114556 4362270 RPE_4568 Rhodopseudomonas palustris BisA53 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_783468.1 5114086 D 316055 CDS YP_783469.1 115526558 4362271 5114703..5117057 1 NC_008435.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rpc:RPC_4529 carbon-monoxide dehydrogenase; carbon-monoxide dehydrogenase 5117057 4362271 RPE_4569 Rhodopseudomonas palustris BisA53 carbon-monoxide dehydrogenase YP_783469.1 5114703 D 316055 CDS YP_783470.1 115526559 4362272 5117133..5117933 1 NC_008435.1 PFAM: molybdopterin dehydrogenase, FAD-binding; KEGG: rpc:RPC_4530 carbon-monoxide dehydrogenase; carbon-monoxide dehydrogenase 5117933 4362272 RPE_4570 Rhodopseudomonas palustris BisA53 carbon-monoxide dehydrogenase YP_783470.1 5117133 D 316055 CDS YP_783471.1 115526560 4362273 complement(5118288..5119388) 1 NC_008435.1 PFAM: chemotaxis sensory transducer; KEGG: bja:bll4376 hypothetical protein; methyl-accepting chemotaxis sensory transducer 5119388 4362273 RPE_4571 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783471.1 5118288 R 316055 CDS YP_783472.1 115526561 4362274 5120081..5120509 1 NC_008435.1 KEGG: rpc:RPC_4537 hypothetical protein; hypothetical protein 5120509 4362274 RPE_4572 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783472.1 5120081 D 316055 CDS YP_783473.1 115526562 4362275 5120689..5121384 1 NC_008435.1 PFAM: PepSY-associated TM helix domain protein; KEGG: nwi:Nwi_2813 PepSY-associated TM helix; PepSY-associated TM helix domain-containing protein 5121384 4362275 RPE_4573 Rhodopseudomonas palustris BisA53 PepSY-associated TM helix domain-containing protein YP_783473.1 5120689 D 316055 CDS YP_783474.1 115526563 4362276 5121395..5121907 1 NC_008435.1 KEGG: nha:Nham_3634 hypothetical protein; hypothetical protein 5121907 4362276 RPE_4574 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783474.1 5121395 D 316055 CDS YP_783475.1 115526564 4362277 5121951..5122760 1 NC_008435.1 KEGG: nha:Nham_3635 hypothetical protein; hypothetical protein 5122760 4362277 RPE_4575 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783475.1 5121951 D 316055 CDS YP_783476.1 115526565 4362278 5122845..5123783 1 NC_008435.1 PFAM: ApbE family lipoprotein; KEGG: nha:Nham_3636 ApbE-like lipoprotein; ApbE family lipoprotein 5123783 4362278 RPE_4576 Rhodopseudomonas palustris BisA53 ApbE family lipoprotein YP_783476.1 5122845 D 316055 CDS YP_783477.1 115526566 4362279 complement(5123959..5124645) 1 NC_008435.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: nha:Nham_3637 2OG-Fe(II) oxygenase; putative hydroxylase 5124645 4362279 RPE_4577 Rhodopseudomonas palustris BisA53 putative hydroxylase YP_783477.1 5123959 R 316055 CDS YP_783478.1 115526567 4362280 complement(5124870..5127017) 1 NC_008435.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: nha:Nham_3638 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 5127017 4362280 RPE_4578 Rhodopseudomonas palustris BisA53 TonB-dependent siderophore receptor YP_783478.1 5124870 R 316055 CDS YP_783479.1 115526568 4362281 5127738..5128646 1 NC_008435.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpc:RPC_4540 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 5128646 4362281 RPE_4579 Rhodopseudomonas palustris BisA53 MotA/TolQ/ExbB proton channel YP_783479.1 5127738 D 316055 CDS YP_783480.1 115526569 4362282 5128659..5129090 1 NC_008435.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpc:RPC_4541 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 5129090 4362282 RPE_4580 Rhodopseudomonas palustris BisA53 biopolymer transport protein ExbD/TolR YP_783480.1 5128659 D 316055 CDS YP_783481.1 115526570 4362283 5129087..5129884 1 NC_008435.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: rpc:RPC_4542 TonB-like; TonB family protein 5129884 4362283 RPE_4581 Rhodopseudomonas palustris BisA53 TonB family protein YP_783481.1 5129087 D 316055 CDS YP_783482.1 115526571 4362284 5129976..5132417 1 NC_008435.1 PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: nha:Nham_3642 SecA DEAD-like; SecA DEAD domain-containing protein 5132417 4362284 RPE_4582 Rhodopseudomonas palustris BisA53 SecA DEAD domain-containing protein YP_783482.1 5129976 D 316055 CDS YP_783483.1 115526572 4362285 5132486..5133130 1 NC_008435.1 KEGG: rpc:RPC_4544 hypothetical protein; hypothetical protein 5133130 4362285 RPE_4583 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783483.1 5132486 D 316055 CDS YP_783484.1 115526573 4362286 5133278..5134390 1 NC_008435.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bxe:Bxe_A2257 small-conductance mechanosensitive ion channel; mechanosensitive ion channel MscS 5134390 4362286 RPE_4584 Rhodopseudomonas palustris BisA53 mechanosensitive ion channel MscS YP_783484.1 5133278 D 316055 CDS YP_783485.1 115526574 4362287 complement(5134408..5135460) 1 NC_008435.1 KEGG: ana:alr0276 hypothetical protein; hypothetical protein 5135460 4362287 RPE_4585 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783485.1 5134408 R 316055 CDS YP_783486.1 115526575 4362288 5135484..5137091 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpd:RPD_3984 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 5137091 4362288 RPE_4586 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_783486.1 5135484 D 316055 CDS YP_783487.1 115526576 4362289 5137395..5138243 1 NC_008435.1 KEGG: rpc:RPC_0963 hypothetical protein; hypothetical protein 5138243 4362289 RPE_4587 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783487.1 5137395 D 316055 CDS YP_783488.1 115526577 4362290 complement(5138366..5139700) 1 NC_008435.1 PFAM: transposase, IS4 family protein; KEGG: sth:STH2086 transposase; transposase, IS4 family protein 5139700 4362290 RPE_4588 Rhodopseudomonas palustris BisA53 transposase, IS4 family protein YP_783488.1 5138366 R 316055 CDS YP_783489.1 115526578 4362291 complement(5139936..5141021) 1 NC_008435.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 5141021 4362291 RPE_4589 Rhodopseudomonas palustris BisA53 chorismate synthase YP_783489.1 5139936 R 316055 CDS YP_783490.1 115526579 4362292 complement(5141080..5141685) 1 NC_008435.1 PFAM: Phosphoglycerate mutase; KEGG: rpd:RPD_1313 phosphoglycerate mutase; phosphoglycerate mutase 5141685 4362292 RPE_4590 Rhodopseudomonas palustris BisA53 phosphoglycerate mutase YP_783490.1 5141080 R 316055 CDS YP_783491.1 115526580 4362293 complement(5141889..5142707) 1 NC_008435.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 5142707 4362293 RPE_4591 Rhodopseudomonas palustris BisA53 enoyl-(acyl carrier protein) reductase YP_783491.1 5141889 R 316055 CDS YP_783492.1 115526581 4362294 complement(5143337..5144305) 1 NC_008435.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rpc:RPC_1138 chaperone DnaJ-like; chaperone DnaJ domain-containing protein 5144305 4362294 RPE_4592 Rhodopseudomonas palustris BisA53 chaperone DnaJ domain-containing protein YP_783492.1 5143337 R 316055 CDS YP_783493.1 115526582 4362295 complement(5144417..5144923) 1 NC_008435.1 KEGG: rpc:RPC_1137 hypothetical protein; hypothetical protein 5144923 4362295 RPE_4593 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783493.1 5144417 R 316055 CDS YP_783494.1 115526583 4362296 5144939..5145580 1 NC_008435.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 5145580 4362296 RPE_4594 Rhodopseudomonas palustris BisA53 pyridoxamine 5'-phosphate oxidase YP_783494.1 5144939 D 316055 CDS YP_783495.1 115526584 4362297 5145577..5146353 1 NC_008435.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rpa:RPA1195 short-chain dehydrogenase; short-chain dehydrogenase/reductase SDR 5146353 4362297 RPE_4595 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_783495.1 5145577 D 316055 CDS YP_783496.1 115526585 4362298 complement(5146499..5146843) 1 NC_008435.1 TIGRFAM: putative regulatory protein, FmdB family; KEGG: rpa:RPA1256 putative formamidase regulatory protein FmdB; FmdB family regulatory protein 5146843 4362298 RPE_4596 Rhodopseudomonas palustris BisA53 FmdB family regulatory protein YP_783496.1 5146499 R 316055 CDS YP_783497.1 115526586 4362299 complement(5147076..5148305) 1 NC_008435.1 PFAM: Acetamidase/Formamidase; KEGG: rpd:RPD_3859 formamidase; formamidase 5148305 4362299 RPE_4597 Rhodopseudomonas palustris BisA53 formamidase YP_783497.1 5147076 R 316055 CDS YP_783498.1 115526587 4362300 complement(5148337..5149026) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1256 ABC transporter related; ABC transporter-like protein 5149026 4362300 RPE_4598 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783498.1 5148337 R 316055 CDS YP_783499.1 115526588 4362301 complement(5149225..5149980) 1 NC_008435.1 PFAM: ABC transporter related; KEGG: rpd:RPD_3861 ABC transporter related; ABC transporter-like protein 5149980 4362301 RPE_4599 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783499.1 5149225 R 316055 CDS YP_783500.1 115526589 4362302 complement(5149991..5151145) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpd:RPD_3862 inner-membrane translocator; inner-membrane translocator 5151145 4362302 RPE_4600 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_783500.1 5149991 R 316055 CDS YP_783501.1 115526590 4362303 complement(5151162..5152088) 1 NC_008435.1 PFAM: inner-membrane translocator; KEGG: rpb:RPB_1253 inner-membrane translocator; inner-membrane translocator 5152088 4362303 RPE_4601 Rhodopseudomonas palustris BisA53 inner-membrane translocator YP_783501.1 5151162 R 316055 CDS YP_783502.1 115526591 4362304 complement(5152263..5153525) 1 NC_008435.1 KEGG: rpd:RPD_3864 amide-UreA binding protein; amide-UreA binding protein 5153525 4362304 RPE_4602 Rhodopseudomonas palustris BisA53 amide-UreA binding protein YP_783502.1 5152263 R 316055 CDS YP_783503.1 115526592 4362305 5153674..5157045 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpb:RPB_1251 multi-sensor hybrid histidine kinase; periplasmic sensor hybrid histidine kinase 5157045 4362305 RPE_4603 Rhodopseudomonas palustris BisA53 periplasmic sensor hybrid histidine kinase YP_783503.1 5153674 D 316055 CDS YP_783504.1 115526593 4362306 5157035..5157964 1 NC_008435.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: rpd:RPD_3866 response regulator receiver; two component LuxR family transcriptional regulator 5157964 4362306 RPE_4604 Rhodopseudomonas palustris BisA53 two component LuxR family transcriptional regulator YP_783504.1 5157035 D 316055 CDS YP_783505.1 115526594 4362307 complement(5158333..5159106) 1 NC_008435.1 KEGG: rpc:RPC_4598 hypothetical protein; hypothetical protein 5159106 4362307 RPE_4605 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783505.1 5158333 R 316055 CDS YP_783506.1 115526595 4362308 complement(5159103..5159459) 1 NC_008435.1 PFAM: protein of unknown function DUF1469; KEGG: rpc:RPC_4599 protein of unknown function DUF1469; hypothetical protein 5159459 4362308 RPE_4606 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783506.1 5159103 R 316055 CDS YP_783507.1 115526596 4362309 complement(5159464..5160078) 1 NC_008435.1 KEGG: rpc:RPC_4600 late embryogenesis abundant protein; hypothetical protein 5160078 4362309 RPE_4607 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783507.1 5159464 R 316055 CDS YP_783508.1 115526597 4362310 complement(5160091..5161329) 1 NC_008435.1 PFAM: Late embryogenesis abundant protein; KEGG: rpc:RPC_4601 hypothetical protein; late embryogenesis abundant protein 5161329 4362310 RPE_4608 Rhodopseudomonas palustris BisA53 late embryogenesis abundant protein YP_783508.1 5160091 R 316055 CDS YP_783509.1 115526598 4362311 5161508..5163019 1 NC_008435.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_1244 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 5163019 4362311 RPE_4609 Rhodopseudomonas palustris BisA53 AMP-dependent synthetase and ligase YP_783509.1 5161508 D 316055 CDS YP_783510.1 115526599 4362312 5163213..5163533 1 NC_008435.1 hypothetical protein 5163533 4362312 RPE_4610 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783510.1 5163213 D 316055 CDS YP_783511.1 115526600 4362313 complement(5163526..5164281) 1 NC_008435.1 KEGG: nha:Nham_2537 transcriptional regulator-related protein; CRP/FNR family transcriptional regulator 5164281 4362313 RPE_4611 Rhodopseudomonas palustris BisA53 CRP/FNR family transcriptional regulator YP_783511.1 5163526 R 316055 CDS YP_783512.1 115526601 4362314 complement(5165373..5166656) 1 NC_008435.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 5166656 4362314 RPE_4612 Rhodopseudomonas palustris BisA53 phosphoribosylamine--glycine ligase YP_783512.1 5165373 R 316055 CDS YP_783513.1 115526602 4362315 5166829..5167323 1 NC_008435.1 KEGG: rpc:RPC_4620 hypothetical protein; hypothetical protein 5167323 4362315 RPE_4613 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783513.1 5166829 D 316055 CDS YP_783514.1 115526603 4362316 complement(5167326..5167655) 1 NC_008435.1 KEGG: bja:bsl7504 hypothetical protein; hypothetical protein 5167655 4362316 RPE_4614 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783514.1 5167326 R 316055 CDS YP_783515.1 115526604 4362317 complement(5167637..5168194) 1 NC_008435.1 KEGG: rpb:RPB_1861 hypothetical protein; hypothetical protein 5168194 4362317 RPE_4615 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783515.1 5167637 R 316055 CDS YP_783516.1 115526605 4362318 complement(5168191..5169186) 1 NC_008435.1 KEGG: rpb:RPB_1860 alpha/beta hydrolase; alpha/beta hydrolase 5169186 4362318 RPE_4616 Rhodopseudomonas palustris BisA53 alpha/beta hydrolase YP_783516.1 5168191 R 316055 CDS YP_783517.1 115526606 4362319 5169323..5170963 1 NC_008435.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 5170963 xseA 4362319 xseA Rhodopseudomonas palustris BisA53 exodeoxyribonuclease VII large subunit YP_783517.1 5169323 D 316055 CDS YP_783518.1 115526607 4362320 complement(5171281..5172249) 1 NC_008435.1 KEGG: rpc:RPC_4623 glucokinase; TIGRFAM: glucokinase; PFAM: Glucokinase; glucokinase 5172249 4362320 RPE_4618 Rhodopseudomonas palustris BisA53 glucokinase YP_783518.1 5171281 R 316055 CDS YP_783519.1 115526608 4362321 complement(5172246..5173610) 1 NC_008435.1 PFAM: glycoside hydrolase, family 1; KEGG: bja:blr4657 beta-glucosidase; Beta-glucosidase 5173610 4362321 RPE_4619 Rhodopseudomonas palustris BisA53 Beta-glucosidase YP_783519.1 5172246 R 316055 CDS YP_783520.1 115526609 4362322 5173741..5175087 1 NC_008435.1 KEGG: rpc:RPC_4624 hypothetical protein; agarase 5175087 4362322 RPE_4620 Rhodopseudomonas palustris BisA53 agarase YP_783520.1 5173741 D 316055 CDS YP_783521.1 115526610 4362323 complement(5175084..5175275) 1 NC_008435.1 KEGG: rpc:RPC_4626 hypothetical protein; hypothetical protein 5175275 4362323 RPE_4621 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783521.1 5175084 R 316055 CDS YP_783522.1 115526611 4362324 complement(5175893..5177227) 1 NC_008435.1 PFAM: beta-lactamase; KEGG: rpd:RPD_0869 6-aminohexanoate-dimer hydrolase; 6-aminohexanoate-dimer hydrolase 5177227 4362324 RPE_4622 Rhodopseudomonas palustris BisA53 6-aminohexanoate-dimer hydrolase YP_783522.1 5175893 R 316055 CDS YP_783523.1 115526612 4362325 5177419..5177823 1 NC_008435.1 PFAM: protein of unknown function DUF307; KEGG: rpc:RPC_4633 protein of unknown function DUF307; hypothetical protein 5177823 4362325 RPE_4623 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783523.1 5177419 D 316055 CDS YP_783524.1 115526613 4362326 5178276..5179979 1 NC_008435.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 5179979 4362326 RPE_4624 Rhodopseudomonas palustris BisA53 potassium-transporting ATPase subunit A YP_783524.1 5178276 D 316055 CDS YP_783525.1 115526614 4362327 5179997..5182072 1 NC_008435.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 5182072 4362327 RPE_4625 Rhodopseudomonas palustris BisA53 potassium-transporting ATPase subunit B YP_783525.1 5179997 D 316055 CDS YP_783526.1 115526615 4362328 5182085..5182687 1 NC_008435.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 5182687 4362328 RPE_4626 Rhodopseudomonas palustris BisA53 potassium-transporting ATPase subunit C YP_783526.1 5182085 D 316055 CDS YP_783527.1 115526616 4362329 5182704..5185394 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Osmosensitive K+ channel His kinase sensor; UspA domain protein; KEGG: rpb:RPB_4648 osmosensitive K+ channel signal transduction histidine kinase; osmosensitive K+ channel signal transduction histidine kinase 5185394 4362329 RPE_4627 Rhodopseudomonas palustris BisA53 osmosensitive K+ channel signal transduction histidine kinase YP_783527.1 5182704 D 316055 CDS YP_783528.1 115526617 4362330 5185391..5186083 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpb:RPB_4649 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5186083 4362330 RPE_4628 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_783528.1 5185391 D 316055 CDS YP_783529.1 115526618 4362331 5186252..5186956 1 NC_008435.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein, Crp; KEGG: bja:bll6060 putative catabolite gene activator; Crp/FNR family transcriptional regulator 5186956 4362331 RPE_4629 Rhodopseudomonas palustris BisA53 Crp/FNR family transcriptional regulator YP_783529.1 5186252 D 316055 CDS YP_783530.1 115526619 4362332 5187670..5190693 1 NC_008435.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: bja:bll5043 hypothetical protein; adenylate/guanylate cyclase 5190693 4362332 RPE_4630 Rhodopseudomonas palustris BisA53 adenylate/guanylate cyclase YP_783530.1 5187670 D 316055 CDS YP_783531.1 115526620 4362333 5190690..5191970 1 NC_008435.1 KEGG: bja:bll5042 hypothetical protein; hypothetical protein 5191970 4362333 RPE_4631 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783531.1 5190690 D 316055 CDS YP_783532.1 115526621 4362334 5191984..5193768 1 NC_008435.1 KEGG: bja:bll5041 hypothetical protein; hypothetical protein 5193768 4362334 RPE_4632 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783532.1 5191984 D 316055 CDS YP_783533.1 115526622 4362335 5193765..5195225 1 NC_008435.1 KEGG: bja:bll5040 putative iron-dependent peroxidase; putative iron-dependent peroxidase 5195225 4362335 RPE_4633 Rhodopseudomonas palustris BisA53 putative iron-dependent peroxidase YP_783533.1 5193765 D 316055 CDS YP_783534.1 115526623 4362336 complement(5195236..5195907) 1 NC_008435.1 PFAM: Hly-III family protein; KEGG: rpa:RPA1585 putative hemmolysin III, HlyIII family; Hly-III family protein 5195907 4362336 RPE_4634 Rhodopseudomonas palustris BisA53 Hly-III family protein YP_783534.1 5195236 R 316055 CDS YP_783535.1 115526624 4362337 complement(5196239..5196727) 1 NC_008435.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 5196727 4362337 RPE_4635 Rhodopseudomonas palustris BisA53 cyanate hydratase YP_783535.1 5196239 R 316055 CDS YP_783536.1 115526625 4362338 complement(5196805..5197725) 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_2056 ABC transporter related; ABC transporter-like protein 5197725 4362338 RPE_4636 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783536.1 5196805 R 316055 CDS YP_783537.1 115526626 4362339 complement(5197731..5198570) 1 NC_008435.1 TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_2055 nitrate transport permease; nitrate ABC transporter inner membrane subunit 5198570 4362339 RPE_4637 Rhodopseudomonas palustris BisA53 nitrate ABC transporter inner membrane subunit YP_783537.1 5197731 R 316055 CDS YP_783538.1 115526627 4362340 complement(5198731..5200119) 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; KEGG: rpb:RPB_2054 twin-arginine translocation pathway signal; ABC-type nitrate transport system periplasmic component 5200119 4362340 RPE_4638 Rhodopseudomonas palustris BisA53 ABC-type nitrate transport system periplasmic component YP_783538.1 5198731 R 316055 CDS YP_783539.1 115526628 4362341 5200275..5202212 1 NC_008435.1 KEGG: rpb:RPB_2053 transcriptional regulator, fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase; Fis family transcriptional regulator 5202212 4362341 RPE_4639 Rhodopseudomonas palustris BisA53 Fis family transcriptional regulator YP_783539.1 5200275 D 316055 CDS YP_783540.1 115526629 4362343 complement(5202546..5206085) 1 NC_008435.1 KEGG: sil:SPOA0203 hypothetical protein; hypothetical protein 5206085 4362343 RPE_4640 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783540.1 5202546 R 316055 CDS YP_783541.1 115526630 4362344 complement(5206082..5208013) 1 NC_008435.1 hypothetical protein 5208013 4362344 RPE_4641 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783541.1 5206082 R 316055 CDS YP_783542.1 115526631 4362345 complement(5208020..5210830) 1 NC_008435.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: sil:SPOA0205 serine protease, subtilase family; peptidase S8/S53 subtilisin kexin sedolisin 5210830 4362345 RPE_4642 Rhodopseudomonas palustris BisA53 peptidase S8/S53 subtilisin kexin sedolisin YP_783542.1 5208020 R 316055 CDS YP_783543.1 115526632 4362346 5211291..5214179 1 NC_008435.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; phospholipase D/Transphosphatidylase; KEGG: rpc:RPC_3413 hypothetical protein; phospholipase D/transphosphatidylase 5214179 4362346 RPE_4643 Rhodopseudomonas palustris BisA53 phospholipase D/transphosphatidylase YP_783543.1 5211291 D 316055 CDS YP_783544.1 115526633 4362347 complement(5214605..5216260) 1 NC_008435.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpa:RPA0737 putative oxalate/formate major facilitator superfamily (MFS) antiporter; major facilitator transporter 5216260 4362347 RPE_4644 Rhodopseudomonas palustris BisA53 major facilitator transporter YP_783544.1 5214605 R 316055 CDS YP_783545.1 115526634 4362348 complement(5216318..5216536) 1 NC_008435.1 KEGG: rpd:RPD_0621 putative NAD-dependent formate dehydrogenase delta subunit; putative NAD-dependent formate dehydrogenase subunit delta 5216536 4362348 RPE_4645 Rhodopseudomonas palustris BisA53 putative NAD-dependent formate dehydrogenase subunit delta YP_783545.1 5216318 R 316055 CDS YP_783546.1 115526635 4362349 complement(5216526..5217344) 1 NC_008435.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 5217344 4362349 RPE_4646 Rhodopseudomonas palustris BisA53 formate dehydrogenase accessory protein YP_783546.1 5216526 R 316055 CDS YP_783547.1 115526636 4362350 complement(5217349..5220195) 1 NC_008435.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rpc:RPC_4645 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 5220195 4362350 RPE_4647 Rhodopseudomonas palustris BisA53 formate dehydrogenase subunit alpha YP_783547.1 5217349 R 316055 CDS YP_783548.1 115526637 4362351 complement(5220208..5221764) 1 NC_008435.1 PFAM: Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit; KEGG: rpc:RPC_4646 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 5221764 4362351 RPE_4648 Rhodopseudomonas palustris BisA53 NADH dehydrogenase (quinone) YP_783548.1 5220208 R 316055 CDS YP_783549.1 115526638 4362352 complement(5221761..5222243) 1 NC_008435.1 catalyzes the oxidation of formate to carbon dioxide and hydrogen using NAD or NADP as the acceptor; formate dehydrogenase subunit gamma 5222243 4362352 RPE_4649 Rhodopseudomonas palustris BisA53 formate dehydrogenase subunit gamma YP_783549.1 5221761 R 316055 CDS YP_783550.1 115526639 4362353 complement(5222365..5223255) 1 NC_008435.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rpc:RPC_4648 transcriptional regulator, LysR family; LysR family transcriptional regulator 5223255 4362353 RPE_4650 Rhodopseudomonas palustris BisA53 LysR family transcriptional regulator YP_783550.1 5222365 R 316055 CDS YP_783551.1 115526640 4362354 complement(5223523..5226744) 1 NC_008435.1 PFAM: acriflavin resistance protein; KEGG: rpb:RPB_4300 acriflavin resistance protein; acriflavin resistance protein 5226744 4362354 RPE_4651 Rhodopseudomonas palustris BisA53 acriflavin resistance protein YP_783551.1 5223523 R 316055 CDS YP_783552.1 115526641 4362355 complement(5226741..5228111) 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: bja:bll5772 hypothetical protein; RND family efflux transporter MFP subunit 5228111 4362355 RPE_4652 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_783552.1 5226741 R 316055 CDS YP_783553.1 115526642 4362356 5228142..5228345 1 NC_008435.1 KEGG: rpd:RPD_4202 hypothetical protein; hypothetical protein 5228345 4362356 RPE_4653 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783553.1 5228142 D 316055 CDS YP_783554.1 115526643 4362357 complement(5228510..5229502) 1 NC_008435.1 PFAM: CHAD domain containing protein; KEGG: rpc:RPC_4651 CHAD; CHAD domain-containing protein 5229502 4362357 RPE_4654 Rhodopseudomonas palustris BisA53 CHAD domain-containing protein YP_783554.1 5228510 R 316055 CDS YP_783555.1 115526644 4362358 complement(5229752..5231083) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4653 periplasmic sensor signal transduction histidine kinase; sensor signal transduction histidine kinase 5231083 4362358 RPE_4655 Rhodopseudomonas palustris BisA53 sensor signal transduction histidine kinase YP_783555.1 5229752 R 316055 CDS YP_783556.1 115526645 4362359 complement(5231080..5231856) 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4654 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5231856 4362359 RPE_4656 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_783556.1 5231080 R 316055 CDS YP_783557.1 115526646 4362360 complement(5232030..5232671) 1 NC_008435.1 PFAM: cytochrome B561; KEGG: rpc:RPC_4656 cytochrome b561; cytochrome B561 5232671 4362360 RPE_4657 Rhodopseudomonas palustris BisA53 cytochrome B561 YP_783557.1 5232030 R 316055 CDS YP_783558.1 115526647 4362361 complement(5232768..5235914) 1 NC_008435.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rpc:RPC_4657 heavy metal efflux pump CzcA; CzcA family heavy metal efflux protein 5235914 4362361 RPE_4658 Rhodopseudomonas palustris BisA53 CzcA family heavy metal efflux protein YP_783558.1 5232768 R 316055 CDS YP_783559.1 115526648 4362362 complement(5235911..5237326) 1 NC_008435.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: rpc:RPC_4658 secretion protein HlyD; RND family efflux transporter MFP subunit 5237326 4362362 RPE_4659 Rhodopseudomonas palustris BisA53 RND family efflux transporter MFP subunit YP_783559.1 5235911 R 316055 CDS YP_783560.1 115526649 4362363 complement(5237323..5237724) 1 NC_008435.1 KEGG: rpc:RPC_4659 hypothetical protein; hypothetical protein 5237724 4362363 RPE_4660 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783560.1 5237323 R 316055 CDS YP_783561.1 115526650 4362364 complement(5237810..5238370) 1 NC_008435.1 KEGG: rpb:RPB_1100 hypothetical protein; hypothetical protein 5238370 4362364 RPE_4661 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783561.1 5237810 R 316055 CDS YP_783562.1 115526651 4362365 complement(5238416..5239741) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4661 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5239741 4362365 RPE_4662 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783562.1 5238416 R 316055 CDS YP_783563.1 115526652 4362366 complement(5239716..5240237) 1 NC_008435.1 KEGG: rpc:RPC_4662 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 5240237 4362366 RPE_4663 Rhodopseudomonas palustris BisA53 putative PAS/PAC sensor protein YP_783563.1 5239716 R 316055 CDS YP_783564.1 115526653 4362367 complement(5240443..5241561) 1 NC_008435.1 PFAM: ABC-2 type transporter; KEGG: rpc:RPC_4663 ABC-2; ABC-2 type transporter 5241561 4362367 RPE_4664 Rhodopseudomonas palustris BisA53 ABC-2 type transporter YP_783564.1 5240443 R 316055 CDS YP_783565.1 115526654 4362368 complement(5241558..5244332) 1 NC_008435.1 PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: rpc:RPC_4664 ABC transporter related; ABC transporter-like protein 5244332 4362368 RPE_4665 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783565.1 5241558 R 316055 CDS YP_783566.1 115526655 4362369 complement(5244371..5245441) 1 NC_008435.1 PFAM: secretion protein HlyD family protein; KEGG: rpc:RPC_4665 secretion protein HlyD; secretion protein HlyD family protein 5245441 4362369 RPE_4666 Rhodopseudomonas palustris BisA53 secretion protein HlyD family protein YP_783566.1 5244371 R 316055 CDS YP_783567.1 115526656 4362370 5245620..5246207 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_4666 transcriptional regulator, TetR family; TetR family transcriptional regulator 5246207 4362370 RPE_4667 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_783567.1 5245620 D 316055 CDS YP_783568.1 115526657 4362371 complement(5246227..5247957) 1 NC_008435.1 KEGG: rpc:RPC_4667 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5247957 4362371 RPE_4668 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783568.1 5246227 R 316055 CDS YP_783569.1 115526658 4362372 complement(5247963..5249054) 1 NC_008435.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: rpc:RPC_4668 response regulator receiver (CheY-like) modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase 5249054 4362372 RPE_4669 Rhodopseudomonas palustris BisA53 response regulator receiver modulated CheB methylesterase YP_783569.1 5247963 R 316055 CDS YP_783570.1 115526659 4362373 complement(5249072..5249923) 1 NC_008435.1 PFAM: MCP methyltransferase, CheR-type; KEGG: rpc:RPC_4669 MCP methyltransferase, CheR-type; chemotaxis protein CheR 5249923 4362373 RPE_4670 Rhodopseudomonas palustris BisA53 chemotaxis protein CheR YP_783570.1 5249072 R 316055 CDS YP_783571.1 115526660 4362374 complement(5249928..5250410) 1 NC_008435.1 PFAM: CheW domain protein; KEGG: rpc:RPC_4670 CheW protein; CheW protein 5250410 4362374 RPE_4671 Rhodopseudomonas palustris BisA53 CheW protein YP_783571.1 5249928 R 316055 CDS YP_783572.1 115526661 4362375 complement(5250471..5252543) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4672 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5252543 4362375 RPE_4672 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783572.1 5250471 R 316055 CDS YP_783573.1 115526662 4362376 complement(5252646..5254841) 1 NC_008435.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4674 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5254841 4362376 RPE_4673 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783573.1 5252646 R 316055 CDS YP_783574.1 115526663 4362377 complement(5254889..5255374) 1 NC_008435.1 PFAM: CheW domain protein; KEGG: rpc:RPC_4675 CheW protein; CheW protein 5255374 4362377 RPE_4674 Rhodopseudomonas palustris BisA53 CheW protein YP_783574.1 5254889 R 316055 CDS YP_783575.1 115526664 4362378 complement(5255374..5257419) 1 NC_008435.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: rpc:RPC_4676 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase 5257419 4362378 RPE_4675 Rhodopseudomonas palustris BisA53 CheA signal transduction histidine kinase YP_783575.1 5255374 R 316055 CDS YP_783576.1 115526665 4362379 complement(5257416..5257781) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpc:RPC_4677 response regulator receiver domain protein (CheY-like); response regulator receiver protein 5257781 4362379 RPE_4676 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_783576.1 5257416 R 316055 CDS YP_783577.1 115526666 4362380 complement(5257781..5258101) 1 NC_008435.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rpc:RPC_4678 anti-sigma-factor antagonist (STAS) domain protein; anti-sigma-factor antagonist 5258101 4362380 RPE_4677 Rhodopseudomonas palustris BisA53 anti-sigma-factor antagonist YP_783577.1 5257781 R 316055 CDS YP_783578.1 115526667 4362381 5258975..5260084 1 NC_008435.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rpa:RPA1955 glutathione dependent formaldehyde dehydrogenase; alcohol dehydrogenase 5260084 4362381 RPE_4678 Rhodopseudomonas palustris BisA53 alcohol dehydrogenase YP_783578.1 5258975 D 316055 CDS YP_783579.1 115526668 4362382 5260162..5260731 1 NC_008435.1 catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 5260731 4362382 RPE_4679 Rhodopseudomonas palustris BisA53 glutathione-dependent formaldehyde-activating protein YP_783579.1 5260162 D 316055 CDS YP_783580.1 115526669 4362383 5260964..5261809 1 NC_008435.1 PFAM: putative esterase; KEGG: rpc:RPC_0099 carboxylesterase; carboxylesterase 5261809 4362383 RPE_4680 Rhodopseudomonas palustris BisA53 carboxylesterase YP_783580.1 5260964 D 316055 CDS YP_783581.1 115526670 4362384 complement(5261816..5262346) 1 NC_008435.1 KEGG: bja:bll6187 hypothetical protein; hypothetical protein 5262346 4362384 RPE_4681 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783581.1 5261816 R 316055 CDS YP_783582.1 115526671 4362385 5262483..5263664 1 NC_008435.1 KEGG: bja:blr6188 hypothetical protein; hypothetical protein 5263664 4362385 RPE_4682 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783582.1 5262483 D 316055 CDS YP_783583.1 115526672 4362386 5263675..5264643 1 NC_008435.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bja:blr6189 hypothetical protein; YVTN beta-propeller repeat-containing protein 5264643 4362386 RPE_4683 Rhodopseudomonas palustris BisA53 YVTN beta-propeller repeat-containing protein YP_783583.1 5263675 D 316055 CDS YP_783584.1 115526673 4362387 5264640..5265452 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0248 ABC transporter related; ABC transporter-like protein 5265452 4362387 RPE_4684 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783584.1 5264640 D 316055 CDS YP_783585.1 115526674 4362388 5265445..5266290 1 NC_008435.1 PFAM: ABC-2 type transporter; KEGG: bja:blr6191 ABC transporter permease protein; ABC-2 type transporter 5266290 4362388 RPE_4685 Rhodopseudomonas palustris BisA53 ABC-2 type transporter YP_783585.1 5265445 D 316055 CDS YP_783586.1 115526675 4362389 5266287..5266904 1 NC_008435.1 KEGG: bja:blr6192 hypothetical protein; hypothetical protein 5266904 4362389 RPE_4686 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783586.1 5266287 D 316055 CDS YP_783587.1 115526676 4362390 complement(5267053..5267460) 1 NC_008435.1 KEGG: rpc:RPC_4729 hypothetical protein; hypothetical protein 5267460 4362390 RPE_4687 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783587.1 5267053 R 316055 CDS YP_783588.1 115526677 4362392 5269244..5270983 1 NC_008435.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: rpc:RPC_4731 ABC transporter-like; ABC transporter 5270983 4362392 RPE_4689 Rhodopseudomonas palustris BisA53 ABC transporter YP_783588.1 5269244 D 316055 CDS YP_783589.1 115526678 4362393 complement(5271256..5272197) 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4732 hypothetical protein; hypothetical protein 5272197 4362393 RPE_4690 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783589.1 5271256 R 316055 CDS YP_783590.1 115526679 4362394 complement(5272694..5273320) 1 NC_008435.1 KEGG: rpc:RPC_4733 hypothetical protein; hypothetical protein 5273320 4362394 RPE_4691 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783590.1 5272694 R 316055 CDS YP_783591.1 115526680 4362395 complement(5273398..5274711) 1 NC_008435.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: rpc:RPC_4734 protein of unknown function DUF224, cysteine-rich region; hypothetical protein 5274711 4362395 RPE_4692 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783591.1 5273398 R 316055 CDS YP_783592.1 115526681 4362396 complement(5274708..5275949) 1 NC_008435.1 PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_4735 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 5275949 4362396 RPE_4693 Rhodopseudomonas palustris BisA53 FAD linked oxidase domain-containing protein YP_783592.1 5274708 R 316055 CDS YP_783593.1 115526682 4362397 complement(5276209..5277702) 1 NC_008435.1 PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_4736 FAD linked oxidase-like; FAD linked oxidase domain-containing protein 5277702 4362397 RPE_4694 Rhodopseudomonas palustris BisA53 FAD linked oxidase domain-containing protein YP_783593.1 5276209 R 316055 CDS YP_783594.1 115526683 4362398 complement(5277924..5278598) 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_4737 transcriptional regulator, TetR family; TetR family transcriptional regulator 5278598 4362398 RPE_4695 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_783594.1 5277924 R 316055 CDS YP_783595.1 115526684 4362399 complement(5278770..5279087) 1 NC_008435.1 PFAM: branched-chain amino acid transport; KEGG: rpb:RPB_1825 branched-chain amino acid transport; branched-chain amino acid transport 5279087 4362399 RPE_4696 Rhodopseudomonas palustris BisA53 branched-chain amino acid transport YP_783595.1 5278770 R 316055 CDS YP_783596.1 115526685 4362400 complement(5279084..5279827) 1 NC_008435.1 PFAM: AzlC family protein; KEGG: rpb:RPB_1824 AzlC-like; AzlC-like protein 5279827 4362400 RPE_4697 Rhodopseudomonas palustris BisA53 AzlC-like protein YP_783596.1 5279084 R 316055 CDS YP_783597.1 115526686 4362401 5279856..5280146 1 NC_008435.1 hypothetical protein 5280146 4362401 RPE_4698 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783597.1 5279856 D 316055 CDS YP_783598.1 115526687 4362402 complement(5280163..5282079) 1 NC_008435.1 KEGG: rpb:RPB_1818 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 5282079 4362402 RPE_4699 Rhodopseudomonas palustris BisA53 ATP-dependent metalloprotease FtsH YP_783598.1 5280163 R 316055 CDS YP_783599.1 115526688 4362403 complement(5282291..5283322) 1 NC_008435.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: ExsB family protein; PP-loop domain protein; KEGG: rpc:RPC_4744 tRNA(Ile)-lysidine synthetase-like; tRNA(Ile)-lysidine synthetase-like protein 5283322 4362403 RPE_4700 Rhodopseudomonas palustris BisA53 tRNA(Ile)-lysidine synthetase-like protein YP_783599.1 5282291 R 316055 CDS YP_783600.1 115526689 4362404 complement(5283483..5284493) 1 NC_008435.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rpc:RPC_4747 hypothetical protein; TPR repeat-containing protein 5284493 4362404 RPE_4701 Rhodopseudomonas palustris BisA53 TPR repeat-containing protein YP_783600.1 5283483 R 316055 CDS YP_783601.1 115526690 4362405 complement(5284636..5285133) 1 NC_008435.1 PFAM: OmpA/MotB domain protein; KEGG: rpc:RPC_4748 OmpA/MotB; OmpA/MotB domain-containing protein 5285133 4362405 RPE_4702 Rhodopseudomonas palustris BisA53 OmpA/MotB domain-containing protein YP_783601.1 5284636 R 316055 CDS YP_783602.1 115526691 4362406 complement(5285459..5286295) 1 NC_008435.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: rpc:RPC_0740 transcriptional regulator, AraC family; AraC family transcriptional regulator 5286295 4362406 RPE_4703 Rhodopseudomonas palustris BisA53 AraC family transcriptional regulator YP_783602.1 5285459 R 316055 CDS YP_783603.1 115526692 4362407 5286417..5287112 1 NC_008435.1 PFAM: O-methyltransferase, family 3; KEGG: rpc:RPC_0739 O-methyltransferase, family 3; O-methyltransferase family protein 5287112 4362407 RPE_4704 Rhodopseudomonas palustris BisA53 O-methyltransferase family protein YP_783603.1 5286417 D 316055 CDS YP_783604.1 115526693 4362408 complement(5287202..5287996) 1 NC_008435.1 KEGG: rpc:RPC_4749 hypothetical protein; hypothetical protein 5287996 4362408 RPE_4705 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783604.1 5287202 R 316055 CDS YP_783605.1 115526694 4362409 complement(5288139..5290481) 1 NC_008435.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpc:RPC_4750 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains); diguanylate cyclase/phosphodiesterase 5290481 4362409 RPE_4706 Rhodopseudomonas palustris BisA53 diguanylate cyclase/phosphodiesterase YP_783605.1 5288139 R 316055 CDS YP_783606.1 115526695 4362410 complement(5290685..5292037) 1 NC_008435.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 5292037 tolB 4362410 tolB Rhodopseudomonas palustris BisA53 translocation protein TolB YP_783606.1 5290685 R 316055 CDS YP_783607.1 115526696 4362411 complement(5292067..5293011) 1 NC_008435.1 KEGG: rpc:RPC_4752 putative TolA; putative TolA protein 5293011 4362411 RPE_4708 Rhodopseudomonas palustris BisA53 putative TolA protein YP_783607.1 5292067 R 316055 CDS YP_783608.1 115526697 4362412 complement(5293019..5293471) 1 NC_008435.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rpc:RPC_4753 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 5293471 4362412 RPE_4709 Rhodopseudomonas palustris BisA53 biopolymer transport protein ExbD/TolR YP_783608.1 5293019 R 316055 CDS YP_783609.1 115526698 4362413 complement(5293524..5294207) 1 NC_008435.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: rpc:RPC_4754 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 5294207 4362413 RPE_4710 Rhodopseudomonas palustris BisA53 MotA/TolQ/ExbB proton channel YP_783609.1 5293524 R 316055 CDS YP_783610.1 115526699 4362414 5294665..5295066 1 NC_008435.1 KEGG: bja:bll2420 hypothetical protein; hypothetical protein 5295066 4362414 RPE_4711 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783610.1 5294665 D 316055 CDS YP_783611.1 115526700 4362415 complement(5295128..5295604) 1 NC_008435.1 KEGG: rpc:RPC_4757 hypothetical protein; hypothetical protein 5295604 4362415 RPE_4712 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783611.1 5295128 R 316055 CDS YP_783612.1 115526701 4362416 complement(5295753..5296460) 1 NC_008435.1 PFAM: regulatory protein, TetR; KEGG: rpc:RPC_4758 transcriptional regulator, TetR family; TetR family transcriptional regulator 5296460 4362416 RPE_4713 Rhodopseudomonas palustris BisA53 TetR family transcriptional regulator YP_783612.1 5295753 R 316055 CDS YP_783613.1 115526702 4362417 complement(5296615..5297025) 1 NC_008435.1 PFAM: DGPFAETKE family protein; KEGG: rpb:RPB_1804 DGPF protein; DGPFAETKE family protein 5297025 4362417 RPE_4714 Rhodopseudomonas palustris BisA53 DGPFAETKE family protein YP_783613.1 5296615 R 316055 CDS YP_783614.1 115526703 4362418 complement(5297102..5297473) 1 NC_008435.1 KEGG: bja:bll7164 hypothetical protein; hypothetical protein 5297473 4362418 RPE_4715 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783614.1 5297102 R 316055 CDS YP_783615.1 115526704 4362419 5298077..5298865 1 NC_008435.1 PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: rpd:RPD_4158 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5298865 4362419 RPE_4716 Rhodopseudomonas palustris BisA53 short-chain dehydrogenase/reductase SDR YP_783615.1 5298077 D 316055 CDS YP_783616.1 115526705 4362420 complement(5298878..5299207) 1 NC_008435.1 TIGRFAM: prevent-host-death family protein; KEGG: rpb:RPB_0354 prevent-host-death protein; prevent-host-death family protein 5299207 4362420 RPE_4717 Rhodopseudomonas palustris BisA53 prevent-host-death family protein YP_783616.1 5298878 R 316055 CDS YP_783617.1 115526706 4362421 5299536..5299847 1 NC_008435.1 hypothetical protein 5299847 4362421 RPE_4718 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783617.1 5299536 D 316055 CDS YP_783618.1 115526707 4362422 complement(5299887..5300675) 1 NC_008435.1 PFAM: inositol monophosphatase; KEGG: rpc:RPC_4776 inositol-1(or 4)-monophosphatase; inositol-1(or 4)-monophosphatase 5300675 4362422 RPE_4719 Rhodopseudomonas palustris BisA53 inositol-1(or 4)-monophosphatase YP_783618.1 5299887 R 316055 CDS YP_783619.1 115526708 4362423 complement(5300813..5301973) 1 NC_008435.1 KEGG: rpc:RPC_4775 Sel1-like; Sel1-like protein 5301973 4362423 RPE_4720 Rhodopseudomonas palustris BisA53 Sel1-like protein YP_783619.1 5300813 R 316055 CDS YP_783620.1 115526709 4362424 complement(5301970..5302659) 1 NC_008435.1 PFAM: thiamine monophosphate synthase; KEGG: rpc:RPC_4774 thiamine monophosphate synthase; thiamine monophosphate synthase 5302659 4362424 RPE_4721 Rhodopseudomonas palustris BisA53 thiamine monophosphate synthase YP_783620.1 5301970 R 316055 CDS YP_783621.1 115526710 4362425 complement(5302666..5303721) 1 NC_008435.1 PFAM: fructose-bisphosphate aldolase, class-I; KEGG: rpb:RPB_4471 fructose-bisphosphate aldolase; fructose-bisphosphate aldolase 5303721 4362425 RPE_4722 Rhodopseudomonas palustris BisA53 fructose-bisphosphate aldolase YP_783621.1 5302666 R 316055 CDS YP_783622.1 115526711 4362426 complement(5303794..5304117) 1 NC_008435.1 PFAM: PemK family protein; KEGG: rpa:RPA0941 hypothetical protein; transcriptional modulator of MazE/toxin MazF 5304117 4362426 RPE_4723 Rhodopseudomonas palustris BisA53 transcriptional modulator of MazE/toxin MazF YP_783622.1 5303794 R 316055 CDS YP_783623.1 115526712 4362427 complement(5304114..5304371) 1 NC_008435.1 KEGG: rpa:RPA0942 hypothetical protein; hypothetical protein 5304371 4362427 RPE_4724 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783623.1 5304114 R 316055 CDS YP_783624.1 115526713 4362428 complement(5304449..5305645) 1 NC_008435.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 5305645 pgk 4362428 pgk Rhodopseudomonas palustris BisA53 phosphoglycerate kinase YP_783624.1 5304449 R 316055 CDS YP_783625.1 115526714 4362429 complement(5305642..5305956) 1 NC_008435.1 KEGG: rpc:RPC_4769 hypothetical protein; hypothetical protein 5305956 4362429 RPE_4726 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783625.1 5305642 R 316055 CDS YP_783626.1 115526715 4362430 complement(5306032..5306301) 1 NC_008435.1 hypothetical protein 5306301 4362430 RPE_4727 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783626.1 5306032 R 316055 CDS YP_783627.1 115526716 4362431 complement(5306343..5307350) 1 NC_008435.1 KEGG: rpc:RPC_4767 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 5307350 4362431 RPE_4728 Rhodopseudomonas palustris BisA53 glyceraldehyde-3-phosphate dehydrogenase, type I YP_783627.1 5306343 R 316055 CDS YP_783628.1 115526717 4362432 complement(5307478..5309469) 1 NC_008435.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 5309469 4362432 RPE_4729 Rhodopseudomonas palustris BisA53 transketolase YP_783628.1 5307478 R 316055 CDS YP_783629.1 115526718 4362433 5309706..5310077 1 NC_008435.1 KEGG: rpc:RPC_4765 hypothetical protein; hypothetical protein 5310077 4362433 RPE_4730 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783629.1 5309706 D 316055 CDS YP_783630.1 115526719 4362434 5310074..5310457 1 NC_008435.1 PFAM: protein of unknown function DUF710; KEGG: rpc:RPC_4764 protein of unknown function DUF710; hypothetical protein 5310457 4362434 RPE_4731 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783630.1 5310074 D 316055 CDS YP_783631.1 115526720 4362435 complement(5310661..5311737) 1 NC_008435.1 KEGG: nha:Nham_2660 hypothetical protein; hypothetical protein 5311737 4362435 RPE_4732 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783631.1 5310661 R 316055 CDS YP_783632.1 115526721 4362436 complement(5311774..5315445) 1 NC_008435.1 KEGG: bja:bll6496 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 5315445 4362436 RPE_4733 Rhodopseudomonas palustris BisA53 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_783632.1 5311774 R 316055 CDS YP_783633.1 115526722 4362437 5315737..5316108 1 NC_008435.1 PFAM: DGPFAETKE family protein; KEGG: rpd:RPD_4161 hypothetical protein; DGPFAETKE family protein 5316108 4362437 RPE_4734 Rhodopseudomonas palustris BisA53 DGPFAETKE family protein YP_783633.1 5315737 D 316055 CDS YP_783634.1 115526723 4362438 5316133..5317434 1 NC_008435.1 PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: rpd:RPD_4160 sigma-70 region 2; RNA polymerase ECF-subfamily sigma factor 5317434 4362438 RPE_4735 Rhodopseudomonas palustris BisA53 RNA polymerase ECF-subfamily sigma factor YP_783634.1 5316133 D 316055 CDS YP_783635.1 115526724 4362439 5317493..5317894 1 NC_008435.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3-methyltransferase; KEGG: rpc:RPC_4762 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5317894 4362439 RPE_4736 Rhodopseudomonas palustris BisA53 glyoxalase/bleomycin resistance protein/dioxygenase YP_783635.1 5317493 D 316055 CDS YP_783636.1 115526725 4362440 5318138..5319355 1 NC_008435.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_4760 drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 5319355 4362440 RPE_4737 Rhodopseudomonas palustris BisA53 Bcr/CflA subfamily drug resistance transporter YP_783636.1 5318138 D 316055 CDS YP_783637.1 115526726 4362441 complement(5319377..5319808) 1 NC_008435.1 KEGG: rpc:RPC_4777 hypothetical protein; hypothetical protein 5319808 4362441 RPE_4738 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783637.1 5319377 R 316055 CDS YP_783638.1 115526727 4362442 complement(5319832..5320752) 1 NC_008435.1 PFAM: peptidase U32; KEGG: rpc:RPC_4778 peptidase U32; peptidase U32 5320752 4362442 RPE_4739 Rhodopseudomonas palustris BisA53 peptidase U32 YP_783638.1 5319832 R 316055 CDS YP_783639.1 115526728 4362443 complement(5320843..5321820) 1 NC_008435.1 PFAM: peptidase U32; KEGG: rpc:RPC_4779 peptidase U32; peptidase U32 5321820 4362443 RPE_4740 Rhodopseudomonas palustris BisA53 peptidase U32 YP_783639.1 5320843 R 316055 CDS YP_783640.1 115526729 4362444 complement(5321824..5322366) 1 NC_008435.1 KEGG: rpc:RPC_4780 hypothetical protein; hypothetical protein 5322366 4362444 RPE_4741 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783640.1 5321824 R 316055 CDS YP_783641.1 115526730 4362445 5322477..5324000 1 NC_008435.1 TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: rpc:RPC_4781 carboxylyase-related protein; UbiD family decarboxylase 5324000 4362445 RPE_4742 Rhodopseudomonas palustris BisA53 UbiD family decarboxylase YP_783641.1 5322477 D 316055 CDS YP_783642.1 115526731 4362446 5323997..5324599 1 NC_008435.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: rpc:RPC_4782 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 5324599 4362446 RPE_4743 Rhodopseudomonas palustris BisA53 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_783642.1 5323997 D 316055 CDS YP_783643.1 115526732 4362447 complement(5324618..5325220) 1 NC_008435.1 KEGG: rpd:RPD_4330 hypothetical protein; hypothetical protein 5325220 4362447 RPE_4744 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783643.1 5324618 R 316055 CDS YP_783644.1 115526733 4362448 5325296..5325856 1 NC_008435.1 KEGG: rpd:RPD_4331 hypothetical protein; hypothetical protein 5325856 4362448 RPE_4745 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783644.1 5325296 D 316055 CDS YP_783645.1 115526734 4362449 5325859..5326065 1 NC_008435.1 SMART: helix-turn-helix domain protein; KEGG: rpd:RPD_4332 helix-turn-helix type 3; XRE family transcriptional regulator 5326065 4362449 RPE_4746 Rhodopseudomonas palustris BisA53 XRE family transcriptional regulator YP_783645.1 5325859 D 316055 CDS YP_783646.1 115526735 4362450 complement(5326268..5327689) 1 NC_008435.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: rpc:RPC_4785 peptidase U62, modulator of DNA gyrase; C69 family peptidase 5327689 4362450 RPE_4747 Rhodopseudomonas palustris BisA53 C69 family peptidase YP_783646.1 5326268 R 316055 CDS YP_783647.1 115526736 4362451 5327810..5328034 1 NC_008435.1 PFAM: protein of unknown function DUF433; KEGG: rpa:RPA0826 DUF433; hypothetical protein 5328034 4362451 RPE_4748 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783647.1 5327810 D 316055 CDS YP_783648.1 115526737 4362452 complement(5328209..5329549) 1 NC_008435.1 KEGG: rpb:RPB_1020 hypothetical protein; hypothetical protein 5329549 4362452 RPE_4749 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783648.1 5328209 R 316055 CDS YP_783649.1 115526738 4362453 complement(5329683..5330255) 1 NC_008435.1 PFAM: Invasion associated locus B family protein; KEGG: rpd:RPD_0813 invasion associated locus B; invasion associated locus B family protein 5330255 4362453 RPE_4750 Rhodopseudomonas palustris BisA53 invasion associated locus B family protein YP_783649.1 5329683 R 316055 CDS YP_783650.1 115526739 4362454 5330635..5331486 1 NC_008435.1 PFAM: cytochrome c oxidase, subunit II; cytochrome C oxidase subunit II, transmembrane region; KEGG: rpc:RPC_4787 cytochrome-c oxidase; cytochrome-c oxidase 5331486 4362454 RPE_4751 Rhodopseudomonas palustris BisA53 cytochrome-c oxidase YP_783650.1 5330635 D 316055 CDS YP_783651.1 115526740 4362455 5331554..5333194 1 NC_008435.1 PFAM: cytochrome c oxidase, subunit I; KEGG: rpc:RPC_4788 cytochrome-c oxidase; cytochrome-c oxidase 5333194 4362455 RPE_4752 Rhodopseudomonas palustris BisA53 cytochrome-c oxidase YP_783651.1 5331554 D 316055 CDS YP_783652.1 115526741 4362456 5333275..5334216 1 NC_008435.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 5334216 4362456 RPE_4753 Rhodopseudomonas palustris BisA53 protoheme IX farnesyltransferase YP_783652.1 5333275 D 316055 CDS YP_783653.1 115526742 4362457 5334228..5334401 1 NC_008435.1 KEGG: rpc:RPC_4790 CoxF protein; putative CoxF 5334401 4362457 RPE_4754 Rhodopseudomonas palustris BisA53 putative CoxF YP_783653.1 5334228 D 316055 CDS YP_783654.1 115526743 4362458 5334411..5335037 1 NC_008435.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 5335037 4362458 RPE_4755 Rhodopseudomonas palustris BisA53 cytochrome C oxidase assembly protein YP_783654.1 5334411 D 316055 CDS YP_783655.1 115526744 4362459 5335103..5335960 1 NC_008435.1 PFAM: cytochrome c oxidase, subunit III; KEGG: rpc:RPC_4792 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 5335960 4362459 RPE_4756 Rhodopseudomonas palustris BisA53 cytochrome c oxidase subunit III YP_783655.1 5335103 D 316055 CDS YP_783656.1 115526745 4362460 5336134..5336550 1 NC_008435.1 PFAM: protein of unknown function DUF983; KEGG: rpc:RPC_4793 protein of unknown function DUF983; hypothetical protein 5336550 4362460 RPE_4757 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783656.1 5336134 D 316055 CDS YP_783657.1 115526746 4362461 5336547..5337332 1 NC_008435.1 PFAM: Surfeit locus 1 family protein; KEGG: rpc:RPC_4794 surfeit locus 1; Surfeit locus 1 family protein 5337332 4362461 RPE_4758 Rhodopseudomonas palustris BisA53 Surfeit locus 1 family protein YP_783657.1 5336547 D 316055 CDS YP_783658.1 115526747 4362462 5337433..5338854 1 NC_008435.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 5338854 4362462 RPE_4759 Rhodopseudomonas palustris BisA53 threonine synthase YP_783658.1 5337433 D 316055 CDS YP_783659.1 115526748 4362463 5338851..5340140 1 NC_008435.1 PFAM: peptidase M16 domain protein; KEGG: rpc:RPC_4796 peptidase M16-like; peptidase M16 domain-containing protein 5340140 4362463 RPE_4760 Rhodopseudomonas palustris BisA53 peptidase M16 domain-containing protein YP_783659.1 5338851 D 316055 CDS YP_783660.1 115526749 4362464 5340185..5340772 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_4797 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5340772 4362464 RPE_4761 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_783660.1 5340185 D 316055 CDS YP_783661.1 115526750 4362465 5340881..5341537 1 NC_008435.1 KEGG: rpc:RPC_4798 hypothetical protein; hypothetical protein 5341537 4362465 RPE_4762 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783661.1 5340881 D 316055 CDS YP_783662.1 115526751 4362466 complement(5342083..5342589) 1 NC_008435.1 TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rpc:RPC_4799 4-hydroxybenzoyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase 5342589 4362466 RPE_4763 Rhodopseudomonas palustris BisA53 4-hydroxybenzoyl-CoA thioesterase YP_783662.1 5342083 R 316055 CDS YP_783663.1 115526752 4362467 complement(5342665..5343543) 1 NC_008435.1 KEGG: bja:blr1538 hypothetical protein; hypothetical protein 5343543 4362467 RPE_4764 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783663.1 5342665 R 316055 CDS YP_783664.1 115526753 4362468 complement(5343626..5343916) 1 NC_008435.1 PFAM: plasmid stabilization system; KEGG: rpc:RPC_4802 addiction module toxin, RelE/StbE; plasmid stabilization system protein 5343916 4362468 RPE_4765 Rhodopseudomonas palustris BisA53 plasmid stabilization system protein YP_783664.1 5343626 R 316055 CDS YP_783665.1 115526754 4362469 complement(5344313..5344519) 1 NC_008435.1 KEGG: rpc:RPC_4801 hypothetical protein; hypothetical protein 5344519 4362469 RPE_4766 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783665.1 5344313 R 316055 CDS YP_783666.1 115526755 4362470 complement(5344578..5345693) 1 NC_008435.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 5345693 ruvB 4362470 ruvB Rhodopseudomonas palustris BisA53 Holliday junction DNA helicase RuvB YP_783666.1 5344578 R 316055 CDS YP_783667.1 115526756 4362471 complement(5345785..5346213) 1 NC_008435.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: rpa:RPA1101 cytidine deaminase; hypothetical protein 5346213 4362471 RPE_4768 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783667.1 5345785 R 316055 CDS YP_783668.1 115526757 4362472 complement(5346210..5346827) 1 NC_008435.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 5346827 ruvA 4362472 ruvA Rhodopseudomonas palustris BisA53 Holliday junction DNA helicase RuvA YP_783668.1 5346210 R 316055 CDS YP_783669.1 115526758 4362473 complement(5346979..5347503) 1 NC_008435.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 5347503 ruvC 4362473 ruvC Rhodopseudomonas palustris BisA53 Holliday junction resolvase YP_783669.1 5346979 R 316055 CDS YP_783670.1 115526759 4362474 complement(5347575..5348321) 1 NC_008435.1 PFAM: protein of unknown function DUF28; KEGG: rpc:RPC_4807 protein of unknown function DUF28; hypothetical protein 5348321 4362474 RPE_4771 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783670.1 5347575 R 316055 CDS YP_783671.1 115526760 4362475 5348529..5350283 1 NC_008435.1 PFAM: chemotaxis sensory transducer; KEGG: rpc:RPC_4808 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5350283 4362475 RPE_4772 Rhodopseudomonas palustris BisA53 methyl-accepting chemotaxis sensory transducer YP_783671.1 5348529 D 316055 CDS YP_783672.1 115526761 4362476 5350614..5352440 1 NC_008435.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rpc:RPC_4810 radical SAM; radical SAM domain-containing protein 5352440 4362476 RPE_4773 Rhodopseudomonas palustris BisA53 radical SAM domain-containing protein YP_783672.1 5350614 D 316055 CDS YP_783673.1 115526762 4362477 complement(5352632..5353456) 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; PFAM: metallophosphoesterase; KEGG: rpc:RPC_4811 hypothetical protein; hypothetical protein 5353456 4362477 RPE_4774 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783673.1 5352632 R 316055 CDS YP_783674.1 115526763 4362478 complement(5353458..5354045) 1 NC_008435.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: rpc:RPC_4812 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 5354045 4362478 RPE_4775 Rhodopseudomonas palustris BisA53 5-formyltetrahydrofolate cyclo-ligase YP_783674.1 5353458 R 316055 CDS YP_783675.1 115526764 4362479 complement(5354416..5354910) 1 NC_008435.1 PFAM: H+-transporting two-sector ATPase, B/B' subunit; KEGG: rpc:RPC_4813 H+-transporting two-sector ATPase, B/B' subunit; H+-transporting two-sector ATPase subunit B/B' 5354910 4362479 RPE_4776 Rhodopseudomonas palustris BisA53 H+-transporting two-sector ATPase subunit B/B' YP_783675.1 5354416 R 316055 CDS YP_783676.1 115526765 4362480 complement(5354915..5355460) 1 NC_008435.1 PFAM: H+-transporting two-sector ATPase, B/B' subunit; KEGG: rpc:RPC_4814 H+-transporting two-sector ATPase, B/B' subunit; H+-transporting two-sector ATPase subunit B/B' 5355460 4362480 RPE_4777 Rhodopseudomonas palustris BisA53 H+-transporting two-sector ATPase subunit B/B' YP_783676.1 5354915 R 316055 CDS YP_783677.1 115526766 4362481 complement(5355514..5355741) 1 NC_008435.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 5355741 4362481 RPE_4778 Rhodopseudomonas palustris BisA53 F0F1 ATP synthase subunit C YP_783677.1 5355514 R 316055 CDS YP_783678.1 115526767 4362482 complement(5355781..5356530) 1 NC_008435.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 5356530 4362482 RPE_4779 Rhodopseudomonas palustris BisA53 F0F1 ATP synthase subunit A YP_783678.1 5355781 R 316055 CDS YP_783679.1 115526768 4362483 complement(5356592..5356975) 1 NC_008435.1 KEGG: nha:Nham_0270 FoF1 ATP synthase, subunit I; FoF1 ATP synthase subunit I 5356975 4362483 RPE_4780 Rhodopseudomonas palustris BisA53 FoF1 ATP synthase subunit I YP_783679.1 5356592 R 316055 CDS YP_783680.1 115526769 4362484 5357253..5357876 1 NC_008435.1 PFAM: DSBA oxidoreductase; KEGG: rpc:RPC_4818 DsbA oxidoreductase; DSBA oxidoreductase 5357876 4362484 RPE_4781 Rhodopseudomonas palustris BisA53 DSBA oxidoreductase YP_783680.1 5357253 D 316055 CDS YP_783681.1 115526770 4362485 5357924..5358523 1 NC_008435.1 KEGG: rpc:RPC_4819 hypothetical protein; hypothetical protein 5358523 4362485 RPE_4782 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783681.1 5357924 D 316055 CDS YP_783682.1 115526771 4362486 5358691..5359164 1 NC_008435.1 PFAM: protein of unknown function UPF0047; KEGG: rpc:RPC_4820 protein of unknown function UPF0047; hypothetical protein 5359164 4362486 RPE_4783 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783682.1 5358691 D 316055 CDS YP_783683.1 115526772 4362487 complement(5359447..5361111) 1 NC_008435.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rpd:RPD_0835 general substrate transporter; general substrate transporter 5361111 4362487 RPE_4784 Rhodopseudomonas palustris BisA53 general substrate transporter YP_783683.1 5359447 R 316055 CDS YP_783684.1 115526773 4362488 5361436..5362107 1 NC_008435.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: rpc:RPC_4822 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 5362107 4362488 RPE_4785 Rhodopseudomonas palustris BisA53 two component LuxR family transcriptional regulator YP_783684.1 5361436 D 316055 CDS YP_783685.1 115526774 4362489 complement(5362268..5365768) 1 NC_008435.1 PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4823 periplasmic sensor hybrid histidine kinase; periplasmic sensor hybrid histidine kinase 5365768 4362489 RPE_4786 Rhodopseudomonas palustris BisA53 periplasmic sensor hybrid histidine kinase YP_783685.1 5362268 R 316055 CDS YP_783686.1 115526775 4362490 complement(5365984..5367213) 1 NC_008435.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 5367213 4362490 RPE_4787 Rhodopseudomonas palustris BisA53 5-aminolevulinate synthase YP_783686.1 5365984 R 316055 CDS YP_783687.1 115526776 4362491 complement(5367393..5368457) 1 NC_008435.1 PFAM: beta-lactamase domain protein; KEGG: rpc:RPC_4825 beta-lactamase-like; beta-lactamase domain-containing protein 5368457 4362491 RPE_4788 Rhodopseudomonas palustris BisA53 beta-lactamase domain-containing protein YP_783687.1 5367393 R 316055 CDS YP_783688.1 115526777 4362492 complement(5368812..5369498) 1 NC_008435.1 PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: rpc:RPC_4826 OmpA-like transmembrane region; OmpA domain-containing protein 5369498 4362492 RPE_4789 Rhodopseudomonas palustris BisA53 OmpA domain-containing protein YP_783688.1 5368812 R 316055 CDS YP_783689.1 115526778 4362493 5369870..5370085 1 NC_008435.1 KEGG: nha:Nham_3429 hypothetical protein; hypothetical protein 5370085 4362493 RPE_4790 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783689.1 5369870 D 316055 CDS YP_783690.1 115526779 4362494 5370087..5370848 1 NC_008435.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_4828 ABC transporter related; ABC transporter-like protein 5370848 4362494 RPE_4791 Rhodopseudomonas palustris BisA53 ABC transporter-like protein YP_783690.1 5370087 D 316055 CDS YP_783691.1 115526780 4362495 5370845..5371723 1 NC_008435.1 PFAM: ABC-3 protein; KEGG: rpc:RPC_4829 ABC-3; hypothetical protein 5371723 4362495 RPE_4792 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783691.1 5370845 D 316055 CDS YP_783692.1 115526781 4362496 5371736..5372686 1 NC_008435.1 PFAM: periplasmic solute binding protein; KEGG: rpb:RPB_4557 periplasmic solute binding protein; periplasmic solute binding protein 5372686 4362496 RPE_4793 Rhodopseudomonas palustris BisA53 periplasmic solute binding protein YP_783692.1 5371736 D 316055 CDS YP_783693.1 115526782 4362497 5372824..5373876 1 NC_008435.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: rpb:RPB_4556 cobalamin synthesis protein, P47K; cobalamin synthesis protein, P47K 5373876 4362497 RPE_4794 Rhodopseudomonas palustris BisA53 cobalamin synthesis protein, P47K YP_783693.1 5372824 D 316055 CDS YP_783694.1 115526783 4362498 5373873..5374892 1 NC_008435.1 SMART: WD-40 repeat protein; KEGG: rpc:RPC_4832 WD-40 repeat; WD-40 repeat-containing protein 5374892 4362498 RPE_4795 Rhodopseudomonas palustris BisA53 WD-40 repeat-containing protein YP_783694.1 5373873 D 316055 CDS YP_783695.1 115526784 4362499 5374974..5375312 1 NC_008435.1 KEGG: rpc:RPC_4833 hypothetical protein; hypothetical protein 5375312 4362499 RPE_4796 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783695.1 5374974 D 316055 CDS YP_783696.1 115526785 4362500 complement(5375672..5376703) 1 NC_008435.1 hypothetical protein 5376703 4362500 RPE_4797 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783696.1 5375672 R 316055 CDS YP_783697.1 115526786 4362501 complement(5376815..5377102) 1 NC_008435.1 hypothetical protein 5377102 4362501 RPE_4798 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783697.1 5376815 R 316055 CDS YP_783698.1 115526787 4362502 complement(5377584..5379011) 1 NC_008435.1 PFAM: homospermidine synthase; KEGG: rpc:RPC_4834 homospermidine synthase; homospermidine synthase 5379011 4362502 RPE_4799 Rhodopseudomonas palustris BisA53 homospermidine synthase YP_783698.1 5377584 R 316055 CDS YP_783699.1 115526788 4362503 complement(5379099..5379506) 1 NC_008435.1 PFAM: Endoribonuclease L-PSP; KEGG: rpa:RPA0867 endoribonuclease L-PSP; endoribonuclease L-PSP 5379506 4362503 RPE_4800 Rhodopseudomonas palustris BisA53 endoribonuclease L-PSP YP_783699.1 5379099 R 316055 CDS YP_783700.1 115526789 4362504 complement(5379810..5380397) 1 NC_008435.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA0869 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 5380397 4362504 RPE_4801 Rhodopseudomonas palustris BisA53 N-acetyltransferase GCN5 YP_783700.1 5379810 R 316055 CDS YP_783701.1 115526790 4362505 complement(5380582..5381724) 1 NC_008435.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rpc:RPC_4837 ornithine decarboxylase; ornithine decarboxylase 5381724 4362505 RPE_4802 Rhodopseudomonas palustris BisA53 ornithine decarboxylase YP_783701.1 5380582 R 316055 CDS YP_783702.1 115526791 4362506 complement(5382436..5382696) 1 NC_008435.1 KEGG: rpb:RPB_4546 hypothetical protein; hypothetical protein 5382696 4362506 RPE_4803 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783702.1 5382436 R 316055 CDS YP_783703.1 115526792 4362507 5382900..5384990 1 NC_008435.1 PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: rpc:RPC_4839 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp 5384990 4362507 RPE_4804 Rhodopseudomonas palustris BisA53 peptidyl-dipeptidase Dcp YP_783703.1 5382900 D 316055 CDS YP_783704.1 115526793 4362508 5384990..5385637 1 NC_008435.1 PFAM: protein of unknown function DUF1007; KEGG: rpb:RPB_4544 protein of unknown function DUF1007; hypothetical protein 5385637 4362508 RPE_4805 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783704.1 5384990 D 316055 CDS YP_783705.1 115526794 4362509 5385634..5386740 1 NC_008435.1 PFAM: high-affinity nickel-transporter; KEGG: rpc:RPC_4841 high-affinity nickel-transporter; high-affinity nickel-transporter 5386740 4362509 RPE_4806 Rhodopseudomonas palustris BisA53 high-affinity nickel-transporter YP_783705.1 5385634 D 316055 CDS YP_783706.1 115526795 4362510 5386904..5387941 1 NC_008435.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 5387941 hemH 4362510 hemH Rhodopseudomonas palustris BisA53 ferrochelatase YP_783706.1 5386904 D 316055 CDS YP_783707.1 115526796 4362511 5388098..5389093 1 NC_008435.1 PFAM: band 7 protein; KEGG: rpd:RPD_0862 band 7 protein; hypothetical protein 5389093 4362511 RPE_4808 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783707.1 5388098 D 316055 CDS YP_783708.1 115526797 4362512 5389194..5389631 1 NC_008435.1 PFAM: protein of unknown function DUF107; KEGG: rpc:RPC_4844 protein of unknown function DUF107; hypothetical protein 5389631 4362512 RPE_4809 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783708.1 5389194 D 316055 CDS YP_783709.1 115526798 4362513 complement(5389875..5390246) 1 NC_008435.1 KEGG: rpc:RPC_4845 hypothetical protein; hypothetical protein 5390246 4362513 RPE_4810 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783709.1 5389875 R 316055 CDS YP_783710.1 115526799 4362514 complement(5390299..5390904) 1 NC_008435.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 5390904 recR 4362514 recR Rhodopseudomonas palustris BisA53 recombination protein RecR YP_783710.1 5390299 R 316055 CDS YP_783711.1 115526800 4362515 complement(5390907..5391224) 1 NC_008435.1 PFAM: conserved hypothetical protein 103; KEGG: rpc:RPC_4847 conserved hypothetical protein 103; hypothetical protein 5391224 4362515 RPE_4812 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783711.1 5390907 R 316055 CDS YP_783712.1 115526801 4362516 complement(5391268..5393157) 1 NC_008435.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 5393157 4362516 RPE_4813 Rhodopseudomonas palustris BisA53 DNA polymerase III subunits gamma and tau YP_783712.1 5391268 R 316055 CDS YP_783713.1 115526802 4362518 5393583..5394008 1 NC_008435.1 PFAM: histidine triad (HIT) protein; KEGG: rpc:RPC_4849 histidine triad (HIT) protein; histidine triad (HIT) protein 5394008 4362518 RPE_4814 Rhodopseudomonas palustris BisA53 histidine triad (HIT) protein YP_783713.1 5393583 D 316055 CDS YP_783714.1 115526803 4362519 5394117..5395073 1 NC_008435.1 PFAM: NUDIX hydrolase; KEGG: rpc:RPC_4850 NUDIX hydrolase; NUDIX hydrolase 5395073 4362519 RPE_4815 Rhodopseudomonas palustris BisA53 NUDIX hydrolase YP_783714.1 5394117 D 316055 CDS YP_783715.1 115526804 4362520 5395082..5396014 1 NC_008435.1 PFAM: PfkB domain protein; KEGG: rpc:RPC_4851 PfkB; ribokinase-like domain-containing protein 5396014 4362520 RPE_4816 Rhodopseudomonas palustris BisA53 ribokinase-like domain-containing protein YP_783715.1 5395082 D 316055 CDS YP_783716.1 115526805 4362521 complement(5396058..5396582) 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4853 hypothetical protein; hypothetical protein 5396582 4362521 RPE_4817 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783716.1 5396058 R 316055 CDS YP_783717.1 115526806 4362522 complement(5396705..5399320) 1 NC_008435.1 KEGG: rpb:RPB_0505 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent, C-terminal domain protein; SMART: DEAD/DEAH box helicase domain protein; ATP-dependent helicase HrpB 5399320 4362522 RPE_4818 Rhodopseudomonas palustris BisA53 ATP-dependent helicase HrpB YP_783717.1 5396705 R 316055 CDS YP_783718.1 115526807 4362523 5399524..5400582 1 NC_008435.1 PFAM: acyltransferase 3; KEGG: rpc:RPC_4855 acyltransferase 3; acyltransferase 3 5400582 4362523 RPE_4819 Rhodopseudomonas palustris BisA53 acyltransferase 3 YP_783718.1 5399524 D 316055 CDS YP_783719.1 115526808 4362524 complement(5400756..5401349) 1 NC_008435.1 KEGG: rpb:RPB_0849 hypothetical protein; hypothetical protein 5401349 4362524 RPE_4820 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783719.1 5400756 R 316055 CDS YP_783720.1 115526809 4362525 5401497..5404535 1 NC_008435.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 5404535 4362525 RPE_4821 Rhodopseudomonas palustris BisA53 DNA polymerase I YP_783720.1 5401497 D 316055 CDS YP_783721.1 115526810 4362526 5404555..5405199 1 NC_008435.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 5405199 pyrE 4362526 pyrE Rhodopseudomonas palustris BisA53 orotate phosphoribosyltransferase YP_783721.1 5404555 D 316055 CDS YP_783722.1 115526811 4362527 5405339..5406127 1 NC_008435.1 KEGG: rpc:RPC_4859 hypothetical protein; hypothetical protein 5406127 4362527 RPE_4823 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783722.1 5405339 D 316055 CDS YP_783723.1 115526812 4362528 complement(5406130..5406561) 1 NC_008435.1 KEGG: rpc:RPC_4860 hypothetical protein; hypothetical protein 5406561 4362528 RPE_4824 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783723.1 5406130 R 316055 CDS YP_783724.1 115526813 4362529 5406618..5406983 1 NC_008435.1 hypothetical protein 5406983 4362529 RPE_4825 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783724.1 5406618 D 316055 CDS YP_783725.1 115526814 4362530 5407014..5409530 1 NC_008435.1 KEGG: rpc:RPC_4861 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase 5409530 4362530 RPE_4826 Rhodopseudomonas palustris BisA53 glycogen/starch/alpha-glucan phosphorylase YP_783725.1 5407014 D 316055 CDS YP_783726.1 115526815 4362531 5409664..5410497 1 NC_008435.1 KEGG: rpd:RPD_0951 hypothetical protein; hypothetical protein 5410497 4362531 RPE_4827 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783726.1 5409664 D 316055 CDS YP_783727.1 115526816 4362532 5410509..5411165 1 NC_008435.1 PFAM: ChaC family protein; KEGG: rpd:RPD_0947 ChaC-like protein; ChaC-like protein 5411165 4362532 RPE_4828 Rhodopseudomonas palustris BisA53 ChaC-like protein YP_783727.1 5410509 D 316055 CDS YP_783728.1 115526817 4362533 complement(5411159..5411959) 1 NC_008435.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: rpc:RPC_4864 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 5411959 4362533 RPE_4829 Rhodopseudomonas palustris BisA53 phospholipid/glycerol acyltransferase YP_783728.1 5411159 R 316055 CDS YP_783729.1 115526818 4362534 complement(5411971..5412672) 1 NC_008435.1 PFAM: protein of unknown function DUF218; KEGG: rpc:RPC_4865 protein of unknown function DUF218; hypothetical protein 5412672 4362534 RPE_4830 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783729.1 5411971 R 316055 CDS YP_783730.1 115526819 4362535 complement(5412866..5413837) 1 NC_008435.1 PFAM: protein of unknown function DUF214; KEGG: rpc:RPC_4866 protein of unknown function DUF214; hypothetical protein 5413837 4362535 RPE_4831 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783730.1 5412866 R 316055 CDS YP_783731.1 115526820 4362536 complement(5413830..5414489) 1 NC_008435.1 KEGG: rpa:RPA4736 putative cell division ATP-binding protein FtsE, ABC type transporter; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 5414489 4362536 RPE_4832 Rhodopseudomonas palustris BisA53 cell division ATP-binding protein FtsE YP_783731.1 5413830 R 316055 CDS YP_783732.1 115526821 4362537 5414678..5415658 1 NC_008435.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: rpc:RPC_4868 zinc finger/thioredoxin putative; Zinc finger/thioredoxin putative 5415658 4362537 RPE_4833 Rhodopseudomonas palustris BisA53 Zinc finger/thioredoxin putative YP_783732.1 5414678 D 316055 CDS YP_783733.1 115526822 4362538 5415661..5416032 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpd:RPD_0941 response regulator receiver; response regulator receiver protein 5416032 4362538 RPE_4834 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_783733.1 5415661 D 316055 CDS YP_783734.1 115526823 4362539 5416175..5417809 1 NC_008435.1 KEGG: rpc:RPC_4870 hypothetical protein; hypothetical protein 5417809 4362539 RPE_4835 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783734.1 5416175 D 316055 CDS YP_783735.1 115526824 4362540 5417790..5419043 1 NC_008435.1 KEGG: rpc:RPC_4870 hypothetical protein; hypothetical protein 5419043 4362540 RPE_4836 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783735.1 5417790 D 316055 CDS YP_783736.1 115526825 4362541 5419177..5420664 1 NC_008435.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: rpc:RPC_4871 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 5420664 4362541 RPE_4837 Rhodopseudomonas palustris BisA53 pyridoxal-dependent decarboxylase YP_783736.1 5419177 D 316055 CDS YP_783737.1 115526826 4362542 complement(5420651..5423209) 1 NC_008435.1 TIGRFAM: conserved hypothetical protein; KEGG: rpc:RPC_4872 hypothetical protein; hypothetical protein 5423209 4362542 RPE_4838 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783737.1 5420651 R 316055 CDS YP_783738.1 115526827 4362543 5423340..5423798 1 NC_008435.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: rpd:RPD_0939 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 5423798 4362543 RPE_4839 Rhodopseudomonas palustris BisA53 carboxymuconolactone decarboxylase YP_783738.1 5423340 D 316055 CDS YP_783739.1 115526828 4362544 complement(5424024..5425289) 1 NC_008435.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rpb:RPB_0829 diaminopimelate decarboxylase; diaminopimelate decarboxylase 5425289 4362544 RPE_4840 Rhodopseudomonas palustris BisA53 diaminopimelate decarboxylase YP_783739.1 5424024 R 316055 CDS YP_783740.1 115526829 4362545 complement(5425313..5425564) 1 NC_008435.1 KEGG: rpc:RPC_4874 hypothetical protein; hypothetical protein 5425564 4362545 RPE_4841 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783740.1 5425313 R 316055 CDS YP_783741.1 115526830 4362546 complement(5425644..5427098) 1 NC_008435.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 5427098 4362546 RPE_4842 Rhodopseudomonas palustris BisA53 argininosuccinate lyase YP_783741.1 5425644 R 316055 CDS YP_783742.1 115526831 4362547 5427164..5427838 1 NC_008435.1 PFAM: Redoxin domain protein; KEGG: rpc:RPC_4876 thioredoxin-like; redoxin domain-containing protein 5427838 4362547 RPE_4843 Rhodopseudomonas palustris BisA53 redoxin domain-containing protein YP_783742.1 5427164 D 316055 CDS YP_783743.1 115526832 4362548 5427951..5428310 1 NC_008435.1 PFAM: protein of unknown function DUF1428; KEGG: rpd:RPD_0934 protein of unknown function DUF1428; hypothetical protein 5428310 4362548 RPE_4844 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783743.1 5427951 D 316055 CDS YP_783744.1 115526833 4362549 complement(5428323..5428523) 1 NC_008435.1 KEGG: rpc:RPC_4877 hypothetical protein; hypothetical protein 5428523 4362549 RPE_4845 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783744.1 5428323 R 316055 CDS YP_783745.1 115526834 4362550 complement(5428669..5428878) 1 NC_008435.1 hypothetical protein 5428878 4362550 RPE_4846 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783745.1 5428669 R 316055 CDS YP_783746.1 115526835 4362551 complement(5429125..5430006) 1 NC_008435.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 5430006 4362551 RPE_4847 Rhodopseudomonas palustris BisA53 3-hydroxybutyryl-CoA dehydrogenase YP_783746.1 5429125 R 316055 CDS YP_783747.1 115526836 4362552 complement(5430138..5431085) 1 NC_008435.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: rpd:RPD_0931 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 5431085 4362552 RPE_4848 Rhodopseudomonas palustris BisA53 electron transfer flavoprotein subunit alpha YP_783747.1 5430138 R 316055 CDS YP_783748.1 115526837 4362553 complement(5431085..5431834) 1 NC_008435.1 PFAM: electron transfer flavoprotein beta-subunit; KEGG: rpa:RPA4750 electron transfer flavoprotein beta chain, (ETFSS); electron transfer flavoprotein subunit beta 5431834 4362553 RPE_4849 Rhodopseudomonas palustris BisA53 electron transfer flavoprotein subunit beta YP_783748.1 5431085 R 316055 CDS YP_783749.1 115526838 4362554 complement(5431945..5432517) 1 NC_008435.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rpc:RPC_4881 ATP; ATP--cobalamin adenosyltransferase 5432517 4362554 RPE_4850 Rhodopseudomonas palustris BisA53 ATP--cobalamin adenosyltransferase YP_783749.1 5431945 R 316055 CDS YP_783750.1 115526839 4362555 complement(5432551..5432757) 1 NC_008435.1 KEGG: rpd:RPD_0928 hypoxia induced protein conserved region; hypoxia induced protein 5432757 4362555 RPE_4851 Rhodopseudomonas palustris BisA53 hypoxia induced protein YP_783750.1 5432551 R 316055 CDS YP_783751.1 115526840 4362556 5432870..5433763 1 NC_008435.1 PFAM: ribonuclease BN; KEGG: rpc:RPC_4883 ribonuclease BN; ribonuclease BN 5433763 4362556 RPE_4852 Rhodopseudomonas palustris BisA53 ribonuclease BN YP_783751.1 5432870 D 316055 CDS YP_783752.1 115526841 4362557 complement(5433690..5434850) 1 NC_008435.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4884 histidine kinase; histidine kinase 5434850 4362557 RPE_4853 Rhodopseudomonas palustris BisA53 histidine kinase YP_783752.1 5433690 R 316055 CDS YP_783753.1 115526842 4362558 complement(5435155..5436036) 1 NC_008435.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 5436036 4362558 RPE_4854 Rhodopseudomonas palustris BisA53 glutamyl-Q tRNA(Asp) synthetase YP_783753.1 5435155 R 316055 CDS YP_783754.1 115526843 4362559 5436074..5436736 1 NC_008435.1 PFAM: HhH-GPD family protein; KEGG: rpa:RPA4755 possible DNA-3-methyladenine glycosidase II; hypothetical protein 5436736 4362559 RPE_4855 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783754.1 5436074 D 316055 CDS YP_783755.1 115526844 4362560 5436892..5439615 1 NC_008435.1 KEGG: nwi:Nwi_0071 hypothetical protein; hypothetical protein 5439615 4362560 RPE_4856 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783755.1 5436892 D 316055 CDS YP_783756.1 115526845 4362561 5439624..5440199 1 NC_008435.1 hypothetical protein 5440199 4362561 RPE_4857 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783756.1 5439624 D 316055 CDS YP_783757.1 115526846 4362562 complement(5440180..5441010) 1 NC_008435.1 KEGG: rpb:RPB_0080 hypothetical protein; hypothetical protein 5441010 4362562 RPE_4858 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783757.1 5440180 R 316055 CDS YP_783758.1 115526847 4362563 complement(5441096..5441698) 1 NC_008435.1 KEGG: rpc:RPC_0722 hypothetical protein; hypothetical protein 5441698 4362563 RPE_4859 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783758.1 5441096 R 316055 CDS YP_783759.1 115526848 4362564 complement(5441695..5442027) 1 NC_008435.1 KEGG: rpc:RPC_0723 hypothetical protein; hypothetical protein 5442027 4362564 RPE_4860 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783759.1 5441695 R 316055 CDS YP_783760.1 115526849 4362565 complement(5442281..5442550) 1 NC_008435.1 KEGG: rpa:RPA4640 hypothetical protein; hypothetical protein 5442550 4362565 RPE_4861 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783760.1 5442281 R 316055 CDS YP_783761.1 115526850 4362566 complement(5442582..5443061) 1 NC_008435.1 PFAM: response regulator receiver; KEGG: rpa:RPA4322 response regulator receiver (CheY-like protein); response regulator receiver protein 5443061 4362566 RPE_4862 Rhodopseudomonas palustris BisA53 response regulator receiver protein YP_783761.1 5442582 R 316055 CDS YP_783762.1 115526851 4362567 complement(5443221..5445392) 1 NC_008435.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: rpc:RPC_4889 PAS/PAC sensor hybrid histidine kinase; PAS/PAC sensor hybrid histidine kinase 5445392 4362567 RPE_4863 Rhodopseudomonas palustris BisA53 PAS/PAC sensor hybrid histidine kinase YP_783762.1 5443221 R 316055 CDS YP_783763.1 115526852 4362568 5445884..5446249 1 NC_008435.1 PFAM: PRC-barrel domain protein; KEGG: rpc:RPC_4890 PRC-barrel; PRC-barrel domain-containing protein 5446249 4362568 RPE_4864 Rhodopseudomonas palustris BisA53 PRC-barrel domain-containing protein YP_783763.1 5445884 D 316055 CDS YP_783764.1 115526853 4362569 complement(5446611..5448227) 1 NC_008435.1 PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: rpa:RPA4759 glycosyl hydrolase, family 13; alpha amylase 5448227 4362569 RPE_4865 Rhodopseudomonas palustris BisA53 alpha amylase YP_783764.1 5446611 R 316055 CDS YP_783765.1 115526854 4362570 5448599..5449126 1 NC_008435.1 KEGG: rpc:RPC_4892 hypothetical protein; hypothetical protein 5449126 4362570 RPE_4866 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783765.1 5448599 D 316055 CDS YP_783766.1 115526855 4362571 5449320..5449901 1 NC_008435.1 KEGG: rpd:RPD_2376 cytochrome c family protein; cytochrome c family protein 5449901 4362571 RPE_4867 Rhodopseudomonas palustris BisA53 cytochrome c family protein YP_783766.1 5449320 D 316055 CDS YP_783767.1 115526856 4362572 complement(5449989..5450327) 1 NC_008435.1 PFAM: DNA polymerase, beta domain protein region; KEGG: rpd:RPD_1926 DNA polymerase, beta-like region; DNA polymerase subunit beta 5450327 4362572 RPE_4868 Rhodopseudomonas palustris BisA53 DNA polymerase subunit beta YP_783767.1 5449989 R 316055 CDS YP_783768.1 115526857 4362574 5450845..5451423 1 NC_008435.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: rpc:RPC_4898 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 5451423 4362574 RPE_4869 Rhodopseudomonas palustris BisA53 methylated-DNA--protein-cysteine methyltransferase YP_783768.1 5450845 D 316055 CDS YP_783769.1 115526858 4362575 complement(5451458..5452864) 1 NC_008435.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: rpa:RPA4763 possible cation efflux pump; multi anti extrusion protein MatE 5452864 4362575 RPE_4870 Rhodopseudomonas palustris BisA53 multi anti extrusion protein MatE YP_783769.1 5451458 R 316055 CDS YP_783770.1 115526859 4362576 5453115..5454464 1 NC_008435.1 KEGG: rpb:RPB_0795 L-sorbosone dehydrogenase; L-sorbosone dehydrogenase 5454464 4362576 RPE_4871 Rhodopseudomonas palustris BisA53 L-sorbosone dehydrogenase YP_783770.1 5453115 D 316055 CDS YP_783771.1 115526860 4362577 5454654..5456651 1 NC_008435.1 TIGRFAM: Twin-arginine translocation pathway signal; PFAM: metallophosphoesterase; KEGG: rpd:RPD_0905 twin-arginine translocation pathway signal; metallophosphoesterase 5456651 4362577 RPE_4872 Rhodopseudomonas palustris BisA53 metallophosphoesterase YP_783771.1 5454654 D 316055 CDS YP_783772.1 115526861 4362578 complement(5456691..5457311) 1 NC_008435.1 PFAM: protein of unknown function DUF820; KEGG: rpc:RPC_0006 protein of unknown function DUF820; hypothetical protein 5457311 4362578 RPE_4873 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783772.1 5456691 R 316055 CDS YP_783773.1 115526862 4362579 5457446..5458066 1 NC_008435.1 PFAM: protein of unknown function DUF820; KEGG: rpc:RPC_4289 hypothetical protein; hypothetical protein 5458066 4362579 RPE_4874 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783773.1 5457446 D 316055 CDS YP_783774.1 115526863 4362580 5458170..5458517 1 NC_008435.1 PFAM: DNA polymerase, beta domain protein region; KEGG: rpc:RPC_4901 DNA polymerase, beta-like region; DNA polymerase subunit beta 5458517 4362580 RPE_4875 Rhodopseudomonas palustris BisA53 DNA polymerase subunit beta YP_783774.1 5458170 D 316055 CDS YP_783775.1 115526864 4362581 complement(5458523..5459629) 1 NC_008435.1 Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 5459629 4362581 RPE_4876 Rhodopseudomonas palustris BisA53 2'-deoxycytidine 5'-triphosphate deaminase YP_783775.1 5458523 R 316055 CDS YP_783776.1 115526865 4362582 5459887..5461086 1 NC_008435.1 catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis; O-succinylhomoserine sulfhydrylase 5461086 4362582 RPE_4877 Rhodopseudomonas palustris BisA53 O-succinylhomoserine sulfhydrylase YP_783776.1 5459887 D 316055 CDS YP_783777.1 115526866 4362583 complement(5461323..5462273) 1 NC_008435.1 PFAM: lipolytic enzyme, G-D-S-L family; KEGG: rpc:RPC_4910 lipolytic enzyme, G-D-S-L; GDSL family lipase 5462273 4362583 RPE_4878 Rhodopseudomonas palustris BisA53 GDSL family lipase YP_783777.1 5461323 R 316055 CDS YP_783778.1 115526867 4362584 complement(5462273..5463037) 1 NC_008435.1 KEGG: rpc:RPC_4911 hypothetical protein; hypothetical protein 5463037 4362584 RPE_4879 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783778.1 5462273 R 316055 CDS YP_783779.1 115526868 4362585 complement(5463034..5464269) 1 NC_008435.1 KEGG: rpc:RPC_4912 putative OpgC protein; putative OpgC protein 5464269 4362585 RPE_4880 Rhodopseudomonas palustris BisA53 putative OpgC protein YP_783779.1 5463034 R 316055 CDS YP_783780.1 115526869 4362586 5464462..5464953 1 NC_008435.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 5464953 apaG 4362586 apaG Rhodopseudomonas palustris BisA53 ApaG protein YP_783780.1 5464462 D 316055 CDS YP_783781.1 115526870 4362587 complement(5465154..5466155) 1 NC_008435.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 5466155 hslO 4362587 hslO Rhodopseudomonas palustris BisA53 Hsp33-like chaperonin YP_783781.1 5465154 R 316055 CDS YP_783782.1 115526871 4362588 complement(5466392..5467330) 1 NC_008435.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 5467330 4362588 RPE_4883 Rhodopseudomonas palustris BisA53 ornithine carbamoyltransferase YP_783782.1 5466392 R 316055 CDS YP_783783.1 115526872 4362589 complement(5467330..5468544) 1 NC_008435.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 5468544 argD 4362589 argD Rhodopseudomonas palustris BisA53 acetylornithine transaminase protein YP_783783.1 5467330 R 316055 CDS YP_783784.1 115526873 4362590 5469011..5469520 1 NC_008435.1 PFAM: GcrA cell cycle regulator; KEGG: rpd:RPD_0894 GcrA cell cycle regulator; GcrA cell cycle regulator 5469520 4362590 RPE_4885 Rhodopseudomonas palustris BisA53 GcrA cell cycle regulator YP_783784.1 5469011 D 316055 CDS YP_783785.1 115526874 4362591 complement(5469761..5470465) 1 NC_008435.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4918 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5470465 4362591 RPE_4886 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_783785.1 5469761 R 316055 CDS YP_783786.1 115526875 4362592 complement(5470480..5471196) 1 NC_008435.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rpc:RPC_4919 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 5471196 4362592 RPE_4887 Rhodopseudomonas palustris BisA53 phosphate uptake regulator PhoU YP_783786.1 5470480 R 316055 CDS YP_783787.1 115526876 4362593 complement(5471214..5472041) 1 NC_008435.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 5472041 pstB 4362593 pstB Rhodopseudomonas palustris BisA53 phosphate transporter ATP-binding protein YP_783787.1 5471214 R 316055 CDS YP_783788.1 115526877 4362594 complement(5472038..5472883) 1 NC_008435.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0778 phosphate transport system permease protein 2; phosphate ABC transporter permease 5472883 4362594 RPE_4889 Rhodopseudomonas palustris BisA53 phosphate ABC transporter permease YP_783788.1 5472038 R 316055 CDS YP_783789.1 115526878 4362595 complement(5472886..5473884) 1 NC_008435.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_0777 phosphate ABC transporter, permease protein PstC; phosphate ABC transporter permease 5473884 4362595 RPE_4890 Rhodopseudomonas palustris BisA53 phosphate ABC transporter permease YP_783789.1 5472886 R 316055 CDS YP_783790.1 115526879 4362596 complement(5474158..5475171) 1 NC_008435.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: rpc:RPC_4923 periplasmic phosphate binding protein; periplasmic phosphate binding protein 5475171 4362596 RPE_4891 Rhodopseudomonas palustris BisA53 periplasmic phosphate binding protein YP_783790.1 5474158 R 316055 CDS YP_783791.1 115526880 4362597 complement(5475314..5476666) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4924 histidine kinase; histidine kinase 5476666 4362597 RPE_4892 Rhodopseudomonas palustris BisA53 histidine kinase YP_783791.1 5475314 R 316055 CDS YP_783792.1 115526881 4362598 complement(5476666..5477700) 1 NC_008435.1 KEGG: rpc:RPC_4925 hypothetical protein; hypothetical protein 5477700 4362598 RPE_4893 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783792.1 5476666 R 316055 CDS YP_783793.1 115526882 4362599 complement(5477925..5478221) 1 NC_008435.1 KEGG: rpc:RPC_4926 hypothetical protein; hypothetical protein 5478221 4362599 RPE_4894 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783793.1 5477925 R 316055 CDS YP_783794.1 115526883 4362600 complement(5478224..5479621) 1 NC_008435.1 PFAM: OmpA/MotB domain protein; KEGG: rpc:RPC_4927 OmpA/MotB; OmpA/MotB domain-containing protein 5479621 4362600 RPE_4895 Rhodopseudomonas palustris BisA53 OmpA/MotB domain-containing protein YP_783794.1 5478224 R 316055 CDS YP_783795.1 115526884 4362601 5479785..5480843 1 NC_008435.1 PFAM: polysaccharide deacetylase; KEGG: rpc:RPC_4928 polysaccharide deacetylase; polysaccharide deacetylase 5480843 4362601 RPE_4896 Rhodopseudomonas palustris BisA53 polysaccharide deacetylase YP_783795.1 5479785 D 316055 CDS YP_783796.1 115526885 4362602 complement(5480989..5482851) 1 NC_008435.1 molecular chaperone; heat shock protein 90 5482851 4362602 RPE_4897 Rhodopseudomonas palustris BisA53 heat shock protein 90 YP_783796.1 5480989 R 316055 CDS YP_783797.1 115526886 4362603 complement(5482929..5484281) 1 NC_008435.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: rpc:RPC_4931 periplasmic sensor signal transduction histidine kinase; periplasmic sensor signal transduction histidine kinase 5484281 4362603 RPE_4898 Rhodopseudomonas palustris BisA53 periplasmic sensor signal transduction histidine kinase YP_783797.1 5482929 R 316055 CDS YP_783798.1 115526887 4362604 complement(5484278..5484943) 1 NC_008435.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rpc:RPC_4932 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5484943 4362604 RPE_4899 Rhodopseudomonas palustris BisA53 two component transcriptional regulator YP_783798.1 5484278 R 316055 CDS YP_783799.1 115526888 4362605 complement(5484943..5485308) 1 NC_008435.1 PFAM: Propeptide, PepSY amd peptidase M4; KEGG: rpc:RPC_4933 propeptide, PepSY amd peptidase M4; peptidase 5485308 4362605 RPE_4900 Rhodopseudomonas palustris BisA53 peptidase YP_783799.1 5484943 R 316055 CDS YP_783800.1 115526889 4362606 5485482..5486063 1 NC_008435.1 PFAM: cytochrome B561; KEGG: rpd:RPD_0923 cytochrome b561; cytochrome B561 5486063 4362606 RPE_4901 Rhodopseudomonas palustris BisA53 cytochrome B561 YP_783800.1 5485482 D 316055 CDS YP_783801.1 115526890 4362607 5486420..5486905 1 NC_008435.1 hypothetical protein 5486905 4362607 RPE_4902 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783801.1 5486420 D 316055 CDS YP_783802.1 115526891 4362608 5486972..5487304 1 NC_008435.1 KEGG: rpc:RPC_4934 hypothetical protein; hypothetical protein 5487304 4362608 RPE_4903 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783802.1 5486972 D 316055 CDS YP_783803.1 115526892 4362609 complement(5487378..5487947) 1 NC_008435.1 KEGG: rpc:RPC_4628 hypothetical protein; hypothetical protein 5487947 4362609 RPE_4904 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783803.1 5487378 R 316055 CDS YP_783804.1 115526893 4362610 complement(5488261..5488851) 1 NC_008435.1 hypothetical protein 5488851 4362610 RPE_4905 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783804.1 5488261 R 316055 CDS YP_783805.1 115526894 4362611 complement(5488953..5490062) 1 NC_008435.1 isomerizes methylthioribose-1-phosphate into methylthioribulose-1-phosphate; involved in methionine salvage pathway; methylthioribose-1-phosphate isomerase 5490062 mtnA 4362611 mtnA Rhodopseudomonas palustris BisA53 methylthioribose-1-phosphate isomerase YP_783805.1 5488953 R 316055 CDS YP_783806.1 115526895 4362612 complement(5490070..5490945) 1 NC_008435.1 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate; 5'-methylthioadenosine phosphorylase 5490945 4362612 RPE_4907 Rhodopseudomonas palustris BisA53 5'-methylthioadenosine phosphorylase YP_783806.1 5490070 R 316055 CDS YP_783807.1 115526896 4362613 5491170..5492324 1 NC_008435.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: rpa:RPA4822 possible alcohol dehydrogenase; iron-containing alcohol dehydrogenase 5492324 4362613 RPE_4908 Rhodopseudomonas palustris BisA53 iron-containing alcohol dehydrogenase YP_783807.1 5491170 D 316055 CDS YP_783808.1 115526897 4362614 complement(5492450..5493676) 1 NC_008435.1 KEGG: bja:blr0529 hypothetical protein; hypothetical protein 5493676 4362614 RPE_4909 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783808.1 5492450 R 316055 CDS YP_783809.1 115526898 4362615 complement(5493828..5495078) 1 NC_008435.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:blr0530 hypothetical protein; TRAP transporter solute receptor TAXI family protein 5495078 4362615 RPE_4910 Rhodopseudomonas palustris BisA53 TRAP transporter solute receptor TAXI family protein YP_783809.1 5493828 R 316055 CDS YP_783810.1 115526899 4362616 5495807..5497357 1 NC_008435.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 5497357 4362616 RPE_4911 Rhodopseudomonas palustris BisA53 acyl-CoA synthetase YP_783810.1 5495807 D 316055 CDS YP_783811.1 115526900 4362617 5497749..5499602 1 NC_008435.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; KEGG: rpd:RPD_4412 ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase RecQ 5499602 4362617 RPE_4912 Rhodopseudomonas palustris BisA53 ATP-dependent DNA helicase RecQ YP_783811.1 5497749 D 316055 CDS YP_783812.1 115526901 4362618 5499748..5499978 1 NC_008435.1 TIGRFAM: putative regulatory protein, FmdB family; KEGG: rpb:RPB_4703 hypothetical protein; FmdB family regulatory protein 5499978 4362618 RPE_4913 Rhodopseudomonas palustris BisA53 FmdB family regulatory protein YP_783812.1 5499748 D 316055 CDS YP_783813.1 115526902 4362619 complement(5500112..5500390) 1 NC_008435.1 KEGG: rpa:RPA4828 hypothetical protein; hypothetical protein 5500390 4362619 RPE_4914 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783813.1 5500112 R 316055 CDS YP_783814.1 115526903 4362620 complement(5500596..5501693) 1 NC_008435.1 KEGG: rpc:RPC_4938 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; response regulator receiver modulated metal dependent phosphohydrolase 5501693 4362620 RPE_4915 Rhodopseudomonas palustris BisA53 response regulator receiver modulated metal dependent phosphohydrolase YP_783814.1 5500596 R 316055 CDS YP_783815.1 115526904 4362621 5501888..5502259 1 NC_008435.1 KEGG: rpb:RPB_4707 hypothetical protein; hypothetical protein 5502259 4362621 RPE_4916 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783815.1 5501888 D 316055 CDS YP_783816.1 115526905 4362622 complement(5502285..5503007) 1 NC_008435.1 PFAM: polysaccharide export protein; KEGG: rpc:RPC_4940 polysaccharide export protein; polysaccharide export protein 5503007 4362622 RPE_4917 Rhodopseudomonas palustris BisA53 polysaccharide export protein YP_783816.1 5502285 R 316055 CDS YP_783817.1 115526906 4362623 complement(5503201..5503857) 1 NC_008435.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 5503857 4362623 RPE_4918 Rhodopseudomonas palustris BisA53 methionine sulfoxide reductase A YP_783817.1 5503201 R 316055 CDS YP_783818.1 115526907 4362624 complement(5504032..5504349) 1 NC_008435.1 KEGG: rpc:RPC_4942 hypothetical protein; hypothetical protein 5504349 4362624 RPE_4919 Rhodopseudomonas palustris BisA53 hypothetical protein YP_783818.1 5504032 R 316055 CDS YP_783819.1 115526908 4362625 5504674..5504940 1 NC_008435.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 5504940 rpsT 4362625 rpsT Rhodopseudomonas palustris BisA53 30S ribosomal protein S20 YP_783819.1 5504674 D 316055 CDS